BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1863
(425 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|256075180|ref|XP_002573898.1| tetratricopeptide repeat protein 10 tpr10 [Schistosoma mansoni]
Length = 704
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 189/296 (63%), Gaps = 11/296 (3%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EE+ + ME+ + L++ESC+ A + ALEKAK AS KERVL + +EQ G AD N++
Sbjct: 139 EERIKNMEKRVNHLVEESCVAACQGEITLALEKAKEASRKERVLARQREQLGVADQINLD 198
Query: 65 LTFS---NINRKKNARAVRNDALSQ----LHREMKHEAEKCILTSAKLIAPSIEDNFSNG 117
LT+S N+ + A + +AL+ + +MK +AE I +AK+IAP IE NFS G
Sbjct: 199 LTYSVLFNLANRYTANGMYQEALNTYQTIVRNKMKVQAENFIKMAAKIIAPVIESNFSTG 258
Query: 118 YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLS 173
Y+WC+ ++ S++ +A DLEI+KAV FL+ D QA+D LKS + + SAATNLS
Sbjct: 259 YDWCIDHVKMSSYHEIAHDLEIDKAVMFLKQRDFHQAIDTLKSFERKDTRVACSAATNLS 318
Query: 174 FIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATC 233
F+YFL+G++ QAEK A++A + D YN AA VN GN ++ Y + ++ Y AL +D C
Sbjct: 319 FLYFLEGDLLQAEKYADQALSVDRYNPAALVNKGNVLYQQQQYERARDCYAEALQDDTRC 378
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+EALYNLGL K L Y ++LE F KL +++ + V+YQ+ +YE GD QA +
Sbjct: 379 VEALYNLGLVCKQLERYEEALEAFFKLYSVLRNSAPVVYQLMDIYEKLGDSTQAQE 434
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 16/133 (12%)
Query: 270 VLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPS 329
VL+ +A+ Y G ++A + + + VRN +MK +AE I +AK+IAP
Sbjct: 203 VLFNLANRYTANGMYQEALNTYQTI----VRN--------KMKVQAENFIKMAAKIIAPV 250
Query: 330 IEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS--- 386
IE NFS GY+WC+ ++ S++ +A DLEI+KAV FL+ D QA+D LKS + +
Sbjct: 251 IESNFSTGYDWCIDHVKMSSYHEIAHDLEIDKAVMFLKQRDFHQAIDTLKSFERKDTRVA 310
Query: 387 -SAATNLSFIYFL 398
SAATNLSF+YFL
Sbjct: 311 CSAATNLSFLYFL 323
>gi|321451357|gb|EFX63038.1| hypothetical protein DAPPUDRAFT_308631 [Daphnia pulex]
Length = 802
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 154/214 (71%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A+ ND+L +L R+ K E E+CIL +AKLI+P IED FS GY WCV++I+ S H+ LA DL
Sbjct: 344 ALNNDSLHRLERQAKFEGERCILMAAKLISPVIEDTFSVGYQWCVEAIKESTHNHLADDL 403
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAV FLR DV+ A + L+S ++ M ++AA NLS IY+LQG++ AEK AE A
Sbjct: 404 EINKAVLFLRQKDVALATETLRSFEKRSSRMATNAAVNLSTIYYLQGDIASAEKYAEVAR 463
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN+AAFV LGNC++ R DY K ++ ++ ALDNDA C+EALYNLGL ++ N+ S
Sbjct: 464 DSDPYNAAAFVCLGNCSLRRADYNKARDFFLFALDNDAACVEALYNLGLTYRSTNQLEKS 523
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LE F KLQ ++ PEVL+Q+ASL E G+ EQA
Sbjct: 524 LEQFVKLQMVLRHQPEVLFQVASLNEELGNDEQA 557
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 23/185 (12%)
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI---------------- 280
+ N+GL + +Y+D+ F + P L+ + S Y +
Sbjct: 264 MQNIGLLFIKMGQYNDACTSFEFVMQEKPDFKTGLHMVLSYYALADRENMRKSFLRLLDV 323
Query: 281 ---TGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNG 337
+ D ++ D N L EA+ ND+L +L R+ K E E+CIL +AKLI+P IED FS G
Sbjct: 324 RAESDDFDKLGDAQWNSLREALNNDSLHRLERQAKFEGERCILMAAKLISPVIEDTFSVG 383
Query: 338 YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLS 393
Y WCV++I+ S H+ LA DLEINKAV FLR DV+ A + L+S ++ M ++AA NLS
Sbjct: 384 YQWCVEAIKESTHNHLADDLEINKAVLFLRQKDVALATETLRSFEKRSSRMATNAAVNLS 443
Query: 394 FIYFL 398
IY+L
Sbjct: 444 TIYYL 448
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADS 60
++ PE++ + +E I +I+ES + ++F+ AL+KAK A NKER LI+ +EQ G +S
Sbjct: 108 VDPPEKQMKMLESSIHQIIEESIVAHSKEEFRVALDKAKEAVNKERSLIRQKEQSGMGES 167
Query: 61 HNIELTF 67
N +L F
Sbjct: 168 -NSDLAF 173
>gi|260823344|ref|XP_002604143.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
gi|229289468|gb|EEN60154.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
Length = 819
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 153/216 (70%), Gaps = 5/216 (2%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNS-AHSSLAQDL 137
+RND L Q+ RE K AEKCI+ +AK+IAP+IE +F+ GY+WCV+ ++ S + +A DL
Sbjct: 359 IRNDTLRQMEREKKTYAEKCIMAAAKVIAPAIESSFAAGYDWCVEQVKTSPSFLEMANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+ +L+ D +QAV+ LKS ++ + S+AATNLSF+YFL+ E+ QA+K AE A
Sbjct: 419 EINKAIMYLKQKDFNQAVETLKSFEKKDSKVASTAATNLSFLYFLENEIGQADKYAEVAM 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
TAD YN +A VN GNC + ++ + +E Y AL ND+TC EALYNLGL +K + DS
Sbjct: 479 TADRYNPSALVNKGNCVFMQGEHERAREFYQEALRNDSTCTEALYNLGLTYKKIGRLEDS 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L+CF KL AI+ + +V+YQIA LY++ D QA++
Sbjct: 539 LDCFLKLHAILRNSAQVIYQIADLYDLLEDTAQATE 574
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 121/229 (52%), Gaps = 35/229 (15%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + +Y K + Y ALD T + N+ L + +YSD++
Sbjct: 236 VNMGNIYFKQRNYAKAIKFYRMALDQVPTAHKEMRARIMQNIALVFIRMGQYSDAVTTLE 295
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ P + + + Y GD E+ D + N+
Sbjct: 296 HVMNEKPDF-KSGFNLILCYFALGDREKMKKTFQRLLNCALNIDDEDKYLPHPDDKHYNM 354
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNS-AHSSL 353
+LE +RND L Q+ RE K AEKCI+ +AK+IAP+IE +F+ GY+WCV+ ++ S + +
Sbjct: 355 ILEVIRNDTLRQMEREKKTYAEKCIMAAAKVIAPAIESSFAAGYDWCVEQVKTSPSFLEM 414
Query: 354 AQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
A DLEINKA+ +L+ D +QAV+ LKS + ++ S+AATNLSF+YFL
Sbjct: 415 ANDLEINKAIMYLKQKDFNQAVETLKSFEKKDSKVASTAATNLSFLYFL 463
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 31/225 (13%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E++++ L++ESC+ +F ALEKAK A +ER L++ +EQ + N+
Sbjct: 133 PEEKVKQLEKKVMELVEESCMANSRAEFSLALEKAKEAGRQERQLVRQREQLASGEQINL 192
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNW 120
+LT+S N+ + A + N+AL+ +K++ + ++A + ++ + + N+
Sbjct: 193 DLTYSVLFNLANQYAANEMYNEALNTYTVIVKNK----MFSNAGRLRVNMGNIYFKQRNY 248
Query: 121 --CVQSIR------NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC--DEMTSSAAT 170
++ R +AH + + N A+ F+RM S AV L+ ++ +
Sbjct: 249 AKAIKFYRMALDQVPTAHKEMRARIMQNIALVFIRMGQYSDAVTTLEHVMNEKPDFKSGF 308
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMARED 215
NL YF G+ E+ +K F L NCA+ +D
Sbjct: 309 NLILCYFALGDREKMKK--------------TFQRLLNCALNIDD 339
>gi|432931295|ref|XP_004081644.1| PREDICTED: LOW QUALITY PROTEIN: intraflagellar transport protein 88
homolog [Oryzias latipes]
Length = 840
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 152/214 (71%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ R+ K +AEK I+T+AKLIAP+IE +F++G++WCV ++ S + LA DL
Sbjct: 357 AIKNDKLYQMERDKKAQAEKYIMTAAKLIAPAIETSFASGFDWCVDMVKASQYVELANDL 416
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK+ ++ + S AATNLSFIYFL+ + +QA++ A+ A
Sbjct: 417 EINKAITYLRQKDFNQAVETLKTFEKKDSRVKSVAATNLSFIYFLEKDYDQADRYADLAM 476
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
A+ YN AA VN GN ++DY K E + AL ND++C E LYNLGL +K LN D+
Sbjct: 477 NANRYNPAALVNKGNTVFVKQDYEKAAEFFKEALKNDSSCTEGLYNLGLTYKRLNRLEDA 536
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +V+ QIA LYE GD++QA
Sbjct: 537 LDCFLKLNAILRNSDQVMCQIADLYEQLGDLQQA 570
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN +++Y K + Y ALD + I+ + N+G+ + +YSD++ F
Sbjct: 235 VNMGNIYFQQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFLRMGQYSDAITSFE 294
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ P++ Y + TGD E D + N+
Sbjct: 295 HIMRESPNI-TTGYNLVLCNYATGDREGMKKAFQMLISVPLGIDDEDKYIPATDDSSTNM 353
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+++A++ND L Q+ R+ K +AEK I+T+AKLIAP+IE +F++G++WCV ++ S + LA
Sbjct: 354 VIDAIKNDKLYQMERDKKAQAEKYIMTAAKLIAPAIETSFASGFDWCVDMVKASQYVELA 413
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK+ ++ + S AATNLSFIYFL
Sbjct: 414 NDLEINKAITYLRQKDFNQAVETLKTFEKKDSRVKSVAATNLSFIYFL 461
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 31/204 (15%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + ME+++ LI+ESC+ + + ALEKAK A KE+ L++ +EQ G AD N+
Sbjct: 132 PEEKIKIMEKKVNDLIEESCMAYSSGASQLALEKAKEARRKEQALVRQREQSGTADHINL 191
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEA---EKCILTSAKLIAPS-IEDNFSN--- 116
+LT+S + N A H EM EA + I+ + P ++ N N
Sbjct: 192 DLTYS---------VLLNLANQYEHNEMYPEALNTYQVIVKNKMFNNPGRLKVNMGNIYF 242
Query: 117 ---GYNWCVQSIR------NSAHSSLAQDLEINKAVTFLRMNDVSQAVD----VLKSCDE 163
Y ++ R ++AH + + N V FLRM S A+ +++
Sbjct: 243 QQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFLRMGQYSDAITSFEHIMRESPN 302
Query: 164 MTSSAATNLSFIYFLQGEVEQAEK 187
+T+ NL + G+ E +K
Sbjct: 303 ITT--GYNLVLCNYATGDREGMKK 324
>gi|380011006|ref|XP_003689605.1| PREDICTED: LOW QUALITY PROTEIN: intraflagellar transport protein 88
homolog [Apis florea]
Length = 794
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 168/255 (65%), Gaps = 12/255 (4%)
Query: 48 LIKLQEQFGHADSHNI---ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAK 104
L+++Q D +NI ++ F+ +N ++ND LS+L +E+K EAE+ IL +AK
Sbjct: 319 LLEVQLNIDQEDRYNISTDDVAFNILNE-----XLKNDDLSKLEKELKSEAERTILCAAK 373
Query: 105 LIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD-- 162
LIAP IED + G+ WCV +I++SA+ LA DLEINKA+ FL D A+D LK +
Sbjct: 374 LIAPVIEDTLTAGFAWCVDTIKSSAYGLLAADLEINKAMVFLHNRDTQLAIDTLKIFENR 433
Query: 163 --EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
+ SSAAT LSFIYFLQG+ +QAEK E A AD+YN+AA+VNL CA+ + + +
Sbjct: 434 ESKANSSAATMLSFIYFLQGDFDQAEKCGEIARNADSYNAAAYVNLSACAIKKGELNIAR 493
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
EL + ALD DA+ I+ALYNLGL +K N Y ++LECF K++ IV P+ +YQI LY++
Sbjct: 494 ELLLCALDTDASHIQALYNLGLVYKKQNMYEEALECFWKVRNIVRHDPQTVYQIGQLYQL 553
Query: 281 TGDVEQASDVNENLL 295
D++QA+D LL
Sbjct: 554 MDDIDQATDWYNQLL 568
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 201/410 (49%), Gaps = 95/410 (23%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E++I+ LI+ S A + K ALE+A+ AS++ER LI+LQEQ G +D+HN+
Sbjct: 122 PEEKIKVAEKKIMDLIESSVEAAYKNNTKVALERAREASSRERTLIRLQEQAGLSDNHNV 181
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A + M EA IA Q
Sbjct: 182 DLTFA---------VIFNLATQYTNNNMFTEA----------IA-------------TYQ 209
Query: 124 SI-RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSF 174
+I RN S+ A+ L++N +++M +SQA+ + + + +A N+
Sbjct: 210 AITRNRMFSNSAR-LKVNMGNIYVKMGQLSQAIKMYRMAFDQAPAAHKDLRIKIMHNIGM 268
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
++ G +E+A NS +V R ++ G +HA+
Sbjct: 269 LFVQMGRLEEAA------------NSFEWV-----MKERPEFKAG----LHAV------- 300
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI--ASLYEITGDVEQASDVNE 292
L + L+H+ K++ + EV I Y I+ D DV
Sbjct: 301 --LCHFALSHRD------------KMKRSFLELLEVQLNIDQEDRYNISTD-----DVAF 341
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSS 352
N+L E ++ND LS+L +E+K EAE+ IL +AKLIAP IED + G+ WCV +I++SA+
Sbjct: 342 NILNEXLKNDDLSKLEKELKSEAERTILCAAKLIAPVIEDTLTAGFAWCVDTIKSSAYGL 401
Query: 353 LAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
LA DLEINKA+ FL D A+D LK + + SSAAT LSFIYFL
Sbjct: 402 LAADLEINKAMVFLHNRDTQLAIDTLKIFENRESKANSSAATMLSFIYFL 451
>gi|77021665|gb|ABA60691.1| polaris [Danio rerio]
Length = 824
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 150/214 (70%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP+IE +F+ G++WCV ++ S + LA DL
Sbjct: 359 AIKNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D QAV+ LK ++ + S+AATNLSF+YFL+ + +QA++ AE A
Sbjct: 419 EINKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDFDQADRYAELAM 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+AD YN AA +N GN +EDY K E Y +L ND++C EALYNLGL +K L ++
Sbjct: 479 SADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLEEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +V+YQ+A+LYE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQA 572
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+ N +++Y K + Y ALD ++A I+ + N+G+ H+ +YSD++ F
Sbjct: 237 VNMANIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFIHMGQYSDAITPFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ P++ I Y I GD E+ D + N+
Sbjct: 297 YIMTESPNIKTGFNLILCYYAI-GDRERMKKAFQKLICVPLGVDDNDKYIPPNDDPHANM 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+TSAKLIAP+IE +F+ G++WCV ++ S + LA
Sbjct: 356 VIEAIKNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D QAV+ LK ++ + S+AATNLSF+YFL
Sbjct: 416 NDLEINKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFL 463
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 21/199 (10%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E+++ LI++SC+ D + +LEKAK A KER L++ +EQ G AD N+
Sbjct: 134 PEEKIKILEKKVNDLIEDSCLAHARGDLQVSLEKAKEAGRKERALVRQREQTGTADHINL 193
Query: 64 ELTFSNINRKKNARAVRNDALSQ--------LHREMKHEAEKCILTSAKLIAPSIEDNFS 115
+LT+S + N A ND ++ + +M + A + + A + + N++
Sbjct: 194 DLTYSVLFNLANQYA-NNDMYTEALNTYQVIVKNKMFNNAGRLKVNMANIYFK--QKNYT 250
Query: 116 NG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSA---- 168
Y + I N AH+++ + N V F+ M S A+ + MT S
Sbjct: 251 KAIKFYRMALDQISN-AHNAMRIKIMQNIGVVFIHMGQYSDAITPFEYI--MTESPNIKT 307
Query: 169 ATNLSFIYFLQGEVEQAEK 187
NL Y+ G+ E+ +K
Sbjct: 308 GFNLILCYYAIGDRERMKK 326
>gi|190338004|gb|AAI62512.1| Intraflagellar transport 88 homolog [Danio rerio]
Length = 824
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 150/214 (70%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP+IE +F+ G++WCV ++ S + LA DL
Sbjct: 359 AIKNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D QAV+ LK ++ + S+AATNLSF+YFL+ + +QA++ AE A
Sbjct: 419 EINKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDFDQADRYAELAM 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+AD YN AA +N GN +EDY K E Y +L ND++C EALYNLGL +K L ++
Sbjct: 479 SADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLEEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +V+YQ+A+LYE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQA 572
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+ N +++Y K + Y ALD ++A I+ + N+G+ H+ +YSD++ F
Sbjct: 237 VNMANIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFIHMGQYSDAITSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ P++ I Y I GD E+ D + N+
Sbjct: 297 YIMTESPNIKTGFNLILCYYAI-GDRERMKKAFQKLICVPLGVDDDDKYIPPNDDPHANM 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+TSAKLIAP+IE +F+ G++WCV ++ S + LA
Sbjct: 356 VIEAIKNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D QAV+ LK ++ + S+AATNLSF+YFL
Sbjct: 416 NDLEINKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFL 463
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 21/199 (10%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E+++ LI++SC+ D + +LEKAK A KER L++ +EQ G AD N+
Sbjct: 134 PEEKIKILEKKVNDLIEDSCLAHARGDLQVSLEKAKEAGRKERALVRQREQTGTADHINL 193
Query: 64 ELTFSNINRKKNARAVRNDALSQ--------LHREMKHEAEKCILTSAKLIAPSIEDNFS 115
+LT+S + N A ND ++ + +M + A + + A + + N++
Sbjct: 194 DLTYSVLFNLANQYA-NNDMYTEALNTYQVIVKNKMFNNAGRLKVNMANIYFK--QKNYT 250
Query: 116 NG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSA---- 168
Y + I N AH+++ + N V F+ M S A+ + MT S
Sbjct: 251 KAIKFYRMALDQISN-AHNAMRIKIMQNIGVVFIHMGQYSDAITSFEYI--MTESPNIKT 307
Query: 169 ATNLSFIYFLQGEVEQAEK 187
NL Y+ G+ E+ +K
Sbjct: 308 GFNLILCYYAIGDRERMKK 326
>gi|291190309|ref|NP_001167232.1| intraflagellar transport protein 88 homolog [Salmo salar]
gi|223648786|gb|ACN11151.1| Intraflagellar transport protein 88 homolog [Salmo salar]
Length = 845
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 151/214 (70%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP+IE F+ G++WCV +++S + LA DL
Sbjct: 357 AIKNDKLHQMERERKALAEKFIMTSAKLIAPAIEATFAAGFDWCVDMVKSSQYVELANDL 416
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D QAV+ LK+ ++ + S+AATNLSF+YFL+ + +QA++ A+ A
Sbjct: 417 EINKAITYLRQRDFKQAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAM 476
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
TAD YN AA +N GN ++DY K E Y AL ND++C EALYNLGL +K L +S
Sbjct: 477 TADRYNPAALINKGNTVFVKKDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEES 536
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +V++Q+A+L+E+ D QA
Sbjct: 537 LDCFLKLHAILRNSAQVMWQLANLFEMLEDPHQA 570
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+ N +++Y K +LY ALD + I+ + N+G+ + +YSD++ F
Sbjct: 235 VNMANIHFKQKNYPKAIKLYRMALDQISNSHKEMRIKIMQNIGVVFIRMGQYSDAITSFE 294
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ + P++ I Y I GD E+ D + NL
Sbjct: 295 HIMSESPNIKTGFNLILCYYAI-GDRERMKKAFQKLICVPLGIDEEDKYIPPNDDTHANL 353
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+TSAKLIAP+IE F+ G++WCV +++S + LA
Sbjct: 354 VIEAIKNDKLHQMERERKALAEKFIMTSAKLIAPAIEATFAAGFDWCVDMVKSSQYVELA 413
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D QAV+ LK+ ++ + S+AATNLSF+YFL
Sbjct: 414 NDLEINKAITYLRQRDFKQAVETLKTFEKKDSRVKSAAATNLSFLYFL 461
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 37/207 (17%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
P+EK + +E+++ LI+ESC+ + D + +L++AK A KER L++ +EQ G+AD N+
Sbjct: 132 PDEKVKILEKKVNDLIEESCLAHGHGDLQLSLDRAKEAGRKERALVRQREQSGNADHINL 191
Query: 64 ELTFSNI--------NRKKNARA-------VRNDALSQLHREMK------HEAEKCILTS 102
+LT+S + N A A V+N S R +K H +K +
Sbjct: 192 DLTYSVLFNLATQYANNDMYAEALNTYQVIVKNKMFSNAGR-LKVNMANIHFKQKNYPKA 250
Query: 103 AKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD 162
KL Y + I NS H + + N V F+RM S A+ +
Sbjct: 251 IKL------------YRMALDQISNS-HKEMRIKIMQNIGVVFIRMGQYSDAITSFEHIM 297
Query: 163 EMTSSAATNLSFI--YFLQGEVEQAEK 187
+ + T + I Y+ G+ E+ +K
Sbjct: 298 SESPNIKTGFNLILCYYAIGDRERMKK 324
>gi|51783969|ref|NP_001001725.1| intraflagellar transport protein 88 homolog [Danio rerio]
gi|45479854|gb|AAS66768.1| Ift88 [Danio rerio]
Length = 824
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 150/214 (70%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP+IE +F+ G++WCV ++ S + LA DL
Sbjct: 359 AIKNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D QAV+ LK ++ + S+AATNLSF+YFL+ + +QA++ AE A
Sbjct: 419 EINKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDFDQADRYAELAM 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+AD YN AA +N GN +EDY K E Y +L ND++C EALYNLGL +K L ++
Sbjct: 479 SADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLEEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +V+YQ+A+LYE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQA 572
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+ N +++Y K + Y ALD ++A I+ + N+G+ H+ +YSD++ F
Sbjct: 237 VNMANIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFIHMGQYSDAITSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ P++ I Y I GD E+ D + N+
Sbjct: 297 YIMTESPNIKTGFNLILCYYAI-GDRERMKKAFQKLICVPLGVDDDDKYIPPNDDPHANM 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+TSAKLIAP+IE +F+ G++WCV ++ S + LA
Sbjct: 356 VIEAIKNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D QAV+ LK ++ + S+AATNLSF+YFL
Sbjct: 416 NDLEINKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFL 463
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 21/199 (10%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E+++ LI++SC+ D + +LEKAK A KER L++ +EQ G AD N+
Sbjct: 134 PEEKIKILEKKVNDLIEDSCLAHARGDLQVSLEKAKEAGRKERALVRQREQTGTADHINL 193
Query: 64 ELTFSNINRKKNARAVRNDALSQ--------LHREMKHEAEKCILTSAKLIAPSIEDNFS 115
+LT+S + N A ND ++ + +M + A + + A + + N++
Sbjct: 194 DLTYSVLFNLANQYA-NNDMYTEALNTCQVIVKNKMFNNAGRLKVNMANIYFK--QKNYT 250
Query: 116 NG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSA---- 168
Y + I N AH+++ + N V F+ M S A+ + MT S
Sbjct: 251 KAIKFYRMALDQISN-AHNAMRIKIMQNIGVVFIHMGQYSDAITSFEYI--MTESPNIKT 307
Query: 169 ATNLSFIYFLQGEVEQAEK 187
NL Y+ G+ E+ +K
Sbjct: 308 GFNLILCYYAIGDRERMKK 326
>gi|348538306|ref|XP_003456633.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Oreochromis niloticus]
Length = 824
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 153/214 (71%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ R++K AEK I+T+AKLIAP+IE F+ G++WCV +++S + LA DL
Sbjct: 357 AIKNDKLHQMERDLKTLAEKYIMTAAKLIAPAIETLFATGFDWCVDMVKSSQYVELANDL 416
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK+ ++ + S+AATNLSF+YFL+ + +QA++ A+ A
Sbjct: 417 EINKAITYLRQKDFNQAVETLKAFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAM 476
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD YN AA +N GN +++Y K E Y AL ND++C E LYNLGL +K LN ++
Sbjct: 477 NADRYNPAALINKGNTVFVKQEYEKAAEFYKEALRNDSSCTEGLYNLGLTYKRLNRLEEA 536
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +V+YQ+ASLYE+ + EQA
Sbjct: 537 LDCFLKLHAILRNSSQVMYQLASLYELLENPEQA 570
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 198/400 (49%), Gaps = 75/400 (18%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E+++ LI+ESC+ + ALEKAK A KER L++ +EQ G AD N+
Sbjct: 132 PEEKIKILEKKVNDLIEESCMAQSMGALQVALEKAKEAGRKERALVRQREQSGSADHINL 191
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LT+S + N A + EM EA L S ++I + FSN V
Sbjct: 192 DLTYS---------VLLNLANQYTNNEMYPEA----LNSYQIIVKN--KMFSNAGRLKV- 235
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVD-VLKSCDEMTSSAATNLSFIYFLQGEV 182
N A+ Q KA+ F RM A+D + + EM N+ ++ G+
Sbjct: 236 ---NMANIYFKQK-NYPKAIKFYRM-----ALDQITNAHKEMRIKIMQNIGVVFICMGQ- 285
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
Y + H + +++ I+ +NL L
Sbjct: 286 ---------------------------------YTDAITSFEHIM-SESPNIKTGFNLIL 311
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND 302
+ + + + F KL ++ + + I S D + N+++EA++ND
Sbjct: 312 CYYAIGDRERMKKAFQKLISVPLGIDDEDKYIPS----------NEDTSSNMVIEAIKND 361
Query: 303 ALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKA 362
L Q+ R++K AEK I+T+AKLIAP+IE F+ G++WCV +++S + LA DLEINKA
Sbjct: 362 KLHQMERDLKTLAEKYIMTAAKLIAPAIETLFATGFDWCVDMVKSSQYVELANDLEINKA 421
Query: 363 VTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
+T+LR D +QAV+ LK+ ++ + S+AATNLSF+YFL
Sbjct: 422 ITYLRQKDFNQAVETLKAFEKKDSRVKSAAATNLSFLYFL 461
>gi|348538308|ref|XP_003456634.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Oreochromis niloticus]
Length = 846
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 153/214 (71%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ R++K AEK I+T+AKLIAP+IE F+ G++WCV +++S + LA DL
Sbjct: 357 AIKNDKLHQMERDLKTLAEKYIMTAAKLIAPAIETLFATGFDWCVDMVKSSQYVELANDL 416
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK+ ++ + S+AATNLSF+YFL+ + +QA++ A+ A
Sbjct: 417 EINKAITYLRQKDFNQAVETLKAFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAM 476
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD YN AA +N GN +++Y K E Y AL ND++C E LYNLGL +K LN ++
Sbjct: 477 NADRYNPAALINKGNTVFVKQEYEKAAEFYKEALRNDSSCTEGLYNLGLTYKRLNRLEEA 536
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +V+YQ+ASLYE+ + EQA
Sbjct: 537 LDCFLKLHAILRNSSQVMYQLASLYELLENPEQA 570
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 198/400 (49%), Gaps = 75/400 (18%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E+++ LI+ESC+ + ALEKAK A KER L++ +EQ G AD N+
Sbjct: 132 PEEKIKILEKKVNDLIEESCMAQSMGALQVALEKAKEAGRKERALVRQREQSGSADHINL 191
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LT+S + N A + EM EA L S ++I + FSN V
Sbjct: 192 DLTYS---------VLLNLANQYTNNEMYPEA----LNSYQIIVKN--KMFSNAGRLKV- 235
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVD-VLKSCDEMTSSAATNLSFIYFLQGEV 182
N A+ Q KA+ F RM A+D + + EM N+ ++ G+
Sbjct: 236 ---NMANIYFKQK-NYPKAIKFYRM-----ALDQITNAHKEMRIKIMQNIGVVFICMGQ- 285
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
Y + H + +++ I+ +NL L
Sbjct: 286 ---------------------------------YTDAITSFEHIM-SESPNIKTGFNLIL 311
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND 302
+ + + + F KL ++ + + I S D + N+++EA++ND
Sbjct: 312 CYYAIGDRERMKKAFQKLISVPLGIDDEDKYIPS----------NEDTSSNMVIEAIKND 361
Query: 303 ALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKA 362
L Q+ R++K AEK I+T+AKLIAP+IE F+ G++WCV +++S + LA DLEINKA
Sbjct: 362 KLHQMERDLKTLAEKYIMTAAKLIAPAIETLFATGFDWCVDMVKSSQYVELANDLEINKA 421
Query: 363 VTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
+T+LR D +QAV+ LK+ ++ + S+AATNLSF+YFL
Sbjct: 422 ITYLRQKDFNQAVETLKAFEKKDSRVKSAAATNLSFLYFL 461
>gi|328779761|ref|XP_394520.3| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Apis mellifera]
Length = 797
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 168/255 (65%), Gaps = 12/255 (4%)
Query: 48 LIKLQEQFGHADSHNI---ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAK 104
L+++Q D +NI ++ F+ +N ++ND LS+L +E+K EAE+ IL +AK
Sbjct: 319 LLEVQLNIDQEDRYNISTDDVAFNILNE-----ILKNDDLSKLEKELKSEAERTILCAAK 373
Query: 105 LIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD-- 162
LIAP IED + G+ WCV +I++SA+ LA DLEINKA+ FL D A+D LK +
Sbjct: 374 LIAPVIEDTLTAGFAWCVDTIKSSAYGLLAADLEINKAMVFLHNRDTQLAIDTLKIFENR 433
Query: 163 --EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
+ SSAAT LSFIYFLQG+ +QAEK E A AD+YN+AA+VNL CA+ + + +
Sbjct: 434 ESKANSSAATMLSFIYFLQGDYDQAEKCGEIARNADSYNAAAYVNLSACAIKKGELNIAR 493
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
EL + ALD DA+ I+ALYNLGL +K N Y ++LECF K++ IV P+ +YQI LY++
Sbjct: 494 ELLLCALDTDASHIQALYNLGLVYKKQNMYEEALECFWKVRNIVRHDPQTVYQIGQLYQL 553
Query: 281 TGDVEQASDVNENLL 295
D++QA+D LL
Sbjct: 554 MDDIDQATDWYNQLL 568
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 201/410 (49%), Gaps = 95/410 (23%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E++I+ LI+ S A + + ALE+A+ AS++ER LI+LQEQ G +D+HN+
Sbjct: 122 PEEKIKVAEKKIMDLIESSVEAAYENNTRVALERAREASSRERTLIRLQEQAGLSDNHNV 181
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A + M EA IA Q
Sbjct: 182 DLTFA---------VIFNLATQYTNNNMFTEA----------IA-------------TYQ 209
Query: 124 SI-RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSF 174
+I RN S+ A+ L++N +++M +SQA+ + + + +A N+
Sbjct: 210 AITRNRMFSNSAR-LKVNMGNIYVKMGQLSQAIKMYRMAFDQAPAAHKDLRIKIMHNIGM 268
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
++ G +E+A NS +V R ++ G +HA+
Sbjct: 269 LFVQMGRLEEAA------------NSFEWV-----MKERPEFKAG----LHAV------- 300
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI--ASLYEITGDVEQASDVNE 292
L + L+H+ K++ + EV I Y I+ D DV
Sbjct: 301 --LCHFALSHRD------------KMKRSFLELLEVQLNIDQEDRYNISTD-----DVAF 341
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSS 352
N+L E ++ND LS+L +E+K EAE+ IL +AKLIAP IED + G+ WCV +I++SA+
Sbjct: 342 NILNEILKNDDLSKLEKELKSEAERTILCAAKLIAPVIEDTLTAGFAWCVDTIKSSAYGL 401
Query: 353 LAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
LA DLEINKA+ FL D A+D LK + + SSAAT LSFIYFL
Sbjct: 402 LAADLEINKAMVFLHNRDTQLAIDTLKIFENRESKANSSAATMLSFIYFL 451
>gi|328720964|ref|XP_001942864.2| PREDICTED: intraflagellar transport protein 88 homolog
[Acyrthosiphon pisum]
Length = 733
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 151/216 (69%), Gaps = 4/216 (1%)
Query: 76 ARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 135
A A+++D+L++ +++K EK IL +A LI+ IED F+ GY+WC+ +I+ S +S LA
Sbjct: 224 AEAIKSDSLTKYEKQIKSNFEKTILNAAHLISSIIEDTFTEGYSWCLDTIKMSRYSYLAG 283
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEE 191
LEINKAV FL N+++ A+D LK+ D ++ S+AATNLSFI+FL+G++EQAE+ +
Sbjct: 284 HLEINKAVGFLYQNNIASAIDTLKAFDNKDSKVASAAATNLSFIHFLKGDLEQAERTSVA 343
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYS 251
AC D+ N A VN GNC ++DY K KELY AL+ D C EA+YNLGL +K L
Sbjct: 344 ACETDSLNGLACVNQGNCFFVKQDYYKAKELYTLALEKDMMCSEAMYNLGLTNKQLGHLD 403
Query: 252 DSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
D+++CF KL I+ + PEV+YQIA L E+ GD+EQA
Sbjct: 404 DAMDCFQKLHVIISNHPEVIYQIALLNEMIGDLEQA 439
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 106/188 (56%), Gaps = 27/188 (14%)
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY----------------EIT 281
+N+G+ L +Y D+ F + P+ ++ + Y EI+
Sbjct: 143 HNIGVIFLKLGKYEDACSNFEYIMHEKPTFKAGMHALVCYYMSGNKDKSKQLFKQMLEIS 202
Query: 282 GDVE-------QASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNF 334
D++ + ++ LL EA+++D+L++ +++K EK IL +A LI+ IED F
Sbjct: 203 LDIDFEDKYAANSDEIEATLLAEAIKSDSLTKYEKQIKSNFEKTILNAAHLISSIIEDTF 262
Query: 335 SNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAAT 390
+ GY+WC+ +I+ S +S LA LEINKAV FL N+++ A+D LK+ D ++ S+AAT
Sbjct: 263 TEGYSWCLDTIKMSRYSYLAGHLEINKAVGFLYQNNIASAIDTLKAFDNKDSKVASAAAT 322
Query: 391 NLSFIYFL 398
NLSFI+FL
Sbjct: 323 NLSFIHFL 330
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
E+K +++E+ I L++++C+ DF+ LEK+K ASNKER LI++QEQ G DSHNI+
Sbjct: 2 EDKIKKLEKRIHDLVNDACMAEARGDFQLGLEKSKDASNKERSLIRMQEQAGLNDSHNID 61
Query: 65 LTF 67
LTF
Sbjct: 62 LTF 64
>gi|291392959|ref|XP_002712851.1| PREDICTED: intraflagellar transport 88 homolog [Oryctolagus
cuniculus]
Length = 831
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 148/214 (69%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL++K LN S++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLSEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANVYELMEDPNQA 572
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAI-GDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQ----LHREMKHEAEKCILTSAKLIAPSIEDNFSN 116
+LT+S N+ + +A + +AL+ + +M A K + + + N+S
Sbjct: 194 DLTYSVLFNLANQYSANEMYTEALNTYQVIVKNKMFSNAGKLKMNMGNIYLK--QRNYSK 251
Query: 117 G---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AATN 171
Y + I S H + + N VTF++ S A++ + M + A N
Sbjct: 252 AIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAGFN 310
Query: 172 LSFIYFLQGEVEQAEK 187
L YF G+ E+ +K
Sbjct: 311 LILSYFAIGDQEKMKK 326
>gi|348583351|ref|XP_003477436.1| PREDICTED: intraflagellar transport protein 88 homolog [Cavia
porcellus]
Length = 825
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 190/337 (56%), Gaps = 19/337 (5%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMK 312
LECF KL AI+ + +VLYQIA++YE+ D QA + L+ + + ALS+L
Sbjct: 539 LECFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDSKALSKLGELYD 598
Query: 313 HEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK- 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 599 SEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ 658
Query: 362 ---AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFI 395
A F R + +A+D K A L F+
Sbjct: 659 LMVASCFRRSGNYQKALDTYKDIHRKFPENADCLRFL 695
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLNQRNYSKAIKFYRMALDQIPSVQKEMRIKIMQNIGVTFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAI-GDREKMKKAFQKLIAVPLEIDDDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 105/197 (53%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQIASPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNW 120
+LT+S N+ + +A + +AL+ +K++ + +++ + ++ + + N N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNSGRLKVNMGNIYLNQRNY 249
Query: 121 --CVQSIRNSAH--SSLAQDLEI----NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
++ R + S+ +++ I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQIPSVQKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAGF 309
Query: 171 NLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 310 NLILSYFAIGDREKMKK 326
>gi|390335042|ref|XP_782701.2| PREDICTED: intraflagellar transport protein 88 homolog
[Strongylocentrotus purpuratus]
Length = 816
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 145/216 (67%), Gaps = 4/216 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A+RND L Q R+ K EKC++ +AKLIAPSIE +FS GY+WCV ++ S + LA DL
Sbjct: 345 AIRNDGLRQAERKRKASMEKCVMAAAKLIAPSIEQSFSAGYDWCVDCVKQSNYIDLANDL 404
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+ +L+ + +QAV+VLK+ ++ S AA NLSFIYFLQG+V AEK AE A
Sbjct: 405 EINKALMYLKQKEFNQAVEVLKTFEKKESKCATVAAVNLSFIYFLQGDVAMAEKYAEVAM 464
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD YN A VN GNC + D K KE Y AL +A+C EALYNLGL +K L +
Sbjct: 465 AADRYNPPALVNKGNCVYVQGDLEKAKECYQEALRTEASCTEALYNLGLVNKKLGHLEPA 524
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L+CF KL AI+ + EV++QIAS+ E+ D+ QAS+
Sbjct: 525 LDCFLKLHAILRNNAEVIFQIASINEMLEDIPQASE 560
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + +Y K + Y ALD ++ + N+ + +Y+D++
Sbjct: 223 VNMGNIYYRQRNYPKAIKYYRMALDQVPNTHKRLKMKIMQNIANVFVKMGQYTDAVTSLE 282
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ A S + + Y TGD E+ D + N+
Sbjct: 283 HIMA-EKSDHATAFNLILCYYATGDREKMKKTFQRLLGVELNLDDEDKYLPHPDDKHANM 341
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+LEA+RND L Q R+ K EKC++ +AKLIAPSIE +FS GY+WCV ++ S + LA
Sbjct: 342 ILEAIRNDGLRQAERKRKASMEKCVMAAAKLIAPSIEQSFSAGYDWCVDCVKQSNYIDLA 401
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFL 398
DLEINKA+ +L+ + +QAV+VLK+ ++ S AA NLSFIYFL
Sbjct: 402 NDLEINKALMYLKQKEFNQAVEVLKTFEKKESKCATVAAVNLSFIYFL 449
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK +++E+++ LI+ESC +F AL+KAK A +ER L +++Q + + N++
Sbjct: 121 EEKVKQLEKQVNDLIEESCFAHSRGEFTLALDKAKEAGRQERRLGSVRDQLSNNEQVNLD 180
Query: 65 LTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNFS 115
LT+S N+ + A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 181 LTYSVLFNLANQYEANEMFTEALTTYQVIVKNK----MFSNAGRLKVNMGNIYYRQRNYP 236
Query: 116 NG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT-- 170
Y + + N+ H L + N A F++M + AV L+ S AT
Sbjct: 237 KAIKYYRMALDQVPNT-HKRLKMKIMQNIANVFVKMGQYTDAVTSLEHIMAEKSDHATAF 295
Query: 171 NLSFIYFLQGEVEQAEK 187
NL Y+ G+ E+ +K
Sbjct: 296 NLILCYYATGDREKMKK 312
>gi|390358043|ref|XP_790888.3| PREDICTED: intraflagellar transport protein 88 homolog, partial
[Strongylocentrotus purpuratus]
Length = 631
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 145/216 (67%), Gaps = 4/216 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A+RND L Q R+ K EKC++ +AKLIAPSIE +FS GY+WCV ++ S + LA DL
Sbjct: 311 AIRNDGLRQAERKRKASMEKCVMAAAKLIAPSIEQSFSAGYDWCVDCVKQSNYIDLANDL 370
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+ +L+ + +QAV+VLK+ ++ S AA NLSFIYFLQG+V AEK AE A
Sbjct: 371 EINKALMYLKQKEFNQAVEVLKTFEKKESKCATVAAVNLSFIYFLQGDVAMAEKYAEVAM 430
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD YN A VN GNC + D K KE Y AL +A+C EALYNLGL +K L +
Sbjct: 431 AADRYNPPALVNKGNCVYVQGDLEKAKECYQEALRTEASCTEALYNLGLVNKKLGHLEPA 490
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L+CF KL AI+ + EV++QIAS+ E+ D+ QAS+
Sbjct: 491 LDCFLKLHAILRNNAEVIFQIASINEMLEDIPQASE 526
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + +Y K + Y ALD ++ + N+ + +Y+D++
Sbjct: 189 VNMGNIYYRQRNYPKAIKYYRMALDQVPNTHKRLKMKIMQNIANVFVKMGQYTDAVTSLE 248
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ A S + + Y TGD E+ D + N+
Sbjct: 249 HIMA-EKSDHATAFNLILCYYATGDREKMKKTFQRLLGVELNLDDEDKYLPHPDDKHANM 307
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+LEA+RND L Q R+ K EKC++ +AKLIAPSIE +FS GY+WCV ++ S + LA
Sbjct: 308 ILEAIRNDGLRQAERKRKASMEKCVMAAAKLIAPSIEQSFSAGYDWCVDCVKQSNYIDLA 367
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFL 398
DLEINKA+ +L+ + +QAV+VLK+ ++ S AA NLSFIYFL
Sbjct: 368 NDLEINKALMYLKQKEFNQAVEVLKTFEKKESKCATVAAVNLSFIYFL 415
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK +++E+++ LI+ESC +F AL+KAK A +ER L +++Q + + N++
Sbjct: 87 EEKVKQLEKQVNDLIEESCFAHSRGEFTLALDKAKEAGRQERRLGSVRDQLSNNEQVNLD 146
Query: 65 LTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNFS 115
LT+S N+ + A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 147 LTYSVLFNLANQYEANEMFTEALTTYQVIVKNK----MFSNAGRLKVNMGNIYYRQRNYP 202
Query: 116 NG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT-- 170
Y + + N+ H L + N A F++M + AV L+ S AT
Sbjct: 203 KAIKYYRMALDQVPNT-HKRLKMKIMQNIANVFVKMGQYTDAVTSLEHIMAEKSDHATAF 261
Query: 171 NLSFIYFLQGEVEQAEK 187
NL Y+ G+ E+ +K
Sbjct: 262 NLILCYYATGDREKMKK 278
>gi|149598974|ref|XP_001516420.1| PREDICTED: intraflagellar transport protein 88 homolog
[Ornithorhynchus anatinus]
Length = 823
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 147/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ E K AEK I+T+AKLIAP+IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+TFLR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITFLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANNYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
++D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 SSDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA+LYEI D QA
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQA 572
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + +Y K + Y ALD + I+ L N+G+ +YSD++ F
Sbjct: 237 VNMGNIYFKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ + P++ I S + + GD E+ + D + NL
Sbjct: 297 HIMGMAPNLKAGFNLILSYFAV-GDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND L Q+ E K AEK I+T+AKLIAP+IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 LIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+TFLR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITFLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYTEALNTYQVIVKNK----MFSNAGRLKVNMGNIYFKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 309 FNLILSYFAVGDRERMKK 326
>gi|383865857|ref|XP_003708389.1| PREDICTED: intraflagellar transport protein 88 homolog [Megachile
rotundata]
Length = 797
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 150/221 (67%), Gaps = 4/221 (1%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
++ND LS+L +E+K EAEK IL +AKLIAP IED + G+ WCV SI++SA++SLA DLE
Sbjct: 347 LKNDDLSKLEKELKCEAEKTILCAAKLIAPVIEDTLTAGFAWCVDSIKSSAYASLAADLE 406
Query: 139 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
I+KA+ FL + A+D LK + + SSAAT LSFIYF QG+ +QAE+ E A T
Sbjct: 407 ISKAMVFLHNRETQLAIDTLKMFENRESKANSSAATMLSFIYFFQGDYDQAERCGEIART 466
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
ADTYN+AA+VNL CA + + KE + ALD DA ++ALYNLGL +K N Y ++L
Sbjct: 467 ADTYNAAAYVNLSACAFRKNELNIAKEFLLCALDTDAGHVQALYNLGLVYKKQNMYEEAL 526
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
ECF KL+ IV P+ LYQI LY++ D +QA + LL
Sbjct: 527 ECFWKLRNIVRHDPQTLYQIGHLYQLMNDTDQAMEWYNQLL 567
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 205/410 (50%), Gaps = 95/410 (23%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E++I+ LI+ S A + + ALE+A+ AS++E+VLI+LQEQ G +D+HN+
Sbjct: 121 PEEKIKVAEKKIMVLIESSIEAAYESNTRVALERAREASSREKVLIRLQEQAGLSDNHNV 180
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
ELTF+ + N A+ + M EA IA Q
Sbjct: 181 ELTFA---------VIFNLAIQYTNNNMFTEA----------IA-------------TYQ 208
Query: 124 SI-RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSF 174
+I RN ++ A+ L++N +++M +SQA+ + + + S+A N+
Sbjct: 209 AITRNRMFNNSAR-LKVNMGNIYVKMGQLSQAIKMYRMAFDQASAAHKDLRIKIMHNIGM 267
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
++ G +E+A NS +V R ++ G +HA+
Sbjct: 268 LFVQMGRLEEAA------------NSFEWV-----MKERAEFKAG----LHAV------- 299
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI--ASLYEITGDVEQASDVNE 292
L + L+H+ K++ + EV I Y I+ D DV
Sbjct: 300 --LCHFALSHRD------------KMKRAFLELLEVQLNIDQEDRYNISTD-----DVAS 340
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSS 352
N+L E ++ND LS+L +E+K EAEK IL +AKLIAP IED + G+ WCV SI++SA++S
Sbjct: 341 NILNEILKNDDLSKLEKELKCEAEKTILCAAKLIAPVIEDTLTAGFAWCVDSIKSSAYAS 400
Query: 353 LAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
LA DLEI+KA+ FL + A+D LK + + SSAAT LSFIYF
Sbjct: 401 LAADLEISKAMVFLHNRETQLAIDTLKMFENRESKANSSAATMLSFIYFF 450
>gi|281347136|gb|EFB22720.1| hypothetical protein PANDA_021839 [Ailuropoda melanoleuca]
Length = 520
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 228 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 287
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 288 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQASSYADLAV 347
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 348 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEA 407
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 408 LDCFLKLHAILRNSAQVLYQIANVYELMEDPNQA 441
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 106 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 165
Query: 259 KLQAIVPSMPEVLYQIASLYEITGD------------------------VEQASDVNENL 294
+ ++ P++ I S + + GD + + D + NL
Sbjct: 166 HIMSMAPNLKAGFNLILSYFAV-GDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 224
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 225 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 284
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 285 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 332
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 3 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 62
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 63 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 118
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A++ + M + A
Sbjct: 119 SKAIKFYRMALDQIP-SVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAG 177
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ ++ +K
Sbjct: 178 FNLILSYFAVGDRDKMKK 195
>gi|351706998|gb|EHB09917.1| Intraflagellar transport protein 88-like protein [Heterocephalus
glaber]
Length = 893
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 419 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 478
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 479 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 538
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 539 NSDRYNPSALTNKGNTVFANADYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 598
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LECF KL AI+ + +VLYQIA+++E+ D QA
Sbjct: 599 LECFLKLHAILRNSAQVLYQIANIHELMEDPNQA 632
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 297 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 356
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ D + NL
Sbjct: 357 HIMSMAPNLKAGFNLILSYFAI-GDREKMKKAFQKLIAVPLEIDDDDKYISPTDDPHTNL 415
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 416 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 475
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 476 NDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 523
>gi|355695674|gb|AES00089.1| intraflagellar transport 88-like protein [Mustela putorius furo]
Length = 785
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFSQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANVYELMEDPNQA 572
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGD------------------------VEQASDVNENL 294
+ ++ P++ I S + + GD + + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAV-GDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ ++ +K
Sbjct: 309 FNLILSYFAVGDRDKMKK 326
>gi|301617155|ref|XP_002938005.1| PREDICTED: intraflagellar transport protein 88 homolog [Xenopus
(Silurana) tropicalis]
Length = 826
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 148/214 (69%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ +E K AEK I+ +AKLIAP+IE +F++GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDNLRQMEQERKALAEKFIMMAAKLIAPAIETSFADGYDWCVEVVKTSQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D SQAV+ LK ++ + S+AATNLSF+YFL+ + QA+ A+ A
Sbjct: 419 EINKAITYLRQKDFSQAVETLKMFEKKDSRVKSAAATNLSFLYFLENDYSQADIYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+AD YN AA N GN +Y K E Y AL ND++C EALYNLGL +K LN ++
Sbjct: 479 SADRYNPAALTNKGNIDFINGEYEKAAEYYKEALRNDSSCTEALYNLGLTYKRLNRLEEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CFHKL AI+ + +VL QIA+LYE+ D QA
Sbjct: 539 LDCFHKLHAILRNSAQVLSQIAALYEMLEDPNQA 572
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 201/403 (49%), Gaps = 81/403 (20%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +ME+ + LI+ESCI DFK ALEKAK A KERVL++L+EQ ++ N+
Sbjct: 134 PEEKLRQMEKNVNELIEESCIANSRGDFKQALEKAKEAGRKERVLVRLREQVLSPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNW 120
+LT+S N+ + +A + +AL+ ++ K+ F++G
Sbjct: 194 DLTYSVLLNLANQYSANEMYTEALNTYQ----------VIVKNKM--------FNHGGRL 235
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC-DEMTSSAATNLSFIYFLQ 179
V N A+ L Q +KA+ F RM A+D + EM N+
Sbjct: 236 KV----NMANIYLKQK-NYSKAIKFYRM-----ALDQIPGVHQEMRIKIMQNI------- 278
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
AF+ G DY + H + N++ ++A +N
Sbjct: 279 --------------------GVAFIKTG-------DYADAITSFEHIM-NESPSLKAAFN 310
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
L L + + + + F KL + + + I D + NLL+EA+
Sbjct: 311 LILCYFAIGDRDKMKKAFQKLIDVPLGIDDEEKYIPP----------NDDPHTNLLIEAI 360
Query: 300 RNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEI 359
+ND L Q+ +E K AEK I+ +AKLIAP+IE +F++GY+WCV+ ++ S + LA DLEI
Sbjct: 361 KNDNLRQMEQERKALAEKFIMMAAKLIAPAIETSFADGYDWCVEVVKTSQYVELANDLEI 420
Query: 360 NKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
NKA+T+LR D SQAV+ LK ++ + S+AATNLSF+YFL
Sbjct: 421 NKAITYLRQKDFSQAVETLKMFEKKDSRVKSAAATNLSFLYFL 463
>gi|410947119|ref|XP_003980301.1| PREDICTED: intraflagellar transport protein 88 homolog [Felis
catus]
Length = 825
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANVYELMEDPNQA 572
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGD------------------------VEQASDVNENL 294
+ ++ P++ I S + + GD + + D + NL
Sbjct: 297 HIMSLAPNLKAGFNLILSYFAV-GDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KER+L++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERILVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A++ + + + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSLAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ ++ +K
Sbjct: 309 FNLILSYFAVGDRDKMKK 326
>gi|395520765|ref|XP_003764494.1| PREDICTED: intraflagellar transport protein 88 homolog [Sarcophilus
harrisii]
Length = 747
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 160/246 (65%), Gaps = 7/246 (2%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 273 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAIGYDWCVEVVKASQYVELANDL 332
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 333 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANSYADLAV 392
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 393 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 452
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND--ALSQLHREM 311
L+CF KL AI+ + +VLYQIA++YEI D Q+ + L+ V D ALS+L
Sbjct: 453 LDCFLKLHAILRNSAQVLYQIANVYEIMEDPNQSIEWLMQ-LISVVPTDSRALSKLGELY 511
Query: 312 KHEAEK 317
+E +K
Sbjct: 512 DNEGDK 517
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 151 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 210
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + + GD E+ + D + NL
Sbjct: 211 HIMSMAPNLKAGFNLILSYFAV-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 269
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 270 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAIGYDWCVEVVKASQYVELA 329
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 330 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 377
>gi|126327367|ref|XP_001366386.1| PREDICTED: intraflagellar transport protein 88 homolog [Monodelphis
domestica]
Length = 825
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAIGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YEI D Q+
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANVYEIMEDPNQS 572
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + + GD E+ + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAV-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAIGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 309 FNLILSYFAVGDREKMKK 326
>gi|326914341|ref|XP_003203484.1| PREDICTED: intraflagellar transport protein 88 homolog [Meleagris
gallopavo]
Length = 818
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 147/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND+L Q+ RE K AE I+T+AKLIAP IE +F+ GY+WCV++++ S + LA DL
Sbjct: 359 AIKNDSLRQIERERKSLAEDYIMTAAKLIAPVIETSFAVGYDWCVEAVKASHYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA T+LR D +QA++ LK ++ + S+AATNLSF+Y+L+ E+ QA A+ A
Sbjct: 419 EINKATTYLRQRDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQATNYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
++D YN AA N GN A EDY K E Y AL ND +C EALYNLGL +K LN ++
Sbjct: 479 SSDRYNPAALTNKGNTVFANEDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRTDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VL+QIA +YEI D QA
Sbjct: 539 LDCFLKLHAILGNSAQVLHQIADIYEIMEDPNQA 572
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+A +Y D++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYMDAISSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ ++ P++ + + + Y GD EQ D + NL
Sbjct: 297 HIMSLSPNL-KAGFNLIVCYFAIGDSEQMKKAFQKLIAVPLEVDYDDKYVSANDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND+L Q+ RE K AE I+T+AKLIAP IE +F+ GY+WCV++++ S + LA
Sbjct: 356 LIEAIKNDSLRQIERERKSLAEDYIMTAAKLIAPVIETSFAVGYDWCVEAVKASHYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA T+LR D +QA++ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKATTYLRQRDFNQALETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 21/198 (10%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++S N++
Sbjct: 135 EEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERVLVRQREQTATSESINLD 194
Query: 65 LTFS---NINRKKNARAVRNDALSQ----LHREMKHEAEKCILTSAKLIAPSIEDNFSNG 117
LT+S N+ + A + +AL+ + +M + + + + + N+S
Sbjct: 195 LTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFNNGGRLKVNMGNIYLK--QRNYSKA 252
Query: 118 ---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS-----SAA 169
Y + I S H + + N V F++ Q +D + S + + S A
Sbjct: 253 IKFYRMALDQI-PSVHKEMRIKIMQNIGVAFIK---TGQYMDAISSFEHIMSLSPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ EQ +K
Sbjct: 309 FNLIVCYFAIGDSEQMKK 326
>gi|431921001|gb|ELK18770.1| Intraflagellar transport protein 88 like protein [Pteropus alecto]
Length = 787
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 149/216 (68%), Gaps = 4/216 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP+IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ + QA A+ A
Sbjct: 418 EINKAITYLRQKDFNQAVETLKMFEKKDTRVKSAAATNLSFLYYLENDFAQASSYADLAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 478 NSDRYNPSALTNKGNTVFADGDYEKAAEFYREALRNDSSCTEALYNIGLTYKKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L+CF KL AI+ + +VL+QIAS+YE+ D QA++
Sbjct: 538 LDCFLKLHAILRNSAQVLHQIASIYELMEDPNQATE 573
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 131/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 236 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 295
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ PS+ I S + I GD E+ + D + NL
Sbjct: 296 HVMSVAPSLKAGFNLILSYFAI-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 354
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP+IE +F+ GY+WCV+ ++ S + LA
Sbjct: 355 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELA 414
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 415 NDLEINKAITYLRQKDFNQAVETLKMFEKKDTRVKSAAATNLSFLYYL 462
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 133 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTAPENINL 192
Query: 64 ELTFS---NINRKKNARAVRNDALSQ----LHREMKHEAEKCILTSAKLIAPSIEDNFSN 116
+LT+S N+ + +A + +AL+ + +M A + + + + N+S
Sbjct: 193 DLTYSVLFNLASQYSANDMYAEALNTYQVIVRNKMFSNAGRLKVNMGNIYLK--QRNYSK 250
Query: 117 G---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AATN 171
Y + I S H + + N VTF++ S A++ + + S A N
Sbjct: 251 AIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHVMSVAPSLKAGFN 309
Query: 172 LSFIYFLQGEVEQAEK 187
L YF G+ E+ +K
Sbjct: 310 LILSYFAIGDREKMKK 325
>gi|359322789|ref|XP_534539.4| PREDICTED: intraflagellar transport protein 88 homolog [Canis lupus
familiaris]
Length = 825
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDRLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL I+ + +VLYQIA++YE+ D QA
Sbjct: 539 LDCFLKLHTILRNSAQVLYQIANVYELMEDPHQA 572
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGD------------------------VEQASDVNENL 294
+ ++ P++ I S + + GD + + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAV-GDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDRLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KER+L++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERILVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLLNLASQYSANEMYAEALTTFQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ ++ +K
Sbjct: 309 FNLILSYFAVGDRDKMKK 326
>gi|338715235|ref|XP_001489102.3| PREDICTED: intraflagellar transport protein 88 homolog [Equus
caballus]
Length = 825
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA +YE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIAHVYELMEDPNQA 572
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ L N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ ++ P++ I S + + GD E+ D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAV-GDQEKMKKAFQKLIAVPLEIDEDDKYISPNDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESC+ D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCVANGCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGILKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKILQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 309 FNLILSYFAVGDQEKMKK 326
>gi|296481738|tpg|DAA23853.1| TPA: intraflagellar transport 88 homolog [Bos taurus]
Length = 825
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 193/342 (56%), Gaps = 24/342 (7%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND +C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND--ALSQLHREM 311
L+CF KL AI+ + +VLYQIA++YE+ D QA + L+ V D ALS+L
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQ-LISVVPTDSRALSKLGGLY 597
Query: 312 KHEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKW 657
Query: 362 ----AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLV 399
A F R + +A+D K ++ N+ + FLV
Sbjct: 658 QLMVASCFRRSGNYQKALDTYK---DIHRKFPENVECLRFLV 696
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAI-GDREKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTRPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A+ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFEHIMSMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 309 FNLILSYFAIGDREKMKK 326
>gi|291239488|ref|XP_002739657.1| PREDICTED: OSMotic avoidance abnormal family member (osm-5)-like
[Saccoglossus kowalevskii]
Length = 826
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 149/216 (68%), Gaps = 4/216 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q +++K + E+ ++ SAK+IAP+IE F+ GY+WCV +++S ++ LA DL
Sbjct: 353 AIKNDTLRQEEKKIKSDMERYVMASAKIIAPAIEQTFAAGYDWCVDCVKSSLYTDLANDL 412
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEM----TSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAV +L+ D +QA++ LK ++ S+A+TNLSF+YFLQ + + A+K AE A
Sbjct: 413 EINKAVMYLKQKDTTQAIETLKGFEKKDSKCASAASTNLSFLYFLQNDYQLADKYAEMAI 472
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD YN A VN GNC A+ DY K +E Y A D++C EALYNLGL +K +N D+
Sbjct: 473 QADRYNPYAMVNKGNCLFAQGDYEKAREYYQEAGRTDSSCTEALYNLGLTNKKINLLEDA 532
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L+CF KL AI+ + P+VLY +A+LYE+ D QAS+
Sbjct: 533 LDCFLKLHAILRNSPQVLYHLATLYEMLEDSAQASE 568
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 121/228 (53%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + +Y K + Y ALD I+ + N+G+ + +YSD++ F
Sbjct: 231 VNMGNIYFKQRNYPKAVKFYRMALDQVPNTHKDMRIKIMQNIGVVFVKMGQYSDAITSFE 290
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ P + + Y GD ++ D + N+
Sbjct: 291 HIMGEKPDF-RTSFNLILCYFAIGDRDKMKRSFQRLLQVDLHIDDEDKYLPHPDDQHANM 349
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+LEA++ND L Q +++K + E+ ++ SAK+IAP+IE F+ GY+WCV +++S ++ LA
Sbjct: 350 VLEAIKNDTLRQEEKKIKSDMERYVMASAKIIAPAIEQTFAAGYDWCVDCVKSSLYTDLA 409
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDEM----TSSAATNLSFIYFL 398
DLEINKAV +L+ D +QA++ LK ++ S+A+TNLSF+YFL
Sbjct: 410 NDLEINKAVMYLKQKDTTQAIETLKGFEKKDSKCASAASTNLSFLYFL 457
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+++ LI+ESC A + ALEKAK A KER+L++ +EQ D N+
Sbjct: 128 PEEKIKQLEKKVNELIEESCFAANRGELNLALEKAKEAGRKERILVRQREQMAANDQINL 187
Query: 64 ELTFS 68
+LT+S
Sbjct: 188 DLTYS 192
>gi|426236519|ref|XP_004012215.1| PREDICTED: intraflagellar transport protein 88 homolog [Ovis aries]
Length = 825
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND +C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANVYELMEDPSQA 572
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAI-GDREKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTRPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A+ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFEHIMSMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 309 FNLILSYFAIGDREKMKK 326
>gi|440911858|gb|ELR61486.1| Intraflagellar transport protein 88-like protein, partial [Bos
grunniens mutus]
Length = 827
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 361 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 420
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 421 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 480
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND +C EALYN+GL +K LN ++
Sbjct: 481 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEA 540
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 541 LDCFLKLHAILRNSAQVLYQIANVYELMEDPSQA 574
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 239 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFE 298
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ + D + NL
Sbjct: 299 HIMSMAPNLKAGFNLILSYFAI-GDREKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNL 357
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 358 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 417
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 418 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 465
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 136 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTRPENINL 195
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 196 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 251
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A+ + M + A
Sbjct: 252 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFEHIMSMAPNLKAG 310
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 311 FNLILSYFAIGDREKMKK 328
>gi|395848202|ref|XP_003796745.1| PREDICTED: intraflagellar transport protein 88 homolog [Otolemur
garnettii]
Length = 806
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ R+ K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 340 AIKNDHLRQMERDRKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 399
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 400 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 459
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 460 NSDRYNPSALTNKGNTVFANADYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 519
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 520 LDCFLKLHAILRNSAQVLYQIANVYELMEDPNQA 553
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 218 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIRTGQYSDAINSFE 277
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ + D + NL
Sbjct: 278 HIMSMAPNLKAGFNLILSYFAI-GDREKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNL 336
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ R+ K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 337 VIEAIKNDHLRQMERDRKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 396
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 397 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 444
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 115 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 174
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 175 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 230
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF+R S A++ + M + A
Sbjct: 231 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIRTGQYSDAINSFEHIMSMAPNLKAG 289
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 290 FNLILSYFAIGDREKMKK 307
>gi|160707933|ref|NP_001104256.1| intraflagellar transport protein 88 homolog [Bos taurus]
Length = 825
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND +C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANVYELMEDPSQA 572
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAI-GDREKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTRPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A+ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFEHIMSMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 309 FNLILSYFAIGDREKMKK 326
>gi|327269026|ref|XP_003219296.1| PREDICTED: intraflagellar transport protein 88 homolog [Anolis
carolinensis]
Length = 820
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 144/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND+L Q+ RE K AEK I+T+AKLIAP+IE +F+ GY+WCV ++ S + LA DL
Sbjct: 359 AIKNDSLRQMERERKATAEKYIMTAAKLIAPAIETSFAVGYDWCVDVVKTSQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+YFL+ EV QA ++ A
Sbjct: 419 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYFLENEVTQASTYSDLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
D YN AA N GN DY K E Y AL ND++C EALYN+GL K LN ++
Sbjct: 479 NTDRYNPAALTNKGNTIFVNGDYEKAAEFYKEALRNDSSCTEALYNIGLTLKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+ F KL AI+ + +VL+QIAS+YE+ D QA
Sbjct: 539 LDSFLKLHAILRNSAQVLFQIASIYELMEDPNQA 572
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 131/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+ N + + +Y K + Y ALD A+ I+ + N+G+A +Y+D++ F
Sbjct: 237 VNMANIYLKQRNYSKAIKFYRMALDQIASVHKEMRIKIMQNIGIAFIKTGQYTDAISSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGD------------------------VEQASDVNENL 294
+ + P++ + + + Y TGD + Q D + NL
Sbjct: 297 HIMSTSPNL-KAGFNLILCYFATGDRDQMKKAFQKLIAVPLDIDDDDKYISQGDDAHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND+L Q+ RE K AEK I+T+AKLIAP+IE +F+ GY+WCV ++ S + LA
Sbjct: 356 LIEAIKNDSLRQMERERKATAEKYIMTAAKLIAPAIETSFAVGYDWCVDVVKTSQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+YFL
Sbjct: 416 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYFL 463
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 35/247 (14%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PE K +++E+++ L++ES I D K ALEKAK A KER L++ +EQ + N+
Sbjct: 134 PEGKIKQLEKKVNELVEESSIAHSCGDLKLALEKAKDAGRKERALVRQREQTMSPANINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT++ N+ + +A + +AL+ +K++ + + ++ ++ + N+
Sbjct: 194 DLTYTVLFNLASQYSANEMYAEALNTYQVIVKNK----MFVNGGMLKVNMANIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS---- 167
S Y + I S H + + N + F++ Q D + S + + S+
Sbjct: 250 SKAIKFYRMALDQI-ASVHKEMRIKIMQNIGIAFIK---TGQYTDAISSFEHIMSTSPNL 305
Query: 168 -AATNLSFIYFLQGEVEQAEKMAEE--ACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
A NL YF G+ +Q +K ++ A D + +++ G+ A L +
Sbjct: 306 KAGFNLILCYFATGDRDQMKKAFQKLIAVPLDIDDDDKYISQGDDAHT--------NLLI 357
Query: 225 HALDNDA 231
A+ ND+
Sbjct: 358 EAIKNDS 364
>gi|196005799|ref|XP_002112766.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
gi|190584807|gb|EDV24876.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
Length = 802
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 148/216 (68%), Gaps = 4/216 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A+RND L ++ RE K AE+CI+ +AKLIAP IE F+ G++WC+ +++S + LA DL
Sbjct: 344 AIRNDTLWKVERERKSTAERCIMYAAKLIAPVIEPTFAAGFDWCIGCVKSSPYVELANDL 403
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI KAVT+L+M D+++A + LKS ++ M ++AATNL+F+Y +GE+ AEK ++ A
Sbjct: 404 EITKAVTYLKMKDLAKATETLKSFEKKDSTMATAAATNLAFLYIQEGELSLAEKYSDLAI 463
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
T+D YN A VN GNC ++Y K +E Y AL+ +A+C+EALYNLGL K LN +S
Sbjct: 464 TSDRYNPNAMVNKGNCLFTAKEYEKAQEYYKEALNVEASCVEALYNLGLTKKMLNCPEES 523
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L+CF KL I+ + P +L QIA LYEI D QA D
Sbjct: 524 LDCFLKLHGIIRNDPMILVQIAELYEILDDFHQAID 559
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 121/226 (53%), Gaps = 32/226 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + + +Y ALD N I+ + N+G + L +Y D++ +
Sbjct: 222 VNMGNIYSKQGKHQQAIRMYRMALDQVPNANTTMRIKIMQNIGSSFVRLGQYEDAVTVYD 281
Query: 259 KLQAIVPSMPEVLYQIASLYEI-------------------TGDVEQ---ASDVNE-NLL 295
++ L I Y I GD E+ SD N+ N+
Sbjct: 282 QIMTEKGDFKTGLNLIVCYYSINDRDKMKKTFQRMLMIDLGVGDDEKFMSVSDDNDMNIY 341
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA+RND L ++ RE K AE+CI+ +AKLIAP IE F+ G++WC+ +++S + LA
Sbjct: 342 YEAIRNDTLWKVERERKSTAERCIMYAAKLIAPVIEPTFAAGFDWCIGCVKSSPYVELAN 401
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYF 397
DLEI KAVT+L+M D+++A + LKS ++ M ++AATNL+F+Y
Sbjct: 402 DLEITKAVTYLKMKDLAKATETLKSFEKKDSTMATAAATNLAFLYI 447
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +ME+++ LI+ES + + + ALEKAK A +ER++ K +EQ G +D N+
Sbjct: 119 PEEKIRQMEKKVNELIEESALAGERGELQLALEKAKEAGRRERMICKQREQAGLSDQINL 178
Query: 64 ELTFS 68
+LT+S
Sbjct: 179 DLTYS 183
>gi|340712835|ref|XP_003394959.1| PREDICTED: intraflagellar transport protein 88 homolog [Bombus
terrestris]
Length = 796
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 166/255 (65%), Gaps = 12/255 (4%)
Query: 48 LIKLQEQFGHADSHNI---ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAK 104
L+++Q D +NI + F+ +N ++ND LS+L +E+K EAEK IL +AK
Sbjct: 319 LLEVQLNIDQEDRYNISTDDAAFNILNE-----ILKNDDLSKLEKELKLEAEKTILCAAK 373
Query: 105 LIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD-- 162
LIAP IED + G+ WCV +I++S + LA DLEI+KA+ FL + A+D LK +
Sbjct: 374 LIAPVIEDTLTAGFAWCVDTIKSSTYGPLAADLEISKAMVFLHNRETQLAIDTLKMFENR 433
Query: 163 --EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
+ SSAAT LSFIYFLQG+ EQAE+ E A AD+YN+AA+VNL CA+ + + +
Sbjct: 434 ESKANSSAATMLSFIYFLQGDYEQAERCGEIARNADSYNAAAYVNLSACAIRKGELNIAR 493
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
EL + +LD DA+ ++ALYNLGL +K N Y ++LECF K++ IV P+ +YQI LY++
Sbjct: 494 ELLLCSLDTDASHVQALYNLGLVYKKQNMYEEALECFWKVRNIVRHDPQTVYQIGQLYQL 553
Query: 281 TGDVEQASDVNENLL 295
D++QAS+ LL
Sbjct: 554 MNDIDQASEWYNQLL 568
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 199/410 (48%), Gaps = 95/410 (23%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E++I+ LI+ S + + K ALE+A+ AS++ER LI+LQEQ G +D+HN+
Sbjct: 122 PEEKIKVAERKIMELIESSVQASYENNTKIALERAREASSRERALIRLQEQAGLSDNHNV 181
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A + M EA IA Q
Sbjct: 182 DLTFA---------VIFNLATQYTNNNMFTEA----------IA-------------TYQ 209
Query: 124 SI-RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSF 174
+I RN S+ A+ L++N +++M +SQA+ + + + +A N+
Sbjct: 210 AITRNRMFSNSAR-LKVNMGNIYVKMGQLSQAIKMYRMAFDQAPAAHKDLRIKIMHNIGM 268
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
++ G +E+A NS +V R ++ G +HA+
Sbjct: 269 LFVQMGRLEEAA------------NSFEWV-----MKERAEFKAG----LHAV------- 300
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI--ASLYEITGDVEQASDVNE 292
L + L+H+ K++ + EV I Y I+ D D
Sbjct: 301 --LCHFALSHRD------------KMKRSFLELLEVQLNIDQEDRYNISTD-----DAAF 341
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSS 352
N+L E ++ND LS+L +E+K EAEK IL +AKLIAP IED + G+ WCV +I++S +
Sbjct: 342 NILNEILKNDDLSKLEKELKLEAEKTILCAAKLIAPVIEDTLTAGFAWCVDTIKSSTYGP 401
Query: 353 LAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
LA DLEI+KA+ FL + A+D LK + + SSAAT LSFIYFL
Sbjct: 402 LAADLEISKAMVFLHNRETQLAIDTLKMFENRESKANSSAATMLSFIYFL 451
>gi|118085018|ref|XP_417145.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Gallus gallus]
Length = 821
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND+L Q+ RE K AE I+T+AKLIAP IE +F+ GY+WCV++++ S + LA DL
Sbjct: 359 AIKNDSLRQIERERKSMAEDYIMTAAKLIAPVIETSFAVGYDWCVEAVKASHYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA T+LR D +QA++ LK ++ + S+AATNLSF+Y+L+ E+ QA A+ A
Sbjct: 419 EINKATTYLRQRDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQATNYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
++D YN AA N GN A DY K E Y AL ND +C EALYNLGL +K LN ++
Sbjct: 479 SSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRIDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VL+QIA +YEI D QA
Sbjct: 539 LDCFLKLHAILGNSAQVLHQIADIYEIMEDPNQA 572
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+A +Y D++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYMDAISSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ + P++ + + + Y GD EQ D + NL
Sbjct: 297 HIMSTSPNL-KAGFNLIVCYFAIGDSEQMKKAFQKLIAVPLEVDFDDKYVSPNDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND+L Q+ RE K AE I+T+AKLIAP IE +F+ GY+WCV++++ S + LA
Sbjct: 356 LIEAIKNDSLRQIERERKSMAEDYIMTAAKLIAPVIETSFAVGYDWCVEAVKASHYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA T+LR D +QA++ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKATTYLRQRDFNQALETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ +DS N++
Sbjct: 135 EEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERVLVRQREQTATSDSINLD 194
Query: 65 LTFS---NINRKKNARAVRNDALSQ----LHREMKHEAEKCILTSAKLIAPSIEDNFSNG 117
LT+S N+ + A + +AL+ + +M + + + + + N+S
Sbjct: 195 LTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFNNGGRLKVNMGNIYLK--QRNYSKA 252
Query: 118 ---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS-----AA 169
Y + I S H + + N V F++ Q +D + S + + S+ A
Sbjct: 253 IKFYRMALDQI-PSVHKEMRIKIMQNIGVAFIK---TGQYMDAISSFEHIMSTSPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ EQ +K
Sbjct: 309 FNLIVCYFAIGDSEQMKK 326
>gi|242017488|ref|XP_002429220.1| tetratricopeptide repeat protein 10, tpr10, putative [Pediculus
humanus corporis]
gi|212514109|gb|EEB16482.1| tetratricopeptide repeat protein 10, tpr10, putative [Pediculus
humanus corporis]
Length = 845
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 166/245 (67%), Gaps = 7/245 (2%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
++ND L Q ++++ EAEK IL +AKLI+P IEDN+++GYNWC+++++ S ++SLA DL+
Sbjct: 367 IKNDKLRQWEKDVQEEAEKSILIAAKLISPVIEDNYTSGYNWCLEAVKTSKYASLASDLD 426
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
++KA+ L+ +++ A+++LK + + S AA NLSFI +LQG++EQAEK E A
Sbjct: 427 LDKAIMLLKQCNINGAIEILKVFQDKEPRVASIAANNLSFISYLQGDLEQAEKWGENAKE 486
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D+YN++A+VNLGN A + ++ + KE Y A +ND+TC+EALYNLGL K L +Y SL
Sbjct: 487 SDSYNASAYVNLGNVAFTKRNFEQAKEYYEIAYENDSTCVEALYNLGLVTKQLGQYDISL 546
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA--LSQLHREMK 312
F KL I+ VLYQ+A L E GDV+QA++ LL V +D L +L + +
Sbjct: 547 GHFMKLDTILRHEAPVLYQLAILNEFIGDVDQATEWYLQ-LLGVVPSDPGILQELGQLFE 605
Query: 313 HEAEK 317
E +K
Sbjct: 606 REGDK 610
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 204/407 (50%), Gaps = 85/407 (20%)
Query: 2 ERPEEKFERMEQEIIGLIDES-CICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADS 60
E PE+K +++E++I+ LI+ES C+ + Q K AL KAK AS+KER LI+++E G +++
Sbjct: 139 ETPEDKIKKLEKQIMELIEESACLNVKGQK-KQALSKAKEASSKERNLIRIEENSGMSET 197
Query: 61 HNIELTFSNINRKKNARAVRNDALSQLHREMKHEAEKC--ILTSAKLI--APSIEDNFSN 116
HN++LT + N A EM EA ++T K+ A ++ N N
Sbjct: 198 HNLDLTL---------LVLFNLATQYSDNEMYTEALNTYQVMTRNKVFSKARRLKVNMGN 248
Query: 117 GYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVD-VLKSCDEMTSSAATNLSFI 175
Y + +Q + NKAV RM A+D V + + N+ +
Sbjct: 249 IY-YKLQ--------------QYNKAVKMYRM-----AMDQVPNTQKDFRIKIMHNIGTL 288
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
+ GE+ +A + E + + +NL NC A D K KE + +
Sbjct: 289 FLKTGEIIEAIN-SFEYIMQEKPDFRGALNLINCYHAINDPDKMKEAF-----------Q 336
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
++ N+ L +++Y+ S+ A D +L
Sbjct: 337 SMLNIPL-DLDMDKYNQSI--------------------------------ADDPQSQVL 363
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
LE ++ND L Q ++++ EAEK IL +AKLI+P IEDN+++GYNWC+++++ S ++SLA
Sbjct: 364 LETIKNDKLRQWEKDVQEEAEKSILIAAKLISPVIEDNYTSGYNWCLEAVKTSKYASLAS 423
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DL+++KA+ L+ +++ A+++LK + + S AA NLSFI +L
Sbjct: 424 DLDLDKAIMLLKQCNINGAIEILKVFQDKEPRVASIAANNLSFISYL 470
>gi|443694227|gb|ELT95420.1| hypothetical protein CAPTEDRAFT_226263 [Capitella teleta]
Length = 837
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 149/213 (69%), Gaps = 4/213 (1%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
++ND+L Q+ RE K EAE CIL ++K+I+P++E++FS GY+WC+ +++S + LA LE
Sbjct: 354 IKNDSLRQIEREKKSEAEHCILMASKIISPAVENSFSAGYDWCIDQVKSSQYMELAHTLE 413
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
I+KA+ FL+ D QAV+ LKS ++ + ++AATNLSF+Y L+ E+ AEK AE A
Sbjct: 414 IDKAIGFLKQKDFQQAVETLKSFEKKDTKVAATAATNLSFLYILETELSNAEKYAEVALQ 473
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D YN +A VN GN R +Y K +E Y AL ND++C+EALYNLGL++K L Y D+L
Sbjct: 474 SDRYNPSALVNKGNVLYQRREYEKAREFYRDALQNDSSCVEALYNLGLSNKKLKRYEDAL 533
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E F KL +I+ + +V+YQ+A ++++ D QA
Sbjct: 534 ESFFKLHSILRNSAQVIYQLADIHDLINDRTQA 566
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 32/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + ++ K + Y ALD I+ + N+G+ + +YSD++ F
Sbjct: 231 VNMGNIYFKQRNFSKAIKYYRMALDQIPNTHKNMRIKIMQNIGITFVKMGQYSDAITSFE 290
Query: 259 KL-----------------------QAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ + + + +VL + + D L+
Sbjct: 291 HIMMEDGCFRSGFNLILCYFALGDREKMKRTFQKVLTVDLKVDDDDKYTSSTDDKQYTLI 350
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
LE ++ND+L Q+ RE K EAE CIL ++K+I+P++E++FS GY+WC+ +++S + LA
Sbjct: 351 LEMIKNDSLRQIEREKKSEAEHCILMASKIISPAVENSFSAGYDWCIDQVKSSQYMELAH 410
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
LEI+KA+ FL+ D QAV+ LKS + ++ ++AATNLSF+Y L
Sbjct: 411 TLEIDKAIGFLKQKDFQQAVETLKSFEKKDTKVAATAATNLSFLYIL 457
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 108/205 (52%), Gaps = 19/205 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+++ LI+ESC + +F+ ALEKAK A KER+L++ +EQ +D N+
Sbjct: 128 PEEKIKQLEKKVNELIEESCFASSRGEFQVALEKAKEAGRKERMLVRQREQLAASDQINL 187
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + A + ++AL+ +K++ + ++A + ++ + NF
Sbjct: 188 DLTYSVLFNLASQYAANEMYSEALNTYQVIVKNK----MFSNAGRLKVNMGNIYFKQRNF 243
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC--DEMTSSAA 169
S Y + I N+ H ++ + N +TF++M S A+ + ++ +
Sbjct: 244 SKAIKYYRMALDQIPNT-HKNMRIKIMQNIGITFVKMGQYSDAITSFEHIMMEDGCFRSG 302
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACT 194
NL YF G+ E+ ++ ++ T
Sbjct: 303 FNLILCYFALGDREKMKRTFQKVLT 327
>gi|344284581|ref|XP_003414044.1| PREDICTED: intraflagellar transport protein 88 homolog [Loxodonta
africana]
Length = 825
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ E K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMEHERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAVTYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VLYQIA++YE+ D QA
Sbjct: 539 LDCFLKLHAILRNSAQVLYQIANVYELMEDPNQA 572
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + + GD E+ + D + NL
Sbjct: 297 HIMSMAPNLKAGFNLILSYFAV-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ E K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 VIEAIKNDHLRQMEHERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAVTYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTAPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGILKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 309 FNLILSYFAVGDREKMKK 326
>gi|363729328|ref|XP_003640630.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Gallus gallus]
Length = 817
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND+L Q+ RE K AE I+T+AKLIAP IE +F+ GY+WCV++++ S + LA DL
Sbjct: 359 AIKNDSLRQIERERKSMAEDYIMTAAKLIAPVIETSFAVGYDWCVEAVKASHYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA T+LR D +QA++ LK ++ + S+AATNLSF+Y+L+ E+ QA A+ A
Sbjct: 419 EINKATTYLRQRDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQATNYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
++D YN AA N GN A DY K E Y AL ND +C EALYNLGL +K LN ++
Sbjct: 479 SSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRIDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + +VL+QIA +YEI D QA
Sbjct: 539 LDCFLKLHAILGNSAQVLHQIADIYEIMEDPNQA 572
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+A +Y D++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYMDAISSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ + P++ + + + Y GD EQ D + NL
Sbjct: 297 HIMSTSPNL-KAGFNLIVCYFAIGDSEQMKKAFQKLIAVPLEVDFDDKYVSPNDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND+L Q+ RE K AE I+T+AKLIAP IE +F+ GY+WCV++++ S + LA
Sbjct: 356 LIEAIKNDSLRQIERERKSMAEDYIMTAAKLIAPVIETSFAVGYDWCVEAVKASHYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA T+LR D +QA++ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKATTYLRQRDFNQALETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ +DS N++
Sbjct: 135 EEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERVLVRQREQTATSDSINLD 194
Query: 65 LTFS---NINRKKNARAVRNDALSQ----LHREMKHEAEKCILTSAKLIAPSIEDNFSNG 117
LT+S N+ + A + +AL+ + +M + + + + + N+S
Sbjct: 195 LTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFNNGGRLKVNMGNIYLK--QRNYSKA 252
Query: 118 ---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS-----AA 169
Y + I S H + + N V F++ Q +D + S + + S+ A
Sbjct: 253 IKFYRMALDQI-PSVHKEMRIKIMQNIGVAFIK---TGQYMDAISSFEHIMSTSPNLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ EQ +K
Sbjct: 309 FNLIVCYFAIGDSEQMKK 326
>gi|224043184|ref|XP_002188826.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Taeniopygia guttata]
Length = 823
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 148/214 (69%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND+LSQ+ + K AE+ I+T+AKLIAP+IE +F+ GY+WCV +++ S + LA DL
Sbjct: 359 AIKNDSLSQIEHDRKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA T+LR + +QA++ LK ++ + S+AATNLSF+Y+L E+EQA A+ A
Sbjct: 419 EINKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQATNYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A D K E Y AL ND+ C EALYNLGLA+K LN ++
Sbjct: 479 NSDRYNPAALTNKGNTIFANGDCEKAAEFYKEALRNDSLCTEALYNLGLAYKKLNRIDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+P+ +VLYQ+AS+Y+I D QA
Sbjct: 539 LDCFLKLHAILPNSAQVLYQLASIYQIMEDPNQA 572
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 132/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+A +Y D++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIKTGQYIDAISSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
++ +I P++ + + + Y G+ EQ D++ NL
Sbjct: 297 EIMSISPNL-KAGFNLILCYFAIGNGEQMKKAFKNLIEVPLEVDYEDKYISLNDDLHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND+LSQ+ + K AE+ I+T+AKLIAP+IE +F+ GY+WCV +++ S + LA
Sbjct: 356 LIEAIKNDSLSQIEHDRKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA T+LR + +QA++ LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 45/210 (21%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK ++E+++ L++ESC+ D K ALEKAK A +ER L++ +EQ +S N++
Sbjct: 135 EEKMRQLEKKVNELVEESCVANSCGDLKLALEKAKEAGRQERELLRQREQIAPPESINLD 194
Query: 65 LTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNG------- 117
LT++ + N A + EM EA LT+ ++I + FSNG
Sbjct: 195 LTYT---------VLLNLASQYVANEMYAEA----LTTYQVIVKN--KMFSNGGILKVNM 239
Query: 118 ---------YNWCVQSIR------NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD 162
Y+ ++ R S+H + + N V F++ Q +D + S +
Sbjct: 240 GNIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIK---TGQYIDAISSFE 296
Query: 163 EMTS-----SAATNLSFIYFLQGEVEQAEK 187
E+ S A NL YF G EQ +K
Sbjct: 297 EIMSISPNLKAGFNLILCYFAIGNGEQMKK 326
>gi|340381680|ref|XP_003389349.1| PREDICTED: intraflagellar transport protein 88 homolog [Amphimedon
queenslandica]
Length = 803
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 147/222 (66%), Gaps = 4/222 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A+ +D+L +L +E K +AE+ IL +AKLIAP IE + + G++WC++ ++NS HS LA +L
Sbjct: 361 AISDDSLRRLEKETKRKAERTILNAAKLIAPVIEGSLATGFDWCIEVVKNSVHSELASEL 420
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI KA+TFLR D+ +A++ LK C +M SA+TNLSF+++L +V Q+EK A+ A
Sbjct: 421 EITKALTFLREKDLPRAIETLKDCGRRDTKMAVSASTNLSFVFYLSNDVSQSEKYADLAI 480
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
D YN A VN GNC A+ Y E Y AL +ATC EALYNLGLA+K L + +
Sbjct: 481 QMDRYNPLALVNKGNCLYAQGQYQSSVEYYQEALSVEATCSEALYNLGLAYKKLKNFPSA 540
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L CF KL I S+P+VLYQIA +YE + ++A D + L+
Sbjct: 541 LSCFTKLHTIFKSLPQVLYQIADIYEKMEEYDKAIDCFKQLI 582
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Query: 288 SDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN 347
SD + +L+EA+ +D+L +L +E K +AE+ IL +AKLIAP IE + + G++WC++ ++N
Sbjct: 351 SDYQQRMLIEAISDDSLRRLEKETKRKAERTILNAAKLIAPVIEGSLATGFDWCIEVVKN 410
Query: 348 SAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
S HS LA +LEI KA+TFLR D+ +A++ LK C +M SA+TNLSF+++L
Sbjct: 411 SVHSELASELEITKALTFLREKDLPRAIETLKDCGRRDTKMAVSASTNLSFVFYL 465
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSH 61
+ PE +E+++ L++ES ++ ALE AK AS KER+L K +EQ +
Sbjct: 129 DNPEIAINNLEKKVNSLLEESADANVKGNYTLALELAKEASRKERMLCKQREQKLLTEQI 188
Query: 62 NIELTFS 68
N++LT+S
Sbjct: 189 NLDLTYS 195
>gi|109120148|ref|XP_001086373.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Macaca mulatta]
gi|109120152|ref|XP_001086485.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Macaca mulatta]
Length = 824
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 159/248 (64%), Gaps = 11/248 (4%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--LEAVRNDA--LSQLHR 309
L+CF KL AI+ + EVLYQIA++YE+ +E S E L+ + V D LS+L
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYEL---MENPSQAIEWLMQVVSVVPTDPQVLSKLGE 594
Query: 310 EMKHEAEK 317
HE +K
Sbjct: 595 LYDHEGDK 602
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 462
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI + D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEK 187
NL+ YF G+ E+ +K
Sbjct: 310 NLTICYFAVGDREKMKK 326
>gi|353231945|emb|CCD79300.1| putative tetratricopeptide repeat protein 10, tpr10 [Schistosoma
mansoni]
Length = 682
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 173/296 (58%), Gaps = 33/296 (11%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EE+ + ME+ + L++ESC+ A + ALEKAK AS KERVL + +EQ G AD N++
Sbjct: 139 EERIKNMEKRVNHLVEESCVAACQGEITLALEKAKEASRKERVLARQREQLGVADQINLD 198
Query: 65 LTFS---NINRKKNARAVRNDALSQ----LHREMKHEAEKCILTSAKLIAPSIEDNFSNG 117
LT+S N+ + A + +AL+ + +MK +AE I +AK+IAP IE NFS G
Sbjct: 199 LTYSVLFNLANRYTANGMYQEALNTYQTIVRNKMKVQAENFIKMAAKIIAPVIESNFSTG 258
Query: 118 YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLS 173
Y+WC+ ++ S++ +A DLEI+KAV FL+ D QA+D LKS + + SAATNLS
Sbjct: 259 YDWCIDHVKMSSYHEIAHDLEIDKAVMFLKQRDFHQAIDTLKSFERKDTRVACSAATNLS 318
Query: 174 FIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATC 233
F+YFL+ A VN GN ++ Y + ++ Y AL +D C
Sbjct: 319 FLYFLE----------------------ALVNKGNVLYQQQQYERARDCYAEALQDDTRC 356
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+EALYNLGL K L Y ++LE F KL +++ + V+YQ+ +YE GD QA +
Sbjct: 357 VEALYNLGLVCKQLERYEEALEAFFKLYSVLRNSAPVVYQLMDIYEKLGDSTQAQE 412
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 16/133 (12%)
Query: 270 VLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPS 329
VL+ +A+ Y G ++A + + + VRN +MK +AE I +AK+IAP
Sbjct: 203 VLFNLANRYTANGMYQEALNTYQTI----VRN--------KMKVQAENFIKMAAKIIAPV 250
Query: 330 IEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS--- 386
IE NFS GY+WC+ ++ S++ +A DLEI+KAV FL+ D QA+D LKS + +
Sbjct: 251 IESNFSTGYDWCIDHVKMSSYHEIAHDLEIDKAVMFLKQRDFHQAIDTLKSFERKDTRVA 310
Query: 387 -SAATNLSFIYFL 398
SAATNLSF+YFL
Sbjct: 311 CSAATNLSFLYFL 323
>gi|157821925|ref|NP_001100736.1| intraflagellar transport protein 88 homolog [Rattus norvegicus]
gi|149064079|gb|EDM14349.1| intraflagellar transport 88 homolog (Chlamydomonas) (predicted)
[Rattus norvegicus]
Length = 815
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 193/341 (56%), Gaps = 22/341 (6%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
++D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 SSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMK 312
L+ F KL AI+ + +VL QIA++YE+ D QA + L+ + + ALS+L
Sbjct: 539 LDSFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYD 598
Query: 313 HEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK- 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 599 SEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ 658
Query: 362 ---AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLV 399
A F R + +A+D K E+ N+ + FLV
Sbjct: 659 LMVASCFRRSGNYQKALDTYK---EIHRKFPENVECLRFLV 696
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ PS+ I S + I GD E+ + D + NL
Sbjct: 297 HIMSMAPSLKAGFNLILSCFAI-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA
Sbjct: 356 LIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTSPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N +TF++ S A++ + M S A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMSMAPSLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL F G+ E+ +K
Sbjct: 309 FNLILSCFAIGDREKMKK 326
>gi|355754559|gb|EHH58460.1| hypothetical protein EGM_08320 [Macaca fascicularis]
Length = 830
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 159/248 (64%), Gaps = 11/248 (4%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--LEAVRNDA--LSQLHR 309
L+CF KL AI+ + EVLYQIA++YE+ +E S E L+ + V D LS+L
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYEL---MENPSQAIEWLMQVVSVVPTDPQVLSKLGE 594
Query: 310 EMKHEAEK 317
HE +K
Sbjct: 595 LYDHEGDK 602
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 462
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI + D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEK 187
NL+ YF G+ E+ +K
Sbjct: 310 NLTICYFAVGDREKMKK 326
>gi|15126637|gb|AAH12250.1| Intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 824
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 192/341 (56%), Gaps = 22/341 (6%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 418 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 478 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMK 312
L+ F KL AI+ + +VL QIA++YE+ D QA + L+ + + ALS+L
Sbjct: 538 LDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYD 597
Query: 313 HEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK- 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 598 SEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ 657
Query: 362 ---AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLV 399
A F R + +A+D K E+ N+ + FLV
Sbjct: 658 LMVASCFRRSGNYQKALDTYK---EIHRKFPENVECLRFLV 695
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 236 VNMGNIHLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFE 295
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ PS+ I S + I GD E+ + D + NL
Sbjct: 296 HIMSMAPSLKAGFNLILSCFAI-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 354
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA
Sbjct: 355 LIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELA 414
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 415 NDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 462
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 133 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTSPENINL 192
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 193 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIHLKQRNY 248
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N +TF++ S A++ + M S A
Sbjct: 249 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMSMAPSLKAG 307
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL F G+ E+ +K
Sbjct: 308 FNLILSCFAIGDREKMKK 325
>gi|499647|gb|AAB59705.1| unknown [Mus musculus]
Length = 824
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 192/341 (56%), Gaps = 22/341 (6%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 418 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 478 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMK 312
L+ F KL AI+ + +VL QIA++YE+ D QA + L+ + + ALS+L
Sbjct: 538 LDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYD 597
Query: 313 HEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK- 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 598 SEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ 657
Query: 362 ---AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLV 399
A F R + +A+D K E+ N+ + FLV
Sbjct: 658 LMVASCFRRSGNYQKALDTYK---EIHRKFPENVECLRFLV 695
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 236 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFE 295
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ PS+ I S + I GD E+ + D + NL
Sbjct: 296 HIMSMAPSLKAGFNLILSCFAI-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 354
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA
Sbjct: 355 LIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELA 414
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 415 NDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 462
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 133 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTSPENINL 192
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 193 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 248
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N +TF++ S A++ + M S A
Sbjct: 249 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMSMAPSLKAG 307
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL F G+ E+ +K
Sbjct: 308 FNLILSCFAIGDREKMKK 325
>gi|355700850|gb|EHH28871.1| hypothetical protein EGK_09151 [Macaca mulatta]
Length = 830
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 159/248 (64%), Gaps = 11/248 (4%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--LEAVRNDA--LSQLHR 309
L+CF KL AI+ + EVLYQIA++YE+ +E S E L+ + V D LS+L
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYEL---MENPSQAIEWLMQVVSVVPTDPQVLSKLGE 594
Query: 310 EMKHEAEK 317
HE +K
Sbjct: 595 LYDHEGDK 602
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 462
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI + D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEK 187
NL+ YF G+ E+ +K
Sbjct: 310 NLTICYFAVGDREKMKK 326
>gi|402901513|ref|XP_003913693.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Papio anubis]
Length = 824
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 159/248 (64%), Gaps = 11/248 (4%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--LEAVRNDA--LSQLHR 309
L+CF KL AI+ + EVLYQIA++YE+ +E S E L+ + V D LS+L
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYEL---MENPSQAIEWLMQVVSVVPTDPQVLSKLGE 594
Query: 310 EMKHEAEK 317
HE +K
Sbjct: 595 LYDHEGDK 602
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 462
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI + D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEK 187
NL+ YF G+ E+ +K
Sbjct: 310 NLTICYFAVGDREKMKK 326
>gi|354476527|ref|XP_003500476.1| PREDICTED: intraflagellar transport protein 88 homolog [Cricetulus
griseus]
Length = 825
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 192/341 (56%), Gaps = 22/341 (6%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIESSFAVGYNWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMK 312
L+ F KL AI+ + +VL QIA++YE+ D QA + L+ + + ALS+L
Sbjct: 539 LDSFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYD 598
Query: 313 HEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK- 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 599 SEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ 658
Query: 362 ---AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLV 399
A F R + +A+D K E+ N+ + FLV
Sbjct: 659 LMVASCFRRSGNYQKALDTYK---EIHRKFPENVECLRFLV 696
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 200/406 (49%), Gaps = 87/406 (21%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNW 120
+LT+S N+ + +A + +AL+ ++ K+ FSN
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQ----------VIVKNKM--------FSNAGRL 235
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC-DEMTSSAATNLSFIYFLQ 179
V N + L Q +KA+ F RM A+D + S EM N+ +
Sbjct: 236 KV----NMGNIYLKQ-RNYSKAIKFYRM-----ALDQIPSVHKEMRIKIMQNIGITFIKT 285
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+ +D NS + H + A ++A +N
Sbjct: 286 GQY------------SDAINS----------------------FEHIMSM-APNLKAGFN 310
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD---VEQASDVNENLLL 296
L L+ + + + F KL IA EI D + + D + NLL+
Sbjct: 311 LILSCFAIGDREKMKKAFQKL-------------IAVPLEIDEDDKYISPSDDPHTNLLV 357
Query: 297 EAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 356
EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA D
Sbjct: 358 EAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIESSFAVGYNWCVEVVKASQYVELAND 417
Query: 357 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
LEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 418 LEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 463
>gi|341940821|sp|Q61371.2|IFT88_MOUSE RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
Full=Recessive polycystic kidney disease protein Tg737;
AltName: Full=Tetratricopeptide repeat protein 10;
Short=TPR repeat protein 10; AltName:
Full=TgN(Imorpk)737Rpw
Length = 824
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 192/341 (56%), Gaps = 22/341 (6%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 418 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 478 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMK 312
L+ F KL AI+ + +VL QIA++YE+ D QA + L+ + + ALS+L
Sbjct: 538 LDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYD 597
Query: 313 HEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK- 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 598 SEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ 657
Query: 362 ---AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLV 399
A F R + +A+D K E+ N+ + FLV
Sbjct: 658 LMVASCFRRSGNYQKALDTYK---EIHRKFPENVECLRFLV 695
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 236 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFE 295
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ PS+ I S + I GD E+ + D + NL
Sbjct: 296 HIMSMAPSLKAGFNLILSCFAI-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 354
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA
Sbjct: 355 LIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELA 414
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 415 NDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 462
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 133 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTSPENINL 192
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 193 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 248
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N +TF++ S A++ + M S A
Sbjct: 249 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMSMAPSLKAG 307
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL F G+ E+ +K
Sbjct: 308 FNLILSCFAIGDREKMKK 325
>gi|239915965|ref|NP_033402.2| intraflagellar transport protein 88 homolog [Mus musculus]
gi|148704224|gb|EDL36171.1| intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 825
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 192/341 (56%), Gaps = 22/341 (6%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMK 312
L+ F KL AI+ + +VL QIA++YE+ D QA + L+ + + ALS+L
Sbjct: 539 LDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYD 598
Query: 313 HEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK- 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 599 SEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ 658
Query: 362 ---AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLV 399
A F R + +A+D K E+ N+ + FLV
Sbjct: 659 LMVASCFRRSGNYQKALDTYK---EIHRKFPENVECLRFLV 696
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ PS+ I S + I GD E+ + D + NL
Sbjct: 297 HIMSMAPSLKAGFNLILSCFAI-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA
Sbjct: 356 LIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 463
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTSPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N +TF++ S A++ + M S A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMSMAPSLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL F G+ E+ +K
Sbjct: 309 FNLILSCFAIGDREKMKK 326
>gi|397526289|ref|XP_003833065.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Pan paniscus]
Length = 833
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN+ ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNQLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 471
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KER L++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERFLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSLNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 319 NLTICYFAVGDREKMKKAFQKLIT 342
>gi|74149301|dbj|BAE22424.1| unnamed protein product [Mus musculus]
Length = 825
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 192/341 (56%), Gaps = 22/341 (6%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 419 EINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFMYYLENEFAQASSYADLAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN +A N GN A DY K E Y AL ND++C EALYN+GL +K LN ++
Sbjct: 479 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMK 312
L+ F KL AI+ + +VL QIA++YE+ D QA + L+ + + ALS+L
Sbjct: 539 LDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYD 598
Query: 313 HEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQSIRNSAHSSLAQDLEINK- 361
E +K S + +IE + +C ++I+ +SL Q ++
Sbjct: 599 SEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ 658
Query: 362 ---AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLV 399
A F R + +A+D K E+ N+ + FLV
Sbjct: 659 LMVASCFRRSGNYQKALDTYK---EIHRKFPENVECLRFLV 696
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ PS+ I S + I GD E+ + D + NL
Sbjct: 297 HIMSMAPSLKAGFNLILSCFAI-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 355
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA
Sbjct: 356 LIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELA 415
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 416 NDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFMYYL 463
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTSPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N +TF++ S A++ + M S A
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMSMAPSLKAG 308
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL F G+ E+ +K
Sbjct: 309 FNLILSCFAIGDREKMKK 326
>gi|402901515|ref|XP_003913694.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Papio anubis]
Length = 805
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 159/248 (64%), Gaps = 11/248 (4%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 339 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 398
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 399 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 458
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 459 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 518
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--LEAVRNDA--LSQLHR 309
L+CF KL AI+ + EVLYQIA++YE+ +E S E L+ + V D LS+L
Sbjct: 519 LDCFLKLHAILRNSAEVLYQIANIYEL---MENPSQAIEWLMQVVSVVPTDPQVLSKLGE 575
Query: 310 EMKHEAEK 317
HE +K
Sbjct: 576 LYDHEGDK 583
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 218 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 277
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 278 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLV 336
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 337 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 396
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 397 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 443
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI + D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 115 PEEKIKQLEKEVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 174
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 175 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 230
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 231 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 290
Query: 171 NLSFIYFLQGEVEQAEK 187
NL+ YF G+ E+ +K
Sbjct: 291 NLTICYFAVGDREKMKK 307
>gi|297274066|ref|XP_002800721.1| PREDICTED: intraflagellar transport protein 88 homolog [Macaca
mulatta]
Length = 805
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 159/248 (64%), Gaps = 11/248 (4%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 339 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 398
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 399 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 458
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 459 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 518
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--LEAVRNDA--LSQLHR 309
L+CF KL AI+ + EVLYQIA++YE+ +E S E L+ + V D LS+L
Sbjct: 519 LDCFLKLHAILRNSAEVLYQIANIYEL---MENPSQAIEWLMQVVSVVPTDPQVLSKLGE 575
Query: 310 EMKHEAEK 317
HE +K
Sbjct: 576 LYDHEGDK 583
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 218 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 277
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 278 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLV 336
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 337 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 396
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 397 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 443
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI + D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 115 PEEKIKQLEKEVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 174
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 175 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 230
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 231 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 290
Query: 171 NLSFIYFLQGEVEQAEK 187
NL+ YF G+ E+ +K
Sbjct: 291 NLTICYFAVGDREKMKK 307
>gi|449269718|gb|EMC80469.1| Intraflagellar transport protein 88 like protein, partial [Columba
livia]
Length = 819
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 149/216 (68%), Gaps = 4/216 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND+L Q+ E K AE+ I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 360 AIKNDSLRQIELERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEVVKASHYVELANDL 419
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA T+LR D +QA++ LK ++ + S+AATNLSF+Y+L+ E+ QA A+ A
Sbjct: 420 EINKATTYLRQQDFNQALETLKMFEKKDSRLKSAAATNLSFLYYLENELAQASNYADLAV 479
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYNLGL +K LN +++
Sbjct: 480 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRINEA 539
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L+CF KL AI+ + +VL+QIA++YEI D QA++
Sbjct: 540 LDCFLKLHAILRNSAQVLHQIANIYEIMEDPNQATE 575
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 196/403 (48%), Gaps = 83/403 (20%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ + N++
Sbjct: 136 EEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERVLVRQREQIATPEDINLD 195
Query: 65 LTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQS 124
LT+S + N A EM EA L + ++I + FSNG V
Sbjct: 196 LTYS---------VLFNLASQYAANEMYAEA----LNTYQVIVKN--KMFSNGGRLKV-- 238
Query: 125 IRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC-DEMTSSAATNLSFIYFLQGEVE 183
N + L Q +KA+ F RM A+D + S EM N+
Sbjct: 239 --NMGNIYLKQR-NYSKAIKFYRM-----ALDQIPSVHKEMRIKIMENI----------- 279
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
AF+ G Y+ + H + ++A +NL L
Sbjct: 280 ----------------GVAFIKTGQ-------YIDAISSFEHIMSMSPN-LKAGFNLILC 315
Query: 244 HKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNE----NLLLEAV 299
+ + + F KL A VPS EV Y ++ NE NLL+EA+
Sbjct: 316 YYAIGNGEQMKKAFQKLIA-VPS--EVDYD-----------DKYISPNEYPHTNLLIEAI 361
Query: 300 RNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEI 359
+ND+L Q+ E K AE+ I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DLEI
Sbjct: 362 KNDSLRQIELERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEVVKASHYVELANDLEI 421
Query: 360 NKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
NKA T+LR D +QA++ LK ++ + S+AATNLSF+Y+L
Sbjct: 422 NKATTYLRQQDFNQALETLKMFEKKDSRLKSAAATNLSFLYYL 464
>gi|403307654|ref|XP_003944301.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Saimiri boliviensis boliviensis]
Length = 834
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 368 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 427
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 428 EINKAVTYLRQRDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 487
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 488 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 547
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ ++ QA
Sbjct: 548 LDCFLKLHAILRNSAEVLYQIANIYELMENLSQA 581
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 205/403 (50%), Gaps = 82/403 (20%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 144 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQAATPENINL 203
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNW 120
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + + N+
Sbjct: 204 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 259
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD-EMTSSAATNLSFIYFLQ 179
+KA+ F RM A+D + S + +M N+ + L
Sbjct: 260 -------------------SKAIKFYRM-----ALDQVPSVNKQMRIKIMQNIGVTFILA 295
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+ +D NS Y H + A ++A YN
Sbjct: 296 GQY------------SDAINS----------------------YEHIMSM-APNLKAGYN 320
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
L + + + + + F KL A+ + E Y + + D + NL+ EA+
Sbjct: 321 LTVCYFAVGDREKMKKAFQKLIAVPLEIDEDKY-----------ISPSDDPHTNLVTEAI 369
Query: 300 RNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEI 359
+ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DLEI
Sbjct: 370 KNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDLEI 429
Query: 360 NKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
NKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 430 NKAVTYLRQRDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 472
>gi|397526291|ref|XP_003833066.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Pan paniscus]
Length = 824
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN+ ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNQLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 571
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 462
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KER L++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERFLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSLNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 310 NLTICYFAVGDREKMKKAFQKLIT 333
>gi|67971760|dbj|BAE02222.1| unnamed protein product [Macaca fascicularis]
Length = 613
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 159/248 (64%), Gaps = 11/248 (4%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 147 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 206
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 207 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 266
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 267 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 326
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--LEAVRNDA--LSQLHR 309
L+CF KL AI+ + EVLYQIA++YE+ +E S E L+ + V D LS+L
Sbjct: 327 LDCFLKLHAILRNSAEVLYQIANIYEL---MENPSQAIEWLMQVVSVVPTDPQVLSKLGE 383
Query: 310 EMKHEAEK 317
HE +K
Sbjct: 384 LYDHEGDK 391
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 26 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 85
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 86 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLV 144
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 145 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 204
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 205 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 251
>gi|397526293|ref|XP_003833067.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Pan paniscus]
Length = 805
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 339 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 398
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 399 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 458
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN+ ++
Sbjct: 459 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNQLDEA 518
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 519 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 552
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 218 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 277
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 278 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 336
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 337 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 396
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 397 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 443
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KER L++ +EQ ++ N+
Sbjct: 115 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERFLVRQREQVTTPENINL 174
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 175 DLTYSVLFNLASQYSLNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 230
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 231 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 290
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 291 NLTICYFAVGDREKMKKAFQKLIT 314
>gi|403307656|ref|XP_003944302.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Saimiri boliviensis boliviensis]
Length = 805
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 339 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 398
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 399 EINKAVTYLRQRDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 458
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 459 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 518
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ ++ QA
Sbjct: 519 LDCFLKLHAILRNSAEVLYQIANIYELMENLSQA 552
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 205/403 (50%), Gaps = 82/403 (20%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 115 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQAATPENINL 174
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNW 120
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + + N+
Sbjct: 175 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 230
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD-EMTSSAATNLSFIYFLQ 179
+KA+ F RM A+D + S + +M N+ + L
Sbjct: 231 -------------------SKAIKFYRM-----ALDQVPSVNKQMRIKIMQNIGVTFILA 266
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+ +D NS Y H + A ++A YN
Sbjct: 267 GQY------------SDAINS----------------------YEHIMSM-APNLKAGYN 291
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
L + + + + + F KL A+ + E Y + + D + NL+ EA+
Sbjct: 292 LTVCYFAVGDREKMKKAFQKLIAVPLEIDEDKY-----------ISPSDDPHTNLVTEAI 340
Query: 300 RNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEI 359
+ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DLEI
Sbjct: 341 KNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDLEI 400
Query: 360 NKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
NKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 401 NKAVTYLRQRDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 443
>gi|114648905|ref|XP_509562.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 9
[Pan troglodytes]
Length = 824
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 571
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 462
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 310 NLTICYFAVGDREKMKKAFQKLIT 333
>gi|410220826|gb|JAA07632.1| intraflagellar transport 88 homolog [Pan troglodytes]
Length = 833
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 130/227 (57%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y +A Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLAICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 471
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 319 NLAICYFAVGDREKMKKAFQKLIT 342
>gi|119628674|gb|EAX08269.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
[Homo sapiens]
gi|119628678|gb|EAX08273.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
[Homo sapiens]
Length = 833
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYM 471
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRN--SAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ S + + + N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 319 NLTICYFAIGDREKMKKAFQKLIT 342
>gi|28329439|ref|NP_006522.2| intraflagellar transport protein 88 homolog isoform 2 [Homo
sapiens]
Length = 824
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 571
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 462
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 310 NLTICYFAIGDREKMKKAFQKLIT 333
>gi|28558993|ref|NP_783195.2| intraflagellar transport protein 88 homolog isoform 1 [Homo
sapiens]
gi|206729873|sp|Q13099.2|IFT88_HUMAN RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
Full=Recessive polycystic kidney disease protein Tg737
homolog; AltName: Full=Tetratricopeptide repeat protein
10; Short=TPR repeat protein 10
Length = 833
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 471
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 319 NLTICYFAIGDREKMKKAFQKLIT 342
>gi|332840993|ref|XP_001147729.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 4
[Pan troglodytes]
Length = 833
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 471
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 319 NLTICYFAVGDREKMKKAFQKLIT 342
>gi|119628675|gb|EAX08270.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_e
[Homo sapiens]
Length = 824
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 571
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYM 462
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 310 NLTICYFAIGDREKMKKAFQKLIT 333
>gi|332840996|ref|XP_003314116.1| PREDICTED: intraflagellar transport protein 88 homolog [Pan
troglodytes]
Length = 805
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 339 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 398
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 399 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 458
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 459 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 518
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 519 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 552
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 218 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 277
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 278 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 336
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 337 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 396
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 397 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 443
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 115 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 174
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 175 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 230
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 231 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 290
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 291 NLTICYFAVGDREKMKKAFQKLIT 314
>gi|332260276|ref|XP_003279213.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Nomascus leucogenys]
Length = 832
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDRVPSVNKQMRIKIMQNIGVTFIQAGQYSDAVNSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLIICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDSHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 471
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKHAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K+ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVMLKNN----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S AV+ + M + A
Sbjct: 259 SKAIKFYRMALDRVPSVNKQMRIKIMQNIGVTFIQAGQYSDAVNSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 319 NLIICYFAVGDREKMKK 335
>gi|307195603|gb|EFN77453.1| Intraflagellar transport protein 88-like protein [Harpegnathos
saltator]
Length = 797
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 153/221 (69%), Gaps = 5/221 (2%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
++ND LS+L +EMK EAEK IL +AKLIAP IED + G+ WCV +I++SA+S LA DLE
Sbjct: 346 IKNDDLSKLEKEMKLEAEKTILCAAKLIAPVIEDTLTAGFAWCVDAIKSSAYSFLAADLE 405
Query: 139 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
INKA+ FL + A+D LK + + S+AAT LSFIY+L G+ +QAEK E A
Sbjct: 406 INKAMVFLLNRETQLAIDTLKMFENRDTKANSAAATMLSFIYYL-GDYDQAEKYGEAARN 464
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D YN+AA+VNL CA+ ++++ +EL + AL+ DA+ ++ALYNLGL +K N Y ++L
Sbjct: 465 SDAYNAAAYVNLSACAIKKDEFNIARELLLCALETDASHVQALYNLGLVYKKQNMYEEAL 524
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
ECF K++ IV PE LYQ+ LY++ D +QAS+ LL
Sbjct: 525 ECFWKVRNIVRHDPETLYQLGHLYQLMNDADQASEWYNQLL 565
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
Query: 289 DVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNS 348
D N+L E ++ND LS+L +EMK EAEK IL +AKLIAP IED + G+ WCV +I++S
Sbjct: 336 DAASNILNEVIKNDDLSKLEKEMKLEAEKTILCAAKLIAPVIEDTLTAGFAWCVDAIKSS 395
Query: 349 AHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
A+S LA DLEINKA+ FL + A+D LK + + S+AAT LSFIY+L
Sbjct: 396 AYSFLAADLEINKAMVFLLNRETQLAIDTLKMFENRDTKANSAAATMLSFIYYL 449
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E++I+ LI+ S + A + + ALE+A+ AS++ER LI+LQEQ G +DSHNI
Sbjct: 120 PEEKIKATERKIMSLIESSAVSASENNMRIALERAREASSRERALIRLQEQAGLSDSHNI 179
Query: 64 ELTFS 68
+LTF+
Sbjct: 180 DLTFA 184
>gi|332260274|ref|XP_003279212.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Nomascus leucogenys]
Length = 823
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 571
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDRVPSVNKQMRIKIMQNIGVTFIQAGQYSDAVNSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLIICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDSHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 462
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKHAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K+ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVMLKNN----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S AV+ + M + A
Sbjct: 250 SKAIKFYRMALDRVPSVNKQMRIKIMQNIGVTFIQAGQYSDAVNSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 310 NLIICYFAVGDREKMKK 326
>gi|119628677|gb|EAX08272.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_g
[Homo sapiens]
gi|194374639|dbj|BAG62434.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 339 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 398
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 399 EINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 458
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 459 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 518
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 519 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 552
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 218 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 277
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 278 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 336
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 337 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 396
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 397 DLEINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYM 443
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 115 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 174
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 175 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 230
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 231 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 290
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 291 NLTICYFAIGDREKMKKAFQKLIT 314
>gi|119628671|gb|EAX08266.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_a
[Homo sapiens]
Length = 796
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYM 471
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 319 NLTICYFAIGDREKMKKAFQKLIT 342
>gi|332260278|ref|XP_003279214.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Nomascus leucogenys]
Length = 804
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 339 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 398
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 399 EINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 458
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 459 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 518
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 519 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 552
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 218 MNMGNIYLKQRNYSKAIKFYRMALDRVPSVNKQMRIKIMQNIGVTFIQAGQYSDAVNSYE 277
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 278 HIMSMAPNL-KAGYNLIICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDSHTNLV 336
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 337 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 396
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 397 DLEINKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYM 443
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 115 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKHAGRKERVLVRQREQVTTPENINL 174
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K+ + ++A ++ ++ + N+
Sbjct: 175 DLTYSVLFNLASQYSVNEMYAEALNTYQVMLKNN----MFSNAGILKMNMGNIYLKQRNY 230
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S AV+ + M + A
Sbjct: 231 SKAIKFYRMALDRVPSVNKQMRIKIMQNIGVTFIQAGQYSDAVNSYEHIMSMAPNLKAGY 290
Query: 171 NLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 291 NLIICYFAVGDREKMKK 307
>gi|119628672|gb|EAX08267.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_b
[Homo sapiens]
Length = 795
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYM 471
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNF--SNGY 118
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + + Y
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 119 NWCVQSIR------NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
+ ++ R S + + + N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 319 NLTICYFAIGDREKMKKAFQKLIT 342
>gi|157927998|gb|ABW03295.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic
construct]
gi|157928711|gb|ABW03641.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic
construct]
Length = 824
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK ++TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAIAEKYVMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 571
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAIGDREKMKEAFQKLITVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK ++TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAIAEKYVMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 462
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ ++ ++ T
Sbjct: 310 NLTICYFAIGDREKMKEAFQKLIT 333
>gi|37572247|gb|AAH30776.2| Intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
Length = 833
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK ++TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAIAEKYVMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLTICYFAIGDREKMKEAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK ++TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAIAEKYVMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 471
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ ++ ++ T
Sbjct: 319 NLTICYFAIGDREKMKEAFQKLIT 342
>gi|350422749|ref|XP_003493270.1| PREDICTED: intraflagellar transport protein 88 homolog [Bombus
impatiens]
Length = 796
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/255 (44%), Positives = 164/255 (64%), Gaps = 12/255 (4%)
Query: 48 LIKLQEQFGHADSHNI---ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAK 104
L+++Q D +NI + F+ +N ++ND LS+L +E+K EAEK IL +AK
Sbjct: 319 LLEVQLNIDQEDRYNISTDDAAFNILNE-----ILKNDDLSKLEKELKLEAEKTILCAAK 373
Query: 105 LIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD-- 162
LIAP IED + G+ WCV +I++S + LA DLEI+KA+ FL + A+D LK +
Sbjct: 374 LIAPVIEDTLTAGFAWCVDTIKSSTYGPLAADLEISKAMVFLHNRETQLAIDTLKMFENR 433
Query: 163 --EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
+ SSAAT LSFIYFLQG+ EQAE+ E A AD+YN+AA+VNL CA+ + + +
Sbjct: 434 ESKANSSAATMLSFIYFLQGDYEQAERCGEIARNADSYNAAAYVNLSACAIRKGELNIAR 493
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
EL + +LD DA+ ++ALYNLGL +K N Y ++LECF K++ I P+ +YQI LY++
Sbjct: 494 ELLLCSLDTDASHVQALYNLGLVYKKQNMYEEALECFWKVRNIARHDPQTVYQIGQLYQL 553
Query: 281 TGDVEQASDVNENLL 295
D +QA++ LL
Sbjct: 554 MNDTDQATEWYNQLL 568
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 199/410 (48%), Gaps = 95/410 (23%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E++I+ LI+ S + + + ALE+AK AS++ER LI+LQEQ G +D+HN+
Sbjct: 122 PEEKIKVAERKIMELIESSVQASYENNTRVALERAKEASSRERALIRLQEQAGLSDNHNV 181
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A + M EA IA Q
Sbjct: 182 DLTFA---------VIFNLATQYTNNNMFTEA----------IA-------------TYQ 209
Query: 124 SI-RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSF 174
+I RN S+ A+ L++N +++M +SQA+ + + + +A N+
Sbjct: 210 AITRNRMFSNSAR-LKVNMGNIYVKMGQLSQAIKMYRMAFDQAPAAHKDLRIKIMHNIGM 268
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
++ G +E+A NS +V R ++ G +HA+
Sbjct: 269 LFVQMGRLEEAA------------NSFEWV-----MKERAEFKAG----LHAV------- 300
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI--ASLYEITGDVEQASDVNE 292
L + L+H+ K++ + EV I Y I+ D D
Sbjct: 301 --LCHFALSHRD------------KMKRSFLELLEVQLNIDQEDRYNISTD-----DAAF 341
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSS 352
N+L E ++ND LS+L +E+K EAEK IL +AKLIAP IED + G+ WCV +I++S +
Sbjct: 342 NILNEILKNDDLSKLEKELKLEAEKTILCAAKLIAPVIEDTLTAGFAWCVDTIKSSTYGP 401
Query: 353 LAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
LA DLEI+KA+ FL + A+D LK + + SSAAT LSFIYFL
Sbjct: 402 LAADLEISKAMVFLHNRETQLAIDTLKMFENRESKANSSAATMLSFIYFL 451
>gi|343958710|dbj|BAK63210.1| intraflagellar transport 88 homolog [Pan troglodytes]
Length = 824
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 145/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D Y+ AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYSPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 571
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 462
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 310 NLTICYFAVGDREKMKKAFQKLIT 333
>gi|34365105|emb|CAE45907.1| hypothetical protein [Homo sapiens]
Length = 371
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 141/207 (68%), Gaps = 4/207 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 165 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 224
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 225 EINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 284
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 285 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 344
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEI 280
L+CF KL AI+ + EVLYQIA++Y I
Sbjct: 345 LDCFLKLHAILRNSAEVLYQIANMYLI 371
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 21/204 (10%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ + + F
Sbjct: 78 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQADR-EKMKKAFQ 136
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKC 318
KL + + E Y + + D + NL+ EA++ND L Q+ RE K AEK
Sbjct: 137 KLITVPLEIDEDKY-----------ISPSDDPHTNLVTEAIKNDHLRQMERERKAMAEKY 185
Query: 319 ILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL 378
I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DLEINKAVT+LR D +QAV++L
Sbjct: 186 IMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEIL 245
Query: 379 KSCDE----MTSSAATNLSFIYFL 398
K ++ + S+AATNLS +Y++
Sbjct: 246 KVLEKKDNRVKSAAATNLSALYYM 269
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 30 DFKAALEKAKLASNKERVLIKLQEQFGHADSHNIELTFS 68
D K ALEKAK A KERVL++ +EQ ++ N++LT+S
Sbjct: 1 DLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYS 39
>gi|193785201|dbj|BAG54354.1| unnamed protein product [Homo sapiens]
Length = 795
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 144/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 367 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 426
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV+ LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 427 EINKAVTYLRQKDYNQAVEFLKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 486
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 487 NSDRYNLAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 546
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 547 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 580
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 128/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 246 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 306 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 364
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 365 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 424
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV+ LK ++ + S+AATNLS +Y++
Sbjct: 425 DLEINKAVTYLRQKDYNQAVEFLKVLEKKDNRVKSAAATNLSALYYM 471
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 143 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 202
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 203 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 258
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 259 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 318
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 319 NLTICYFAIGDREKMKKAFQKLIT 342
>gi|119628673|gb|EAX08268.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_c
[Homo sapiens]
Length = 564
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 141/207 (68%), Gaps = 4/207 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEI 280
L+CF KL AI+ + EVLYQIA++Y I
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANMYLI 564
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYM 462
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 310 NLTICYFAIGDREKMKKAFQKLIT 333
>gi|198420279|ref|XP_002129474.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) isoform 1 [Ciona intestinalis]
Length = 833
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 143/214 (66%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A+RND+L QL R K AE+CIL +AK+IAPSIE +FS G++WCV+ ++ S + LA DL
Sbjct: 368 AIRNDSLRQLERSRKLIAERCILAAAKIIAPSIESSFSEGFDWCVEQVKASPYHDLANDL 427
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI+KA+ +L+ D +QAV +LK+ ++ + S AATNLSFIYFLQG E A++ A+ A
Sbjct: 428 EIHKALMYLKERDFNQAVSILKTFEKKDTHVKSQAATNLSFIYFLQGNAENAKRYADAAV 487
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD +N+ + N NC D LY AL+ND++C EALYNLGL +K L DS
Sbjct: 488 KADRFNATSLTNKANCLYREGDAEGAVTLYKEALENDSSCHEALYNLGLVNKSLGRLDDS 547
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+ F KL IV + +V++QIASLYE+ D QA
Sbjct: 548 LDSFMKLHNIVRNSAQVMFQIASLYEMMEDGTQA 581
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + K + Y ALD + T I + N+G + +Y+D++ +
Sbjct: 246 VNIGNIYFKQGQLAKAIKYYRMALDQVQTSHKETRIRIMQNIGAVFVKMGQYNDAVTSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ + P L I + + GD ++ S + E++
Sbjct: 306 HIMSEKPDFQSGLNLILCYFAL-GDKDKMSKAFLKLLSVNLGIEDEDKYTVSTDNAQESV 364
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+A+RND+L QL R K AE+CIL +AK+IAPSIE +FS G++WCV+ ++ S + LA
Sbjct: 365 FLDAIRNDSLRQLERSRKLIAERCILAAAKIIAPSIESSFSEGFDWCVEQVKASPYHDLA 424
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEI+KA+ +L+ D +QAV +LK+ ++ + S AATNLSFIYFL
Sbjct: 425 NDLEIHKALMYLKERDFNQAVSILKTFEKKDTHVKSQAATNLSFIYFL 472
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSH 61
E E K + ME+ I LI+ES I DF A +KA A KER L++ +EQ G ++
Sbjct: 141 ETAEMKIKAMERAIGELIEESAIANNKGDFLTAKQKAIDAGKKERQLVRHREQAGLSEGI 200
Query: 62 NIELTFS 68
++ELTFS
Sbjct: 201 SLELTFS 207
>gi|198420281|ref|XP_002129495.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) isoform 2 [Ciona intestinalis]
Length = 821
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 143/214 (66%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A+RND+L QL R K AE+CIL +AK+IAPSIE +FS G++WCV+ ++ S + LA DL
Sbjct: 368 AIRNDSLRQLERSRKLIAERCILAAAKIIAPSIESSFSEGFDWCVEQVKASPYHDLANDL 427
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI+KA+ +L+ D +QAV +LK+ ++ + S AATNLSFIYFLQG E A++ A+ A
Sbjct: 428 EIHKALMYLKERDFNQAVSILKTFEKKDTHVKSQAATNLSFIYFLQGNAENAKRYADAAV 487
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD +N+ + N NC D LY AL+ND++C EALYNLGL +K L DS
Sbjct: 488 KADRFNATSLTNKANCLYREGDAEGAVTLYKEALENDSSCHEALYNLGLVNKSLGRLDDS 547
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+ F KL IV + +V++QIASLYE+ D QA
Sbjct: 548 LDSFMKLHNIVRNSAQVMFQIASLYEMMEDGTQA 581
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + K + Y ALD + T I + N+G + +Y+D++ +
Sbjct: 246 VNIGNIYFKQGQLAKAIKYYRMALDQVQTSHKETRIRIMQNIGAVFVKMGQYNDAVTSYE 305
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ + P L I + + GD ++ S + E++
Sbjct: 306 HIMSEKPDFQSGLNLILCYFAL-GDKDKMSKAFLKLLSVNLGIEDEDKYTVSTDNAQESV 364
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+A+RND+L QL R K AE+CIL +AK+IAPSIE +FS G++WCV+ ++ S + LA
Sbjct: 365 FLDAIRNDSLRQLERSRKLIAERCILAAAKIIAPSIESSFSEGFDWCVEQVKASPYHDLA 424
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEI+KA+ +L+ D +QAV +LK+ ++ + S AATNLSFIYFL
Sbjct: 425 NDLEIHKALMYLKERDFNQAVSILKTFEKKDTHVKSQAATNLSFIYFL 472
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSH 61
E E K + ME+ I LI+ES I DF A +KA A KER L++ +EQ G ++
Sbjct: 141 ETAEMKIKAMERAIGELIEESAIANNKGDFLTAKQKAIDAGKKERQLVRHREQAGLSEGI 200
Query: 62 NIELTFS 68
++ELTFS
Sbjct: 201 SLELTFS 207
>gi|55725300|emb|CAH89515.1| hypothetical protein [Pongo abelii]
Length = 475
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 144/214 (67%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ E + AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 113 AIKNDHLRQMEHERRAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 172
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 173 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 232
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 233 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 292
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 293 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 326
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 119/204 (58%), Gaps = 21/204 (10%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N+ I+ + N+G+ + + F
Sbjct: 26 MNMGNIYLKQRNYSKAIKFYRMALDQVSSVNNQMRIKIMQNIGVTFIQADR-EKMKKAFQ 84
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKC 318
KL A+ + E Y + + D + NL+ EA++ND L Q+ E + AEK
Sbjct: 85 KLIAVPLEIDEDKY-----------ISPSDDPHTNLVTEAIKNDHLRQMEHERRAMAEKY 133
Query: 319 ILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL 378
I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DLEINKAVT+LR D +QAV++L
Sbjct: 134 IMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEIL 193
Query: 379 KSCDE----MTSSAATNLSFIYFL 398
K ++ + S+AATNLS +Y++
Sbjct: 194 KVLEKKDSRVKSAAATNLSALYYM 217
>gi|755486|gb|AAA86720.1| mutations in the mouse Tg737 gene cause polycystic kidney disease
[Homo sapiens]
Length = 824
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 143/214 (66%), Gaps = 4/214 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I TSAKLIAP IE +F+ G +WCV+ ++ S + LA DL
Sbjct: 358 AIKNDHLRQMERERKAMAEKYITTSAKLIAPVIETSFAAGCDWCVEVVKASQYVELANDL 417
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 418 EINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAV 477
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 478 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 537
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L+CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 538 LDCFLKLHAILRNSAEVLYQIANIYELMENPSQA 571
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 127/227 (55%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 237 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 297 HIMSMAPNL-KAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 355
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I TSAKLIAP IE +F+ G +WCV+ ++ S + LA
Sbjct: 356 TEAIKNDHLRQMERERKAMAEKYITTSAKLIAPVIETSFAAGCDWCVEVVKASQYVELAN 415
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 416 DLEINKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYM 462
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 193
Query: 64 ELTF---SNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+ SN+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 194 DLTYSVLSNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 249
Query: 115 SNGYNWCVQSIRNSAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ + ++I N VTF++ S A++ + M + A
Sbjct: 250 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 309
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 310 NLTICYFAIGDREKMKKAFQKLIT 333
>gi|326434846|gb|EGD80416.1| hypothetical protein PTSG_11061 [Salpingoeca sp. ATCC 50818]
Length = 850
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 156/236 (66%), Gaps = 7/236 (2%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
AV++D L + K +AE+ +L +AKLIAP IE +F+ GY+WC++ ++ SA SSLA +L
Sbjct: 366 AVQDDTLRKHELATKKKAEEFVLKAAKLIAPVIESSFAEGYDWCIERVKGSAFSSLASEL 425
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI KA+T+L++ DV A VLKS ++ M S+AATNLSF+Y L+ +V+QAE+ A+ A
Sbjct: 426 EITKAITYLKLKDVKAAAKVLKSFEKKESNMLSTAATNLSFLYILENDVKQAERYADLAM 485
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD YN A VN GNCA R+ + +ELY AL D++C EAL+NLGL H+ L D+
Sbjct: 486 DADKYNHCALVNKGNCAFMRKRLEEAQELYQEALAIDSSCSEALFNLGLVHRDLGNLEDA 545
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND--ALSQL 307
LE FH++ +VP PEV+ IA+L E D +QA + N L+ V +D AL+ L
Sbjct: 546 LEYFHRVNLLVPDTPEVVAAIAALNEQLDDTDQACEWY-NTLISLVPSDPNALAHL 600
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 126/231 (54%), Gaps = 36/231 (15%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIE-----ALYNLGLAHKHLNEYSDSLECF- 257
VN+GN ++ Y++ + Y ALD + + L N+G A + +Y D+++ F
Sbjct: 240 VNIGNIYFKQQKYLQAVKQYRMALDQIPSVQQEMRSAVLKNIGQAFIRMGQYGDAMKTFE 299
Query: 258 HKLQAIVPS---------------------MPEVLYQIASLYEITGDV-EQASDVNEN-- 293
H L+ P M ++ SL T D E+ +++E+
Sbjct: 300 HVLEETPPGDDFDSALNCLLCYFGLGDREKMKRGFARLLSLQLPTHDEDERYMNIHEDEQ 359
Query: 294 --LLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHS 351
+ L+AV++D L + K +AE+ +L +AKLIAP IE +F+ GY+WC++ ++ SA S
Sbjct: 360 VQIYLDAVQDDTLRKHELATKKKAEEFVLKAAKLIAPVIESSFAEGYDWCIERVKGSAFS 419
Query: 352 SLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
SLA +LEI KA+T+L++ DV A VLKS ++ M S+AATNLSF+Y L
Sbjct: 420 SLASELEITKAITYLKLKDVKAAAKVLKSFEKKESNMLSTAATNLSFLYIL 470
>gi|345481230|ref|XP_001604146.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Nasonia vitripennis]
Length = 786
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 149/221 (67%), Gaps = 4/221 (1%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
V+ND LS+L RE+K AEK IL +A LIAP IE+ + G+ WCV +I++SA+S LA +LE
Sbjct: 344 VKNDDLSKLERELKSNAEKTILNAANLIAPVIEETLAGGFAWCVDAIKSSAYSPLAANLE 403
Query: 139 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
INKA+ FL +V A+D LK + ++ SSA+T LSFI+FL+GE +QAEK +E A
Sbjct: 404 INKAMVFLHNREVRMAIDSLKVFENQDTKINSSASTVLSFIHFLRGEYDQAEKYSEAAKN 463
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD+ N+AA+VNL CA+ + + KE AL+NDA ++ALYNLGL +K N ++L
Sbjct: 464 ADSRNAAAYVNLSACAIMKNELDNAKEYLASALENDAAHVQALYNLGLLYKKKNMLDEAL 523
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
E F KL IV P LYQI +Y+++ DVEQA+D LL
Sbjct: 524 EYFLKLTNIVRYDPLTLYQIGHIYQLSNDVEQAADWYNQLL 564
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 201/408 (49%), Gaps = 91/408 (22%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++ E+ I+ LI+ES A ++ K ALE+A+ AS++ER LI+LQEQ G +DSHNI
Sbjct: 118 PEEKIKQAERRIMTLIEESAKAACEKNMKVALERAREASSRERALIRLQEQAGLSDSHNI 177
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A + E+ EA A A + NF+N
Sbjct: 178 DLTFA---------VIFNLACQYSNNELYTEA------IATYQAITRNRNFTN------- 215
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSFI 175
S R L++N +++M +SQA+ + + + T++A N+ +
Sbjct: 216 SAR----------LKMNIGNIYVKMGQLSQAIKMYQMALDQTTTAQKYLRIKIMHNIGML 265
Query: 176 YFLQGEVEQAEKMAEEACTADT-YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
+ G +E+A E + L + A++ ED K K+ ++ LD
Sbjct: 266 FVQMGRLEEAANSFEWVMREKPDLKAGMHAILCHFALSHED--KMKKAFLELLD------ 317
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENL 294
+ L H ++YS I D D+ N+
Sbjct: 318 -----VPLYIDHDDKYS----------------------------INTD-----DIAANI 339
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L E V+ND LS+L RE+K AEK IL +A LIAP IE+ + G+ WCV +I++SA+S LA
Sbjct: 340 LNETVKNDDLSKLERELKSNAEKTILNAANLIAPVIEETLAGGFAWCVDAIKSSAYSPLA 399
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
+LEINKA+ FL +V A+D LK + ++ SSA+T LSFI+FL
Sbjct: 400 ANLEINKAMVFLHNREVRMAIDSLKVFENQDTKINSSASTVLSFIHFL 447
>gi|345481232|ref|XP_003424321.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Nasonia vitripennis]
Length = 758
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 149/221 (67%), Gaps = 4/221 (1%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
V+ND LS+L RE+K AEK IL +A LIAP IE+ + G+ WCV +I++SA+S LA +LE
Sbjct: 291 VKNDDLSKLERELKSNAEKTILNAANLIAPVIEETLAGGFAWCVDAIKSSAYSPLAANLE 350
Query: 139 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
INKA+ FL +V A+D LK + ++ SSA+T LSFI+FL+GE +QAEK +E A
Sbjct: 351 INKAMVFLHNREVRMAIDSLKVFENQDTKINSSASTVLSFIHFLRGEYDQAEKYSEAAKN 410
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD+ N+AA+VNL CA+ + + KE AL+NDA ++ALYNLGL +K N ++L
Sbjct: 411 ADSRNAAAYVNLSACAIMKNELDNAKEYLASALENDAAHVQALYNLGLLYKKKNMLDEAL 470
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
E F KL IV P LYQI +Y+++ DVEQA+D LL
Sbjct: 471 EYFLKLTNIVRYDPLTLYQIGHIYQLSNDVEQAADWYNQLL 511
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 201/408 (49%), Gaps = 91/408 (22%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++ E+ I+ LI+ES A ++ K ALE+A+ AS++ER LI+LQEQ G +DSHNI
Sbjct: 65 PEEKIKQAERRIMTLIEESAKAACEKNMKVALERAREASSRERALIRLQEQAGLSDSHNI 124
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A + E+ EA A A + NF+N
Sbjct: 125 DLTFA---------VIFNLACQYSNNELYTEA------IATYQAITRNRNFTN------- 162
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSFI 175
S R L++N +++M +SQA+ + + + T++A N+ +
Sbjct: 163 SAR----------LKMNIGNIYVKMGQLSQAIKMYQMALDQTTTAQKYLRIKIMHNIGML 212
Query: 176 YFLQGEVEQAEKMAEEACTADT-YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
+ G +E+A E + L + A++ ED K K+ ++ LD
Sbjct: 213 FVQMGRLEEAANSFEWVMREKPDLKAGMHAILCHFALSHED--KMKKAFLELLD------ 264
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENL 294
+ L H ++YS I D D+ N+
Sbjct: 265 -----VPLYIDHDDKYS----------------------------INTD-----DIAANI 286
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L E V+ND LS+L RE+K AEK IL +A LIAP IE+ + G+ WCV +I++SA+S LA
Sbjct: 287 LNETVKNDDLSKLERELKSNAEKTILNAANLIAPVIEETLAGGFAWCVDAIKSSAYSPLA 346
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
+LEINKA+ FL +V A+D LK + ++ SSA+T LSFI+FL
Sbjct: 347 ANLEINKAMVFLHNREVRMAIDSLKVFENQDTKINSSASTVLSFIHFL 394
>gi|426374888|ref|XP_004054289.1| PREDICTED: intraflagellar transport protein 88 homolog [Gorilla
gorilla gorilla]
Length = 818
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 139/204 (68%), Gaps = 4/204 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 359 AIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 418
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 419 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 478
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+GL ++ LN ++
Sbjct: 479 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEA 538
Query: 254 LECFHKLQAIVPSMPEVLYQIASL 277
L+CF KL +I+ + EVLYQIA++
Sbjct: 539 LDCFLKLHSILRNSAEVLYQIANM 562
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N I+ + N+G+ +YSD++ +
Sbjct: 238 MNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYE 297
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 298 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLV 356
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ RE K AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 357 TEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 416
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 417 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 463
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI + D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 135 PEEKIKQLEKEVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 194
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + N+
Sbjct: 195 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 250
Query: 115 SNGYNWCVQSIRN--SAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AAT 170
S + ++ S + + + N VTF++ S A++ + M + A
Sbjct: 251 SKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGY 310
Query: 171 NLSFIYFLQGEVEQAEKMAEEACT 194
NL+ YF G+ E+ +K ++ T
Sbjct: 311 NLTICYFAVGDREKMKKAFQKLIT 334
>gi|91079140|ref|XP_975466.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) [Tribolium castaneum]
Length = 843
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 157/246 (63%), Gaps = 4/246 (1%)
Query: 76 ARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 135
A A++ND L + + +AE CILT+AKLIAP IED FS GY+WCV SI+NS ++ LA
Sbjct: 372 AMAIQNDDLHKYEIKKCKDAEYCILTAAKLIAPLIEDTFSLGYDWCVMSIKNSEYARLAS 431
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDE---MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
+LEINKAV FL+ N + +A+D LK+ ++ + ++AA NLSFIY+LQG++E A K A+
Sbjct: 432 NLEINKAVMFLKQNQLPEAIDTLKAFEKDSVIATNAAINLSFIYYLQGDIENATKYAQVV 491
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
T T ++ +VNLG C MA+ + +AL+ D T EA+YNLGL K Y++
Sbjct: 492 ETNPTKSADGYVNLGACLMAKGQPEDAINSFKNALELDPTHFEAIYNLGLVLKRQGHYAE 551
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREM 311
+L+CF + + +P V+YQ+A+L E+ GD E A+D+ + LL L AL ++
Sbjct: 552 ALQCFQRFSGSLALLPNVVYQVANLLELKGDSEAAADMYQQLLGLVPTDAGALQKMGELY 611
Query: 312 KHEAEK 317
H+ +K
Sbjct: 612 DHDGDK 617
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 202/412 (49%), Gaps = 100/412 (24%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PE+K + + +I+ L++E+C+ D++ +L KAK ASNKERVLIK+QEQ +D H+I
Sbjct: 149 PEQKIRQQKAKIMQLVEEACVAECEGDYRKSLSKAKEASNKERVLIKMQEQSDLSDLHDI 208
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF + N A E+ EA L++ ++I
Sbjct: 209 DLTFVVLFTLGNQYAAN---------ELYTEA----LSTYQMI----------------- 238
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLK-SCDEMTSSAAT-------NLSFI 175
I+N S+ A L+IN + + AV + + + D+++SS N++ +
Sbjct: 239 -IKNRMFSN-AHRLKINMGNIYFKQGQFQMAVKMYRMALDQVSSSQKNLRIKIMHNIALV 296
Query: 176 YFLQGEVEQAEK-----MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
+ G+ E+A M E+AC A ++L C A ED D
Sbjct: 297 FIKMGQWEEAISSLEYIMGEQAC------HRAGLHLIICCRALEDR-----------DRM 339
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
T L N+ L + +Y ++EQ D
Sbjct: 340 KTAFSMLLNVPLEVEDEEKY--------------------------------NLEQ--DN 365
Query: 291 NENLLLE-AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA 349
E++L+ A++ND L + + +AE CILT+AKLIAP IED FS GY+WCV SI+NS
Sbjct: 366 PEDVLIAMAIQNDDLHKYEIKKCKDAEYCILTAAKLIAPLIEDTFSLGYDWCVMSIKNSE 425
Query: 350 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE---MTSSAATNLSFIYFL 398
++ LA +LEINKAV FL+ N + +A+D LK+ ++ + ++AA NLSFIY+L
Sbjct: 426 YARLASNLEINKAVMFLKQNQLPEAIDTLKAFEKDSVIATNAAINLSFIYYL 477
>gi|270004229|gb|EFA00677.1| hypothetical protein TcasGA2_TC003554 [Tribolium castaneum]
Length = 858
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 157/246 (63%), Gaps = 4/246 (1%)
Query: 76 ARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 135
A A++ND L + + +AE CILT+AKLIAP IED FS GY+WCV SI+NS ++ LA
Sbjct: 387 AMAIQNDDLHKYEIKKCKDAEYCILTAAKLIAPLIEDTFSLGYDWCVMSIKNSEYARLAS 446
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDE---MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
+LEINKAV FL+ N + +A+D LK+ ++ + ++AA NLSFIY+LQG++E A K A+
Sbjct: 447 NLEINKAVMFLKQNQLPEAIDTLKAFEKDSVIATNAAINLSFIYYLQGDIENATKYAQVV 506
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
T T ++ +VNLG C MA+ + +AL+ D T EA+YNLGL K Y++
Sbjct: 507 ETNPTKSADGYVNLGACLMAKGQPEDAINSFKNALELDPTHFEAIYNLGLVLKRQGHYAE 566
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREM 311
+L+CF + + +P V+YQ+A+L E+ GD E A+D+ + LL L AL ++
Sbjct: 567 ALQCFQRFSGSLALLPNVVYQVANLLELKGDSEAAADMYQQLLGLVPTDAGALQKMGELY 626
Query: 312 KHEAEK 317
H+ +K
Sbjct: 627 DHDGDK 632
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 202/412 (49%), Gaps = 100/412 (24%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PE+K + + +I+ L++E+C+ D++ +L KAK ASNKERVLIK+QEQ +D H+I
Sbjct: 164 PEQKIRQQKAKIMQLVEEACVAECEGDYRKSLSKAKEASNKERVLIKMQEQSDLSDLHDI 223
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF + N A E+ EA L++ ++I
Sbjct: 224 DLTFVVLFTLGNQYAAN---------ELYTEA----LSTYQMI----------------- 253
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLK-SCDEMTSSAAT-------NLSFI 175
I+N S+ A L+IN + + AV + + + D+++SS N++ +
Sbjct: 254 -IKNRMFSN-AHRLKINMGNIYFKQGQFQMAVKMYRMALDQVSSSQKNLRIKIMHNIALV 311
Query: 176 YFLQGEVEQAEK-----MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
+ G+ E+A M E+AC A ++L C A ED D
Sbjct: 312 FIKMGQWEEAISSLEYIMGEQAC------HRAGLHLIICCRALEDR-----------DRM 354
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
T L N+ L + +Y ++EQ D
Sbjct: 355 KTAFSMLLNVPLEVEDEEKY--------------------------------NLEQ--DN 380
Query: 291 NENLLLE-AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA 349
E++L+ A++ND L + + +AE CILT+AKLIAP IED FS GY+WCV SI+NS
Sbjct: 381 PEDVLIAMAIQNDDLHKYEIKKCKDAEYCILTAAKLIAPLIEDTFSLGYDWCVMSIKNSE 440
Query: 350 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE---MTSSAATNLSFIYFL 398
++ LA +LEINKAV FL+ N + +A+D LK+ ++ + ++AA NLSFIY+L
Sbjct: 441 YARLASNLEINKAVMFLKQNQLPEAIDTLKAFEKDSVIATNAAINLSFIYYL 492
>gi|410897585|ref|XP_003962279.1| PREDICTED: intraflagellar transport protein 88 homolog [Takifugu
rubripes]
Length = 843
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ R +K +EK I+T+AKLIAP+IE F+ G++W V +++S ++ LA DL
Sbjct: 356 AIQNDKLHQMERNLKQRSEKYIMTAAKLIAPAIETTFAAGFDWSVDVVKSSQYTDLADDL 415
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI KAVT+LR D +QA++ LK+ ++ S+A TNLSF+YFL+ + EQAE+ A+ A
Sbjct: 416 EIIKAVTYLRQKDFNQAIETLKTFEKKDTRAKSTAGTNLSFLYFLEEDYEQAERYADVAM 475
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+ D YN A N G ++DY K E + AL ND++C EALYNLGL +K LN +S
Sbjct: 476 STDRYNPGALNNKGCTVFVKQDYEKAAEFFKEALRNDSSCTEALYNLGLTYKKLNRLEES 535
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYE-ITGDVEQA 287
++CF K AI+ + EV+YQ+A+LY + D +QA
Sbjct: 536 VDCFLKHHAILRNSAEVMYQLANLYPSLLEDPQQA 570
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 125/233 (53%), Gaps = 34/233 (14%)
Query: 199 NSAAF-VNLGNCAMAREDYVKGKELYVHALDNDATCIEALY-----NLGLAHKHLNEYSD 252
N+ F V++ N + +++Y++ +LY ALD + L N+GL + +Y
Sbjct: 229 NAGRFNVSMANIYVKQQNYMEAIKLYQKALDQIPNTFKELKMKIMENIGLVFVRIGQYPK 288
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS-----------------------D 289
++ F + + P+ + Y + Y GD E+ D
Sbjct: 289 AIIYFEDIMSQSPNT-KTGYNLVLCYYAIGDKERMKKGFQKLISVPLSFDEDKYIPSNDD 347
Query: 290 VNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA 349
+ ++ EA++ND L Q+ R +K +EK I+T+AKLIAP+IE F+ G++W V +++S
Sbjct: 348 DSTDMFTEAIQNDKLHQMERNLKQRSEKYIMTAAKLIAPAIETTFAAGFDWSVDVVKSSQ 407
Query: 350 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
++ LA DLEI KAVT+LR D +QA++ LK+ ++ S+A TNLSF+YFL
Sbjct: 408 YTDLADDLEIIKAVTYLRQKDFNQAIETLKTFEKKDTRAKSTAGTNLSFLYFL 460
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E+++ L+ ESC+ + +F+ ALEKAK AS KER L++ +EQ AD NI
Sbjct: 132 PEEKIKILEKKVNDLVLESCMAQSSGNFQLALEKAKEASRKERTLVRQREQSDKADQINI 191
Query: 64 EL 65
+L
Sbjct: 192 DL 193
>gi|332020497|gb|EGI60912.1| Intraflagellar transport protein 88-like protein [Acromyrmex
echinatior]
Length = 801
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 154/221 (69%), Gaps = 4/221 (1%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
++ND LS+L +EMK EAEK IL +AKLIAP IE++ + G+ WCV +I++SA+S LA DLE
Sbjct: 349 IKNDDLSKLEKEMKLEAEKTILCAAKLIAPVIEESLTAGFAWCVDAIKSSAYSILAADLE 408
Query: 139 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
INKA+ FL + A+D LK + + S AAT LSFIY+LQG+ +QAEK E A
Sbjct: 409 INKAMVFLHNRETQLAIDTLKMFENRDTKANSGAATMLSFIYYLQGDYDQAEKYGEAARN 468
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD YN+AA+VNL CA+ +++ +EL + AL+ DA+ ++ALYNLGL +K N Y ++L
Sbjct: 469 ADAYNAAAYVNLSACAIKKDELNVARELLLCALETDASHVQALYNLGLVYKKENMYEEAL 528
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
ECF K++ IV P+ LYQI LY++ D++QAS+ LL
Sbjct: 529 ECFWKIRNIVRHDPQTLYQIGHLYQLMRDIDQASEWYNQLL 569
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 204/410 (49%), Gaps = 93/410 (22%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E+ I+GLI+ S A + K ALE+A+ AS++ER LI+LQEQ G +D+HNI
Sbjct: 121 PEEKIKTTERRIMGLIENSVQAASENNIKIALERAREASSRERALIRLQEQAGLSDNHNI 180
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A+ + EM EA IA Q
Sbjct: 181 DLTFA---------VLFNLAVQYTNNEMYTEA----------IA-------------TYQ 208
Query: 124 SI-RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSF 174
+I RN S+ A+ L++N ++RM +SQA+ + + + +A N+
Sbjct: 209 AITRNRMFSNSAR-LKVNMGNIYVRMGQLSQAIKMYRMAFDQAPTAHKDLRIKIMHNMGM 267
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
++ G +E+A NS +V R ++ G +HA+
Sbjct: 268 LFVQMGRLEEAA------------NSFEWV-----MRERSEFNAG----LHAV------- 299
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI--ASLYEITGDVEQASDVNE 292
L + L+H+ K++ + EV + Y I + + DV
Sbjct: 300 --LCHFALSHRD------------KMKRAFLELLEVQLNVDQEDKYSINPETD---DVAS 342
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSS 352
N+L E ++ND LS+L +EMK EAEK IL +AKLIAP IE++ + G+ WCV +I++SA+S
Sbjct: 343 NILNEVIKNDDLSKLEKEMKLEAEKTILCAAKLIAPVIEESLTAGFAWCVDAIKSSAYSI 402
Query: 353 LAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
LA DLEINKA+ FL + A+D LK + + S AAT LSFIY+L
Sbjct: 403 LAADLEINKAMVFLHNRETQLAIDTLKMFENRDTKANSGAATMLSFIYYL 452
>gi|307174515|gb|EFN64974.1| Intraflagellar transport protein 88-like protein [Camponotus
floridanus]
Length = 779
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 151/221 (68%), Gaps = 4/221 (1%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+RND LS L +EMK EAEK IL +AKLIAP IED + G+ WCV +I++SA+ LA DLE
Sbjct: 327 IRNDNLSILEKEMKLEAEKSILCAAKLIAPVIEDTLTAGFAWCVDAIKSSAYGVLAADLE 386
Query: 139 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
INKA+ FL + A+D LK + + S+AAT LSFIY+LQG+ +QAEK E A
Sbjct: 387 INKAMVFLHNRETQLAIDTLKMFENRDTKANSAAATMLSFIYYLQGDYDQAEKYGEAARN 446
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD YN+AA+VNL CA+ +++ +EL + AL+ DA+ ++ALYNLGL +K Y ++L
Sbjct: 447 ADAYNAAAYVNLSACAIKKDELNIARELLLCALETDASHVQALYNLGLVYKKQTMYEEAL 506
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
ECF K++ IV P+ LYQI LY++ DV+QAS+ LL
Sbjct: 507 ECFWKIRNIVRHDPQTLYQIGHLYQLMNDVDQASEWYNQLL 547
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 120/233 (51%), Gaps = 33/233 (14%)
Query: 199 NSAAF-VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAH---KHLNE 249
NSA VN+GN + + ++Y A D T I+ ++N+G+ L E
Sbjct: 198 NSARLKVNMGNIYVKMGQLSQAIKMYRMAFDQAPTVHKDLRIKIMHNMGMLFVQMGRLEE 257
Query: 250 YSDSLECFHKLQA-IVPSMPEVLYQIA------------SLYEITGDVEQ-------ASD 289
+ S E + +A + VL A L ++ +V+Q D
Sbjct: 258 AASSFEWVMRERAEFKAGLHAVLCHFALSHRDKMKRAFLELLDVQLNVDQEDKYSINPDD 317
Query: 290 VNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA 349
N+L E +RND LS L +EMK EAEK IL +AKLIAP IED + G+ WCV +I++SA
Sbjct: 318 AATNILNEVIRNDNLSILEKEMKLEAEKSILCAAKLIAPVIEDTLTAGFAWCVDAIKSSA 377
Query: 350 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
+ LA DLEINKA+ FL + A+D LK + + S+AAT LSFIY+L
Sbjct: 378 YGVLAADLEINKAMVFLHNRETQLAIDTLKMFENRDTKANSAAATMLSFIYYL 430
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 42/191 (21%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E++I+GLI+ S A + + ALE+A+ AS++ER LI+LQEQ G +D+HNI
Sbjct: 101 PEEKIKAAERKIMGLIESSAEAASENNMRIALERAREASSRERALIRLQEQAGLSDNHNI 160
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A+ + EM EA IA Q
Sbjct: 161 DLTFA---------VLFNLAVQYTNNEMYTEA----------IA-------------TYQ 188
Query: 124 SI-RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSF 174
+I RN S+ A+ L++N +++M +SQA+ + + + + N+
Sbjct: 189 AITRNRMFSNSAR-LKVNMGNIYVKMGQLSQAIKMYRMAFDQAPTVHKDLRIKIMHNMGM 247
Query: 175 IYFLQGEVEQA 185
++ G +E+A
Sbjct: 248 LFVQMGRLEEA 258
>gi|167534662|ref|XP_001749006.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772430|gb|EDQ86081.1| predicted protein [Monosiga brevicollis MX1]
Length = 762
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 156/235 (66%), Gaps = 5/235 (2%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
AV++D L L R K AE+ +L +A+LIAP IE +F++G++WC++ I+ SA + LA +L
Sbjct: 294 AVKDDQLRGLERRAKKHAERYLLLAARLIAPLIESDFADGFDWCIEKIKASAFNPLASEL 353
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI+KA+++L++ + +AV +LK ++ M S+AATNL+F+Y L+ + QAE+ A+ A
Sbjct: 354 EIHKALSYLKVKEFKKAVKLLKGFEKKESHMLSTAATNLAFLYALETDYTQAEEYADRAI 413
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AD YN A VN GNC +A++ + + E Y AL D+ C EALYNLGLAH+ L + ++
Sbjct: 414 QADKYNPNAMVNKGNCLLAQDKHAEAIEFYHEALAVDSGCFEALYNLGLAHRRLGDLDEA 473
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLH 308
L+CF KL ++P EV+YQ+A++YE D +Q+ + E L+ VR D + H
Sbjct: 474 LDCFLKLADMLPEHAEVVYQVAAVYEELEDFDQSCEWFET-LIGLVRTDPNALRH 527
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 37/265 (13%)
Query: 170 TNLSFIYFLQGEVEQAEK---MAEEACTADT--YNSAAFVNLGNCAMAREDYVKGKELYV 224
N+ IYF QG+ QA K M+ + +D + N+ +C + Y + Y
Sbjct: 135 VNIGNIYFKQGKHLQAVKQYRMSLDQIPSDQQQLKNRVLKNIAHCFVKMGQYADAMKTYE 194
Query: 225 HALD-------NDATCIEALYN---LGLAHKHL---------NEYSDSLECFHKLQAIVP 265
H L+ D + A + G A + + N++ + C AI
Sbjct: 195 HVLEQTPIRVHGDMCVVPATHRSIACGRAEQEMEGMEEREPGNDFQTAFNCILCYVAIGE 254
Query: 266 S--MPEVLYQIASLYEITGDVEQ------ASDVNENLLLEAVRNDALSQLHREMKHEAEK 317
M ++ SL ++ GD + D + L+AV++D L L R K AE+
Sbjct: 255 RDRMKRGFIRMLSL-QLDGDPDGDKYLNVQDDSQVQMFLDAVKDDQLRGLERRAKKHAER 313
Query: 318 CILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDV 377
+L +A+LIAP IE +F++G++WC++ I+ SA + LA +LEI+KA+++L++ + +AV +
Sbjct: 314 YLLLAARLIAPLIESDFADGFDWCIEKIKASAFNPLASELEIHKALSYLKVKEFKKAVKL 373
Query: 378 LKSCDE----MTSSAATNLSFIYFL 398
LK ++ M S+AATNL+F+Y L
Sbjct: 374 LKGFEKKESHMLSTAATNLAFLYAL 398
>gi|297693599|ref|XP_002824108.1| PREDICTED: LOW QUALITY PROTEIN: intraflagellar transport protein 88
homolog [Pongo abelii]
Length = 840
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 140/217 (64%), Gaps = 7/217 (3%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ E + AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 371 AIKNDHLRQMEHERRAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDL 430
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++ + QA A+ A
Sbjct: 431 EINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAV 490
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D YN AA N GN A DY K E Y AL ND++C EALYN+G A + S
Sbjct: 491 NSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGKALTYEKTKSGX 550
Query: 254 L---ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ +CF KL AI+ + EVLYQIA++YE+ + QA
Sbjct: 551 MRLWDCFLKLSAILRNSAEVLYQIANIYELMENPSQA 587
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 129/227 (56%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN + + +Y K + Y ALD N+ I+ + N+G+ +YSD++ +
Sbjct: 250 MNMGNIYLKQRNYSKAIKFYRMALDQVSSVNNQMRIKIMQNIGVTFIQAGQYSDAINSYE 309
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ-----------------------ASDVNENLL 295
+ ++ P++ + Y + Y GD E+ + D + NL+
Sbjct: 310 HIMSMAPNL-KAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLV 368
Query: 296 LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
EA++ND L Q+ E + AEK I+TSAKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 369 TEAIKNDHLRQMEHERRAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELAN 428
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKAVT+LR D +QAV++LK ++ + S+AATNLS +Y++
Sbjct: 429 DLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYM 475
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 103/201 (51%), Gaps = 25/201 (12%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+E+ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 147 PEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 206
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNW 120
+LT+S N+ + + + +AL+ +K++ + ++A ++ ++ + + N+
Sbjct: 207 DLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNK----MFSNAGILKMNMGNIYLKQRNY 262
Query: 121 C------------VQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS- 167
V S+ N + Q++ VTF++ S A++ + M +
Sbjct: 263 SKAIKFYRMALDQVSSVNNQMRIKIMQNI----GVTFIQAGQYSDAINSYEHIMSMAPNL 318
Query: 168 -AATNLSFIYFLQGEVEQAEK 187
A NL+ YF G+ E+ +K
Sbjct: 319 KAGYNLTICYFAVGDREKMKK 339
>gi|358342615|dbj|GAA31648.2| intraflagellar transport protein 88 homolog [Clonorchis sinensis]
Length = 852
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 144/224 (64%), Gaps = 13/224 (5%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+RND L ++ K EAE I +AKLIAP+IE NF+ GY+WC++ ++ S + +A DLE
Sbjct: 363 IRNDELRLFEKKRKAEAENFIKLAAKLIAPAIESNFNTGYDWCIEQVKMSMYHEIANDLE 422
Query: 139 INKAVTFLRMNDVSQ---------AVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQA 185
I+KAV +L+ D Q A++ LKS + + S+AATNLSF++FL+G++ QA
Sbjct: 423 IDKAVMYLKQRDFHQDGGKSLHTKAIETLKSFERKDARVASTAATNLSFLHFLEGDLTQA 482
Query: 186 EKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHK 245
++ A++A AD YN +A VN GN +++Y + ++ Y AL +D++C+EALYNLGL K
Sbjct: 483 DRYADQALAADRYNPSALVNKGNVLFKQQNYERARDCYAEALQDDSSCVEALYNLGLVCK 542
Query: 246 HLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L Y ++LE F KL A++ + V+YQI +YE D QA +
Sbjct: 543 KLERYEEALEAFFKLHAVLRNSAPVVYQIMDIYEKIDDSAQAQE 586
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 43/237 (18%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN A+++Y K + Y LD + + I+ + N+G+ L ++S+++ F
Sbjct: 240 VNIGNIYFAQKNYSKAIKFYRMGLDQLPNTHKSMRIKIMQNIGITFVKLGQFSEAITSFE 299
Query: 259 KLQAIVPSMPEVLYQIASLYEITGD------------------------VEQASDVNENL 294
+ P + + + + Y +TGD + D L
Sbjct: 300 HIMQEEPDV-KTGFNLILCYFLTGDRNKMKYAFQQLLRVDLHLDDEDRYLSHNDDKQYEL 358
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+LE +RND L ++ K EAE I +AKLIAP+IE NF+ GY+WC++ ++ S + +A
Sbjct: 359 ILEVIRNDELRLFEKKRKAEAENFIKLAAKLIAPAIESNFNTGYDWCIEQVKMSMYHEIA 418
Query: 355 QDLEINKAVTFLRMNDVSQ---------AVDVLKSCD----EMTSSAATNLSFIYFL 398
DLEI+KAV +L+ D Q A++ LKS + + S+AATNLSF++FL
Sbjct: 419 NDLEIDKAVMYLKQRDFHQDGGKSLHTKAIETLKSFERKDARVASTAATNLSFLHFL 475
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ ME+ + LI+ESCI A + A EKAK A KERVL++ +EQ G AD N+
Sbjct: 137 PEERIRAMEKGVNQLIEESCIAACRGEITIAFEKAKEAGRKERVLVRQREQLGVADQINL 196
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + A + +AL+ ++++ + A + +I + N+
Sbjct: 197 DLTYSVLFNLANRYTASGMYQEALNTYQAIVRNK----LFAHAGRLKVNIGNIYFAQKNY 252
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC--DEMTSSAA 169
S Y + + N+ H S+ + N +TF+++ S+A+ + +E
Sbjct: 253 SKAIKFYRMGLDQLPNT-HKSMRIKIMQNIGITFVKLGQFSEAITSFEHIMQEEPDVKTG 311
Query: 170 TNLSFIYFLQGE 181
NL YFL G+
Sbjct: 312 FNLILCYFLTGD 323
>gi|328768058|gb|EGF78105.1| hypothetical protein BATDEDRAFT_13321 [Batrachochytrium
dendrobatidis JAM81]
Length = 709
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 156/243 (64%), Gaps = 8/243 (3%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHS-SLAQDLEIN 140
DAL + R+ +E+ I+ +AKLI+PSI+ F+ GYNW + +++ SA + +A +LEI+
Sbjct: 271 DALRSIARDRARASERYIIQAAKLISPSIDTTFTLGYNWVIDALKTSASNFDMASELEIS 330
Query: 141 KAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
K++ +L+ D +QA++ LK+ ++ + +AATNLSF+YFL+G+ +Q+E+ A+ A D
Sbjct: 331 KSIHYLKNKDFTQAIETLKTFEKKDPKLVGTAATNLSFLYFLEGDYKQSERYADTAIEHD 390
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
YN+ A N GNC + Y + ++ Y A++ DA C EA+YNLGL +K +N Y+++L+
Sbjct: 391 RYNAKAQTNRGNCDFVKGKYDQARDRYHEAINVDAICTEAMYNLGLVYKRMNNYNEALQW 450
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA--LSQLHREMKHE 314
F KL +I+ S PEV+YQIA +Y G +QA + N+L+ V D L +L + +
Sbjct: 451 FEKLHSILRSSPEVIYQIADIYNQQGSTQQAMEWF-NILISVVPTDPSVLEKLGSMFERD 509
Query: 315 AEK 317
+K
Sbjct: 510 GDK 512
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 121/232 (52%), Gaps = 40/232 (17%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + Y + ++Y ALD N ++ + N+G A + ++ D++
Sbjct: 144 VNMGNIYFEQCKYGQAVKMYRMALDQIPSTNRDFRLKIMRNIGSAFIKMGQFQDAITS-- 201
Query: 259 KLQAIVPSMPE--VLYQIASLYEITGDVEQAS--------------DVNENLLLEAVRN- 301
L+AI+ P+ + + Y GD ++ + NE+ L + ++
Sbjct: 202 -LEAIMEGNPDHHTGFNLILCYFAIGDKDKMKKGFQRIISIVTPMIEQNEDALDPSTKDE 260
Query: 302 ----------DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHS 351
DAL + R+ +E+ I+ +AKLI+PSI+ F+ GYNW + +++ SA +
Sbjct: 261 PIEDHQVFNEDALRSIARDRARASERYIIQAAKLISPSIDTTFTLGYNWVIDALKTSASN 320
Query: 352 -SLAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
+A +LEI+K++ +L+ D +QA++ LK+ + ++ +AATNLSF+YFL
Sbjct: 321 FDMASELEISKSIHYLKNKDFTQAIETLKTFEKKDPKLVGTAATNLSFLYFL 372
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E+++ +I+ES A +F+ AL+KAK A KER L K +E+ D N+
Sbjct: 41 PEEKIKVLERKVGHIIEESAFLAAEGNFQQALDKAKEAGKKERQLSKQREELNLGDQINL 100
Query: 64 ELTF 67
+LT+
Sbjct: 101 DLTY 104
>gi|449681490|ref|XP_002163424.2| PREDICTED: intraflagellar transport protein 88 homolog, partial
[Hydra magnipapillata]
Length = 557
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 148/225 (65%), Gaps = 4/225 (1%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A+R+D+L + +++ + AE+ I +AKLIAP IED F G++WC ++ S + LA +L
Sbjct: 51 AIRDDSLRRYNKQKQLNAERYITMAAKLIAPVIEDGFDEGFDWCTDIVKASPYIELANEL 110
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI +++ +L+ D ++A +LK ++ M S AA NLSF+YFL+G+V Q++K AE A
Sbjct: 111 EITRSLVYLKQKDFTKAAQILKKFEKKSSKMQSQAAVNLSFLYFLEGDVAQSDKHAEIAI 170
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
++D YN AA +N GN +Y+K K+ Y AL+ +A+C EAL+NLGL +K ++++ ++
Sbjct: 171 SSDRYNPAALLNKGNAEYYNGNYLKAKDYYAEALNIEASCTEALHNLGLCYKKMSKFDEA 230
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEA 298
LECFHKL ++P+ EV+ QI +Y +T ++ +++ ++
Sbjct: 231 LECFHKLNLVLPNNAEVICQIGQMYLLTYIIDCVKNLSNQIMFRG 275
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 77/116 (66%), Gaps = 4/116 (3%)
Query: 287 ASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIR 346
A+D + ++L+A+R+D+L + +++ + AE+ I +AKLIAP IED F G++WC ++
Sbjct: 40 ANDHHGQMVLDAIRDDSLRRYNKQKQLNAERYITMAAKLIAPVIEDGFDEGFDWCTDIVK 99
Query: 347 NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
S + LA +LEI +++ +L+ D ++A +LK + +M S AA NLSF+YFL
Sbjct: 100 ASPYIELANELEITRSLVYLKQKDFTKAAQILKKFEKKSSKMQSQAAVNLSFLYFL 155
>gi|170044670|ref|XP_001849962.1| tetratricopeptide repeat protein 10 [Culex quinquefasciatus]
gi|167867727|gb|EDS31110.1| tetratricopeptide repeat protein 10 [Culex quinquefasciatus]
Length = 787
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 146/215 (67%), Gaps = 6/215 (2%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+++D L ++++H AEK IL SA LI+ I+D F++GY+WCV++I+NS SSLA DLE
Sbjct: 334 IKSDELHAYEQKIRHLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSSLAVDLE 393
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFLQGEVEQAEKMAEEACT 194
+ KAV +L+ +D+ QA+D LK ++ S +AA NLSFI+ L+ ++ AE A+ A
Sbjct: 394 LKKAVIYLKQDDIQQAIDTLKYFEKKESNIAINAAINLSFIHILKKDITTAESYADTAKK 453
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D+Y AAF+N G C+M +ED K ++++ALD D+T EALYN+GL K L ++++SL
Sbjct: 454 IDSYCPAAFINSGVCSMMKEDLETAKLMFMNALDIDSTSFEALYNIGLIFKKLGDHNNSL 513
Query: 255 ECFHKLQAIVP--SMPEVLYQIASLYEITGDVEQA 287
F K+ + + PEVLYQIASLY++ GDV A
Sbjct: 514 LYFRKIISNLGHEQHPEVLYQIASLYDLLGDVGTA 548
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEAL-----YNLGLAHKHLNEYSDSLECFH 258
+N+GN Y K ++Y ALD + + L +N+G+ + +YSD+ F
Sbjct: 211 INMGNIYFQLGLYTKAIKMYRMALDQVPSNQKELRLKITHNIGILFIKMGQYSDAATSFE 270
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL---------------------- 296
+ + + L+ I Y + GDVE+ + LL
Sbjct: 271 FIMSEKGDLKTGLHLILCYYAL-GDVEKIKHAFQLLLDIQVDYLEDEKVFQTNSTPSYEY 329
Query: 297 --EAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
E +++D L ++++H AEK IL SA LI+ I+D F++GY+WCV++I+NS SSLA
Sbjct: 330 INEMIKSDELHAYEQKIRHLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSSLA 389
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFL 398
DLE+ KAV +L+ +D+ QA+D LK ++ S +AA NLSFI+ L
Sbjct: 390 VDLELKKAVIYLKQDDIQQAIDTLKYFEKKESNIAINAAINLSFIHIL 437
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARN--QDFKAALEKAKLASNKERVLIKLQEQFGHAD 59
E PE++++ ME +I L++ES I + D A L KAK AS+ +R L+++++Q G
Sbjct: 104 ETPEQRYKNMETKIYALLEESIIASTGAKPDMSAGLAKAKEASSLDRTLLRMRDQDGGTY 163
Query: 60 SHNIELTF 67
+HN +LTF
Sbjct: 164 THNFDLTF 171
>gi|157167306|ref|XP_001658608.1| tetratricopeptide repeat protein 10, tpr10 [Aedes aegypti]
gi|108876324|gb|EAT40549.1| AAEL007730-PA [Aedes aegypti]
Length = 800
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 147/223 (65%), Gaps = 6/223 (2%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+++D L ++++H AEK IL SA LI+ I+D F++GY+WCV++I+NS SSLA DLE
Sbjct: 334 IKSDELHVYEQKIRHLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSSLAVDLE 393
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFLQGEVEQAEKMAEEACT 194
+ KAV +L+ +D+ QA++ LK ++ S +AA NLSFI+ L+ ++ AE AE A
Sbjct: 394 LKKAVIYLKQDDIQQAIETLKYFEKKESNIAINAAINLSFIHILKKDIATAETYAETAKK 453
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D+Y AAF+N G C + + D K ++ +ALD D+T EALYN+GL K L ++++SL
Sbjct: 454 IDSYCPAAFINSGVCNLLKNDLETAKLMFFNALDIDSTSFEALYNIGLIFKKLGDHNNSL 513
Query: 255 ECFHKLQAIVP--SMPEVLYQIASLYEITGDVEQASDVNENLL 295
F K+ + + PEVLYQIASLY++ GDV A + + LL
Sbjct: 514 LYFRKIISNLGHEQHPEVLYQIASLYDLLGDVGTALEYHLQLL 556
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 120/228 (52%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEAL-----YNLGLAHKHLNEYSDSLECFH 258
+N+GN Y K ++Y ALD + + L +N+G+ + +YSD+ F
Sbjct: 211 INMGNIYFHLGLYTKAIKMYRMALDQVPSNQKELRLKITHNIGILFIKMGQYSDAATSFE 270
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA------------------------SDVNENL 294
+ + + L+ I Y + GDVE+ S+ +
Sbjct: 271 FIMSEKGDLKTGLHLILCYYAL-GDVEKIKHAFQLLLDIQIDYLEDDKIFQTNSNPSYEY 329
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+ E +++D L ++++H AEK IL SA LI+ I+D F++GY+WCV++I+NS SSLA
Sbjct: 330 INEMIKSDELHVYEQKIRHLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSSLA 389
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFL 398
DLE+ KAV +L+ +D+ QA++ LK ++ S +AA NLSFI+ L
Sbjct: 390 VDLELKKAVIYLKQDDIQQAIETLKYFEKKESNIAINAAINLSFIHIL 437
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQ--DFKAALEKAKLASNKERVLIKLQEQFGHAD 59
E PE++++ ME +I L++ES I + D A L KAK AS +R L+++++Q G
Sbjct: 104 ETPEQRYKNMETKIYALLEESIIASTGPKPDMLAGLAKAKEASAMDRTLLRMRDQDGGTY 163
Query: 60 SHNIELTF 67
+HN +LTF
Sbjct: 164 THNFDLTF 171
>gi|145503651|ref|XP_001437800.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404956|emb|CAK70403.1| unnamed protein product [Paramecium tetraurelia]
Length = 743
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 139/210 (66%), Gaps = 5/210 (2%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
D L + +E + EA I+T+AKLIAP IED+ GY W ++ ++NS ++EI K
Sbjct: 318 DKLREDTKERRREAIYYIVTAAKLIAPLIEDDIIIGYEWILEQLKNSTFPEAETEIEICK 377
Query: 142 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
A+ FL+ ++ ++++ LK + ++ + ATN+SF+YFL+ + +QAEK AE A T D
Sbjct: 378 AMAFLKKKNIEKSIETLKGFEKKDKQIMARIATNISFLYFLENDYKQAEKYAEIAITYDR 437
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
YN+ A VN GNC + ++++ KE Y+ A+ +A CIEALYNL ++ LN + +SL+
Sbjct: 438 YNAKALVNRGNCLYVKNEFLRAKEQYLEAIGVEADCIEALYNLAYVNRKLNMFVESLQAL 497
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
KLQ IV +PEVLYQ+A+LYE+TG+ +QA
Sbjct: 498 DKLQTIV-CIPEVLYQMATLYEMTGNSKQA 526
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 27/221 (12%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-NDATCIEALY----NLGLAHKHLNE--YSDSLEC 256
VN+GN ++ Y+ ++Y ALD AT E + N+G A + + +++
Sbjct: 199 VNMGNIYFEQKKYLTAIKMYKMALDLIPATSKEMRFKIQKNIGHAQVRIGKEKIKEAITT 258
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN--------------- 301
+ ++ P P + LY ++G+ + D LL +
Sbjct: 259 YEQILKNSPDFPTGFNLMICLY-LSGNKNKMKDYFVTLLTIEIPGENEEENNENKGTTIT 317
Query: 302 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 361
D L + +E + EA I+T+AKLIAP IED+ GY W ++ ++NS ++EI K
Sbjct: 318 DKLREDTKERRREAIYYIVTAAKLIAPLIEDDIIIGYEWILEQLKNSTFPEAETEIEICK 377
Query: 362 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
A+ FL+ ++ ++++ LK + ++ + ATN+SF+YFL
Sbjct: 378 AMAFLKKKNIEKSIETLKGFEKKDKQIMARIATNISFLYFL 418
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+F+ +E+EI LI++S + + LEKAK A NKE+ L + +E A+S N
Sbjct: 96 PEEQFKSIEKEINNLIEQSAMAKLRGNLSECLEKAKEAFNKEKKLRQSKEAQNLAESINT 155
Query: 64 ELTF 67
+L++
Sbjct: 156 DLSY 159
>gi|444706223|gb|ELW47572.1| Intraflagellar transport protein 88 like protein, partial [Tupaia
chinensis]
Length = 614
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 4/179 (2%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 325 AIKNDPLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 384
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L+ + QA A+ A
Sbjct: 385 EINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENDFAQASSYADLAV 444
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
AD YN +A N GN A DY K E Y AL ND++C EALYN+G K L+ Y D
Sbjct: 445 NADRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGNYQKALDTYKD 503
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 129/228 (56%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+ + +YSD++ +
Sbjct: 203 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIAVTFIKTGQYSDAINSYE 262
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + + GD E+ + D + NL
Sbjct: 263 HIMSMGPNLKAGFNLILSYFAV-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 321
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA
Sbjct: 322 VIEAIKNDPLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELA 381
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QAV+ LK ++ + S+AATNLSF+Y+L
Sbjct: 382 NDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYL 429
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESC D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 100 PEEKIRQLEKKVNELVEESCFANSCGDLKLALEKAKEAGRKERVLVRQREQVTSPENINL 159
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S N+ + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 160 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 215
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
S Y + I S H + + N AVTF++ S A++ + M + A
Sbjct: 216 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIAVTFIKTGQYSDAINSYEHIMSMGPNLKAG 274
Query: 170 TNLSFIYFLQGEVEQAEK 187
NL YF G+ E+ +K
Sbjct: 275 FNLILSYFAVGDREKMKK 292
>gi|158295680|ref|XP_556988.3| AGAP006324-PA [Anopheles gambiae str. PEST]
gi|157016153|gb|EAL40045.3| AGAP006324-PA [Anopheles gambiae str. PEST]
Length = 809
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 142/223 (63%), Gaps = 6/223 (2%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+++D L R+++H AEK IL SA LI+ I+D F++GY+WCV++I+NS SSLA DLE
Sbjct: 356 IKSDELHSYERKLRHLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSSLATDLE 415
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFLQGEVEQAEKMAEEACT 194
+ KAV +L+ +D QA+D LK ++ S +AA NLSFIY L+ +V AE AE A
Sbjct: 416 LKKAVIYLKQDDFQQAIDTLKYFEKKESNIAINAAINLSFIYILKKDVAAAENYAEAAKK 475
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D+Y AAF+N G C R DY K ++ ALD D+T EALYN+GL K L +++ +L
Sbjct: 476 IDSYCPAAFINSGVCCYLRADYETAKLMFTSALDIDSTSFEALYNMGLIFKQLGDHNSAL 535
Query: 255 ECFHKLQAIVP--SMPEVLYQIASLYEITGDVEQASDVNENLL 295
F KL + + PEVLYQIASLY+ GDV A + LL
Sbjct: 536 IYFRKLISSLGHEQHPEVLYQIASLYDALGDVGTALEYYLQLL 578
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 56/250 (22%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEAL-----YNLGLAHKHLNEYSDSLECFH 258
+N+GN Y K ++Y ALD + L +N+G+ + +YSD+ F
Sbjct: 211 INMGNIYFQLGLYTKAIKMYRMALDQVPGNQKELRLKITHNIGILFIRMGQYSDAATSFE 270
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS-----------DVNE--------------N 293
+ + + L+ I Y + GDVE+ D NE
Sbjct: 271 FIMSEKGDLKTGLHLILCYYAL-GDVEKIKHAFQLLLDIQIDYNEEEKAFQANVRAGDGG 329
Query: 294 LLL---------------------EAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 332
+LL E +++D L R+++H AEK IL SA LI+ I+D
Sbjct: 330 VLLGYQLNFTIYFPQSNPAYEYINEMIKSDELHSYERKLRHLAEKNILISANLISTIIDD 389
Query: 333 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS----SA 388
F++GY+WCV++I+NS SSLA DLE+ KAV +L+ +D QA+D LK ++ S +A
Sbjct: 390 YFNDGYSWCVETIKNSYFSSLATDLELKKAVIYLKQDDFQQAIDTLKYFEKKESNIAINA 449
Query: 389 ATNLSFIYFL 398
A NLSFIY L
Sbjct: 450 AINLSFIYIL 459
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARN--QDFKAALEKAKLASNKERVLIKLQEQFGHAD 59
E PE++++ +E +I L++ES + + D +L KAK AS+ +R L+++++Q G
Sbjct: 104 ETPEQRYKNLETKIYALLEESIVASTGGKPDMATSLAKAKEASSLDRTLLRMRDQDGGTY 163
Query: 60 SHNIELTF 67
+HN +LTF
Sbjct: 164 THNFDLTF 171
>gi|145530556|ref|XP_001451054.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418690|emb|CAK83657.1| unnamed protein product [Paramecium tetraurelia]
Length = 566
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 138/210 (65%), Gaps = 5/210 (2%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
D L + +E + EA I TSAKLIAP IED+ GY W ++ ++NS ++EI K
Sbjct: 320 DKLREDTKERRREAIYYIATSAKLIAPLIEDDIIIGYEWILEQLKNSTFPEAETEIEICK 379
Query: 142 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
A+ +L+ ++ ++++ LK + ++ + ATN+SF+YFL+ + +QAEK AE A T D
Sbjct: 380 AMAYLKKKNIEKSIETLKGFEKKDKQIMARIATNISFLYFLENDYKQAEKYAEIAITYDR 439
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
YN+ A VN GNC + ++++ KE Y+ A+ +A CIEALYNL ++ LN + +SL+
Sbjct: 440 YNAKALVNRGNCLYVKNEFLRAKEQYLEAIGVEADCIEALYNLAYVNRKLNMFIESLQAL 499
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
KLQ IV +PEVLYQ+A+LYE+TG+ +QA
Sbjct: 500 DKLQTIV-CIPEVLYQMATLYEMTGNSKQA 528
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-NDATCIEALY----NLGLAHKHL--NEYSDSLEC 256
VN+GN ++ Y ++Y ALD AT E + N+G A + ++ +++
Sbjct: 201 VNMGNIYFEQKKYSTAIKMYKMALDLIPATSKEMRFKIQKNIGHAQVRMGKDKIKEAMTT 260
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVR---------------N 301
+ ++ P P + LY +G+ + D LL +
Sbjct: 261 YEQILKNSPDFPTGFNLLICLY-FSGNKNKMKDYFVTLLTIEIPGEGEEENNENKGTTIT 319
Query: 302 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 361
D L + +E + EA I TSAKLIAP IED+ GY W ++ ++NS ++EI K
Sbjct: 320 DKLREDTKERRREAIYYIATSAKLIAPLIEDDIIIGYEWILEQLKNSTFPEAETEIEICK 379
Query: 362 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
A+ +L+ ++ ++++ LK + ++ + ATN+SF+YFL
Sbjct: 380 AMAYLKKKNIEKSIETLKGFEKKDKQIMARIATNISFLYFL 420
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+F+ +E+EI LI++S + + LEKAK A NKE+ L + +E +S N
Sbjct: 98 PEEQFKAIEKEINTLIEQSAMAKLRGNLSECLEKAKEAFNKEKKLRQSKEAQNLVESINP 157
Query: 64 ELTF 67
+L++
Sbjct: 158 DLSY 161
>gi|145538937|ref|XP_001455163.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422962|emb|CAK87766.1| unnamed protein product [Paramecium tetraurelia]
Length = 726
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 140/218 (64%), Gaps = 5/218 (2%)
Query: 74 KNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSL 133
KN D L + ++ + +A I TSAKLIAP IED+ GY W ++ ++NS
Sbjct: 292 KNKGTTITDKLREDTKKRRKKAIYYIATSAKLIAPLIEDDIIIGYEWILEQLKNSTFPEA 351
Query: 134 AQDLEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMA 189
++EI KA+ +L+ ++ ++++ LK + ++ + ATN+SF+YFL+ + +QAEK A
Sbjct: 352 ETEIEICKAMAYLKKKNIEKSIETLKGFEKKDKQIMARIATNISFLYFLENDYKQAEKYA 411
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E A T D YN+ A VN GNC + ++++ KE Y+ A+ +A CIEALYNL ++ LN
Sbjct: 412 EIAITYDRYNAKALVNRGNCLYVKNEFLRAKEQYLEAIGVEADCIEALYNLAYVNRKLNM 471
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ +SL+ KLQ IV +PEVLYQ+A+LYE+TG+ +QA
Sbjct: 472 FIESLQALDKLQTIV-CIPEVLYQMATLYEMTGNSKQA 508
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-NDATCIEALY----NLGLAHKHL--NEYSDSLEC 256
VN+GN ++ Y ++Y ALD AT E + N+G A + ++ +++
Sbjct: 191 VNMGNIYFEQKKYSTAIKMYKMALDLIPATSKEMRFKIQKNIGHAQVRMGKDKIKEAMTT 250
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN------DALSQLHRE 310
+ ++ P P + L + + Q S E + ++N D L + ++
Sbjct: 251 YEQILKNSPDFPTGFNLLICLTTLL--LSQPSKYQERVKKRIMKNKGTTITDKLREDTKK 308
Query: 311 MKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMND 370
+ +A I TSAKLIAP IED+ GY W ++ ++NS ++EI KA+ +L+ +
Sbjct: 309 RRKKAIYYIATSAKLIAPLIEDDIIIGYEWILEQLKNSTFPEAETEIEICKAMAYLKKKN 368
Query: 371 VSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
+ ++++ LK + ++ + ATN+SF+YFL
Sbjct: 369 IEKSIETLKGFEKKDKQIMARIATNISFLYFL 400
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+F+ +E+EI LI++S + + LEKAK A NKE+ L + +E +S N
Sbjct: 88 PEEQFKAIEKEINTLIEQSAMAKLRGNLSECLEKAKEAFNKEKKLRQSKEAQNLVESINP 147
Query: 64 ELTF 67
+L++
Sbjct: 148 DLSY 151
>gi|340507411|gb|EGR33380.1| hypothetical protein IMG5_054890 [Ichthyophthirius multifiliis]
Length = 744
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 141/217 (64%), Gaps = 5/217 (2%)
Query: 75 NARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 134
N +D L + +E K +A ++ SAKLIAP IE++ +GYNW +++++ S +
Sbjct: 430 NQETTYSDMLREEIKEKKRQAIDILVKSAKLIAPVIEEDIIDGYNWIIETLKKSYFPEVE 489
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAE 190
++EI+KA+ FL+ ++ ++++ LKS + M ATN+SF+YFL+ +++ AEK A+
Sbjct: 490 AEVEISKAMAFLKSKNMEKSIETLKSFERKDKIMMGRVATNISFLYFLENDLKNAEKYAD 549
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
A D +N A VN GNC A+ ++++ KE ++ A+ +A CIEALYNL +K LN +
Sbjct: 550 IAINFDRFNPKALVNRGNCMFAKNEFLRAKEQFLEAIGVEADCIEALYNLAFVNKKLNMF 609
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+++L+ KLQ I+ S PEV+YQ+ S++E+ G+ +QA
Sbjct: 610 AEALQALEKLQTII-STPEVVYQMGSIHELMGNTKQA 645
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 174/403 (43%), Gaps = 90/403 (22%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
E F+ MEQEI LI++S + ALEKAK A NKE+ L + +E DS N++
Sbjct: 216 ENNFKNMEQEINDLIEKSAQSNLKGNLNEALEKAKEAFNKEKNLKRQKENANQIDSINMD 275
Query: 65 LTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC 121
L+F+ N+ + A + +AL + + +K + + KL N N Y
Sbjct: 276 LSFTIQFNLANQLQANGIYQEALQKYNDMIK---SRQFPQAGKLRV-----NMGNIY--- 324
Query: 122 VQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-KSCDEMTSSAATNLSFIYFLQG 180
AQ+ + + A+ RM A D++ + +M N+ + G
Sbjct: 325 -----------FAQE-KYSIAIKMYRM-----AHDLIPPTSKQMRFKILQNIGHSFVKLG 367
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
+ E+A E S AF NL C + D V+ K
Sbjct: 368 QFEEAINTYETIMKGYPQFSTAF-NLLLCLYGQGDKVRMK-------------------- 406
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDV-EQASDVNENLLLEAV 299
+CF + +I EI G E+ D+N E
Sbjct: 407 --------------DCFSSMLSI---------------EIQGYTQEEEEDINNQ---ETT 434
Query: 300 RNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEI 359
+D L + +E K +A ++ SAKLIAP IE++ +GYNW +++++ S + ++EI
Sbjct: 435 YSDMLREEIKEKKRQAIDILVKSAKLIAPVIEEDIIDGYNWIIETLKKSYFPEVEAEVEI 494
Query: 360 NKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
+KA+ FL+ ++ ++++ LKS + M ATN+SF+YFL
Sbjct: 495 SKAMAFLKSKNMEKSIETLKSFERKDKIMMGRVATNISFLYFL 537
>gi|313243715|emb|CBY42350.1| unnamed protein product [Oikopleura dioica]
Length = 747
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 148/271 (54%), Gaps = 11/271 (4%)
Query: 24 ICARNQDFKAALE------KAKLASNKERVLIKLQEQFGHADSHNIELTFSNINRKKNAR 77
I + + DFK K A R I+L D ++T + N +
Sbjct: 205 IMSEHPDFKPGFNLIMCYYAMKDAEKMRRAFIRLLNITSGVDEEKYQITTDDKNEAAHLE 264
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQD 136
A+ +D+L R+ K AE+ I+ +AK+IAP IED NFS G++WCV ++ S + LA D
Sbjct: 265 AISSDSLRAHERQRKTLAERSIVQAAKMIAPYIEDRNFSAGFDWCVNQVKQSPYGELASD 324
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LEI+KA+T+L+ + A+ +LK+ ++ + S + NLSFIYFLQ + +A A +A
Sbjct: 325 LEIHKALTYLKEHSFEPAIKILKNLEKKDSNVRSQSNNNLSFIYFLQQKNAEASTFASKA 384
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
AD YN A VN GN D+ + Y AL DA C EALYNLG+A K ++ D
Sbjct: 385 LQADKYNPCALVNKGNTVAFDGDWSSSIQYYQEALRVDAECSEALYNLGIACKRVDRKED 444
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
+LE F KL I + P+V++ IA +Y + GD
Sbjct: 445 ALESFIKLHQIQRTNPQVMFMIADVYRLMGD 475
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 169/391 (43%), Gaps = 85/391 (21%)
Query: 18 LIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIELTFSNINRKKNAR 77
++D+S IC D + ALE AK A+ KER + K ++ G D N++LT
Sbjct: 55 MVDQSIICQSKGDSRRALEIAKNAARKERDVTKKRDASGLTDGQNMDLT----------- 103
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
FS +N VQ N +S Q
Sbjct: 104 ------------------------------------FSVHFNVAVQYEANDLYSEALQAY 127
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEK---MAEEACT 194
++ + N + Q V ++ N+ I+F E ++ K MA +
Sbjct: 128 QV------IVKNKIFQNVGRIR----------VNMGNIHFKLREFSKSVKQYRMALDQVP 171
Query: 195 A--DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+ T S N+G C + Y Y H + ++ + +NL + + + +
Sbjct: 172 SHYRTMRSKIQANIGACFIKLGQYRDAASAYEHIM-SEHPDFKPGFNLIMCYYAMKDAEK 230
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMK 312
F +L I + E YQI + D NE LEA+ +D+L R+ K
Sbjct: 231 MRRAFIRLLNITSGVDEEKYQITT-----------DDKNEAAHLEAISSDSLRAHERQRK 279
Query: 313 HEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDV 371
AE+ I+ +AK+IAP IED NFS G++WCV ++ S + LA DLEI+KA+T+L+ +
Sbjct: 280 TLAERSIVQAAKMIAPYIEDRNFSAGFDWCVNQVKQSPYGELASDLEIHKALTYLKEHSF 339
Query: 372 SQAVDVLKSCDE----MTSSAATNLSFIYFL 398
A+ +LK+ ++ + S + NLSFIYFL
Sbjct: 340 EPAIKILKNLEKKDSNVRSQSNNNLSFIYFL 370
>gi|313225956|emb|CBY21099.1| unnamed protein product [Oikopleura dioica]
Length = 803
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 148/271 (54%), Gaps = 11/271 (4%)
Query: 24 ICARNQDFKAALE------KAKLASNKERVLIKLQEQFGHADSHNIELTFSNINRKKNAR 77
I + + DFK K A R I+L D ++T + N +
Sbjct: 261 IMSEHPDFKPGFNLIMCYYAMKDAEKMRRAFIRLLNITSGVDEEKYQITTDDKNEAAHLE 320
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQD 136
A+ +D+L R+ K AE+ I+ +AK+IAP IED NFS G++WCV ++ S + LA D
Sbjct: 321 AISSDSLRAHERQRKTLAERSIVQAAKMIAPYIEDRNFSAGFDWCVNQVKQSPYGELASD 380
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LEI+KA+T+L+ + A+ +LK+ ++ + S + NLSFIYFLQ + +A A +A
Sbjct: 381 LEIHKALTYLKEHSFEPAIKILKNLEKKDSNVRSQSNNNLSFIYFLQQKNAEASTFASKA 440
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
AD YN A VN GN D+ + Y AL DA C EALYNLG+A K ++ D
Sbjct: 441 LQADKYNPCALVNKGNTVAFDGDWSSSIQYYQEALRVDAECSEALYNLGIACKRVDRKED 500
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
+LE F KL I + P+V++ IA +Y + GD
Sbjct: 501 ALESFIKLHQIQRTNPQVMFMIADVYRLMGD 531
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 169/391 (43%), Gaps = 85/391 (21%)
Query: 18 LIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIELTFSNINRKKNAR 77
++D+S IC D + ALE AK A+ KER + K ++ G D N++LT
Sbjct: 111 MVDQSIICQSKGDSRRALEIAKNAARKERDVTKKRDASGLTDGQNMDLT----------- 159
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
FS +N VQ N +S Q
Sbjct: 160 ------------------------------------FSVHFNVAVQYEANDLYSEALQAY 183
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEK---MAEEACT 194
++ + N + Q V ++ N+ I+F E ++ K MA +
Sbjct: 184 QV------IVKNKIFQNVGRIR----------VNMGNIHFKLREFSKSVKQYRMALDQVP 227
Query: 195 A--DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+ T S N+G C + Y Y H + ++ + +NL + + + +
Sbjct: 228 SHYRTMRSKIQANIGACFIKLGQYRDAASAYEHIM-SEHPDFKPGFNLIMCYYAMKDAEK 286
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMK 312
F +L I + E YQI + D NE LEA+ +D+L R+ K
Sbjct: 287 MRRAFIRLLNITSGVDEEKYQITT-----------DDKNEAAHLEAISSDSLRAHERQRK 335
Query: 313 HEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDV 371
AE+ I+ +AK+IAP IED NFS G++WCV ++ S + LA DLEI+KA+T+L+ +
Sbjct: 336 TLAERSIVQAAKMIAPYIEDRNFSAGFDWCVNQVKQSPYGELASDLEIHKALTYLKEHSF 395
Query: 372 SQAVDVLKSCDE----MTSSAATNLSFIYFL 398
A+ +LK+ ++ + S + NLSFIYFL
Sbjct: 396 EPAIKILKNLEKKDSNVRSQSNNNLSFIYFL 426
>gi|391331847|ref|XP_003740353.1| PREDICTED: intraflagellar transport protein 88 homolog [Metaseiulus
occidentalis]
Length = 751
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 143/247 (57%), Gaps = 16/247 (6%)
Query: 45 ERVLIKLQEQFGHADSHNIELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAK 104
+R IKL D N+ L S N RND L ++ ++ K ++E I+T+A
Sbjct: 312 KRAFIKL------LDVDNVSLESSEQNGPP-----RNDLLHKMEQKRKRDSEFIIMTAAN 360
Query: 105 LIAPSIEDNFSNGYNWCVQSIRNSAH-SSLAQDLEINKAVTFLRMNDVSQAVDVLKSC-- 161
LI P I + Y+WC++ I+ S++ + LA DLE+NKA FLR + +A++ LKS
Sbjct: 361 LITPVIFPTAAESYDWCIEQIKASSNFAYLASDLELNKATAFLRKREFGKAIETLKSFEK 420
Query: 162 -DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
D SAA NLSF+YF+ + QAEK A+ A D Y +AA VN GNC AR D+++ K
Sbjct: 421 RDNKNVSAANNLSFLYFML-DRRQAEKYADAAIAVDKYYAAALVNKGNCCFARGDFLQAK 479
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
E Y AL +A+C+EALYN+ LA + L E +L+ K QAIV P+ LY+I YE
Sbjct: 480 EYYNEALQVEASCVEALYNIALACEKLRERDLALDYLFKFQAIVGLYPKALYKIGQQYEA 539
Query: 281 TGDVEQA 287
GD+ Q+
Sbjct: 540 AGDINQS 546
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 24/218 (11%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
+N+GN +E++ K + Y ALD I+ L N+G A + +++D++ F
Sbjct: 224 LNMGNICFMQENFPKAVKYYRMALDQVPNMQKDLRIKILKNIGTAFVKMGQFADAITSFE 283
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS-------DVNENLLLEA------VRNDALS 305
+ A + L+ I Y + GDV++ DV+ N+ LE+ RND L
Sbjct: 284 YIMAEKSDIQAALHLILCHYAL-GDVDKMKRAFIKLLDVD-NVSLESSEQNGPPRNDLLH 341
Query: 306 QLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAH-SSLAQDLEINKAVT 364
++ ++ K ++E I+T+A LI P I + Y+WC++ I+ S++ + LA DLE+NKA
Sbjct: 342 KMEQKRKRDSEFIIMTAANLITPVIFPTAAESYDWCIEQIKASSNFAYLASDLELNKATA 401
Query: 365 FLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLV 399
FLR + +A++ LKS D SAA NLSF+YF++
Sbjct: 402 FLRKREFGKAIETLKSFEKRDNKNVSAANNLSFLYFML 439
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
P+EK + ME I L++ES A ++FK ALEKAK A ++R L K ++Q N+
Sbjct: 121 PKEKIKSMEARINSLVEESIRDASKKNFKLALEKAKEAVARDRQLSKQRDQILPGGQANM 180
Query: 64 ELTF 67
EL+F
Sbjct: 181 ELSF 184
>gi|302814181|ref|XP_002988775.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii]
gi|300143596|gb|EFJ10286.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii]
Length = 668
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 142/226 (62%), Gaps = 5/226 (2%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
D L Q +++A + ILTSA++IAP + ++ GY+W ++ +++ + +LA ++E++K
Sbjct: 265 DELRQELHARQNQANRLILTSARIIAPVVGNSLVEGYDWVIELLQDQQYVTLAHEMEMDK 324
Query: 142 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
A+ L D QA+ +LK + ++ + AATNLSF+YFL+G++ AEK AE A +
Sbjct: 325 ALQHLHQRDFQQAIALLKEFERKERDLQARAATNLSFLYFLEGDLANAEKHAELAVLNNR 384
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+N+ A VN GNC R D + K++Y A D D C+EALYNLGLA+K LN + ++L F
Sbjct: 385 FNACALVNQGNCYFMRGDPERAKQVYKGAADVDPDCVEALYNLGLAYKKLNSFEEALSVF 444
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA 303
K+ ++P+ EVL+QI + ++ G+ QA E LL+ V +DA
Sbjct: 445 KKISYVLPNNTEVLFQIGQVSDVMGNSRQAIKWLE-LLVSKVMHDA 489
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 32/226 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDA-----TCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN +E Y ++Y ALD T + + N+G++ Y D+++ F
Sbjct: 141 VNMGNIYYEQEKYALAVKMYRMALDQTPNSYKDTRYKIMRNIGISLMRTGHYQDAVQSFE 200
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL----EAVRND------------ 302
L I + S Y + G+ + +LL + R+D
Sbjct: 201 SLIDITVDHHAAYNLLVSHY-VLGNCSKMRSCFTKMLLVKHYDPERDDDIEPDHTAVFRV 259
Query: 303 ---ALSQLHREM---KHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 356
L +L +E+ +++A + ILTSA++IAP + ++ GY+W ++ +++ + +LA +
Sbjct: 260 GPFPLDELRQELHARQNQANRLILTSARIIAPVVGNSLVEGYDWVIELLQDQQYVTLAHE 319
Query: 357 LEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
+E++KA+ L D QA+ +LK + ++ + AATNLSF+YFL
Sbjct: 320 MEMDKALQHLHQRDFQQAIALLKEFERKERDLQARAATNLSFLYFL 365
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PE + +E ++ +++ES + + ALEKAK A +ER+L K +EQ G AD N
Sbjct: 38 PEYQVRELESQVNQMLEESATASFLGQYATALEKAKEAGKRERMLCKHREQTGLADQVNT 97
Query: 64 ELTFS 68
ELTF+
Sbjct: 98 ELTFA 102
>gi|302809168|ref|XP_002986277.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii]
gi|300145813|gb|EFJ12486.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii]
Length = 668
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 142/226 (62%), Gaps = 5/226 (2%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
D L Q +++A + ILTSA++IAP + ++ GY+W ++ +++ + +LA ++E++K
Sbjct: 265 DELRQELHARQNQANRLILTSARIIAPVVGNSLVEGYDWVIELLQDQQYVTLAHEMEMDK 324
Query: 142 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
A+ L D QA+ +LK + ++ + AATNLSF+YFL+G++ AEK AE A +
Sbjct: 325 ALQHLHQRDFQQAIALLKEFERKERDLQARAATNLSFLYFLEGDLANAEKHAELAVLNNR 384
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+N+ A VN GNC R D + K++Y A D D C+EALYNLGLA+K LN + ++L F
Sbjct: 385 FNACALVNQGNCYFMRGDPERAKQVYKGAADVDPDCVEALYNLGLAYKKLNSFEEALSVF 444
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA 303
K+ ++P+ EVL+QI + ++ G+ QA E LL+ V +DA
Sbjct: 445 KKISYVLPNNTEVLFQIGQVSDVMGNSRQAIKWLE-LLVSKVMHDA 489
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 32/226 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDA-----TCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN +E Y ++Y ALD T + + N+G++ Y D+++ F
Sbjct: 141 VNMGNIYYEQEKYALAVKMYRMALDQTPNSYKDTRYKIMRNIGISLMRTGHYQDAVQSFE 200
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL----EAVRND------------ 302
L I + S Y + G+ + +LL + R+D
Sbjct: 201 SLIDITVDHHAAYNLLVSHY-VLGNCSKMRSCFTKMLLVKHYDPERDDDIEPDHTAVFRV 259
Query: 303 ---ALSQLHREM---KHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 356
L +L +E+ +++A + ILTSA++IAP + ++ GY+W ++ +++ + +LA +
Sbjct: 260 GPFPLDELRQELHARQNQANRLILTSARIIAPVVGNSLVEGYDWVIELLQDQQYVTLAHE 319
Query: 357 LEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
+E++KA+ L D QA+ +LK + ++ + AATNLSF+YFL
Sbjct: 320 MEMDKALQHLHQRDFQQAIALLKEFERKERDLQARAATNLSFLYFL 365
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PE + +E ++ +++ES + + ALEKAK A +ER L K +EQ G AD N
Sbjct: 38 PEYQVRELESQVNQMLEESATASFLGQYATALEKAKEAGKRERKLCKHREQTGLADQVNT 97
Query: 64 ELTFS 68
ELTF+
Sbjct: 98 ELTFA 102
>gi|312383966|gb|EFR28827.1| hypothetical protein AND_02731 [Anopheles darlingi]
Length = 809
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 138/218 (63%), Gaps = 12/218 (5%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+++D L R+++ AEK IL SA LI+ I+D F++GY+WCV++I+NS S+LA DLE
Sbjct: 335 IKSDELHNYERKLRQLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSTLATDLE 394
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFLQGEVEQAEKMAEEACT 194
+ KAV +L+ +D QA+D LK ++ S +AA NLSFIY L+ +V AE AE A
Sbjct: 395 LKKAVIYLKQDDFQQAIDTLKYFEKKESNIAINAAINLSFIYILKKDVAAAETYAEAAKK 454
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D+Y AAF+N G C M + DY K ++ ALD D+T EALYN+GL L +++ +L
Sbjct: 455 IDSYCPAAFINSGVCFMMKNDYESAKLMFTSALDIDSTSFEALYNIGLIFTKLADHNSAL 514
Query: 255 ECFHKLQAIVPSM-----PEVLYQIASLYEITGDVEQA 287
F K I+ S+ PEVLYQIA Y++ GDV A
Sbjct: 515 LYFRK---IISSLGHEQHPEVLYQIAHQYDLLGDVSTA 549
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 118/228 (51%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEAL-----YNLGLAHKHLNEYSDSLECFH 258
+N+GN Y K ++Y ALD + L +N+G+ + +YSD+ F
Sbjct: 212 INMGNIYFQLGLYTKAIKMYRMALDQVPGNQKELRLKITHNIGILFIRMGQYSDAATSFE 271
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS-----------DVNE-------------NL 294
+ + + L+ I Y + GDVE+ D NE +
Sbjct: 272 FIMSEKGDLKTGLHLILCYYAL-GDVEKIKHAFQLLLDIQIDYNEEEKLFQANSNPSHDY 330
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+ E +++D L R+++ AEK IL SA LI+ I+D F++GY+WCV++I+NS S+LA
Sbjct: 331 INELIKSDELHNYERKLRQLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSTLA 390
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFL 398
DLE+ KAV +L+ +D QA+D LK ++ S +AA NLSFIY L
Sbjct: 391 TDLELKKAVIYLKQDDFQQAIDTLKYFEKKESNIAINAAINLSFIYIL 438
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQ--DFKAALEKAKLASNKERVLIKLQEQFGHAD 59
E PE++++ +E +I L++ES + + D + L KAK AS+ +R L+++++Q G
Sbjct: 105 ETPEQRYKNLETKIYALLEESIVASTGPKPDMASGLAKAKEASSLDRTLLRMRDQDGGTY 164
Query: 60 SHNIELTF 67
+HN +LTF
Sbjct: 165 THNFDLTF 172
>gi|146184776|ref|XP_001030101.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|146142898|gb|EAR82438.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 739
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 137/211 (64%), Gaps = 5/211 (2%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEIN 140
ND L + +E K A ++ SAKLIAP IE++ +GY+W +++++ S + ++EI
Sbjct: 309 NDPLREEIKEKKRIAIDILVKSAKLIAPVIEEDIIDGYDWIIETLKESYFPEVQAEVEIC 368
Query: 141 KAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
KA+ +L+ ++ ++++ LKS + M ATN+SF+YFL+ + + AEK A+ A D
Sbjct: 369 KAMAYLKSKNMDKSIETLKSFERKDKIMMGRVATNISFLYFLENDFKNAEKYADVAINYD 428
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+N A VN GNC + + ++++ KE Y+ A+ +A CIEALYNL +K LN ++++L+
Sbjct: 429 RFNPKALVNRGNCLLVKNEFLRSKEQYLEAIGVEADCIEALYNLAFVNKKLNMFNEALQA 488
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
KLQ I+ S PEV+YQ+AS++E+ G +QA
Sbjct: 489 LEKLQTII-STPEVVYQMASIHELMGQTKQA 518
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN +E Y ++Y D + + L N+G A+ ++ D++ +
Sbjct: 192 VNMGNIYFQQEKYSAAIKMYKMVYDWLPPTSKEMRFQVLKNIGHAYVKEGKFDDAINTYE 251
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL----------------LEAVRND 302
+ P + LY+ GD + D ++L E+ ND
Sbjct: 252 TIMKGNPDFQTAFNLLLCLYD-QGDKLRMKDCFSSMLGIEIPGYTENEEEEMNQESAFND 310
Query: 303 ALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKA 362
L + +E K A ++ SAKLIAP IE++ +GY+W +++++ S + ++EI KA
Sbjct: 311 PLREEIKEKKRIAIDILVKSAKLIAPVIEEDIIDGYDWIIETLKESYFPEVQAEVEICKA 370
Query: 363 VTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
+ +L+ ++ ++++ LKS + M ATN+SF+YFL
Sbjct: 371 MAYLKSKNMDKSIETLKSFERKDKIMMGRVATNISFLYFL 410
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PE F++ E+EI L++ S + + ALEKAK A NKE++L + +E ADS NI
Sbjct: 89 PESNFKQQEKEINQLLEASALAKIKGNLSEALEKAKDAVNKEKLLRRQKENMNQADSINI 148
Query: 64 ELTFS---NINRKKNARAVRNDALSQ 86
EL+F+ N+ + A + +AL +
Sbjct: 149 ELSFTVAYNLANQLQANGIYQEALQK 174
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 15/195 (7%)
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQG 180
C++++ N A +NK + N+ QA++ L++ T ++ I+ L G
Sbjct: 465 CIEALYNLAF--------VNKKLNMF--NEALQALEKLQTIIS-TPEVVYQMASIHELMG 513
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
+ +QA K + T + +GN +D + Y + T IE + L
Sbjct: 514 QTKQALKWYQVLLTKVPTDPNILARVGNIFAREDDETQALHYYSESYKYLPTNIETIGWL 573
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVR 300
G+ + Y + F + I P + +AS Y G ++A + E + + R
Sbjct: 574 GIYYVKQEYYERACHFFERASQIQPKEIKWRLMVASCYRRMGSYQKALKIYEEIYQDEPR 633
Query: 301 N----DALSQLHREM 311
N L+QL +EM
Sbjct: 634 NVECLKFLTQLCKEM 648
>gi|223993341|ref|XP_002286354.1| intraflagellar transport protein [Thalassiosira pseudonana
CCMP1335]
gi|220977669|gb|EED95995.1| intraflagellar transport protein [Thalassiosira pseudonana
CCMP1335]
Length = 549
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 133/219 (60%), Gaps = 5/219 (2%)
Query: 75 NARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIE-DNFSNGYNWCVQSIRNSAHSSL 133
N ++ ND+L Q E+ + LTSA++IAPS++ +N+S GY+W +++ H L
Sbjct: 213 NGLSMTNDSLQQELATRSKESSRYFLTSARMIAPSLDSNNWSAGYDWVCNALKERHHEVL 272
Query: 134 AQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMA 189
A LE+ +AV L+ + AV LK+ ++ + + AATNLSF+ FLQG++++A K A
Sbjct: 273 AAQLELEQAVQRLKHKEFMGAVKTLKNLEKKGTAVKAKAATNLSFVKFLQGDIDRASKYA 332
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
+ A AD YN+ A VN GNC E+Y KELY+ A+ C +A++NLGL + L
Sbjct: 333 DAALEADRYNADALVNKGNCFYVTEEYALAKELYLEAIGVQTDCAQAIFNLGLCNVQLEL 392
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
Y +S+E F L I P+ P V+YQ+A +Y++ G + ++
Sbjct: 393 YEESIEAFENLHKITPNNPAVIYQVADIYDLRGQTDDST 431
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 50/278 (17%)
Query: 163 EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY----------NSAAFVNLGNCAMA 212
EM ++ AT +F +A M +EA TA TY S +N+GN A
Sbjct: 52 EMETTYAT-----WFNLASAYEANGMLDEALTAYTYLTKQRGQHLLTSRVRINMGNVYYA 106
Query: 213 REDYVKGKELYVHALD----NDATCIEALY-NLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ D+ +++ ALD ++++ ++ N+G + L D+++ + + P
Sbjct: 107 QSDFPSAIKMFKMALDQIRKDESSLTHKIFRNIGNSFFRLGSIRDAVKNYESVMDGAPDF 166
Query: 268 PEVLYQIASLYEITGDVE-------------QASD---------VNENLLLEAVRNDALS 305
+ + + + + GDVE Q SD + N L ++ ND+L
Sbjct: 167 -QTGFNLLICHLVLGDVESIKSDFIRLVEIPQNSDGPLSDDYEFIAPNGL--SMTNDSLQ 223
Query: 306 QLHREMKHEAEKCILTSAKLIAPSIE-DNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVT 364
Q E+ + LTSA++IAPS++ +N+S GY+W +++ H LA LE+ +AV
Sbjct: 224 QELATRSKESSRYFLTSARMIAPSLDSNNWSAGYDWVCNALKERHHEVLAAQLELEQAVQ 283
Query: 365 FLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
L+ + AV LK+ ++ + + AATNLSF+ FL
Sbjct: 284 RLKHKEFMGAVKTLKNLEKKGTAVKAKAATNLSFVKFL 321
>gi|394987155|gb|AFN42835.1| intraflagellar transport protein 88-like protein [Marsilea vestita]
Length = 486
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 133/213 (62%), Gaps = 4/213 (1%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
++ND L + +A K I +A++IAP+I NF++GY+W + +++ + +LA +LE
Sbjct: 55 MKNDRLRTELLSRQTQAHKYIFNAARIIAPAICSNFADGYDWIINVLKDQQYVNLAHELE 114
Query: 139 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
++KAV +L + +QA +LK+ + ++ + AATNLSF+YFL+G+V+ A + AE A +
Sbjct: 115 MDKAVQYLHRKNFAQATCILKTFEKKERDLKTCAATNLSFLYFLEGKVDNAREYAELALS 174
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
A+ N +A VNLGNC + D LY ALD D C++A YNLGL K LN + ++L
Sbjct: 175 ANNQNPSAIVNLGNCLFLKGDVEVSGSLYQRALDLDGKCLQASYNLGLVQKKLNFFPEAL 234
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
F L +P+ EVLYQI L ++ G+ +QA
Sbjct: 235 AIFRDLSKKLPNNVEVLYQIGHLSDLMGNTQQA 267
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 299 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 358
++ND L + +A K I +A++IAP+I NF++GY+W + +++ + +LA +LE
Sbjct: 55 MKNDRLRTELLSRQTQAHKYIFNAARIIAPAICSNFADGYDWIINVLKDQQYVNLAHELE 114
Query: 359 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
++KAV +L + +QA +LK+ + ++ + AATNLSF+YFL
Sbjct: 115 MDKAVQYLHRKNFAQATCILKTFEKKERDLKTCAATNLSFLYFL 158
>gi|325179518|emb|CCA13915.1| Intraflagellar Transport Protein 88 putative [Albugo laibachii
Nc14]
Length = 853
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 135/215 (62%), Gaps = 5/215 (2%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQDL 137
+ D L R + +A IL ++KL AP+++ ++ GYNW + +++ H SLA ++
Sbjct: 369 AKADGLKAEIRSRRKKATDYILVASKLCAPALDKKDWLAGYNWIIDALKQENHESLASEM 428
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEM----TSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI KA FLR D +A++VLK+ ++ + AATNLSF+YF++G+ QA+K A A
Sbjct: 429 EICKAHFFLREKDFDKAIEVLKAFEKKDAVHKAMAATNLSFLYFIEGDWSQADKYATMAV 488
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
YN+ A VN NC + D + KELY+ A+ +A CIEA+YNLGL + + +++
Sbjct: 489 RHQRYNAKALVNKANCLCVKNDCERAKELYLEAIGVEADCIEAIYNLGLVNIKMGVLNEA 548
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
L+ F KL +I+PS EVLYQIA+++++ GD QA+
Sbjct: 549 LQAFEKLHSILPSNTEVLYQIANIHDMIGDYRQAA 583
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 47/242 (19%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDN-DATCIEALY----NLGLAHKHLNEYSDSLECFH 258
VN+GN + Y +Y ALD T E Y N+G A L Y D+ F
Sbjct: 232 VNMGNIYFEEQQYPTAIRMYRMALDQIPGTSKEIRYRIKRNIGAAQIKLGHYQDAASTFE 291
Query: 259 KL-------QA---------IVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEA---- 298
+ QA + ++ +SL I D A + E+ +
Sbjct: 292 DIMESNADFQAGFNLIVCYYAIGEHDKMRRGFSSLISIPMDTMSAEEEEEDQEQKTQLLL 351
Query: 299 -----------------VRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNW 340
+ D L R + +A IL ++KL AP+++ ++ GYNW
Sbjct: 352 NSLSSESLTKASSGGALAKADGLKAEIRSRRKKATDYILVASKLCAPALDKKDWLAGYNW 411
Query: 341 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEM----TSSAATNLSFIY 396
+ +++ H SLA ++EI KA FLR D +A++VLK+ ++ + AATNLSF+Y
Sbjct: 412 IIDALKQENHESLASEMEICKAHFFLREKDFDKAIEVLKAFEKKDAVHKAMAATNLSFLY 471
Query: 397 FL 398
F+
Sbjct: 472 FI 473
>gi|168040218|ref|XP_001772592.1| intraflagellar transport protein IFT88 [Physcomitrella patens
subsp. patens]
gi|162676147|gb|EDQ62634.1| intraflagellar transport protein IFT88 [Physcomitrella patens
subsp. patens]
Length = 666
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 128/203 (63%), Gaps = 4/203 (1%)
Query: 89 REMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRM 148
R +++A K I T+A+LIAP + NF GY+W V+ +++ +++LA ++E+ KA+ L
Sbjct: 294 RTKQNQALKYISTAARLIAPVLYHNFVEGYDWVVEGLKDQQYAALANEMELEKAIQHLHR 353
Query: 149 NDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFV 204
D +QA+ +LK + ++ + AATNLSF+YFL+G++ AEK AE A + YN+ A V
Sbjct: 354 RDFTQAIVLLKDFEKKEKDLKARAATNLSFLYFLEGDISNAEKHAEVAVKTNRYNAQALV 413
Query: 205 NLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
N GNC +R + K +Y A + + C+EA+YNLGL HK L D+L F KL +
Sbjct: 414 NQGNCLYSRGRVEEAKAVYQEAAEVELDCVEAVYNLGLCHKRLGALGDALSTFKKLSNSI 473
Query: 265 PSMPEVLYQIASLYEITGDVEQA 287
P+ EVL+Q+ + + G+++QA
Sbjct: 474 PNSIEVLFQVGDVNGLMGNIKQA 496
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN ++++ ++Y ALD T L N+G A L +Y D+++ F
Sbjct: 165 VNMGNIYYKQKNFPLAVKMYRMALDLTPSAYKETRYSILRNIGNALMRLGKYQDAVQAF- 223
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL----------------EAVRND 302
+L + Y + Y + + EQ + +LL +R
Sbjct: 224 ELVMENKVDHQTTYNLIVCYYVLENTEQMKNCFTKMLLVKYYDSDSDDENDDENSVLRVY 283
Query: 303 ALSQLHRE----MKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 358
L RE +++A K I T+A+LIAP + NF GY+W V+ +++ +++LA ++E
Sbjct: 284 PSPVLLREELRTKQNQALKYISTAARLIAPVLYHNFVEGYDWVVEGLKDQQYAALANEME 343
Query: 359 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
+ KA+ L D +QA+ +LK + ++ + AATNLSF+YFL
Sbjct: 344 LEKAIQHLHRRDFTQAIVLLKDFEKKEKDLKARAATNLSFLYFL 387
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PE + +E+ + L++ S DF+ AL+KAK A K+R L + +EQ G AD N+
Sbjct: 62 PEYQCREIERAVNQLLEASAAAGLAGDFQTALQKAKEAGKKDRALCRTREQAGLADQMNM 121
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHE 94
ELTF+ N+ + ++++AL+ + MK++
Sbjct: 122 ELTFAVCFNLGYQYQCGGLQSEALNTYTQIMKNK 155
>gi|393908629|gb|EJD75140.1| OSM-5 protein [Loa loa]
Length = 704
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 136/218 (62%), Gaps = 6/218 (2%)
Query: 76 ARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 135
++ + ND+L Q R+ ++ AEK I + K+I+ +I S+GY WCV++IR S ++ LA
Sbjct: 231 SQMISNDSLKQWERQRRNVAEKTIFIATKIISSAIASTVSDGYKWCVEAIRQSVYAPLAM 290
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC----DEMTSSAATNLSFIYFLQG--EVEQAEKMA 189
++E++K V L+ D++ A VL S D++ S+AA +L+ I LQG ++E+A + +
Sbjct: 291 EIEMSKVVVLLKQGDITNATKVLMSFNNKEDKVASAAANSLAVINLLQGGPKLEEAIQYS 350
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E+A +AD YN+ A VN GN D K + Y AL N+A+C++ALYNLG + +
Sbjct: 351 EQALSADRYNANALVNRGNIFFVLGDLEKAAQYYKEALSNEASCLQALYNLGYVQRLQGK 410
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+LECF+KL I+ + +VL Q+AS+YE+ D QA
Sbjct: 411 LEAALECFYKLHNILLNNVQVLCQLASIYELLEDTAQA 448
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 205 NLGNCAMAREDYVKGKELYVHALDN-----DATCIEALYNLGLAHKHLNEYSDSLECFHK 259
N+ N ++DY K +LY ALD T I+ + N+G+A EY ++ F
Sbjct: 116 NIANIYFKQKDYKKAIKLYQIALDQIPNSQKNTRIKIMNNIGVAFIKCGEYDEADSTFEH 175
Query: 260 ---------------LQAI----VPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVR 300
L A + M + ++ + + D + D ++ L+ + +
Sbjct: 176 CMNEKGNYNTALNFILTAYCLNDIDKMKDGFQRLLDIPLLIDDETKYMDQHDYLISQMIS 235
Query: 301 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEIN 360
ND+L Q R+ ++ AEK I + K+I+ +I S+GY WCV++IR S ++ LA ++E++
Sbjct: 236 NDSLKQWERQRRNVAEKTIFIATKIISSAIASTVSDGYKWCVEAIRQSVYAPLAMEIEMS 295
Query: 361 KAVTFLRMNDVSQAVDVLKSC----DEMTSSAATNLSFIYFL 398
K V L+ D++ A VL S D++ S+AA +L+ I L
Sbjct: 296 KVVVLLKQGDITNATKVLMSFNNKEDKVASAAANSLAVINLL 337
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 15/182 (8%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK +MEQ++ L+ ES D K ALEKAK A +ER ++K++EQ + N++
Sbjct: 13 EEKCRQMEQKVNELLKESIFAWEKGDMKQALEKAKEAGRRERTIVKMREQLSIVEQLNLD 72
Query: 65 LTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNG---- 117
LTF+ N+ + A + +AL+ +K+ K S +L A F
Sbjct: 73 LTFTVLFNLAHQYMANNLLTEALNTYQMIVKN---KMFANSGRLKANIANIYFKQKDYKK 129
Query: 118 ----YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLS 173
Y + I NS ++ + + N V F++ + +A + C + T L+
Sbjct: 130 AIKLYQIALDQIPNSQKNTRIKIMN-NIGVAFIKCGEYDEADSTFEHCMNEKGNYNTALN 188
Query: 174 FI 175
FI
Sbjct: 189 FI 190
>gi|350589688|ref|XP_003130917.3| PREDICTED: intraflagellar transport protein 88 homolog, partial
[Sus scrofa]
Length = 417
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 155/295 (52%), Gaps = 21/295 (7%)
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIY 176
CV+ ++ S + LA DLEINKAVT+L+ D QA + LK ++ + S+AATNLSF+Y
Sbjct: 2 CVEVVKASPYVELANDLEINKAVTYLKQKDFHQAAETLKMFEKKDSRVKSAAATNLSFLY 61
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
+L+ E QA A+ A +D YN +A N GN A DY K E Y AL ND++C EA
Sbjct: 62 YLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEA 121
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
LYN+GL +K LN ++L+CF KL AI+ + VLYQIA++YE+ D QA + LL
Sbjct: 122 LYNIGLTYKKLNRLDEALDCFLKLHAILRNSAHVLYQIANIYELMEDPGQAVEWLMQ-LL 180
Query: 297 EAVRNDA--LSQLHREMKHEAEKC-----ILTSAKLIAPSIE-----DNFSNGYNWCVQS 344
V D+ LS+L E +K S + SI+ + +C ++
Sbjct: 181 SVVPTDSRVLSKLGGLYDSEGDKSQAFQYYYESYRYFPSSIDVIEWLGAYYVDTQFCEKA 240
Query: 345 IRNSAHSSLAQDLEINK----AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFI 395
I+ +SL Q ++ A F R + +A+D K M A L F+
Sbjct: 241 IQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRMFPENAECLRFL 295
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Query: 341 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIY 396
CV+ ++ S + LA DLEINKAVT+L+ D QA + LK ++ + S+AATNLSF+Y
Sbjct: 2 CVEVVKASPYVELANDLEINKAVTYLKQKDFHQAAETLKMFEKKDSRVKSAAATNLSFLY 61
Query: 397 FL 398
+L
Sbjct: 62 YL 63
>gi|298708566|emb|CBJ30651.1| Intraflagellar transport particle protein [Ectocarpus siliculosus]
Length = 703
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 145/233 (62%), Gaps = 9/233 (3%)
Query: 76 ARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLA 134
+A + ++L R K EAE + T+AKLIAP ++ ++ +GY+W V++I+ H LA
Sbjct: 258 GQAAPDKLRAELQRR-KKEAEHYVFTAAKLIAPVMDKKDWESGYDWVVETIKLD-HEYLA 315
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAE 190
+E+ KA+ +L+ + +A++ LK+ ++ + + AATNL+FIYFL+GE + A+ A+
Sbjct: 316 SKMEVEKALHYLKTKEFDKAIEHLKAFEKKDQHLKAMAATNLAFIYFLEGEFKSADSYAD 375
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
A + YN+ A VN GNC ++Y + KE+++ A+ + C+EA+YNLGL + HL
Sbjct: 376 MAIRHNRYNAKALVNKGNCLFMSKEYERAKEIFLEAIGVEVDCVEAIYNLGLVNIHLGLP 435
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEI-TGDVEQASDVNENLLLEAVRND 302
DSL+ F KL I+P+ EV+Y IA+LYE ++ QAS N+LL V D
Sbjct: 436 GDSLQAFEKLHTIIPNNTEVIYHIANLYEAHMENLPQASKWF-NILLARVPTD 487
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 136/281 (48%), Gaps = 44/281 (15%)
Query: 163 EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFV--NLGNCAMAREDYVKGK 220
++T + NL+ Y G ++A + Y A + N+GN + +Y +
Sbjct: 93 DLTYAVCFNLANCYHQNGMKKEALREYGAIVKNKQYPQAGRLRANMGNIYYEQREYPEAI 152
Query: 221 ELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLE-------------------- 255
+ Y ALD + + N+G A + ++ D++
Sbjct: 153 KNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVL 212
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNEN-------LLLEAVRNDALSQLH 308
C++ L+ + SM + ++A++ + G E +D +E+ + +A + ++L
Sbjct: 213 CYYALEDGL-SMKKAFQRLAAI-PVQGTTEDDNDEDESKAADEAEITGQAAPDKLRAELQ 270
Query: 309 REMKHEAEKCILTSAKLIAPSIE-DNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLR 367
R K EAE + T+AKLIAP ++ ++ +GY+W V++I+ H LA +E+ KA+ +L+
Sbjct: 271 RR-KKEAEHYVFTAAKLIAPVMDKKDWESGYDWVVETIKLD-HEYLASKMEVEKALHYLK 328
Query: 368 MNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLVSSEFQ 404
+ +A++ LK+ ++ + + AATNL+FIYFL EF+
Sbjct: 329 TKEFDKAIEHLKAFEKKDQHLKAMAATNLAFIYFL-EGEFK 368
>gi|348681758|gb|EGZ21574.1| hypothetical protein PHYSODRAFT_495507 [Phytophthora sojae]
Length = 876
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 142/221 (64%), Gaps = 5/221 (2%)
Query: 73 KKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHS 131
K++ +++ D L R + +A + IL +AKL AP+++ ++ G+ W + +++ H
Sbjct: 369 KEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHE 428
Query: 132 SLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFLQGEVEQAEK 187
SLA ++EI KA FL+ + +A++VLK+ ++ + AATNLS++YF++G+ QA+K
Sbjct: 429 SLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADK 488
Query: 188 MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHL 247
A A YN+ A VN GNC + + + KEL++ A+ +A CIEA+YNLGL + +
Sbjct: 489 YASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKM 548
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
+ +++L+ F KL +IVP+ EVLYQIA+L++I G+ QA+
Sbjct: 549 SVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQAA 589
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 47/282 (16%)
Query: 163 EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAF--VNLGNCAMAREDYVKGK 220
++T + NL+ Y L G ++A + Y VN+GN ++ Y
Sbjct: 199 DLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQYAQGGRLRVNMGNIYFEQQQYPTAI 258
Query: 221 ELYVHALDN-DATCIEALY----NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA 275
+Y ALD T E Y N+G A L Y D+ F + I
Sbjct: 259 RMYRMALDQIPNTSKEVRYKIKRNIGAAQIKLGHYQDAAATFEDVMEGNADFQSGFNLII 318
Query: 276 SLYEITGDVEQASDVNENLL----------------------------------LEAVRN 301
Y I G+ E+ NL+ L +++
Sbjct: 319 CYYAI-GEHEKMRRGFTNLITIPMEGMSDEDEEESGLANESKHSDDDHTSSKEHLHSLKT 377
Query: 302 DALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQDLEIN 360
D L R + +A + IL +AKL AP+++ ++ G+ W + +++ H SLA ++EI
Sbjct: 378 DGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEIC 437
Query: 361 KAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFL 398
KA FL+ + +A++VLK+ ++ + AATNLS++YF+
Sbjct: 438 KAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFV 479
>gi|403373486|gb|EJY86662.1| TPR Domain containing protein [Oxytricha trifallax]
Length = 890
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 135/209 (64%), Gaps = 5/209 (2%)
Query: 99 ILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL 158
+ ++AKL+AP IE + GYN+ +++++ + + ++EI+K++ +++ ++ +A++
Sbjct: 473 VSSAAKLVAPMIEQDVIVGYNYVIEALKAANLPEVESEMEISKSIHYIKNKEIEKAIESF 532
Query: 159 KSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMARE 214
K+ ++ M + A+ N+SF+YFL+ + + AE+ ++ A D YNS A VN GNC E
Sbjct: 533 KAFEKKDKIMMAMASNNISFLYFLENDFKNAEQFSDLAIQHDRYNSKALVNKGNCLFISE 592
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
DY + KE ++ A+ +A CIEA+YNLGL +K L Y++SL+ F KL I+P+ EV+YQI
Sbjct: 593 DYDRAKEFFLEAIGVEADCIEAIYNLGLVYKRLGYYNESLQAFEKLHTIIPNSYEVIYQI 652
Query: 275 ASLYEITGDVEQASDVNENLLLEAVRNDA 303
A +YE+ G QA N+L+ V +D+
Sbjct: 653 AHVYELIGMRRQAIKW-YNILITKVPSDS 680
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + + ++Y ALD N ++ N+GLA+ ++ ++E +
Sbjct: 331 VNMGNIYFEQAKFDQAIKMYNMALDSTMQSNKEMKMKIKKNVGLAYVKQKKFGKAIEVYE 390
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN----------------- 301
+ P I LY + G+ ++ E LL+ +
Sbjct: 391 DIMNDTPDFDVGFNLIVCLYAL-GEKDKMRTWFERLLMIDIPGIDEEEQEELLQMQNKLD 449
Query: 302 ------DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 355
D L + +E K EA + ++AKL+AP IE + GYN+ +++++ + +
Sbjct: 450 KPVGEPDPLKEYLKEKKKEALHYVSSAAKLVAPMIEQDVIVGYNYVIEALKAANLPEVES 509
Query: 356 DLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
++EI+K++ +++ ++ +A++ K+ ++ M + A+ N+SF+YFL
Sbjct: 510 EMEISKSIHYIKNKEIEKAIESFKAFEKKDKIMMAMASNNISFLYFL 556
>gi|301107085|ref|XP_002902625.1| Intraflagellar Transport Protein 88 [Phytophthora infestans T30-4]
gi|262098499|gb|EEY56551.1| Intraflagellar Transport Protein 88 [Phytophthora infestans T30-4]
Length = 869
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 165/279 (59%), Gaps = 9/279 (3%)
Query: 73 KKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHS 131
K + +++ D L R + +A + IL +AKL AP+++ ++ G+ W + +++ H
Sbjct: 369 KDHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHE 428
Query: 132 SLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFLQGEVEQAEK 187
SLA ++EI KA FL+ + +A++VLK+ ++ + AATNLS++YF++G+ QA+K
Sbjct: 429 SLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTTQADK 488
Query: 188 MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHL 247
A A YN+ A VN GNC + + + KEL++ A+ +A CIEA+YNLGL + +
Sbjct: 489 YASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKM 548
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQL 307
+++L+ F KL +IVP+ EVLYQIA+L+++ G+ QA+ LL ND +
Sbjct: 549 GVLNEALQAFEKLHSIVPTNAEVLYQIANLHDVMGNYRQAAKWFNILLSCFGSND---KR 605
Query: 308 HREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIR 346
R K+ A+ +L I + +D+ + +++ ++S R
Sbjct: 606 ERNTKNVADPGVLARLGQIF-NKDDDETQAFHYHLESYR 643
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 47/282 (16%)
Query: 163 EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAF--VNLGNCAMAREDYVKGK 220
++T + NL+ Y L G ++A + Y VN+GN ++ +
Sbjct: 199 DLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQYAQGGRLRVNMGNIYFEQQQFPTAI 258
Query: 221 ELYVHALDN-DATCIEALY----NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA 275
+Y ALD T E Y N+G A L Y D+ F + I
Sbjct: 259 RMYRMALDQIPNTSKEVRYKIKRNIGAAQIKLGHYQDAAATFEDIMEGNADFQSGFNLII 318
Query: 276 SLYEITGDVEQASDVNENLL----------------------------------LEAVRN 301
Y I G+ E+ NL+ L +++
Sbjct: 319 CYYAI-GEHEKMRRGFTNLITTPMEGMSEEDEDESGLANESKHDDDAHTSSKDHLHSLKT 377
Query: 302 DALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQDLEIN 360
D L R + +A + IL +AKL AP+++ ++ G+ W + +++ H SLA ++EI
Sbjct: 378 DGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEIC 437
Query: 361 KAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFL 398
KA FL+ + +A++VLK+ ++ + AATNLS++YF+
Sbjct: 438 KAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFV 479
>gi|322785507|gb|EFZ12176.1| hypothetical protein SINV_14518 [Solenopsis invicta]
Length = 771
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 137/226 (60%), Gaps = 32/226 (14%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+RND LS+L +E+K E+EK IL +AKLIAP IED + G+ WCV +I++S HS LA DLE
Sbjct: 371 IRNDDLSKLEKEIKLESEKTILCAAKLIAPVIEDTLTAGFAWCVDAIKSSTHSILAADLE 430
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
INKA M + Q QG+ +QAEK E A AD Y
Sbjct: 431 INKA-----MQKILQ-------------------------QGDYDQAEKYGEIARNADAY 460
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
N+AA+VNL CA+ +++ +EL + AL+ DA+ ++ALYNLGL +K N Y ++LECF
Sbjct: 461 NAAAYVNLSACAIKKDELNIARELLLCALETDASHVQALYNLGLVYKKENMYEEALECFW 520
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASD--VNENLLLEAVRND 302
K++ IV P+ LYQI LY++ D++QAS+ N LL + +D
Sbjct: 521 KIRNIVRHDPQTLYQIGHLYQLMTDIDQASEWYFKYNQLLGIISSD 566
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 185/383 (48%), Gaps = 92/383 (24%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + E++I+GLI+ S A + K ALE+A+ AS++ER LI+LQEQ G +D+HNI
Sbjct: 145 PEEKIKVTERKIMGLIETSTQAASENNIKIALERAREASSRERALIRLQEQAGLSDNHNI 204
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ + N A+ + EM EA IA Q
Sbjct: 205 DLTFA---------VLFNLAVQYTNNEMYTEA----------IA-------------TYQ 232
Query: 124 SI-RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--------NLSF 174
+I RN S+ A+ L++N +++M +SQA+ + + + +A N+
Sbjct: 233 AITRNRMFSNSAR-LKVNMGNIYVKMGQLSQAIKMYRMAFDQAPTAHKDLRIKIMHNMGM 291
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
++ G +E+A NS +V R ++ G +HA+
Sbjct: 292 LFVQMGRLEEAA------------NSFEWV-----MRERAEFKAG----LHAV------- 323
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI--ASLYEITGDVEQASDVNE 292
L + L+H+ K++ + EV I Y I D D
Sbjct: 324 --LCHFALSHR------------DKMKRAFLELLEVQLNIDQEDKYSINPD-----DAAT 364
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSS 352
N+L E +RND LS+L +E+K E+EK IL +AKLIAP IED + G+ WCV +I++S HS
Sbjct: 365 NILNEVIRNDDLSKLEKEIKLESEKTILCAAKLIAPVIEDTLTAGFAWCVDAIKSSTHSI 424
Query: 353 LAQDLEINKAV-TFLRMNDVSQA 374
LA DLEINKA+ L+ D QA
Sbjct: 425 LAADLEINKAMQKILQQGDYDQA 447
>gi|340501668|gb|EGR28423.1| hypothetical protein IMG5_176090 [Ichthyophthirius multifiliis]
Length = 673
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 131/217 (60%), Gaps = 18/217 (8%)
Query: 75 NARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 134
N D L +E K +A + ++ SAKLIAP IE++ +GYNW +++++ S +
Sbjct: 250 NQETAYTDLLRDEIKEKKRQAIEILVKSAKLIAPVIEEDIIDGYNWIIETLKTSNFPEVE 309
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAE 190
++EI+KA+ FL+ ++ ++++ LKS + M ATN+SF+YFL+ + + AEK A+
Sbjct: 310 AEVEISKAMAFLKSKNMEKSIETLKSFERKDKIMMGRVATNISFLYFLERDFKNAEKYAD 369
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
A T D +N A VN GNC + ++++ KE ++ A+ +A CIEALYNL A
Sbjct: 370 IAITFDRFNPKALVNRGNCMFVKNEFLRAKEQFLEAIGVEADCIEALYNLAFA------- 422
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
KLQ I+ S PEV+YQ+AS++E+ G+ +QA
Sbjct: 423 ------LEKLQTII-STPEVVYQMASIHELMGNTKQA 452
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN A+E Y ++Y A D + + L N+G + L ++ +++ +
Sbjct: 138 VNMGNIYFAQEKYSVAIKMYRMAHDLIPPTSKEMRFKILKNIGHSFVKLGQFEEAINTYE 197
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----------------LEAVRN 301
+ P + LY GD + D ++L E
Sbjct: 198 SIMKGSPDFSTSFNLLLCLYG-QGDKIRMKDCFASMLSIEIEGYTEEEEEDINNQETAYT 256
Query: 302 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 361
D L +E K +A + ++ SAKLIAP IE++ +GYNW +++++ S + ++EI+K
Sbjct: 257 DLLRDEIKEKKRQAIEILVKSAKLIAPVIEEDIIDGYNWIIETLKTSNFPEVEAEVEISK 316
Query: 362 AVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
A+ FL+ ++ ++++ LKS + M ATN+SF+YFL
Sbjct: 317 AMAFLKSKNMEKSIETLKSFERKDKIMMGRVATNISFLYFL 357
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE F+ E+EI L+++S + + ALEKAK A NKE+ L + +E + N+
Sbjct: 35 PEENFKAAEKEINALVEKSALANLKGNSSEALEKAKEAYNKEKNLRRQKENANQIEGINM 94
Query: 64 ELTFS---NINRKKNARAVRNDALSQ 86
+L+F+ N+ + A + +AL +
Sbjct: 95 DLSFTVQFNLANQLQANGIYQEALQK 120
>gi|118366265|ref|XP_001016351.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89298118|gb|EAR96106.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 872
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 5/211 (2%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEIN 140
ND L + +E K +A + I+ SAK IAP I DN +GYNW ++++++S ++EI
Sbjct: 271 NDPLREYIKEKKKQAVEIIIRSAKFIAPIILDNIIDGYNWVIEALKDSYFYEAQTEIEIC 330
Query: 141 KAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
K++ +L D+ +++ LK ++ + + N+SF+YFL+ + AE+ A+ A D
Sbjct: 331 KSLAYLETKDIVNSIETLKQFEKRDKIIVGRVSNNISFLYFLEKNFKNAEQYADLAIDFD 390
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+N A VN GNC + ++ + K LY+ AL DA C EALYNL L +K LN +++L
Sbjct: 391 RFNPKALVNRGNCFFVKNEFQRSKLLYLDALRYDAQCAEALYNLALVNKKLNMPNEALLV 450
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
KL I+ S PE++YQ+A++YE+ G QA
Sbjct: 451 LEKLLTII-STPEIIYQVANIYELMGQSNQA 480
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 21/185 (11%)
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD---- 289
++ L N+G+A+ +Y ++++ F + P I L+E+ GD + D
Sbjct: 189 LQILKNIGIANIKQGKYEEAIKDFETIMNEKPDFQTAFNLILCLFEL-GDKQGIKDCFSC 247
Query: 290 --------VNENLLLEAVR----NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNG 337
N+N E ++ ND L + +E K +A + I+ SAK IAP I DN +G
Sbjct: 248 MINIEIPGYNQNEQEEIIQGIALNDPLREYIKEKKKQAVEIIIRSAKFIAPIILDNIIDG 307
Query: 338 YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLS 393
YNW ++++++S ++EI K++ +L D+ +++ LK ++ + + N+S
Sbjct: 308 YNWVIEALKDSYFYEAQTEIEICKSLAYLETKDIVNSIETLKQFEKRDKIIVGRVSNNIS 367
Query: 394 FIYFL 398
F+YFL
Sbjct: 368 FLYFL 372
>gi|170044668|ref|XP_001849961.1| tetratricopeptide repeat protein 10 [Culex quinquefasciatus]
gi|167867726|gb|EDS31109.1| tetratricopeptide repeat protein 10 [Culex quinquefasciatus]
Length = 370
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 121/183 (66%), Gaps = 6/183 (3%)
Query: 119 NWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSF 174
+WCV++I+NS SSLA DLE+ KAV +L+ +D+ QA+D LK ++ S+ AA NLSF
Sbjct: 28 HWCVETIKNSYFSSLAVDLELKKAVIYLKQDDIQQAIDTLKYFEKKESNIAINAAINLSF 87
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
IY L+ ++ AE A+ A D+Y AAF+N G C+M +ED K ++++ALD D+T
Sbjct: 88 IYILKKDITTAESYADTAKKIDSYCPAAFINSGVCSMMKEDLETAKLMFMNALDIDSTSF 147
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVP--SMPEVLYQIASLYEITGDVEQASDVNE 292
EALYN+GL K L ++++SL F K+ + + PEVLYQIASLY++ GDV A +
Sbjct: 148 EALYNIGLIFKKLGDHNNSLLYFRKIISNLGHEQHPEVLYQIASLYDLLGDVGTALEYYL 207
Query: 293 NLL 295
LL
Sbjct: 208 QLL 210
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Query: 339 NWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSF 394
+WCV++I+NS SSLA DLE+ KAV +L+ +D+ QA+D LK ++ S +AA NLSF
Sbjct: 28 HWCVETIKNSYFSSLAVDLELKKAVIYLKQDDIQQAIDTLKYFEKKESNIAINAAINLSF 87
Query: 395 IYFL 398
IY L
Sbjct: 88 IYIL 91
>gi|290997550|ref|XP_002681344.1| hypothetical protein NAEGRDRAFT_63280 [Naegleria gruberi]
gi|284094968|gb|EFC48600.1| hypothetical protein NAEGRDRAFT_63280 [Naegleria gruberi]
Length = 820
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 134/211 (63%), Gaps = 8/211 (3%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
NDAL ++ + + IL SAKLIA IED++ GY++ ++ +++ ++ +
Sbjct: 367 NDALRDYLKDHQRKQFDFILKSAKLIAELIEDDWEKGYDFVIEQLKSYELKREKCNIVSE 426
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
+E+ KA+T+++ S+A++ LKS ++ + + +ATNLSF+Y L+G+++ AEK A A
Sbjct: 427 VEMTKALTYMKHKQFSKAIEALKSFEKKDRKLQARSATNLSFLYLLEGDMKNAEKYASTA 486
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+D YN+ A VN GNC ++ + KE Y AL+ ++ C++A+YNLG+ + L EY +
Sbjct: 487 VESDKYNANALVNRGNCHYLNKELREAKEYYQRALECESDCVQAIYNLGIVTRDLREYEE 546
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
SL CF K+ +++P EV+YQ+AS++ GD
Sbjct: 547 SLACFRKVHSMIPENIEVIYQLASVHSKMGD 577
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 170/401 (42%), Gaps = 93/401 (23%)
Query: 11 MEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIELTFS-- 68
ME + ++ES + +N+DF AL+KAK A +E+ L++ +E+ N+EL++
Sbjct: 152 MELGVHRSVEESALLCQNKDFALALDKAKEAEKREKALLRFREEKQINQEQNVELSYVVQ 211
Query: 69 -NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN 127
N+ R + ++L E + I +RN
Sbjct: 212 FNLARVYQLNGMYTESL---------ETYEAI-------------------------VRN 237
Query: 128 SAHSSLAQDLEINKAVTFLRMNDVSQAVDVLK-SCDEMTSSAATNLSFIYFLQGEVEQAE 186
A A L +N + D A+ + + + D++T+ T ++ ++ +
Sbjct: 238 KATFEHAGRLRVNMGNIYFEKGDYPLAIKMYRMALDQITNDYKT-------IRNKIRK-- 288
Query: 187 KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKH 246
N+G + Y + ++N+ I+A +NL + H
Sbjct: 289 ------------------NIGVSLIKLGQYSDAISNFEEVIENNNNDIDAAFNLVVCHFS 330
Query: 247 LNEYSDSLECFHKLQAI-VPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALS 305
+ + F +L + +P +P ++ D N L+ NDAL
Sbjct: 331 TGNKKEMRKAFLRLLNVNIPGLP---------------ADEDLDDEHNSLI----NDALR 371
Query: 306 QLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQDLEINK 361
++ + + IL SAKLIA IED++ GY++ ++ +++ ++ ++E+ K
Sbjct: 372 DYLKDHQRKQFDFILKSAKLIAELIEDDWEKGYDFVIEQLKSYELKREKCNIVSEVEMTK 431
Query: 362 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
A+T+++ S+A++ LKS + ++ + +ATNLSF+Y L
Sbjct: 432 ALTYMKHKQFSKAIEALKSFEKKDRKLQARSATNLSFLYLL 472
>gi|323452044|gb|EGB07919.1| hypothetical protein AURANDRAFT_10223 [Aureococcus anophagefferens]
Length = 615
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 141/229 (61%), Gaps = 8/229 (3%)
Query: 80 RNDALSQLHREMKHEAEKCILTSAKLIAPSIE--DNFSNGYNWCVQSIRNSAHSSLAQDL 137
R D L + + EA +LT+A+LIAP ++ D+ GY + +++ H LA ++
Sbjct: 272 RADGLRHELKRREKEAHGYMLTAARLIAPELKAPDDAMVGYRLIIDALKPD-HELLASEM 330
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EI +A+ ++R D +A++ LK+ ++ + + AATNLSFIYFL+G++ AE+ A+ A
Sbjct: 331 EIERALKYMRNKDFDKAIEALKAFEKKDQHLKAMAATNLSFIYFLEGDLRAAERYADLAY 390
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
D YN+ A VN GNC + ++ K+ Y+ A+ +A C+EA+YNLGL + + +S++
Sbjct: 391 EQDRYNARALVNKGNCLTVKHEHETAKQFYLEAIGVEADCVEAIYNLGLVNLKMELWSEA 450
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND 302
L+ F KL IVP+ EV+YQI++L+E G ++ A N+L+ V +D
Sbjct: 451 LQAFEKLHQIVPNNAEVIYQISALHEARGQLDIALKWY-NILITRVPSD 498
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 204 VNLGNCAMAREDYVKGKELY-VHALD---NDATCI--EALYNLGLAHKHLNEYSDSLECF 257
VN+GN ++ Y ++Y + ALD N I + N+G A L ++ D+++ +
Sbjct: 152 VNMGNIYYEQQKYQTAIKMYRMAALDQIPNTGKHIRFKIFRNIGNAFVRLGQFGDAVQSY 211
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQ---------------ASDVNENLLLEAVRN- 301
+ P + + Y GD E+ D ++ A R+
Sbjct: 212 ETIMGGDPDF-HTGFNLILCYYALGDAEKMRRGFQKLISIPLASGGDAKDDAKATATRDL 270
Query: 302 ---DALSQLHREMKHEAEKCILTSAKLIAPSIE--DNFSNGYNWCVQSIRNSAHSSLAQD 356
D L + + EA +LT+A+LIAP ++ D+ GY + +++ H LA +
Sbjct: 271 ARADGLRHELKRREKEAHGYMLTAARLIAPELKAPDDAMVGYRLIIDALKPD-HELLASE 329
Query: 357 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
+EI +A+ ++R D +A++ LK+ ++ + + AATNLSFIYFL
Sbjct: 330 MEIERALKYMRNKDFDKAIEALKAFEKKDQHLKAMAATNLSFIYFL 375
>gi|159484104|ref|XP_001700100.1| intraflagellar transport particle protein 88 [Chlamydomonas
reinhardtii]
gi|158272596|gb|EDO98394.1| intraflagellar transport particle protein 88 [Chlamydomonas
reinhardtii]
Length = 782
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 137/247 (55%), Gaps = 12/247 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIE--DNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+D L R+ + I+ +A+LI+ ++ + F G+ WC + +R++ ++ LA ++E
Sbjct: 348 DDGLKDEMRKRNTIITRLIVKAAQLISEKVDRANGFEGGFMWCCEQLRDAGYTKLANEVE 407
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
+ KA F+ +AV V K ++ + + AATNL+F+YFL+GE +QA+K +E A
Sbjct: 408 LAKATRFMGQKQFDKAVGVFKDFEKKEPRVKARAATNLAFLYFLEGETDQADKYSEMALK 467
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D YN+ A+VN G + R D + L+ A D C+EA+YNLGL + LNE +L
Sbjct: 468 SDRYNARAYVNKGCVLVERGDLEGARSLFNEAAGIDPYCVEAIYNLGLVSQRLNELPYAL 527
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA-----LSQLHR 309
F KL +VP EV++QIA+ Y++ GD + A E LL V ND L +H
Sbjct: 528 AAFKKLHNMVPDNVEVIHQIATTYDMMGDFKNAVKWFE-LLTSLVSNDPGVLARLGAIHA 586
Query: 310 EMKHEAE 316
EA+
Sbjct: 587 RFDDEAK 593
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDN-DATCIEALY----NLGLAHKHLNEYSDSLECFH 258
VN+GN ++ Y ++Y ALD AT E + N+GL+ + +Y D+L+ F
Sbjct: 225 VNMGNIHFEQKKYPSAIKMYRMALDQISATAKEVRFKIMRNIGLSFVRMGQYPDALQSFA 284
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEA-------------------- 298
+ VP + Y + D E + LL +
Sbjct: 285 TVMDNVPDH-QTGYNLVMCNYALSDREGMKNAFIKLLKVSPPSEMDDDDDDDPMGDDDMQ 343
Query: 299 --VRNDALSQLHREMKHEAEKCILTSAKLIAPSIE--DNFSNGYNWCVQSIRNSAHSSLA 354
+D L R+ + I+ +A+LI+ ++ + F G+ WC + +R++ ++ LA
Sbjct: 344 VMTMDDGLKDEMRKRNTIITRLIVKAAQLISEKVDRANGFEGGFMWCCEQLRDAGYTKLA 403
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
++E+ KA F+ +AV V K ++ + + AATNL+F+YFL
Sbjct: 404 NEVELAKATRFMGQKQFDKAVGVFKDFEKKEPRVKARAATNLAFLYFL 451
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ ME+ + L+++S A D +ALE A A ER L + +EQ AD N+
Sbjct: 122 PEEQARGMEKTVHELLEKSAADAAKNDINSALENAMEAKKNERKLCRFREQNNMADQINL 181
Query: 64 ELTFS 68
EL ++
Sbjct: 182 ELMYA 186
>gi|11528335|gb|AAG37228.1|AF298884_1 intraflagellar transport particle protein IFT88 [Chlamydomonas
reinhardtii]
Length = 782
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 137/247 (55%), Gaps = 12/247 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIE--DNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+D L R+ + I+ +A+LI+ ++ + F G+ WC + +R++ ++ LA ++E
Sbjct: 348 DDGLKDEMRKRNTIITRLIVKAAQLISEKVDRANGFEGGFMWCCEQLRDAGYTKLANEVE 407
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
+ KA F+ +AV V K ++ + + AATNL+F+YFL+GE +QA+K +E A
Sbjct: 408 LAKATRFMGQKQFDKAVGVFKDFEKKEPRVKARAATNLAFLYFLEGETDQADKYSEMALK 467
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D YN+ A+VN G + R D + L+ A D C+EA+YNLGL + LNE +L
Sbjct: 468 SDRYNARAYVNKGCVLVERGDLEGARSLFNEAAGIDPYCVEAIYNLGLVSQRLNELPYAL 527
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA-----LSQLHR 309
F KL +VP EV++QIA+ Y++ GD + A E LL V ND L +H
Sbjct: 528 AAFKKLHNMVPDNVEVIHQIATTYDMMGDFKNAVKWFE-LLTSLVSNDPGVLARLGAIHA 586
Query: 310 EMKHEAE 316
EA+
Sbjct: 587 RFDDEAK 593
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDN-DATCIEALY----NLGLAHKHLNEYSDSLECFH 258
VN+GN ++ Y ++Y ALD AT E + N+GL+ + +Y D+L+ F
Sbjct: 225 VNMGNIHFEQKKYPSAIKMYRMALDQISATAKEVRFKIMRNIGLSFVRMGQYPDALQSFA 284
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEA-------------------- 298
+ VP + Y + D E + LL +
Sbjct: 285 TVMDNVPDH-QTGYNLVMCNYALSDREGMKNAFIKLLKVSPSSEMDDDDDDDPMGDDDMQ 343
Query: 299 --VRNDALSQLHREMKHEAEKCILTSAKLIAPSIE--DNFSNGYNWCVQSIRNSAHSSLA 354
+D L R+ + I+ +A+LI+ ++ + F G+ WC + +R++ ++ LA
Sbjct: 344 VMTMDDGLKDEMRKRNTIITRLIVKAAQLISEKVDRANGFEGGFMWCCEQLRDAGYTKLA 403
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
++E+ KA F+ +AV V K ++ + + AATNL+F+YFL
Sbjct: 404 NEVELAKATRFMGQKQFDKAVGVFKDFEKKEPRVKARAATNLAFLYFL 451
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ ME+ + L+++S A D +ALE A A ER L + +EQ AD N+
Sbjct: 122 PEEQARGMEKTVHELLEKSAADAAKNDINSALENAMEAKKNERKLCRFREQNNMADQINL 181
Query: 64 ELTFS 68
EL ++
Sbjct: 182 ELMYA 186
>gi|145515391|ref|XP_001443595.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410984|emb|CAK76198.1| unnamed protein product [Paramecium tetraurelia]
Length = 736
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 126/208 (60%), Gaps = 10/208 (4%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
D L + +E + EA I+TSAKLIAP IED+ GY W ++ ++NS ++EI K
Sbjct: 320 DKLREDTKERRREAVHYIVTSAKLIAPLIEDDIIVGYEWILEQLKNSTFPEAETEIEICK 379
Query: 142 AVTFLRMNDVSQAVDVLKSCDE--MTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYN 199
A+ L+ ++ ++++ LK + + + ++F AEK AE A T D YN
Sbjct: 380 AMAHLKKKNIEKSIETLKGLRKKGQINYGSHCYKHLFF-------AEKYAEIAITYDRYN 432
Query: 200 SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHK 259
+ A VN GNC + ++++ KE Y+ A+ +A CIEALYNL ++ LN + +SL+ K
Sbjct: 433 AKALVNRGNCLYVKNEFLRAKEQYLEAIGVEADCIEALYNLAYVNRKLNMFVESLQALDK 492
Query: 260 LQAIVPSMPEVLYQIASLYEITGDVEQA 287
LQ IV +PEVLYQ+A+LYE+TG+ +QA
Sbjct: 493 LQTIV-CIPEVLYQMATLYEMTGNSKQA 519
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-NDATCIEALYNL--GLAHKHLNEYSDS-LECFHK 259
VN+GN ++ Y ++Y ALD AT E + + + H + + + LE +
Sbjct: 201 VNMGNIYFEQKKYPTAIKMYKMALDLIPATSKEMRFKIQKNIGHAQVRQGKEKILEAINT 260
Query: 260 LQAIV---PSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN--------------- 301
+ I+ P P + LY +G + D LL +
Sbjct: 261 YEQILKSSPDFPTGFNLMICLY-FSGIKNKMKDYFVTLLTIEIPGESEEENNENKGTTIT 319
Query: 302 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 361
D L + +E + EA I+TSAKLIAP IED+ GY W ++ ++NS ++EI K
Sbjct: 320 DKLREDTKERRREAVHYIVTSAKLIAPLIEDDIIVGYEWILEQLKNSTFPEAETEIEICK 379
Query: 362 AVTFLRMNDVSQAVDVLKS 380
A+ L+ ++ ++++ LK
Sbjct: 380 AMAHLKKKNIEKSIETLKG 398
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+F+ ME+EI LI++S I + LEKAK A NKE+ L + +E A+S N
Sbjct: 98 PEEQFKGMEKEINTLIEQSAIAKLRGNLSECLEKAKEAFNKEKKLRQSKEAQNLAESINA 157
Query: 64 ELTF 67
+L++
Sbjct: 158 DLSY 161
>gi|17569127|ref|NP_508511.1| Protein OSM-5 [Caenorhabditis elegans]
gi|12659061|gb|AAK01173.1|AF314195_1 OSM-5 [Caenorhabditis elegans]
gi|373220556|emb|CCD74417.1| Protein OSM-5 [Caenorhabditis elegans]
Length = 820
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 131/217 (60%), Gaps = 6/217 (2%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+ + +D L + K +AEK I+T+ K+I+P I +++ GY WC++S++ S H+ LA +
Sbjct: 344 QTLNSDMLKNWEKRNKSDAEKAIITAVKIISPVIAPDYAIGYEWCLESLKQSVHAPLAIE 403
Query: 137 LEINKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATN-LSFIYFLQG--EVEQAEKMAE 190
LE+ KA ++ D+ A++VLK S D T+SAA N L + FLQG + A++ A+
Sbjct: 404 LEMTKAGELMKNGDIEGAIEVLKVFNSQDSKTASAAANNLCMLRFLQGGRRLVDAQQYAD 463
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
+A + D YN+ A VN GN A D K Y AL+NDA+C++AL+N+GL K
Sbjct: 464 QALSIDRYNAHAQVNQGNIAYMNGDLDKALNNYREALNNDASCVQALFNIGLTAKAQGNL 523
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+LE F+KL I+ + +VL Q+AS+YE D QA
Sbjct: 524 EQALEFFYKLHGILLNNVQVLVQLASIYESLEDSAQA 560
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDN-----DATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + ++ K + Y ALD T I+ L N+G+ + Y D++ F
Sbjct: 226 VNIGNIHFRKREFTKALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGSYDDAISTFD 285
Query: 259 KLQAIVPSMPEVLYQI----------------ASLYEITG----DVEQASDVNENLLLEA 298
P+ L I + +I G D + D ++ LL +
Sbjct: 286 HCVEENPNFITALNLILVAFCIQDAEKMREAFVKMIDIPGFPDDDYMKEKDDDDVLLNQT 345
Query: 299 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 358
+ +D L + K +AEK I+T+ K+I+P I +++ GY WC++S++ S H+ LA +LE
Sbjct: 346 LNSDMLKNWEKRNKSDAEKAIITAVKIISPVIAPDYAIGYEWCLESLKQSVHAPLAIELE 405
Query: 359 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAAT-NLSFIYFL 398
+ KA ++ D+ A++VLK S D T+SAA NL + FL
Sbjct: 406 MTKAGELMKNGDIEGAIEVLKVFNSQDSKTASAAANNLCMLRFL 449
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 30/233 (12%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSH 61
E EEK +ME +++ ++ ES + + + FK AL+KAK A +ER ++K +EQ G +
Sbjct: 121 ENGEEKCRQMENKVMEMLRESMLASEKKKFKEALDKAKEAGRRERAVVKHREQQGLVEMM 180
Query: 62 NIELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNG- 117
N++LTF+ N+ ++ A + N+AL+ +++ K S +L +F
Sbjct: 181 NLDLTFTVLFNLAQQYEANDMTNEALNTYEIIVRN---KMFPNSGRLKVNIGNIHFRKRE 237
Query: 118 YNWCVQSIRNSAH--SSLAQDLEI----NKAVTFLRMNDVSQAVDVLKSCDEMTSS--AA 169
+ ++ R + S+ +D I N VTF+RM A+ C E + A
Sbjct: 238 FTKALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGSYDDAISTFDHCVEENPNFITA 297
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC-AMAREDYVKGKE 221
NL + F ++ AEKM E AFV + + +DY+K K+
Sbjct: 298 LNLILVAFC---IQDAEKMRE-----------AFVKMIDIPGFPDDDYMKEKD 336
>gi|302837454|ref|XP_002950286.1| hypothetical protein VOLCADRAFT_101916 [Volvox carteri f.
nagariensis]
gi|300264291|gb|EFJ48487.1| hypothetical protein VOLCADRAFT_101916 [Volvox carteri f.
nagariensis]
Length = 776
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 138/249 (55%), Gaps = 12/249 (4%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIE--DNFSNGYNWCVQSIRNSAHSSLAQD 136
V +D L + R+ + I+ +A+LI+ ++ + F G+ WC + +R + ++ LA +
Sbjct: 345 VADDGLKEELRKRNSAITRLIVKAAQLISEKVDRANGFEGGFQWCCEQLREAGYTKLANE 404
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
+E+ KA F+ +AV V K ++ + + AATNL+F+YFL+GE +QA+K +E A
Sbjct: 405 VELAKATRFMGQKQFDKAVSVFKEFEKKEPRVKARAATNLAFLYFLEGETDQADKYSEMA 464
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+D YN+ A+VN G + R D + L+ D C+EA++NLGL + LNE +
Sbjct: 465 LKSDRYNARAYVNKGCVLVERGDLEGARSLFNEGAGIDPYCVEAIFNLGLVSQRLNELTY 524
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA-----LSQL 307
+L F KL +VP EV++QIA+ Y++ GD + A E +L V ND L +
Sbjct: 525 ALAAFKKLYNMVPDNVEVIHQIATTYDMMGDFKNAVKWFE-MLTSLVPNDPGVLARLGAI 583
Query: 308 HREMKHEAE 316
H EA+
Sbjct: 584 HARFDDEAK 592
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 44/315 (13%)
Query: 121 CVQSIRNSA--HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFL 178
CV+ NSA H+ A+ E K F + ++++ ++ E+ + NL+ +Y +
Sbjct: 143 CVKGDMNSALEHAMEAKKNE-RKLCRFRQQQNMAEQIN-----PELMYAIDFNLAHMYHM 196
Query: 179 QGEVEQAEKMAEEACTADTYNSAAF--VNLGNCAMAREDYVKGKELYVHALDNDATC--- 233
+A + + Y + + VN+GN + ++ Y ++Y ALD A
Sbjct: 197 NRNYSEALNLYQAIVRNKDYPQSGWLRVNMGNIYLEQKKYPTAIKMYRMALDQIAATAKE 256
Query: 234 --IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVN 291
+ + N+G+A L +Y D+L+ F + VP + Y + D E
Sbjct: 257 VRFKIMRNIGIAFVKLGQYPDALQSFATVMDNVPDH-QTGYNLVMCNYALSDREGMKTAF 315
Query: 292 ENLL---------------------LEA-VRNDALSQLHREMKHEAEKCILTSAKLIAPS 329
+ LL ++A V +D L + R+ + I+ +A+LI+
Sbjct: 316 QKLLKVSPPQEMDDDDDDVLNDEDEMQAVVADDGLKEELRKRNSAITRLIVKAAQLISEK 375
Query: 330 IE--DNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE---- 383
++ + F G+ WC + +R + ++ LA ++E+ KA F+ +AV V K ++
Sbjct: 376 VDRANGFEGGFQWCCEQLREAGYTKLANEVELAKATRFMGQKQFDKAVSVFKEFEKKEPR 435
Query: 384 MTSSAATNLSFIYFL 398
+ + AATNL+F+YFL
Sbjct: 436 VKARAATNLAFLYFL 450
>gi|268577637|ref|XP_002643801.1| C. briggsae CBR-OSM-5 protein [Caenorhabditis briggsae]
Length = 818
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 132/217 (60%), Gaps = 6/217 (2%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+ + +DAL ++ K+EAEK I+T+ K+I+P I +++ GY WC++S++ S H+ LA D
Sbjct: 344 QTLNSDALRHWEKQQKNEAEKAIITAVKIISPLIAPDYAIGYEWCLESLKQSTHAVLAID 403
Query: 137 LEINKAVTFLRMNDVSQAVDVLK---SCDEMTSSAAT-NLSFIYFLQG--EVEQAEKMAE 190
LE+ KA ++ D+ AV+VLK + D T++AA NL + FLQG + A++ A+
Sbjct: 404 LEMTKAGEMMKNGDIESAVEVLKIFNAQDSKTAAAAANNLCMLRFLQGGRRLVDAQQYAD 463
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
+A + D +++ A VN GN D K Y AL NDA+C++AL+N+GLA K
Sbjct: 464 QALSIDRFSAHALVNQGNIHYMNGDLDKAMAHYREALTNDASCVQALFNIGLASKAQGNL 523
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+LE F KL I+ + +VL Q+AS+YE D QA
Sbjct: 524 ELALEYFFKLHGILVNNVQVLVQLASIYESLEDSAQA 560
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 29/224 (12%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDN-----DATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN R ++ K + Y ALD T I+ L N+G+ + Y D++ F
Sbjct: 226 VNIGNIHYKRREFTKALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGSYDDAVNTFE 285
Query: 259 KLQAIVPSMPEVLYQIAS----------------LYEITG----DVEQASDVNENLLLEA 298
+ P+ L I + L +I G + + + ++ LL +
Sbjct: 286 HVVEEQPNFASALNLILTSFCIQDAEKMRESFLKLIDIPGFPDDEFMKEKEDDDVLLNQT 345
Query: 299 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 358
+ +DAL ++ K+EAEK I+T+ K+I+P I +++ GY WC++S++ S H+ LA DLE
Sbjct: 346 LNSDALRHWEKQQKNEAEKAIITAVKIISPLIAPDYAIGYEWCLESLKQSTHAVLAIDLE 405
Query: 359 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAAT-NLSFIYFL 398
+ KA ++ D+ AV+VLK + D T++AA NL + FL
Sbjct: 406 MTKAGEMMKNGDIESAVEVLKIFNAQDSKTAAAAANNLCMLRFL 449
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 24/204 (11%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSH 61
E EEK ++ME +++ ++ ES I + + +K AL+K K A +ER ++K +EQ G +S
Sbjct: 121 ESEEEKCKQMENKVMDMLRESMIASEKKKYKEALDKGKEAGRRERAVVKHREQSGLVESM 180
Query: 62 NIELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSN-- 116
N++LTF+ N+ ++ A + N+AL+ +++ K S +L N N
Sbjct: 181 NLDLTFTVLFNLAQQYEANDMTNEALNTYEIIVRN---KMFPNSGRLRV-----NIGNIH 232
Query: 117 ----GYNWCVQSIRNSAH--SSLAQDLEI----NKAVTFLRMNDVSQAVDVLKSCDEMTS 166
+ ++ R + S+ +D I N VTF+RM AV+ + E
Sbjct: 233 YKRREFTKALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGSYDDAVNTFEHVVEEQP 292
Query: 167 SAATNLSFIYFLQGEVEQAEKMAE 190
+ A+ L+ I ++ AEKM E
Sbjct: 293 NFASALNLI-LTSFCIQDAEKMRE 315
>gi|255078738|ref|XP_002502949.1| intraflagellar transport particle protein IFT88 [Micromonas sp.
RCC299]
gi|226518215|gb|ACO64207.1| intraflagellar transport particle protein IFT88 [Micromonas sp.
RCC299]
Length = 768
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 149/262 (56%), Gaps = 12/262 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEIN 140
+D L Q+ RE + EA + IL +AKLI P I N GY + ++ + + LA +LE+
Sbjct: 338 DDGLRQMMREKQLEARRKILQAAKLIGPKIAGNEELGYEFLLEEMHAHGYEFLANELEME 397
Query: 141 KAVTFLRMNDVS--QAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
+A+ LR + + LK ++ + + AATNLSF+YF +G+ E AEK A+ +
Sbjct: 398 QALAHLRGRGANFEEGKRALKEFEKKEHALKARAATNLSFLYFAEGDFENAEKYADMSVE 457
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
++ Y+++A VN GNC + R D ++ Y+ A+ +A C++A+YNLGL +K L +Y D+L
Sbjct: 458 SNRYDASALVNKGNCMLQRGDMEGARDCYLEAVGVEADCVDAIYNLGLVNKRLEQYQDAL 517
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGD----VEQASDVNENLLLEAVRNDALSQLHRE 310
F K+ +I+P+ PE +Q+A + E+ G+ ++Q ++ L + L LH E
Sbjct: 518 VNFRKVISIIPNDPEATWQLADVCELMGNRSMAIKQFDLLHARLPTDPGVLARLGALHAE 577
Query: 311 MKHEAE--KCILTSAKLIAPSI 330
EA+ +C S ++ P+I
Sbjct: 578 AGDEAKALQCYNESHRVYPPNI 599
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 48/239 (20%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN ++DY K ++Y A+D ++ N+ +A + +Y D+ +
Sbjct: 205 VNMGNVYFNQKDYQKAIKMYRMAIDQVPANQRWLRMKITRNVAMAFIRMGQYVDAA---N 261
Query: 259 KLQAIVPSMPEV--LYQIASLYEITGDV----------------------EQASDVNENL 294
L I+ + P+V +Q+ + GD E D
Sbjct: 262 TLGEIMDNEPDVHTGFQLVVCHYAVGDKDKMKRAFIALLKLRAYESDEPDEDGDDTAGGA 321
Query: 295 LLEAVR----------NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQS 344
L A R +D L Q+ RE + EA + IL +AKLI P I N GY + ++
Sbjct: 322 GLGATRRGATADDVLGDDGLRQMMREKQLEARRKILQAAKLIGPKIAGNEELGYEFLLEE 381
Query: 345 IRNSAHSSLAQDLEINKAVTFLRMNDVS--QAVDVLKSCDE----MTSSAATNLSFIYF 397
+ + LA +LE+ +A+ LR + + LK ++ + + AATNLSF+YF
Sbjct: 382 MHAHGYEFLANELEMEQALAHLRGRGANFEEGKRALKEFEKKEHALKARAATNLSFLYF 440
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 18 LIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIELTFS 68
L++ S N+D+ A+E A+ A +ER L +++E G DS N+EL F+
Sbjct: 116 LLEASSRAQINKDWARAVETAREACKRERQLARVRENAGMGDSQNLELAFA 166
>gi|344236126|gb|EGV92229.1| Intraflagellar transport protein 88-like [Cricetulus griseus]
Length = 533
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 38/223 (17%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA DL
Sbjct: 268 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIESSFAVGYNWCVEVVKASQYVELANDL 327
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
EINKA+T+LR D +Q + E QA A+ A +D
Sbjct: 328 EINKAITYLRQKDFNQ-------------------------ENEFAQASSYADLAVNSDR 362
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKH----------- 246
YN +A N GN A DY K E Y AL ND++C EALYN+ H++
Sbjct: 363 YNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIVKVHQNERNQSVFPIQY 422
Query: 247 --LNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + + ++E +L ++VP+ + L ++ LY+ GD QA
Sbjct: 423 ELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSEGDKSQA 465
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 117/226 (51%), Gaps = 39/226 (17%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 146 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFE 205
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + I GD E+ + D + NL
Sbjct: 206 HIMSMAPNLKAGFNLILSCFAI-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 264
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
L+EA++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GYNWCV+ ++ S + LA
Sbjct: 265 LVEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIESSFAVGYNWCVEVVKASQYVELA 324
Query: 355 QDLEINKAVTFLRMNDVSQA---------VDVLKSCDEMTSSAATN 391
DLEINKA+T+LR D +Q D+ + D SA TN
Sbjct: 325 NDLEINKAITYLRQKDFNQENEFAQASSYADLAVNSDRYNPSALTN 370
>gi|109944604|emb|CAI72670.1| polaris [Oryctolagus cuniculus]
Length = 258
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 98/146 (67%), Gaps = 4/146 (2%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DL
Sbjct: 113 AIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDL 172
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QAVD LK ++ + S+AATNLSF+Y+L+ E QA A+ A
Sbjct: 173 EINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAV 232
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKG 219
+D YN +A N GN A DY K
Sbjct: 233 NSDRYNPSALTNKGNTVFANGDYEKA 258
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 34/217 (15%)
Query: 215 DYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
+Y K + Y ALD + I+ + N+G+ +YSD++ F + ++ P++
Sbjct: 2 NYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKA 61
Query: 270 VLYQIASLYEITGDVEQ------------------------ASDVNENLLLEAVRNDALS 305
I S + I GD E+ + D + NL++EA++ND L
Sbjct: 62 GFNLILSYFAI-GDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAIKNDHLR 120
Query: 306 QLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTF 365
Q+ RE K AEK I+T+AKLIAP IE +F+ GY+WCV+ ++ S + LA DLEINKA+T+
Sbjct: 121 QMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITY 180
Query: 366 LRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
LR D +QAVD LK ++ + S+AATNLSF+Y+L
Sbjct: 181 LRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYL 217
>gi|341874727|gb|EGT30662.1| CBN-OSM-5 protein [Caenorhabditis brenneri]
Length = 825
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 126/208 (60%), Gaps = 6/208 (2%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+ + +D L + MK E EK I+T+ K+I+P I +++ GY WC++S++ S H+ LA +
Sbjct: 337 QTLSSDMLRNYEKHMKTEFEKAIITAVKIISPVIAPDYAIGYEWCLESLKQSVHAPLAIE 396
Query: 137 LEINKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATN-LSFIYFLQG--EVEQAEKMAE 190
LE+ KA ++ D+ A++VLK S D T+SAA N L + FLQG + A++ A+
Sbjct: 397 LEMTKAGELMKNGDIDGAIEVLKVFNSQDSKTASAAANNLCMLRFLQGGRRLLDAQQYAD 456
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
+A + D YNS A VN GN A D K Y AL NDA+C++AL+N+GL K
Sbjct: 457 QALSIDRYNSHAQVNQGNIAYMNGDLEKALSNYREALSNDASCVQALFNIGLTAKAQGNL 516
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLY 278
+LE F+KL I+ + +VL Q+AS+Y
Sbjct: 517 EQALEYFYKLHGILLNNVQVLVQLASMY 544
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDN-----DATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + ++ K + Y ALD T I+ L N+G+ + Y D++ F
Sbjct: 219 VNIGNIYFKKREFTKALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGSYDDAVSTFE 278
Query: 259 KLQAIVPSMPEVLYQI----------------ASLYEITG----DVEQASDVNENLLLEA 298
P L I L +I G + + D ++ LL +
Sbjct: 279 HCVEEHPDFSTALNLILVSFCIQDAEKMRESFVKLIDIPGFPDDEFLKEKDDDDVLLNQT 338
Query: 299 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 358
+ +D L + MK E EK I+T+ K+I+P I +++ GY WC++S++ S H+ LA +LE
Sbjct: 339 LSSDMLRNYEKHMKTEFEKAIITAVKIISPVIAPDYAIGYEWCLESLKQSVHAPLAIELE 398
Query: 359 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAAT-NLSFIYFL 398
+ KA ++ D+ A++VLK S D T+SAA NL + FL
Sbjct: 399 MTKAGELMKNGDIDGAIEVLKVFNSQDSKTASAAANNLCMLRFL 442
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSH 61
E EEK ++ME +++ ++ ES I + + +K AL+K K A +ER ++K +EQ G DS
Sbjct: 114 EDGEEKCKQMENKVMDMLRESMIASEKKKYKEALDKGKEAGRRERAVVKHREQQGLVDSM 173
Query: 62 NIELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGY 118
N++LTF+ N+ ++ A + +AL+ +++ K S +L N N Y
Sbjct: 174 NLDLTFTVLFNLAQQYEANDMTTEALNTYEIIVRN---KMFPNSGRLRV-----NIGNIY 225
Query: 119 ------NWCVQSIRNSAH--SSLAQDLEI----NKAVTFLRMNDVSQAVDVLKSCDEMTS 166
++ R + S+ +D I N VTF+RM AV + C E
Sbjct: 226 FKKREFTKALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGSYDDAVSTFEHCVEEHP 285
Query: 167 --SAATNLSFIYFLQGEVEQAEKMAE 190
S A NL + F ++ AEKM E
Sbjct: 286 DFSTALNLILVSFC---IQDAEKMRE 308
>gi|145542364|ref|XP_001456869.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424683|emb|CAK89472.1| unnamed protein product [Paramecium tetraurelia]
Length = 730
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 129/210 (61%), Gaps = 13/210 (6%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
D L + +E + EA I+TSAKLIAP IED+ W R +++Q L++
Sbjct: 313 DKLREDTKERRREAIYYIVTSAKLIAPLIEDDI---IIWIRMDFRVVKEFNISQKLKLKL 369
Query: 142 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
++ ++++ LK + ++ + ATN+SF+YFL+ + +QAEK AE A T D
Sbjct: 370 KFK-----NIEKSIETLKGFEKKDKQIMARIATNISFLYFLENDYKQAEKYAEIAITYDR 424
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
YN+ A VN GNC + ++++ KE Y+ A+ +A CIEALYNL ++ LN + +SL+
Sbjct: 425 YNAKALVNRGNCLYVKNEFLRAKEQYLEAIGVEADCIEALYNLAYVNRKLNMFVESLQAL 484
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
KLQ IV +PEVLYQ+A+LYE+TG+ +QA
Sbjct: 485 DKLQTIV-CIPEVLYQMATLYEMTGNSKQA 513
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+F+ +E+EI LI++S + + LEKAK A NKE+ L + +E A+S N
Sbjct: 96 PEEQFKSIEKEINNLIEQSAMAKLRGNLSECLEKAKEAFNKEKKLRQSKEAQNLAESINT 155
Query: 64 ELTF 67
+L++
Sbjct: 156 DLSY 159
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 302 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 361
D L + +E + EA I+TSAKLIAP IED+ W R +++Q L++
Sbjct: 313 DKLREDTKERRREAIYYIVTSAKLIAPLIEDDI---IIWIRMDFRVVKEFNISQKLKLKL 369
Query: 362 AVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFL 398
++ ++++ LK + ++ + ATN+SF+YFL
Sbjct: 370 KFK-----NIEKSIETLKGFEKKDKQIMARIATNISFLYFL 405
>gi|389593333|ref|XP_003721920.1| putative intraflagellar transport protein IFT88 [Leishmania major
strain Friedlin]
gi|321438422|emb|CBZ12177.1| putative intraflagellar transport protein IFT88 [Leishmania major
strain Friedlin]
Length = 811
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 133/211 (63%), Gaps = 9/211 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+LS++ +E + K I+T+A+LIAP + ++ GY++ + +R S +A +
Sbjct: 350 DDSLSRMRKERRARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHVASE 409
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL+G+ E E+ ++ +
Sbjct: 410 LEMCKNLNYLKHKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFLEGDYENGEQYSDLS 469
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ YN+ A VN GN + ++DY K KELY AL +A +EA+YNLGLA K L Y +
Sbjct: 470 LVANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEE 529
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
++ F ++QA+V S EVLYQIA L ++ GD
Sbjct: 530 AVRMFKRVQALVDS-SEVLYQIADLSDLVGD 559
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 37/229 (16%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-NDATCIEALY----NLGLAHKHLNEYSDSLECFH 258
VN+GN +A+++Y+ ++Y LD A E Y N+ A L +Y D+ +
Sbjct: 230 VNMGNIYLAQQNYLLAIKMYRKVLDETPAAGKEFRYHLCRNIANAFVKLGQYRDAANSY- 288
Query: 259 KLQAIVPSMPEV--LYQIASLYEITGDVEQASDVNENLL-------------------LE 297
+ +V +V + + Y G+ E+ L+ +
Sbjct: 289 --ETVVEGNGDVNATFNLILCYYALGETEKMKRTFTRLMNCRLAGLDGEEDFEEEEKRKD 346
Query: 298 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSL 353
+ +D+LS++ +E + K I+T+A+LIAP + ++ GY++ + +R S +
Sbjct: 347 VLVDDSLSRMRKERRARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHV 406
Query: 354 AQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
A +LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL
Sbjct: 407 ASELEMCKNLNYLKHKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFL 455
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EE+ ME+++ LI+ES + A +D+ AALEKAK A ER L K +EQ+G A+ N++
Sbjct: 128 EEELAEMEKQVNKLIEESAMLALQKDYGAALEKAKDAGKLERSLCKKREQYGLAEQINVD 187
Query: 65 LTFS 68
LT++
Sbjct: 188 LTYA 191
>gi|398017538|ref|XP_003861956.1| intraflagellar transport protein IFT88, putative [Leishmania
donovani]
gi|322500184|emb|CBZ35261.1| intraflagellar transport protein IFT88, putative [Leishmania
donovani]
Length = 811
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 133/211 (63%), Gaps = 9/211 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+LS++ +E + K I+T+A+LIAP + ++ GY++ + +R S +A +
Sbjct: 350 DDSLSRMRKERRARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHVASE 409
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL+G+ E E+ ++ +
Sbjct: 410 LEMCKNLNYLKHKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFLEGDYENGEQYSDLS 469
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ YN+ A VN GN + ++DY K KELY AL +A +EA+YNLGLA K L Y +
Sbjct: 470 LVANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEE 529
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
++ F ++QA+V S EVLYQIA L ++ GD
Sbjct: 530 AVRMFKRVQALVDS-SEVLYQIADLSDLVGD 559
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 37/229 (16%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALY-----NLGLAHKHLNEYSDSLECFH 258
VN+GN +A+++Y+ ++Y LD T + L N+ A L +Y D+ +
Sbjct: 230 VNMGNIYLAQQNYLLAIKMYRKVLDETPTAGKELRYHLCRNIANAFVKLGQYRDAANSY- 288
Query: 259 KLQAIVPSMPEV--LYQIASLYEITGDVEQASDVNENLL-------------------LE 297
+ +V + + + Y G+ E+ L+ +
Sbjct: 289 --ETVVEGNGDANATFNLILCYYALGETEKMKRTFTRLMNCRLAGLDGEEDFEEEEKRKD 346
Query: 298 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSL 353
+ +D+LS++ +E + K I+T+A+LIAP + ++ GY++ + +R S +
Sbjct: 347 VLVDDSLSRMRKERRARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHV 406
Query: 354 AQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
A +LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL
Sbjct: 407 ASELEMCKNLNYLKHKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFL 455
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EE+ ME+++ LI+ES + A +D+ AALEKAK A ER+L K +EQ+G A+ N++
Sbjct: 128 EEELAEMEKQVNKLIEESAMLALQKDYGAALEKAKDAGKLERLLCKKREQYGLAEQINVD 187
Query: 65 LTFS 68
LT++
Sbjct: 188 LTYA 191
>gi|389601777|ref|XP_001565882.2| putative intraflagellar transport protein IFT88 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|322505183|emb|CAM45400.2| putative intraflagellar transport protein IFT88 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 810
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 132/211 (62%), Gaps = 9/211 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D LS++ +E K I+T+A+LIAP + ++ GY++ + +RN S +A +
Sbjct: 350 DDGLSRMRKERHARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRNYEMRDPTSHVASE 409
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL+G+ + E+ ++ +
Sbjct: 410 LEMCKNLNYLKHKRYQEAINGLKEFEKKDKSLRARAATNLAYLYFLEGDYDSGEQYSDLS 469
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ YN+ A VN GN + ++DY K KELY AL +A +EA+YNLGLA K L Y +
Sbjct: 470 LGANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEE 529
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
++ F ++QA+V S EVLYQIA L ++ GD
Sbjct: 530 AVRTFKRMQALVDSN-EVLYQIADLSDLVGD 559
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALY-----NLGLAHKHLNEYSDSLECFH 258
VN+GN +A+++Y+ ++Y LD T + L N+ A L +Y D+ +
Sbjct: 230 VNMGNIYLAQQNYLLAIKMYRKVLDETPTAGKELRYHLCRNIANAFVKLGQYRDAANSY- 288
Query: 259 KLQAIVPSMPEV--LYQIASLYEITGDVEQASDVNENL-------------------LLE 297
+ +V +V Y + Y G+ EQ L +
Sbjct: 289 --ETVVEGNGDVNATYNLILCYYALGETEQMKRTFTRLTNCRLTGLDSEEDFEEEEKWKD 346
Query: 298 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSL 353
+ +D LS++ +E K I+T+A+LIAP + ++ GY++ + +RN S +
Sbjct: 347 VLVDDGLSRMRKERHARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRNYEMRDPTSHV 406
Query: 354 AQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
A +LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL
Sbjct: 407 ASELEMCKNLNYLKHKRYQEAINGLKEFEKKDKSLRARAATNLAYLYFL 455
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EE+ ME+++ LI+ES + A +D+ AALEKAK A ER L K +EQ+G + N++
Sbjct: 128 EEELAEMEKQVNKLIEESAMLALQKDYGAALEKAKDAGKLERSLCKKREQYGFVEQINVD 187
Query: 65 LTFS 68
LT++
Sbjct: 188 LTYA 191
>gi|146090777|ref|XP_001466347.1| putative intraflagellar transport protein IFT88 [Leishmania
infantum JPCM5]
gi|134070709|emb|CAM69062.1| putative intraflagellar transport protein IFT88 [Leishmania
infantum JPCM5]
Length = 811
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 133/211 (63%), Gaps = 9/211 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+LS++ +E + K I+T+A+LIAP + ++ GY++ + +R S +A +
Sbjct: 350 DDSLSRMRKERRARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHVASE 409
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL+G+ E E+ ++ +
Sbjct: 410 LEMCKNLNYLKHKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFLEGDYENGEQYSDLS 469
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ YN+ A VN GN + ++DY K KELY AL +A +EA+YNLGLA K L Y +
Sbjct: 470 LIANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEE 529
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
++ F ++QA+V S EVLYQIA L ++ GD
Sbjct: 530 AVRMFKRVQALVDS-SEVLYQIADLSDLVGD 559
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 37/229 (16%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALY-----NLGLAHKHLNEYSDSLECFH 258
VN+GN +A+++Y+ ++Y LD T + L N+ A L +Y D+ +
Sbjct: 230 VNMGNIYLAQQNYLLAIKMYRKVLDETPTAGKELRYHLCRNIANAFVKLGQYRDAANSY- 288
Query: 259 KLQAIVPSMPEV--LYQIASLYEITGDVEQASDVNENLL-------------------LE 297
+ +V + + + Y G+ E+ L+ +
Sbjct: 289 --ETVVEGNGDANATFNLILCYYALGETEKMKRTFTRLMNCRLAGLDGEEDFEEEEKRKD 346
Query: 298 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSL 353
+ +D+LS++ +E + K I+T+A+LIAP + ++ GY++ + +R S +
Sbjct: 347 VLVDDSLSRMRKERRARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHV 406
Query: 354 AQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
A +LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL
Sbjct: 407 ASELEMCKNLNYLKHKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFL 455
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EE+ ME+++ LI+ES + A +D+ AALEKAK A ER+L K +EQ+G A+ N++
Sbjct: 128 EEELAEMEKQVNKLIEESAMLALQKDYGAALEKAKDAGKLERLLCKKREQYGLAEQINVD 187
Query: 65 LTFS 68
LT++
Sbjct: 188 LTYA 191
>gi|401424405|ref|XP_003876688.1| putative intraflagellar transport protein IFT88 [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492931|emb|CBZ28212.1| putative intraflagellar transport protein IFT88 [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 811
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 133/211 (63%), Gaps = 9/211 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+LS++ +E + K I+T+A+LIAP + ++ GY++ + +R S +A +
Sbjct: 350 DDSLSRMCKERRARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHVASE 409
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL+G+ E E+ ++ +
Sbjct: 410 LEMCKNLNYLKHKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFLEGDYENGEQYSDLS 469
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ YN+ A VN GN + ++DY K KELY AL +A +EA+YNLGLA K L Y +
Sbjct: 470 LVANQYNAKALVNKGNFSFVKKDYEKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEE 529
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
++ F ++QA+V S EVLYQIA L ++ GD
Sbjct: 530 AVRMFKRVQALVDS-SEVLYQIADLSDLVGD 559
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 37/229 (16%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALY-----NLGLAHKHLNEYSDSLECFH 258
VN+GN +A+++Y+ ++Y LD T + L N+ A L +Y D+ +
Sbjct: 230 VNMGNIYLAQQNYLLAIKMYRKVLDETPTAGKELRYHLCRNIANAFVKLGQYRDAANSY- 288
Query: 259 KLQAIVPSMPEV--LYQIASLYEITGDVEQASDVNENLL-------------------LE 297
+ +V + + + Y G+ E+ L+ +
Sbjct: 289 --ETVVEGNGDANATFNLILCYYALGETEKMKRTFTRLMNCRLAGLDDEEDFEEEEKRKD 346
Query: 298 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSL 353
+ +D+LS++ +E + K I+T+A+LIAP + ++ GY++ + +R S +
Sbjct: 347 VLVDDSLSRMCKERRARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHV 406
Query: 354 AQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
A +LE+ K + +L+ +A++ LK ++ + + AATNL+++YFL
Sbjct: 407 ASELEMCKNLNYLKHKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFL 455
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EE+ ME+++ LI+ES + A +D+ AALEKAK A ER L K +EQ+G A+ N++
Sbjct: 128 EEELAEMEKQVNRLIEESAMLALQKDYGAALEKAKDAGKLERSLCKKREQYGLAEQINVD 187
Query: 65 LTFS 68
LT++
Sbjct: 188 LTYA 191
>gi|411170025|gb|AFW15936.1| intraflagellar transport protein 88 [Dunaliella salina]
Length = 799
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 128/215 (59%), Gaps = 7/215 (3%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQDL 137
V+ND L + R+ ++ +CI+ SA+LI+ IE ++ GY+WC + +R + + LA ++
Sbjct: 346 VQNDGLREELRKRQNYITRCIVNSAQLISEKIEKAGYAAGYDWCAEQLRTAGYVRLANEV 405
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSS----AATNLSFIYFLQGEVEQAEKMAEEAC 193
E+ KA FL + A+ V K ++ S AATNL+F++ L+ + A+K AE A
Sbjct: 406 ELAKASKFLGNKEFESAIAVFKEFEKKGSRVRARAATNLAFLHMLEAHTDVADKYAELAL 465
Query: 194 TADTYNSAAFVNLGNCAMA-REDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+D YN+ AFVN G C +A + DY K L++ +L + C EA +N+GL + +++
Sbjct: 466 KSDRYNARAFVNKG-CVLAEKGDYEGAKSLFLESLAMEPFCFEANFNMGLVNLRMDDPQS 524
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+L F KL A++P EVL+Q+A Y+I GD+ A
Sbjct: 525 ALVFFEKLYAMLPENTEVLFQLAQCYDIMGDLNNA 559
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VNLGN ++ + + Y ALD + + N+GLA + +Y D+ + F
Sbjct: 221 VNLGNIYFEQQKFPLAIKNYRMALDQVPQTGKEVQFKIMRNIGLAFVRMGQYQDAHQTFS 280
Query: 259 KLQAIVPSMPEVLYQIASLYEITGD------------------VEQASDVN--------E 292
+ VP + Y + GD +E DV+ +
Sbjct: 281 TVMQSVPDH-QTGYNLVVCSFALGDREGMKQAFLRLLEVPPYEMEDDEDVDLLGLMGGED 339
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHS 351
+ + V+ND L + R+ ++ +CI+ SA+LI+ IE ++ GY+WC + +R + +
Sbjct: 340 DDMQNVVQNDGLREELRKRQNYITRCIVNSAQLISEKIEKAGYAAGYDWCAEQLRTAGYV 399
Query: 352 SLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFL 398
LA ++E+ KA FL + A+ V K ++ S AATNL+F++ L
Sbjct: 400 RLANEVELAKASKFLGNKEFESAIAVFKEFEKKGSRVRARAATNLAFLHML 450
>gi|428178573|gb|EKX47448.1| hypothetical protein GUITHDRAFT_106889 [Guillardia theta CCMP2712]
Length = 847
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 140/258 (54%), Gaps = 39/258 (15%)
Query: 84 LSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA-HSSLAQDLEINKA 142
L + H+E + +A+ +L +AKLIAP IE +F G+++ ++ ++ S + +A D++I+KA
Sbjct: 356 LKKAHKEYRSKAKHLVLQAAKLIAPKIEKDFVAGFDYIIEMLQKSHNYMDVASDMQISKA 415
Query: 143 VTFLRMNDVSQAVDVLKSCDEM---------TSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
+ FL+ + A D L + ++ S A TNL FIYFL+G +++A+K +A
Sbjct: 416 IYFLKQKNSKDAKDSLIAFEKQDNNEIDATTMSRAYTNLCFIYFLEGNIKEADKYGTKAI 475
Query: 194 TADTYNSAAFVNLGNCAM--------------AREDYVKGKELYVHALDNDATCIEALYN 239
+D YN+ A VN GNC M ARE + KELY+ + +A CIEA++N
Sbjct: 476 QSDRYNAKALVNKGNCEMNKAYAYEEKEKYDEAREHFTMAKELYMEGIGVEADCIEAIFN 535
Query: 240 LGLAHK---HLN-------EYSD----SLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
LGL K HL +Y +L+ F KL +I+P PE Y IA +Y+ +
Sbjct: 536 LGLCCKSMAHLEHMLQNDLDYQKNIRAALQAFEKLYSIMPDSPECNYNIAVIYDELQKTK 595
Query: 286 QASDVNENLLLEAVRNDA 303
+AS V L+ V+ DA
Sbjct: 596 KAS-VAYQRLIALVKTDA 612
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 43/235 (18%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEAL-----YNLGLAHKHLNEYSDSLECFH 258
+N+GN ++ Y ++Y ALD E L N+G A + Y D++ +
Sbjct: 229 INIGNIYFKQQKYPAAIKMYRMALDQIPHSGEHLRFKIMRNIGNAFVRMGNYQDAIMSY- 287
Query: 259 KLQAIVPSMPEVL--YQIASLYEITGDVEQASDVNENLL--------------------- 295
+A + P+ + + Y GD E+ LL
Sbjct: 288 --EASMEGKPDFQSGFNLIVCYFALGDREKMKRSFAKLLDIKDSNFGEENDDDEANEDED 345
Query: 296 --LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA-HSS 352
+ D L + H+E + +A+ +L +AKLIAP IE +F G+++ ++ ++ S +
Sbjct: 346 EDEAVMEEDELKKAHKEYRSKAKHLVLQAAKLIAPKIEKDFVAGFDYIIEMLQKSHNYMD 405
Query: 353 LAQDLEINKAVTFLRMNDVSQAVDVLKSCDEM---------TSSAATNLSFIYFL 398
+A D++I+KA+ FL+ + A D L + ++ S A TNL FIYFL
Sbjct: 406 VASDMQISKAIYFLKQKNSKDAKDSLIAFEKQDNNEIDATTMSRAYTNLCFIYFL 460
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PE++ +E+++ L+++S I + AL+ AK A+ KER L KL+EQ D NI
Sbjct: 126 PEDEARELEKKVNKLLEDSAIARSENKLQLALDLAKEAARKERQLGKLREQKQLMDQMNI 185
Query: 64 ELTFS 68
+LT++
Sbjct: 186 DLTYA 190
>gi|308494697|ref|XP_003109537.1| CRE-OSM-5 protein [Caenorhabditis remanei]
gi|308245727|gb|EFO89679.1| CRE-OSM-5 protein [Caenorhabditis remanei]
Length = 830
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 129/232 (55%), Gaps = 21/232 (9%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+ + +D L + M+ EAEK I+TS K+I+P I +++ GY WC+++++ S HS LA +
Sbjct: 343 QTLNSDMLRNWEKRMRTEAEKAIITSVKIISPVIAPDYAIGYEWCLETLKQSVHSGLAIE 402
Query: 137 LEINKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATN----LSFIY------------F 177
LE++KA ++ D+ A++VLK + D T+SAA N L F+ F
Sbjct: 403 LEMSKAGEMMKNGDIEGAIEVLKVFNAQDSKTASAAANNLCMLRFLVCDEIRKALNLSNF 462
Query: 178 LQG--EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
QG + A++ ++A D Y++ A VN GN D K Y AL NDA+C++
Sbjct: 463 QQGGRRLVDAQQYVDQALAIDRYSAHALVNQGNIYYMNGDLDKAMGNYREALSNDASCVQ 522
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
AL+N+GL K +LE F+KL I+ + +VL Q+A++YE D QA
Sbjct: 523 ALFNIGLTAKAQGSLEQALEYFYKLHGILLNNVQVLVQLAAIYESLEDSAQA 574
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN R ++ K + Y ALD + I+ L N+G+ + Y D++ F
Sbjct: 225 VNIGNIYFKRREFTKALKYYRMALDQVPSIQKDSRIKILNNIGVTFVRMGSYDDAISTFE 284
Query: 259 KLQAIVPSMPEVLYQI----------------ASLYEITG----DVEQASDVNENLLLEA 298
P+ L I L +I G + + D ++ LL +
Sbjct: 285 HCVEEQPNFSTALNLILVAFCTQDAEKMRESFVKLVDIPGFPDDEFLKEKDDDDVLLNQT 344
Query: 299 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 358
+ +D L + M+ EAEK I+TS K+I+P I +++ GY WC+++++ S HS LA +LE
Sbjct: 345 LNSDMLRNWEKRMRTEAEKAIITSVKIISPVIAPDYAIGYEWCLETLKQSVHSGLAIELE 404
Query: 359 INKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLVSSEFQ 404
++KA ++ D+ A++VLK + + S+AA NL + FLV E +
Sbjct: 405 MSKAGEMMKNGDIEGAIEVLKVFNAQDSKTASAAANNLCMLRFLVCDEIR 454
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSH 61
E EE+ ++ME +++ ++ ES + + +K AL+K K A +ER ++K +EQ G +S
Sbjct: 120 ENGEERCKQMENKVMDMLRESMMAFEKKKYKEALDKGKEAGRRERAVVKHREQQGLVESM 179
Query: 62 NIELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGY 118
N++LTF+ N+ ++ A + N+AL+ +++ K S +L N N Y
Sbjct: 180 NLDLTFTVLFNLAQQYEANDMTNEALNTYEIIVRN---KMFPNSGRLRV-----NIGNIY 231
Query: 119 ------NWCVQSIRNSAH--SSLAQDLEI----NKAVTFLRMNDVSQAVDVLKSC--DEM 164
++ R + S+ +D I N VTF+RM A+ + C ++
Sbjct: 232 FKRREFTKALKYYRMALDQVPSIQKDSRIKILNNIGVTFVRMGSYDDAISTFEHCVEEQP 291
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAE 190
S A NL + F + AEKM E
Sbjct: 292 NFSTALNLILVAFC---TQDAEKMRE 314
>gi|340058327|emb|CCC52682.1| putative intraflagellar transport protein IFT88 [Trypanosoma vivax
Y486]
Length = 785
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 131/210 (62%), Gaps = 9/210 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+L + +E + CI+T+A+LIAP IE+++ GY++ ++ +R+ A S LA +
Sbjct: 352 DDSLREKLKEDRAHFLNCIMTAARLIAPVIENDWRAGYDYLIERLRHYEMRDASSHLASE 411
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ N +A D LK+ ++ + + AATNL+++YFL+G+ + EK ++ +
Sbjct: 412 LEMCKCLHYLKHNCYKEATDGLKAFEKKDKLLRARAATNLAYLYFLEGDYDSGEKYSDMS 471
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
++ YN+ A VN GN + DY + + Y AL +A IE +YNLGL K L Y +
Sbjct: 472 LESNRYNARALVNKGNFFFMKADYERARNYYNDALAVEADNIETIYNLGLTAKRLGLYEE 531
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITG 282
+L+ F ++Q++V S EVLYQIA + ++ G
Sbjct: 532 ALKMFKRVQSLVDSH-EVLYQIADINDLVG 560
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 176/403 (43%), Gaps = 84/403 (20%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ +E+ LI+ES + A +DF ALEKAK AS KER L K +EQ G AD N
Sbjct: 131 PEEQCVEIERLTHKLIEESAMLALQKDFGGALEKAKEASKKERHLCKQREQLGLADQINA 190
Query: 64 ELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 123
+LTF+ +H + + + L + L N YN
Sbjct: 191 DLTFA------------------VHFNLAVQYQNHQLYTEAL----------NTYNLI-- 220
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVE 183
IRN + A+ L +N + N A+ + + + T SA+ L +
Sbjct: 221 -IRNLQFPNAAR-LRVNMGNIYAAQNKYLLAIKMYRMTLDETPSASKELRY--------- 269
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
K+ AFV LG A Y A+ I+A +NL L
Sbjct: 270 ---KLMRNIGN-------AFVKLGQYRDAVGSY--------EAIMEGGGDIDAGFNLLLC 311
Query: 244 HKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA 303
+ L E F K+ S E + + +N+L++ D+
Sbjct: 312 YYALGETEKMKRTFQKMLTFKTSGAET-------------DDDNDEEEKNVLVD----DS 354
Query: 304 LSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQDLEI 359
L + +E + CI+T+A+LIAP IE+++ GY++ ++ +R+ A S LA +LE+
Sbjct: 355 LREKLKEDRAHFLNCIMTAARLIAPVIENDWRAGYDYLIERLRHYEMRDASSHLASELEM 414
Query: 360 NKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
K + +L+ N +A D LK+ ++ + + AATNL+++YFL
Sbjct: 415 CKCLHYLKHNCYKEATDGLKAFEKKDKLLRARAATNLAYLYFL 457
>gi|324508953|gb|ADY43775.1| Intraflagellar transport protein 88 [Ascaris suum]
Length = 598
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 127/218 (58%), Gaps = 6/218 (2%)
Query: 76 ARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 135
A+ + ND+L Q R + AE+ IL +AK+I+ +I ++ GY WCV++I+ S ++ LA
Sbjct: 126 AQVISNDSLKQWERHRRQTAERTILIAAKIISSAIAVTYAEGYAWCVEAIKQSIYAPLAM 185
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFL----QG--EVEQAEKMA 189
+LE+NKAV LR D++ A +L + S A+ + L QG +++ A +
Sbjct: 186 ELEMNKAVELLRQGDLAAAQQILLVFNNKESKVASAAANNLALLNLLQGPTKIDDAIQYC 245
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E++ +AD YNS A VN GN D K + Y A N+A+C++ALYN+G + +
Sbjct: 246 EQSLSADRYNSNALVNRGNIFFVVGDLDKAYQYYKEAFSNEASCVQALYNMGYVCRLQGK 305
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+L+CF+KL +++ + EVL Q+A++YE D QA
Sbjct: 306 MEAALDCFYKLHSMLLNNVEVLCQLAAIYESLEDTAQA 343
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 232 TCIEALYNLGLAHKHLNEYSDSLECFH-----------KLQAI--------VPSMPEVLY 272
T I+ L N+G+A EY ++ F L I V M +
Sbjct: 43 TRIKILNNIGVAFIKCGEYDEAANTFEHCMEEKGDYGTALNLILTAYCLEDVERMKDAFQ 102
Query: 273 QIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 332
++ + + D + + + LL + + ND+L Q R + AE+ IL +AK+I+ +I
Sbjct: 103 RLVDIPLLIDDEPKYMEQEDFLLAQVISNDSLKQWERHRRQTAERTILIAAKIISSAIAV 162
Query: 333 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL 378
++ GY WCV++I+ S ++ LA +LE+NKAV LR D++ A +L
Sbjct: 163 TYAEGYAWCVEAIKQSIYAPLAMELEMNKAVELLRQGDLAAAQQIL 208
>gi|407408643|gb|EKF32001.1| intraflagellar transport protein IFT88, putative [Trypanosoma cruzi
marinkellei]
Length = 846
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 138/223 (61%), Gaps = 11/223 (4%)
Query: 69 NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN- 127
+I+ KK+ + +DAL + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+
Sbjct: 404 DIDEKKDV--LVDDALCKKIKEDRSHFLNCIMTAARLIAPVIEKDWRAGYDYLIERLRHY 461
Query: 128 ---SAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQG 180
+ S +A +LE+ K + +L+ +++D LK+ ++ + + AATNL+++YFL+G
Sbjct: 462 EMRDSTSHVASELEMCKCLYYLKHKSYKESIDGLKAFEKKDKLLRARAATNLAYLYFLEG 521
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
+ E EK ++ + ++ YN+ A VN GN + Y K K Y AL +A IEA+YNL
Sbjct: 522 DHENGEKYSDMSLESNRYNARALVNKGNFLFMKGSYEKAKVYYNDALAVEADNIEAIYNL 581
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
GL K L Y ++L+ F ++Q++V S EV+YQIA + ++ G+
Sbjct: 582 GLTAKRLGLYEEALKMFKRVQSLVDSH-EVMYQIADINDLVGN 623
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 114/226 (50%), Gaps = 34/226 (15%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCI-----EALYNLGLAHKHLNEYSDSLECFH 258
+N+GN +A+ Y+ ++Y LD T + L ++G A L +Y D++ +
Sbjct: 297 INMGNIHVAQGRYLLAIKMYRLTLDETPTASRELRHKLLRSIGNAFVKLGQYRDAVASY- 355
Query: 259 KLQAIVPSMPEV--LYQIASLYEITGDVEQASDVNENLL----------------LEAVR 300
+AI+ +V + + Y G+ E+ + LL + +
Sbjct: 356 --EAILEGNGDVNAGFNLLLCYYALGEPEKMKRTFQKLLNCKPVGIEDEEDIDEKKDVLV 413
Query: 301 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 356
+DAL + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S +A +
Sbjct: 414 DDALCKKIKEDRSHFLNCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSTSHVASE 473
Query: 357 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
LE+ K + +L+ +++D LK+ ++ + + AATNL+++YFL
Sbjct: 474 LEMCKCLYYLKHKSYKESIDGLKAFEKKDKLLRARAATNLAYLYFL 519
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ +E+ I LI+ES + A +D+ ALEKAK AS KER L K +EQ G AD N
Sbjct: 194 PEEQCAEVEKLIHKLIEESAMLALQKDYGGALEKAKEASKKERQLCKQREQLGLADQINA 253
Query: 64 ELTFS 68
+LT++
Sbjct: 254 DLTYA 258
>gi|407847902|gb|EKG03465.1| intraflagellar transport protein IFT88, putative [Trypanosoma
cruzi]
Length = 784
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 131/211 (62%), Gaps = 9/211 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+DAL + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S +A +
Sbjct: 352 DDALCKKIKEDRSHFLNCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSTSHVASE 411
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ +++D LK+ ++ + + AATNL+++YFL+G+ E EK ++ +
Sbjct: 412 LEMCKCLYYLKHKSYKESIDGLKAFEKKDKLLRARAATNLAYLYFLEGDHENGEKYSDMS 471
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
++ YN+ A VN GN + Y K K Y AL +A IEA+YNLGL K L Y +
Sbjct: 472 LESNRYNARALVNKGNFLFMKGSYEKAKVYYNDALAVEADNIEAIYNLGLTAKRLGLYEE 531
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
+L+ F ++Q++V S EV+YQIA + ++ G+
Sbjct: 532 ALKMFKRVQSLVDSH-EVMYQIADINDLVGN 561
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 113/226 (50%), Gaps = 34/226 (15%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN-----LGLAHKHLNEYSDSLECFH 258
+N+GN +A+ Y+ ++Y LD T L + +G A L +Y D++ +
Sbjct: 235 INMGNIHVAQGRYLLAIKMYRLTLDETPTASRELRHRLLRSIGNAFVKLGQYRDAVASY- 293
Query: 259 KLQAIVPSMPEV--LYQIASLYEITGDVEQASDVNENLL----------------LEAVR 300
+AI+ +V + + Y G+ E+ + LL + +
Sbjct: 294 --EAIMEGNGDVNAGFNLLLCYYALGEPEKMKRTFQKLLNCKPVGIEDEDDIDEKKDVLV 351
Query: 301 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 356
+DAL + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S +A +
Sbjct: 352 DDALCKKIKEDRSHFLNCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSTSHVASE 411
Query: 357 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
LE+ K + +L+ +++D LK+ ++ + + AATNL+++YFL
Sbjct: 412 LEMCKCLYYLKHKSYKESIDGLKAFEKKDKLLRARAATNLAYLYFL 457
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ +E+ I LI+ES + A +D+ +ALEKAK AS KER L K +EQ G AD N
Sbjct: 132 PEEQCAEVEKLIHKLIEESAMLALQKDYGSALEKAKEASKKERQLCKQREQLGLADQINA 191
Query: 64 ELTFS 68
+LT++
Sbjct: 192 DLTYA 196
>gi|32401058|gb|AAP80732.1|AF521959_1 putative intraflagellar transport protein IFT88 [Trypanosoma
brucei]
Length = 400
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 127/205 (61%), Gaps = 9/205 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+L + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S LA +
Sbjct: 81 DDSLREKIKEERTHFLYCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSSSHLASE 140
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ N +A + LK+ ++ + + AATNL+++YFL+G+ E E+ ++ +
Sbjct: 141 LEMCKCLYYLKHNSYKEATEGLKAFEKKDKLLRARAATNLAYLYFLEGDYESGERYSDMS 200
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ YN+ A VN GN + DY K + Y AL +A IEA+YNLGL K L Y +
Sbjct: 201 LEANRYNARALVNKGNFFFIKADYEKAQTYYNDALAVEADNIEAIYNLGLTAKRLGLYEE 260
Query: 253 SLECFHKLQAIVPSMPEVLYQIASL 277
+L+ F + Q++V S E++YQIA +
Sbjct: 261 ALKMFKRGQSLVDS-HEIVYQIADI 284
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 67/106 (63%), Gaps = 8/106 (7%)
Query: 301 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 356
+D+L + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S LA +
Sbjct: 81 DDSLREKIKEERTHFLYCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSSSHLASE 140
Query: 357 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
LE+ K + +L+ N +A + LK+ ++ + + AATNL+++YFL
Sbjct: 141 LEMCKCLYYLKHNSYKEATEGLKAFEKKDKLLRARAATNLAYLYFL 186
>gi|71754697|ref|XP_828263.1| intraflagellar transport protein IFT88 [Trypanosoma brucei TREU927]
gi|70833649|gb|EAN79151.1| intraflagellar transport protein IFT88, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 800
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 129/209 (61%), Gaps = 9/209 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+L + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S LA +
Sbjct: 358 DDSLREKIKEERTHFLYCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSSSHLASE 417
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ N +A + LK+ ++ + + AATNL+++YFL+G+ E E+ ++ +
Sbjct: 418 LEMCKCLYYLKHNSYKEATEGLKAFEKKDKLLRARAATNLAYLYFLEGDYESGERYSDMS 477
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ YN+ A VN GN + DY K + Y AL +A IEA+YNLGL K L Y +
Sbjct: 478 LEANRYNARALVNKGNFFFIKADYEKARTYYNDALAVEADNIEAIYNLGLTAKRLGLYEE 537
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEIT 281
+L+ F + Q++V S E++YQIA + ++
Sbjct: 538 ALKMFKRGQSLVDSH-EIVYQIADISDLV 565
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 171/404 (42%), Gaps = 86/404 (21%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ +E+ LI+ES + A +D+ ALEKAK A KER L K +E G AD N
Sbjct: 137 PEEQCVEIEKMTHKLIEESAVLALRKDYGGALEKAKEAGKKERFLCKQRENLGLADQINS 196
Query: 64 ELTFSNINRKKNARAVR-NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCV 122
+LT+ AV N A+ + +M EA N YN +
Sbjct: 197 DLTY----------AVHFNLAVQYQNHQMYTEA-------------------LNTYNLII 227
Query: 123 QSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEV 182
+++ A L +N + N A+ + + + T SA+ L +
Sbjct: 228 RNL----QFPYASRLRVNMGNIYAAQNKYLLAIKMYRMTLDETPSASKELRY-------- 275
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
K+ AFV LG A Y A+ I+A +NL L
Sbjct: 276 ----KLMRNVGN-------AFVKLGQYRDAVSSY--------EAIMEGNGDIDAAFNLLL 316
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND 302
+ L E F K+ + ++ E DV + +D
Sbjct: 317 CYYALGETERMKRTFQKM---------LTFKTLGAEGEDEIEEGEKDV--------LVDD 359
Query: 303 ALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQDLE 358
+L + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S LA +LE
Sbjct: 360 SLREKIKEERTHFLYCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSSSHLASELE 419
Query: 359 INKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
+ K + +L+ N +A + LK+ ++ + + AATNL+++YFL
Sbjct: 420 MCKCLYYLKHNSYKEATEGLKAFEKKDKLLRARAATNLAYLYFL 463
>gi|261334077|emb|CBH17071.1| intraflagellar transport protein IFT88, putative [Trypanosoma
brucei gambiense DAL972]
Length = 800
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 128/209 (61%), Gaps = 9/209 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+L + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S LA +
Sbjct: 358 DDSLREKIKEERTHFLYCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSSSHLASE 417
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ N +A + LK+ ++ + + AATNL+++YFL+G+ E E+ ++ +
Sbjct: 418 LEMCKCLYYLKHNSYKEATEGLKAFEKKDKLLRARAATNLAYLYFLEGDYESGERYSDMS 477
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ YN+ A VN GN + DY K + Y AL +A IEA+YNLGL K L Y +
Sbjct: 478 LEANRYNARALVNKGNFFFIKADYEKARTYYNDALAVEADNIEAIYNLGLTAKRLGLYEE 537
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEIT 281
+L+ F + Q +V S E++YQIA + ++
Sbjct: 538 ALKMFKRGQLLVDSH-EIVYQIADISDLV 565
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 171/404 (42%), Gaps = 86/404 (21%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ +E+ LI+ES + A +D+ ALEKAK A KER L K +E G AD N
Sbjct: 137 PEEQCVEIEKMTHKLIEESAVLALRKDYGGALEKAKEAGKKERFLCKQRENLGLADQINS 196
Query: 64 ELTFSNINRKKNARAVR-NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCV 122
+LT+ AV N A+ + +M EA N YN +
Sbjct: 197 DLTY----------AVHFNLAVQYQNHQMYTEA-------------------LNTYNLII 227
Query: 123 QSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEV 182
+++ A L +N + N A+ + + + T SA+ L +
Sbjct: 228 RNL----QFPYASRLRVNMGNIYAAQNKYLLAIKMYRMTLDETPSASKELRY-------- 275
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
K+ AFV LG A Y A+ I+A +NL L
Sbjct: 276 ----KLMRNVGN-------AFVKLGQYRDAVSSY--------EAIMEGNGDIDAAFNLLL 316
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND 302
+ L E F K+ + ++ E DV + +D
Sbjct: 317 CYYALGETERMKRTFQKM---------LTFKTLGAEGEDEIEEGEKDV--------LVDD 359
Query: 303 ALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQDLE 358
+L + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S LA +LE
Sbjct: 360 SLREKIKEERTHFLYCIMTAARLIAPVIEKDWRAGYDYLIERLRHYEMRDSSSHLASELE 419
Query: 359 INKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
+ K + +L+ N +A + LK+ ++ + + AATNL+++YFL
Sbjct: 420 MCKCLYYLKHNSYKEATEGLKAFEKKDKLLRARAATNLAYLYFL 463
>gi|123975181|ref|XP_001330228.1| TPR Domain containing protein [Trichomonas vaginalis G3]
gi|121896222|gb|EAY01380.1| TPR Domain containing protein [Trichomonas vaginalis G3]
Length = 705
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 116/202 (57%), Gaps = 5/202 (2%)
Query: 85 SQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVT 144
+QLH E + + +LTS +L+A + ++ Y++ +Q ++ S + EI ++
Sbjct: 263 NQLHVERREQVRLVMLTS-RLVASKSDKDWQEAYDFVLQRLKQSKFPEATGEFEIAYSLA 321
Query: 145 FLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNS 200
L + +A+++L+ + + + AATNLSF+Y+L+ + E A K A+ A D YN+
Sbjct: 322 HLNHRNADKAIEILRQIRKKDPALMALAATNLSFLYYLEQDYENANKYAQMALDHDKYNA 381
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
A VN GNC M + ++ Y+ A+ +A C+EALYNLG+ K + +Y ++L+ F KL
Sbjct: 382 QALVNKGNCLMQSNHEDEARDQYLEAIGVEADCVEALYNLGVVSKMMGQYEEALQVFEKL 441
Query: 261 QAIVPSMPEVLYQIASLYEITG 282
I+P PEV ++I+ YE G
Sbjct: 442 NRIIPKAPEVAFEISDCYEKAG 463
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 202 AFVNLGNCAMA---REDYVKGKELYVHALDNDATCIEALYN--LGLAHKHLNEYSDSLEC 256
A++ +GN MA ED VK + ++ L + +A +N G+A L +Y +L
Sbjct: 147 AYLEIGNINMALGKYEDAVKNYNMGINYLKPEHNRFKARFNHACGVAQICLGQYHLALSS 206
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAV-------RNDALS-QL 307
F + PS+ + + + + I E + + LL ++ V +D L QL
Sbjct: 207 FETAMRVDPSI-KTGFNLVLCHAILSSTEDMREAYKGLLGVKPVTTISDLQESDVLGNQL 265
Query: 308 HREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLR 367
H E + + +LTS +L+A + ++ Y++ +Q ++ S + EI ++ L
Sbjct: 266 HVERREQVRLVMLTS-RLVASKSDKDWQEAYDFVLQRLKQSKFPEATGEFEIAYSLAHLN 324
Query: 368 MNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
+ +A+++L+ + + + AATNLSF+Y+L
Sbjct: 325 HRNADKAIEILRQIRKKDPALMALAATNLSFLYYL 359
>gi|123498307|ref|XP_001327376.1| TPR Domain containing protein [Trichomonas vaginalis G3]
gi|121910304|gb|EAY15153.1| TPR Domain containing protein [Trichomonas vaginalis G3]
Length = 723
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 85 SQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVT 144
+QLH E + E + ++ +++L+A + ++ Y++ +Q ++ S + EI ++
Sbjct: 281 NQLHVE-RREQVRLVMLASRLVASKTDKDWQEAYDYVLQKLKQSKFPEATGEFEIAYSLA 339
Query: 145 FLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNS 200
L ++ +A+++L+ + + + AATNLSF+Y+L+ + E A+K A+ A D YN+
Sbjct: 340 HLNHHNADKAIEMLRQIRKKDPALMALAATNLSFLYYLEQDYENADKYAQMALDHDKYNA 399
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
A VN GNC M + ++ Y+ A+ +A C+EALYNLG+ K +Y ++L+ F KL
Sbjct: 400 QALVNKGNCLMQSNHEEEARDQYLEAIGVEADCVEALYNLGVVSKMTGQYDEALQVFEKL 459
Query: 261 QAIVPSMPEVLYQIASLYEITG 282
I+P PEV ++I+ YE G
Sbjct: 460 NRIIPKAPEVAFEISDCYEKAG 481
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 203 FVNLGNCAM---AREDYVKGKELYVHALDNDATCIEALYN--LGLAHKHLNEYSDSLECF 257
++ +GN M ED VK + ++ L + + +A +N G+A L +Y+ +L F
Sbjct: 166 YLEIGNINMILGKYEDAVKNYNMGINYLKPEHSRYKARFNHACGVAQICLGQYTQALSAF 225
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL--------EAVRNDALS-QLH 308
+ PS+ + Y + + + ++ D + LL + +D L QLH
Sbjct: 226 ETAMRLDPSI-KTGYNLVLCHALLSSTDEVRDAYKGLLGVKPITTIGDISESDILGNQLH 284
Query: 309 REMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRM 368
E + E + ++ +++L+A + ++ Y++ +Q ++ S + EI ++ L
Sbjct: 285 VE-RREQVRLVMLASRLVASKTDKDWQEAYDYVLQKLKQSKFPEATGEFEIAYSLAHLNH 343
Query: 369 NDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
++ +A+++L+ + + + AATNLSF+Y+L
Sbjct: 344 HNADKAIEMLRQIRKKDPALMALAATNLSFLYYL 377
>gi|342185286|emb|CCC94769.1| putative intraflagellar transport protein IFT88, partial
[Trypanosoma congolense IL3000]
Length = 796
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 125/205 (60%), Gaps = 9/205 (4%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SAHSSLAQD 136
+D+L + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ + S LA +
Sbjct: 360 DDSLREKIKEDRSHFLYCIMTAARLIAPVIEKDWRVGYDYLIERLRHYEMRDSSSHLASE 419
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
LE+ K + +L+ N +A + LK+ ++ + + AATNL+++YFL+G+ + EK ++ +
Sbjct: 420 LEMCKCLYYLKHNSYKEATEGLKAFEKKDKLLRARAATNLAYLYFLEGDYDSGEKYSDMS 479
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
++ YN+ A VN GN + DY K + Y AL +A IE +YNLGL K L Y +
Sbjct: 480 LESNRYNARALVNKGNFFFMKGDYEKARNYYNDALAVEADNIEGIYNLGLTAKRLGLYEE 539
Query: 253 SLECFHKLQAIVPSMPEVLYQIASL 277
+L+ F + Q +V S E++YQIA +
Sbjct: 540 ALKTFKRGQLLVDSH-EIVYQIADI 563
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%), Gaps = 35/233 (15%)
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY-----NLGLAHKHLNEYSD 252
Y S VN+GN A+ Y+ ++Y LD + + L N+G A L +Y D
Sbjct: 236 YASRLRVNMGNIYAAQNKYLLAIKMYRMTLDETPSASKELRYKLMRNIGNAFVKLGQYRD 295
Query: 253 SLECFHKLQAIVPSMPEV--LYQIASLYEITGDVEQASDVNENLLL-------------- 296
++ + +AI+ +V + + Y G+ E+ + +L
Sbjct: 296 AVSSY---EAIMEGNGDVDAAFNLLLCYYALGETERMKRTFQKMLTFKTSGTDDDEDAEE 352
Query: 297 ---EAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN----SA 349
+ + +D+L + +E + CI+T+A+LIAP IE ++ GY++ ++ +R+ +
Sbjct: 353 GEKDVLVDDSLREKIKEDRSHFLYCIMTAARLIAPVIEKDWRVGYDYLIERLRHYEMRDS 412
Query: 350 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
S LA +LE+ K + +L+ N +A + LK+ ++ + + AATNL+++YFL
Sbjct: 413 SSHLASELEMCKCLYYLKHNSYKEATEGLKAFEKKDKLLRARAATNLAYLYFL 465
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE +E+ LI+ES + A +D+ ALEKAK A KER L K +EQ G AD N
Sbjct: 139 PEELCVEIEKLTHKLIEESAMLALRKDYGGALEKAKEAGKKERYLCKQREQLGLADQINS 198
Query: 64 ELTFS 68
+LT++
Sbjct: 199 DLTYA 203
>gi|47221980|emb|CAG08235.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 123/226 (54%), Gaps = 33/226 (14%)
Query: 206 LGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFHKL 260
+ N + +++Y + +LY ALD ++ + N GL + +Y ++ F +
Sbjct: 1 MANIYVKQQNYREAIKLYQKALDQIPNTYKEMKMKIMENFGLFFVRIGQYPKAIIYFEDV 60
Query: 261 QAIVPSMPEVLYQIASLYEITGDVEQAS-----------------------DVNENLLLE 297
+ P+ + Y + Y GD E+ D + ++ +E
Sbjct: 61 MSQRPNT-KTGYNLVLCYYAIGDKERMKKGFQKLISVPLGFDEDKYIPSNDDGSTDMFIE 119
Query: 298 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 357
A++ND L Q+ R +K +EK I+T+AKLIAP+IE +F+ G++WCV +++S ++ LA DL
Sbjct: 120 AIQNDKLHQMERNLKQRSEKYIMTAAKLIAPAIETSFAAGFDWCVDVVKSSQYTELADDL 179
Query: 358 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLV 399
EI KAVT+LR D +QAV+ LK+ ++ S+A TNLSF+YFL+
Sbjct: 180 EIIKAVTYLRQKDFNQAVETLKTFEKKDTRAKSTAGTNLSFLYFLL 225
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ R +K +EK I+T+AKLIAP+IE +F+ G++WCV +++S ++ LA DL
Sbjct: 120 AIQNDKLHQMERNLKQRSEKYIMTAAKLIAPAIETSFAAGFDWCVDVVKSSQYTELADDL 179
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQ-AEKMAEEA 192
EI KAVT+LR D +QAV+ LK+ ++ S+A TNLSF+YFL E Q A +
Sbjct: 180 EIIKAVTYLRQKDFNQAVETLKTFEKKDTRAKSTAGTNLSFLYFLLLEDPQRAIQWLMHI 239
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+ + + LG D + Y + + I + LG + +
Sbjct: 240 ISVSPTDCSVLAKLGQLFDDEGDESQALHYYTESFRHFPCDISVIAWLGTYYFKKQYFEK 299
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+++ F + I P+ E ++A Y +G+ A
Sbjct: 300 AIKYFERATLIQPNEVEWRLRVAGCYRRSGNYHAA 334
>gi|303279024|ref|XP_003058805.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459965|gb|EEH57260.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 669
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 116/215 (53%), Gaps = 8/215 (3%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDN-FSNGYNWCVQSIRNSAHSSLAQDLEI 139
D L++ R + + + IL +AKLI +I GY + + ++ LA +LE+
Sbjct: 282 GDELTRYLRTQQLDCHRKILAAAKLIGTTIGGGSLERGYEYLADEMHRFGYAILANELEM 341
Query: 140 NKAVTFLRMN-------DVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
A++ L+ + ++ K + + AATNLS++YF +G+ E A+K A+ +
Sbjct: 342 ELALSHLKSKTPEGMKEGKRRLLEFEKKEHALKAKAATNLSWLYFHEGDYENAQKYADLS 401
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
D Y++ A VN GNC + R D ++L++ A+ A C EA+YNLGLA+ L Y D
Sbjct: 402 VATDRYDARALVNKGNCHLQRGDLEGARDLFLEAVGVQADCHEAIYNLGLAYIKLGAYED 461
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+L F K+ A+ P EVLYQ+ ++ ++ GD A
Sbjct: 462 ALAAFRKVHAMTPDNAEVLYQLGNVSDMLGDFPAA 496
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 33/226 (14%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDN-----DATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+G R ++ ++Y ALD+ + + N+G+A + +Y D+ F
Sbjct: 162 VNMGKVYFDRGEFPSAIKMYRMALDHISHEQKGVRFKVMRNIGIAFVKMGQYVDAARAFS 221
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVR----------------- 300
+ ++ P Y + + TGD E+ + LL L A
Sbjct: 222 DVMSVEPDFTSG-YNLVICHYATGDKEKMKESFVKLLSLRAFEPEDEEEEDDEEKEDDDT 280
Query: 301 -NDALSQLHREMKHEAEKCILTSAKLIAPSIEDN-FSNGYNWCVQSIRNSAHSSLAQDLE 358
D L++ R + + + IL +AKLI +I GY + + ++ LA +LE
Sbjct: 281 VGDELTRYLRTQQLDCHRKILAAAKLIGTTIGGGSLERGYEYLADEMHRFGYAILANELE 340
Query: 359 INKAVTFLRMN-------DVSQAVDVLKSCDEMTSSAATNLSFIYF 397
+ A++ L+ + ++ K + + AATNLS++YF
Sbjct: 341 MELALSHLKSKTPEGMKEGKRRLLEFEKKEHALKAKAATNLSWLYF 386
>gi|432119990|gb|ELK38669.1| Intraflagellar transport protein 88 like protein [Myotis davidii]
Length = 705
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 96/179 (53%), Gaps = 33/179 (18%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE CV+ ++ S + LA DL
Sbjct: 416 AIKNDHLRQMERE-----------------------------RCVEVVKASQYVELANDL 446
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
EINKA+T+LR D +QA++ LK ++ + S+AATNLSF+Y+L+ + QA A+ A
Sbjct: 447 EINKAITYLRQKDFNQAIETLKMFEKKDSRVKSAAATNLSFLYYLENDFAQASSYADLAV 506
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+D YN +A N GN A DY K E Y AL ND++C EALYN+G K L+ Y D
Sbjct: 507 NSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGNYQKALDTYKD 565
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 63/228 (27%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 294 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFE 353
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ ++ P++ I S + + GD E+ + D + NL
Sbjct: 354 HIMSMAPNLKAGFNLILSYFAV-GDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNL 412
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE CV+ ++ S + LA
Sbjct: 413 VIEAIKNDHLRQMERE-----------------------------RCVEVVKASQYVELA 443
Query: 355 QDLEINKAVTFLRMNDVSQAVDVLKSCDE----MTSSAATNLSFIYFL 398
DLEINKA+T+LR D +QA++ LK ++ + S+AATNLSF+Y+L
Sbjct: 444 NDLEINKAITYLRQKDFNQAIETLKMFEKKDSRVKSAAATNLSFLYYL 491
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 191 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINL 250
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSN---- 116
+LT+S N+ + +A + +AL+ +K+ K + + +L N N
Sbjct: 251 DLTYSVLFNLASQYSANEMYAEALNTYQVIVKN---KMFINAGRLKV-----NMGNIYLK 302
Query: 117 --GYNWCVQSIR------NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS- 167
Y+ ++ R S H + + N VTF++ S A++ + M +
Sbjct: 303 QRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNL 362
Query: 168 -AATNLSFIYFLQGEVEQAEK 187
A NL YF G+ E+ +K
Sbjct: 363 KAGFNLILSYFAVGDREKMKK 383
>gi|108743669|gb|ABG02143.1| IP03331p [Drosophila melanogaster]
Length = 770
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ E ++ ++ I LI+P IEDN+++GYNWC++ I+ S + LA +
Sbjct: 322 QALKKDELAVYRNERRNAVKRSITMIVDLISPFIEDNYNDGYNWCIEIIKTSNLAWLANE 381
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCDE-----MTSSAATNLSFIYFLQGEVEQAEKMAEE 191
LE+NKA+ +LR NDV QA++ L+ D MT+SA TNLSFIY G +E A +
Sbjct: 382 LELNKALVYLRQNDVHQAIETLQMYDRKSEGSMTASALTNLSFIYISLGNLEMASHCVNQ 441
Query: 192 ACTADTY--NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
+ N+ +N G + + + E + AL EA YNLGL N+
Sbjct: 442 LHEIGSLKNNAPGLINAGIVELGSHNLILASERFEGALQLQPMNFEARYNLGLVALAQND 501
Query: 250 YSDSLECFHKL--QAIVPSMPE---VLYQIASLYE 279
Y + E F L Q ++PS + V YQ+A L E
Sbjct: 502 YELAEERFELLKEQLMLPSSVQHSHVFYQLAKLQE 536
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 188/425 (44%), Gaps = 70/425 (16%)
Query: 4 PEEKFERMEQEIIGLIDESCICAR--------NQDFK--AALEKAKLASNKERVLIKLQE 53
P+ K++ +E++I+ L++ S + A N D K AL KAK A + +R L + ++
Sbjct: 40 PQMKYKNLEEKIVKLLESSIVLAWQGSPNKLLNLDTKLAEALSKAKEAFSLDRTLHQFRD 99
Query: 54 QFGHADSHNIELTFSNINRKKNARAVRNDALSQLHR-EMKHEA--EKCILTSAKLIAPSI 110
Q G HN +LT+ AV + Q R EM EA I+ K+
Sbjct: 100 QHGENVYHNFDLTY----------AVFFNLAEQYERSEMHIEALNTYSIMAKNKMFPHVN 149
Query: 111 EDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVD-VLKSCDEMTSSAA 169
+ + G + I KAV RM A+D V KS ++
Sbjct: 150 QLKLNMGNIYYSMGI-------------YQKAVKMYRM-----ALDSVPKSLSQLRLKIR 191
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN 229
N+ ++ G A E T + N + ++L C A D K K + D
Sbjct: 192 ENIGILFIRMGSYSDAASSFEFIMT-ERANIRSSIHLLLCYFALGDVEKVKLAFRRLCDV 250
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDV---EQ 286
IE+ + ++ ++ + + I YQ + +TG V E
Sbjct: 251 QTEAIES---------DMESETNIIKLQQQAEPIQQIGETDGYQSLNNEPVTGSVIKAEG 301
Query: 287 ASDVNENL----------LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSN 336
+NE + +++A++ D L+ E ++ ++ I LI+P IEDN+++
Sbjct: 302 GGKLNETVKFAATVKHRYVVQALKKDELAVYRNERRNAVKRSITMIVDLISPFIEDNYND 361
Query: 337 GYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE-----MTSSAATN 391
GYNWC++ I+ S + LA +LE+NKA+ +LR NDV QA++ L+ D MT+SA TN
Sbjct: 362 GYNWCIEIIKTSNLAWLANELELNKALVYLRQNDVHQAIETLQMYDRKSEGSMTASALTN 421
Query: 392 LSFIY 396
LSFIY
Sbjct: 422 LSFIY 426
>gi|195475890|ref|XP_002090216.1| GE12986 [Drosophila yakuba]
gi|194176317|gb|EDW89928.1| GE12986 [Drosophila yakuba]
Length = 872
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 119/217 (54%), Gaps = 16/217 (7%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ E ++ +K I LI+P IEDN+++GYNWC++ I+ S + LA +
Sbjct: 395 QALKKDELAIYTNERRNTVKKSITMIVDLISPFIEDNYNDGYNWCIEIIKTSNLAWLANE 454
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQA----EK 187
LE+NKA+ +LR NDV+QA+ L KS MT+SA TNLSFIY +E A +
Sbjct: 455 LELNKALVYLRQNDVNQAIITLQMYDRKSEGSMTASALTNLSFIYISLSNLEMAYHCVNQ 514
Query: 188 MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHL 247
+ E + N+ +N G + + +E + AL T EA+YNLGL
Sbjct: 515 LQEIGSLKN--NAPGLINAGIVELGSHKLILARERFERALQLQPTNFEAMYNLGLVALAQ 572
Query: 248 NEYSDSLECFHKLQA--IVPSMPE---VLYQIASLYE 279
N++ + E F L+A ++PS + V YQ+A L E
Sbjct: 573 NDFKLAEERFEMLKAQLMMPSSVQHSHVFYQLAKLQE 609
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+++A++ D L+ E ++ +K I LI+P IEDN+++GYNWC++ I+ S + LA
Sbjct: 393 VVQALKKDELAIYTNERRNTVKKSITMIVDLISPFIEDNYNDGYNWCIEIIKTSNLAWLA 452
Query: 355 QDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLVS 400
+LE+NKA+ +LR NDV+QA+ L KS MT+SA TNLSFIY +S
Sbjct: 453 NELELNKALVYLRQNDVNQAIITLQMYDRKSEGSMTASALTNLSFIYISLS 503
>gi|61968013|gb|AAX56966.1| intraflagellar transport protein 88 [Danio rerio]
Length = 396
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 30/199 (15%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFH 258
VN+ N +++Y K + Y ALD ++A I+ + ++G+ H+ +YSD++ F
Sbjct: 199 VNMANIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQDIGVVFIHMGQYSDAITSFE 258
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQAS------------------------DVNENL 294
+ P++ I Y I GD E+ D + N+
Sbjct: 259 YIMTESPNIKTGFNLILCYYAI-GDRERMKKASQKLICVPLGVDDDDKYIPPNDDPHANM 317
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
++EA++ND L Q+ RE K AEK I+TSAKLIAP+IE +F+ G++WCV ++ S + LA
Sbjct: 318 VIEAIKNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELA 377
Query: 355 QDLEINKAVTFLRMNDVSQ 373
DLEINKA+T+LR D Q
Sbjct: 378 NDLEINKAITYLRQRDFKQ 396
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 137
A++ND L Q+ RE K AEK I+TSAKLIAP+IE +F+ G++WCV ++ S + LA DL
Sbjct: 321 AIKNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELANDL 380
Query: 138 EINKAVTFLRMNDVSQ 153
EINKA+T+LR D Q
Sbjct: 381 EINKAITYLRQRDFKQ 396
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E+++ LI++SC+ D + +LEKAK A KER L++ +EQ G AD N+
Sbjct: 96 PEEKIKILEKKVNDLIEDSCLAHARGDLQVSLEKAKEAGRKERALVRQREQTGTADHINL 155
Query: 64 ELTFSNINRKKNARAVRNDALSQ--------LHREMKHEAEKCILTSAKLIAPSIEDNFS 115
+LT+S + N A ND ++ + +M + A + + A + + N++
Sbjct: 156 DLTYSVLFNLANQYA-NNDMYTEALNTYQVIVKNKMFNNAGRLKVNMANIYFK--QKNYT 212
Query: 116 NG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSA---- 168
Y + I N AH+++ + + V F+ M S A+ + MT S
Sbjct: 213 KAIKFYRMALDQISN-AHNAMRIKIMQDIGVVFIHMGQYSDAITSFEYI--MTESPNIKT 269
Query: 169 ATNLSFIYFLQGEVEQAEKMAEE 191
NL Y+ G+ E+ +K +++
Sbjct: 270 GFNLILCYYAIGDRERMKKASQK 292
>gi|281365345|ref|NP_523613.4| no mechanoreceptor potential B, isoform C [Drosophila melanogaster]
gi|272407136|gb|AAF57219.4| no mechanoreceptor potential B, isoform C [Drosophila melanogaster]
Length = 840
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ E ++ ++ I LI+P IEDN+++GYNWC++ I+ S + LA +
Sbjct: 392 QALKKDELAVYRNERRNAVKRSITMIVDLISPFIEDNYNDGYNWCIEIIKTSNLAWLANE 451
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEE 191
LE+NKA+ +LR NDV QA++ L KS MT+SA TNLSFIY G +E A +
Sbjct: 452 LELNKALVYLRQNDVHQAIETLQMYDRKSEGSMTASALTNLSFIYISLGNLEMASHCVNQ 511
Query: 192 ACTADTY--NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
+ N+ +N G + + + E + AL EA YNLGL N+
Sbjct: 512 LHEIGSLKNNAPGLINAGIVELGSHNLILASERFEGALQLQPMNFEARYNLGLVALAQND 571
Query: 250 YSDSLECFHKL--QAIVPSMPE---VLYQIASLYE 279
Y + E F L Q ++PS + V YQ+A L E
Sbjct: 572 YELAEERFELLKEQLMLPSSVQHSHVFYQLAKLQE 606
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 194/437 (44%), Gaps = 94/437 (21%)
Query: 4 PEEKFERMEQEIIGLIDESCICAR--------NQDFK--AALEKAKLASNKERVLIKLQE 53
P+ K++ +E++I+ L++ S + A N D K AL KAK A + +R L + ++
Sbjct: 110 PQMKYKNLEEKIVKLLESSIVLAWQGSPNKLLNLDTKLAEALSKAKEAFSLDRTLHQFRD 169
Query: 54 QFGHADSHNIELTFSNINRKKNARAVRNDALSQLHR-EMKHEA--EKCILTSAKLIAPSI 110
Q G HN +LT+ AV + Q R EM EA I+ K+ P +
Sbjct: 170 QHGENVYHNFDLTY----------AVFFNLAEQYERSEMHIEALNTYSIMAKNKMF-PHV 218
Query: 111 ED--------NFSNG-YNWCVQSIR---NSAHSSLAQ-DLEI--NKAVTFLRMNDVSQAV 155
+S G Y V+ R +S SL+Q L+I N + F+RM S A
Sbjct: 219 NQLKLNMGNIYYSMGIYQKAVKMYRMALDSVPKSLSQLRLKIRENIGILFIRMGSYSDAA 278
Query: 156 DVLKSCDEMTSSA----ATNLSFIYFLQGEVEQAE-------KMAEEACTADTYNSAAFV 204
+ MT A + +L YF G+VE+ + + EA +D + +
Sbjct: 279 SSFEFI--MTERANIRSSIHLLLCYFALGDVEKVKLAFRRLCDVQTEAIESDMESETNII 336
Query: 205 NLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
L A + G+ +L+N+ + G LNE
Sbjct: 337 KLQQQAEPIQQI--GETDGYQSLNNEPVTGSVIKAEG--GGKLNE--------------- 377
Query: 265 PSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAK 324
V+ A+ V +++A++ D L+ E ++ ++ I
Sbjct: 378 ------------------TVKFAATVKHRYVVQALKKDELAVYRNERRNAVKRSITMIVD 419
Query: 325 LIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----K 379
LI+P IEDN+++GYNWC++ I+ S + LA +LE+NKA+ +LR NDV QA++ L K
Sbjct: 420 LISPFIEDNYNDGYNWCIEIIKTSNLAWLANELELNKALVYLRQNDVHQAIETLQMYDRK 479
Query: 380 SCDEMTSSAATNLSFIY 396
S MT+SA TNLSFIY
Sbjct: 480 SEGSMTASALTNLSFIY 496
>gi|195161749|ref|XP_002021724.1| GL26355 [Drosophila persimilis]
gi|194103524|gb|EDW25567.1| GL26355 [Drosophila persimilis]
Length = 885
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 14/216 (6%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ ++ ++ ++ I LI+P IE+N+++GYNWC++ I+ S S LA +
Sbjct: 399 QALKTDELALYTKQKRNAEKRSITMIVDLISPIIEENYNDGYNWCIEIIKTSNLSWLANE 458
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAE---KM 188
LE+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY G +E A
Sbjct: 459 LELNKALVYLRQNDVNQAIETLQMYDRKSEGSMTASALTNLSFIYISLGNLEMASHCLNQ 518
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
++ +T N+ A +N G M +++ ++ + AL T EA YNLGL
Sbjct: 519 LQDIGALET-NALALINAGIVDMQKQNLSSARDRFERALQLQPTSFEANYNLGLVALAQQ 577
Query: 249 EYSDSLECFH--KLQAIVPSMPE---VLYQIASLYE 279
++ + E F K Q +VP + V YQ+A L E
Sbjct: 578 DFQQAEEQFELLKAQLMVPHSVQHSHVYYQLAKLQE 613
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+L+A++ D L+ ++ ++ ++ I LI+P IE+N+++GYNWC++ I+ S S LA
Sbjct: 397 VLQALKTDELALYTKQKRNAEKRSITMIVDLISPIIEENYNDGYNWCIEIIKTSNLSWLA 456
Query: 355 QDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYF 397
+LE+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY
Sbjct: 457 NELELNKALVYLRQNDVNQAIETLQMYDRKSEGSMTASALTNLSFIYI 504
>gi|198472879|ref|XP_002133132.1| GA28827 [Drosophila pseudoobscura pseudoobscura]
gi|198139203|gb|EDY70534.1| GA28827 [Drosophila pseudoobscura pseudoobscura]
Length = 885
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 14/216 (6%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ ++ ++ ++ I LI+P IE+N+++GYNWC++ I+ S S LA +
Sbjct: 399 QALKTDELALYTKQKRNAEKRSITMIVDLISPIIEENYNDGYNWCIEIIKTSNLSWLANE 458
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAE---KM 188
LE+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY G +E A
Sbjct: 459 LELNKALVYLRQNDVNQAIETLQMYDRKSEGSMTASALTNLSFIYISLGNLEMASHCLNQ 518
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
++ +T N+ A +N G M +++ ++ + AL T EA YNLGL
Sbjct: 519 LQDIGALET-NALALINAGIVDMQKQNLSSARDRFERALQLQPTSFEANYNLGLVALAQQ 577
Query: 249 EYSDSLECFH--KLQAIVPSMPE---VLYQIASLYE 279
++ + E F K Q +VP + V YQ+A L E
Sbjct: 578 DFQQAEEQFELLKAQLMVPHSVQHSHVYYQLAKLQE 613
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+L+A++ D L+ ++ ++ ++ I LI+P IE+N+++GYNWC++ I+ S S LA
Sbjct: 397 VLQALKTDELALYTKQKRNAEKRSITMIVDLISPIIEENYNDGYNWCIEIIKTSNLSWLA 456
Query: 355 QDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYF 397
+LE+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY
Sbjct: 457 NELELNKALVYLRQNDVNQAIETLQMYDRKSEGSMTASALTNLSFIYI 504
>gi|194877984|ref|XP_001973983.1| GG21485 [Drosophila erecta]
gi|190657170|gb|EDV54383.1| GG21485 [Drosophila erecta]
Length = 868
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 116/215 (53%), Gaps = 12/215 (5%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ E ++ ++ I LI+P IEDN+++GYNWC++ I+ S + LA +
Sbjct: 390 QALKKDELAIYTNERRNAVKRSITMIVDLISPFIEDNYNDGYNWCIEIIKTSNLAWLANE 449
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAE- 190
LE+NKA+ +LR NDV+QA+ L KS MT+SA TNLSFIY G +E A
Sbjct: 450 LELNKALVYLRQNDVNQAIITLQMYDRKSEGSMTASALTNLSFIYISLGNLEMAYHCVNQ 509
Query: 191 -EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E + N++ +N G +A +E + AL T EA YNL L N+
Sbjct: 510 LEEIGSLKNNASGLINAGIVELASHKLTLARERFERALQLQPTNFEARYNLALLALAQND 569
Query: 250 YSDSLECFH--KLQAIVPSMPE---VLYQIASLYE 279
+ + E F K Q ++PS + V YQ+A L E
Sbjct: 570 FELAEERFELLKAQLMMPSSVQHSHVFYQLAKLQE 604
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
Query: 288 SDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN 347
+ V + +A++ D L+ E ++ ++ I LI+P IEDN+++GYNWC++ I+
Sbjct: 381 TKVKYRYVFQALKKDELAIYTNERRNAVKRSITMIVDLISPFIEDNYNDGYNWCIEIIKT 440
Query: 348 SAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIY 396
S + LA +LE+NKA+ +LR NDV+QA+ L KS MT+SA TNLSFIY
Sbjct: 441 SNLAWLANELELNKALVYLRQNDVNQAIITLQMYDRKSEGSMTASALTNLSFIY 494
>gi|195443416|ref|XP_002069413.1| GK18677 [Drosophila willistoni]
gi|194165498|gb|EDW80399.1| GK18677 [Drosophila willistoni]
Length = 883
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 120/221 (54%), Gaps = 14/221 (6%)
Query: 72 RKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHS 131
R+ +A++ D L+ ++ ++ ++ I LI+P IE+N+++GYNWC++ IR S S
Sbjct: 389 RRYVLQALKTDELATYTKQKRNVEKRSITMIVDLISPIIEENYNDGYNWCIEVIRTSNLS 448
Query: 132 SLAQDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAE 186
LA ++E+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY G +E A
Sbjct: 449 WLANEMELNKALVYLRQNDVNQAIETLQMYDRKSEGSMTASALTNLSFIYINLGNLEMAS 508
Query: 187 ---KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
+E +T N+ A VN + +++ KE A+ T EA YNLGL
Sbjct: 509 HCLNQLKELGALET-NALALVNASIVEIQKQNLASAKEQLHRAVQLQPTNFEANYNLGLV 567
Query: 244 HKHLNEYSDSLECFH--KLQAIVP---SMPEVLYQIASLYE 279
+Y + E F K Q +VP V YQ+A L E
Sbjct: 568 ALAEQDYEQAEEKFELLKSQLMVPHSVQHSHVYYQLAKLQE 608
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Query: 295 LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 354
+L+A++ D L+ ++ ++ ++ I LI+P IE+N+++GYNWC++ IR S S LA
Sbjct: 392 VLQALKTDELATYTKQKRNVEKRSITMIVDLISPIIEENYNDGYNWCIEVIRTSNLSWLA 451
Query: 355 QDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYF 397
++E+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY
Sbjct: 452 NEMELNKALVYLRQNDVNQAIETLQMYDRKSEGSMTASALTNLSFIYI 499
>gi|195115896|ref|XP_002002492.1| GI17413 [Drosophila mojavensis]
gi|193913067|gb|EDW11934.1| GI17413 [Drosophila mojavensis]
Length = 880
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 114/215 (53%), Gaps = 12/215 (5%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ ++ ++ ++ + LI+P IE+N+++GYNWC++ IR S S LA +
Sbjct: 387 QALKTDELAIYTKQRRNTEKRSVTMIVDLISPLIEENYNDGYNWCIEVIRTSNLSWLANE 446
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEE 191
LE+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY G +E A +
Sbjct: 447 LELNKALVYLRQNDVNQAIETLQMYDRKSESSMTASALTNLSFIYINLGNLEMATHCLNQ 506
Query: 192 ACTADTYNSA--AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++ A VN M ++Y E AL D T EA YNLGL +
Sbjct: 507 LQELGALQTSVLALVNASIVDMLNQNYSSAGERLQRALQLDPTSFEANYNLGLLAIKQQD 566
Query: 250 YSDSLECFH--KLQAIVP---SMPEVLYQIASLYE 279
Y + E F K Q + P V YQ+A L E
Sbjct: 567 YELAEEQFELLKAQLMQPHSVQHSHVYYQLAKLQE 601
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 82/129 (63%), Gaps = 6/129 (4%)
Query: 275 ASLYEITGDVEQAS-DVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDN 333
S YE D ++S + +L+A++ D L+ ++ ++ ++ + LI+P IE+N
Sbjct: 364 GSSYEQLNDPTKSSANAKNRYVLQALKTDELAIYTKQRRNTEKRSVTMIVDLISPLIEEN 423
Query: 334 FSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSA 388
+++GYNWC++ IR S S LA +LE+NKA+ +LR NDV+QA++ L KS MT+SA
Sbjct: 424 YNDGYNWCIEVIRTSNLSWLANELELNKALVYLRQNDVNQAIETLQMYDRKSESSMTASA 483
Query: 389 ATNLSFIYF 397
TNLSFIY
Sbjct: 484 LTNLSFIYI 492
>gi|78709111|ref|NP_724347.2| no mechanoreceptor potential B, isoform A [Drosophila melanogaster]
gi|72151646|gb|AAF57218.3| no mechanoreceptor potential B, isoform A [Drosophila melanogaster]
Length = 852
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 27/220 (12%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ E ++ ++ I LI+P IEDN+++GYNWC++ I+ S + LA +
Sbjct: 385 QALKKDELAVYRNERRNAVKRSITMIVDLISPFIEDNYNDGYNWCIEIIKTSNLAWLANE 444
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEE 191
LE+NKA+ +LR NDV QA++ L KS MT+SA TNLSFIY KMA
Sbjct: 445 LELNKALVYLRQNDVHQAIETLQMYDRKSEGSMTASALTNLSFIYI---------KMASH 495
Query: 192 ACTADTY-------NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAH 244
C + N+ +N G + + + E + AL EA YNLGL
Sbjct: 496 -CVNQLHEIGSLKNNAPGLINAGIVELGSHNLILASERFEGALQLQPMNFEARYNLGLVA 554
Query: 245 KHLNEYSDSLECFHKL--QAIVPSMPE---VLYQIASLYE 279
N+Y + E F L Q ++PS + V YQ+A L E
Sbjct: 555 LAQNDYELAEERFELLKEQLMLPSSVQHSHVFYQLAKLQE 594
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 189/425 (44%), Gaps = 67/425 (15%)
Query: 4 PEEKFERMEQEIIGLIDESCICAR--------NQDFK--AALEKAKLASNKERVLIKLQE 53
P+ K++ +E++I+ L++ S + A N D K AL KAK A + +R L + ++
Sbjct: 110 PQMKYKNLEEKIVKLLESSIVLAWQGSPNKLLNLDTKLAEALSKAKEAFSLDRTLHQFRD 169
Query: 54 QFGHADSHNIELTFSNINRKK-NARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 112
Q G HN +LT++ R + + A+ ++ ++ H + + + I
Sbjct: 170 QHGENVYHNFDLTYAQYERSEMHIEALNTYSIMAKNKMFPHVNQLKLNMGNIYYSMGIYQ 229
Query: 113 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSA---- 168
Y + S+ S S L + N + F+RM S A + MT A
Sbjct: 230 KAVKMYRMALDSVPKSL-SQLRLKIRENIGILFIRMGSYSDAASSFEFI--MTERANIRS 286
Query: 169 ATNLSFIYFLQGEVEQAE-------KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
+ +L YF G+VE+ + + EA +D + + L A + G+
Sbjct: 287 SIHLLLCYFALGDVEKVKLAFRRLCDVQTEAIESDMESETNIIKLQQQAEPIQQI--GET 344
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
+L+N+ + G LNE
Sbjct: 345 DGYQSLNNEPVTGSVIKAEGGGK--LNE-------------------------------- 370
Query: 282 GDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC 341
V+ A+ V +++A++ D L+ E ++ ++ I LI+P IEDN+++GYNWC
Sbjct: 371 -TVKFAATVKHRYVVQALKKDELAVYRNERRNAVKRSITMIVDLISPFIEDNYNDGYNWC 429
Query: 342 VQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIY 396
++ I+ S + LA +LE+NKA+ +LR NDV QA++ L KS MT+SA TNLSFIY
Sbjct: 430 IEIIKTSNLAWLANELELNKALVYLRQNDVHQAIETLQMYDRKSEGSMTASALTNLSFIY 489
Query: 397 FLVSS 401
++S
Sbjct: 490 IKMAS 494
>gi|195580671|ref|XP_002080158.1| GD21636 [Drosophila simulans]
gi|194192167|gb|EDX05743.1| GD21636 [Drosophila simulans]
Length = 851
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 17/224 (7%)
Query: 68 SNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN 127
S + + +A++ D L+ E ++ ++ I LI+P IEDN+++GYNWC++ I+
Sbjct: 376 STMKHRYVVQALKKDELAIYRNERRNAIKRSITMIVDLISPFIEDNYNDGYNWCIEIIKT 435
Query: 128 SAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGE- 181
S + LA +LE+NKA+ +LR NDV QA++ L KS MT+SA TNLSFIY
Sbjct: 436 SNLAWLANELELNKALVYLRQNDVHQAIETLQIYDRKSEGSMTASALTNLSFIYIKMASH 495
Query: 182 -VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
V Q +++ + N+ +N G + + + E + AL EA YNL
Sbjct: 496 CVNQLQEIG-----SLKNNALGLINAGIVELGSHNLILASERFERALQLQPMNFEARYNL 550
Query: 241 GLAHKHLNEYSDSLECFHKL--QAIVPSMPE---VLYQIASLYE 279
GL N+Y + E F L Q ++PS + V YQ+A L E
Sbjct: 551 GLVALAQNDYELAEERFELLKEQLMMPSSVQHSHVFYQLAKLQE 594
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 190/426 (44%), Gaps = 69/426 (16%)
Query: 4 PEEKFERMEQEIIGLIDESCICAR--------NQDFK--AALEKAKLASNKERVLIKLQE 53
P+ K++ +E++I+ L++ S + A N D K AL KAK A + +R L + ++
Sbjct: 110 PQMKYKNLEEKIVKLLESSIVLAWQSSSNKLLNVDAKLSEALNKAKEAFSLDRTLHQFRD 169
Query: 54 QFGHADSHNIELTFSNINRKK-NARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 112
Q G HN +LT++ R + + A+ ++ ++ H + + + I
Sbjct: 170 QHGENVYHNFDLTYAQYERSEMHIEALNTYSIMAKNKMFPHVNQLKLNMGNIYYSMGIYQ 229
Query: 113 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSA---- 168
Y + S+ S S L + N V F+RM A + MT A
Sbjct: 230 KAVKMYRMALDSVPKSL-SQLRLKIRENIGVLFIRMGSYLDAASSFEFI--MTERANIRS 286
Query: 169 ATNLSFIYFLQGEVEQAE-------KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
+ +L Y+ G+VE+ + + EA +DT + + L A E + E
Sbjct: 287 SIHLLLCYYALGDVEKVKLAFRRLCDVQTEAIESDTESETNIIKLQQQA---EPIQQIGE 343
Query: 222 LYVH-ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
VH +LDN + G LNE
Sbjct: 344 TDVHQSLDNGQVPGSVIRTEGGGK--LNE------------------------------- 370
Query: 281 TGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNW 340
V+ AS + +++A++ D L+ E ++ ++ I LI+P IEDN+++GYNW
Sbjct: 371 --TVKFASTMKHRYVVQALKKDELAIYRNERRNAIKRSITMIVDLISPFIEDNYNDGYNW 428
Query: 341 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFI 395
C++ I+ S + LA +LE+NKA+ +LR NDV QA++ L KS MT+SA TNLSFI
Sbjct: 429 CIEIIKTSNLAWLANELELNKALVYLRQNDVHQAIETLQIYDRKSEGSMTASALTNLSFI 488
Query: 396 YFLVSS 401
Y ++S
Sbjct: 489 YIKMAS 494
>gi|294930717|ref|XP_002779669.1| tetratricopeptide repeat protein 10, tpr10, putative [Perkinsus
marinus ATCC 50983]
gi|239889077|gb|EER11464.1| tetratricopeptide repeat protein 10, tpr10, putative [Perkinsus
marinus ATCC 50983]
Length = 398
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 127/241 (52%), Gaps = 33/241 (13%)
Query: 81 NDALSQ-LHREMKHEAEKCILTSAKLIAPSIEDNFSNG-YNWCVQSIRNSAHSSLAQDLE 138
+D L + +H +K E+ IL +A+LIAP + + + G Y+W + ++ + + ++A +E
Sbjct: 44 DDPLGEFIHTRIK-ESRNIILQAAELIAPVLGRDENGGDYDWVIDTLYRAGYRNIAAKME 102
Query: 139 INKAVTFLRMNDVSQAVDVLKS------------------------------CDEMTSSA 168
INKA +L+ +A+ LKS + ++A
Sbjct: 103 INKAHYYLKHKQFHEAIITLKSFQEEQQEGEEGQPNLNTTTKTTTIHHHHHTTNTTMAAA 162
Query: 169 ATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD 228
ATNLSFIYF +G ++AE+ A+ A D YN A VN GNC + + KELY+ A+
Sbjct: 163 ATNLSFIYFQEGNYKEAERYADMAIKIDRYNCEALVNKGNCLFVCNELYRAKELYLEAIG 222
Query: 229 NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
+ C+EA+YNLGL K EY+++L F KLQ I + +VL+Q+ +Y + ++A
Sbjct: 223 VASYCLEAIYNLGLVCKQACEYNEALIAFTKLQEITKNNCDVLWQLGDIYHKISNYKKAH 282
Query: 289 D 289
+
Sbjct: 283 E 283
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 301 NDALSQ-LHREMKHEAEKCILTSAKLIAPSIEDNFSNG-YNWCVQSIRNSAHSSLAQDLE 358
+D L + +H +K E+ IL +A+LIAP + + + G Y+W + ++ + + ++A +E
Sbjct: 44 DDPLGEFIHTRIK-ESRNIILQAAELIAPVLGRDENGGDYDWVIDTLYRAGYRNIAAKME 102
Query: 359 INKAVTFLRMNDVSQAVDVLKS 380
INKA +L+ +A+ LKS
Sbjct: 103 INKAHYYLKHKQFHEAIITLKS 124
>gi|95007262|emb|CAJ20482.1| tetratricopeptide repeat protein, putative [Toxoplasma gondii RH]
Length = 556
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 8/182 (4%)
Query: 127 NSAHSSLAQDLEINKAVTFLRMN-DVSQAVDVLKSCDE-------MTSSAATNLSFIYFL 178
N + LA ++E++KA LR+ V AV + +S + +T A TNLSFIY L
Sbjct: 153 NHGYRELAYEIEMHKANALLRLKCGVDTAVKIYRSFEHVERHHAVLTPRAWTNLSFIYIL 212
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ ++ QA K A+ A +AD YN+ A VN G C + + + L++ AL D C+EALY
Sbjct: 213 ENDLPQATKYADIALSADRYNAHALVNKGCCLLLAGKRQEARHLFLEALGLDTECVEALY 272
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEA 298
N GLA K ++ ++LE F + I+PS PEVLY + + E G E+ + L
Sbjct: 273 NFGLACKIDDQLDEALEAFSRFNQILPSQPEVLYHLGDISESMGQYEKTMEWFSLLTSPG 332
Query: 299 VR 300
VR
Sbjct: 333 VR 334
>gi|401396337|ref|XP_003879797.1| putative intraflagellar transport particle protein [Neospora
caninum Liverpool]
gi|325114205|emb|CBZ49762.1| putative intraflagellar transport particle protein [Neospora
caninum Liverpool]
Length = 540
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 127 NSAHSSLAQDLEINKAVTFLRMN-DVSQAVDVLKSCDE-------MTSSAATNLSFIYFL 178
N + LA ++E++KA LR+ V AV + +S + +T AATNLSFIY L
Sbjct: 179 NEGYRDLAYEIEMHKAAALLRVKCGVDAAVKIYRSFERVERQHAVLTPRAATNLSFIYLL 238
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ ++ QA K + A D YN+ A VN G C + + + L++ AL DA C+EALY
Sbjct: 239 EDDLSQATKYTDIALAGDRYNAFALVNKGCCLLLGGKRQEARNLFLEALGLDAECVEALY 298
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEA 298
N GLA K ++ ++L+ F + I P PEVLY + + E G E+A + L
Sbjct: 299 NFGLACKLDAQFEEALKAFSRFHQIFPRHPEVLYHLGDISEAMGHSEKAVEWFSLLTSPG 358
Query: 299 VR-NDA--LSQLHREMKHEAE 316
VR DA L ++ R AE
Sbjct: 359 VRPTDAGILGRIGRAAASRAE 379
>gi|221482767|gb|EEE21098.1| intraflagellar transport particle protein, putative [Toxoplasma
gondii GT1]
Length = 414
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 8/181 (4%)
Query: 128 SAHSSLAQDLEINKAVTFLRMN-DVSQAVDVLKSCDE-------MTSSAATNLSFIYFLQ 179
S + LA ++E++KA LR+ V AV + +S + +T A TNLSFIY L+
Sbjct: 33 SGYRELAYEIEMHKANALLRLKCGVDTAVKIYRSFEHVERHHAVLTPRAWTNLSFIYILE 92
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
++ QA K A+ A +AD YN+ A VN G C + + + L++ AL D C+EALYN
Sbjct: 93 NDLPQATKYADIALSADRYNAHALVNKGCCLLLAGKRQEARHLFLEALGLDTECVEALYN 152
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
GLA K ++ ++LE F + I+PS PEVLY + + E G E+ + L V
Sbjct: 153 FGLACKIDDQLDEALEAFSRFNQILPSQPEVLYHLGDISESMGQYEKTMEWFSLLTSPGV 212
Query: 300 R 300
R
Sbjct: 213 R 213
>gi|237840515|ref|XP_002369555.1| intraflagellar transport particle protein, putative [Toxoplasma
gondii ME49]
gi|211967219|gb|EEB02415.1| intraflagellar transport particle protein, putative [Toxoplasma
gondii ME49]
gi|221503438|gb|EEE29136.1| intraflagellar transport particle protein, putative [Toxoplasma
gondii VEG]
Length = 414
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 100/181 (55%), Gaps = 8/181 (4%)
Query: 128 SAHSSLAQDLEINKAVTFLRMN-DVSQAVDVLKSCDE-------MTSSAATNLSFIYFLQ 179
S + LA ++E++KA LR+ V AV + +S + +T A+TNLSFIY L+
Sbjct: 33 SGYRELAYEIEMHKANALLRLKCGVDTAVKIYRSFEHVERHHAVLTPRASTNLSFIYILE 92
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
++ QA K A+ A +AD YN+ A VN G C + + + ++ AL DA C+EALYN
Sbjct: 93 NDLPQATKYADIALSADRYNAHALVNKGCCLLLAGKRQEARHHFLEALGLDAECVEALYN 152
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
GLA K ++ ++LE F + I+PS PEVLY + + E G E+ + L V
Sbjct: 153 FGLACKIDDQLDEALEAFSRFNQILPSQPEVLYHLGDISESMGQYEKTMEWFSLLTSPGV 212
Query: 300 R 300
R
Sbjct: 213 R 213
>gi|195051710|ref|XP_001993155.1| GH13661 [Drosophila grimshawi]
gi|193900214|gb|EDV99080.1| GH13661 [Drosophila grimshawi]
Length = 885
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 14/216 (6%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ ++ ++ ++ I LI+P IE+N+++GYNWC++ IR S S LA +
Sbjct: 396 QALKTDELAIYTKQRRNVEKRSITMIVDLISPLIEENYNDGYNWCIEVIRTSNLSWLANE 455
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAE---KM 188
LE+NKA+ +LR NDV+QA+++L KS MT+SA TNLSFIY G +E A
Sbjct: 456 LELNKALVYLRQNDVNQAIEMLQMYDRKSESSMTASALTNLSFIYINLGNMEMATHCLNQ 515
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
+E T + A VN ++ +E AL D T EA YNLGL
Sbjct: 516 LQEIGALQT-SPLALVNASIVDKLNQNLSSARERLQRALQLDPTSFEANYNLGLIALQEQ 574
Query: 249 EYSDSLECFH--KLQAIVP-SM--PEVLYQIASLYE 279
++ + E F K Q + P SM V YQ+A L E
Sbjct: 575 DFEQAEEQFELLKAQLMEPHSMQHSHVYYQLAKLQE 610
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 198/436 (45%), Gaps = 83/436 (19%)
Query: 4 PEEKFERMEQEIIGLIDESCICA------------RNQDFKA----ALEKAKLASNKERV 47
P+ K++ ME +I+ L++ S + A N + K+ AL KAK AS+ +R+
Sbjct: 107 PQIKYKNMETKIVKLLESSIVLAARCSPNRPSGPNNNTEVKSSLAEALNKAKDASSLDRI 166
Query: 48 LIKLQEQFGHADSHNIELTFSNINRKKNARAVRNDALSQLHREMKHEAEKC--ILTSAKL 105
L Q++ G HN ELT++ N A H EM EA I+T K+
Sbjct: 167 LHHEQDKQGENVFHNFELTYA---------VFFNLAEQYEHNEMHIEALNTYNIMTKNKM 217
Query: 106 IAPSIED---NFSNGY------NWCVQSIR---NSAHSSLAQ-DLEI--NKAVTFLRMND 150
P + N N Y ++ R +S ++L Q L+I N V F+RM
Sbjct: 218 F-PHVNQLKLNMGNIYFKMGMHKKAIKMYRMALDSVPNTLKQLRLKITENIGVLFVRMGQ 276
Query: 151 VSQAVDVLK--SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY-NSAAFVNLG 207
S A + + + +L Y+ G+V++ + C N N
Sbjct: 277 YSDAASSFEFIMSERADIRSGIHLLLCYYAMGDVDKIKSTFRSLCEVQPVENERDLENEN 336
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
N ++ ++ HA + T + +G H + AI+ +
Sbjct: 337 NI-------IRLQQQAEHAEKSGTTQAQ----VGDTHAEV--------------AIIDA- 370
Query: 268 PEVLYQIASLYEITGDVEQASDVNEN-LLLEAVRNDALSQLHREMKHEAEKCILTSAKLI 326
S YE + ++S +N +L+A++ D L+ ++ ++ ++ I LI
Sbjct: 371 -----NGGSSYEQVNETNKSSANTKNRYVLQALKTDELAIYTKQRRNVEKRSITMIVDLI 425
Query: 327 APSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----KSC 381
+P IE+N+++GYNWC++ IR S S LA +LE+NKA+ +LR NDV+QA+++L KS
Sbjct: 426 SPLIEENYNDGYNWCIEVIRTSNLSWLANELELNKALVYLRQNDVNQAIEMLQMYDRKSE 485
Query: 382 DEMTSSAATNLSFIYF 397
MT+SA TNLSFIY
Sbjct: 486 SSMTASALTNLSFIYI 501
>gi|195398443|ref|XP_002057831.1| GJ18348 [Drosophila virilis]
gi|194141485|gb|EDW57904.1| GJ18348 [Drosophila virilis]
Length = 891
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 114/215 (53%), Gaps = 12/215 (5%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ ++ ++ ++ I LI+P IE+N+++GYNWC++ IR S S LA +
Sbjct: 395 QALKTDELAIYTKQRRNTEKRSITMIVDLISPLIEENYNDGYNWCIEVIRTSNLSWLANE 454
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEE 191
LE+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY G +E A +
Sbjct: 455 LELNKALVYLRQNDVNQAIETLQMYDRKSESSMTASALTNLSFIYINLGNLEMATHCLNQ 514
Query: 192 ACTADTYNSA--AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++ A VN M ++ +E AL D + EA YNLGL +
Sbjct: 515 LQELGALQTSVLALVNASIVDMRSQNLSSARERLQRALQLDPSSFEANYNLGLLALQQQD 574
Query: 250 YSDSLECFH--KLQAIVP---SMPEVLYQIASLYE 279
+ + E F K Q + P V YQ+A L E
Sbjct: 575 FELAEEQFELLKAQLMQPHSVQHSHVYYQLAKLQE 609
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 84/128 (65%), Gaps = 6/128 (4%)
Query: 276 SLYEITGDVEQASDVNENL-LLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNF 334
S YE + ++S +NL +L+A++ D L+ ++ ++ ++ I LI+P IE+N+
Sbjct: 373 SSYEQVTEPNKSSANAKNLYVLQALKTDELAIYTKQRRNTEKRSITMIVDLISPLIEENY 432
Query: 335 SNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAA 389
++GYNWC++ IR S S LA +LE+NKA+ +LR NDV+QA++ L KS MT+SA
Sbjct: 433 NDGYNWCIEVIRTSNLSWLANELELNKALVYLRQNDVNQAIETLQMYDRKSESSMTASAL 492
Query: 390 TNLSFIYF 397
TNLSFIY
Sbjct: 493 TNLSFIYI 500
>gi|194760491|ref|XP_001962473.1| GF14426 [Drosophila ananassae]
gi|190616170|gb|EDV31694.1| GF14426 [Drosophila ananassae]
Length = 877
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 14/216 (6%)
Query: 77 RAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 136
+A++ D L+ + ++ ++ I LI+P IE+N+++GYNWC++ I+ S + LA +
Sbjct: 398 QAIKTDELALYTKNRRNAEKRSITMIVDLISPIIEENYNDGYNWCIEIIKTSNLAWLANE 457
Query: 137 LEINKAVTFLRMNDVSQAVDVL-----KSCDEMTSSAATNLSFIYFLQGEVEQAE---KM 188
LE+NKA+ +LR NDV+QA++ L KS MT+SA TNLSFIY G +E A
Sbjct: 458 LELNKALVYLRQNDVTQAIETLQMYDRKSEGSMTASALTNLSFIYISLGNLEMATHCLNQ 517
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
+E +T + A +N + +++ ++ AL+ T EA YNLGL
Sbjct: 518 LQEIGALET-SPMALINASIVDLKKQNLSSARDRLERALELQPTNFEANYNLGLVALAQQ 576
Query: 249 EYSDSLECFH--KLQAIVPSMPE---VLYQIASLYE 279
++ + E F K Q +VP + V YQ+A L E
Sbjct: 577 DFELAEERFELLKAQLMVPHSVQHSHVFYQLAKLQE 612
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 196/435 (45%), Gaps = 79/435 (18%)
Query: 4 PEEKFERMEQEIIGLIDESCICAR-----------NQDFKA----ALEKAKLASNKERVL 48
P+ K++ +E +I+ L++ S + + + D K+ AL KAK A + +R L
Sbjct: 107 PQIKYKNLEAKIVKLLESSIVLSWQSSATRSSVEVSPDSKSSLTEALNKAKEAFSLDRTL 166
Query: 49 IKLQEQFGHADSHNIELT---FSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKL 105
+ ++Q G HN +LT F N+ + RND LH E + I+T K+
Sbjct: 167 HRFRDQQGENVYHNFDLTYAVFFNLAEQYE----RND----LHIEALNTY--SIMTKNKM 216
Query: 106 IAPSIED---NFSN-----G-YNWCVQSIR---NSAHSSLAQ-DLEI--NKAVTFLRMND 150
P + N N G Y V+ R +S +L+Q L+I N V F+RM
Sbjct: 217 F-PQVNQLKINMGNIYYKMGIYQKAVKMYRMALDSVPKTLSQLRLKITENIGVLFVRMGS 275
Query: 151 VSQAVDVLK--SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGN 208
S A + + + +L Y+ G+VE+ + AF +L +
Sbjct: 276 YSDAASSFEFIMSERGDIKSGIHLVLCYYALGDVEKIK--------------TAFRSLCD 321
Query: 209 CAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP 268
+ E + L A + +L K L+ + + A
Sbjct: 322 VQAGETETDLDSESQILKLQQQAGNAAGVQDL---QKSLDREDNGGADVAVIDA------ 372
Query: 269 EVLYQIASLYE-ITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIA 327
+ YE + V+ ++ + +L+A++ D L+ + ++ ++ I LI+
Sbjct: 373 ----EGGGTYEKVQETVKTSAKEKQRYVLQAIKTDELALYTKNRRNAEKRSITMIVDLIS 428
Query: 328 PSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL-----KSCD 382
P IE+N+++GYNWC++ I+ S + LA +LE+NKA+ +LR NDV+QA++ L KS
Sbjct: 429 PIIEENYNDGYNWCIEIIKTSNLAWLANELELNKALVYLRQNDVTQAIETLQMYDRKSEG 488
Query: 383 EMTSSAATNLSFIYF 397
MT+SA TNLSFIY
Sbjct: 489 SMTASALTNLSFIYI 503
>gi|307103895|gb|EFN52152.1| hypothetical protein CHLNCDRAFT_27125 [Chlorella variabilis]
Length = 740
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 126/250 (50%), Gaps = 9/250 (3%)
Query: 76 ARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLA 134
+RA D L + + E +L +++LIAP + ++S G++WC + S++S+LA
Sbjct: 321 SRAREPDTLRVQQETKQAQVEGYVLAASRLIAPLLHGTSWSTGFDWCRAQLNTSSYSALA 380
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLK----SCDEMTSSAATNLSFIYFLQGEVEQAEKMAE 190
++++ KA L + + AV +LK S ++AA NLS + L+G++E A +
Sbjct: 381 SEVQLAKANEHLARKEYAAAVVLLKEFGRSDSRQRAAAAVNLSMLSLLEGQLETAAGYGD 440
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
C AD ++AA V+ GN M +LY AL D C++AL+N GLA + L
Sbjct: 441 YCCEADPGSAAALVSRGNVHMGHGQAEAALQLYEDALQLDDACLQALFNGGLACRSLGLP 500
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA----LSQ 306
+L +L PS E ++Q A L + D +A D LL +A + A L
Sbjct: 501 DRALLLMQRLLHANPSHAEAMWQAAELCDELADSVRAVDWLTRLLTKASHDSAVLSRLGT 560
Query: 307 LHREMKHEAE 316
LH ++ EAE
Sbjct: 561 LHAKLGDEAE 570
>gi|241723185|ref|XP_002413701.1| tetratricopeptide repeat protein 10, tpr10, putative [Ixodes
scapularis]
gi|215507517|gb|EEC17009.1| tetratricopeptide repeat protein 10, tpr10, putative [Ixodes
scapularis]
Length = 303
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 25/166 (15%)
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ------------ 286
N+GLA + + +D++ + A L+ I Y I GD ++
Sbjct: 3 NIGLAFVKMGQLADAITSLEYIMAERADFRSALHLIVCHYTI-GDRDKMKRSFLKLLDVV 61
Query: 287 ------------ASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNF 334
+ D ENL E ++ND+L Q+ RE +HEAE CILT+AKLIAP I +F
Sbjct: 62 LEHVDDEKGEPSSDDPIENLYYEEIKNDSLQQIERERRHEAEWCILTAAKLIAPVISTSF 121
Query: 335 SNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKS 380
S GY WCV+ I+ SA+S +A DLEI+KAV +LR + +Q+ S
Sbjct: 122 SEGYEWCVEQIKASAYSDIANDLEISKAVAYLRKREFNQSYRYFPS 167
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 75/115 (65%), Gaps = 6/115 (5%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
++ND+L Q+ RE +HEAE CILT+AKLIAP I +FS GY WCV+ I+ SA+S +A DLE
Sbjct: 86 IKNDSLQQIERERRHEAEWCILTAAKLIAPVISTSFSEGYEWCVEQIKASAYSDIANDLE 145
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEV-EQAEKMAEEA 192
I+KAV +LR + +Q+ S E+ Y+++ ++ E+A K E+A
Sbjct: 146 ISKAVAYLRKREFNQSYRYFPSNIEIIEWLGA-----YYIESQLFEKAIKYFEKA 195
>gi|339252496|ref|XP_003371471.1| putative tetratricopeptide repeat-containing domain protein
[Trichinella spiralis]
gi|316968313|gb|EFV52609.1| putative tetratricopeptide repeat-containing domain protein
[Trichinella spiralis]
Length = 1494
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 179/411 (43%), Gaps = 77/411 (18%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
+ K ++EQ++I L+ S N + K ALE AK A +ER L KL+EQ + +++
Sbjct: 541 DAKCRKIEQKVITLLKCSATAVENSELKQALEFAKEAVRRERALAKLREQQNIIEQPSLD 600
Query: 65 LTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC 121
LTFS N+ ++ A + ++A+S ++ C + LI I F Y +
Sbjct: 601 LTFSVLFNLAQQYEANELYSEAISMYETLTMNKMFPC---AGDLIIGKI---FFIAYMF- 653
Query: 122 VQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGE 181
+ L DL +N ++R S+A+ + Q
Sbjct: 654 -------TYFILIADLGVNIGRIYMRQEQFSKAIQ--------------------YFQQA 686
Query: 182 VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
+EQ + T N+G + Y Y +L A AL N
Sbjct: 687 LEQVPSVQR------TSRRKIINNIGVALTKLKRYEDAISRYEQSLQIKADFPVAL-NAL 739
Query: 242 LAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN 301
L LN+ H+++ ++ E+ SL EI+ + + +D+
Sbjct: 740 LCAFLLNDK-------HRMKTFFLNLLEI-----SL-EISDEAKYFTDM----------- 775
Query: 302 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 361
+ Q K +E+ ILT+A LI+ I + F++GY WCV+ I+ S +S +A D+EINK
Sbjct: 776 --VRQFEMNRKKLSERTILTAANLISSRIANKFADGYAWCVEMIKKSKYSDIADDMEINK 833
Query: 362 AVTFLRMNDVSQAVDVLKSCDEMTS----SAATNLSFIYFLVSSEFQYLPT 408
A+ FL+ DV+ A D+ ++ ++ S SA N++ I L F+Y P+
Sbjct: 834 AIEFLKCGDVTSAHDIFRTFEKKDSRASASALNNMALISLL---SFRYYPS 881
>gi|312073163|ref|XP_003139396.1| TPR Domain containing protein [Loa loa]
Length = 418
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
Query: 162 DEMTSSAATNLSFIYFLQG--EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
D++ S+AA +L+ I LQG ++E+A + +E+A +AD YN+ A VN GN D K
Sbjct: 8 DKVASAAANSLAVINLLQGGPKLEEAIQYSEQALSADRYNANALVNRGNIFFVLGDLEKA 67
Query: 220 KELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ Y AL N+A+C++ALYNLG + + +LECF+KL I+ + +VL Q+AS+YE
Sbjct: 68 AQYYKEALSNEASCLQALYNLGYVQRLQGKLEAALECFYKLHNILLNNVQVLCQLASIYE 127
Query: 280 ITGDVEQA 287
+ D QA
Sbjct: 128 LLEDTAQA 135
>gi|397620179|gb|EJK65583.1| hypothetical protein THAOC_13539 [Thalassiosira oceanica]
Length = 648
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 76 ARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQ 135
AR D Q +REM +A + + +A G+ + ++ H +A
Sbjct: 305 ARGGEADPSDQSNREMAEKAARLLSATA-------------GHERIL-ALLEGGHDDIAD 350
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATN---LSFIYFLQGEVEQAEKMAEEA 192
+E+ A+ L+ D S A L+S + +S A+ LSF+Y L+ + +A+K +E A
Sbjct: 351 AIELEFALGSLKNADSSFATKALRSLHKKSSKKASAAICLSFVYLLERNMGKAKKYSEAA 410
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+D YNS A VN GNC K Y+ A+ N C +A++NLGLA++ L S+
Sbjct: 411 LKSDGYNSTALVNKGNCLFEEGKIADAKSCYLDAIVNRPDCAQAVFNLGLANQQLGLLSE 470
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITG 282
+++ F +L P+ +VLYQIA+ ++ G
Sbjct: 471 AIKAFEQLHQTTPNSVQVLYQIANTQDMMG 500
>gi|384252675|gb|EIE26151.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 470
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 127/268 (47%), Gaps = 43/268 (16%)
Query: 94 EAEKCILTSAKLIAPSI------------EDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
+A + +L +A+LIAP++ ++G+ WC ++ + LA L +
Sbjct: 70 QAGEQVLHAARLIAPAVIAVADPDIAKSGGATSADGWRWCAAALAAAGLRRLAGQLRM-- 127
Query: 142 AVTFLRMN--DVSQAVDVLKS--CDEMTS--SAATNLSFIYFLQGEVEQAEKMAEEACTA 195
AV +RM+ + A L+ ++M AA NLS + LQ + ++AE AE A TA
Sbjct: 128 AVVAVRMHALEFESAEWALQEFEAEDMGGEVRAAVNLSSLRLLQDQPQEAEASAERALTA 187
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHA--LDNDATCIEALYNLGLAHKHLNEYSDS 253
D+ ++ A LGN A D K LYV A LDN + C A YN GL K L D+
Sbjct: 188 DSRDTLALTCLGNARTAAGDLEGAKRLYVDALTLDNSSYC--AQYNYGLVSKRLGYLEDA 245
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL----LEA-VRNDA----- 303
L F +L + P +V+ Q+A + ++Q D E +L L A V DA
Sbjct: 246 LSVFRQLHDVTPGSADVMCQVADV------LDQKQDYTEAILRLERLHALVPGDAGILAK 299
Query: 304 LSQLHREMK--HEAEKCILTSAKLIAPS 329
L+ +H ++ EA +C L A AP+
Sbjct: 300 LAGVHAKLGAVQEAARC-LEEAHAAAPT 326
>gi|195354059|ref|XP_002043518.1| GM16135 [Drosophila sechellia]
gi|194127665|gb|EDW49708.1| GM16135 [Drosophila sechellia]
Length = 648
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 163/384 (42%), Gaps = 64/384 (16%)
Query: 7 KFERMEQEIIGLIDESCICAR--------NQDFKA--ALEKAKLASNKERVLIKLQEQFG 56
K++ +E++I+ L++ S + A N D K AL KAK A + +R L + ++Q G
Sbjct: 2 KYKNLEEKIVKLLESSIVLAWQSSTNKLLNMDAKLSEALNKAKEAFSLDRTLHQFRDQHG 61
Query: 57 HADSHNIELTFSNINRKK-NARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFS 115
HN +LT++ R + + A+ ++ ++ H + + + I
Sbjct: 62 ENVYHNFDLTYAQYERSEMHIEALNTYSIMAKNKMFPHVNQLKLNMGNIYYSMGIYQKAV 121
Query: 116 NGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSA----ATN 171
Y + S+ S S L + N V F+RM A + MT A + +
Sbjct: 122 KMYRMALDSVPKSL-SQLRLKIRENIGVLFIRMGSYLDAASSFEFI--MTERANIRSSIH 178
Query: 172 LSFIYFLQGEVEQAE-------KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
L Y+ G+VE+ + + EA +DT + + L A E + E V
Sbjct: 179 LLLCYYALGDVEKVKLAFRRLCDVQTEAIESDTESETNIIKLQQQA---EPIQQIGETDV 235
Query: 225 H-ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
H +LDN +P + + ++
Sbjct: 236 HQSLDNG-----------------------------------QVPGSVIRAEGGGKLNET 260
Query: 284 VEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQ 343
V+ AS + +++A++ D L+ E ++ ++ I LI+ IEDN+++GYNWC++
Sbjct: 261 VKFASTMKHRYVVQALKKDELAIYRNERRNAVKRSITMIVDLISHFIEDNYNDGYNWCIE 320
Query: 344 SIRNSAHSSLAQDLEINKAVTFLR 367
I+ S + LA +LE+NKA+ +LR
Sbjct: 321 IIKTSNLAWLANELELNKALVYLR 344
>gi|294884943|ref|XP_002771158.1| tetratricopeptide repeat protein 10, tpr10, putative [Perkinsus
marinus ATCC 50983]
gi|239874504|gb|EER02974.1| tetratricopeptide repeat protein 10, tpr10, putative [Perkinsus
marinus ATCC 50983]
Length = 275
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%)
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYS 251
A D YN A VN GNC + + KELY+ A+ + C+EA+YNLGL K EY+
Sbjct: 2 AIKIDRYNCEALVNKGNCLFVCNELYRAKELYLEAIGVASYCLEAIYNLGLVCKQACEYN 61
Query: 252 DSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
++L F KLQ I + +VL+Q+ +Y + ++A +
Sbjct: 62 EALIAFTKLQEITKNNCDVLWQLGDIYHKISNYKKAHE 99
>gi|402581912|gb|EJW75859.1| hypothetical protein WUBG_13234 [Wuchereria bancrofti]
Length = 88
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%)
Query: 79 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 138
+ ND+L Q R+ ++ AEK I + K+++ I S+GY WCV++IR S ++ LA ++E
Sbjct: 2 ISNDSLKQWERQRRNIAEKTIFIATKILSSVIASTVSDGYKWCVEAIRQSVYAPLAMEIE 61
Query: 139 INKAVTFLRMNDV 151
++K V L+ D+
Sbjct: 62 MSKVVVLLKQGDI 74
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%)
Query: 299 VRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE 358
+ ND+L Q R+ ++ AEK I + K+++ I S+GY WCV++IR S ++ LA ++E
Sbjct: 2 ISNDSLKQWERQRRNIAEKTIFIATKILSSVIASTVSDGYKWCVEAIRQSVYAPLAMEIE 61
Query: 359 INKAVTFLRMNDV 371
++K V L+ D+
Sbjct: 62 MSKVVVLLKQGDI 74
>gi|60697932|gb|AAX30925.1| SJCHGC08795 protein [Schistosoma japonicum]
Length = 69
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 224 VHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
+ AL +D C+EALYNLGL K L Y +SLE F KL AI+ + V+YQI YE GD
Sbjct: 1 MEALQDDTRCVEALYNLGLVCKQLERYEESLEAFFKLHAILRNNASVVYQIMDNYEKLGD 60
Query: 284 VEQASD 289
QA +
Sbjct: 61 STQAQE 66
>gi|270210253|gb|ACZ64518.1| IFT88-like protein [Schmidtea mediterranea]
Length = 315
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 2 ERPEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSH 61
+ PE+K + +E+++ LIDESC+ A +F AL KA+ A ERVLI+ ++Q G AD
Sbjct: 76 DTPEDKIKLIEKKVNSLIDESCLAASKGNFSLALNKAEEAGKNERVLIRQRDQLGVADQM 135
Query: 62 NIELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSN----- 116
N++LT+S + N A +++++E H + + A ++ N N
Sbjct: 136 NLDLTYSVLFNLANQYAA-----NKMYQEALHTYQTIVKNKMFTHAGRLKVNMGNIYFSL 190
Query: 117 -GYNWCVQSIR------NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAA 169
Y+ ++ R + H + + N ++F+++ + A+ + +
Sbjct: 191 KNYSRAIKMYRMGLDQVPTTHKFMRIKIMQNIGLSFVKLGQYNDAIASFEHIMQEDPDPK 250
Query: 170 TNLSFI--YFLQGEVEQAEKMAEEACTAD 196
T L+ I Y+ +G+ + + ++ +AD
Sbjct: 251 TGLNLILCYYAKGDRVKMKSAFQKLLSAD 279
>gi|350589690|ref|XP_003130918.3| PREDICTED: intraflagellar transport protein 88 homolog [Sus scrofa]
Length = 451
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 23/200 (11%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESC+ + D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 134 PEEKIRQLEKKVNELVEESCVASSCGDLKLALEKAKDAGRKERVLVRQREQVASPENINL 193
Query: 64 ELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNF 114
+LT+S + + +A + +AL+ +K++ + ++A + ++ + N+
Sbjct: 194 DLTYSVLFTLASQYSANEMYAEALNTYQVIVKNK----MFSNAGRLKVNMGNIYLKQRNY 249
Query: 115 SNG---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVD----VLKSCDEMTSS 167
S Y + I S H + + N VTF++ S AV+ ++ + +
Sbjct: 250 SKAIKFYRMALDQI-PSVHKEMRIKIMQNIGVTFIKTGQYSDAVNSFEHIMSTAPNL--K 306
Query: 168 AATNLSFIYFLQGEVEQAEK 187
A NL YF G+ E+ +K
Sbjct: 307 AGFNLILSYFALGDREKMKK 326
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + + +Y K + Y ALD + I+ + N+G+ +YSD++ F
Sbjct: 237 VNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAVNSFE 296
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND 302
+ + P++ I S + + GD E+ + L+ A+ D
Sbjct: 297 HIMSTAPNLKAGFNLILSYFAL-GDREKMKKAFQKLIAVALEID 339
>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Trigonal Crystal Form)
gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Orthorombic Crystal Form)
Length = 136
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 63/122 (51%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ A NL Y+ QG+ ++A + ++A D ++ A+ NLGN + DY + E Y
Sbjct: 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 60
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
AL+ D EA YNLG A+ +Y +++E + K + P E Y + + Y GD +
Sbjct: 61 ALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYD 120
Query: 286 QA 287
+A
Sbjct: 121 EA 122
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N + + D +A++ + D ++ A NL Y+ QG+ ++A + ++A D
Sbjct: 6 NLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 65
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
++ A+ NLGN + DY + E Y AL+ D EA YNLG A+ +Y +++E
Sbjct: 66 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEY 125
Query: 257 FHKLQAIVP 265
+ K + P
Sbjct: 126 YQKALELDP 134
>gi|327399475|ref|YP_004340344.1| hypothetical protein Hipma_1328 [Hippea maritima DSM 10411]
gi|327182104|gb|AEA34285.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima
DSM 10411]
Length = 260
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Query: 112 DNFSNGYNWCVQSIRNS-----AHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS 166
DNF + ++C ++I + A+++LA I F +++ +++ DE +
Sbjct: 53 DNFDDAEDYCNKAIEINPNNLEAYNTLAM---IYHKFGFFE-DEIEALNEIIIRLDEPDA 108
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
S N+ Y+ GE ++A + + A + + A+ N+GN MA+++Y+K E Y A
Sbjct: 109 SIYLNIGNAYYELGENDRAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAYKQA 168
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
L D + NLG+ + L Y ++++ F + I P P Y + ++ + + E+
Sbjct: 169 LQIDPNMSDVYLNLGIVYGELGSYDEAVKYFEQSIRINPYNPSAHYNLGIIWVMLNEKEK 228
Query: 287 ASDVNENL 294
A + E L
Sbjct: 229 ALNEYERL 236
>gi|320162434|ref|YP_004175659.1| hypothetical protein ANT_30330 [Anaerolinea thermophila UNI-1]
gi|319996288|dbj|BAJ65059.1| hypothetical protein ANT_30330 [Anaerolinea thermophila UNI-1]
Length = 778
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 199 NSAAF---VNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
N A F +N G+ A +D+VK + Y ALD AL +LGLA+ L EY +LE
Sbjct: 4 NQAVFQQAMNQGHSAAWDQDWVKAAQYYAQALDEMPDSPLALSSLGLAYFELGEYERALE 63
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
C+ + I P+ P ++ +YE G +++AS+V
Sbjct: 64 CYQRASKIAPTDPVPYEKLTRIYERMGKLKEASEV 98
>gi|428307734|ref|YP_007144559.1| hypothetical protein Cri9333_4261 [Crinalium epipsammum PCC 9333]
gi|428249269|gb|AFZ15049.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 331
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 22/249 (8%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEM---TSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
+N+ + L+ V+ A+ + ++ ++A NL QGE++ A A A
Sbjct: 81 MNQGLQSLQQGKVADAIAAFRQASQLDPDLAAAHYNLGLALRQQGEIQLAADAFYRAIQA 140
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + F NLG + + + K+ A++ + A YNLGL + L E D++
Sbjct: 141 DPSFALGFTNLGAALLEGNNLQQAKDYLGRAVELNPNSGVANYNLGLVREQLGELGDAIA 200
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEA 315
F K P PE +Y + +Y G +++A E +A++ ++ + E +
Sbjct: 201 SFKKAVQFSPKAPEAVYHLGLMYLQQGKLDEAKKSFE----QAIK---INSKYAEAHYNL 253
Query: 316 EKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAV 375
L KL D + ++ RN A++ + FL+ N+ S+A
Sbjct: 254 GGIYLNQGKL------DTALEAFRKSAEANRNYANAYYG------AGIVFLQQNNYSEAQ 301
Query: 376 DVLKSCDEM 384
VL+ ++
Sbjct: 302 RVLQYAQQL 310
>gi|253741619|gb|EES98485.1| Intraflagellar transport particle protein IFT88 [Giardia
intestinalis ATCC 50581]
Length = 829
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAR--------EDYVKGKE 221
TN++FIY+L+G+ E + + A+ A D Y+S A +NLG C ++ +++K +E
Sbjct: 496 TNIAFIYYLKGDYEASARHAQIALEIDPYDSFAHINLG-CTYSKTNQWELSLREFLKAQE 554
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
+ + + ++A+YN GL + EY + CF K+ +PS + +Y A
Sbjct: 555 INMES-------VQAIYNAGLVYFKQQEYKTAYSCFQKVANKLPSYGDAIYMSADCLARM 607
Query: 282 GDVEQASDVNENLL 295
+++A + NL+
Sbjct: 608 SQIDEAIQMLSNLV 621
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 57 HADSHNIELTFSNINRKKNARA------VRNDA----LSQLHREMKHEAEKCILTSAKLI 106
H DS IE + I+ K+ A A + ND LS+ + ++HE +L SA+L+
Sbjct: 284 HPDSLEIEDNHNGISSKQIAMADAELCNMSNDDELDDLSRYNATVRHEHTNKLLISARLL 343
Query: 107 APSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD 162
APSI S GY +R H ++ ++++ A+T L+ N+ +A D++ D
Sbjct: 344 APSIAWEESQGYAKLSDILREKGHHGISLQVQMSMALTLLKRNEFEKATDIMLRID 399
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 232 TCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY------QIASLYEITGDVE 285
T + Y LG+ K ++ YS ++ ++ P+ L I+S D E
Sbjct: 253 TVLIGYYALGVPEKMIDAYSRLIDS----SILIGDHPDSLEIEDNHNGISSKQIAMADAE 308
Query: 286 QASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSI 345
+ N++ L D LS+ + ++HE +L SA+L+APSI S GY +
Sbjct: 309 LCNMSNDDEL------DDLSRYNATVRHEHTNKLLISARLLAPSIAWEESQGYAKLSDIL 362
Query: 346 RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCD 382
R H ++ ++++ A+T L+ N+ +A D++ D
Sbjct: 363 REKGHHGISLQVQMSMALTLLKRNEFEKATDIMLRID 399
>gi|403371722|gb|EJY85745.1| TPR Domain containing protein [Oxytricha trifallax]
Length = 1558
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 161 CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
D+ + NL FL GEVEQ+ ++A + S A+ NLGN + DY++
Sbjct: 1365 IDQKQADVHYNLGNALFLSGEVEQSVVHYQKAIEQNPQKSEAYYNLGNALCGKSDYIQAV 1424
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
+ Y LD ALYN+G A+ + ++++ + K I E + IAS Y
Sbjct: 1425 DAYQKTLDLSPQNGPALYNMGNAYYMQGKTREAIDTYSKAIEINDKSAETFFNIASAYND 1484
Query: 281 TGDVEQA 287
G+++ A
Sbjct: 1485 VGEIDHA 1491
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN 229
T L +Y Q E+A +M ++A T + A V +GN + Y HAL
Sbjct: 1272 TQLGMLYLEQQNYEKAAEMLKQAITVNKQYGVALVTMGNLLFETGQSSDSLKYYKHALAQ 1331
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ ++AL LG AH L ++ + ++ I +V Y + + ++G+VEQ+
Sbjct: 1332 NEKDVQALIGLGNAHYDLKNMKRAIGFYQRVLEIDQKQADVHYNLGNALFLSGEVEQS 1389
>gi|351695577|gb|EHA98495.1| Intraflagellar transport protein 88-like protein [Heterocephalus
glaber]
Length = 75
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK ++E+++ L++ESCI D K ALEKAK A KERVL++ +EQ ++ N+
Sbjct: 3 PEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQLTTPENINL 62
Query: 64 ELTFS 68
+LT+S
Sbjct: 63 DLTYS 67
>gi|405978103|gb|EKC42517.1| Intraflagellar transport protein 88-like protein [Crassostrea
gigas]
Length = 517
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 7 KFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIELT 66
K ++E+++ LI+ESC D ALEKAK A KERVL++ +EQ D N++LT
Sbjct: 232 KIRQLEKKVNELIEESCFANSTGDLSLALEKAKEAGRKERVLVRQREQQSMGDQINLDLT 291
Query: 67 FS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI------EDNFSNG 117
+S N+ + A + N+AL+ +K++ + T+A + ++ + N+
Sbjct: 292 YSVLFNLANQYAANEMFNEALNTYQVIVKNK----MFTNAGRLKVNMGNIYFRQRNYPKA 347
Query: 118 ---YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSF 174
Y + + NS H + + N + F++M + A+ + + + T +
Sbjct: 348 IKFYRMALDQVPNS-HKEMRTKIMQNVGIVFVKMGQYNDAITSFEHIMQEAPNFKTGFNL 406
Query: 175 I--YFLQGEVEQAEKMAEEACTAD 196
I YF G+ E+ ++ ++ T D
Sbjct: 407 ILCYFALGDREKMKRGFQKLLTVD 430
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 30/136 (22%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALYNLGLAHKHLNEYSDSLECFH 258
VN+GN + +Y K + Y ALD + + N+G+ + +Y+D++ F
Sbjct: 332 VNMGNIYFRQRNYPKAIKFYRMALDQVPNSHKEMRTKIMQNVGIVFVKMGQYNDAITSFE 391
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQ------------------------ASDVNENL 294
+ P+ + + + Y GD E+ D N NL
Sbjct: 392 HIMQEAPNF-KTGFNLILCYFALGDREKMKRGFQKLLTVDLRIDDEDKYLPHGEDKNYNL 450
Query: 295 LLEAVRNDALSQLHRE 310
+LE ++NDAL Q+ R+
Sbjct: 451 ILEVIKNDALRQIERK 466
>gi|411117213|ref|ZP_11389700.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410713316|gb|EKQ70817.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 304
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 119 NWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFI 175
N VQ I+ + ++S + +N+ + F++ +++A+ + D ++A NL
Sbjct: 31 NPFVQPIQVAQNASQTAEAAVNQGLQFIQQGKLNEAIAAFRRAGQLDPKMAAAHYNLGLA 90
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLG-------NCAMAREDYVKGKELYVHALD 228
QG+++ A +A AD + A+ NLG N A AR DY+K A++
Sbjct: 91 LRQQGQLQPAASAFYQATQADPQFALAYANLGAALLEGNNVAQAR-DYLK------RAIE 143
Query: 229 NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
D A YNLGLA + Y + F + + P+ PE Y + +Y G
Sbjct: 144 LDPKLGLAYYNLGLALEQQRAYDQAAIAFKRSSELSPNAPEPAYHLGLVYLQQG 197
>gi|451981544|ref|ZP_21929896.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
gi|451761217|emb|CCQ91160.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
Length = 660
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 128 SAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEK 187
+AH SL N V R+ND A++ S D + A +L+ I+F G EQAEK
Sbjct: 225 AAHVSLG-----NLYVDTDRLNDAEDAINKALSIDSNSVDARHSLALIHFQSGLFEQAEK 279
Query: 188 MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHL 247
+ N++ + NLGN + E Y + E Y A + L+NLGL ++ L
Sbjct: 280 EWRACLRREPDNASFYNNLGNSLSSMERYEEAIETYQKAFALEPDNPLPLFNLGLVYEDL 339
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + ++ + + + P L IA+LY G E+A
Sbjct: 340 DRFQEAEDNYLHALRLNPQHLSALVNIANLYSNLGRSEEA 379
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 34/253 (13%)
Query: 152 SQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM 211
+QA+ C E A L + Q +AEK + DT NS NLG+
Sbjct: 44 NQALGYDADCAE----ALLGLGIVRHRQQRYPEAEKYYRASLKLDTENSRTLNNLGSLYH 99
Query: 212 AREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVL 271
+E + + + Y+ AL+ D NLGL H ++ + F + P +
Sbjct: 100 DQERWEEAEREYLKALEIDPDYALPHNNLGLLHARRQDFEGARAAFETAMRLDPEYDQAH 159
Query: 272 YQIASLY---EITGDVEQASDVNENLLL---EAVRNDALSQLHREM-KHEAEKCILTSAK 324
Y + +LY + E+A E+L L A + L L+ + ++E + +
Sbjct: 160 YNLGNLYFDHQKYALAEKA--YKESLRLNPDSAFTHHELGNLYHHLGRYEEAEQEFQESL 217
Query: 325 LIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEM 384
+ P +E +AH SL N V R+ND A++ S D
Sbjct: 218 FLDPKLE----------------AAHVSLG-----NLYVDTDRLNDAEDAINKALSIDSN 256
Query: 385 TSSAATNLSFIYF 397
+ A +L+ I+F
Sbjct: 257 SVDARHSLALIHF 269
>gi|428319709|ref|YP_007117591.1| methyltransferase FkbM family [Oscillatoria nigro-viridis PCC 7112]
gi|428243389|gb|AFZ09175.1| methyltransferase FkbM family [Oscillatoria nigro-viridis PCC 7112]
Length = 1162
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 152 SQAVDVLKSCDEMTSSAAT--NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC 209
SQ ++ L EM +AA L+ +Y +QG++E A + E+A + A+ LGN
Sbjct: 960 SQLIEALTQLREMEGAAAPLNQLAELYLVQGKLEDAISVCEQALKIRPTFAPAYKTLGNV 1019
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
A+ + K Y+ AL+ +AL NLG H ++ +++ + K AI P
Sbjct: 1020 FQAQGKLDEAKSWYIRALEIQPDFAQALANLGTIHAQQQQWQEAIASYQKAIAIQPHFAG 1079
Query: 270 VLYQIASLYEITGDVEQA 287
+A ++ G ++A
Sbjct: 1080 FYRNLAKVFSQIGKPDEA 1097
>gi|357627592|gb|EHJ77245.1| putative tetratricopeptide repeat protein 10, tpr10 [Danaus
plexippus]
Length = 905
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 12/76 (15%)
Query: 5 EEKFERMEQEIIGLIDESCI------------CARNQDFKAALEKAKLASNKERVLIKLQ 52
E+K ++ME +I+ L++ESC+ R Q+ AL KA+ AS ER LI++Q
Sbjct: 116 EDKVKQMEAKIMTLVEESCVLVARRDTDDENDSTREQNLSQALAKAQEASTLERQLIRMQ 175
Query: 53 EQFGHADSHNIELTFS 68
EQ DSHN++LTF+
Sbjct: 176 EQANLGDSHNLDLTFA 191
>gi|428223794|ref|YP_007107891.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
gi|427983695|gb|AFY64839.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
Length = 2232
Score = 57.8 bits (138), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G++ A + + A D A+ NLG+ A+E + Y AL + + +EA YN
Sbjct: 1757 GQMPAAVQHYQRAIALDPRYGEAYCNLGSVLHAQEQFAAAVTQYRQALQHKPSLLEAHYN 1816
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
LG A + LN++ +LEC+ + A+ P P+ + + + G E+
Sbjct: 1817 LGAALQKLNQFDAALECYQRAIALQPDAPQPYQNLGTALQELGRYEE 1863
Score = 38.1 bits (87), Expect = 7.7, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 44/109 (40%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
QG + +A A A NLGN + + + Y AL T ++
Sbjct: 132 QGRIPEAIAAYRRAVELQPGFWEALGNLGNNLRQQGQWSEAMACYQQALQAQPTALDPWL 191
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
NLG A + +++S+ C+ + A+ P E + Y+ G +E A
Sbjct: 192 NLGAAWREGGNWAESIRCYERAIALHPQAAEAHSGLGITYKEAGQLEGA 240
>gi|71401557|ref|XP_803488.1| intraflagellar transport protein IFT88 [Trypanosoma cruzi strain CL
Brener]
gi|70866379|gb|EAN81961.1| intraflagellar transport protein IFT88, putative [Trypanosoma
cruzi]
Length = 284
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEE+ +E+ I LI+ES + A +D+ +ALEKAK AS KER L K +EQ G AD N
Sbjct: 132 PEEQCAEVEKLIHKLIEESAMLALQKDYGSALEKAKEASKKERQLCKQREQLGLADQINA 191
Query: 64 ELTFS 68
+LT++
Sbjct: 192 DLTYA 196
>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
Length = 545
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFL------QGEVEQAEKMAEEACTADTYNSA 201
+ + +A +V+K E S N + + FL +G++ +AEK+ E D N
Sbjct: 96 LKEDKKAFEVIK---EAYKSFPFNENVVLFLANEYINKGKLREAEKVLLEYMETDPDNPL 152
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
+ LG +A+ D KG E ++ AL+ A+ +LG + ++ ++ E + +
Sbjct: 153 PYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYAPAVLSLGNLYLQEKKFKEAEELYKSVL 212
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN 301
P+ P++L ++A LY +G +E+A + E L+ RN
Sbjct: 213 EKYPNSPKILEKLAKLYTASGRIEEAIKIYEKLINLKPRN 252
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 39/196 (19%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD--- 228
L IY +G++++ + +A Y + A ++LGN + + + + +ELY L+
Sbjct: 157 LGRIYLAKGDIQKGMEYFLKALEKKKYYAPAVLSLGNLYLQEKKFKEAEELYKSVLEKYP 216
Query: 229 NDATCIEALYNL------------------GLAHKHLN-------------EYSDSLECF 257
N +E L L L +++N E+ + +
Sbjct: 217 NSPKILEKLAKLYTASGRIEEAIKIYEKLINLKPRNVNYKTEYALLLLSTGEFDKAKKIL 276
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN----DALSQLHREMK- 312
+L + PS P V + A E TG++++A ++ ENLL N + L ++ ++
Sbjct: 277 EELYYVNPSNPNVAFAYALTLEATGELKKAKEIYENLLNRFPENIKVIERLIGIYLDLGN 336
Query: 313 HEAEKCILTSAKLIAP 328
+E K ++ AK++AP
Sbjct: 337 YEDAKRLIEKAKVLAP 352
>gi|449686728|ref|XP_004211241.1| PREDICTED: intraflagellar transport protein 88 homolog, partial
[Hydra magnipapillata]
Length = 204
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK + +E++ + L++ESC A DFK ALEKAK A ER L + QEQ + N+
Sbjct: 140 PEEKLKILEKQTMALVEESCYAAERNDFKLALEKAKEAGRMERNLCRHQEQSQLTEHINL 199
Query: 64 ELTFS 68
++T+S
Sbjct: 200 DITYS 204
>gi|322421648|ref|YP_004200871.1| glycosyl transferase family protein [Geobacter sp. M18]
gi|320128035|gb|ADW15595.1| glycosyl transferase family 9 [Geobacter sp. M18]
Length = 991
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ A NL + +GE E AE A A+VNLG+C E+ + ELY H
Sbjct: 589 ADAYNNLGTLLVSRGEHEAAEPQFRRAIELAPDCLPAYVNLGSCLQVLEEPAQAVELYRH 648
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
A+D + +EA NLG A++ L + ++E + +L + P PE + +A G+ E
Sbjct: 649 AIDLNPDYLEARINLGTAYQDLMQPQKAIETYEELLRLAPEHPEGHWNLALSLLSVGEFE 708
Query: 286 QA 287
+
Sbjct: 709 RG 710
>gi|162452134|ref|YP_001614501.1| MerR family transcriptional regulator [Sorangium cellulosum So
ce56]
gi|161162716|emb|CAN94021.1| transcriptional regulator, MerR family [Sorangium cellulosum So
ce56]
Length = 338
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%)
Query: 182 VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
+++AE + A D + + A+ NLGN R + + LY+ ALD DA+ EA YNLG
Sbjct: 209 MDEAEALYRRALEIDPWLAIAYTNLGNICFRRNAEEQAEALYMKALDLDASQPEAQYNLG 268
Query: 242 LAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ +D++ F A P + Y +A YE GD +A
Sbjct: 269 YVMLERGQAADAIRYFQGAIASDPRFADAYYNLAMAYEQIGDPTKA 314
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D + A TNL I F + EQAE + +A D A NLG + R
Sbjct: 223 DPWLAIAYTNLGNICFRRNAEEQAEALYMKALDLDASQPEAQYNLGYVMLERGQAADAIR 282
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
+ A+ +D +A YNL +A++ + + + + C+ + I P+
Sbjct: 283 YFQGAIASDPRFADAYYNLAMAYEQIGDPTKARPCWRRYLEIEPT 327
>gi|145512772|ref|XP_001442298.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409633|emb|CAK74901.1| unnamed protein product [Paramecium tetraurelia]
Length = 1421
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 117 GYNWCVQSIRNSAHSSLAQD------LEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT 170
G + QS++++ LA E+N+ T LR +A+D+ D+ A
Sbjct: 1158 GIEYMNQSLKHNQSFGLAWKAVGNIMYEMNQPATALRY--FQKAIDL----DKNDMEAKI 1211
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
L Y+LQ + EQA ++ EE D N ++ NC + D+ + Y AL +
Sbjct: 1212 RLGNCYYLQDQFEQAIQIYEEISHLDQ-NEELEQHMANCYYKKNDFEEAVLHYQRALSIN 1270
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
+ IE YNLG + + ++ ++LECF K+ P Y A+ + + D E A+
Sbjct: 1271 SDKIECYYNLGDTYFTMEKFEEALECFEKVVKNDPQHSAAFYNYANTFFVLEDYENAA 1328
>gi|320035567|gb|EFW17508.1| transcriptional corepressor Cyc8 [Coccidioides posadasii str.
Silveira]
Length = 580
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ ADT ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 286 EQAIEYLEKSVAADTNDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 345
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 346 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 382
>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 125
Score = 55.5 bits (132), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 56/105 (53%)
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
++ A NL Y+ QG+ ++A + ++A D N+ A+ NLGN + DY + E Y
Sbjct: 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67
Query: 225 HALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
AL+ D EA YNLG A+ +Y +++E + K + P+ E
Sbjct: 68 KALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE 112
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 196 DTYNSA-AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D NSA A+ NLGN + DY + E Y AL+ D EA YNLG A+ +Y +++
Sbjct: 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAI 63
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E + K + P+ E Y + + Y GD ++A
Sbjct: 64 EYYQKALELDPNNAEAWYNLGNAYYKQGDYDEA 96
Score = 45.1 bits (105), Expect = 0.076, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEM---TSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N + + D +A++ + E+ + A NL Y+ QG+ ++A + ++A D
Sbjct: 14 NLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHK 245
N+ A+ NLGN + DY + E Y AL+ D EA NLG A +
Sbjct: 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122
>gi|116622726|ref|YP_824882.1| hypothetical protein Acid_3625 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 547
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 143 VTFLRMN--DVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADT 197
+ FLR+ D A + + C + + A NL+ Y GE + AE++ E+ AD
Sbjct: 374 MGFLRLQREDYRGAAEAFEGCLKYRPAWPEAHANLALAYSGMGERDHAERLYEKMLDADP 433
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+ A L ++ DY E +V +D E LYN GL ++ + S+ +
Sbjct: 434 KSMDALRGLAALSIQANDYDTALEFHVRLIDLGDRTPEVLYNAGLMYEKAGQQDKSVRLY 493
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
A MPE L + + E G E+A
Sbjct: 494 RDALAQQADMPEALLNLGRILESNGKAEEA 523
>gi|258565165|ref|XP_002583327.1| RCM-1 protein [Uncinocarpus reesii 1704]
gi|237907028|gb|EEP81429.1| RCM-1 protein [Uncinocarpus reesii 1704]
Length = 850
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ ADT ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 286 EQAIEYLEKSVAADTNDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 345
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 346 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 382
>gi|392868824|gb|EAS34623.2| transcriptional corepressor Cyc8 [Coccidioides immitis RS]
Length = 854
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ ADT ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 286 EQAIEYLEKSVAADTNDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 345
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 346 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 382
>gi|358386833|gb|EHK24428.1| hypothetical protein TRIVIDRAFT_208488 [Trichoderma virens Gv29-8]
Length = 867
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIY 176
C + I NS L Q D+ + D A + + + + A L ++Y
Sbjct: 206 CFKYIVNSPPGPLTQEDIWFQIGHVHEQQKDFDGAKSAYQRVLDQSPNHAKVLQQLGWLY 265
Query: 177 FLQGEV----EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
Q E+ + E++ AD ++ ++ LG C M+++ Y K E Y A+ D
Sbjct: 266 HQQSPAYDSQERGIQYLEKSVAADNQDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGK 325
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 326 NPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 372
>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
Length = 733
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N + F ++S A++ + E+ + NL IY QG +E A ++A
Sbjct: 257 NLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALILK 316
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
A NLGN + + Y AL++ + EA NLG ++ + +S+
Sbjct: 317 ENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRI 376
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
F K A+ P PE+L + + E GD+E A
Sbjct: 377 FKKALALHPDHPEILSNLGTSLEEKGDLEAA 407
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 40/189 (21%)
Query: 129 AHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKM 188
AH+SL L+ K L ++ +A+++ E A NL FIY QG++E
Sbjct: 186 AHNSLGLALQA-KGEKNLAISSFIKALEIKPEFPE----ACYNLGFIYLNQGDIE----- 235
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
TA Y + A + + +Y EAL NLG+A K
Sbjct: 236 -----TAINYFNKAL-------LLKWNYP-----------------EALNNLGIAFKAKG 266
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD-VNENLLLEAVRNDALSQL 307
E S ++ + K I PEV Y + S+Y G++E A + + L+L+ +AL+ L
Sbjct: 267 EISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALNNL 326
Query: 308 HREMKHEAE 316
++ + E
Sbjct: 327 GNSLQEKGE 335
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Query: 142 AVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ R++++ AV+ + S + + NL +G+++ A + A
Sbjct: 89 GIALKRLDNLEAAVESFQKALSINPNCPKSNYNLGNALLEEGKLDSAIAFLKTAVDFKPD 148
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
S A NLG +A ++ ++L EA +LGLA + E + ++ F
Sbjct: 149 FSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPAFPEAHNSLGLALQAKGEKNLAISSFI 208
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASD-VNENLLLEAVRNDALSQLHREMKHEAE 316
K I P PE Y + +Y GD+E A + N+ LLL+ +AL+ L K + E
Sbjct: 209 KALEIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLKWNYPEALNNLGIAFKAKGE 267
>gi|303315243|ref|XP_003067629.1| tetratricopeptide repeat containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107299|gb|EER25484.1| tetratricopeptide repeat containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 854
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ ADT ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 286 EQAIEYLEKSVAADTNDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 345
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 346 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 382
>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
Length = 345
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 141 KAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
KAV + +A ++LK + D+ + L IY +G E+A K ++A
Sbjct: 32 KAVIHFHTGNNIKAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVKYLKKAVEKGK 91
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+ F +LG + D K + Y A++ A YN GLA K + +Y ++++ +
Sbjct: 92 -KAEYFNDLGYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNY 150
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
++ A+ P P+ Y + +Y I GD+++A
Sbjct: 151 NRAIALNPEDPDYYYNLGIVYRIKGDLQKA 180
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATN---LSFIYFLQGEVEQAEKMAEEA 192
D N + + D+ +AV+ K E+ L +Y+ + ++A + ++A
Sbjct: 162 DYYYNLGIVYRIKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECYKKA 221
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+ + NLGN + DY K + + AL D E ++G+A K L Y +
Sbjct: 222 VEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGRYDE 281
Query: 253 SLECFHKLQAIVPSMPEV-LYQIASLYEITGDVEQA 287
+L+ + K + I P + + LY A LY GD E+A
Sbjct: 282 ALKAYEKAEQINPDLKALSLYNKACLYASKGDKEKA 317
>gi|296812083|ref|XP_002846379.1| RCM-1 [Arthroderma otae CBS 113480]
gi|238841635|gb|EEQ31297.1| RCM-1 [Arthroderma otae CBS 113480]
Length = 910
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q EQA + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 309 LGWLYHQQNNNYSSQEQAIEYLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 368
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 369 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 420
>gi|358399715|gb|EHK49052.1| hypothetical protein TRIATDRAFT_172465, partial [Trichoderma
atroviride IMI 206040]
Length = 871
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIY 176
C + I NS L Q D+ + D A + + + + A L ++Y
Sbjct: 212 CFKYIVNSPPGPLTQEDIWFQIGHVHEQQKDFDGAKSAYQRVLDQSPNHAKVLQQLGWLY 271
Query: 177 FLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
Q ++++ E++ AD ++ ++ LG C M+++ Y K E Y A+ D
Sbjct: 272 HQQSPSYESQERGIQYLEKSVAADNQDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGK 331
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 332 NPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 378
>gi|429857961|gb|ELA32798.1| transcriptional corepressor cyc8, partial [Colletotrichum
gloeosporioides Nara gc5]
Length = 404
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + E++ AD ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 269 ERAIEFLEKSVAADQGDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 328
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 329 LYYQINQYRDALDAYSRAIRLNPFISEVWYDLGTLYE 365
>gi|378726959|gb|EHY53418.1| glucose repression mediator protein [Exophiala dermatitidis
NIH/UT8656]
Length = 801
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ ++D ++ ++ LG C MA++ + K E Y A+ D ++G+
Sbjct: 279 EQAIEYLEQSVSSDNQDAQSWYLLGRCYMAQQKFPKAYEAYQQAVYRDGRNPTFWCSIGV 338
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 339 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 375
>gi|428225876|ref|YP_007109973.1| hypothetical protein GEI7407_2446 [Geitlerinema sp. PCC 7407]
gi|427985777|gb|AFY66921.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 300
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 11/173 (6%)
Query: 114 FSNGYNWCVQSIRNSAHSSLAQDLE------INKAVTFLRMNDVSQAVDVLKSCDEMTSS 167
F W V SI +A LAQ +N+ V + N + +A+ ++ + +
Sbjct: 15 FVGAPGWAVPSI--AAPVQLAQSSGETAEDWLNRGVQAAQQNKLDEAIAAFQTAARLNPA 72
Query: 168 AAT---NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
A NL +GE++ A A +D S AF NLG + + + ++
Sbjct: 73 LAPAHYNLGLALRQKGELQPAADAFYRATQSDPQFSLAFANLGAALLEGNNLDQAEDYLG 132
Query: 225 HALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
A++ DA A YNLGL N+ ++ F K P PE LY + L
Sbjct: 133 RAIELDADLGLAHYNLGLVLSRQNQPEKAIAAFQKAIQFSPKAPEPLYHLGLL 185
>gi|170576883|ref|XP_001893802.1| TPR Domain containing protein [Brugia malayi]
gi|158599976|gb|EDP37361.1| TPR Domain containing protein [Brugia malayi]
Length = 348
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 5 EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNIE 64
EEK +MEQ++ L+ ES D K ALEKAK A +ER ++K++EQ + N++
Sbjct: 129 EEKCRQMEQKVNELLKESIFAWEKGDMKQALEKAKEAGRRERTIVKMREQLSILEQLNLD 188
Query: 65 LTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNG---- 117
LTF+ N+ + A + +AL+ +K+ K + S +L A F
Sbjct: 189 LTFTVLFNLAHQYMANNLLTEALNTYQMIVKN---KMFVNSGRLKANIANIYFKQKEYKK 245
Query: 118 ----YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLS 173
Y + + NS ++ + + N V+F++ + +A + C + T L+
Sbjct: 246 AIKLYQIALDQVPNSQKNTRIKIMN-NIGVSFIKCGEYDEADSTFEHCMNEKGNYNTALN 304
Query: 174 FI 175
FI
Sbjct: 305 FI 306
>gi|154289277|ref|XP_001545282.1| hypothetical protein BC1G_16179 [Botryotinia fuckeliana B05.10]
Length = 611
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 283 EQAIEYLEQSVGSDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 342
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 343 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 379
>gi|380471192|emb|CCF47397.1| glucose repression mediator protein CYC8, partial [Colletotrichum
higginsianum]
Length = 308
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + E++ AD ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 154 ERAIEFLEKSVAADQGDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 213
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 214 LYYQINQYRDALDAYSRAIRLNPFISEVWYDLGTLYE 250
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G E+A + E+A + A+ N G +A +DY K E + L + ++++YN
Sbjct: 529 GRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYN 588
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENL 294
G A L + +LECF K+ ++ P P++LY +A G E+A + E L
Sbjct: 589 RGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKL 643
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 186 EKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHK 245
+K +E++ + + Y+S F G + E Y + E++ +N+ +EA Y G++H
Sbjct: 1006 QKFSEQSISKEKYSS--FYWKGLVLIRLEAYERALEVFSRLTENNPLFVEAWYLKGISHS 1063
Query: 246 HLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L ++ ++ + F K+ + P+ + YQ+ Y G+ E+A V E+ L
Sbjct: 1064 KLKQHKEAAKDFEKVLELDPAYQDTCYQLGLSYFELGNFEEAIRVFESAL 1113
>gi|453089441|gb|EMF17481.1| TPR-like protein [Mycosphaerella populorum SO2202]
Length = 925
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 291 EQAIEYLEKSVASDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 350
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 351 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 387
>gi|322695628|gb|EFY87433.1| transcriptional corepressor Cyc8 [Metarhizium acridum CQMa 102]
Length = 855
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E++ +AD ++ ++ LG C MA++ Y K E Y A+ D ++G+ + +N+
Sbjct: 285 EKSVSADNQDAQSWYLLGRCYMAQQKYPKAYEAYQQAVYRDGKNPTFWCSIGVLYYQINQ 344
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
Y D+L+ + + + P + EV Y + +LYE
Sbjct: 345 YRDALDAYSRAIRLNPYISEVWYDLGTLYE 374
>gi|110636430|ref|YP_676637.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279111|gb|ABG57297.1| TPR repeat containing protein [Cytophaga hutchinsonii ATCC 33406]
Length = 466
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 113 NFSNGYNWCVQSIR-NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSA 168
NF N ++I NS H +L + V ++ + +++D K D + A
Sbjct: 149 NFEESINHLKEAIMLNSQHEDAIYELSYSLEV----LDRLEESIDFFKQLIEKDPYSHFA 204
Query: 169 ATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD 228
L YF QG++++A E + S+A+ N+G C + + +Y K E + +D
Sbjct: 205 WFCLGVSYFKQGKLDEALDAYEFVIAINDKYSSAYYNIGECYVYKNEYEKALEYFFQTMD 264
Query: 229 NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA 275
+ + YN+G ++HL + ++E + K E Y I
Sbjct: 265 MEDKTADVFYNIGFCYEHLGMHPKAIEFYRKASKADAYFHEAYYGIG 311
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 145 FLRMNDVSQAVDVLKSCDEM---TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
++ N+ +A++ +M T+ N+ F Y G +A + +A AD Y
Sbjct: 246 YVYKNEYEKALEYFFQTMDMEDKTADVFYNIGFCYEHLGMHPKAIEFYRKASKADAYFHE 305
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A+ +G C A++ + + AL D E A SLE F +
Sbjct: 306 AYYGIGKCLEAQDKSYESIHFFKRALKLDEANAEYWLAKANAEYKTGNIISSLEAFEEAC 365
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ PS PEV + ++ +GD+++A D+
Sbjct: 366 VLEPSNPEVWKNWSFVHYESGDMDKAIDL 394
>gi|312102627|ref|XP_003149957.1| TPR Domain containing protein [Loa loa]
Length = 223
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 2 ERP-----EEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFG 56
E+P EEK +MEQ++ L+ ES D K ALEKAK A +ER ++K++EQ
Sbjct: 5 EKPPEKSNEEKCRQMEQKVNELLKESIFAWEKGDMKQALEKAKEAGRRERTIVKMREQLS 64
Query: 57 HADSHNIELTFS---NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDN 113
+ N++LTF+ N+ + A + +AL+ +K+ K S +L A
Sbjct: 65 IVEQLNLDLTFTVLFNLAHQYMANNLLTEALNTYQMIVKN---KMFANSGRLKANIANIY 121
Query: 114 FSNG--------YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMT 165
F Y + I NS ++ + + N V F++ + +A + C
Sbjct: 122 FKQKDYKKAIKLYQIALDQIPNSQKNTRIKIMN-NIGVAFIKCGEYDEADSTFEHCMNEK 180
Query: 166 SSAATNLSFI 175
+ T L+FI
Sbjct: 181 GNYNTALNFI 190
>gi|322705241|gb|EFY96828.1| transcriptional corepressor Cyc8 [Metarhizium anisopliae ARSEF 23]
Length = 860
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E++ +AD ++ ++ LG C MA++ Y K E Y A+ D ++G+ + +N+
Sbjct: 287 EKSVSADNQDAQSWYLLGRCYMAQQKYPKAYEAYQQAVYRDGKNPTFWCSIGVLYYQINQ 346
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
Y D+L+ + + + P + EV Y + +LYE
Sbjct: 347 YRDALDAYSRAIRLNPYISEVWYDLGTLYE 376
>gi|408790965|ref|ZP_11202576.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408464994|gb|EKJ88718.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 700
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTSSAATNL---SFIYFLQGEVEQAEKMAEEA---CTA 195
A FL M + A+ LK + S +L S +Y+ +GE+ +AE +
Sbjct: 361 ADAFLSMGQTNMAITALKKALLLKPSDVDSLFALSELYYKKGELVEAESLFRRIIRLTPG 420
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
DTY+ A+VNLG E Y + + AL + A YNLGLA+ H + + ++E
Sbjct: 421 DTYSETAYVNLGIILDEMERYSESITSFEGALALNPKNQSAYYNLGLAYLHAGKPTMAIE 480
Query: 256 CFHKLQAIVPSMPEVLYQIASLY 278
K QA+ P+ + IA Y
Sbjct: 481 SLRKSQALDPNHTQSRLAIADYY 503
>gi|302657152|ref|XP_003020305.1| hypothetical protein TRV_05603 [Trichophyton verrucosum HKI 0517]
gi|291184125|gb|EFE39687.1| hypothetical protein TRV_05603 [Trichophyton verrucosum HKI 0517]
Length = 1131
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q EQA + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 329 LGWLYHQQNNNYSSQEQAIEYLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 388
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 389 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 440
>gi|398410349|ref|XP_003856528.1| hypothetical protein MYCGRDRAFT_66803 [Zymoseptoria tritici IPO323]
gi|339476413|gb|EGP91504.1| hypothetical protein MYCGRDRAFT_66803 [Zymoseptoria tritici IPO323]
Length = 882
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 285 EQAIEYLEKSVNSDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 344
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 345 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 381
>gi|341877740|gb|EGT33675.1| hypothetical protein CAEBREN_09711 [Caenorhabditis brenneri]
Length = 1297
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACT---ADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
A +L+ +F +GE E+A +A A T D+ + AF +G C ++ Y + Y
Sbjct: 435 ALVHLANHFFFKGETERAWTLAWHAATFNECDSIKAEAFYQMGRCRHSQGQYEGAYKYYY 494
Query: 225 HALD-NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
A N+ A Y LG + H NE D+++CF + +P+ + + + SLY
Sbjct: 495 QARQANNGEHTLAHYGLGQMYIHRNEIEDAIKCFETVHQRLPNNVDTMKILGSLY 549
>gi|302502182|ref|XP_003013082.1| hypothetical protein ARB_00627 [Arthroderma benhamiae CBS 112371]
gi|291176644|gb|EFE32442.1| hypothetical protein ARB_00627 [Arthroderma benhamiae CBS 112371]
Length = 1171
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q EQA + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 330 LGWLYHQQNNNYSSQEQAIEYLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 389
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 390 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 441
>gi|326485017|gb|EGE09027.1| transcriptional corepressor Cyc8 [Trichophyton equinum CBS 127.97]
Length = 1175
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q EQA + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 330 LGWLYHQQNNNYSSQEQAIEYLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 389
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 390 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 441
>gi|326475991|gb|EGE00001.1| transcriptional corepressor Cyc8 [Trichophyton tonsurans CBS
112818]
Length = 1165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q EQA + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 330 LGWLYHQQNNNYSSQEQAIEYLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 389
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 390 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 441
>gi|425765902|gb|EKV04543.1| Transcriptional corepressor Cyc8, putative [Penicillium digitatum
PHI26]
gi|425779237|gb|EKV17313.1| Transcriptional corepressor Cyc8, putative [Penicillium digitatum
Pd1]
Length = 1267
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q Q+++ A E++ AD ++ ++ LG C M+ Y K E Y A+
Sbjct: 276 LGWLYHQQSNAFQSQEKAIQFLEKSVNADNNDAQSWYLLGRCYMSMAKYPKAYEAYQQAV 335
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 336 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 387
>gi|396463815|ref|XP_003836518.1| hypothetical protein LEMA_P040540.1 [Leptosphaeria maculans JN3]
gi|312213071|emb|CBX93153.1| hypothetical protein LEMA_P040540.1 [Leptosphaeria maculans JN3]
Length = 890
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 283 EQAIEYLEKSVASDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 342
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 343 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 379
>gi|327303998|ref|XP_003236691.1| transcriptional corepressor Cyc8 [Trichophyton rubrum CBS 118892]
gi|326462033|gb|EGD87486.1| transcriptional corepressor Cyc8 [Trichophyton rubrum CBS 118892]
Length = 1160
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q EQA + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 330 LGWLYHQQNNNYSSQEQAIEYLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 389
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 390 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 441
>gi|119510182|ref|ZP_01629320.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
gi|119465132|gb|EAW46031.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
Length = 304
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 4/162 (2%)
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNS 200
+A+ R+ D A D ++A NL G+++ A +A AD +
Sbjct: 52 QAIQAGRLQDAIAAFQQATQLDPNLATAHYNLGLALRQTGKLKPAADAFYQATQADPQFA 111
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
AF NLG + + + + A++ D A YNLGL + ++ ++ F K
Sbjct: 112 PAFANLGGALLEGSNLQQASDYLERAIELDPKLGFAHYNLGLVRQQQQDWERAIASFKKA 171
Query: 261 QAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND 302
+ PE Y + + Y G V QA D +A++N+
Sbjct: 172 MEYSKNAPEPPYHLGTSYLQQGKVNQARDA----FFQAIKNN 209
>gi|451996468|gb|EMD88935.1| hypothetical protein COCHEDRAFT_1182453 [Cochliobolus
heterostrophus C5]
Length = 999
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 423 EQAIEYLEKSVASDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 482
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 483 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 519
>gi|449299094|gb|EMC95108.1| hypothetical protein BAUCODRAFT_72030 [Baudoinia compniacensis UAMH
10762]
Length = 809
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 252 EQAIEYLEKSVASDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 311
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 312 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 348
>gi|452846933|gb|EME48865.1| hypothetical protein DOTSEDRAFT_67808 [Dothistroma septosporum
NZE10]
Length = 880
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 279 EQAIEYLEKSVNSDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 338
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 339 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 375
>gi|452989181|gb|EME88936.1| hypothetical protein MYCFIDRAFT_149523 [Pseudocercospora fijiensis
CIRAD86]
Length = 872
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 282 EQAIEYLEKSVASDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 341
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 342 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 378
>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 2315
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
S A TNL FIY+LQG+ +A +++ D F NLG + + K+ Y
Sbjct: 2165 SYALTNLGFIYYLQGDYSKAISFYQQSIEIDPSMHHGFNNLGLIYQHQGLAEQAKQQYEK 2224
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
AL +AL NLG + + D++E + K Q + P E + +Y+ G V
Sbjct: 2225 ALQILPNFAQALNNLGSIYYKNGKIEDAIEYYKKAQQVDPQFLEPYKSLGYIYQKIGMVV 2284
Query: 286 QASDVNENL 294
+A ++ + L
Sbjct: 2285 EAKNMLDQL 2293
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN 229
+N++ ++F+ G E+++ E+ +S A NLG + DY K Y +++
Sbjct: 2135 SNIALLHFMNGNTEESKICFEKTLKIKPDHSYALTNLGFIYYLQGDYSKAISFYQQSIEI 2194
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
D + NLGL ++H + + + K I+P+ + L + S+Y G +E A
Sbjct: 2195 DPSMHHGFNNLGLIYQHQGLAEQAKQQYEKALQILPNFAQALNNLGSIYYKNGKIEDA 2252
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVK-GKELYVHALDNDATC 233
IY Q +QA K ++A A +NLGN ++ VK E + ALD +
Sbjct: 1867 IYDQQNMKDQAIKQYQKALEIQPSYYTALLNLGNLYFWDKNMVKEANECFQKALDINPNS 1926
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNEN 293
++ L L + N++ ++++ + K +I P E+ +A +Y G++++A + E
Sbjct: 1927 LQVLKRAALFYYSNNQFQEAIQNYEKALSIDPQDYEIFGCLAQVYHQIGNIQKAIKILEK 1986
Query: 294 LLLEAVRNDALSQLHRE---------MKHEAEKCILTSAKL 325
+ + RN Q H + +K+EA +C L + ++
Sbjct: 1987 AIKQNPRN---HQFHYDLGNYSSEVGLKNEAIQCYLNALEI 2024
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 30/234 (12%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDA 231
L+ +Y G +++A K+ E+A + N +LGN + + + Y++AL+ +
Sbjct: 1967 LAQVYHQIGNIQKAIKILEKAIKQNPRNHQFHYDLGNYSSEVGLKNEAIQCYLNALEINP 2026
Query: 232 TCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVN 291
+AL NLG + + ++ CF K+ P L Q+ L G +E+A D
Sbjct: 2027 EFYQALNNLGGEYIFMERLEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEEAKDYL 2086
Query: 292 ENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHS 351
+ L L+ + ++A I + + E F WC ++++ + +S
Sbjct: 2087 QKCL-----------LNNNLDYDACNGIAQCYEALGMIEEAIF-----WCEKALKINPNS 2130
Query: 352 SLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMT-------SSAATNLSFIYFL 398
D+ N A+ + ++ K C E T S A TNL FIY+L
Sbjct: 2131 V---DVLSNIALLHFMNGNTEES----KICFEKTLKIKPDHSYALTNLGFIYYL 2177
>gi|345565031|gb|EGX47987.1| hypothetical protein AOL_s00081g314 [Arthrobotrys oligospora ATCC
24927]
Length = 836
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y + +++++A E++ AD ++ ++ LG C M+++ Y K E Y A+
Sbjct: 264 LGWLYHQRSASYESQEIAIEHLEKSVRADNTDAQSWYLLGRCYMSQQKYPKAYEAYQQAV 323
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 324 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 375
>gi|427723910|ref|YP_007071187.1| hypothetical protein Lepto7376_2051 [Leptolyngbya sp. PCC 7376]
gi|427355630|gb|AFY38353.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 441
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
++ +GE +A K E A T D + A G+ + E K +E Y +A D T +E
Sbjct: 69 FYQRGEFPRANKYVEVALTFDPWMPMAHYLQGHLFLEAEKPKKAQEAYANATQFDPTFVE 128
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
A YNLGL L + + ++ F + + P + +Q+A Y++ G
Sbjct: 129 AYYNLGLVSYDLGDINSAIAAFGEAIRLEPEFVDAYFQLALAYDVQG 175
>gi|451850868|gb|EMD64169.1| hypothetical protein COCSADRAFT_117238 [Cochliobolus sativus
ND90Pr]
Length = 858
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 282 EQAIEYLEKSVASDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 341
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 342 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 378
>gi|189200310|ref|XP_001936492.1| TPR repeat-containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983591|gb|EDU49079.1| TPR repeat-containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 870
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 282 EQAIEYLEKSVNSDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 341
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 342 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 378
>gi|406864006|gb|EKD17052.1| transcriptional corepressor [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 933
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 279 EQAIEYLEKSVGSDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 338
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 339 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 375
>gi|302821262|ref|XP_002992295.1| peptide N-acetylglucosaminyltransferase [Selaginella
moellendorffii]
gi|300139945|gb|EFJ06676.1| peptide N-acetylglucosaminyltransferase [Selaginella
moellendorffii]
Length = 933
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 19/205 (9%)
Query: 129 AHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQA 185
A S Q L ++K V + QA++ S D + A T +Y +G + +A
Sbjct: 114 AEPSCVQAL-VSKGVCLQMQGNARQALECFASALKLDPSNARALTQCGILYKEEGHLLEA 172
Query: 186 EKMAEEACTADT-YNSA------AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ ++A AD Y A ++G + G + Y AL DAT A Y
Sbjct: 173 SEAYQKALQADPKYKPALESLAVVLTDIGTSLKLSGNVHDGMQKYFEALRADATYAPAFY 232
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--- 295
NLG+ + + +Y +L C+ K A P E + +Y+ GD++ A E L
Sbjct: 233 NLGVVYSEMLQYDTALNCYEKAAAHRPMYAEAYCNMGVIYKNRGDLDAAIACYERCLAVS 292
Query: 296 --LEAVRND---ALSQLHREMKHEA 315
E +N+ AL+ L ++K E
Sbjct: 293 PNFEIAKNNMAIALTDLGTKVKLEG 317
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 18/201 (8%)
Query: 126 RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFI 175
+ +AH + + N V + D+ A+ + C ++ + A T+L
Sbjct: 253 KAAAHRPMYAEAYCNMGVIYKNRGDLDAAIACYERCLAVSPNFEIAKNNMAIALTDLGTK 312
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
L+G + Q ++A + + + A NLG + +Y AL + C E
Sbjct: 313 VKLEGNIHQGVAYYKKALLYNWHYADAMYNLGVAYGEMLKFDMAVVMYELALHFNPQCAE 372
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
A NLG+ +K + ++EC+ I P + L + +Y + G ++ AS + E +
Sbjct: 373 ACNNLGVIYKDRDNLDRAVECYQMALTIKPDFSQSLNNLGVVYTVQGKMDSASAMIEKAI 432
Query: 296 L------EAVRNDALSQLHRE 310
L EA N L LHR+
Sbjct: 433 LANPSYAEAYNN--LGVLHRD 451
>gi|212537145|ref|XP_002148728.1| transcriptional corepressor Cyc8, putative [Talaromyces marneffei
ATCC 18224]
gi|210068470|gb|EEA22561.1| transcriptional corepressor Cyc8, putative [Talaromyces marneffei
ATCC 18224]
Length = 841
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q E+A + E++ +AD ++ ++ LG C M+++ Y K E Y A+
Sbjct: 270 LGWLYHQQSTSYASQEKAIEYLEKSVSADNNDAQSWYLLGRCYMSQQKYPKAYEAYQQAV 329
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 330 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|242810020|ref|XP_002485495.1| transcriptional corepressor Cyc8, putative [Talaromyces stipitatus
ATCC 10500]
gi|218716120|gb|EED15542.1| transcriptional corepressor Cyc8, putative [Talaromyces stipitatus
ATCC 10500]
Length = 835
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q E+A + E++ +AD ++ ++ LG C M+++ Y K E Y A+
Sbjct: 270 LGWLYHQQSTSYASQEKAIEYLEKSVSADNNDAQSWYLLGRCYMSQQKYPKAYEAYQQAV 329
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 330 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|330928044|ref|XP_003302103.1| hypothetical protein PTT_13802 [Pyrenophora teres f. teres 0-1]
gi|311322715|gb|EFQ89794.1| hypothetical protein PTT_13802 [Pyrenophora teres f. teres 0-1]
Length = 877
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 282 EQAIEYLEKSVNSDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 341
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 342 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 378
>gi|255946255|ref|XP_002563895.1| Pc20g14170 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588630|emb|CAP86746.1| Pc20g14170 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 875
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q Q+++ A E++ AD ++ ++ LG C M+ Y K E Y A+
Sbjct: 282 LGWLYHQQSNAFQSQEKAIQFLEKSVNADNNDAQSWYLLGRCYMSMAKYPKAYEAYQQAV 341
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 342 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 393
>gi|225684617|gb|EEH22901.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 982
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 322 EQAIEYLEKSVKADNGDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 381
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 382 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 418
>gi|333980826|ref|YP_004518771.1| hypothetical protein Desku_3490 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824307|gb|AEG16970.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 211
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 151 VSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCA 210
V + V++L+S + ++A NL + QG +++A+ + EEA + T A+VNLG
Sbjct: 11 VEKQVNMLQS-NPGCATAKYNLGVMLMEQGRLDEAKTLFEEAISDGTRMFEAYVNLGYIY 69
Query: 211 MAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEV 270
+ + K +E A++ + NLG A+ + + +++E HK + P + +
Sbjct: 70 FKQGNLEKVEECNRKAVEIEPRYARGYANLGFAYLQMEKTDEAIEVLHKAIELNPRIVQA 129
Query: 271 LYQIASLYEITGDVEQASDVNENLL 295
+A+ Y G++++A + N+ LL
Sbjct: 130 WCNLANAYLQKGELDRAIETNQKLL 154
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A NL +IYF QG +E+ E+ +A + + + NLG + E + E+ A+
Sbjct: 61 AYVNLGYIYFKQGNLEKVEECNRKAVEIEPRYARGYANLGFAYLQMEKTDEAIEVLHKAI 120
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + ++A NL A+ E ++E KL + P +A Y + GD+ +A
Sbjct: 121 ELNPRIVQAWCNLANAYLQKGELDRAIETNQKLLEMAPDFSLGHNNLACAYYLKGDMIRA 180
Query: 288 S 288
+
Sbjct: 181 A 181
>gi|434406176|ref|YP_007149061.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428260431|gb|AFZ26381.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 368
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 21/209 (10%)
Query: 88 HREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLE------INK 141
HR + + +L SA ++ PS++ Q+ +A +L Q L+ +
Sbjct: 72 HRRWQPKILSLLLVSASILYPSLQHPL------LAQTGNQAATDALNQGLQAIQTGKVQD 125
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
A+ F R QA + D + A NL G+++ A +A AD +A
Sbjct: 126 AIAFFR-----QATQL----DPTLAPAQYNLGLALRQAGQLQPAADAFYQATQADPQFAA 176
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
AF NLG + + + A++ + A YNLGL + ++ ++ F K
Sbjct: 177 AFANLGGALLEGNNLQLANDYLQRAIELEPKLGFAHYNLGLLGEQQKDWQKAIASFKKAT 236
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ PE Y + Y G ++QA +
Sbjct: 237 EYSQNAPEPAYHLGVSYLQQGKIDQAKEA 265
>gi|156044402|ref|XP_001588757.1| hypothetical protein SS1G_10304 [Sclerotinia sclerotiorum 1980]
gi|154694693|gb|EDN94431.1| hypothetical protein SS1G_10304 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1043
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 278 EQAIEYLEQSVGSDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 337
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 338 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 374
>gi|239610445|gb|EEQ87432.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis ER-3]
gi|327349127|gb|EGE77984.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis ATCC
18188]
Length = 984
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 319 EQAIEYLEKSVKADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 378
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 379 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 415
>gi|261195576|ref|XP_002624192.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis
SLH14081]
gi|239588064|gb|EEQ70707.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis
SLH14081]
Length = 983
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 318 EQAIEYLEKSVKADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 377
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 378 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 414
>gi|71001670|ref|XP_755516.1| transcriptional corepressor Cyc8 [Aspergillus fumigatus Af293]
gi|66853154|gb|EAL93478.1| transcriptional corepressor Cyc8, putative [Aspergillus fumigatus
Af293]
gi|159129583|gb|EDP54697.1| transcriptional corepressor Cyc8, putative [Aspergillus fumigatus
A1163]
Length = 867
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q E+A + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 270 LGWLYHQQSNSYASQEKAIEYLEKSVSADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 329
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 330 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|315637376|ref|ZP_07892591.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478350|gb|EFU69068.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 503
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 107 APSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS 166
A I+D SN YN ++N EI++A R +A+ + D+ S
Sbjct: 330 AIKIDDKNSNTYNNLALLLKNKG--------EIDEAEKLYR-----EAIKI----DDKNS 372
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
+ NL+ + +GE+++AEK+ +EA D NS A+ NL + + + ++LY A
Sbjct: 373 NTYNNLALLLANKGEIDEAEKLYKEAIKIDDKNSKAYNNLAFLLSEKGEIGEAEKLYREA 432
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
+ D + YNL L K+ + ++ + + + I +V +A L GD+++
Sbjct: 433 IKIDDKDSDIYYNLALLLKNKGDIDEAEKLYREAIKIDDKDLDVYNNLAVLLANKGDIDE 492
Query: 287 A 287
A
Sbjct: 493 A 493
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 30/243 (12%)
Query: 160 SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
D+ S A NL+F+ +GE+++AEK+ EA D NS A+ NL RE+ +
Sbjct: 196 KIDDKYSKAYNNLAFLLSEKGEIDEAEKLYREAIKIDDKNSKAYNNLAFLLSEREEIDEA 255
Query: 220 KELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++LY A+ D NL L + E ++ + + + I + +A L
Sbjct: 256 EKLYREAIKIDDKNSNTYNNLALLLANKGEIDEAEKLYKEAIKIDDKYSKAYNNLAVLLS 315
Query: 280 ITGDVEQASDVNENLLLEAVRND-----ALSQLHREMKHEAEKCILTSAKLI--APSIED 332
G++++A E L EA++ D + L +K++ E I + KL A I+D
Sbjct: 316 EKGEMDEA----EKLFREAIKIDDKNSNTYNNLALLLKNKGE--IDEAEKLYREAIKIDD 369
Query: 333 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNL 392
SN YN + N A+ L +A+ + D+ S A NL
Sbjct: 370 KNSNTYNNLALLLANKGEIDEAEKL-------------YKEAIKI----DDKNSKAYNNL 412
Query: 393 SFI 395
+F+
Sbjct: 413 AFL 415
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 26/229 (11%)
Query: 74 KNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSL 133
KN++A N A RE EAEK + K I+D SN YN + N
Sbjct: 234 KNSKAYNNLAFLLSEREEIDEAEKLYREAIK-----IDDKNSNTYNNLALLLANKGEIDE 288
Query: 134 AQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
A+ L +A+ + D+ S A NL+ + +GE+++AEK+ EA
Sbjct: 289 AEKL-------------YKEAIKI----DDKYSKAYNNLAVLLSEKGEMDEAEKLFREAI 331
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
D NS + NL + + + ++LY A+ D NL L + E ++
Sbjct: 332 KIDDKNSNTYNNLALLLKNKGEIDEAEKLYREAIKIDDKNSNTYNNLALLLANKGEIDEA 391
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND 302
+ + + I + +A L G++ +A E L EA++ D
Sbjct: 392 EKLYKEAIKIDDKNSKAYNNLAFLLSEKGEIGEA----EKLYREAIKID 436
>gi|119481239|ref|XP_001260648.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
NRRL 181]
gi|119408802|gb|EAW18751.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
NRRL 181]
Length = 871
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q E+A + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 270 LGWLYHQQSNSYASQEKAIEYLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 329
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 330 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|389638314|ref|XP_003716790.1| hypothetical protein MGG_03196 [Magnaporthe oryzae 70-15]
gi|351642609|gb|EHA50471.1| RCM-1 [Magnaporthe oryzae 70-15]
gi|440465118|gb|ELQ34458.1| hypothetical protein OOU_Y34scaffold00765g4 [Magnaporthe oryzae
Y34]
gi|440480509|gb|ELQ61169.1| hypothetical protein OOW_P131scaffold01199g50 [Magnaporthe oryzae
P131]
Length = 923
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + E++ AD ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 278 ERAIEYLEQSVAADNSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 337
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 338 LYYQINQYRDALDAYSRAIRLNPYLSEVWYDLGTLYE 374
>gi|408399769|gb|EKJ78862.1| hypothetical protein FPSE_01005 [Fusarium pseudograminearum CS3096]
Length = 878
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L +++ Q +++ A E++ AD ++ ++ LG C M+++ Y K E Y A+
Sbjct: 265 LGWLHHQQSNTYESQDRAIQYLEKSVNADNQDAQSWYLLGRCYMSQQKYPKAYEAYQQAV 324
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 325 YRDGKNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 376
>gi|347835423|emb|CCD49995.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1052
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 300 EQAIEYLEQSVGSDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 359
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 360 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 396
>gi|238496501|ref|XP_002379486.1| transcriptional corepressor Cyc8, putative [Aspergillus flavus
NRRL3357]
gi|220694366|gb|EED50710.1| transcriptional corepressor Cyc8, putative [Aspergillus flavus
NRRL3357]
Length = 869
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q E+A + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 270 LGWLYHQQSNSYASQEKAIEYLEKSVSADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 329
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 330 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|170078681|ref|YP_001735319.1| hypothetical protein SYNPCC7002_A2078 [Synechococcus sp. PCC 7002]
gi|169886350|gb|ACB00064.1| TPR domain containing protein [Synechococcus sp. PCC 7002]
Length = 318
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYF 177
+Q+ + ++ A ++++ + ++ ++ A+ + + D + A NL
Sbjct: 47 ALQTWPSITPTTPAAKAKLSEGLALIQQGNLDGAIAQFQQAIALDPLLWQAHYNLGLALG 106
Query: 178 LQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
+G++ A + E + A+ NLG + +++ + + AL D A
Sbjct: 107 QRGDLPSAAQAFLETIALQPNFAVAYGNLGGVLIDSQNWPQAETYLRRALSLDPNLAIAH 166
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLE 297
YNLGL ++H +++ + K + + P+ P+ Q+A LY + GD +A+ + L+ E
Sbjct: 167 YNLGLIYRHQGNRDAAIQAWQKARELAPNFPDATIQLAELY-LAGDRPEAA---QPLIQE 222
Query: 298 AVRNDALSQLHREMKHEAEKCILT 321
++ SQL+ H + +LT
Sbjct: 223 LLK----SQLNLAAVHYLQGRLLT 242
>gi|169774883|ref|XP_001821909.1| transcriptional corepressor Cyc8 [Aspergillus oryzae RIB40]
gi|83769772|dbj|BAE59907.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868927|gb|EIT78136.1| TPR repeat protein [Aspergillus oryzae 3.042]
Length = 869
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q E+A + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 270 LGWLYHQQSNSYASQEKAIEYLEKSVSADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 329
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 330 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|342874074|gb|EGU76147.1| hypothetical protein FOXB_13319 [Fusarium oxysporum Fo5176]
Length = 857
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L +++ Q +++ A E++ AD ++ ++ LG C M+++ Y K E Y A+
Sbjct: 252 LGWLHHQQSNTYESQDRAIQYLEKSVGADNQDAQSWYLLGRCYMSQQKYPKAYEAYQQAV 311
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 312 YRDGKNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 363
>gi|296412888|ref|XP_002836151.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629958|emb|CAZ80342.1| unnamed protein product [Tuber melanosporum]
Length = 818
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E++ +AD ++ ++ LG C M+++ Y K E Y A+ D ++G+ + +N+
Sbjct: 285 EKSVSADNSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQ 344
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
Y D+L+ + + + P + EV Y + +LYE
Sbjct: 345 YRDALDAYSRAIRLNPYISEVWYDLGTLYE 374
>gi|115383886|ref|XP_001208490.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196182|gb|EAU37882.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 870
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQ----GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q E+A + E++ +AD ++ ++ LG C M++ Y K E Y A+
Sbjct: 270 LGWLYHQQSNSYASQEKAIEYLEKSVSADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAV 329
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 330 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|253702417|ref|YP_003023606.1| hypothetical protein GM21_3831 [Geobacter sp. M21]
gi|251777267|gb|ACT19848.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 1034
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ A NL + +GE E A E+A A+ NLG+C E+ + ELY
Sbjct: 631 ADAHNNLGTLLVARGEHEGALPFFEKALELREGYLPAYANLGSCLQVLEEPERAVELYRR 690
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
A+ D EA NLG A++ L + ++E + +L + P PE + +A GD +
Sbjct: 691 AIALDPGFFEARINLGTAYQDLMQPEKAIEVYRELLELAPEHPEAHWNLALSLLSVGDFK 750
Query: 286 QA 287
+
Sbjct: 751 RG 752
>gi|326428532|gb|EGD74102.1| kinesin light chain isoform 1 [Salpingoeca sp. ATCC 50818]
Length = 431
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 55/228 (24%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEA----- 192
E +KA+ F ++ V+ L T+S NL Y+ +GE ++A E+A
Sbjct: 25 EYDKAIAFYE-KALAITVETLGEKHPSTASTYNNLGSAYYSKGEYDKAIAFYEKALAITV 83
Query: 193 --------CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL--------DNDATCIEA 236
TADTYN NLG+ ++ D+ K + AL + + +
Sbjct: 84 ETLGEKHPSTADTYN-----NLGSTYGSKGDFDKAVVCFEKALAIQAETLGEKHPSTATS 138
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQIASLYEITGDVEQAS 288
+LG+A+KH EY ++ + K AI PS+ + I LY+ GD EQA
Sbjct: 139 YGSLGVAYKHKGEYDRAIAFYEKDLAITVEALGEKHPSVATSYFNIGLLYDKRGDKEQAC 198
Query: 289 -------DVNENLL-------------LEAVRNDALSQLHREMKHEAE 316
DV L L +R A+++ H +H +E
Sbjct: 199 AYIQHALDVFATTLGPDHPHTLKAERNLRRIRGGAVTRQHTSTQHVSE 246
>gi|145232151|ref|XP_001399530.1| transcriptional corepressor Cyc8 [Aspergillus niger CBS 513.88]
gi|134056441|emb|CAL00608.1| unnamed protein product [Aspergillus niger]
gi|350634462|gb|EHA22824.1| hypothetical protein ASPNIDRAFT_55546 [Aspergillus niger ATCC 1015]
Length = 858
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + E++ +AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 285 EKAIEFLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 344
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 345 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|358365676|dbj|GAA82298.1| transcriptional corepressor Cyc8 [Aspergillus kawachii IFO 4308]
Length = 858
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + E++ +AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 285 EKAIEFLEKSVSADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 344
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 345 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 381
>gi|332980817|ref|YP_004462258.1| hypothetical protein Mahau_0218 [Mahella australiensis 50-1 BON]
gi|332698495|gb|AEE95436.1| Tetratricopeptide TPR_1 repeat-containing protein [Mahella
australiensis 50-1 BON]
Length = 230
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 119 NWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKS-CDEM-TSSAATNLSFIY 176
NW + I +++A+T ++ ++ +A+++L++ C E + + L++ Y
Sbjct: 71 NWTIDKIAR-----------VDRALTQWKLGNLDRAIEILEAVCQEYERADSFATLAYFY 119
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
L+G+ E+A E+A + + A N G + DY K KE + ALD ++
Sbjct: 120 ILKGDYEKAALYNEKALEEEEDHPPALDNYGQMYYRQGDYEKAKEYFQKALDKKPNLPDS 179
Query: 237 LYNLGLAHKHLNEYSDSLECFHK-LQAIVPSMPEVLYQ 273
LY +G ++LE +K LQ+ + + V Q
Sbjct: 180 LYYMGCIAAEQGRRDEALEYLNKALQSPIRPLNTVTRQ 217
>gi|161529126|ref|YP_001582952.1| hypothetical protein Nmar_1618 [Nitrosopumilus maritimus SCM1]
gi|160340427|gb|ABX13514.1| TPR repeat-containing protein [Nitrosopumilus maritimus SCM1]
Length = 241
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 175 IYFLQ--GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
IY L+ GE +Q K+ EE +++ +S A ++G + + E Y AL D T
Sbjct: 79 IYALESLGEYQQVLKLCEEILSSNPKDSWALNSMGLSLNESNQHKEALEYYEKALAIDPT 138
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ AL N ++H HL +Y ++E + K Q + S+ E+ + L+E GD + A
Sbjct: 139 DVTALMNKAISHSHLGDYEVAVEFYDKAQMVDSSLKEIPLAKSKLFEKLGDSDNA 193
>gi|302915463|ref|XP_003051542.1| hypothetical protein NECHADRAFT_99925 [Nectria haematococca mpVI
77-13-4]
gi|256732481|gb|EEU45829.1| hypothetical protein NECHADRAFT_99925 [Nectria haematococca mpVI
77-13-4]
Length = 880
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L +++ Q +++ A E++ AD ++ ++ LG C M+++ Y K E Y A+
Sbjct: 266 LGWLHHQQSNTYESQDRAIQYLEKSVNADNQDAQSWYLLGRCYMSQQKYPKAYEAYQQAV 325
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 326 YRDGKNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 377
>gi|440635242|gb|ELR05161.1| hypothetical protein GMDG_07202 [Geomyces destructans 20631-21]
Length = 933
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 296 EQAIEYLEKSVNSDNNDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 355
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 356 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 392
>gi|310794486|gb|EFQ29947.1| tetratricopeptide [Glomerella graminicola M1.001]
Length = 885
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + E++ AD ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 278 ERAIEFLEKSVAADQGDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 337
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 338 LYYQINQYRDALDAYSRAIRLNPFISEVWYDLGTLYE 374
>gi|154282041|ref|XP_001541833.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412012|gb|EDN07400.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 978
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 321 EQAIEYLEKSVKADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 380
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 381 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 417
>gi|149376328|ref|ZP_01894091.1| TPR repeat protein [Marinobacter algicola DG893]
gi|149359342|gb|EDM47803.1| TPR repeat protein [Marinobacter algicola DG893]
Length = 187
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 126 RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSFIYFLQGEV 182
R + + L QD ++AV LR D A D+ + D + NL I +G
Sbjct: 29 RQAREAELTQD--FSEAVALLRGGDSGNARDLFEQIHQADPERTGPLANLGIIALQEGNA 86
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG- 241
++AE + D +SAA +LG A + ++ + + LY AL+ D + A+ NL
Sbjct: 87 DEAEAYFRQVLERDPEHSAALTHLGVMAREQGEFEQAETLYRQALEADPGHLPAMLNLAI 146
Query: 242 LAHKHLNEYSDSLECFHKLQAIV 264
L +L ++L + + Q++
Sbjct: 147 LLDIYLGRLEEALPLYEQYQSLA 169
>gi|407928928|gb|EKG21768.1| Tetratricopeptide TPR-1 [Macrophomina phaseolina MS6]
Length = 848
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 54/97 (55%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + E++ +D ++ ++ LG C M+++ Y K E Y A+ D ++G+
Sbjct: 282 ERAIEYLEKSVASDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGV 341
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P++ EV Y + +LYE
Sbjct: 342 LYYQINQYRDALDAYSRAIRLNPNISEVWYDLGTLYE 378
>gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413]
gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 605
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
IY+ GE QA E A D + A+ N GN A Y K Y L+ + +
Sbjct: 190 IYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAYYALGAYQKAIADYNRTLEINPHQV 249
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNEN 293
A YN GL +LNEY + F+++ + + YQ +YE D + A +D N+
Sbjct: 250 GAYYNRGLISFYLNEYQQAFADFNQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADYNQA 309
Query: 294 LLLE---AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGY------NWCVQS 344
L L AV + +HR + + + +L+ ++ NF+ GY C+
Sbjct: 310 LQLNPELAVVYGVRANIHRHLG-DYPSALADGNRLL--QLQPNFAAGYCDRGTSRRCLGD 366
Query: 345 IRNSAHSSLAQDLEINKAVT 364
R A + Q L+IN +
Sbjct: 367 YR-GAITDYNQALQINPNIA 385
>gi|402577066|gb|EJW71023.1| hypothetical protein WUBG_18067, partial [Wuchereria bancrofti]
Length = 103
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
A+C++ALYNLG H+ +LECF+KL I+ + +VL Q+AS+YE+ + QA ++
Sbjct: 1 ASCLQALYNLGYVHRLQGNLELALECFYKLHNILLNNVQVLCQLASIYELLKNTAQAIEL 60
>gi|409083031|gb|EKM83388.1| hypothetical protein AGABI1DRAFT_110054 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1034
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q +++A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 225 LGWLYHQDGSSFQNQELAIQYLTKSLEADPSDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 284
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N++ D+L+ + + I P +PEV + + SLYE
Sbjct: 285 YRDGRNPTFWCSIGVLYFQINQFRDALDAYSRAIRINPYIPEVWFDLGSLYE 336
>gi|367054942|ref|XP_003657849.1| hypothetical protein THITE_2123973 [Thielavia terrestris NRRL 8126]
gi|347005115|gb|AEO71513.1| hypothetical protein THITE_2123973 [Thielavia terrestris NRRL 8126]
Length = 868
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGE----VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q + E+A + E++ AD ++ ++ LG C M + Y K E Y A+
Sbjct: 251 LGWLYHTQSQHFDSQERAIEYLEKSVAADNSDAQSWYLLGRCYMQMQKYPKAYEAYQQAV 310
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 311 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPWISEVWYDLGTLYE 362
>gi|301611744|ref|XP_002935393.1| PREDICTED: hypothetical protein LOC100485775 [Xenopus (Silurana)
tropicalis]
Length = 1702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 121/302 (40%), Gaps = 22/302 (7%)
Query: 18 LIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFG--HADSHNIELTFSNINRKKN 75
L++ + QDF ALE K + + IK+ G H E N+ N
Sbjct: 1362 LVNRGLLYLELQDFANALEDFKCVALRTPGDIKIHLVIGNCHQRLQQYEEAVQAFNQALN 1421
Query: 76 ARAVRNDA--------LSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN 127
+ +A + H+ +A++ L + L + GY Q +
Sbjct: 1422 ITPLSAEACIGRGNAYIEYGHQRGTAQAKRDFLRALHLSPSCVAARICLGYTLQAQGLFQ 1481
Query: 128 SA--HSSLAQDLEI-------NKAVTFLRMNDVSQAVDVLKSCDEMTSSAA--TNLSFIY 176
A H ++A D++ +A+ L++ D A+ + + ++ SA TN I+
Sbjct: 1482 QAWNHFTVALDIDPQSILGFEGRAIVSLQIGDTFAALQDMNAALKLCGSAQLLTNRGVIH 1541
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
G++ A + + A TAD S A+ N N + + + KE Y A+ D A
Sbjct: 1542 QFMGKLPNAMRDYQAAITADQDYSLAYFNAANLYLHNRQFTQAKEYYTRAVALDPANESA 1601
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLL 295
+ N G+ + L + +L F + ++ P + ASLY + A SD+++ L
Sbjct: 1602 VLNRGITNMLLQDAQAALHDFQLVLSLCPVSSAAYFNRASLYNTLQQYQWAESDISQALN 1661
Query: 296 LE 297
L+
Sbjct: 1662 LQ 1663
>gi|384493788|gb|EIE84279.1| hypothetical protein RO3G_08989 [Rhizopus delemar RA 99-880]
Length = 619
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D+ ++ ++ LG C MA ++Y K E Y A+ DA ++G+ + +N+Y D+L
Sbjct: 235 SDSNDAQSWYLLGRCYMAEQNYNKAYEAYQQAVYRDARNPTFWCSIGVLYYQINQYRDAL 294
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 295 DAYSRAIRLNPYISEVWYDLGTLYE 319
>gi|384501997|gb|EIE92488.1| hypothetical protein RO3G_17010 [Rhizopus delemar RA 99-880]
Length = 447
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D+ ++ ++ LG C MA ++Y K E Y A+ DA ++G+ + +N+Y D+L
Sbjct: 235 SDSNDAQSWYLLGRCYMAEQNYNKAYEAYQQAVYRDARNPTFWCSIGVLYYQINQYRDAL 294
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 295 DAYSRAIRLNPYISEVWYDLGTLYE 319
>gi|426201918|gb|EKV51841.1| hypothetical protein AGABI2DRAFT_190053 [Agaricus bisporus var.
bisporus H97]
Length = 1071
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q +++A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 225 LGWLYHQDGSSFQNQELAIQYLTKSLEADPSDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 284
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N++ D+L+ + + I P +PEV + + SLYE
Sbjct: 285 YRDGRNPTFWCSIGVLYFQINQFRDALDAYSRAIRINPYIPEVWFDLGSLYE 336
>gi|384495239|gb|EIE85730.1| hypothetical protein RO3G_10440 [Rhizopus delemar RA 99-880]
Length = 552
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y Q + MA + T +D+ ++ ++ LG C M ++Y K E Y A+
Sbjct: 207 LGWLYHQQNTTFCNQSMAIQYLTRSLKSDSTDAQSWYLLGRCYMVEQNYNKAYEAYQQAV 266
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
DA ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 267 YRDARNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 318
>gi|393218996|gb|EJD04484.1| hypothetical protein FOMMEDRAFT_19703 [Fomitiporia mediterranea
MF3/22]
Length = 1356
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIY 176
C I + S LA D+ + + D +A D + + + A L ++Y
Sbjct: 275 CFDRILRNPPSPLAHADIWFQIGHVYEQQKDYMRAKDAYERVVQENPAHAKVLQQLGWLY 334
Query: 177 FLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
+G Q++ +A ++ AD ++ ++ LG MA + Y K E Y A+ D
Sbjct: 335 HQEGSAFQSQDLAITYLTKSLEADPSDAQSWYLLGRAYMAGQKYNKAYEAYQQAVYRDGR 394
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++G+ + +N+Y D+L+ + + I P + EV + + SLYE
Sbjct: 395 NPTFWCSIGVLYFQINQYRDALDAYSRAIRINPYISEVWFDLGSLYE 441
Score = 43.5 bits (101), Expect = 0.21, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVN 291
E L+ LG+ +K +Y+DSL+CF ++ PS ++ +QI +YE D +A D
Sbjct: 254 EILFRLGIIYKQQGKYTDSLDCFDRILRNPPSPLAHADIWFQIGHVYEQQKDYMRAKDAY 313
Query: 292 ENLLLEAVRNDALSQLHREMK--HEAEKCILTSAKL----IAPSIEDNFSNGYNW 340
E ++ E N A +++ +++ + E S L + S+E + S+ +W
Sbjct: 314 ERVVQE---NPAHAKVLQQLGWLYHQEGSAFQSQDLAITYLTKSLEADPSDAQSW 365
>gi|406981036|gb|EKE02561.1| hypothetical protein ACD_20C00362G0010 [uncultured bacterium]
Length = 630
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATN---LSFIYFLQGEVEQAEKMAEEACTADTYNSAAF 203
+ ++ QA++ + E+ S + + L +Y+ Q ++++A K + A + D N+
Sbjct: 154 KTGNIPQAIENYRKAIEINSRSHKSYLALGILYYNQKQLDEANKELQNALSIDFNNTKIH 213
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI 263
LG A+E++ K + + + + IEA NLGLA+ L ++++ F A+
Sbjct: 214 FYLGLIYNAQENFEKAIAEFKYVVTFEPKNIEAYNNLGLAYGFLGWLEEAIQEFKTAIAL 273
Query: 264 VPSMPEVLYQIASLYEITGDVEQA 287
P PEV Y + +Y + + + A
Sbjct: 274 NPDNPEVRYALGYIYFMKKNYQYA 297
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 12/226 (5%)
Query: 74 KNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSL 133
KN A N L+ EA + T+ L + E ++ GY + ++ A L
Sbjct: 242 KNIEAYNNLGLAYGFLGWLEEAIQEFKTAIALNPDNPEVRYALGYIYFMKKNYQYAQIEL 301
Query: 134 --AQDLEINKAVTFLRMNDVSQAVDVLK-SCDEMT---------SSAATNLSFIYFLQGE 181
A L+ + +++L + V +D K + DE + NL+F G
Sbjct: 302 QTAIRLKPDHELSYLILGQVYAHLDRFKEAIDEYNEALKLNPNNPTTYYNLAFALNTLGM 361
Query: 182 VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
E+A + ++ + +A+++LGN ++ KE + A++ + EA Y+LG
Sbjct: 362 SEKATECYKKVIELNPAYLSAYLDLGNILLSNGQQDFAKECFEAAINRSSNFGEAYYSLG 421
Query: 242 LAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L + EY +L CF AI P++ + YQ +Y+ G++E A
Sbjct: 422 LCYIRSEEYQKALYCFDHAIAINPNLSDAYYQKGLIYKKDGNMELA 467
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
S A IY G +E A + E+A DT N+A++ +LG + K +
Sbjct: 448 SDAYYQKGLIYKKDGNMELAIENIEQAIKLDTENAASYNDLGLAYQILGNQEKAISAFKK 507
Query: 226 A--LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
A LD D + +NLG+A Y +S+ + + P ++ + +A++YE GD
Sbjct: 508 ASFLDPDNSLYR--HNLGIALFEGKRYKESIVELRRAIRLSPYNADIYFNLANIYEKIGD 565
Query: 284 VEQASDVNENLLLEAVRNDALSQLHREMK 312
A D EN + D ++L+ +++
Sbjct: 566 YADAVDSYENFVKHNPEYDKKNELNSKIE 594
>gi|170578566|ref|XP_001894461.1| TPR Domain containing protein [Brugia malayi]
gi|158598938|gb|EDP36695.1| TPR Domain containing protein [Brugia malayi]
Length = 311
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
A+C++ALYNLG H+ +LECF+KL I+ + +VL Q+AS+YE+ + QA
Sbjct: 1 ASCLQALYNLGYVHRLQGNLELALECFYKLHNILLNNVQVLCQLASIYELLKNTAQA 57
>gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
Length = 125
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
++ A NL Y+ QG+ ++A + ++A D N++A+ NLGN + DY K E Y
Sbjct: 8 SAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQ 67
Query: 225 HALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
AL+ D +A Y G A+ +Y ++E + K + P+
Sbjct: 68 KALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPN 109
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 196 DTYNSA-AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D NSA A+ NLGN + DY K E Y AL+ D A YNLG A+ +Y ++
Sbjct: 4 DPGNSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAI 63
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E + K + P+ + Y+ + Y GD ++A
Sbjct: 64 EYYQKALELDPNNAKAWYRRGNAYYKQGDYQKA 96
Score = 41.6 bits (96), Expect = 0.68, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEM---TSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N + + D +A++ + E+ +SA NL Y+ QG+ ++A + ++A D
Sbjct: 14 NLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELD 73
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHK 245
N+ A+ GN + DY K E Y AL+ D +A NLG A +
Sbjct: 74 PNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLGNAKQ 122
>gi|389742135|gb|EIM83322.1| TPR-like protein [Stereum hirsutum FP-91666 SS1]
Length = 1081
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q+++ A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 210 LGWLYHQDGPEFQSQETAIQYLTKSLEADPSDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 269
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N++ D+L+ + + I P +PEV + + SLYE
Sbjct: 270 YRDGRNPTFWCSIGVLYFQINQFRDALDAYSRAIRINPYIPEVWFDLGSLYE 321
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM---PEVLYQIASLYEITGDVEQASDVN 291
E L+ LG+ +K +Y DSL CF ++ PS ++ +QI +YE GD +A +
Sbjct: 134 EVLFRLGIIYKQQTKYEDSLRCFDRILRNPPSPLAHADIWFQIGHVYEQQGDHRRAKESY 193
Query: 292 ENLLLE 297
E ++ E
Sbjct: 194 ERVVQE 199
>gi|242208374|ref|XP_002470038.1| predicted protein [Postia placenta Mad-698-R]
gi|220730938|gb|EED84788.1| predicted protein [Postia placenta Mad-698-R]
Length = 377
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIY 176
C I + S LA D+ F + D +A D + + + A L ++Y
Sbjct: 157 CFDRILRNPPSPLAHADIWFQIGHVFEQQRDHVRARDAYERVVQDNPNHAKVLQQLGWLY 216
Query: 177 FLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
G Q + +A + T AD ++ ++ LG MA + Y K E Y A+ D
Sbjct: 217 HQDGSSFQNQDVAIQYLTKSLEADPADAQSWYLLGRAYMAGQKYNKAYEAYQQAVYRDGR 276
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++G+ + +N+Y D+L+ + + I P + EV + + SLYE
Sbjct: 277 NPTFWCSIGVLYFQINQYRDALDAYSRAIRINPYISEVWFDLGSLYE 323
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM---PEVLYQIASLYEITGDVEQASDVN 291
E L+ LG+ +K +Y+DSLECF ++ PS ++ +QI ++E D +A D
Sbjct: 136 EILFRLGIIYKQQGKYADSLECFDRILRNPPSPLAHADIWFQIGHVFEQQRDHVRARDAY 195
Query: 292 ENLL 295
E ++
Sbjct: 196 ERVV 199
>gi|340522513|gb|EGR52746.1| predicted protein [Trichoderma reesei QM6a]
Length = 735
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIY 176
C + I NS L Q D+ + D A + + + + A L ++Y
Sbjct: 197 CFKYIVNSPPGPLTQEDIWFQIGHVHEQQKDFDGAKSAYQRVLDQSPNHAKVLQQLGWLY 256
Query: 177 FLQGEV----EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
Q E+ + E++ AD ++ ++ LG C M+++ Y K E Y A+ D
Sbjct: 257 HQQSPAYDSQERGIQYLEKSVAADNQDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGK 316
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
++G+ + +N+Y D+L+ + + + P + EV Y + +L
Sbjct: 317 NPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTL 361
>gi|435852070|ref|YP_007313656.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433662700|gb|AGB50126.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 1078
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 3/142 (2%)
Query: 134 AQDLEINKAVTFLRMNDVSQAV---DVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAE 190
++D +K + RM AV D L D + +F ++L+G+ +QA +
Sbjct: 848 SKDAIYHKGLALDRMGRYDDAVACYDQLLELDPSDTLVMGTKAFSFYLRGDYQQALAGFD 907
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
+ D + +A + G + Y Y L+ D TC+ A YN G + + +
Sbjct: 908 QVLAIDPTSVSAMYHKGTISYLVSSYKGSIYYYDKTLELDPTCVTAWYNKGFIYNLIGQV 967
Query: 251 SDSLECFHKLQAIVPSMPEVLY 272
S+ C+ AI PS VLY
Sbjct: 968 ETSISCYDSALAIDPSSRSVLY 989
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 223 YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
Y H LD +T ++Y+ G ++ + Y+DS+ F ++P P++ + A+ YE G
Sbjct: 189 YDHILDLFSTYANSMYDTGYSYLQVGRYNDSIASFDVALTMLPDDPKMWFARAAAYEAIG 248
Query: 283 DVEQA-SDVNENLLLEAVRNDAL 304
+ E A +D N L LE + +AL
Sbjct: 249 EYENALADYNNILKLEPLNAEAL 271
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+SA + F G +QA + A + D NS AF + G+ A E Y Y
Sbjct: 747 TSAMLQKGRVLFSTGSYDQALQYANTVISIDPENSQAFSDRGDAYYALEKYPDAASSYDQ 806
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY 272
AL+ D ++ LY +A++ L ++ ++ + K+ A P + +Y
Sbjct: 807 ALELDRGNVDILYKQSVAYEKLGQFDRAIGSYDKIIAEQPDSKDAIY 853
>gi|384497501|gb|EIE87992.1| hypothetical protein RO3G_12703 [Rhizopus delemar RA 99-880]
Length = 477
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D+ ++ ++ LG C M ++Y K E Y A+ DA ++G+ + +N+Y D+L
Sbjct: 226 SDSTDAQSWYLLGRCYMVEQNYNKAYEAYQQAVYRDARNPTFWCSIGVLYYQINQYRDAL 285
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P++ EV Y + +LYE
Sbjct: 286 DAYSRAIRLNPNISEVWYDLGTLYE 310
>gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120]
gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120]
Length = 605
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
IY+ GE QA E A D + A+ N GN A Y K Y L+ + +
Sbjct: 190 IYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINPHQV 249
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNEN 293
A YN GL +L+EY + F+++ P+ + YQ +YE D + A +D N++
Sbjct: 250 GAYYNRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADYNQS 309
Query: 294 LLLE---AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGY------NWCVQS 344
L L AV + ++R + + + +L+ ++ NF+ GY C+
Sbjct: 310 LQLNSELAVVYGVRANIYRHLG-DYPSALADGNRLL--ELQPNFAAGYCDRATSRRCLGD 366
Query: 345 IRNSAHSSLAQDLEINKAVT 364
R A + Q L+IN +
Sbjct: 367 YR-GAIADYNQALQINPNIA 385
>gi|183221520|ref|YP_001839516.1| hypothetical protein LEPBI_I2138 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
(TPR) domains [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 700
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTSSAATNL---SFIYFLQGEVEQAEKMAEEA---CTA 195
A FL M + A+ LK + S +L + +Y+ +GE+ +AE +
Sbjct: 361 ADAFLSMGQTNMAITALKKALLLKPSDVDSLFALAELYYKKGELVEAESLFRRIIRLTPG 420
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
DTY+ A+VNLG E Y + + AL + A YNLGL++ H + + ++E
Sbjct: 421 DTYSETAYVNLGIILDEMERYSESIAAFEGALSLNPKNQSAYYNLGLSYLHAGKPTMAIE 480
Query: 256 CFHKLQAIVPSMPEVLYQIASLY 278
K QA+ P+ IA Y
Sbjct: 481 SLRKSQALDPNHVPSRLAIADYY 503
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 9/171 (5%)
Query: 145 FLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQA----EKMAEEACTADT 197
F + D A++ K + S T NL+ Y QG + +A +K+ + A + T
Sbjct: 225 FQEIGDPQSAIEAYKEGQSLAPSDVTLTYNLAISYLKQGNLAEAISEFQKVVQTAPNSQT 284
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
++ +LG REDY + + + + +A YNLGL + ++ + F
Sbjct: 285 -AVLSYGHLGTIFYQREDYDRAEYYFREVIRLKTGDAKAYYNLGLVYLKKKVPEEAAKYF 343
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLLEAVRNDALSQL 307
K + PEV IA + G A + + + LLL+ D+L L
Sbjct: 344 QKALDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFAL 394
>gi|346972436|gb|EGY15888.1| glucose repression mediator protein CYC8 [Verticillium dahliae
VdLs.17]
Length = 892
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E++ AD ++ ++ LG C M+++ Y K E Y A+ D ++G+ + +N+
Sbjct: 276 EKSVAADQNDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQ 335
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
Y D+L+ + + + P + EV Y + +LYE
Sbjct: 336 YRDALDAYSRAIRLNPFISEVWYDLGTLYE 365
>gi|78189309|ref|YP_379647.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78171508|gb|ABB28604.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 471
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 200 SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHK 259
S+A+ N N + E Y L+ + I ALYNLG+A++ L Y D++EC+ +
Sbjct: 239 SSAWYNRANVLAITGRIQEAAESYEQTLELEPEDINALYNLGIAYEELERYPDAMECYRR 298
Query: 260 LQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA 303
IVP + + +A +E+ + ++A LEA++ A
Sbjct: 299 CITIVPEFGDAWFALACCHEVLEEFDEAYSAT----LEALKTSA 338
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 223 YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
Y ALD+D I A YN GL + Y ++L C+ AI Y A++ ITG
Sbjct: 194 YNTALDHDPYNINAWYNNGLVLSKMKHYDEALFCYDMALAIADDFSSAWYNRANVLAITG 253
Query: 283 DVEQASDVNENLL 295
+++A++ E L
Sbjct: 254 RIQEAAESYEQTL 266
>gi|333987462|ref|YP_004520069.1| hypothetical protein MSWAN_1251 [Methanobacterium sp. SWAN-1]
gi|333825606|gb|AEG18268.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 1161
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
+ N+ + + + D +A N + G+ E+A + EA + Y + +VN
Sbjct: 450 KFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPYFTEVYVNK 509
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ E+Y + E Y AL+ + EA YN G A +L +Y++S+ CF++ I P+
Sbjct: 510 GSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFNQSIEINPN 569
Query: 267 MPEVLYQIASLYEITGDVEQA 287
EV +E G A
Sbjct: 570 YGEVYNNKGVSFENLGKFNHA 590
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 18/179 (10%)
Query: 150 DVSQAVDVLKSCDEMTSSAATNLSFIYFLQG-------EVEQAEKMAEEACTADTYNSAA 202
D +A+DV ++T +F +G ++++A K + A D S A
Sbjct: 40 DYKRAIDVFDKIIQLTQDPKA-----WFYKGLALQNLKKIDEAIKCYDNAIKTDPNYSKA 94
Query: 203 FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQA 262
N G +Y K + + AL D E N GLA +L Y ++++ F+K
Sbjct: 95 LNNKGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGLALGYLGRYEEAIKSFNKAIN 154
Query: 263 IVPSMPEVLYQIASLYEITGDVEQASD-----VN-ENLLLEAVRNDALSQLHREMKHEA 315
P LY L E+A + +N +N +A+ N +S H E E+
Sbjct: 155 YEPKNIIFLYNKGELLRNLKRYEEAIESYDRIINIKNDFFDAILNKGISLAHLEKYDES 213
>gi|301123659|ref|XP_002909556.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262100318|gb|EEY58370.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 681
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A T D + + LG C MA +++ + + Y HA+ D+ +LG+ LN+
Sbjct: 262 KKAVTIDPQDGKGWYLLGRCYMAVQEFEEAYDSYKHAVTTDSQNPNVWCSLGVLFYQLNQ 321
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ D+L+ + + I P++ EV Y + +LY+ A D
Sbjct: 322 HLDALDAYSRAININPNICEVWYNVGTLYDTCNQTSDARDA 362
>gi|225563392|gb|EEH11671.1| transcriptional repressor [Ajellomyces capsulatus G186AR]
Length = 876
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 207 EQAIEYLEKSVKADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 266
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 267 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 303
>gi|386811837|ref|ZP_10099062.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404107|dbj|GAB61943.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 311
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Query: 153 QAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC 209
+A+ V K +M+ + A L +Y +G+ E A K A + A NLG
Sbjct: 125 EAISVFKKAVDMSPHHAEAYEGLGLVYVHKGQAEDAVKAFLRAIDINPGLVNARYNLGIL 184
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
+ + + + A++ + IE YNLG+ + L + +++ + K I P M
Sbjct: 185 YAKKAQFNEAIAEWTKAIEINPQKIEVYYNLGVGYTKLGKMDEAISVWQKALTIRPDMAN 244
Query: 270 VLYQIASLYEITGDVEQA 287
+ Y I +Y+ GD E+A
Sbjct: 245 LHYTIGLVYKEKGDFEKA 262
>gi|116747525|ref|YP_844212.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116696589|gb|ABK15777.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
Length = 567
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 22/277 (7%)
Query: 141 KAVTFLRMNDVSQA----VDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
KA FL M QA +DVL + + +A+ +L+++Y + ++ AE+ + +A+
Sbjct: 187 KARVFLDMKLYKQAEKIYLDVL-AIEPAFENASLDLAYVYEVTERLKDAEQTYLQILSAN 245
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
N A LGN M ++ + + H L + +E+ +G+ H +Y ++++
Sbjct: 246 PANVNARTRLGNLYMRQDRPAEALRHFSHLLKLNRKDVESRLKVGIIHLQQKDYEEAIKD 305
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAE 316
F L P + LY +AS Y D EQA N L+ + ++Q + +
Sbjct: 306 FTYLLKDEPQYDQALYYLASTYAEKQDFEQAIR-NFRLIARSSPLWPMAQTRLALIFSKQ 364
Query: 317 K------CILTSAKLIAPSIEDNF---------SNGYNWCVQSI-RNSAHSSLAQDLEIN 360
K +L A P + D + + Y V ++ R + DL
Sbjct: 365 KDFQNGAAVLKEAIDAQPEVADLYLYLGIIYEEAKQYEDGVAAVDRGLVKTPRDTDLLFR 424
Query: 361 KAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYF 397
K V +M+ A+ V+K E+ A L++I +
Sbjct: 425 KGVILDKMSRRDDAIAVMKRILEIEPQNANALNYIGY 461
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 145 FLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
++ + ++ +A++ D + T L+ + QG++EQA K+ E+A + D
Sbjct: 55 YVSVKEIDKAIEAYHEALKKDPRSPMLLTELAALLIRQGKIEQALKLTEDATSFDRTYEP 114
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A++ LG + + Y A++ + + +A LG + +Y +++E F L+
Sbjct: 115 AYMLLGQLYAGIGQNARAIDAYSRAIEINPSNEDAHLLLGALYAQEKKYDEAMEAFDHLK 174
Query: 262 AIVPSMPEVLYQIASLY 278
A++P P LY A ++
Sbjct: 175 ALLPDNPVALYYKARVF 191
>gi|402076639|gb|EJT72062.1| RCM-1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 895
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L +++ Q Q+++ A E++ A+ ++ ++ LG C M+++ Y K E Y A+
Sbjct: 264 LGWLHHNQSSSFQSQERAIEYLEKSVAAEANDAQSWYLLGRCYMSQQKYPKAYEAYQQAV 323
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 324 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 375
>gi|374630836|ref|ZP_09703221.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanoplanus
limicola DSM 2279]
gi|373908949|gb|EHQ37053.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanoplanus
limicola DSM 2279]
Length = 1075
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
+F QG E+A + E+A + N +G M Y + + ++ I
Sbjct: 24 HFEQGRYEEASRDLEKAIEIEPENGELCFKMGTALMHTGKYEDAERFFKRSVAASPDNIS 83
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
A +LG A + ++ +++C+ ++ ++ PS+ +V+Y+ A +E TGD A++ E LL
Sbjct: 84 AWQSLGNALYYRRDFKGAVQCYDRVLSMDPSVTDVIYKKAEAHESTGDFAGAAECCEKLL 143
>gi|428218502|ref|YP_007102967.1| hypothetical protein Pse7367_2276 [Pseudanabaena sp. PCC 7367]
gi|427990284|gb|AFY70539.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 418
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 146 LRMNDVSQAVDVLKSC----DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
+R+ DV A+ ++ MT+ A NL + G++++A A D
Sbjct: 172 IRLGDVEGAIKAFRAAVSKKPNMTA-AHYNLGLAFAQTGQLQEAINAFFRAAELDPTFPM 230
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
F NLG + + + + A++ A YNLG+A+K + ++++ + Q
Sbjct: 231 TFSNLGAALLQGGNPQQAVAYFQRAIELKPDLPIAHYNLGIAYKEQGQITEAIASLREAQ 290
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQA 287
+ P PE Y + L + +GD+++A
Sbjct: 291 KLYPQSPETNYNLGLLVQESGDLDEA 316
>gi|255073105|ref|XP_002500227.1| predicted protein [Micromonas sp. RCC299]
gi|226515489|gb|ACO61485.1| predicted protein [Micromonas sp. RCC299]
Length = 2297
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N A+ RM S+A LK ++ A NL ++ +G+V++AE+ + +
Sbjct: 1217 NIALVHARMGKRSEAKRYLKESIKVKHRALDAQFNLGMLFLREGDVDEAEQCFMKCLVIN 1276
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL---AHKHLNEYSDS 253
T +S + +GN M R + E Y+ AL++D +EA+ N+G+ A +H E
Sbjct: 1277 TRHSPSLCKMGNVQMLRGKPKRAVEKYLLALESDPDNVEAISNIGVVEWAKRHAVEAEQH 1336
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
K + P L+ I L G V++A++
Sbjct: 1337 FLLALKFK---PDYYPALFNIGLLCMEQGRVQEAAN 1369
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 3/187 (1%)
Query: 134 AQDLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAE 190
A D + N + FLR DV +A C + S + + + L+G+ ++A +
Sbjct: 1245 ALDAQFNLGMLFLREGDVDEAEQCFMKCLVINTRHSPSLCKMGNVQMLRGKPKRAVEKYL 1304
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
A +D N A N+G A+ V+ ++ ++ AL AL+N+GL
Sbjct: 1305 LALESDPDNVEAISNIGVVEWAKRHAVEAEQHFLLALKFKPDYYPALFNIGLLCMEQGRV 1364
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHRE 310
++ + K A PS E L+Q + G+++ + E + + + + E
Sbjct: 1365 QEAANWYRKAVARKPSSAEALFQFGTALHKLGELQGETPRREEKSAQQIAIEEEEKKRAE 1424
Query: 311 MKHEAEK 317
+ EA+K
Sbjct: 1425 DEREAKK 1431
>gi|156337187|ref|XP_001619820.1| hypothetical protein NEMVEDRAFT_v1g1996 [Nematostella vectensis]
gi|156203733|gb|EDO27720.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+++ LI+ESC ALEKAK A KER L + +EQ ++ N+
Sbjct: 44 PEEKVKQLEKKVNELIEESCFANAAGQLGLALEKAKEAGRKERSLCRQREQTALSEQINL 103
Query: 64 ELTFS 68
+LT+S
Sbjct: 104 DLTYS 108
>gi|295673993|ref|XP_002797542.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280192|gb|EEH35758.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 830
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 159 EQAIEYLEKSVKADNGDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSIGV 218
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 219 LYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 255
>gi|440789770|gb|ELR11067.1| glucose repression mediator protein, partial [Acanthamoeba
castellanii str. Neff]
Length = 426
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD + + LG C MA++ Y K + Y A++ D ++G+ + +N+Y D+L
Sbjct: 260 ADPSDGQTWYLLGRCYMAQQKYRKAYDAYQQAVNRDNRNPTFWCSIGVLYYQINQYRDAL 319
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+ + + + P + EV Y + +LYE + + D
Sbjct: 320 DAYSRAIRLNPYLSEVWYDLGTLYESCNQISDSLD 354
>gi|400594265|gb|EJP62121.1| tetratricopeptide-like protein [Beauveria bassiana ARSEF 2860]
Length = 867
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
AD ++ ++ LG C M+++ Y K E Y A+ D ++G+ + +N+Y D
Sbjct: 304 TAADNTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGKNPTFWCSIGVLYYQINQYRD 363
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYE 279
+L+ + + + P + EV Y + +LYE
Sbjct: 364 ALDAYSRAIRLNPYISEVWYDLGTLYE 390
>gi|171689182|ref|XP_001909531.1| hypothetical protein [Podospora anserina S mat+]
gi|170944553|emb|CAP70664.1| unnamed protein product [Podospora anserina S mat+]
Length = 846
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E++ AD ++ ++ LG C M ++ Y K E Y A+ D ++G+ + +N+
Sbjct: 241 EKSVAADNSDAQSWYLLGRCYMQQQKYPKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQ 300
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
Y D+L+ + + + P + EV Y + +LYE
Sbjct: 301 YRDALDAYSRAIRLNPFISEVWYDLGTLYE 330
>gi|456062461|ref|YP_007501431.1| TPR repeat-containing protein [beta proteobacterium CB]
gi|455439758|gb|AGG32696.1| TPR repeat-containing protein [beta proteobacterium CB]
Length = 493
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 125 IRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNL---SFIYFLQGE 181
+RN + LAQ A FL+ N++ A +L+ + +++ + L + I QG+
Sbjct: 1 MRNQVNFLLAQ------ATQFLQNNNLVSADLLLRQVLKASTNNSEALRLQAIILMQQGD 54
Query: 182 VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
E A E A AD N A N GN ++ + + Y A+ EA NLG
Sbjct: 55 PEGALLQIERAILADKKNGNAHSNKGNIQLSLNKPLDAIKSYKVAISLAPRNSEAHNNLG 114
Query: 242 LAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
A++ ++EY ++++C+ + I P+ E L + ++Y G ++QA
Sbjct: 115 NAYQEISEYEEAVKCYLRALTITPNNYEFLCNLGNVYWKLGFLDQA 160
>gi|156337966|ref|XP_001619931.1| hypothetical protein NEMVEDRAFT_v1g3720 [Nematostella vectensis]
gi|156204020|gb|EDO27831.1| predicted protein [Nematostella vectensis]
Length = 117
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 4 PEEKFERMEQEIIGLIDESCICARNQDFKAALEKAKLASNKERVLIKLQEQFGHADSHNI 63
PEEK +++E+++ LI+ESC ALEKAK A KER L + +EQ ++ N+
Sbjct: 25 PEEKVKQLEKKVNELIEESCFANAAGQLGLALEKAKEAGRKERSLCRQREQTALSEQINL 84
Query: 64 ELTFS 68
+LT+S
Sbjct: 85 DLTYS 89
>gi|409050977|gb|EKM60453.1| hypothetical protein PHACADRAFT_55115, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 378
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q +++A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 213 LGWLYHQDGSSFQNQELAIQYLTKSLEADPADAQSWYLLGRAYMAGQKYNKAYEAYQQAV 272
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + I P + EV + + SLYE
Sbjct: 273 YRDGRNPTFWCSIGVLYFQINQYRDALDAYSRAIRINPYISEVWFDLGSLYE 324
>gi|440681896|ref|YP_007156691.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428679015|gb|AFZ57781.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 145 FLRMNDVSQAVDVLKSCDEMTS--SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAA 202
F R ++ + VD+ ++ D +A +N I+++ G+ +A +A + SAA
Sbjct: 89 FQRGDNQAAIVDIKQALDYYPDFVAAYSNRGNIFYILGQYTEAIADYNQAIQLNPNLSAA 148
Query: 203 FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQA 262
+ N GN A +DY Y AL + EA YN GL HL +Y ++ F++
Sbjct: 149 YHNRGNSRYALKDYQGAIADYNQALAINPQFGEAYYNRGLIMSHLQDYQSAIADFNQAIQ 208
Query: 263 IVPSMPEVLYQIASLYEITGDVE-------QASDVNENL-LLEAVRNDALSQL 307
+ P + +Q +Y D E QA VN L ++ +R +AL L
Sbjct: 209 LNPGDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNPTLPIVYGLRANALHHL 261
>gi|403367671|gb|EJY83659.1| TPR Domain containing protein [Oxytricha trifallax]
Length = 1407
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%)
Query: 160 SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
+ D+ S NL +L +++A EA + + ++ NLGN + +Y
Sbjct: 1208 AIDDQLSDVHYNLGNALYLVENIDEAVMHYREAINLNPKKAESYYNLGNALCVKNEYPNA 1267
Query: 220 KELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
Y AL+ D ALYNLG A+ LN+++D+++ + + I E + +AS Y
Sbjct: 1268 VNAYQQALELDPKNAPALYNLGNAYYMLNQFTDAIKVYLRALDINEESAECHFNLASAY 1326
>gi|346319214|gb|EGX88816.1| transcriptional corepressor Cyc8 [Cordyceps militaris CM01]
Length = 889
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ ++ LG C M+++ Y K E Y A+ D ++G+ + +N+Y D+L
Sbjct: 330 ADNTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGKNPTFWCSIGVLYYQINQYRDAL 389
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 390 DAYSRAIRLNPYISEVWYDLGTLYE 414
>gi|348687227|gb|EGZ27041.1| hypothetical protein PHYSODRAFT_553749 [Phytophthora sojae]
Length = 685
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A T D + + LG C MA +++ + + Y HA+ D+ +LG+ LN+
Sbjct: 262 KKAVTIDPQDGKGWYLLGRCYMAVQEFEEAYDSYKHAVTTDSQNPNVWCSLGVLFYQLNQ 321
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ D+L+ + + I P++ EV Y + +LY+ A D
Sbjct: 322 HLDALDAYSRAININPNICEVWYNVGTLYDTCNQTSDARDA 362
>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
Length = 125
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
++ A NL Y+ QG+ ++A + ++A N+ A+ NLGN + DY + E Y
Sbjct: 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67
Query: 225 HALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
AL+ EA YNLG A+ +Y +++E + K + P+ E
Sbjct: 68 KALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAE 112
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 196 DTYNSA-AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D NSA A+ NLGN + DY + E Y AL+ EA YNLG A+ +Y +++
Sbjct: 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAI 63
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E + K + P+ E Y + + Y GD ++A
Sbjct: 64 EYYQKALELYPNNAEAWYNLGNAYYKQGDYDEA 96
>gi|427416747|ref|ZP_18906930.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425759460|gb|EKV00313.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 286
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 132 SLAQDLE-----INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVE 183
+LAQD + + + V ++ + A+ +S D + A NL Y Q E++
Sbjct: 23 TLAQDFQSAEAALEQGVIHVQQGQLEDAISAFRSAVALDPTLAIAHYNLGLAYREQSEMQ 82
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
A +A AD + A+VNLG + + + + A+ + YNLGL
Sbjct: 83 AAADAFWQATQADDQFTMAYVNLGAALLDGGNLDQAESYLQRAVTLEPQLGIGHYNLGLV 142
Query: 244 HKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
+ + +L+ F K P PEV YQI +Y
Sbjct: 143 QRRQGKLPVALDSFLKAVEYSPQAPEVHYQIGLIY 177
>gi|325183067|emb|CCA17523.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 691
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 38/177 (21%)
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAE----KMAE------------- 190
++DV +V S EM S T + +Y L+ E++ A+ K+AE
Sbjct: 191 LHDVQNSV----STSEMASDIWTQIGHVYELKDEIQLAKSSYLKVAELNPNNARPLQQLG 246
Query: 191 -----------------EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATC 233
+A T D + + LG C MA ++ + + Y HA+ D
Sbjct: 247 WLCLKHAEHALAIEYLKKAVTIDPQDGKGWYLLGRCYMAVHEFEEAYDSYKHAVTTDPQN 306
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
+LG+ LN++ D+L+ + + I P++ EV Y + +LY+ A D
Sbjct: 307 PNVWCSLGVLFYQLNQHLDALDAYSRAININPNICEVWYNVGTLYDTCNQTSDARDA 363
>gi|163754734|ref|ZP_02161856.1| Tetratricopeptide repeat family protein [Kordia algicida OT-1]
gi|161325675|gb|EDP97002.1| Tetratricopeptide repeat family protein [Kordia algicida OT-1]
Length = 323
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
N Y+ +GE E A ++A D + A+ NLG E+Y + + Y +L D
Sbjct: 152 NEGVTYYRKGEYENAVVAYKKAVKKDKKFAFAWDNLGLSYRRLENYRQAIKAYRKSLKLD 211
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L NL +A +L +Y D+++ + K I P PE Y I+ +Y T + E++ D
Sbjct: 212 PKGRVPLMNLPIAQSYLGKYKDAIKSYQKFIEIYPEDPEGYYGISRMYMETKEYEKSLD 270
>gi|320586169|gb|EFW98848.1| transcriptional corepressor [Grosmannia clavigera kw1407]
Length = 870
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIY 176
C + I NS L + D+ + + D A + E + A L ++Y
Sbjct: 200 CFKYIVNSPPPPLTEEDIWFQIGHVYEQQKDFDNAKSAYQRVLERDPNHAKVLQQLGWLY 259
Query: 177 FLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
Q ++ A E++ AD ++ ++ LG C M+++ Y K E Y A+ +
Sbjct: 260 HNQSSSFSSQDRAIEYLEKSVAADNNDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYREGR 319
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 320 NPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPFISEVWYDLGTLYE 366
>gi|124266419|ref|YP_001020423.1| hypothetical protein Mpe_A1226 [Methylibium petroleiphilum PM1]
gi|124259194|gb|ABM94188.1| hypothetical protein Mpe_A1226 [Methylibium petroleiphilum PM1]
Length = 243
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
E KA+ R D + + L + NL + G + +A E A A+
Sbjct: 86 EARKAMRAGRPADAERGLRALVKSNPELGGPHANLGLLLRQAGRLPEAVAELEAAVHANP 145
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHK-HLNEYSDSLEC 256
+ F LG + ++ K +E Y A+D DAT L NLG+ H +L E S +L
Sbjct: 146 QQAVYFNQLGIAYRQQGEFAKAREAYERAIDLDATYASPLLNLGILHDLYLGEGSRALAL 205
Query: 257 FHKLQAIVPS 266
+ + A+ P
Sbjct: 206 YDRYLALSPG 215
>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2342
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 40/234 (17%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
S +L++IYFL+ ++A K +A D A+ LG R+ Y + + Y A
Sbjct: 248 SVYISLAYIYFLKQLDQEAIKQLRKAIEIDPNFVQAYERLGFVFQNRKKYEEAIKNYKKA 307
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY-------E 279
++ D A YNLGL + + +Y+DSL C+ K + P + + +Y E
Sbjct: 308 IELDPKYFNAQYNLGLLYYYQGKYNDSLLCYKKAIELDPKYVDAYNNLGLVYFGLDMNNE 367
Query: 280 ITGDVEQASDVN----------------ENLLLEAVRN------------DALSQL---- 307
++A ++N +NL+ EA+ + AL +L
Sbjct: 368 AIQYYQKALELNPDYYKAHYNSGLAYEKDNLIEEAIESYKKAIKINPKFLKALIRLGDIC 427
Query: 308 -HREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEIN 360
REM E +C +L S D FS G + + I A + LEIN
Sbjct: 428 VEREMIDEGIECFKKIVQLSPNSEYDFFSLGELYLTKKIYEEAIKCYKKTLEIN 481
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N +++ V +A++ K E+ +A+TN+ ++Y Q ++A + + A +
Sbjct: 524 NCGISYASKKMVDEAIECYKKVLEINPQYLNASTNMGYLYSQQKMYDKAIECYQSALQVN 583
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ NLG + + E+Y + D A YN+G+A++ N + +++E
Sbjct: 584 ENSLKILNNLGYAYYKSNMHDQAIEIYKRVIQIDPKSFLANYNIGVAYQMKNMFDEAIEF 643
Query: 257 FHKLQAIVPSMPEVLYQIASLY 278
+ K++ I P V ++ ++Y
Sbjct: 644 YKKVEEIFPKYFTVFIRLGNVY 665
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 25/258 (9%)
Query: 145 FLRMNDVSQAVDVLKSCDEMTSSAATN---LSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
+L + +A + K +EM A L +Y Q V++A ++A + +++
Sbjct: 1514 YLEQKKIDEAKEYHKMINEMNPDCAQTQQELGTVYQDQKMVDEAIACYQKAIELNPQSTS 1573
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A++ LGN + + Y K E Y L+ D A N+GL H + N +LE ++K
Sbjct: 1574 AYIELGNSYLGKVMYDKALECYKKVLEIDPKKAVAYNNIGLVHYNQNMDDLALEYYNKAL 1633
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILT 321
+ P +Y +YE ++A + + +L A+ L R ++ EK +
Sbjct: 1634 EVNPKYELSIYNSGLIYEQKNQNDKALECYKKVL--AINPTDKKTLTR-IEKINEKNV-- 1688
Query: 322 SAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC 381
+ KL +E+ +Q + +A L Q A +L + V Q++++LK
Sbjct: 1689 NLKLSEKDLEEK--------LQKVPVTAKDHLEQ------AFLYLTIKKVEQSIELLKKA 1734
Query: 382 DEMTSS---AATNLSFIY 396
E+ + A L IY
Sbjct: 1735 IEIDPNYYDAYDKLGLIY 1752
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ + N +++A+ + E+ S +A L +Y ++A ++ ++ DT
Sbjct: 1817 GLAYQDKNMLNEAIVLFSKAIELDSKHVNAYVKLGNVYLKLIMYDKALEVFQKILEIDTK 1876
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
A+ N+G ++ E Y AL+ + + +LYN GL ++ N+ +LEC+
Sbjct: 1877 QVVAYNNIGLVYYNQKKDDLALEYYQKALEINPKYLLSLYNSGLVYETKNQNDKALECYQ 1936
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN-----DALSQLH----R 309
K I P+ + L ++ L+ TG ++ DV +N L + +N D Q + +
Sbjct: 1937 KALDINPNDKQTLDRMMKLFLKTGIIKDEFDV-DNFLQKMEKNTQSAYDFYKQGYTFYSK 1995
Query: 310 EMKHEAEKCILTSAKLIAPSIEDNFSNGYN 339
+MK ++ KC+ A I+ NF Y+
Sbjct: 1996 KMKDQSIKCLNK-----AIEIDPNFFEAYD 2020
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDA 231
L IY + E +QA + + D A N+G ++ K E Y AL+ +
Sbjct: 1035 LGCIYLDKKEYQQAIEYFNKVIELDPKEVVALNNIGLAYYDQKMNEKALEYYNKALEINP 1094
Query: 232 TCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDV 284
T +++YN GL ++ N+Y +LE ++K+ I P+ + L ++ + E G++
Sbjct: 1095 TFQQSIYNTGLVYEIQNQYEKALEYYNKVLKINPTEKKSLLRVEKINEKIGNI 1147
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 225 HALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDV 284
A++ D ++A L A+K N+ EC+ K+ I P E +++A YEI G +
Sbjct: 102 QAIEIDPNFVQAYQKLAQAYKKQNKLDQITECYKKIIEIEPKNMEAFHELALTYEIKGQI 161
Query: 285 EQASDVNENLL------LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGY 338
++A + +L ++A + A + M EA + + T+ ++ S E + G+
Sbjct: 162 DEAYAWYKKILTIDPQFIKAYISLARNYFCDSMTEEAIRMLKTALEIDPNSAEAHERLGF 221
Query: 339 NWCVQSIRNSAHSSLAQDLEIN 360
+ QS+ +SA S LE N
Sbjct: 222 IYEKQSMFDSALISYKIALEKN 243
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 32/227 (14%)
Query: 180 GEVEQAEKMAEEA-------CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
GEV Q + M +EA D A + LGN + + D + E Y AL+ +
Sbjct: 1276 GEVYQDQNMIDEAFECYQKILKIDPQYIDAHIELGNIYLDKHDNDQALECYKRALEINPK 1335
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNE 292
I A N+GL + +L +LE + K I P+ +Y YE E+A
Sbjct: 1336 EIVAYNNIGLVYYNLKNSDQALEYYKKALEIDPNYELSIYNSGLAYEQKNQNEEALKYYN 1395
Query: 293 NLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSS 352
+ +++ +K +L K+ S+ +NF + QSI N+ +
Sbjct: 1396 KV--------------QQINPNEKKSLLRIQKI--NSLNENFDSK---IQQSIENNPQT- 1435
Query: 353 LAQDLEINKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSFIY 396
A+D + +++M D ++++ LK D + A L F+Y
Sbjct: 1436 -AKDYYKQGFLYYVQMQD-DKSIECLKKSVELDPLYFEAYDKLGFVY 1480
>gi|195423963|gb|ACF96937.1| SPINDLY [Sinningia speciosa]
Length = 934
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A +M ++A AD +Y AA +LG
Sbjct: 111 DPQNACALTHCGILYKDEGRLAEAAEMYQKALKADPSYKLAAECLAIVLTDLGTSLKLAG 170
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ +G + Y A+ D A YNLG+ + + +Y +L C+ K P E +
Sbjct: 171 NTQEGIQKYYEAIKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAIERPMYAEAYCNM 230
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 231 GVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 280
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G++
Sbjct: 229 NMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINHGVAYY 288
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 289 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN 348
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ +I P+ + L + +Y + G ++ A+ + E ++
Sbjct: 349 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIV 395
>gi|116204629|ref|XP_001228125.1| hypothetical protein CHGG_10198 [Chaetomium globosum CBS 148.51]
gi|88176326|gb|EAQ83794.1| hypothetical protein CHGG_10198 [Chaetomium globosum CBS 148.51]
Length = 883
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGE----VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L +++ Q + E+A + E++ AD ++ ++ LG C M + Y K E Y A+
Sbjct: 261 LGWLHHTQSQHFDSQERAIEYLEKSVAADNSDAQSWYLLGRCYMQMQKYPKAYEAYQQAV 320
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 321 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPWISEVWYDLGTLYE 372
>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 403
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
NK V + +A++ + D N + G+ E+A + E+A +
Sbjct: 89 NKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEIN 148
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
N+ A+ N GN + Y + E Y AL +A +EA YN L + L Y ++LEC
Sbjct: 149 QKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALIFEELKRYDEALEC 208
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ + I P +L + G E+A + E L
Sbjct: 209 YGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKAL 247
>gi|15606362|ref|NP_213741.1| hypothetical protein aq_1088 [Aquifex aeolicus VF5]
gi|12230801|sp|O67178.1|Y1088_AQUAE RecName: Full=Uncharacterized protein aq_1088
gi|2983568|gb|AAC07141.1| hypothetical protein aq_1088 [Aquifex aeolicus VF5]
Length = 761
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%)
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
++ ++L +YF G VE AE++ ++A + A + LG ++ + + +
Sbjct: 68 SAQGLSDLGLLYFFLGRVEDAERVLKKALKFSDVDDALYARLGALYYSQGKLEEAQHYWE 127
Query: 225 HALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
AL + +E LYNLG+ H + E +L+ F + + P E
Sbjct: 128 RALSLNPNKVEILYNLGVLHLNKGELEKALDLFERALRLKPDFRE 172
>gi|456385763|gb|EMF51316.1| hypothetical protein SBD_7021 [Streptomyces bottropensis ATCC
25435]
Length = 516
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 114 FSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLS 173
F++ + ++++ + +S A ++ V R +D S+AV + S T +
Sbjct: 204 FADALRYADRALKENPYSERALCSRVDALVELGRYDDASKAVKLADSRRPGIP-VFTRYA 262
Query: 174 FIYFLQGEVEQAEKMAEEAC-TADTYNSAAFV--NLGNCAMAREDYVKGKELYVHALDND 230
+++ L+G+V+ A ++ A +A T A+V LG A + DY Y AL D
Sbjct: 263 YVHELRGDVKTARRVLNMALRSAATRGDIAYVATQLGQLAWRQGDYKTALTHYARALGAD 322
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
T + AL A + ++++ ++ A P +P L + LYE GD +A D
Sbjct: 323 DTYLPALEGRARAQAASGDRAEAIRGLEQVVASYP-LPGPLVVLGELYEAKGDKAKARD 380
>gi|11467562|ref|NP_043708.1| photosystem I assembly protein Ycf3 [Odontella sinensis]
gi|1351777|sp|P49525.1|YCF3_ODOSI RecName: Full=Photosystem I assembly protein ycf3
gi|1185257|emb|CAA91740.1| ORF179 [Odontella sinensis]
Length = 179
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G A A E+Y + +L D T LYN+GL + + YS +LE +H+ + +
Sbjct: 43 GKYAEALENYYEALQLEEDPYDRSYT----LYNIGLIYGNNGNYSQALEYYHQALELNSN 98
Query: 267 MPEVLYQIASLYEITG-DVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKL 325
+P+ L IA +Y G + Q + ++NL +RND +L +E +A + + KL
Sbjct: 99 LPQALNNIAVIYHSQGLNALQMQNQDKNL---EIRNDEYLELAKEFFDKAAEYWRQALKL 155
Query: 326 IAPSIEDNFSNGYNWCVQSIR 346
AP DN+ NW + R
Sbjct: 156 -AP---DNYPGAQNWLKVTGR 172
>gi|51244947|ref|YP_064831.1| hypothetical protein DP1095 [Desulfotalea psychrophila LSv54]
gi|50875984|emb|CAG35824.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 209
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 150 DVSQAVDVL-KSCDEMTSS--AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
D+SQ + L K C + +S A +L +Y G V++A E+A D + + +NL
Sbjct: 8 DLSQIIAELEKKCGQNPNSVMAVHHLGLVYMKAGRVDEAITCLEKALEIDDLSHESMINL 67
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G + + K +EL A+ + +A NLGL + NE +L + K P
Sbjct: 68 GAIYFGQGNVAKAQELNERAIASQPESAQAHANLGLIWQQQNELDKALASYEKAVQYDPK 127
Query: 267 MPEVLYQIASLYEITGDVEQA 287
+ V +AS+ + G+ ++A
Sbjct: 128 LITVWLNLASVLTMKGEDDRA 148
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 142 AVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ +++ V +A+ L+ D+++ + NL IYF QG V +A+++ E A +
Sbjct: 34 GLVYMKAGRVDEAITCLEKALEIDDLSHESMINLGAIYFGQGNVAKAQELNERAIASQPE 93
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
++ A NLG + + K Y A+ D I NL E ++E
Sbjct: 94 SAQAHANLGLIWQQQNELDKALASYEKAVQYDPKLITVWLNLASVLTMKGEDDRAVESSQ 153
Query: 259 KLQAIVPSMP 268
K I P P
Sbjct: 154 KAIDIDPDSP 163
>gi|305666185|ref|YP_003862472.1| hypothetical protein FB2170_07904 [Maribacter sp. HTCC2170]
gi|88707683|gb|EAQ99924.1| hypothetical protein FB2170_07904 [Maribacter sp. HTCC2170]
Length = 757
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 146 LRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEK-----MAEEACTADT 197
L+ DV+ A+D + D + + T+L+ +Y+ G++ +AE + +E T
Sbjct: 585 LKKGDVANAIDNYEKALKIDNLNNMVRTSLANLYYRNGKLNEAETAFKLIIKQEPEYGPT 644
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
Y S A + L E ++ ++ H +N + YNLGL + +NE + E
Sbjct: 645 YYSLALL-LAETGRNNEAIIQLEKAMTHMPEN----LRVYYNLGLLYDSVNETKKAKEAI 699
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREM 311
K + PS E+LY +A + G++++A ++ L+ N S R++
Sbjct: 700 IKGLKVYPSNEELLYTLAFFHSKYGEIDRAREIGLQLVQLFPNNTNYSNFLRQL 753
>gi|340505437|gb|EGR31764.1| hypothetical protein IMG5_102640 [Ichthyophthirius multifiliis]
Length = 1411
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Query: 161 CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
CD L+ Y+L + A + EE D N NLGNC + + +
Sbjct: 1191 CDPTDMECKVGLANCYYLLENFDLAIQYYEEISNIDQ-NEEIEYNLGNCYYMKGEIDEAI 1249
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
Y +++D + LYNLG A + + +LECF K I P +Y +A+ Y I
Sbjct: 1250 SHYKNSIDIKPDKTDCLYNLGNAFCIVQNFEKALECFQKTVDIEPHNSSAIYNLANTYYI 1309
Query: 281 TGDVEQA 287
G+ E A
Sbjct: 1310 LGEHELA 1316
>gi|392409499|ref|YP_006446106.1| Tfp pilus assembly protein PilF [Desulfomonile tiedjei DSM 6799]
gi|390622635|gb|AFM23842.1| Tfp pilus assembly protein PilF [Desulfomonile tiedjei DSM 6799]
Length = 297
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
AA N+ YF + ++++A + E+A N A NLG ++++ K + Y A
Sbjct: 140 AAYNMGVAYFNKKDLDKATEYYEKAIKLKDDNPNALFNLGYIYEEKKNFGKALDAYKKAA 199
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
D + EA Y LG+ + + EY SLE + P Y++ ++ TG++E
Sbjct: 200 TLDPSFKEAFYRLGVIYDNQQEYGKSLEALKNAVQVDPDYLAAQYRLGMVFLKTGNMEGG 259
Query: 288 SDVNENLLLEAVRNDALSQLHREMKHEAEK 317
E + V+ D SQ ++ E K
Sbjct: 260 LKKLEFV----VKTDPESQFAKDALGELNK 285
>gi|367035416|ref|XP_003666990.1| hypothetical protein MYCTH_2071423 [Myceliophthora thermophila ATCC
42464]
gi|347014263|gb|AEO61745.1| hypothetical protein MYCTH_2071423 [Myceliophthora thermophila ATCC
42464]
Length = 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGE----VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L +++ Q + E+A + E++ AD ++ ++ LG C M + Y K E Y A+
Sbjct: 252 LGWLHHTQSQHYDSQERAIEYLEKSVAADNSDAQSWYLLGRCYMQMQKYPKAYEAYQQAV 311
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 312 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 363
>gi|195998441|ref|XP_002109089.1| hypothetical protein TRIADDRAFT_52761 [Trichoplax adhaerens]
gi|190589865|gb|EDV29887.1| hypothetical protein TRIADDRAFT_52761 [Trichoplax adhaerens]
Length = 918
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 123/307 (40%), Gaps = 70/307 (22%)
Query: 58 ADSH-NIELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSN 116
D+H +I T+ NI + +DALS ++ +K LT PSI D + N
Sbjct: 343 GDNHPSIADTYHNIGNVYKDQGKYDDALSMYNKSLK-----IKLTQLGDNHPSIADTYHN 397
Query: 117 -GYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--NLS 173
G + Q + A L M + S + + + D S A T N+
Sbjct: 398 IGLVYDDQGKYDDA----------------LSMYNKSLKIKLTQLGDNHPSIATTYHNIG 441
Query: 174 FIYFLQGEVEQAEKMAEEA-------------CTADTYNSAAFV--NLGNCAMAREDYVK 218
+Y QG+ + A M ++ A+TYN+ A V N G A Y K
Sbjct: 442 RVYNRQGKYDDALSMFNKSLKMKLTQLGNNHPSIANTYNNIASVYDNQGKYDDALLMYNK 501
Query: 219 GKELYVHALDNDATCIEALYN-LGLAHKHLNEYSDSLECFHKLQAIV--------PSMPE 269
++ + L ++ I YN +GL + H +Y D+L ++K I PS+ +
Sbjct: 502 SLKINLTQLGDNHPSITTTYNNIGLVYDHQGKYDDALSMYNKSLKIRQTQLGDNHPSIAD 561
Query: 270 VLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPS 329
+ IAS+Y+I G + DALS ++ +K + LT PS
Sbjct: 562 TYHNIASVYDIQGKYD----------------DALSMYNKSLKID-----LTQLGDNHPS 600
Query: 330 IEDNFSN 336
I D ++N
Sbjct: 601 IADTYNN 607
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 69/349 (19%)
Query: 58 ADSH-NIELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSN 116
D+H +I T+ NI R N + +DALS ++ +K + LT PSI + ++N
Sbjct: 427 GDNHPSIATTYHNIGRVYNRQGKYDDALSMFNKSLKMK-----LTQLGNNHPSIANTYNN 481
Query: 117 GYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--NLSF 174
+ S+ ++ K L M + S +++ + D S T N+
Sbjct: 482 -----IASVYDNQ----------GKYDDALLMYNKSLKINLTQLGDNHPSITTTYNNIGL 526
Query: 175 IYFLQGEVEQAEKMAEEA-------------CTADTYNSAAFVN--LGNCAMAREDYVKG 219
+Y QG+ + A M ++ ADTY++ A V G A Y K
Sbjct: 527 VYDHQGKYDDALSMYNKSLKIRQTQLGDNHPSIADTYHNIASVYDIQGKYDDALSMYNKS 586
Query: 220 KELYVHAL-DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI--------VPSMPEV 270
++ + L DN + + N+ + H +Y D+L ++K I PS+
Sbjct: 587 LKIDLTQLGDNHPSIADTYNNIASVYNHQGKYDDALSMYNKSLKINLTQLGDNHPSIATT 646
Query: 271 LYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSI 330
+ IA++Y G + DALS ++ + K LT PSI
Sbjct: 647 YHNIANVYHHQGKYD----------------DALSMYNKSL-----KIKLTQLGDNHPSI 685
Query: 331 EDNFSN-GYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL 378
+ N G+ + QS A S Q L+I +V DV+++ L
Sbjct: 686 AITYCNIGHVYSDQSKHTEAISMYKQSLKIQLSVLGRNHPDVAKSYSGL 734
>gi|50546166|ref|XP_500610.1| YALI0B07579p [Yarrowia lipolytica]
gi|49646476|emb|CAG82843.1| YALI0B07579p [Yarrowia lipolytica CLIB122]
Length = 885
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD + ++ LG C MA++ Y K E Y A+ D ++G+ + +N+Y D+L
Sbjct: 257 ADPLEAQSWYLLGRCYMAQQKYNKAYEAYQRAVYRDGRNPTFWCSIGVLYYQINQYRDAL 316
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 317 DAYSRAIRLNPYISEVWYDLGTLYE 341
>gi|268573518|ref|XP_002641736.1| Hypothetical protein CBG10075 [Caenorhabditis briggsae]
Length = 1143
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACT--ADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
A +L+ +F +GEVE+A +++ A + D+ + AF +G C + Y + Y
Sbjct: 285 ALVHLANHFFFKGEVERAWQLSWHAASNDCDSIKAEAFYQMGRCRHTQGQYDGAYKYYYQ 344
Query: 226 ALD-NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
A N+ A Y LG + H NE ++++CF + +P + + + SLY
Sbjct: 345 ARQANNQEHTLAHYGLGQMYIHRNEIEEAIKCFEVVHQRLPHNTDTMKILGSLY 398
>gi|413936918|gb|AFW71469.1| hypothetical protein ZEAMMB73_864118 [Zea mays]
Length = 706
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY + A + A + + S+ NL
Sbjct: 70 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 129
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D T +AL N G K + +++++ + + I P+M
Sbjct: 130 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNM 189
Query: 268 PEVLYQIASLYEITGDVEQA 287
PE +AS Y+ +G VE A
Sbjct: 190 PEAHANLASAYKDSGHVETA 209
>gi|193659732|ref|XP_001943461.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
[Acyrthosiphon pisum]
Length = 1185
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 37/300 (12%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQ------GEVEQAEKMA 189
D+ + A FL++ ++ +A + ++ S L + ++ G+++ M
Sbjct: 198 DVRLGMAHCFLKLGNIEKARLAFERALQLDSKCVGALVGLAIMKLNGENPGDIKLGVNML 257
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T DT N +L N ++DY K + L HAL +N+A E+ Y + A
Sbjct: 258 SKAYTIDTTNPMVLNHLSNHFFFKKDYTKSELLARHALQNTENEAMRAESCYQMARAFHV 317
Query: 247 LNEYSDSLECFHKLQAIVP---SMPEVLYQIASLYEITGDVEQASDVNENLL------LE 297
N Y + + +++ P +P Y + +Y GD+E A+ E +L E
Sbjct: 318 QNNYDQAFQYYYQATQFAPVTFVLPH--YGLGQMYIYGGDMENAAQCFEKVLKAHPGNYE 375
Query: 298 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDL 357
A++ L L+ + K++ ++ I AK + ++F + V+ + S L L
Sbjct: 376 AMK--ILGSLYADSKNQQKRDI---AKSHLKKVTEHFPDDVEAWVELAQILEQSDLQASL 430
Query: 358 E-INKAVTFLR-----------MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLVSSEFQY 405
+KA+ +R +N+V+ LK+ DE S +LS +V ++ Q+
Sbjct: 431 SAYDKAMVLMRNSVNNYIPPEILNNVAALNYRLKNMDESRSKLEESLSLSKKMVEADPQH 490
>gi|281207377|gb|EFA81560.1| hypothetical protein PPL_05549 [Polysphondylium pallidum PN500]
Length = 954
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
++ AD ++ + LG C M ++ Y K + Y A+ D ++G+ + +N+Y
Sbjct: 247 KSIDADPSDAQTWYLLGRCYMIQQKYKKAYDAYQQAVYRDGRNPSFWCSIGVLYYQINQY 306
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D+L+ + + I P + EV Y + +LYE
Sbjct: 307 RDALDAYTRAIRINPYISEVWYDLGTLYE 335
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 157 VLKSCDEMTSSAATN--LSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMARE 214
++KS D S A T L Y +Q + ++A ++A D N + + ++G
Sbjct: 245 LMKSIDADPSDAQTWYLLGRCYMIQQKYKKAYDAYQQAVYRDGRNPSFWCSIGVLYYQIN 304
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
Y + Y A+ + E Y+LG ++ N+Y+DSL+ + K + P + ++
Sbjct: 305 QYRDALDAYTRAIRINPYISEVWYDLGTLYESCNQYTDSLDAYQKASELDPHNKHIQSRL 364
Query: 275 ASLYEITGDVEQASD 289
A+L G + ++ D
Sbjct: 365 ATL---KGQIARSKD 376
>gi|308501437|ref|XP_003112903.1| hypothetical protein CRE_25581 [Caenorhabditis remanei]
gi|308265204|gb|EFP09157.1| hypothetical protein CRE_25581 [Caenorhabditis remanei]
Length = 1331
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACT---ADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
A +L+ +F +G++++A +A A D+ + A+ G C A+ +Y + Y
Sbjct: 466 ALVHLANHFFFKGQIDRAFHLASHAAQHNECDSIRAEAYFQAGRCRHAQGNYDGAYKFYY 525
Query: 225 HALD-NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
A N+ A Y LG H NE D+++CF + +P E + + SLY
Sbjct: 526 QARQANNGEHTLAHYGLGQMFIHRNEIEDAIKCFETVHQRLPQNMETMKILGSLY 580
>gi|209525065|ref|ZP_03273609.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|376004646|ref|ZP_09782293.1| Photosystem I assembly protein Ycf3 [Arthrospira sp. PCC 8005]
gi|376006441|ref|ZP_09783712.1| Photosystem I assembly protein Ycf3 [Arthrospira sp. PCC 8005]
gi|423065721|ref|ZP_17054511.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|209494474|gb|EDZ94785.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|375325180|emb|CCE19465.1| Photosystem I assembly protein Ycf3 [Arthrospira sp. PCC 8005]
gi|375326994|emb|CCE18046.1| Photosystem I assembly protein Ycf3 [Arthrospira sp. PCC 8005]
gi|406712775|gb|EKD07954.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 173
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 25/150 (16%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHAL-----DNDATCIEALYNLGLAHKHLNEYSDSLEC 256
A+ G A A +Y + E Y AL ND + I LYN+GL H E+ +L+
Sbjct: 37 AYYRDGMSAQADGEYAEALENYYEALKLEQDPNDRSYI--LYNIGLIHTSNGEHDQALDY 94
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAE 316
+H+ + P +P+ L IA ++ GD + EA DA Q +RE +
Sbjct: 95 YHQAIDLNPRLPQALNNIAVIFHYRGDRAK----------EAGDEDAAEQAYREAAEYWK 144
Query: 317 KCILTSAKLIAPSIEDNFSNGYNWCVQSIR 346
+ I +AP+ N+ NW + R
Sbjct: 145 RAI-----RLAPN---NYIEAQNWLKTTGR 166
>gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia]
Length = 2950
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
E N+ LR +A+D D+ A L Y+LQ + EQA ++ EE D
Sbjct: 2714 EKNQPAKALRY--FQKAID----SDKNDMEAKIGLGNCYYLQEQFEQAIQIYEEISHLDQ 2767
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
N N+ NC + D+ + Y AL + IE YNLG + + ++ ++LECF
Sbjct: 2768 -NEELEYNMANCYYMKNDFEEAVLHYQKALSINPDKIECYYNLGNTYCIMEKFEEALECF 2826
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
++ P Y A+ + + D E A+
Sbjct: 2827 ERVVKDDPKHSAAFYNYANTFFVLQDYENAA 2857
>gi|255562045|ref|XP_002522031.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223538835|gb|EEF40435.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 979
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 14/220 (6%)
Query: 72 RKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC-VQSIRNSAH 130
R A A N A + + + +EA +C A + P + D SN N Q + A+
Sbjct: 153 RPNFADAWSNLASAYMRKGRLNEAAQCC-RQALALNPLLVDAHSNLGNLMKAQGLVQEAY 211
Query: 131 SSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFL 178
S + L I N A FL D+++A+ K ++ + A NL +Y
Sbjct: 212 SCYLEALRIQPTFAIAWSNLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRA 271
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G ++A + A + AF NL + R Y A+ D +EA
Sbjct: 272 LGMPQEAIVCYQRAVQTRPNYAVAFGNLASTYYERGQLDLAIHHYKQAIACDGRFLEAYN 331
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
NLG A K + ++++C+++ A+ PS P+ L + ++Y
Sbjct: 332 NLGNALKDVGRVEEAIQCYNQCLALQPSHPQALTNLGNIY 371
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A+ C + S A TNL IY A + T SA F NL
Sbjct: 343 VEEAIQCYNQCLALQPSHPQALTNLGNIYMEWNMASTAASYYKATLAVTTGLSAPFNNLA 402
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D + L N G +K + SD+++ + + I P+M
Sbjct: 403 VIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITIRPTM 462
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 463 AEAHANLASAYKDSGRVEAA 482
>gi|409990886|ref|ZP_11274204.1| photosystem I assembly protein Ycf3 [Arthrospira platensis str.
Paraca]
gi|291570326|dbj|BAI92598.1| TPR domain protein [Arthrospira platensis NIES-39]
gi|409938245|gb|EKN79591.1| photosystem I assembly protein Ycf3 [Arthrospira platensis str.
Paraca]
Length = 173
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 25/150 (16%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHAL-----DNDATCIEALYNLGLAHKHLNEYSDSLEC 256
A+ G A A +Y + E Y AL ND + I LYN+GL H E+ +L+
Sbjct: 37 AYYRDGMSAQADGEYAEALENYYEALKLEQDPNDRSYI--LYNIGLIHTSNGEHDQALDY 94
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAE 316
+H+ + P +P+ L IA ++ GD + EA DA Q +RE +
Sbjct: 95 YHQAIELNPRLPQALNNIAVIFHYRGDRAK----------EAGDPDAAEQAYREAAEYWK 144
Query: 317 KCILTSAKLIAPSIEDNFSNGYNWCVQSIR 346
+ I +AP+ N+ NW + R
Sbjct: 145 RAI-----RLAPN---NYIEAQNWLKTTGR 166
>gi|293334567|ref|NP_001167956.1| uncharacterized protein LOC100381672 [Zea mays]
gi|223945123|gb|ACN26645.1| unknown [Zea mays]
Length = 1009
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY + A + A + + S+ NL
Sbjct: 373 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 432
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D T +AL N G K + +++++ + + I P+M
Sbjct: 433 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNM 492
Query: 268 PEVLYQIASLYEITGDVEQA 287
PE +AS Y+ +G VE A
Sbjct: 493 PEAHANLASAYKDSGHVETA 512
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
R+N+ +Q + + A +NL + QG +++A EA D + + A+ NL
Sbjct: 202 RLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSNL 261
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
M D K Y A+ + +A N G +K L D++ C+ + P
Sbjct: 262 AGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCYQRALQARPD 321
Query: 267 MPEVLYQIASLYEITGDVEQA 287
+A++Y G ++ A
Sbjct: 322 YAMAYGNLATIYYEQGQLDMA 342
>gi|350561448|ref|ZP_08930286.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780480|gb|EGZ34798.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 263
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 138 EINK--AVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
EIN V++LR N+++QA L+ D + A ++ + QG ++ AE+ A
Sbjct: 45 EINAELGVSYLRQNELAQAQRALERSLQFDPNLALAHLGMASLRERQGALDSAEEHYRRA 104
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE--ALYNLGLAHKHLNEY 250
+ D + A NLG+ + DY +G EL A+ N + AL + G H +
Sbjct: 105 LSLDRRDPYAQTNLGDLLCRKGDYREGLELLERAIANPSYPARGIALLSAGKCHARAGDR 164
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASL 277
+ E + I P PE LY++A L
Sbjct: 165 ERAEERLREALRIDPESPEALYELAQL 191
>gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 658
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 145/349 (41%), Gaps = 57/349 (16%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIR------NSAHSSLAQ 135
+AL L ++M ++ I + K++ + + NGYN C+ +I + A S Q
Sbjct: 153 EALGNLQQDMGL-IQEAIFSYNKIL--EVNPKYENGYN-CLANIYYKIGKVDEAISIFKQ 208
Query: 136 DLEINK---------AVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVE 183
+E+N +T+ R +A+ + K C E+ S A N+ Y QG V+
Sbjct: 209 CIEVNPKHENTYINLGLTYKRKGMSEEALILFKRCLEINSRNEVAHYNIGLEYIHQGRVD 268
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE-------A 236
+A + ++ N + L + A A E+ K + A++ C++ A
Sbjct: 269 EAILVFLKSLDL---NPSYEECLNSLASAYEE----KGMMEDAIETYQKCLQLNQNNEIA 321
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
LYNLGL +K ++S S+ F K I P P+ + + Y + G Q D + +L+
Sbjct: 322 LYNLGLIYKQQCQFSQSILYFKKCIQINPKDPDYYNGLGNSYRLNG---QLDDSIQTILI 378
Query: 297 --EAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNG-----YNWCVQSIR--N 347
+ ND + + + + C L +++ + S+E N + Y C + +
Sbjct: 379 CVKLNPNDDSYHYNLGLAYYQKGCFLEASQYFSKSLEINPKDSQTLYHYGLCCYELEQLD 438
Query: 348 SAHSSLAQDLE---------INKAVTFLRMNDVSQAVDVLKSCDEMTSS 387
A S+ Q LE N + N + +++ K C E+ +
Sbjct: 439 KAVSAFVQSLEYDPKNENTYYNLGQAYYDQNKIEESIQCFKICLEINPN 487
>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 1421
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N+A+ +M ++ A++ K E+ NL Y GE +A ++ +A D
Sbjct: 899 NRAIAIAQMGNLKGAIENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVD 958
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ +S + NLG D Y A+ + EA YN G+A++ L D++
Sbjct: 959 SQDSQIYQNLGVVRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMND 1018
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLL-----EAVRNDAL 304
F K+ + P + + Q + D+E A +D N+ + L EA+ N A+
Sbjct: 1019 FTKVLQLHPRVVDAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAI 1072
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTSSAA---TNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ LR D+S A++ ++ ++ + A N F F +G++ A K E A +
Sbjct: 1173 GIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIPGAMKDFEAAIQINPN 1232
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD-SLECF 257
+ A+ NLGN D+ + L + A N LA L ++S + +C+
Sbjct: 1233 YAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHPKYVPAYNNRALALLKLGDFSGATTDCY 1292
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQAS-DVNENLLLEAVRNDA 303
L+ I P Y + ++ GD+EQA D NE L + + DA
Sbjct: 1293 QALK-INPKYGLAYYNLGLIHTEMGDLEQAILDYNEVLRIYPRKIDA 1338
>gi|334117397|ref|ZP_08491488.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333460506|gb|EGK89114.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 2028
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%)
Query: 169 ATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD 228
A NL+ I+ QG+VE+A E+A A A +NL + + V+ ELY AL+
Sbjct: 747 AYNLAKIFEEQGQVEEAIAHYEQALVAQPDFVPALINLAVARQEKGELVRAIELYRRALE 806
Query: 229 NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
EA NL + D+LE +HK ++P E + + + G VE A
Sbjct: 807 IHPHSWEAYNNLATVLQEQGNLEDALEYYHKALELLPDFVEAINNLGRTFLEKGAVEDA 865
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
LY + + C++A N G + E ++ + + AI P++P+ Y +A ++E
Sbjct: 698 LYEQIISLEPNCVQARINFGFLKQENGELEAAIPHYREALAIAPNIPQTAYNLAKIFEEQ 757
Query: 282 GDVEQA 287
G VE+A
Sbjct: 758 GQVEEA 763
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/119 (19%), Positives = 53/119 (44%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
NL++ QG++++A E + + + LG+ ++ + + + A+
Sbjct: 1385 NLAYASIRQGKIDRAIAYYERSTALQPDLAETLIGLGSSLQQQDKLDEARAVCQQAIQQL 1444
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+A NLG+ + + D++ C+ + ++ P PE L + +E G + +A D
Sbjct: 1445 PASAQARCNLGIVLQKQGKIEDAIGCYQQALSLKPDFPEALNNLGKAFEEAGKMVEAID 1503
>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
Length = 463
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N+ F D +++++ + D + A NL F GE E++ + +EA D
Sbjct: 139 NQGGVFYSRGDYNRSIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKID 198
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ A+ N G + + + Y AL + + + ALYN G+A L +++EC
Sbjct: 199 PLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPSHVMALYNKGIALGLLGRQEEAVEC 258
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQ-ASDVNENLLLEAV-------RNDALSQLH 308
+ + + PS P Y + G EQ A+ +E L L+ R AL L
Sbjct: 259 YDAVLKVDPSYPPAWYNRGVALGLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLG 318
Query: 309 RE 310
R+
Sbjct: 319 RQ 320
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
R ++ ++ D D + A +N +++ +G+ ++ + E A D + A+ NL
Sbjct: 115 RGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNRSIECYERALEIDPRSREAWNNL 174
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G A +Y + E Y AL D A N G+A L + ++L+C+ + I PS
Sbjct: 175 GRSLFAAGEYERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPS 234
Query: 267 MPEVLYQIASLYEITGDVEQA 287
LY + G E+A
Sbjct: 235 HVMALYNKGIALGLLGRQEEA 255
>gi|197120108|ref|YP_002140535.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089468|gb|ACH40739.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 1005
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ A NL + +GE ++A E A A+VNLG+C E+ + ELY
Sbjct: 602 ADAQNNLGTLLVARGEHDEALPFFERALELRGDYLPAYVNLGSCLQVLEEPERAVELYRR 661
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
A+ + +A NLG A++ L + ++E + +L + P PE + +A GD +
Sbjct: 662 AIALEPGFFKARINLGTAYQDLMQPEKAIETYRELLELAPEHPEAHWNLALSLLSVGDFK 721
Query: 286 QA 287
Sbjct: 722 WG 723
>gi|392896102|ref|NP_001254998.1| Protein B0464.2, isoform c [Caenorhabditis elegans]
gi|224492384|emb|CAX51622.1| Protein B0464.2, isoform c [Caenorhabditis elegans]
Length = 1201
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACT---ADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
A +L+ +F + E+E+A +A A T D+ + AF +G C A+ + + Y
Sbjct: 336 ALIHLANHFFFKKEIERAWTLAWHAATYNDCDSIKAEAFYQMGRCRHAQGQFDGAYKYYY 395
Query: 225 HALD-NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
A N+ A Y LG + H NE ++++CF + +P+ + + + SLY
Sbjct: 396 QARQANNGEHTLAHYGLGQMYIHRNEIEEAIKCFDTVHKRLPNNTDTMKILGSLY 450
>gi|296123752|ref|YP_003631530.1| hypothetical protein Plim_3518 [Planctomyces limnophilus DSM 3776]
gi|296016092|gb|ADG69331.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
DSM 3776]
Length = 320
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
+++A R + + A + ++ D ++A L IYF+Q ++A E
Sbjct: 10 LDQARQLARQREFAAATQIYQAVIAQDPSNTAAYDGLGTIYFVQEFYQEAINCFLEVAAL 69
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
+ N G +Y K E+ L+ D C E YNLG+AH+ +++ ++
Sbjct: 70 KPVDGKPLFNAGAIYNRMGEYAKAVEIIRKGLNRDKRCAEGYYNLGIAHRKQSQWQMAIS 129
Query: 256 CFHKLQAIVPSMPEVLYQIASLY 278
+ + + P+ E + ++Y
Sbjct: 130 SYREAIRLDPAFAEAYQNLGNVY 152
>gi|392896106|ref|NP_001255000.1| Protein B0464.2, isoform a [Caenorhabditis elegans]
gi|6648105|sp|Q03560.3|YKD1_CAEEL RecName: Full=TPR repeat-containing protein B0464.2
gi|3873800|emb|CAA79544.1| Protein B0464.2, isoform a [Caenorhabditis elegans]
Length = 1150
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACT---ADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
A +L+ +F + E+E+A +A A T D+ + AF +G C A+ + + Y
Sbjct: 285 ALIHLANHFFFKKEIERAWTLAWHAATYNDCDSIKAEAFYQMGRCRHAQGQFDGAYKYYY 344
Query: 225 HALD-NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
A N+ A Y LG + H NE ++++CF + +P+ + + + SLY
Sbjct: 345 QARQANNGEHTLAHYGLGQMYIHRNEIEEAIKCFDTVHKRLPNNTDTMKILGSLY 399
>gi|374587585|ref|ZP_09660677.1| Tetratricopeptide TPR_2 repeat-containing protein [Leptonema illini
DSM 21528]
gi|373876446|gb|EHQ08440.1| Tetratricopeptide TPR_2 repeat-containing protein [Leptonema illini
DSM 21528]
Length = 692
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSSAA---TNLSFIYFLQGEVEQAEKMAEEACTAD 196
N V LRM D A++ + + S A NL+ Y E A K E A +
Sbjct: 312 NLGVVLLRMRDNQGALEAFDNALKAGGSDADVFQNLALAYERLNEPTLAAKALERALLIN 371
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELY---VHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+ LG+ ++D ++ E Y V+ D EAL LG ++ + Y DS
Sbjct: 372 PQSVEGLFQLGDLYHRQKDLLRAAENYRKIVNITPGDTNTKEALIRLGRVYREMERYQDS 431
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVR 300
+ + + P+ +VLY++ Y + + A V L V+
Sbjct: 432 ADVLGRAVTLSPNEGQVLYELGLTYRMGNRFDDAVAVWRKALQNGVK 478
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 137 LEINKAVTFLRMNDVSQA-------VDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMA 189
+ N + +R N + +A V++ S D + A L I FL+ EQA +
Sbjct: 238 MRYNLGLALIRQNKLDEAELEFNRLVEMFPS-DPLAVRALAYLGQIAFLKNRPEQAVQYY 296
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
A + NLG + D E + +AL + + NL LA++ LNE
Sbjct: 297 RRAIGLAPDEARYHYNLGVVLLRMRDNQGALEAFDNALKAGGSDADVFQNLALAYERLNE 356
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA------ 303
+ + + + I P E L+Q+ LY D+ +A++ N ++ D
Sbjct: 357 PTLAAKALERALLINPQSVEGLFQLGDLYHRQKDLLRAAE-NYRKIVNITPGDTNTKEAL 415
Query: 304 --LSQLHREM-KHEAEKCILTSAKLIAP 328
L +++REM +++ +L A ++P
Sbjct: 416 IRLGRVYREMERYQDSADVLGRAVTLSP 443
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 161 CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
DE + A NL+ + G E+A++ AE+A + A + L N + D K +
Sbjct: 163 LDESSVGALINLAIVERKLGNREEAQRYAEQAKELAPNDPAVAMILANLLLESSDPEKAE 222
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
E+Y + YNLGLA N+ ++ F++L + PS P + +A L +I
Sbjct: 223 EIYREGMSRSPDDTIMRYNLGLALIRQNKLDEAELEFNRLVEMFPSDPLAVRALAYLGQI 282
Query: 281 T 281
Sbjct: 283 A 283
>gi|428772263|ref|YP_007164051.1| hypothetical protein Cyast_0422 [Cyanobacterium stanieri PCC 7202]
gi|428686542|gb|AFZ46402.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
stanieri PCC 7202]
Length = 494
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEV---EQAEKMAEEACTADTYNSAAFV 204
+ D S+A+D+ K+ + ++ YF + ++ + E++ ++ + Y AF+
Sbjct: 256 IKDFSRAIDLDKN--YLLPYQWRGFAYTYFQKYDLALQDYEEEIKIDSVSFWGYYKRAFI 313
Query: 205 N--LGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQA 262
+ LGN A +DY L + C A N G + L +Y D++E ++++ +
Sbjct: 314 HAKLGNYLQALDDYSI-------CLTINPKCFYAYCNRGFVYFQLKDYHDAIEDYNRVLS 366
Query: 263 IVPSMPEVLYQIASLYEITGDVEQ 286
+ PS+ EV Y + +Y+I G+ Q
Sbjct: 367 LNPSLFEVYYNLGCIYQILGNHSQ 390
>gi|427708392|ref|YP_007050769.1| hypothetical protein Nos7107_3027 [Nostoc sp. PCC 7107]
gi|427360897|gb|AFY43619.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 308
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 4/172 (2%)
Query: 120 WCV-QSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFL 178
W + QS+ +A L Q L+ ++ R+ D + D ++ NL Y
Sbjct: 37 WLMAQSVNQAAVDWLNQGLQ---SIQAGRIQDAIASFQKAIQLDPKLAAGYYNLGLAYRQ 93
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G+++ A +A AD+ + AF NLG + + + + A++ D A Y
Sbjct: 94 TGQLKPAADAFYQATQADSQFAPAFANLGGALLEGNNIQQANDYLQRAIELDPKLGFAHY 153
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
NLGL + ++ ++ F K + PE Y + Y G +++A +
Sbjct: 154 NLGLVQQQQQDWERAIASFKKAAEYSQNAPEPHYHLGICYLQQGKLDKAKNA 205
>gi|390603858|gb|EIN13249.1| TPR-like protein, partial [Punctularia strigosozonata HHB-11173
SS5]
Length = 402
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIY 176
C I + S LA D+ + + D +A D + + + L ++Y
Sbjct: 182 CFDKILRNPPSPLAHADIWFQIGHVYEQQKDFMRAKDAYERVVAENPNHAKVLQQLGWLY 241
Query: 177 FLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
G Q + +A + T AD ++ ++ LG MA + Y K E Y A+ +
Sbjct: 242 HQDGSSFQNQDLAIQYLTKSLEADPSDAQSWYLLGRAYMAGQKYNKAYEAYQQAVYREGR 301
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++G+ + +N+Y D+L+ + + I P + EV + + SLYE
Sbjct: 302 NPTFWCSIGVLYFQINQYRDALDAYSRAIRINPYISEVWFDLGSLYE 348
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM---PEVLYQIASLYEITGDVEQASDVN 291
E L+ LG+ +K +Y DSL+CF K+ PS ++ +QI +YE D +A D
Sbjct: 161 EILFRLGIIYKQQAKYDDSLDCFDKILRNPPSPLAHADIWFQIGHVYEQQKDFMRAKDAY 220
Query: 292 ENLLLE 297
E ++ E
Sbjct: 221 ERVVAE 226
>gi|336365746|gb|EGN94095.1| hypothetical protein SERLA73DRAFT_96912 [Serpula lacrymans var.
lacrymans S7.3]
Length = 393
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q +++A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 228 LGWLYHQDGSSFQNQELAIQYLTKSLEADPSDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 287
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N++ D+L+ + + I P + EV + + SLYE
Sbjct: 288 YRDGRNPTFWCSIGVLYFQINQFRDALDAYSRAIRINPYISEVWFDLGSLYE 339
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM---PEVLYQIASLYEITGDVEQASDVN 291
E L+ LG+ +K ++Y DSL CF ++ PS ++ +QI +YE D +A D
Sbjct: 152 EILFRLGIIYKQQSKYEDSLGCFDRILRNPPSPLAHADIWFQIGHVYEQQKDHVRAKDAY 211
Query: 292 ENLL 295
E ++
Sbjct: 212 ERVV 215
>gi|326427391|gb|EGD72961.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 777
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 88/223 (39%), Gaps = 45/223 (20%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEA----- 192
E +KA+ F D++ V+VL T+S NL Y +G+ ++A E+A
Sbjct: 370 EYDKAIEFYE-KDLAITVEVLGEKHPSTASTYGNLGAAYHSKGDHDRAIHYYEKALAIQV 428
Query: 193 --------CTADTYN--SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN-LG 241
TA TYN AA+ N G+ A E Y K + V L YN LG
Sbjct: 429 ETLGEKHPTTASTYNNLGAAYKNKGDYDRAIECYEKALAIKVETLGEKHPSTAQTYNNLG 488
Query: 242 LAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQIASLYEITGDVEQAS----- 288
+A+K+ EY ++ + K I P + I L+ GD EQA
Sbjct: 489 IAYKNKGEYDRAIAFYEKDLTITVETLGEKHPGTATSYFNIGLLHAKRGDKEQACAYIQH 548
Query: 289 --DVNENLL-------------LEAVRNDALSQLHREMKHEAE 316
DV L L+ +R A+++ H +H +E
Sbjct: 549 ALDVFATTLGPHHPNTRKAKQNLQRIRGGAVTRQHTSTQHVSE 591
>gi|308160668|gb|EFO63143.1| Intraflagellar transport particle protein IFT88 [Giardia lamblia
P15]
Length = 831
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
D LS+ + ++HE +L SA+L+AP+I S GY +R H ++ ++++
Sbjct: 319 DDLSRYNATLRHEHTNKLLISARLLAPAIAWEESQGYAKLSDILREKGHHGISLQVQMSM 378
Query: 142 AVTFLRMNDVSQAVDVLKSCD 162
A+T L+ N+ +A D++ D
Sbjct: 379 ALTLLKKNEFEKATDIMLRID 399
>gi|413936917|gb|AFW71468.1| hypothetical protein ZEAMMB73_864118 [Zea mays]
Length = 517
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY + A + A + + S+ NL
Sbjct: 70 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 129
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D T +AL N G K + +++++ + + I P+M
Sbjct: 130 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNM 189
Query: 268 PEVLYQIASLYEITGDVEQA 287
PE +AS Y+ +G VE A
Sbjct: 190 PEAHANLASAYKDSGHVETA 209
>gi|189500702|ref|YP_001960172.1| hypothetical protein Cphamn1_1773 [Chlorobium phaeobacteroides BS1]
gi|189496143|gb|ACE04691.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
BS1]
Length = 466
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 15/163 (9%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKS--CDEMTSSAATNLSFIYFLQGEVEQ-------AE 186
++ +N A+ + A+D L S CD +YF +G + Q +E
Sbjct: 104 EMRLNLALAHFNTAEYKTALDKLDSILCDSTLEKE------MYFYRGLILQKMERYRESE 157
Query: 187 KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKH 246
K E+ + + A+ L C + Y +D D + A YN GL
Sbjct: 158 KYLEKCLALEPDFAEAWYELAFCKDVLGKMEESATCYQKTIDQDPYNVNAWYNKGLVLSK 217
Query: 247 LNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
L +Y D+LEC+ AI Y A++ ITG +E+A++
Sbjct: 218 LKKYDDALECYDMAIAIADDFSSAWYNRANVLAITGKIEEAAE 260
>gi|451980240|ref|ZP_21928638.1| exported hypothetical protein [Nitrospina gracilis 3/211]
gi|451762654|emb|CCQ89867.1| exported hypothetical protein [Nitrospina gracilis 3/211]
Length = 283
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%)
Query: 153 QAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMA 212
+ ++ L ++ L YF G +A +A + ++ A+ LG +
Sbjct: 122 EPLETLSRAQPQKANYHAKLGRAYFQLGNDAKAIDALTQAVKWNPHDEASMYKLGEIHLR 181
Query: 213 REDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY 272
+ Y K + A+ + YNLGLAH HL ++ +L+ F++ P Y
Sbjct: 182 QGHYDKAVDYLERAVSGFPFPYQRYYNLGLAHAHLKQFDKALQNFNRCVEEQPDFAPAYY 241
Query: 273 QIASLYEITGDVEQA 287
+ ++Y+ TG +QA
Sbjct: 242 NMGAVYQNTGRRQQA 256
>gi|303271811|ref|XP_003055267.1| glycosyltransferase family 41 protein [Micromonas pusilla CCMP1545]
gi|226463241|gb|EEH60519.1| glycosyltransferase family 41 protein [Micromonas pusilla CCMP1545]
Length = 1090
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 10/149 (6%)
Query: 149 NDVSQAVDVLKSCDEMTSSAATNLSFIYFL----------QGEVEQAEKMAEEACTADTY 198
DV A+D + C + + A I G+V A + E A T D
Sbjct: 331 GDVVGAIDAYEQCLRVNPNHALGRGNISIALSEHATAVKASGDVHLAIRGYERALTFDPN 390
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+ A NLG + + Y H L C EA NLG+ H+ N ++EC++
Sbjct: 391 AAEATYNLGVAQAEVGEIDRAIIAYEHTLRLKPNCAEAWNNLGVLHRERNNVERAVECYN 450
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ AI P+ + L + +Y G+ A
Sbjct: 451 RAIAIAPAFAQPLNNVGVVYTTQGNAGAA 479
>gi|431907335|gb|ELK11308.1| Tetratricopeptide repeat protein 6 [Pteropus alecto]
Length = 1287
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 14/236 (5%)
Query: 81 NDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEIN 140
N + H E +A+K L + I+ S GYN Q A +E++
Sbjct: 1021 NSYMEYGHDEATKQAQKDFLRALHFDPTYIKARISLGYNLQAQEKFQKAWHHFTIAIEVD 1080
Query: 141 ---------KAVTFLRMNDVSQAVDVLKSCDEMTSSAA--TNLSFIYFLQGEVEQAEKMA 189
+AV L+M+D A+ + + ++ ++A TN I+ G+ + A K
Sbjct: 1081 PKSYLAYEGRAVVCLQMSDNFAAMQDINTAIKINTTAEFLTNRGVIHEFMGQQQNAMKDY 1140
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
+ A + + S A+ N GN + + + + + AL D A+ N +A+ L +
Sbjct: 1141 QAAVSLNPTYSLAYFNAGNIYLHHRQFSQASDYFSKALKFDPENKCAMMNRAIANTILKK 1200
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLLEAVRNDAL 304
Y D+ E F + P V + A LY E A D+++ L L+ NDAL
Sbjct: 1201 YEDAREDFANVVENCPFWAAVYFNRAQLYCCLKQYELAEEDLSKALSLKP--NDAL 1254
>gi|288560424|ref|YP_003423910.1| serine/threonine protein kinase with TPR repeats
[Methanobrevibacter ruminantium M1]
gi|288543134|gb|ADC47018.1| serine/threonine protein kinase with TPR repeats
[Methanobrevibacter ruminantium M1]
Length = 775
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 112 DNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVL----KSCDEMTSS 167
+NF + Y+ ++ NS+ D+ IN A+ ++ +A++ L K DE +
Sbjct: 322 ENFISNYDKAIELNPNSS------DIRINYAINLIKYGYYDEALNHLNLAKKIFDENNKN 375
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA---------AFVNLGNCAMAREDYVK 218
+ L +YF G Q++ +A + Y +A ++VNLGN E Y K
Sbjct: 376 FVS-LDRLYFNFGHAYQSKGYLNKAI--ENYENAIEINENYLESYVNLGNIYKELELYEK 432
Query: 219 GKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHK 259
E Y ALD + AL N+G A+ L Y DS CF+K
Sbjct: 433 ALEKYQLALDINPNFFMALINMGEAYSFLGNYEDSENCFYK 473
>gi|194334458|ref|YP_002016318.1| hypothetical protein Paes_1653 [Prosthecochloris aestuarii DSM 271]
gi|194312276|gb|ACF46671.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
Length = 466
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIY---FLQG--EVEQAEKMAE 190
++++N A++ + + S A++ L + +T S +F Y LQ +AEK E
Sbjct: 104 EMQLNLALSHFNIANYSAALEELDNM--VTDSTLEKETFFYRGLILQKLERYPEAEKNLE 161
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
+ + + A+ L C + + Y+ A+D D + A YN GL L Y
Sbjct: 162 KCLDMEPAFTEAWYELAYCKDLLGKLEESAKCYLEAIDQDPYNVNAWYNRGLVLSKLKRY 221
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
++LEC+ AI Y A++ ITG +E A++
Sbjct: 222 DEALECYDMALAIADDFSSAWYNKANVLAITGMIEDAAE 260
>gi|159110623|ref|XP_001705562.1| Intraflagellar transport particle protein IFT88 [Giardia lamblia
ATCC 50803]
gi|157433649|gb|EDO77888.1| Intraflagellar transport particle protein IFT88 [Giardia lamblia
ATCC 50803]
Length = 854
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 82 DALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK 141
D LS+ + ++HE +L SA+L+AP+I S GY +R H ++ ++++
Sbjct: 342 DDLSRYNATLRHEHTNKLLISARLLAPAIAWEESQGYAKLSDILREKGHHGISLQVQMSM 401
Query: 142 AVTFLRMNDVSQAVDVLKSCD 162
A+T L+ N+ +A D++ D
Sbjct: 402 ALTLLKRNEFEKATDIMLRID 422
>gi|15606922|ref|NP_214303.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
gi|2984175|gb|AAC07708.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
Length = 342
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 142 AVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ ++ + +A + K S + S A NL +Y+ G E+A K +EA + Y
Sbjct: 66 GLAYMEAKEYKKAEESFKKALSINPNYSEARKNLGILYYKLGRYEEALKYLQEAANDEYY 125
Query: 199 NSA--AFVNLGNCAMARED---YVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
AF L A++D YV+ E A+ + ++A L A+++L +Y ++
Sbjct: 126 EKKHEAFYYLAKVYEAKQDLKNYVRYLE---KAVAYNPNFVQAQLELAQAYENLGKYEEA 182
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHRE-MK 312
+ + L + P + Y++A +Y GD E+A ++ + LL + + L+ RE +K
Sbjct: 183 EKIYKSLLLNGFNKPFLKYKLAEVYYKKGDYERAREIIKELLYK----ENLTNEQREKVK 238
Query: 313 HEAEKCILTSA-KLIAPSI 330
K +L KLI P +
Sbjct: 239 ELLTKVLLAQQRKLIIPRV 257
>gi|115374950|ref|ZP_01462222.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310819224|ref|YP_003951582.1| hypothetical protein STAUR_1951 [Stigmatella aurantiaca DW4/3-1]
gi|115368077|gb|EAU67040.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309392296|gb|ADO69755.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 641
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 28/244 (11%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
R++D +A DE +SA NL +G + +A++ +A ++ A NL
Sbjct: 158 RVDDAIEAYREALKLDEGLTSARVNLGKALAEKGRLAEAKETLLKAIERAPLDAEARYNL 217
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G M D Y AL+ A NLG+AH L +++ ++E F K A P
Sbjct: 218 GVLRMRENDLAGAMGEYRKALELQPRHASAHNNLGVAHDELGQHAQAVEAFKKAIAAEPK 277
Query: 267 MPEVLYQIASLYEITGDVEQASDVNEN-LLLEAVRNDALSQLHREMKH------EAEKCI 319
E + + Y GD +A+ E LLLE R+ S + ++ H + ++ +
Sbjct: 278 YAEAHFNLGLAYFRLGDNARATKSFEKALLLEPRRS---SGPYTQLGHLYLAQGKKDRAV 334
Query: 320 LTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLK 379
+ +A S +D AH LA+ +L V AV LK
Sbjct: 335 EAFKRALAASGDDGLKT----------TEAHQGLAR--------AYLAQGRVDDAVATLK 376
Query: 380 SCDE 383
+ E
Sbjct: 377 TAVE 380
>gi|406705640|ref|YP_006755993.1| sulfotransferase domain-containing protein [alpha proteobacterium
HIMB5]
gi|406651416|gb|AFS46816.1| TPR subfamily 2 repeat-containing sulfotransferase domain protein
[alpha proteobacterium HIMB5]
Length = 512
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 56/111 (50%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+ +A K+ E + N+ N+G +++Y K ++ L + I L N
Sbjct: 53 GKFNEAIKIMELGLLHNPKNTHFLNNIGVSYYNQQNYTKANYYFIRGLTENPNHISILNN 112
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
LG ++ LN +++++ ++K I S+ + L+ ++ YE G+ E+A D+
Sbjct: 113 LGNLYRDLNSTNEAIKYYNKCIEINDSLIQPLFNLSLCYESLGEFEKAKDI 163
>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 386
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
NK V + +A++ + D N + G+ E+A + E+A +
Sbjct: 89 NKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEIN 148
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
N+ A+ N GN + Y + E Y AL +A +EA YN L + L Y ++LEC
Sbjct: 149 QKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALILEELKRYDEALEC 208
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ + I P +L + G E+A + E L
Sbjct: 209 YERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKAL 247
>gi|340617491|ref|YP_004735944.1| aerotolerance protein BatC [Zobellia galactanivorans]
gi|339732288|emb|CAZ95556.1| Aerotolerance protein BatC [Zobellia galactanivorans]
Length = 285
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 165 TSSAATNLSFIYFLQ-------GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYV 217
S+A NL Y+ + G +QA ++A AD + A+ N+GN M R++Y
Sbjct: 65 NSAAPYNLGNAYYAKETYSEAFGRFKQAGELA--TDKADKH--RAYHNMGNVFMKRKEYQ 120
Query: 218 KGKELYVHALDNDATCIEALYNLGLAHKHL 247
K E Y AL ND T E YNL LA K L
Sbjct: 121 KAIEAYKEALRNDPTDDETRYNLALAKKML 150
>gi|336468586|gb|EGO56749.1| hypothetical protein NEUTE1DRAFT_65565 [Neurospora tetrasperma FGSC
2508]
gi|350289144|gb|EGZ70369.1| TPR-like protein [Neurospora tetrasperma FGSC 2509]
Length = 916
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%)
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
++ +AD ++ ++ LG C M + Y K E Y A+ D ++G+ + +N+Y
Sbjct: 285 QSVSADQTDAQSWYLLGRCYMQLQKYPKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQY 344
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D+L+ + + + P + EV Y + +LYE
Sbjct: 345 RDALDAYSRAIRLNPFISEVWYDLGTLYE 373
>gi|340623460|ref|YP_004741913.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
gi|339903728|gb|AEK19170.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
Length = 344
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
+A D+ NS AF LG +Y K E+Y +L+ ++ EA N G+ ++ Y
Sbjct: 84 KALLIDSENSEAFNGLGTVLSKTGNYQKALEMYDKSLNINSENSEAWKNKGITLTNMQSY 143
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD-VNENLLLEAVRNDAL----- 304
S+++ECF K +I +V Y G E++ D N+ LL++ AL
Sbjct: 144 SEAIECFDKSISINAKNSDVWYNKGEAQFKLGQYEKSIDSYNKALLIDEKMETALLGKGN 203
Query: 305 SQLHREMKHEAEKCILTSAKLIAPSIE-------------DNFSNGYNWCVQSIRNSAHS 351
S L + A +C +A+ I P E +NF + + +++ + +
Sbjct: 204 SYLKLQNYESAIEC-FNTAETINPKSEYPPYYKADAYRDTENFEDALKYYDEALEINPSN 262
Query: 352 SLAQDLEINKAVTFLRMNDVSQAV 375
+ D+ INK + F +M + S A+
Sbjct: 263 A---DVLINKGICFDKMKNYSAAI 283
>gi|297829706|ref|XP_002882735.1| hypothetical protein ARALYDRAFT_478494 [Arabidopsis lyrata subsp.
lyrata]
gi|297328575|gb|EFH58994.1| hypothetical protein ARALYDRAFT_478494 [Arabidopsis lyrata subsp.
lyrata]
Length = 897
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 37/247 (14%)
Query: 107 APSIEDNFSNGYNWC-------VQSIRNSAHSSLA----------QDLE--INKAVTFLR 147
+P +E+ FSNG + RN +LA +++E I K +
Sbjct: 13 SPIVENGFSNGSRSSPTLSYANILRARNKFADALALYEAMLEKDSKNVEAHIGKGICLQT 72
Query: 148 MNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA- 202
N + A D D + A T+ ++ +G + +A + ++A AD +Y AA
Sbjct: 73 QNKGNLAFDCFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMADASYKPAAE 132
Query: 203 -----FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+LG + +G + Y AL D A YNLG+ + + +Y ++L C+
Sbjct: 133 CLAIVLTDLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNALSCY 192
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHR 309
K P E + +Y+ GD+E A E L E +N+ AL+ L
Sbjct: 193 EKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGT 252
Query: 310 EMKHEAE 316
++K E +
Sbjct: 253 KVKLEGD 259
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G+V Q
Sbjct: 208 NMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDVTQGVAYY 267
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 268 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDN 327
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL------EAVRNDA 303
++EC+ +I P+ + L + +Y + G ++ A+ + E +L EA N
Sbjct: 328 LDKAVECYQMALSIKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNN-- 385
Query: 304 LSQLHRE 310
L L+R+
Sbjct: 386 LGVLYRD 392
>gi|145537418|ref|XP_001454423.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422183|emb|CAK87026.1| unnamed protein product [Paramecium tetraurelia]
Length = 537
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAE---EA 192
D NK +T +N ++A++ + A ++ G ++Q E+ E EA
Sbjct: 250 DAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNEA 309
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+ + + N GN Y + E Y A+ + EA N G+A ++LN+Y +
Sbjct: 310 ISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEE 369
Query: 253 SLECFHKLQAIVPSMPEVLY 272
+ +C+++ +I P E Y
Sbjct: 370 AFKCYNEAISINPKFAEAWY 389
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEV-------EQAEKMAEEAC 193
K +T + +A++ C S + +++F +G V +A + EA
Sbjct: 289 KGITLGNLQQYEEAIE----CYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAI 344
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+ + + A+ N G Y + + Y A+ + EA YN G +LN++ ++
Sbjct: 345 SINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEA 404
Query: 254 LECFHKLQAIVPSMPEVLY 272
+ECF++ +I P Y
Sbjct: 405 IECFNEAISINPKYASAWY 423
>gi|328701579|ref|XP_001951487.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
[Acyrthosiphon pisum]
Length = 1177
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQ------GEVEQAEKMA 189
D+ + A FL++ + +A + ++ S L + L+ G+++ M
Sbjct: 198 DVRLGMAHCFLKLGNAEKARLAFERAIQLDSKCVGALVGLAILKLNGENPGDIKLGVNML 257
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T DT N +L N ++DY K + L HAL +N+A E+ Y + A
Sbjct: 258 SKAYTIDTTNPMVLNHLSNHFFFKKDYTKYELLARHALQNTENEAMRAESCYQMARAFHV 317
Query: 247 LNEYSDSLECFHKLQAIVP---SMPEVLYQIASLYEITGDVEQASDVNENLL 295
N Y + + +++ P +P Y + +Y GD+E A+ E +L
Sbjct: 318 QNNYDQAFQYYYQATQFAPVTFVLPH--YGLGQMYIYGGDMENAAQCFEKVL 367
>gi|254569172|ref|XP_002491696.1| General transcriptional co-repressor, acts together with Tup1p
[Komagataella pastoris GS115]
gi|238031493|emb|CAY69416.1| General transcriptional co-repressor, acts together with Tup1p
[Komagataella pastoris GS115]
gi|328351799|emb|CCA38198.1| General transcriptional corepressor CYC8 [Komagataella pastoris CBS
7435]
Length = 807
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ + LG M+R DY + Y A++ DA ++G+ + +++Y D+L+
Sbjct: 303 DNSDAQTWYQLGRVHMSRGDYTSAYDAYQQAVNRDARNPTFWCSIGVLYYQISQYRDALD 362
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 363 AYTRAIRLNPYISEVWYDLGTLYE 386
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVN 291
E + LG+ +KH + +LECF + + PS P+V +QI ++ E D A D
Sbjct: 199 EIYFRLGIIYKHQGKLQQALECFRYILPVPPSPLTQPDVWFQIGAVLEQQHDFNGARDAY 258
Query: 292 ENLL 295
E +L
Sbjct: 259 ERVL 262
>gi|255716750|ref|XP_002554656.1| KLTH0F10428p [Lachancea thermotolerans]
gi|238936039|emb|CAR24219.1| KLTH0F10428p [Lachancea thermotolerans CBS 6340]
Length = 795
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 46/84 (54%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D+ ++ + +LG M R DY + + HA++ D+ ++G+ + +++Y D+L+
Sbjct: 308 DSTDATTWYHLGRIHMVRNDYTAAYDAFQHAVNRDSRNPTFWCSIGVLYYQISQYRDALD 367
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 368 AYTRAIRLNPYISEVWYDLGTLYE 391
>gi|336263976|ref|XP_003346767.1| regulator of conidia morphology [Sordaria macrospora k-hell]
gi|380091474|emb|CCC10970.1| putative regulator of conidia morphology [Sordaria macrospora
k-hell]
Length = 886
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 149 NDVSQAVDVLKSCDEMTSSAATNLSFIYFLQG-EVEQAEKMAE---EACTADTYNSAAFV 204
+ QA + + D + L +++ Q V EK E ++ AD ++ ++
Sbjct: 200 DGAKQAYERVLQRDPKHAKVLQQLGWLHHQQSNSVASQEKAIEYLNQSVAADQTDAQSWY 259
Query: 205 NLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
LG C M + Y K E Y A+ D ++G+ + +N+Y D+L+ + + +
Sbjct: 260 LLGRCYMQLQKYPKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLN 319
Query: 265 PSMPEVLYQIASLYE 279
P + EV Y + +LYE
Sbjct: 320 PFISEVWYDLGTLYE 334
>gi|83311235|ref|YP_421499.1| TPR repeat-containing protein [Magnetospirillum magneticum AMB-1]
gi|82946076|dbj|BAE50940.1| TPR repeat [Magnetospirillum magneticum AMB-1]
Length = 548
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%)
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
F G +E A E D N+AA LG+ A R D +L + D I+A
Sbjct: 18 FNGGNLEMAAAECERMLGIDRRNTAAMHILGSVAFRRGDPAGAADLLAKVVKQDPGRIQA 77
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNEN 293
+ LG A L+ +SD+ F K+ A P P Y + G +++A+ V E
Sbjct: 78 VITLGEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLGLALRGLGRLDEAAAVLER 134
>gi|196002938|ref|XP_002111336.1| hypothetical protein TRIADDRAFT_24608 [Trichoplax adhaerens]
gi|190585235|gb|EDV25303.1| hypothetical protein TRIADDRAFT_24608, partial [Trichoplax
adhaerens]
Length = 859
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 144 TFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAF 203
TF + D++QA+ + + T+ TN I+ + +V A + + A S A+
Sbjct: 659 TFAALTDINQAIKI-----KQTAELYTNRGVIHLFRNDVVNAMRDYQTAIALTPTYSLAY 713
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI 263
N N + + + Y AL+ DA AL+N G+A + +Y +LE F+K I
Sbjct: 714 FNAANLYFIQRRFQQALMYYDKALEFDANDESALHNRGVAKIMMKDYEGALEDFNKTIDI 773
Query: 264 VPSMPEVLYQIASLYEITGDVEQA 287
P + +L I G +A
Sbjct: 774 YPYGAHAYFNRGNLLAIMGRYGEA 797
>gi|326428541|gb|EGD74111.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 528
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQG 180
S N+ ++ + + NKA+ L ++ V+ L T+ NL Y+ +G
Sbjct: 185 STSSTYNNLGNAYKKKGQYNKAIQ-LYEKALAIKVEALGEKHPSTAQTYNNLGSAYYSKG 243
Query: 181 EVEQAEKMAEEA-------------CTADTYNSAAFVNLGNCAMARED-------YVKGK 220
E ++A + E+A TA TYN NLGN + + Y K
Sbjct: 244 EYDRAIEQYEKALAIRVETLGEKHPSTATTYN-----NLGNAYDDKGEHDRAIAFYEKAL 298
Query: 221 ELYVHALDNDATCIEALYN-LGLAHKHLNEYSDSLECFHKLQAIV--------PSMPEVL 271
+ V L A Y LG+A+KH EY ++E + K AI PS E
Sbjct: 299 AITVETLGEKHPSTAASYGSLGVAYKHKGEYDKAIELYEKALAIKVEMLGEKHPSTAETY 358
Query: 272 YQIASLYEITGDVEQA 287
+ I L++ GD EQA
Sbjct: 359 FNIGLLHDDRGDKEQA 374
>gi|113476143|ref|YP_722204.1| hypothetical protein Tery_2526 [Trichodesmium erythraeum IMS101]
gi|110167191|gb|ABG51731.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 1154
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 14/240 (5%)
Query: 53 EQFGHADSHNIELTFSNINRKKNARAVRNDALS--QLHREMKHEAEKCI-LTSAKLIAPS 109
++F ++HNI+ ++ +K++ + L+ Q + + E I L + LI+
Sbjct: 236 QKFARENNHNIKEYVESVIQKQSTNFKDQEKLTVKQYKEAIISDGENGIELATINLISEQ 295
Query: 110 IEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAV--DVLKSCDEMTSS 167
DNF N Y+ S H + ++L+ N T + + +LK +
Sbjct: 296 KLDNFENTYD------NFSVHDDVEENLKKNGKFTTFEYQKLESGLTSQILKLP---AAE 346
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A N + + QG + A ++A +S ++V LGN + + Y L
Sbjct: 347 AYINQANLALKQGNLASAIASCKQALKIQPDHSPSYVILGNAFYQQNNLEAALHAYRQGL 406
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ D E N+G + L +Y +L + K + P + + + I L++ G V++A
Sbjct: 407 EIDPELAEVQGNIGSVYLQLGQYKQALFHYQKAIDLKPGLAGIYWNIGKLFQCLGKVDEA 466
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A L+ +Y +QG + +EA + ++A++ LGN ++ K Y AL
Sbjct: 41 AYKKLAEVYLMQGNFDAGISACKEAVKIQPHFASAYLTLGNIFQSQNLLEKAINTYYEAL 100
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + N+G + L E++ ++ + K I ++ V + +++ + G+ EQA
Sbjct: 101 SIEPNFAQVYANIGSVYYKLGEFNLAISNYQKALEINSNLASVQLMLGNVFSLIGEFEQA 160
Query: 288 SDVNENLL 295
+ LL
Sbjct: 161 IYCYQKLL 168
>gi|383762533|ref|YP_005441515.1| hypothetical protein CLDAP_15780 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382801|dbj|BAL99617.1| hypothetical protein CLDAP_15780 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 184
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 9/163 (5%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTA 195
+ ++ LRMN A++ L E + A NL Y L + +AE++ +A
Sbjct: 14 LAESAWLLRMNQPQAALEKLLPLYEQAPTNPDVALNLGSAYILMAKWRKAEEVLGKAAQL 73
Query: 196 DTYNSAAFVNLGNCAMAR------EDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
T N+ ++NL + R + + Y AL+ D Y+LGL +K +
Sbjct: 74 HTDNAMIWINLAAAHLGRLELSGPQQQERAIRAYRRALEIDPQAPNVHYHLGLIYKERGQ 133
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNE 292
++++E F + P+ + Y I L ++ + D N+
Sbjct: 134 LAEAIEWFRGALTVNPADQDAAYWIERLSKLLEAAQSTPDAND 176
>gi|392597002|gb|EIW86324.1| TPR-like protein, partial [Coniophora puteana RWD-64-598 SS2]
Length = 494
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q +++A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 317 LGWLYHQDGSSFQNQELAVQYLTKSLEADPSDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 376
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N++ D+L+ + + I P + EV + + SLYE
Sbjct: 377 YRDGRNPTFWCSIGVLYFQINQFRDALDAYSRAIRINPYISEVWFDLGSLYE 428
>gi|330801223|ref|XP_003288629.1| hypothetical protein DICPUDRAFT_152881 [Dictyostelium purpureum]
gi|325081356|gb|EGC34875.1| hypothetical protein DICPUDRAFT_152881 [Dictyostelium purpureum]
Length = 812
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%)
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
++ +D ++ ++ LG C M ++ Y K + Y A+ D ++G+ + +N+Y
Sbjct: 314 KSIDSDPSDAQSWYLLGRCYMTQQKYKKAYDAYQQAVYRDGRNPTFWCSIGVLYYQINQY 373
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D+L+ + + + P + EV Y + +LYE
Sbjct: 374 RDALDAYTRAIRLNPFLSEVWYDLGTLYE 402
>gi|452821408|gb|EME28439.1| hypothetical protein Gasu_41290 [Galdieria sulphuraria]
Length = 677
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 158 LKSCDEMTSSAAT--NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMARED 215
LK+ E + A + L +I +G E ++ + A AD + + LG MA+++
Sbjct: 267 LKALKESPNHAKSLQQLGWIEHEEGRSEDGFQLLKRAVEADPNDGQGWYLLGRLHMAKKE 326
Query: 216 YVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA 275
Y + Y HA+ ++ ++G+ + + ++ D+++ + + + P++ EV Y +
Sbjct: 327 YRSAYDNYQHAVYCNSRNPRFWCSIGVLYYQMGQHRDAMDAYTRAIRLNPNLSEVWYDLG 386
Query: 276 SLYE 279
+LYE
Sbjct: 387 TLYE 390
>gi|440749241|ref|ZP_20928489.1| hypothetical protein C943_1053 [Mariniradius saccharolyticus AK6]
gi|436482246|gb|ELP38369.1| hypothetical protein C943_1053 [Mariniradius saccharolyticus AK6]
Length = 538
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 161 CDEMTSSAATNLSFIYFLQGEVEQAEK--MAEEACTAD---TYNSAAFVNLGNCAMARED 215
D A +LS +YF V+ E A++ TA + A +GN A+A+ D
Sbjct: 39 TDTARFRALIDLSHLYFSTDYVKSMEYAIQAKDLATAKDLKKHELTALTQMGNVAIAQGD 98
Query: 216 YVKGKELYVHALD-----NDATCIEALYN-LGLAHKHLNEYSDSLECFHKLQAIVPS--- 266
Y + L+ ++L D + I ++ N LG ++ + EY +LEC+ Q ++ +
Sbjct: 99 YKQAATLFFNSLKEYEELKDTSGIISMNNNLGASYDRMGEYDKALECYFTAQELMNASNL 158
Query: 267 -------MPEVLYQIASLYEITGDVEQA 287
+P V IA++Y+ GD + A
Sbjct: 159 TERKKVVLPTVYNNIANIYQTKGDPKSA 186
>gi|333987314|ref|YP_004519921.1| hypothetical protein MSWAN_1100 [Methanobacterium sp. SWAN-1]
gi|333825458|gb|AEG18120.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 197
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
NK VT+ + +A+D D + A N + G+ ++A K +++ D
Sbjct: 50 NKGVTYGLLGKAQEALDYFDKVLELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELD 109
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
NS + N G E Y + + + AL + ++A N GLA L +Y ++LEC
Sbjct: 110 PNNSETWYNKGISLKKLEKYQEALKSFNKALKSYPNYVDAWNNKGLALAQLKKYQEALEC 169
Query: 257 FHKLQAIVPS 266
F K+ + P+
Sbjct: 170 FDKVLKLDPN 179
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 140 NKAVTFLRMNDVSQAV---DVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
NK + + +A+ D + D A N Y L G+ ++A ++ D
Sbjct: 16 NKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLELD 75
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKEL---YVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
N+ A+ N G +A ED K +E Y +L+ D E YN G++ K L +Y ++
Sbjct: 76 PKNAEAWNNKG---LAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEA 132
Query: 254 LECFHKLQAIVPS 266
L+ F+K P+
Sbjct: 133 LKSFNKALKSYPN 145
>gi|406982607|gb|EKE03902.1| TPR Domain containing protein [uncultured bacterium]
Length = 666
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 10/177 (5%)
Query: 118 YNWCVQSIRNS-AHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLS 173
YN +++ + S +DL + + ++ N ++A + D +SSA +
Sbjct: 460 YNTAIENYEKAIVQDSSNKDLFLAFGNSLMKSNKTTEAKGAYEKALEIDPASSSAYIGIG 519
Query: 174 FIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATC 233
+++ E+ +A +A D N A + LGN + ++ + Y L+ D
Sbjct: 520 DVHYKNQELNKATDAYNKALDLDRRNVGALIKLGNIYKEKNRLLEAQNYYERTLEIDPAN 579
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIV---PSMPEVLYQIASLYEITGDVEQA 287
I A YNL L L E+ D+ + Q I+ P PEV Y +A + E D + A
Sbjct: 580 INAKYNLALI---LVEFGDTKQAKTYYQQIIQSSPEFPEVYYALAIVNEKERDYKNA 633
>gi|406889463|gb|EKD35644.1| hypothetical protein ACD_75C01829G0002 [uncultured bacterium]
Length = 209
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 150 DVSQAVDVL-KSCDEMTSS--AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
D+ Q + L K C E S A +L +Y G V +A K E+A D +S + +NL
Sbjct: 8 DLPQVIAELEKKCKEHPQSVMAFHHLGLVYMKAGRVAEAIKALEKAIGLDDLSSESMINL 67
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G + + K KEL AL + +A NLGL + +E+ ++ + K P
Sbjct: 68 GAIHFGQGNLEKAKELNERALAVNPESAQAHANLGLIWQQQSEFDKAIAAYEKAIKQDPK 127
Query: 267 MPEVLYQIASLYEITGD 283
+ + S+ + G+
Sbjct: 128 LASAWMNLTSVLTMKGE 144
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 142 AVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ +++ V++A+ L+ D+++S + NL I+F QG +E+A+++ E A +
Sbjct: 34 GLVYMKAGRVAEAIKALEKAIGLDDLSSESMINLGAIHFGQGNLEKAKELNERALAVNPE 93
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
++ A NLG + ++ K Y A+ D A NL
Sbjct: 94 SAQAHANLGLIWQQQSEFDKAIAAYEKAIKQDPKLASAWMNL 135
>gi|299755197|ref|XP_001828491.2| TPR-containing protein Mql1 [Coprinopsis cinerea okayama7#130]
gi|298411113|gb|EAU93324.2| TPR-containing protein Mql1 [Coprinopsis cinerea okayama7#130]
Length = 1127
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q + +A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 188 LGWLYHQDGSAFQNQDLAIQYLTKSLEADPTDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 247
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + I P + EV + + SLYE
Sbjct: 248 YRDGRNPTFWCSIGVLYFQINQYRDALDAYSRAIRINPYISEVWFDLGSLYE 299
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM---PEVLYQIASLYEITGDVEQASDVN 291
E L+ LG+ +K +Y +SLECF ++ PS ++ +QI ++E D +A D
Sbjct: 112 EILFRLGIIYKQQGKYQESLECFDRILRNPPSPLAHADIWFQIGHVFEQQKDYHRAKDAY 171
Query: 292 ENLLLE 297
E ++++
Sbjct: 172 ERVVMD 177
>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3418
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 12/171 (7%)
Query: 129 AHSSLAQDLEINKAVTFLRMN---------DVSQAVDVLKSCDEMTSS---AATNLSFIY 176
A S Q L I TF N ++ Q + K +++ + NL IY
Sbjct: 2978 AIKSFDQSLSIQPTNTFTLFNLALCHGELGNIKQEKKMYKEIQKISPNDRKMLNNLGIIY 3037
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
+G+ E+A ++ + D Y F NLG C A+ DY + D +E
Sbjct: 3038 RQKGKYEKAIQLFSQCIKLDQYFCDYFTNLGLCYYAKGDYDGAINYFQKGYTLDRINVEC 3097
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L NL A K E +++ K+ I P+ Y + + + G++ A
Sbjct: 3098 LLNLASALKAKGEPQQAIKYLQKIIKINPNYTAAYYNLGIIQKQNGNISDA 3148
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 57/112 (50%)
Query: 178 LQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
LQ ++A +++ D+ N+ + NL + + ++ Y+ + + A
Sbjct: 3243 LQENYQEALIYFKQSVQIDSENAKYYYNLADIYNCLKMPIEEINCYMKCIQLNPNFERAH 3302
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
YNLG+A++++ Y +++ CF K I PS + + + ++Y + + E++++
Sbjct: 3303 YNLGIAYENIKNYKEAISCFEKCIEIAPSNDQYFFSLGNIYSLQRNFEKSNE 3354
>gi|85110209|ref|XP_963316.1| hypothetical protein NCU06842 [Neurospora crassa OR74A]
gi|28881189|emb|CAD70370.1| related to TPR-containing protein Mql1 [Neurospora crassa]
gi|28924992|gb|EAA34080.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|49618689|gb|AAT67994.1| RCM-1 [Neurospora crassa]
Length = 917
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 149 NDVSQAVDVLKSCDEMTSSAATNLSFIYFLQG-EVEQAEKMAE---EACTADTYNSAAFV 204
+ QA + + D + L +++ Q V EK E ++ AD ++ ++
Sbjct: 239 DGAKQAYERVLQRDPKHAKVLQQLGWLHHQQSNSVASQEKAIEYLNQSVAADQTDAQSWY 298
Query: 205 NLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
LG C M + Y K E Y A+ D ++G+ + +N+Y D+L+ + + +
Sbjct: 299 LLGRCYMQLQKYPKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLN 358
Query: 265 PSMPEVLYQIASLYE 279
P + EV Y + +LYE
Sbjct: 359 PFISEVWYDLGTLYE 373
>gi|325106717|ref|YP_004267785.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
gi|324966985|gb|ADY57763.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
Length = 1391
Score = 47.8 bits (112), Expect = 0.012, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK-----ELYVHALDNDATCI 234
G AE+ + D ++ A NL ARE GK Y LD D C
Sbjct: 161 GRSTDAERCYRDIIDRDPWHLFAVHNL-----ARELQFAGKLAAAESFYEQTLDIDPNCA 215
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNE 292
A NLG+ ++ +S++ C K + ++PS+P+V +A++ E G+ ++ E
Sbjct: 216 SAWNNLGVVYQTRGNFSEARRCMEKARQLLPSLPDVHNNLANVLEALGEAGSCKEMFE 273
Score = 39.7 bits (91), Expect = 2.8, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 13/169 (7%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD---NDATCIEA 236
G++E+A K E A+ F LG E + + Y +L N++ +E
Sbjct: 90 GQLEKARKSCENVLAAEPNEPVMFTLLGRICETEEKWTEAARHYEESLRIGLNNSETLET 149
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDV-------EQASD 289
L +LG + + +D+ C+ + P ++ +A + G + EQ D
Sbjct: 150 LLHLGDCYSKVGRSTDAERCYRDIIDRDPWHLFAVHNLARELQFAGKLAAAESFYEQTLD 209
Query: 290 VNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIA--PSIEDNFSN 336
++ N A N + R EA +C+ + +L+ P + +N +N
Sbjct: 210 IDPN-CASAWNNLGVVYQTRGNFSEARRCMEKARQLLPSLPDVHNNLAN 257
>gi|443317371|ref|ZP_21046784.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 6406]
gi|442783060|gb|ELR92987.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 6406]
Length = 304
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 3/154 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N + ++ QAVD L+ E+ +A NL ++ +G++E A A
Sbjct: 118 NLGASLWEGGNLDQAVDYLERAIEIQPDLGNAHYNLGLVHMARGDLESARAALHRATELT 177
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ +LG M + + A+ + +EA YNLG+A Y ++LE
Sbjct: 178 PSAPEPYFHLGRLYMQQRQLPAAIAAFEQAITRFSGYVEAHYNLGVALYAQGSYPEALES 237
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
F + P+ Y + GD E+A V
Sbjct: 238 FRTTTDLNPNYANAYYSAGLAFTRLGDYEEAEGV 271
>gi|406601795|emb|CCH46620.1| General transcriptional corepressor [Wickerhamomyces ciferrii]
Length = 838
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIY 176
C + I + + L Q D+ + D + A D + E A L +Y
Sbjct: 214 CFRYILPNPPAPLTQPDVWFQIGAVLEQQRDYNGAKDAYQKVLEANPKHAKVLQQLGCLY 273
Query: 177 FLQG----EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
QG + E A ++ ++ D ++ ++ +LG M+R DY + + A++ DA
Sbjct: 274 SQQGSNFIDPEIALRLLSQSLEIDPSDAHSWYHLGRVHMSRGDYTSAYDAFQQAVNRDAR 333
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
++G+ + +++Y D+L+ + + + P + EV Y + +LYE
Sbjct: 334 NPTFWCSIGVLYYQISQYRDALDAYTRAIRLNPYISEVWYDLGTLYET 381
>gi|341038756|gb|EGS23748.1| hypothetical protein CTHT_0004500 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 896
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMA----EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y +A++ A E++ A+ ++ ++ LG C M + Y K E Y A+
Sbjct: 260 LGWLYHNSSPSYEAQERAIEYLEKSVAANQADAQSWYLLGRCYMQLQKYPKAYEAYQQAV 319
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 320 YRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPDISEVWYDLGTLYE 371
>gi|422293860|gb|EKU21160.1| hypothetical protein NGA_2056900, partial [Nannochloropsis gaditana
CCMP526]
Length = 100
Score = 47.8 bits (112), Expect = 0.012, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
AL+NLG+A+ L SD+ + + KL + P PEVLYQ+ + E G +A + LL
Sbjct: 3 ALFNLGVANLRLGRLSDAQDAYEKLHTLTPHCPEVLYQLGHIAEGQGQASEAIRWFQVLL 62
Query: 296 LE 297
E
Sbjct: 63 AE 64
>gi|328770738|gb|EGF80779.1| hypothetical protein BATDEDRAFT_88102 [Batrachochytrium
dendrobatidis JAM81]
Length = 510
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A +++ +D ++ + LG C MA++ Y + Y A+ D ++G+
Sbjct: 242 ERAISCLKQSLDSDPADAQTWYLLGRCYMAQQKYNDAYDAYQQAVYRDGRNPTFWCSIGV 301
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N+YSD+L+ + + + P + EV Y + +LYE
Sbjct: 302 LYYQINQYSDALDAYSRAIRLNPYISEVWYDLGTLYE 338
>gi|403419603|emb|CCM06303.1| predicted protein [Fibroporia radiculosa]
Length = 1145
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q +++A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 269 LGWLYHQDGSSFQNQEVAIQYLTKSLEADPTDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 328
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + I P + EV + + SLYE
Sbjct: 329 YRDGRNPTFWCSIGVLYFQINQYRDALDAYSRAIRINPYISEVWFDLGSLYE 380
>gi|255579381|ref|XP_002530535.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223529939|gb|EEF31867.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 930
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT-YNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A + ++A AD Y AA +LG
Sbjct: 113 DPQNACALTHCGILYKEEGRLVEAAESYQKALRADPLYKPAAECLSIVLTDLGTSLKLSG 172
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ +G + Y AL D A YNLG+ + + +Y +L C+ K P E +
Sbjct: 173 NTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAALERPMYAEAYCNM 232
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 233 GVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 282
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G++ Q
Sbjct: 231 NMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGIAYY 290
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 291 KKALYYNWHYADAMYNLGVAYGEMLKFDNAIVFYELAFHFNPHCAEACNNLGVIYKDRDN 350
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ +I P+ + L + +Y + G ++ A+ + E ++
Sbjct: 351 LDKAVECYQTALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIM 397
>gi|388856119|emb|CCF50299.1| related to TPR-containing protein Mql1 [Ustilago hordei]
Length = 1287
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + ++ +D ++ ++ LG MA ++Y K E Y A+ D ++G+
Sbjct: 372 ERAIQFLTKSLESDPNDAQSWYLLGRAYMAGQNYNKAYEAYQQAVYRDGKNPTFWCSIGV 431
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+ +N+Y D+L+ + + + P + EV + + SLYE + Q SD
Sbjct: 432 LYYQINQYRDALDAYSRAIRLNPYISEVWFDLGSLYEACNN--QISD 476
Score = 43.9 bits (102), Expect = 0.15, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 46/89 (51%)
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
N AA+++LG+ A EDY + Y AL ++ + AL + H+ L+ + +++ F
Sbjct: 138 NEAAWLSLGSAAETMEDYDRALSAYEAALRHNPYSVPALSAIAGVHRTLDNFEKAVDYFQ 197
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA 287
++ IVP + + Y + D+++A
Sbjct: 198 RVLNIVPENGDTWGSMGHCYLMMDDLQRA 226
>gi|343426379|emb|CBQ69909.1| probable TPR-containing protein Mql1 [Sporisorium reilianum SRZ2]
Length = 1288
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + ++ +D ++ ++ LG MA ++Y K E Y A+ D ++G+
Sbjct: 379 ERAIQFLTKSLESDPNDAQSWYLLGRAYMAGQNYNKAYEAYQQAVYRDGKNPTFWCSIGV 438
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+ +N+Y D+L+ + + + P + EV + + SLYE + Q SD
Sbjct: 439 LYYQINQYRDALDAYSRAIRLNPYISEVWFDLGSLYEACNN--QISD 483
>gi|225873528|ref|YP_002754987.1| hypothetical protein ACP_1920 [Acidobacterium capsulatum ATCC
51196]
gi|225794548|gb|ACO34638.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G +++A + E ++ + +NLG R+DY + + LY A + D A ++
Sbjct: 149 GNIDEAVALYEAILAQAPGHAPSAINLGTIYYHRKDYARAERLYRGATEADPNYALAFFD 208
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LG L ++++E + +VP + Y +A YE G+ QA
Sbjct: 209 LGNVLDELQRMTEAIEAYQAAIRLVPRYADAHYNLALAYERQGERRQA 256
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ +A NL IY+ + + +AE++ A AD + AF +LGN + + E Y
Sbjct: 169 APSAINLGTIYYHRKDYARAERLYRGATEADPNYALAFFDLGNVLDELQRMTEAIEAYQA 228
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP 268
A+ +A YNL LA++ E +L + + P P
Sbjct: 229 AIRLVPRYADAHYNLALAYERQGERRQALRHWTAYIKLDPHGP 271
>gi|71022837|ref|XP_761648.1| hypothetical protein UM05501.1 [Ustilago maydis 521]
gi|14279385|gb|AAK58576.1|AF268097_1 TPR-containing protein Mql1 [Ustilago maydis]
gi|46101125|gb|EAK86358.1| hypothetical protein UM05501.1 [Ustilago maydis 521]
Length = 1292
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A + ++ +D ++ ++ LG MA ++Y K E Y A+ D ++G+
Sbjct: 380 ERAIQFLTKSLESDPNDAQSWYLLGRAYMAGQNYNKAYEAYQQAVYRDGKNPTFWCSIGV 439
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+ +N+Y D+L+ + + + P + EV + + SLYE + Q SD
Sbjct: 440 LYYQINQYRDALDAYSRAIRLNPYISEVWFDLGSLYEACNN--QISD 484
>gi|402581911|gb|EJW75858.1| hypothetical protein WUBG_13232, partial [Wuchereria bancrofti]
Length = 86
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 162 DEMTSSAATNLSFIYFLQG--EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
D++ +AA NL+ I LQG ++E+A + +E+A + D YN+ A VN GN D K
Sbjct: 8 DKVAGAAANNLAVINLLQGAPKLEEAVQYSEQALSIDRYNANALVNRGNIFFILGDLDKA 67
Query: 220 KELYVHALDNDATCIEAL 237
+ Y AL N+ + L
Sbjct: 68 AQYYKEALSNEVSMTNKL 85
>gi|428212763|ref|YP_007085907.1| Tfp pilus assembly protein PilF [Oscillatoria acuminata PCC 6304]
gi|428001144|gb|AFY81987.1| Tfp pilus assembly protein PilF [Oscillatoria acuminata PCC 6304]
Length = 302
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 3/152 (1%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEACTA 195
+N+ + ++ VS+A+ + ++ + A NL GE++ A +A A
Sbjct: 50 VNRGLGSIQAGQVSEAIAAFRQAAQLDPTLAVAHYNLGLALRQSGELQGAADSFYQATQA 109
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + AF NLG + + + ++ A+ D A YNLGL + + +
Sbjct: 110 DPSFTLAFANLGAALIEGNNLDRARDYLQRAIALDPQMGLAHYNLGLVLEQQQLWDAAAA 169
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
F + P+ PE Y + +Y G +E A
Sbjct: 170 SFQQAMQYSPTTPEPPYHLGLVYLEQGKLEAA 201
>gi|118361971|ref|XP_001014213.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89295980|gb|EAR93968.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 513
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 148 MNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFV 204
MN+ +A C ++ S+A NL I+F+ E ++AEK EA + D + A
Sbjct: 302 MNNFIEAQQFFIKCISVNKEYSTAYINLGLIHFMNNEYDEAEKYYLEAISIDENSFEALS 361
Query: 205 NLGNCAMAREDYVKGKELYVHALDNDATCIEA------LYNLGLAHKHLNEYSDSL 254
NLGN ++ Y + +ELY+ A D + L NLG ++ D+L
Sbjct: 362 NLGNLYFHKKLYTQAEELYIKAKQVDYQLYNSNQNAFLLLNLGRVQFETQKFDDAL 417
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 99 ILTSAKLIAPSIEDN--FSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVD 156
IL K ++ E+N SN N QSI+ + + A N A FL N+ SQA
Sbjct: 187 ILYLQKFLSNRQENNKYISNALNHLNQSIKLNPRNYEA---NFNIACAFLEQNNQSQAEV 243
Query: 157 VLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAR 213
L C D +A L+ I+ + E+A++ A ++ + NLG M
Sbjct: 244 YLNKCIKIDSRNPNAYRVLAGIFHESKKFEKAKEFYINAVKIRPIDTD-YYNLGLVCMIM 302
Query: 214 EDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQ 273
++++ ++ ++ + + A NLGL H NEY ++ + + + +I + E L
Sbjct: 303 NNFIEAQQFFIKCISVNKEYSTAYINLGLIHFMNNEYDEAEKYYLEAISIDENSFEALSN 362
Query: 274 IASLY 278
+ +LY
Sbjct: 363 LGNLY 367
>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
Length = 471
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAR---EDYVKGKELYVHALD 228
L F Y ++A + E+ D YN++ + N G + E+ V +L D
Sbjct: 182 LGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRD 241
Query: 229 NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ A+ A YN G L +Y ++ECFHK+ I P Y +AS+YE G+++QA
Sbjct: 242 DFAS---AWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQA 297
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G +QAE+ + D N AF +LG + Y + + A+ D +E Y
Sbjct: 122 GLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYE 181
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
LG ++ LN + +LE + K P Y + TG +E+A VN L +V
Sbjct: 182 LGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEA--VNCFDLATSV 239
Query: 300 RNDALSQLH 308
R+D S +
Sbjct: 240 RDDFASAWY 248
>gi|256772634|emb|CAX46402.1| putative SPINDLY protein [Rosa lucieae]
Length = 916
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A + ++A AD +Y AA +LG
Sbjct: 114 DSENACALTHCGILYKDEGRLREAAESYQKALNADPSYKPAAECLAIVLTDLGTSLKLAG 173
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ G + Y AL D A YNLG+ + + ++ +L C+ K P E +
Sbjct: 174 NTQDGLQKYYEALKTDPHYAPAYYNLGVVYSEMMQFDTALTCYEKAALERPMYTEAYCNM 233
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 234 GVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 283
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G+++Q
Sbjct: 232 NMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDIDQGIAYY 291
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 292 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN 351
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ +I P+ + L + +Y + G ++ A+ + E ++
Sbjct: 352 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAII 398
>gi|326202400|ref|ZP_08192269.1| Tetratricopeptide repeat [Clostridium papyrosolvens DSM 2782]
gi|325987518|gb|EGD48345.1| Tetratricopeptide repeat [Clostridium papyrosolvens DSM 2782]
Length = 233
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 157 VLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDY 216
LK D S +N + + GE+++A + EE + N+ + +LG + + D
Sbjct: 71 TLKIKDNDLYSLKSNYALALWKNGELDRAIALYEE-IFPNYKNTNVYGSLGYFYVLKGDL 129
Query: 217 VKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIAS 276
K + A++ ++T L N+G + L EY + E F KL A+ P PE Y A
Sbjct: 130 EKALKFNQEAMEYNSTGAVILDNMGQTYYLLGEYEKADEIFKKLIALSPKFPEAYYDYAL 189
Query: 277 LYEITGDVE 285
+ E GD E
Sbjct: 190 VLEKLGDKE 198
>gi|15229778|ref|NP_187761.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Arabidopsis
thaliana]
gi|75332921|sp|Q96301.1|SPY_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY
gi|12322895|gb|AAG51433.1|AC008153_6 spindly (gibberellin signal transduction protein); 75377-80082
[Arabidopsis thaliana]
gi|1589778|gb|AAC49446.1| SPINDLY [Arabidopsis thaliana]
gi|62319977|dbj|BAD94086.1| spindly [Arabidopsis thaliana]
gi|332641539|gb|AEE75060.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Arabidopsis
thaliana]
Length = 914
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
I K + N + A D D + A T+ ++ +G + +A + ++A A
Sbjct: 81 IGKGICLQTQNKGNLAFDCFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMA 140
Query: 196 D-TYNSAA------FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
D +Y AA +LG + +G + Y AL D A YNLG+ + +
Sbjct: 141 DASYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMM 200
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND- 302
+Y ++L C+ K P E + +Y+ GD+E A E L E +N+
Sbjct: 201 QYDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNM 260
Query: 303 --ALSQLHREMKHEAE 316
AL+ L ++K E +
Sbjct: 261 AIALTDLGTKVKLEGD 276
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G+V Q
Sbjct: 225 NMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDVTQGVAYY 284
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 285 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDN 344
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL------EAVRNDA 303
++EC+ +I P+ + L + +Y + G ++ A+ + E +L EA N
Sbjct: 345 LDKAVECYQMALSIKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNN-- 402
Query: 304 LSQLHRE 310
L L+R+
Sbjct: 403 LGVLYRD 409
>gi|225620139|ref|YP_002721396.1| hypothetical protein BHWA1_01212 [Brachyspira hyodysenteriae WA1]
gi|225214958|gb|ACN83692.1| hypothetical protein BHWA1_01212 [Brachyspira hyodysenteriae WA1]
Length = 1461
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMARE-DYVKGKELYVHALDND 230
L IY+ GE A K EA T + A NLGN RE DY K K+ Y A DN
Sbjct: 1210 LGQIYYNLGEYGNAVKNFNEALTINAVYPDANYNLGNVYFYREKDYAKAKQYYQTAYDNL 1269
Query: 231 ATCIEA---LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIAS 276
A + + LYNL + EY + E F+ L PS V Y + +
Sbjct: 1270 APNLRSDKLLYNLSWIYYSDGEYDRAFEGFNALFQKNPSNSVVSYALGN 1318
>gi|193216265|ref|YP_001997464.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193089742|gb|ACF15017.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 365
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGN-CAMAREDYVKGKELYVHALDN 229
NL Y+ G A+ +S A+ NLG C D + Y A D
Sbjct: 118 NLGLAYYQSGNFYSAKDAFAYVVELRAGDSDAYYNLGKACVRIGLD-KSAVDAYQKAADL 176
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
D I+A YNLGL++K L +Y ++ +K I + P + + + Y+ GD QA
Sbjct: 177 DPNFIDAYYNLGLSYKRLEQYDKAVAALNKAVQIGANDPAIFFSLGECYQGAGDNNQA 234
>gi|220933172|ref|YP_002510080.1| hypothetical protein Hore_23400 [Halothermothrix orenii H 168]
gi|219994482|gb|ACL71085.1| TPR repeat-containing protein [Halothermothrix orenii H 168]
Length = 183
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
V L + A V K E S A L+ I QG +E+ ++A D
Sbjct: 21 GVHKLERGEYQDAEKVFKDIIERQSDFVPAYNKLAIIKIYQGSLEEGGDWLKKALELDHE 80
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+ A NLG+ R D K K+LY AL+ D A NLG+ ++ +Y+ S++
Sbjct: 81 YAPAITNLGSIEKKRGDLEKAKQLYEKALNADPKYGPAYNNLGVIYREQGDYARSVKFLK 140
Query: 259 K 259
K
Sbjct: 141 K 141
>gi|346430246|emb|CCC55505.1| tetratricopeptide repeat protein (TRP_2) [uncultured archaeon]
Length = 219
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 109 SIEDNFSNG-YNWCVQSIRNSAHSSL--AQDLEINKAVTFLRMNDVSQAVDVLKSCDEMT 165
+I + + G Y V+S++ + S L Q L + +F + D +++ + E +
Sbjct: 3 TIRELYEKGDYEGVVKSLKRLSQSDLRDPQTLYM-VGRSFYEIGDYKRSLKFFQMYVETS 61
Query: 166 SSAATNLSFI---YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKEL 222
+I Y +++ AE+ E+ D N A ++LG R DY EL
Sbjct: 62 EDKKEGYLYIGRSYLRLKKLDDAERAFEQVMKIDERNEDAVLDLGVVKALRNDYQGAAEL 121
Query: 223 YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
+ + + +A +NLGL + +LN+ + + + + + P+ E LY + +
Sbjct: 122 FRKVTELNPRNKKAWFNLGLTYFNLNDLKGAEDSYRRALELDPNFVEALYNLTGV 176
>gi|169832335|ref|YP_001718317.1| hypothetical protein Daud_2198 [Candidatus Desulforudis audaxviator
MP104C]
gi|169639179|gb|ACA60685.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 209
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 151 VSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCA 210
+++ +LK +E ++AA NL Q +++A + E+A + A+VNLG
Sbjct: 12 IAEQKRILKE-NEDCATAAYNLGVAMMQQNRLDEAREHFEKAIETGSRMFEAYVNLGYIY 70
Query: 211 MAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEV 270
D K E+ A++ + NLG A+ + + +++E K + P + +
Sbjct: 71 FKEGDMEKVAEVNRKAVELEPRYARGYANLGFAYLQMAKTGEAIEALQKALELNPEIAQA 130
Query: 271 LYQIASLYEITGDVEQASDVNENLL 295
+A+ Y GDV++A +V E L+
Sbjct: 131 WNNLANAYLQRGDVDKAIEVGERLI 155
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N V ++ N + +A + + E S A NL +IYF +G++E+ ++ +A +
Sbjct: 31 NLGVAMMQQNRLDEAREHFEKAIETGSRMFEAYVNLGYIYFKEGDMEKVAEVNRKAVELE 90
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ + NLG + + E AL+ + +A NL A+ + ++E
Sbjct: 91 PRYARGYANLGFAYLQMAKTGEAIEALQKALELNPEIAQAWNNLANAYLQRGDVDKAIEV 150
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+L A+ P+ +A Y GD +A
Sbjct: 151 GERLIALAPNFGLGHNNLAVAYYHKGDFPKA 181
>gi|428309254|ref|YP_007120231.1| Flp pilus assembly protein TadD [Microcoleus sp. PCC 7113]
gi|428250866|gb|AFZ16825.1| Flp pilus assembly protein TadD [Microcoleus sp. PCC 7113]
Length = 325
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 65/160 (40%), Gaps = 3/160 (1%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEACTA 195
+NK + ++ + +A+ + ++ A NL G+++ + +A
Sbjct: 71 LNKGIGLIQQGKLPEAIAAFRQASQLNPQLAPAHYNLGLALRQSGQLQASADAFYQATQV 130
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + AF NLG + + + ++ AL+ + A YN GL + +++
Sbjct: 131 DPNFALAFANLGAALLEGNNLQQARDYLTRALELEPNLGVAHYNYGLLLSQAGDQEQAID 190
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
F + P+ PE Y I +Y G +E A + + L
Sbjct: 191 QFKNALQVSPNAPEPAYHIGLIYLQQGKIEDAKKLFQQAL 230
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSSA---ATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N + + D QA+D K+ +++ +A A ++ IY QG++E A+K+ ++A +
Sbjct: 174 NYGLLLSQAGDQEQAIDQFKNALQVSPNAPEPAYHIGLIYLQQGKIEDAKKLFQQALKIN 233
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ A NLG+ ++ + + A ++++ A Y GL N +SD+
Sbjct: 234 PKYAEAHYNLGSILFSQGNLDAALTAFRKAAESNSNYPNAYYGAGLVFLRQNRFSDAQ-- 291
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRN 301
+VL LY + G+ + A++ + LL+ RN
Sbjct: 292 ------------QVLQYAKMLYTVQGNSQWAANAEQ--LLQKARN 322
>gi|116749875|ref|YP_846562.1| hypothetical protein Sfum_2447 [Syntrophobacter fumaroxidans MPOB]
gi|116698939|gb|ABK18127.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
fumaroxidans MPOB]
Length = 318
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 17/227 (7%)
Query: 117 GYNWCVQSIRNSAHSSLAQDLEINKAVTFL---RMNDVSQAVDVLKSCDEMTSSAATNLS 173
GY Q+IR + AQ N AV + RM++ + L ++A NL+
Sbjct: 79 GYR---QAIRQNPGDPKAQ---FNLAVIYQDQGRMDEAGKIYRELVDRHPDYAAAWVNLA 132
Query: 174 FIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATC 233
I G+ E+AE++ A +SA G + R+ + E++ AL DA+C
Sbjct: 133 SIREQAGDHEEAERLFRRGVEATRDDSAPLSQYGFFLLRRDRPAEAAEVFREALKRDASC 192
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNE 292
A + LG + E +++L + + P+ E + A + G+ A + +
Sbjct: 193 ANACFGLGEIAEKSGERAEALRRYERAARYNPTDFEARLRAARIAASLGERPGAIAHMQA 252
Query: 293 NLLLEAVRNDA---LSQLHRE---MKHEAEKCILTSAKLIAPSIEDN 333
+ L+ R DA L QL RE MK +AE+ + +A+ AP E N
Sbjct: 253 AVALKPDRGDAFLFLGQLLREDGQMK-DAERAVEEAARHGAPVAECN 298
>gi|371778043|ref|ZP_09484365.1| hypothetical protein AnHS1_11562 [Anaerophaga sp. HS1]
Length = 774
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
NL+ Y+ Q ++ AE + A D S +NL + K ++L+ L ++
Sbjct: 593 NLANFYYNQNDLINAENYYKAAMKQDNQLSFIKLNLAYLYNRKGQNEKAEQLFKEYLQSE 652
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
EA Y+LGL + Y++SL+ K + + P+ P V + IA +Y+ D ++A
Sbjct: 653 PNDAEAYYSLGLLLTEMRRYNESLDALLKAKKLAPNRPRVNHNIAMMYDFMKDKQKA 709
>gi|91793618|ref|YP_563269.1| TPR repeat-containing protein [Shewanella denitrificans OS217]
gi|91715620|gb|ABE55546.1| TPR repeat [Shewanella denitrificans OS217]
Length = 622
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
+Y L GE E A K EA D Y S + +GN Y + +Y A+ A
Sbjct: 429 VYTLLGETEAALKFYNEAVEMDPYYSEYYNEIGNLLQRLGRYQQAIGMYESAIKYSAPYS 488
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
E N G+ H L ++ +LECF + P +V Y + GDV D
Sbjct: 489 EVYSNKGMCHVFLEQWPAALECFAHSLELSPHQQDV-------YLVRGDVFSGFD 536
>gi|225430656|ref|XP_002270163.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Vitis vinifera]
gi|296085167|emb|CBI28662.3| unnamed protein product [Vitis vinifera]
Length = 986
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 78 AVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC-VQSIRNSAHSSLAQD 136
A N A + + + +EA +C A I P + D SN N+ Q + A+S +
Sbjct: 166 AWSNLASAYMRKGRLNEAAQCC-RQALAINPLLVDAHSNLGNFMKAQGLIQEAYSCYIEA 224
Query: 137 LEI---------NKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEK 187
L I N A F+ D+++A+ K ++ + A Y G V +A
Sbjct: 225 LRIQPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKPTFAD----AYLNLGNVYKALG 280
Query: 188 MAEEA--CTADTYNSAAFVNLGNCAMAREDYVKGKE-----LYVHALDNDATCIEALYNL 240
M +EA C + + MA Y +G+ Y A++ D+ +EA NL
Sbjct: 281 MPQEAIVCYQRALQTRPEYAMAYGNMAGTYYEQGQMDMAIVHYKQAIECDSGFLEAYNNL 340
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
G A K + ++++C+H+ A+ P+ P+ L + ++Y
Sbjct: 341 GNALKDVGRIDEAIQCYHQCLALQPNHPQALTNLGNIY 378
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A TNL IY V A + T SA F NL + +Y Y L
Sbjct: 370 ALTNLGNIYMEWNMVAAAATYYKATLAVTTGLSAPFSNLAIIYKQQGNYADAISCYNEVL 429
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
D + L N G K + S++++ + I P+M E +AS Y+ +G VE A
Sbjct: 430 RIDPLAADGLVNRGNTFKEIGRVSEAIQDYIHAITIRPTMAEAHANLASAYKDSGHVEAA 489
>gi|307719874|ref|YP_003875406.1| hypothetical protein STHERM_c22050 [Spirochaeta thermophila DSM
6192]
gi|306533599|gb|ADN03133.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 839
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D SA NL+ +Y +G +++A + E+ TAD + NLG Y + +
Sbjct: 143 DPHLVSAYNNLATLYQQRGAIDKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYEEARA 202
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
+ AL +EAL NLG+ + + +L CF + + P + S+ +
Sbjct: 203 SFHRALQKRPGWVEALNNLGIVEQSRGHHEAALACFREALTLDPLHAAAANNMGSILALL 262
Query: 282 GDVEQASD 289
G ++A D
Sbjct: 263 GRYKEAFD 270
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G++E A K+ E +S + G A+ ++ + KE + AL+ EAL N
Sbjct: 25 GDIETASKLVHELLHEVPLSSGVHLLSGMIALRQDRNEEAKEAFTKALELGGEEAEALNN 84
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LG+ ++ ++ ++E F K A P P++LY +A+ + G E+A
Sbjct: 85 LGVIYRKEGDHRKAIEYFRKALAADPDRPDILYNLANACKDAGLFEEA 132
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 20/200 (10%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ A NL IY +G+ +A + +A AD NL N + + + Y
Sbjct: 79 AEALNNLGVIYRKEGDHRKAIEYFRKALAADPDRPDILYNLANACKDAGLFEEAEAAYRK 138
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
AL++D + A NL ++ ++ K P P +LY + LY+ G E
Sbjct: 139 ALEHDPHLVSAYNNLATLYQQRGAIDKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYE 198
Query: 286 QASDVNENLL------LEAVRNDALSQLHREMKHEAEKCILTSAKLIAP----------- 328
+A L +EA+ N + + R HEA A + P
Sbjct: 199 EARASFHRALQKRPGWVEALNNLGIVEQSR-GHHEAALACFREALTLDPLHAAAANNMGS 257
Query: 329 --SIEDNFSNGYNWCVQSIR 346
++ + ++W VQ++R
Sbjct: 258 ILALLGRYKEAFDWFVQALR 277
>gi|66825447|ref|XP_646078.1| hypothetical protein DDB_G0269194 [Dictyostelium discoideum AX4]
gi|74960859|sp|O77033.1|CYC8_DICDI RecName: Full=General transcriptional corepressor trfA
gi|3599670|dbj|BAA33143.1| TRFA [Dictyostelium discoideum]
gi|60474010|gb|EAL71947.1| hypothetical protein DDB_G0269194 [Dictyostelium discoideum AX4]
Length = 1390
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%)
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYS 251
+ +D+ ++ + LG C M ++ Y K + Y A+ D ++G+ + +N+Y
Sbjct: 412 SIDSDSSDAQTWYLLGRCYMTQQKYKKAYDAYQQAVYRDGRNPTFWCSIGVLYYQINQYR 471
Query: 252 DSLECFHKLQAIVPSMPEVLYQIASLYE 279
D+L+ + + + P + EV Y + +LYE
Sbjct: 472 DALDAYTRAIRLNPFLSEVWYDLGTLYE 499
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP----EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH +Y SLE F L P +P ++ +QI +YE+ + ++
Sbjct: 311 STEIYFRLGVLYKHQGKYDQSLEYFQHL-VKNPPLPLTTSDIWFQIGHVYELQKEYHKSK 369
Query: 289 DVNENLLLE-AVRNDALSQL 307
D E +L + A + L QL
Sbjct: 370 DAYEKVLKDNATHSKVLQQL 389
>gi|145352766|ref|XP_001420708.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580943|gb|ABO99001.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 708
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQG-EVEQAEKMA------ 189
N V F N + A+D + C ++ NLS + QG E+++ +A
Sbjct: 76 NIGVVFKMTNRIDDALDACEKCLRISPDFDLGKKNLSLVLTDQGTELKKKNLLADAIATY 135
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E A + DT N A+ NLG E+Y + Y +A C E N G+ +K
Sbjct: 136 ERALSYDTTNVEAYYNLGVACAEAEEYDRAIIAYENAGRLRPQCAEIWNNAGVLYKERGN 195
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ +++ + + A P+ + L + L+ +TG+ +QA
Sbjct: 196 DARAMDYYRRAVACNPNFAQPLNNLGVLHTMTGEAQQA 233
>gi|145219355|ref|YP_001130064.1| hypothetical protein Cvib_0540 [Chlorobium phaeovibrioides DSM 265]
gi|145205519|gb|ABP36562.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeovibrioides
DSM 265]
Length = 465
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 15/195 (7%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAE----- 190
++ +N A+ + + +A L+ D + S ++ F Y+ +++ E+ AE
Sbjct: 103 EMTLNLALAWFNTGQLDRA---LEEIDGILSDSSIEKEFHYYRGIILQRLERFAEAEADF 159
Query: 191 -EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
D + A+ L C + + + + Y ALD + I A YN GL +
Sbjct: 160 ERTLELDADFAEAWYELAYCKDLLDKFDESVQCYRRALDEEPYNINAWYNNGLVLSKMKR 219
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL------LEAVRNDA 303
Y ++LEC+ AI Y A++ ITG + +A++ L L A+ N
Sbjct: 220 YDEALECYDMALAIADDFTSAWYNRANVLAITGRIAEAAESYRETLKHEPDDLNALYNLG 279
Query: 304 LSQLHREMKHEAEKC 318
++ E+ EA C
Sbjct: 280 IACEELELYREAIDC 294
>gi|345023319|ref|ZP_08786932.1| hypothetical protein OTW25_18753 [Ornithinibacillus scapharcae
TW25]
Length = 218
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACT 194
+I AV ++ N +A ++ E + N + G+ E A ++A +
Sbjct: 3 KIANAVELMKENKYEEAANLFNEYIEENPNDPIGFVNFGNLLLHLGDAEHAINFFQKAIS 62
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D+ + A+ LGN +EDY K ++ ++ A+ N + + LG++H++ ++ +L
Sbjct: 63 LDSKTATAYYGLGNVYYEQEDYPKAQQNFLEAIKNGLEEADVFFMLGMSHQNQQQFKLAL 122
Query: 255 ECFHKLQAIVPSMPEVLYQIA 275
+ + ++P +V++Q
Sbjct: 123 PYLLRAKELMPEDEDVVFQYG 143
>gi|329961716|ref|ZP_08299747.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328531457|gb|EGF58297.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 481
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 153 QAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMA 212
+A ++LK ++ T+++ +Y G++ +AE E+A AD V G+ A+A
Sbjct: 52 EAGELLKGKNKKNVELVTSIARVYLDAGKLTEAEAYLEKARKADHKAPEVSVLEGDIALA 111
Query: 213 REDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY 272
R+D K +LY A+ D C EA A+K + + ++E +L+AI P E
Sbjct: 112 RKDVGKACQLYEQAIYFDPDCKEAYLKYAQAYKSASP-AQAIEKLQQLKAIAPDYLEADK 170
Query: 273 QIASLY 278
+A +Y
Sbjct: 171 VLAEVY 176
>gi|118402009|ref|XP_001033324.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287672|gb|EAR85661.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 427
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
F+Q + ++ E+ + D N AA + G+ +E++ K E+Y L+ND I A
Sbjct: 136 FIQKDYDKTEQYINQLLDIDPSNKAAKIIQGDIFYMKEEFEKALEMYFQVLENDKNAISA 195
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
Y +G+ + L ++++++ F A+ + IA + + S N NL L
Sbjct: 196 CYKIGMTNWKLEKFTEAISNFELCLALDKYFIDSYAAIAMILHRHLEKYDESLFNLNLYL 255
Query: 297 EAVRNDALS--QLHREM 311
+ + D L Q++ EM
Sbjct: 256 QYNKKDPLKNVQIYMEM 272
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 182 VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
+++ EK+A T ++ LG C M DY K K+ +++ L + +E NLG
Sbjct: 32 IQECEKLANIYVTK---KEIVYLYLGKCYMNLGDYEKSKQSFIYCLSINQLNLECYINLG 88
Query: 242 LAHKHLNEYSDSLECFHKLQAIV 264
+ LNEY + + F K + ++
Sbjct: 89 TIYAQLNEYELAFDYFDKYEQLI 111
>gi|383790647|ref|YP_005475221.1| putative N-acetylglucosaminyl transferase [Spirochaeta africana DSM
8902]
gi|383107181|gb|AFG37514.1| putative N-acetylglucosaminyl transferase [Spirochaeta africana DSM
8902]
Length = 672
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 142 AVTFLRMN--DVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAE-------KMAEEA 192
A ++ R N +V +++++ +E +L Y+++G +A + EEA
Sbjct: 254 AESYYRQNPDEVPDREEIMRNTNEAIRRN-PDLWLPYYIRGMTHKATNNQSRALQDLEEA 312
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+ N+ +LGN ++ K Y ++ D T A +NLGL H+ L +
Sbjct: 313 RALNPDNAELLYHLGNIQYDMREFRDAKNSYERSVHLDGTNERAFFNLGLTHQQLRDPRS 372
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+L+ F + A+ M + + +L GD A D
Sbjct: 373 ALDAFRRAIAVDSGMTNAYFALGNLQRAMGDYTDAID 409
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Query: 140 NKAVTFLRMNDVSQAVD-VLKSCDEMTSSAATNLSFIYFLQ--GEVEQAEKMAEEACTAD 196
N A+ +L+ +D A++ ++ ++A N +F L GE + A + + D
Sbjct: 461 NLAIAYLQQDDYDGALEPAAQAIRIQRNNAQYNFTFGQILSRLGEYDTAIQYLNRSAELD 520
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
T + LG +AREDY ++ + A D + E +NLG ++ N + S+E
Sbjct: 521 TSYLRPRIELGRVFIAREDYDAALDILLAAKRIDESSFEVNFNLGDVYRLKNLHRQSIEH 580
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ P+ +A Y + + E+A D+
Sbjct: 581 YELALRQNPNSARARNNLARTYIASQEYERAEDI 614
>gi|326438090|gb|EGD83660.1| hypothetical protein PTSG_12145 [Salpingoeca sp. ATCC 50818]
Length = 825
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 45/223 (20%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQA------------ 185
+ ++A+ F D++ V+ L T+ NL Y +GE ++A
Sbjct: 417 DYDRAIAFYE-KDLAITVETLGEKHPSTARTYNNLGEAYRHKGEYDRAIAFYEKDLAVTV 475
Query: 186 EKMAEE-ACTADTYN--SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY-NLG 241
E + E+ TA+TYN A+ N G A Y K + V AL + Y NLG
Sbjct: 476 ETLGEKHPSTANTYNNLGNAYDNKGEYDRAIAFYEKALAIRVEALGEKHPSTASTYGNLG 535
Query: 242 LAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQIASLYEITGDVEQASDVNEN 293
+A+K+ E+ ++E + K AI PS + + I L++ GD EQA +
Sbjct: 536 IAYKNKGEFDKAIELYQKDLAIKAETLGEKHPSTAQTYFNIGLLHDKRGDKEQACAYMQQ 595
Query: 294 LL--------------------LEAVRNDALSQLHREMKHEAE 316
L L +R A+++ H +H +E
Sbjct: 596 ALNVFTATLGPDHPNTRKAERNLRRIRGGAVTRQHTSTQHVSE 638
>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A+ N+G A E+Y K +E + L + ++ALYN G++ L +LE K+
Sbjct: 551 AWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVV 610
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENL 294
++ P P++ Y + G++E+A + E L
Sbjct: 611 SLSPDYPDLAYSLGVALMELGELEKALETFEKL 643
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 23/238 (9%)
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQG----EVEQAEKMA---EEAC 193
K F + +A++ +S E + I+++ G E+E+AE E+A
Sbjct: 79 KGTCFAALGRFEEALEAYESALESSPDTPE----IWYMMGLAFAEMERAEASILCFEKAL 134
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+AA +G A E Y + E + AL+ EA Y GL + +Y ++
Sbjct: 135 ELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENA 194
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA--------LS 305
LECF L P L Q + G E+A E+ L + N+A LS
Sbjct: 195 LECFDFLIREKPKDTAALEQKCLILANLGKNEEALGALEDFLKKFPANEAALYHKGILLS 254
Query: 306 QLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIR-NSAHSSLAQDLEINKA 362
+L R +AE+ I KL E F G+ VQ +R N A + + + ++ A
Sbjct: 255 ELSR--YEDAERTISKVLKLNPGHREAWFRKGFA-LVQLLRLNEAIEAFDEAIRLDPA 309
>gi|256828531|ref|YP_003157259.1| hypothetical protein Dbac_0720 [Desulfomicrobium baculatum DSM
4028]
gi|256577707|gb|ACU88843.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium baculatum
DSM 4028]
Length = 186
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%)
Query: 161 CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
D + + +L Y GE++ A K E A D +NLGN A+ D+ +
Sbjct: 27 SDPLDAREHNDLGASYETSGELDLALKAYETAAAKDRSWDQPLINLGNVHSAQADWTQAA 86
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
Y AL + EA+ NL A +L+E ++LE K P P +A
Sbjct: 87 ASYRQALKRNPENSEAMNNLAYALVNLDEPREALEWSSKAVQAEPGNPLFRATLAQALAG 146
Query: 281 TGDVEQA 287
TG+ E+A
Sbjct: 147 TGEREKA 153
>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1417
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 8/206 (3%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D + A NL +Y L+ +QA + E A D A+ LGN + ++
Sbjct: 447 DPLYVKAHYNLGIVYELKKMHDQAIESYERAIEIDPKYINAYNKLGNIYLDKKILYSALN 506
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
Y AL+ D + A N+GL + + ++LE ++K I P + Y +YE+
Sbjct: 507 YYKKALEIDPNYVNAYNNIGLVYYDKKMFDEALESYNKAIEINPKYNQAYYNSGLVYELK 566
Query: 282 GDVEQASDVNENLL-LEAVRNDALSQL-----HREMKHEAEKCILTSAKLIAPSIEDNFS 335
E A + E + L AL +L + +C ++ S+ DN+
Sbjct: 567 NQKETAIEKYEKAIELSPKYISALIRLADIYADSQQYQRGIECFKRILEITPDSVYDNYR 626
Query: 336 NGY-NWCVQSIRNSAHSSLAQDLEIN 360
GY +C+++ + A + LEIN
Sbjct: 627 LGYIYYCLKNF-DEAMYYYKKALEIN 651
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
+A+ GN + R+ K E Y AL+ D T + A N+GL + + D+LE + K
Sbjct: 826 SAYNRAGNIYLDRQMNEKALEFYKKALEIDPTYVNAYNNIGLIFYNQRKLDDALEYYDKA 885
Query: 261 QAIVPSMPEVLYQIASLYEITGDVE-------QASDVNENLLLEAVRNDALSQLHREMKH 313
I P+ + Y +YE+ E +A ++N N +R + + L +K
Sbjct: 886 LQINPNYFQAQYNSGLVYELKFQNELAILCYTRALEINPNYTNAQIRLENIL-LKDGIKQ 944
Query: 314 EAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEIN 360
E + + A+ + ED + GY + + A S L + +EIN
Sbjct: 945 EELEVLKKKAEENTNNPEDYYKLGYVYYTNFNMDEAISCLNKAIEIN 991
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 98 CILTSAKLIAPSIEDNFSNGY-NWCVQSIRNSAHSSLAQDLEINK---------AVTFLR 147
C ++ S+ DN+ GY +C+++ + A + LEIN + +
Sbjct: 609 CFKRILEITPDSVYDNYRLGYIYYCLKNF-DEAMYYYKKALEINPNYINAINNVGLVYYN 667
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNS------- 200
+ +A+ C E N ++ G + +A+KM +EA D Y
Sbjct: 668 QKNYEEAL----KCYEKAIEIDKNYFQAHYNSGILYEAKKMIDEAL--DCYKKVMEINPN 721
Query: 201 --AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+A + GN + + E + L+ D I+A+ NLG+ ++ + ++++C+
Sbjct: 722 YFSALIRSGNIYLDKYMTDNALECFKKILEIDPNYIDAINNLGIVYEDKQMFDEAIDCYI 781
Query: 259 KLQAIVPSMPEVLYQIASLYE 279
K I P+ + Y + LYE
Sbjct: 782 KAIQINPNYVKAHYNLGVLYE 802
>gi|349603776|gb|AEP99518.1| Transmembrane and TPR repeat-containing protein 3-like protein,
partial [Equus caballus]
Length = 478
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 105 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 164
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 165 NLAIVHIELKEPTEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 221
>gi|390469024|ref|XP_003734037.1| PREDICTED: tetratricopeptide repeat protein 6-like [Callithrix
jacchus]
Length = 617
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 14/232 (6%)
Query: 90 EMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA--HSSLAQDLEI-------N 140
E +A+K L + + I+ S GYN +Q A H ++A D+E
Sbjct: 358 EATKKAQKDFLKALHINPGYIKARISLGYNLQIQGKFQKAWNHFTIAMDIEPKNYLAYEG 417
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTSSA--ATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+AV L+M + A+ + + ++ ++A TN I+ G + A K +EA + +
Sbjct: 418 RAVVCLQMGNNFAAMQDINAAMKINTTAEFLTNRGVIHEFMGHKQNAMKDYQEAISLNPK 477
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
S A+ N GN + + + + AL D L N +A+ L +Y ++ E F
Sbjct: 478 YSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYVLMNRAIANTILKKYEEAKEDFA 537
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLLEAVRNDALSQLHR 309
+ P V + A Y E A D+++ L L+ NDAL+ R
Sbjct: 538 NVIERCPFWAAVYFNRAHFYYCLKQYELAEEDLSKALSLKP--NDALAYNFR 587
>gi|346430447|emb|CCC55711.1| tetratricopeptide repeat protein (TRP_2) [uncultured archaeon]
Length = 219
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 109 SIEDNFSNG-YNWCVQSIRNSAHSSL--AQDLEINKAVTFLRMNDVSQAVDVLKSCDEMT 165
+I + + G Y V+S++ + S L Q L + +F + D +++ + E +
Sbjct: 3 TIRELYEKGDYEGVVKSLKRLSQSDLRDPQTLYM-VGRSFYEIGDYKRSLKFFQMYVETS 61
Query: 166 SSAATNLSFI---YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKEL 222
+I Y +++ AE+ E+ D N A ++LG R DY EL
Sbjct: 62 EDKKEGYLYIGRSYLRLKKLDDAERAFEQVMKIDESNEDAVLDLGVVKALRNDYQGAAEL 121
Query: 223 YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
+ + + +A +NLGL + +LN+ + + + + + P+ E LY + +
Sbjct: 122 FRKVTELNPRNKKAWFNLGLTYFNLNDLKGAEDSYRRALELDPNFVEALYNLTGV 176
>gi|220907053|ref|YP_002482364.1| hypothetical protein Cyan7425_1633 [Cyanothece sp. PCC 7425]
gi|219863664|gb|ACL44003.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 358
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEM---TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
V LR +QA+ LK + + + S NL+ +F QG V + E A +
Sbjct: 179 GVILLRQGQTAQAIASLKKAELLAPRSGSVQLNLALAWFSQGNVVEGTAALERAIALEPR 238
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
N + +G+ +++ D Y A++ +EA + LG +Y+ ++ +
Sbjct: 239 NPKINLKMGDWRLSQNDLQGALGAYRRAVNAQPNLLEAQFGLGDVLMATGDYTQAIITYR 298
Query: 259 KLQAIVPSMPEVLYQIA 275
++ + P + Y++
Sbjct: 299 EITRLAPQNAQGFYKLG 315
>gi|19113401|ref|NP_596609.1| transcriptional corepressor Ssn6 [Schizosaccharomyces pombe 972h-]
gi|31340484|sp|O60184.1|CYC8_SCHPO RecName: Full=General transcriptional corepressor ssn6
gi|3116127|emb|CAA18877.1| transcriptional corepressor Ssn6 [Schizosaccharomyces pombe]
Length = 1102
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ ++ +G C +A++ Y K E Y A+ D ++G+ + +N+Y D+L
Sbjct: 579 ADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDAL 638
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 639 DAYSRAIRLNPYISEVWYDLGTLYE 663
>gi|328720812|ref|XP_001944528.2| PREDICTED: lysine-specific demethylase 6A-like isoform 1
[Acyrthosiphon pisum]
Length = 1224
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATC-----IEALY 238
Q EK +E+ A + +S + LG+ + E+Y K Y H NDA LY
Sbjct: 57 QKEKAEDESSKAISIDSKTYCKLGHFHLLLENYSKAMSAY-HKYYNDAKTNHWKDANFLY 115
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMP---EVLYQIASLYEITGDVEQA 287
LGL + H N Y S++ F KL I P+ EV ++ +Y++ + E A
Sbjct: 116 GLGLVYFHFNSYQWSIQFFQKLLYIDPNYQRANEVHLRLGLMYKVFNEWETA 167
>gi|304315336|ref|YP_003850483.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588795|gb|ADL59170.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 207
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
A+ + + +A++V + T N+ F + E ++A K ++A + +
Sbjct: 28 ALGLIEKEEYEKAINVYRLLISKTEKDLFNIGFCFTQNKEYQKALKYYDKALKINPEYAE 87
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A+ N G + Y K + Y AL+ + IEA N G + L +Y ++LEC++K
Sbjct: 88 AWNNKGIILKELKKYKKALKCYNKALEINPELIEAWNNKGTTLQELGKYEEALECYNKAL 147
Query: 262 AIVPSMPEVL-YQIASLYEITGDVEQASDVNENLLLEAVRNDALSQ----LHREMKHE 314
I P E L Y+ +L +I G ++A + L +N L + LH+++K++
Sbjct: 148 EINPKSIETLTYKGITLSKI-GKYKKALKCFDKALKINPKNKLLHKTKAALHKKLKNQ 204
>gi|160890019|ref|ZP_02071022.1| hypothetical protein BACUNI_02454 [Bacteroides uniformis ATCC 8492]
gi|156860407|gb|EDO53838.1| tetratricopeptide repeat protein [Bacteroides uniformis ATCC 8492]
Length = 481
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 139 INKAVTFLRMNDVSQAVD----VLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
++K + ++ N QA D +LK ++ T+++ Y G++++AE E A
Sbjct: 35 VDKVKSLIKTN-PEQASDAAGELLKGKNKKNVELVTSVARAYLDAGQLKEAETYLEMARK 93
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD A V G+ A AR+D K +LY A+ D+ +A A+K + S ++
Sbjct: 94 ADNKAPAVSVLEGDIAFARKDIGKACQLYEQAIYFDSNYKDAYLKYAQAYKSASP-SQAI 152
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
E ++L+AI P E ++A +Y T +A+D
Sbjct: 153 EKLNQLKAIAPDCLEADKELAEVYYATNRFGKAADT 188
>gi|145478081|ref|XP_001425063.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392131|emb|CAK57665.1| unnamed protein product [Paramecium tetraurelia]
Length = 1339
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 37/185 (20%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N+A + SQA+D+LK D+ + A NL +Y+ Q ++E ++ EA
Sbjct: 1102 NQATLLIETEKYSQALDLLKQALKTDQNNAEAHNNLGVLYYKQNKLELSQNEYMEAIKLK 1161
Query: 197 TYNSAAFVNLGNCAMAREDY----------VKGKELYVHALDNDATCI------------ 234
+N A N G A++DY +K K +V A N T +
Sbjct: 1162 VHNPEAHSNQGVIFCAKQDYSQALQCFDEAIKLKSDFVKAYHNKGTTLYEKENFKEAVEI 1221
Query: 235 ------------EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
E YN +A + L ++ D+L + + P M + + +L G
Sbjct: 1222 YDRAIKAKTQDPETYYNKSIALQGLEQFDDALNALEQAYKLAPEMALLYVEKGTLMYRKG 1281
Query: 283 DVEQA 287
V++A
Sbjct: 1282 KVDEA 1286
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI 263
+ LGN ++++ + Y +++ + +E YNLGL + + ++ +++ F + +
Sbjct: 9 IKLGNEFFQKKEFDQAINWYQQSINKNTQFVEGYYNLGLVYMYRKKFEEAINYFKQSLDL 68
Query: 264 VPSMPEVL 271
PS PE L
Sbjct: 69 RPSFPEAL 76
>gi|62319217|dbj|BAD94413.1| spindly [Arabidopsis thaliana]
gi|62319734|dbj|BAD95289.1| spindly [Arabidopsis thaliana]
Length = 535
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
I K + N + A D D + A T+ ++ +G + +A + ++A A
Sbjct: 81 IGKGICLQTQNKGNLAFDCFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMA 140
Query: 196 D-TYNSAA------FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
D +Y AA +LG + +G + Y AL D A YNLG+ + +
Sbjct: 141 DASYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMM 200
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND- 302
+Y ++L C+ K P E + +Y+ GD+E A E L E +N+
Sbjct: 201 QYDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNM 260
Query: 303 --ALSQLHREMKHEAE 316
AL+ L ++K E +
Sbjct: 261 AIALTDLGTKVKLEGD 276
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G+V Q
Sbjct: 225 NMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDVTQGVAYY 284
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 285 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDN 344
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL------EAVRNDA 303
++EC+ +I P+ + L + +Y + G ++ A+ + E +L EA N
Sbjct: 345 LDKAVECYQMALSIKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNN-- 402
Query: 304 LSQLHRE 310
L L+R+
Sbjct: 403 LGVLYRD 409
>gi|113478135|ref|YP_724196.1| sulfotransferase [Trichodesmium erythraeum IMS101]
gi|110169183|gb|ABG53723.1| sulfotransferase [Trichodesmium erythraeum IMS101]
Length = 887
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
IY QG++E A +A + LGN + K KE Y+ A+
Sbjct: 16 IYLAQGKLEAAITACYQALEIEQNFPLTCKILGNILQRMGEIDKAKEWYIKAISQQPNLA 75
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENL 294
EA NLG + ++ ++EC+ + I P++P + +++ VE A D E
Sbjct: 76 EAHANLGSIYAQQKQWHLAIECYREAIGIKPNIPGFYRNLGKIWQELDKVELARDCQEQA 135
Query: 295 L-LEAVRNDALSQLHREMK----HEAEKCILTSAKLI--APSIEDNFSN 336
L LEA A L + K E E+ I K I PS+ D + N
Sbjct: 136 LSLEAHYPQASKYLKQGKKLLENGEREEAIAYFQKAINFNPSLVDAYQN 184
>gi|298527930|ref|ZP_07015334.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511582|gb|EFI35484.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 186
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D +T+ +L Y L GE+E A K E A D +N GN E++ + +E
Sbjct: 30 DPLTAGEHNDLGVSYELMGEMELALKQYELAYENDREWDQPLINHGNVHAGLENWERAEE 89
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
Y AL+ EA+ NL ++ D+L+ K I P P L A T
Sbjct: 90 SYRKALERSPDNPEAMNNLAYVLMKQDKNDDALDWSAKAVKIQPENPAFLNTHARACLKT 149
Query: 282 GDVEQASDVNENLLLEAVRNDALSQLHREMKHEAE 316
G+ ++A + L + D L + +E E E
Sbjct: 150 GNPDKAKRIFTRALSQLPDEDPLRERVKEGLKEVE 184
>gi|451980918|ref|ZP_21929300.1| hypothetical protein NITGR_310031 [Nitrospina gracilis 3/211]
gi|451761840|emb|CCQ90543.1| hypothetical protein NITGR_310031 [Nitrospina gracilis 3/211]
Length = 268
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 159 KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVK 218
K D + N + IY G+ ++A +A D+ A+ NLG D +
Sbjct: 105 KRLDPTNARIHNNRALIYKEMGKPQEAIGELLQAVRLDSNYGKAYNNLGLIYYKMGDGIN 164
Query: 219 GKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
+ A + D +E++ NL + +K Y + + K+ + P PE Y +A LY
Sbjct: 165 AVRYFEKATELDPANVESINNLAILYKQQRHYRRAELLYRKVINLEPRHPEGYYNLALLY 224
Query: 279 EITGDVEQA 287
E TG ++ A
Sbjct: 225 EETGRLKDA 233
>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase [Cyanothece sp. PCC 7424]
gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
PCC 7424]
Length = 730
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+A K E+A + S A+ GN M E Y + E Y A+ +A Y+ G+
Sbjct: 514 EEAIKSYEKAVKINPSFSQAWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGI 573
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA 275
A LN Y ++L+ F + I P+ E YQ A
Sbjct: 574 ALNRLNRYREALKAFEEGTQIQPNSFEAWYQKA 606
>gi|427730333|ref|YP_007076570.1| hypothetical protein Nos7524_3170 [Nostoc sp. PCC 7524]
gi|427366252|gb|AFY48973.1| TPR repeat-containing protein [Nostoc sp. PCC 7524]
Length = 308
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 121 CVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQG 180
QS +A S L Q L+ A+ R+ D A D ++A NL G
Sbjct: 41 LAQSSVPTATSFLNQGLQ---AIQAGRVPDAIAAFQSATQLDPNLAAAHYNLGLALRQTG 97
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
+++ A A AD + AF NLG + ++ + E AL+ + A YNL
Sbjct: 98 QLQPAANAFYRATQADPNFALAFANLGGALLEGNNFQQASEYLQRALELNPQLGFAHYNL 157
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPS--MPEVLYQIASLYEITGDVEQA 287
GL + + ++ F QA++ S PE Y + Y G ++QA
Sbjct: 158 GLVRQQQQNWEAAIAAFK--QAVIYSNNAPEPHYHLGLCYLQQGKIKQA 204
>gi|299830347|ref|YP_003734562.1| photosystem I assembly protein Ycf3 [Kryptoperidinium foliaceum]
gi|297385049|gb|ADI40347.1| photosystem I assembly protein Ycf3 [Kryptoperidinium foliaceum]
Length = 168
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 25/139 (17%)
Query: 218 KGKELYVHALDN--DATCIE--------ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+GK Y AL N +A +E LYN+GL + + +Y+ +LE +H+ A+ ++
Sbjct: 40 QGKGRYAEALQNYYEALQVEEDPYDRSYTLYNIGLIYGNTGKYTQALEFYHQALALNSNL 99
Query: 268 PEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIA 327
P+ L IA +Y ++ L + + D ++L +E+ +A + + + KL A
Sbjct: 100 PQALNNIAVIYH-----------SQALRAQTLEEDEYTELSKELFDKAGEYWIQALKL-A 147
Query: 328 PSIEDNFSNGYNWCVQSIR 346
P DN+ NW + R
Sbjct: 148 P---DNYPGARNWLKVTGR 163
>gi|406980754|gb|EKE02316.1| hypothetical protein ACD_20C00399G0001 [uncultured bacterium]
Length = 614
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 120/291 (41%), Gaps = 32/291 (10%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQ------GEVEQAEKMA 189
DL + +T + + +AV L + A L Y+L GE ++A +
Sbjct: 272 DLYLAWGITLQKYGEHFEAVSKLSKAISLQEKKAATL---YYLAISLAEIGEHQRAITLL 328
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
EE T D S AFV LG+ +D+ K E Y +A++ A Y + + + L +
Sbjct: 329 EEVLTIDPRYSDAFVKLGSIYNILKDHHKAIECYKNAVNTSIKNSHANYLIAVTYNSLGD 388
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHR 309
Y+++++ ++K P + +A + TGD++ EAVRN +
Sbjct: 389 YANAIKYYNKTIETNPENIDAYVNLAVILSETGDIK-----------EAVRN-----MRI 432
Query: 310 EMKHEAEKC-ILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRM 368
+ E C I T +I E + + +I+ + +S A + K +R+
Sbjct: 433 AFRKEPNSCKINTIYGVILSKDESTYKDALEKFDNAIKIDSDASTAY---VGKGEILIRL 489
Query: 369 NDVSQAVDVLKSCDEMTSSAATNLSFIYFLVSSEFQYLPTSEVPIYLENLL 419
++A+ + +E+ N+S ++ L + ++ +S Y N L
Sbjct: 490 MRFNEAIS---TYNEILVKNPNNISAMFMLGVTYIEFADSSNNQAYYHNAL 537
>gi|290992594|ref|XP_002678919.1| TPR repeat domain-containing protein [Naegleria gruberi]
gi|284092533|gb|EFC46175.1| TPR repeat domain-containing protein [Naegleria gruberi]
Length = 790
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 172 LSFIYFLQGE---VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD 228
L ++Y E +E A +++ AD + + LG C MA++ Y Y A+
Sbjct: 248 LGWLYHQNTEFQNLETAITYLQQSIDADPSSGQTWYLLGRCFMAQKRYRYAYNAYQQAVF 307
Query: 229 NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
D ++G+ + +N+Y D+L+ + + + P + EV Y + +LYE + A
Sbjct: 308 RDGKNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPFLSEVWYDLGTLYESCSQIPDAL 367
Query: 289 DV 290
D
Sbjct: 368 DA 369
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM---PEVLYQIASLYEITGDVEQASDVN 291
E + LG+ +K +Y SLECF ++ P ++ +QI +YE+ D ++A +
Sbjct: 172 EIYFRLGIIYKQQKKYEQSLECFGIIRKNPPPPLTEADIWFQIGHVYELKKDFQEAKNSY 231
Query: 292 ENLL-LEAVRNDALSQLHREMKHEAE-KCILTSAKLIAPSIEDNFSNGYNWCV 342
E +L + L QL E + + T+ + SI+ + S+G W +
Sbjct: 232 EKVLKFNPNHSKVLQQLGWLYHQNTEFQNLETAITYLQQSIDADPSSGQTWYL 284
>gi|423305064|ref|ZP_17283063.1| hypothetical protein HMPREF1072_02003 [Bacteroides uniformis
CL03T00C23]
gi|423310888|ref|ZP_17288857.1| hypothetical protein HMPREF1073_03607 [Bacteroides uniformis
CL03T12C37]
gi|392680313|gb|EIY73685.1| hypothetical protein HMPREF1073_03607 [Bacteroides uniformis
CL03T12C37]
gi|392682563|gb|EIY75907.1| hypothetical protein HMPREF1072_02003 [Bacteroides uniformis
CL03T00C23]
Length = 477
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 154 AVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAR 213
A ++LK ++ T+++ Y G++++AE E A AD A V G+ A AR
Sbjct: 49 AGELLKGKNKKNVELVTSVARAYLDAGQLKEAETYLEMARKADNKAPAVSVLEGDIAFAR 108
Query: 214 EDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQ 273
+D K +LY A+ D+ +A A+K + S ++E ++L+AI P E +
Sbjct: 109 KDIGKACQLYEQAIYFDSNYKDAYLKYAQAYKSASP-SQAIEKLNQLKAIAPDCLEADKE 167
Query: 274 IASLYEITGDVEQASDV 290
+A +Y T +A+D
Sbjct: 168 LAEVYYATNRFGKAADT 184
>gi|121715724|ref|XP_001275471.1| transcriptional corepressor Cyc8, putative [Aspergillus clavatus
NRRL 1]
gi|119403628|gb|EAW14045.1| transcriptional corepressor Cyc8, putative [Aspergillus clavatus
NRRL 1]
Length = 878
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 182 VEQAEK-MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
+E EK ++ E D ++ ++ LG C M++ Y K E Y A+ D ++
Sbjct: 288 IEYLEKSVSAEPPHLDNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWCSI 347
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
G+ + +N+Y D+L+ + + + P + EV Y + +LYE
Sbjct: 348 GVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYE 386
>gi|158522429|ref|YP_001530299.1| hypothetical protein Dole_2418 [Desulfococcus oleovorans Hxd3]
gi|158511255|gb|ABW68222.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 827
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 145 FLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
+L+ +A+D + + D ++A TNL+ G+++ A E + ++
Sbjct: 638 WLQAGKTDRAIDHYQKAIAIDPGFAAAHTNLADALVRTGKIDSALHYLETVAASRPDDAG 697
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
+ G + + LY AL D C L LG+ H + CF +L
Sbjct: 698 LLLKTGILHQQNGNLPAAENLYQKALSIDPGCTACLNRLGMIHAQAGRLDKAAGCFEELA 757
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQA 287
+VP P + Y +A LY +VE A
Sbjct: 758 LLVPDNPVIHYNLACLYARQNEVEPA 783
>gi|406983196|gb|EKE04438.1| hypothetical protein ACD_20C00079G0003 [uncultured bacterium]
Length = 208
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G ++A + + + NS A+ NLG + V + A+ + A YN
Sbjct: 86 GNTDKAVEYLQRVLEINPKNSYAYYNLGIINFNNGNTVTAINNFTTAIKANKKFNAAYYN 145
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LG+++ ++ Y +L+ F+K + P + Y +A YE G+V++A
Sbjct: 146 LGISYYNVKAYKKALKYFNKAHKLNPDNQNICYNLALTYETLGNVKKA 193
>gi|299830552|ref|YP_003735000.1| photosystem I assembly protein ycf3 [Durinskia baltica]
gi|297384916|gb|ADI40215.1| photosystem I assembly protein ycf3 [Durinskia baltica]
Length = 168
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 25/139 (17%)
Query: 218 KGKELYVHALDN--DATCIE--------ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+GK Y AL N +A +E LYN+GL + + +Y+ +LE +H+ A+ ++
Sbjct: 40 QGKGRYAEALQNYYEALQVEEDPYDRSYTLYNIGLIYGNTGKYTQALEFYHQALALNSNL 99
Query: 268 PEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIA 327
P+ L IA +Y ++ L + + D ++L +E+ +A + + + KL A
Sbjct: 100 PQALNNIAVIYH-----------SQALRAQTLEEDEYTELSKELFDKAGEYWIQALKL-A 147
Query: 328 PSIEDNFSNGYNWCVQSIR 346
P DN+ NW + R
Sbjct: 148 P---DNYPGARNWLKVTGR 163
>gi|365157973|ref|ZP_09354216.1| hypothetical protein HMPREF1015_00376 [Bacillus smithii 7_3_47FAA]
gi|363622152|gb|EHL73323.1| hypothetical protein HMPREF1015_00376 [Bacillus smithii 7_3_47FAA]
Length = 217
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 171 NLSFIYFLQ-GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN 229
N I +LQ G+VE+A KM E + + AA++N GN ++ + K + + A++
Sbjct: 4 NAKGIEYLQAGKVEEALKMFTEHIEENPQDPAAYINFGNVLVSVGEMSKAENFFQKAIEV 63
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHK 259
D A Y LG + + N + D++ CF K
Sbjct: 64 DGNAAAAYYALGSLYYNENRFEDAVGCFEK 93
>gi|68164531|gb|AAY87260.1| predicted TPR domain protein [uncultured bacterium BAC17H8]
Length = 500
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFL------QGEVEQAEKMAEEACTADTYNSA 201
+ D ++A +LK C E+ + +F+ +G+ QAE + D N A
Sbjct: 52 LRDKNEANLLLKKCFELVEKYNKSALLWHFVGCAHLTKGQSIQAEAAFRKVIELDPTNFA 111
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A NLGN E + + +E++ A + + NLG ++ L Y DS ECF K
Sbjct: 112 AHTNLGNALKDLERFKEAEEMHKIARNLNPLIASPQINLGSVYEELARYEDSFECFSKAV 171
Query: 262 AIVPSMPEVLYQIAS 276
++ P Y + +
Sbjct: 172 SLDPECSLAKYNLGA 186
>gi|406934936|gb|EKD69050.1| TPR Domain containing protein [uncultured bacterium]
Length = 488
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A NL Y +G V+ A M ++ + NLG + + K E Y+++
Sbjct: 133 AYYNLGIAYSEKGFVDAAIFMYSRVVKTGKGSAQLYNNLGVLYEKKNELKKALECYLNSY 192
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
D C E + N+GL + LN Y+ +++ + K I P + L + +Y +TG +
Sbjct: 193 KMDGKCTEVINNIGLVYAKLNNYNKAIDSYLKTLDIEPENKKALNNLGLIYGLTGKFYDS 252
Query: 288 SDVNENLL 295
+ LL
Sbjct: 253 ISTWKKLL 260
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 140 NKAVTFLRMNDVSQAVD-VLKSCD--EMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N + + ++N+ ++A+D LK+ D A NL IY L G+ + ++ D
Sbjct: 204 NIGLVYAKLNNYNKAIDSYLKTLDIEPENKKALNNLGLIYGLTGKFYDSISTWKKLLNVD 263
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ + + NLG + + + + AL + EAL N G + Y +++
Sbjct: 264 SGDYSTHFNLGVAYLNVGNKTNARYYFESALKINPRSAEALMNSGSLYVQEARYDEAVGE 323
Query: 257 FHKLQAIVPSMPEVLYQIASLY 278
F K+ + PS + Y + ++Y
Sbjct: 324 FKKVIKVDPSFYKAYYNLGTIY 345
>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
Length = 554
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
M + +D L TS A + G E+A + E+A + ++ +NLG
Sbjct: 138 METALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINLG 197
Query: 208 NC--AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
++ R D + E Y AL + EAL+NLG+ + + ++E F + + P
Sbjct: 198 ITLDSLGRVD--EALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYP 255
Query: 266 SMPEVLYQIASLYEITGDVEQASDVNENLL 295
PEV Y++ Y+ G+ E++ + +N L
Sbjct: 256 EHPEVWYELGYCYDRLGEDEKSVEAYDNHL 285
>gi|392972284|ref|ZP_10337676.1| putative uncharacterized protein [Staphylococcus equorum subsp.
equorum Mu2]
gi|403046389|ref|ZP_10901859.1| hypothetical protein SOJ_14680 [Staphylococcus sp. OJ82]
gi|392509997|emb|CCI60979.1| putative uncharacterized protein [Staphylococcus equorum subsp.
equorum Mu2]
gi|402763796|gb|EJX17888.1| hypothetical protein SOJ_14680 [Staphylococcus sp. OJ82]
Length = 221
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GEVE+AEK ++A T D N A + NLGN + + +LY AL + ++ Y
Sbjct: 47 GEVEKAEKFFQKAITLDPENGAIYYNLGNVYYNEGRFSEAIKLYQQALKYNVDLVDTNYM 106
Query: 240 LGLAHKHLNEYSDSL 254
+G++ L + ++L
Sbjct: 107 IGMSFNQLEAFKEAL 121
>gi|296126637|ref|YP_003633889.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018453|gb|ADG71690.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 804
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 15/235 (6%)
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
+ +T +N+ +A+ + E+ + A + IY+ ++A K ++ D
Sbjct: 435 RGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIYYRTENYDEAIKDFKKVLELDN 494
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
N A+ +L EDY + Y ++ D +EA YN LA +N Y++++E F
Sbjct: 495 ENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEAYYNRALAKMEINLYNEAIEDF 554
Query: 258 HKLQAIVPSMPEVLYQIASLY----EITGDVEQASDVNE--NLLLEAVRNDALSQLHREM 311
++ + + I Y E +E + V E N L+A N LS++ ++
Sbjct: 555 KRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKVIEIDNKALDAYYNRGLSKVALKL 614
Query: 312 KHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFL 366
+EA + + A I N+ N YN S +++ L + INKA+ L
Sbjct: 615 YNEAFEDFIR-----AIDINSNYLNAYNGIGFSKTKYSNNELKKG-NINKAIELL 663
>gi|294495566|ref|YP_003542059.1| hypothetical protein Mmah_0891 [Methanohalophilus mahii DSM 5219]
gi|292666565|gb|ADE36414.1| TPR repeat-containing protein [Methanohalophilus mahii DSM 5219]
Length = 1022
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNL---SFIYFLQGEVEQAEKMAEE 191
QD NK + F + +A++ + ++ T + F +L GE +A+ + +
Sbjct: 821 QDALFNKGLAFENIGQYQKAIECYEQLLDVNPQHVTAMEHKGFDLYLLGEYNKADVVYNQ 880
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYS 251
+ N+ A + Y Y L+ CI A YN G A+ +
Sbjct: 881 ILEIEPNNADALYHKATIKYLLSSYAGSIMYYDRLLEVKPNCITAWYNKGFANNMMGNVD 940
Query: 252 DSLECFHKLQAIVPSMPEVLY-QIASLYEI 280
+++EC+ + +I P+ P VLY + +LY I
Sbjct: 941 EAIECYDQALSIDPNNPSVLYNKRFALYRI 970
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENL 294
E LYN GL HK+ + D++E F I PS + Q+ YE G+ + A D N +
Sbjct: 174 EDLYNKGLYHKNEGNHEDAIEHFQAALRINPSKTDSWAQLGECYEAIGEYQTAQD-NYDK 232
Query: 295 LLEAVRNDA 303
L+ ND+
Sbjct: 233 ALQRKPNDS 241
>gi|326436271|gb|EGD81841.1| kinesin light chain isoform 1 [Salpingoeca sp. ATCC 50818]
Length = 659
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 92/238 (38%), Gaps = 61/238 (25%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEA----- 192
E +KA+ F ++ V+ L T+S NL Y+ +GE ++A E+A
Sbjct: 277 EYDKAIAFYE-KALAITVETLGEKHPSTASTYNNLGSAYYSKGEYDKAIAFYEKALAITV 335
Query: 193 --------CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL--------DNDATCIEA 236
TA TYN NLG+ ++ +Y K Y AL + + +
Sbjct: 336 ETLGEKHPSTASTYN-----NLGSAYYSKGEYDKAIAFYEKALAITVETLGEKHPSTADT 390
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQIASLYEITGDVEQAS 288
NLG+A+ +Y ++ K AI PS+ + I LY+ GD EQA
Sbjct: 391 YGNLGIAYHSKGDYDRAIHFHEKDLAITVEALGEKHPSVATSYFNIGLLYDKRGDKEQAC 450
Query: 289 -------DVNENLL-------------LEAVRNDALSQLHREMKHEAE------KCIL 320
DV L L +R A+++ H +H +E +C+L
Sbjct: 451 AYIQHALDVFATTLGPDHPHTLKAERNLRRIRGGAVTRQHTSTQHVSESRLQQQQCLL 508
>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
Length = 554
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
M + +D L TS A + G E+A + E+A + ++ +NLG
Sbjct: 138 METALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINLG 197
Query: 208 NC--AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
++ R D + E Y AL + EAL+NLG+ + + ++E F + + P
Sbjct: 198 ITLDSLGRVD--EALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYP 255
Query: 266 SMPEVLYQIASLYEITGDVEQASDVNENLL 295
PEV Y++ Y+ G+ E++ + +N L
Sbjct: 256 EHPEVWYELGYCYDRLGEDEKSVEAYDNHL 285
>gi|403746363|ref|ZP_10954896.1| pantothenate kinase [Alicyclobacillus hesperidum URH17-3-68]
gi|403120694|gb|EJY55048.1| pantothenate kinase [Alicyclobacillus hesperidum URH17-3-68]
Length = 434
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSC--DEMTSSAATN--LSFIYFLQGEVEQAEKMAEEAC 193
E+ K + + ++ QA E SA T L+ + G +++AE+M EA
Sbjct: 95 ELRKGLAYYDLHMYEQAALAFGKAVTQEGDESAGTRIYLALSHLANGRLQEAERMLAEAS 154
Query: 194 --TADTYNSAAFVNLG-NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
+D A + +G A A+ D+ + LD DA ++ YNLG+ H L ++
Sbjct: 155 QRASDAIEQQAVLEVGVQLAAAKRDWHTAIDRLFDLLDTDADRVDVWYNLGVCHLRLRQW 214
Query: 251 SDSLECFHKLQAI-VPSMPEVLYQIASLYEITGDVEQASDV 290
+ + CF L+A E L +A + GD E A D+
Sbjct: 215 AMAQRCF--LRAYQRRKQTEALLGLALATWMAGDREGAGDL 253
>gi|320352889|ref|YP_004194228.1| hypothetical protein Despr_0763 [Desulfobulbus propionicus DSM
2032]
gi|320121391|gb|ADW16937.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
propionicus DSM 2032]
Length = 210
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
+L IY G +++A E+A D + + +NLG R D + EL AL
Sbjct: 33 HLGLIYRQAGRIDEAIAQLEKAIELDNQSMESMINLGAIFFDRGDTDRALELNQQALAIS 92
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
EA N+GL +H E ++ C+ K I P + + S Y + ++A D
Sbjct: 93 PDMAEAHVNIGLIRQHRGEVDKAVACYSKAVQIDPKLITAWINLTSAYTMLEQDDKAVD 151
>gi|170077053|ref|YP_001733691.1| hypothetical protein SYNPCC7002_A0425 [Synechococcus sp. PCC 7002]
gi|190358880|sp|P19737.2|Y425_SYNP2 RecName: Full=TPR repeat-containing protein SYNPCC7002_A0425
gi|169884722|gb|ACA98435.1| conserved hypothetical protein, TPR domain [Synechococcus sp. PCC
7002]
Length = 387
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEEA 192
+L I AVT+ +ND QA+ L+ ++ S+ + IY Q + QA E+A
Sbjct: 234 ELRIKAAVTWFGLNDRDQAIAFLEEARRLSTRDSAMQIRVGKIYETQNLLPQAIAAYEQA 293
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
D + AF G+ AM EDY+ Y + T A YN +A + +
Sbjct: 294 SFVDPQSREAFALYGSAAMKTEDYINAIIAYRALTELSPTDPAAFYNFAVALQGRRRSRE 353
Query: 253 SLECF 257
+LE
Sbjct: 354 ALEAL 358
>gi|159030914|emb|CAO88597.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 623
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 98 CILTSAKLIAP------SIEDNFSNGYNWCVQSIRNSAHSSLAQ--DLEINKAVTF---- 145
+LT A +I P ++E + G Q A Q L+ N AV F
Sbjct: 8 WVLTLALMIMPPTTVAQTLEQLWQQGETAQAQKKYPEAERIWRQIIQLDPNSAVAFSNLC 67
Query: 146 ---LRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYN 199
R N + +A+ + + D N+ + + Q ++ +AE+M A D
Sbjct: 68 AALFRQNKLDEALIFCQKALALDPKLPEIYKNIGNVLYFQKKLTEAEEMYRRAIALDDKY 127
Query: 200 SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHK 259
+ A+ NLGN ++ + +E+Y AL D ++A NLG+ + N+ +++ E + +
Sbjct: 128 APAYNNLGNVLYEQKKLTEAEEMYRRALALDDKYVDAYNNLGVVLRDQNKLTEAEEMYRR 187
Query: 260 LQAI 263
A+
Sbjct: 188 ALAL 191
>gi|406887121|gb|EKD33989.1| hypothetical protein ACD_75C02516G0009 [uncultured bacterium]
Length = 209
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 150 DVSQAVDVL-KSCDEMTSS--AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
D+ + ++ L K C E S A +L +Y G +A K E+A D S + +NL
Sbjct: 8 DLPKVIEELEKKCKEHPKSVMAFHHLGLVYMKAGRTAEAIKALEKAIELDNLGSESMINL 67
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G + + K +EL AL + +A NLGL + +E+ S+ + K P
Sbjct: 68 GAIYFGQGNLDKAQELNEQALSVNPESAQAHANLGLIWQQRSEFEKSIAAYEKAIKQNPQ 127
Query: 267 MPEVLYQIASLYEITGD 283
+ + S+ + G+
Sbjct: 128 LASAWMNLTSVLTMKGE 144
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 142 AVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ +++ ++A+ L+ D + S + NL IYF QG +++A+++ E+A + +
Sbjct: 34 GLVYMKAGRTAEAIKALEKAIELDNLGSESMINLGAIYFGQGNLDKAQELNEQALSVNPE 93
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
++ A NLG R ++ K Y A+ + A NL
Sbjct: 94 SAQAHANLGLIWQQRSEFEKSIAAYEKAIKQNPQLASAWMNL 135
>gi|355725280|gb|AES08510.1| transmembrane and tetratricopeptide repeat containing 3 [Mustela
putorius furo]
Length = 479
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 106 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 165
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 166 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 222
>gi|428175581|gb|EKX44470.1| hypothetical protein GUITHDRAFT_109591 [Guillardia theta CCMP2712]
Length = 848
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMT----------SSAATNLSFIYFLQGEVEQAEKMA 189
N V N + +A++ K+C E+ S A ++L + QG ++ A
Sbjct: 229 NIGVLLKGRNQIQEAIESFKACLELNPNFQLALQNISLALSDLGTVVKSQGMIDDAINFY 288
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + ++ A NLG + + + K Y + C EA NLG+ +K +
Sbjct: 289 KQALLYNPKSADAMYNLGVAYIEKNEPEKAIICYELTTQMNPRCAEAYNNLGVIYKDFDN 348
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+L+C+ + P+ PE L + ++ + E A
Sbjct: 349 LPRALQCYESALRVKPAFPEALNNMGVVFTMMCQPEDA 386
>gi|320161088|ref|YP_004174312.1| hypothetical protein ANT_16860 [Anaerolinea thermophila UNI-1]
gi|319994941|dbj|BAJ63712.1| hypothetical protein ANT_16860 [Anaerolinea thermophila UNI-1]
Length = 1424
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEA 192
D I T++ + +A ++L +M SS ++ NL+ +Y VE A A A
Sbjct: 1094 DYLIELGWTYMMVEAYEKAAEILSRAVKMESSNSSVWFNLAQVYKHLSRVEDAISCALRA 1153
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
D + F+ A+ EDY + K+ AL+ DA +A+ + + HLN+
Sbjct: 1154 SEVDITHVQGFILASELALENEDYEQAKKYAEMALERDALNPKAIMAMIRVYNHLNKEEQ 1213
Query: 253 SLECFHKLQAIVPSMPEVLYQIASL-YEITG 282
SL L +P + E+ + ASL Y + G
Sbjct: 1214 SLSMLETLHGKLPPILELDLEKASLIYRLRG 1244
>gi|213402715|ref|XP_002172130.1| TPR repeat-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212000177|gb|EEB05837.1| TPR repeat-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 1103
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 47/85 (55%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD+ ++ ++ +G C +A++ Y K E Y A+ D ++G+ + +N+Y D+L
Sbjct: 567 ADSNDAQSWYLIGRCFVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDAL 626
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 627 DAYSRAIRLNPYISEVWYDLGTLYE 651
>gi|398346733|ref|ZP_10531436.1| hypothetical protein Lbro5_05794 [Leptospira broomii str. 5399]
Length = 201
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 208 NCAMAREDYVKGKEL---YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
N +A + K KE + A++ D I+A YN G+ + L + ++E + K I
Sbjct: 68 NAGLAYVNLSKNKEALEKFAEAIEIDPKYIQAYYNQGIIFEKLGNHRSAIESYTKALQIA 127
Query: 265 PSMPEVLYQIASLYEITGD 283
P MP+++Y I YE +G+
Sbjct: 128 PDMPDIVYNIGLAYENSGN 146
>gi|194226638|ref|XP_001915085.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Equus
caballus]
Length = 915
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPTEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|440704285|ref|ZP_20885152.1| hypothetical protein STRTUCAR8_02541, partial [Streptomyces
turgidiscabies Car8]
gi|440274073|gb|ELP62708.1| hypothetical protein STRTUCAR8_02541, partial [Streptomyces
turgidiscabies Car8]
Length = 536
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 113 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAA--T 170
+F + Q++ + +S A + I+ V R ++ S+A D D T
Sbjct: 220 DFPGALEYADQALAQNPYSERALSIRIDALVELGRYDEASKATD---EADAKRPGVPVFT 276
Query: 171 NLSFIYFLQGEVEQAEKMAEEA-CTADTYNSAAFVN--LGNCAMAREDYVKGKELYVHAL 227
+++ L+GEV A ++ E+A +A + A+V+ LG A + +Y E Y AL
Sbjct: 277 RYAYVRELRGEVTVARRVLEQALGSATSRGDIAYVSTTLGQLAWNQGEYKSALEFYARAL 336
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT---GDV 284
D T + AL A + + ++ + + P +P L ++ LYE+ GD+
Sbjct: 337 AADDTYLPALEGRSRAQFADGDLAGAILGMEDVVSRYP-LPGPLVELGELYEVRGGEGDL 395
Query: 285 EQASD 289
+A D
Sbjct: 396 AKARD 400
>gi|13560122|emb|CAC36210.1| small TPR protein [Thermodesulforhabdus norvegica]
Length = 206
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 137 LEINKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
L N V +LR +A+ K CD + A N++ IY QG+ E+ + +A
Sbjct: 33 LHYNLGVAYLRKGLREEALSEFKQAVQCDPRLAQAYVNMAGIYLQQGDFERCIEYNLKAL 92
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
D A+ NLG + Y K E A+ +A +NLGLA+ HL++ +
Sbjct: 93 EVDENLPMAYNNLGFVYLRTNQYEKAVEACKKAVQLMPQLFQAHHNLGLAYFHLDKLDAA 152
Query: 254 LECFHK 259
E F K
Sbjct: 153 KEAFLK 158
>gi|333985572|ref|YP_004514782.1| type 11 methyltransferase [Methylomonas methanica MC09]
gi|333809613|gb|AEG02283.1| Methyltransferase type 11 [Methylomonas methanica MC09]
Length = 445
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 3/159 (1%)
Query: 128 SAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFL---QGEVEQ 184
A +L D + A+ + ++ A ++ ++ E L F+ L +G+ +Q
Sbjct: 7 PAAKALDLDYALALAIRLHQARELDDAEELYRTILEQHPRFPEALHFLGLLMHQKGDNQQ 66
Query: 185 AEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAH 244
A + E+A S A NLGN ED+ K + Y ALD + + A N G+
Sbjct: 67 AIGLIEQAIAEAPAYSDAHNNLGNIFNRLEDFEKAAQSYSQALDLNPENVAAFNNFGVVL 126
Query: 245 KHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
L D++E F K A++P E + + Y+ G+
Sbjct: 127 SQLARIDDAIEAFTKAIALMPENAEFYRNLGNAYKKQGE 165
>gi|254411584|ref|ZP_05025360.1| Sel1 repeat family [Coleofasciculus chthonoplastes PCC 7420]
gi|196181306|gb|EDX76294.1| Sel1 repeat family [Coleofasciculus chthonoplastes PCC 7420]
Length = 338
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Query: 119 NWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFI 175
++ QSI + A ++N+ + ++ +V+ A+ + ++ A NL
Sbjct: 64 DYLAQSIPPLKPTQPAALEQLNQGLRLIQQGNVADAIAAFRQAAQLNPQLAPAHYNLGLA 123
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
G+++ A +A + A+ NLG + ++ + ++ A++ D
Sbjct: 124 LRQAGQLQAAADAFYQATQIAPNFALAYANLGAALLEGKNLPQARDALRRAIELDPELGV 183
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
A YN GL L EY ++ F + + PE Y + +Y G +EQA
Sbjct: 184 AHYNYGLVLSELGEYEVAIAAFQNAMQLSSNAPEPAYHLGLVYLRQGQLEQA 235
>gi|443474936|ref|ZP_21064901.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443020263|gb|ELS34241.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 303
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC----DEMTSSAATNLSFIYFLQGEVEQAEKMAEE 191
D + + ++R+ ++ A+ + ++ E+T A NL Y G++++A +
Sbjct: 49 DQLLERGNAYVRLGNLEGAIVIFRAAIQKNPELTV-AHYNLGLAYAQAGKLKEAIHSFQR 107
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYS 251
A D + A+ NLG + D + A+ D A YNLGLA K + +
Sbjct: 108 ATRLDPKFAIAYSNLGAALLQSGDANRAIPSLQRAISLDPKLSVAYYNLGLALKEKKDIN 167
Query: 252 DSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
++ ++ + P PE +Y + L + G++ +A
Sbjct: 168 GAIANLNQALKLNPQAPETIYNLGLLIQTQGNITKA 203
>gi|438003936|ref|YP_007273679.1| TPR repeat:Sel1-like repeat [Tepidanaerobacter acetatoxydans Re1]
gi|432180730|emb|CCP27703.1| TPR repeat:Sel1-like repeat [Tepidanaerobacter acetatoxydans Re1]
Length = 173
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+GE +QA K+ E D N+ A+ LG ++ E+ + K ++ AL+ + A
Sbjct: 14 RGEYQQARKIYNEILLIDPNNAIAYNKLGVISVREENLEQAKIYFIKALELNPKLSSASS 73
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
NLG + + + +C+ K AI P P +A +Y+ + D+++
Sbjct: 74 NLGNIYFEKGNFEKAKDCYEKAIAIDPDNPVPYNNLAVIYKKSKDIDK 121
>gi|345302037|ref|YP_004823939.1| hypothetical protein Rhom172_0153 [Rhodothermus marinus
SG0.5JP17-172]
gi|345111270|gb|AEN72102.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 465
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
R D A+D L + S A + G E+A + E A + + ++ VNL
Sbjct: 53 RFEDALGAIDRLLALHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNL 112
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G + + + Y AL D E YNLG+ + ++ ++++ + + P
Sbjct: 113 GITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPD 172
Query: 267 MPEVLYQIASLYEITGDVEQA 287
PEV Y++ Y+ GD E++
Sbjct: 173 HPEVWYELGFCYDRLGDDERS 193
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 3/151 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N +T RM+ + +AV L+ + L F Y G+ E++ + D
Sbjct: 145 NLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELD 204
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
Y++ A+ N G + + E Y +AL A YN G A +L + ++E
Sbjct: 205 PYSADAWYNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIES 264
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ K+ I P Y IA YE + E A
Sbjct: 265 YEKVLEIEGGDPATYYNIALAYEELQEYETA 295
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 11/144 (7%)
Query: 136 DLEINKAVTFLRMNDVSQAV---DVLKSCDEMTSSAATN----LSFIYFLQGEVEQAEKM 188
D N+ + RM +AV D + E SA N L+ + L+G +E EK+
Sbjct: 209 DAWYNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKV 268
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
E + + A + N+ ++Y + + AL+ D EA Y LG + L
Sbjct: 269 LE----IEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALE 324
Query: 249 EYSDSLECFHKLQAIVPSMPEVLY 272
+ +++ C + + P E Y
Sbjct: 325 RFEEAIACMERAVTLQPETSEFWY 348
>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 949
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 5/164 (3%)
Query: 136 DLEINKAVTFL---RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
D+ NK + R + + D D + A N ++ G VE+A + A
Sbjct: 230 DVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRA 289
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
D A + N GN A + + +E Y A++ D YNLG+ + L +
Sbjct: 290 IDIDPSLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEE 349
Query: 253 SLECFHKLQAIVPSMPEVLYQIA-SLYEITGDVEQASDVNENLL 295
+LE + +L I P++ E Y +LY + G ++A+ + +L
Sbjct: 350 ALEAYDRLIEIDPNLSEAWYNRGLALYSL-GRYDEAAGCYDRVL 392
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 3/165 (1%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTA 195
NK + F + V +A+D ++ S N + G ++A++ A
Sbjct: 267 FNKGLAFYSLGRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQECYRRAVEI 326
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D S + NLG + E Y ++ D EA YN GLA L Y ++
Sbjct: 327 DPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAG 386
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVR 300
C+ ++ I P +V Y A G E+A D + L R
Sbjct: 387 CYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDEALEAGPR 431
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 11/151 (7%)
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEACTADT 197
K + + +A+D E++ S + N + F G +A + + D
Sbjct: 575 KGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYGEAIESYDRVIELDR 634
Query: 198 YNSA-AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
Y A +LG Y + E Y L+ +A Y GLAH+ L +Y S EC
Sbjct: 635 YEKGEALYSLGR-------YDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDYERSAEC 687
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ ++ I P EV+ + + GD + A
Sbjct: 688 YDRVVEIDPGYEEVILRRGFVLLRLGDYDGA 718
>gi|302673692|ref|XP_003026532.1| hypothetical protein SCHCODRAFT_79755 [Schizophyllum commune H4-8]
gi|300100215|gb|EFI91629.1| hypothetical protein SCHCODRAFT_79755 [Schizophyllum commune H4-8]
Length = 605
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q + A T AD+ ++ ++ LG MA + Y K E Y A+
Sbjct: 218 LGWLYHQDGSSFQNQDEAIHYLTKSLEADSSDAQSWYLLGRAFMAGQKYNKAYEAYQQAV 277
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D+ ++G+ + +N++ D+L+ + + I P + EV + + SLYE
Sbjct: 278 YRDSRNPTFWCSIGVLYFQINQFRDALDAYSRAIRINPYISEVWFDLGSLYE 329
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM---PEVLYQIASLYEITGDVEQASDVN 291
E L+ LG+ +K +Y+DSL CFH++ PS ++ +QI ++E D QA +
Sbjct: 142 EILFRLGIIYKQQCKYTDSLNCFHQILRNPPSPLAHADIWFQIGHVHEQQKDFVQAKEAY 201
Query: 292 ENLL 295
E ++
Sbjct: 202 ERVV 205
>gi|270294686|ref|ZP_06200888.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270276153|gb|EFA22013.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 481
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 154 AVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAR 213
A ++LK ++ T+++ Y G++++AE E A AD A V G+ A AR
Sbjct: 53 AGELLKGKNKKNVELVTSVARAYLDVGQLKEAETYLEMARKADNKAPAVSVLEGDIAFAR 112
Query: 214 EDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQ 273
+D K +LY A+ D+ +A A+K + S ++E ++L+AI P E +
Sbjct: 113 KDIGKACQLYEQAIYFDSNYKDAYLKYAQAYKSASP-SQAIEKLNQLKAIAPDCLEADKE 171
Query: 274 IASLYEITGDVEQASDV 290
+A +Y T +A+D
Sbjct: 172 LAEVYYATNRFGKAADT 188
>gi|350535410|ref|NP_001233937.1| probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Solanum
lycopersicum]
gi|75330646|sp|Q8RVB2.1|SPY_SOLLC RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; Short=LeSPY
gi|19913115|emb|CAC85168.1| SPY protein [Solanum lycopersicum]
gi|19913117|emb|CAC85169.1| SPY protein [Solanum lycopersicum]
Length = 931
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 19/186 (10%)
Query: 146 LRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA-- 202
L S+A+ V D + A T+ +Y +G + +A + E+A AD +Y AA
Sbjct: 100 LAFESFSEAIKV----DPQNACALTHCGILYKDEGRLVEAAESYEKALKADPSYTPAAEC 155
Query: 203 ----FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
++G + +G + Y A+ D+ A YNLG+ + + +Y +L C+
Sbjct: 156 LAIVLTDIGTSLKLAGNTQEGIQKYYEAIKIDSHYAPAYYNLGVVYSEMMQYDMALNCYE 215
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHRE 310
K P E + +++ GD+E A E L E +N+ AL+ L +
Sbjct: 216 KAALERPMYAEAYCNMGVIFKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTK 275
Query: 311 MKHEAE 316
+K E +
Sbjct: 276 VKLEGD 281
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V F D+ A+ + C ++ + A T+L L+G++ Q
Sbjct: 230 NMGVIFKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYY 289
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 290 KKALCYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN 349
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ +I P+ + L + +Y + G ++ A+ + E ++
Sbjct: 350 LDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAII 396
>gi|353227366|emb|CCA77876.1| hypothetical protein PIIN_00522 [Piriformospora indica DSM 11827]
Length = 1400
Score = 45.8 bits (107), Expect = 0.036, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 44/84 (52%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D+ ++ ++ LG M + Y K E Y A+ D ++G+ + +N++ D+L+
Sbjct: 320 DSSDAQSWYLLGRAYMTSQKYNKAYEAYQQAVYRDGRNPTFWISIGVLYFQINQFKDALD 379
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P +PEV + + SLYE
Sbjct: 380 AYSRAIRLNPYIPEVWFNLGSLYE 403
Score = 42.0 bits (97), Expect = 0.56, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVP---SMPEVLYQIASLYEITGDVEQASDVN 291
E + LG+ +K L Y +SL+CF ++ P S ++ +QI +YE D + A D
Sbjct: 172 EIYFRLGIIYKQLQRYQESLKCFDQILRNPPHPLSQMDIWFQIGHVYEQQKDYDNARDAW 231
Query: 292 ENLLLEA 298
E +L +A
Sbjct: 232 ERVLQDA 238
>gi|326435520|gb|EGD81090.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 819
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 45/234 (19%)
Query: 127 NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAE 186
N+ S+ A + ++A+ F D++ V+ L T+ NL Y+ +G ++A
Sbjct: 400 NNLGSAYASKGDYDRAIAFYE-KDLAITVETLGEKHPSTADTYNNLGNAYYSKGAYDRAI 458
Query: 187 KMAEEA-------------CTADTYN--SAAFVNLGNCAMAREDYVKGKELYVHALDNDA 231
E+A TA TYN A+ N G A Y + + V L
Sbjct: 459 HFYEKALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQALAITVEVLGKKH 518
Query: 232 TCIEALYN-LGLAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQIASLYEITG 282
YN LG A+K+ +Y ++EC+ K +A+ P L I L++ G
Sbjct: 519 PSTAQTYNNLGNAYKNKGDYGKAIECYEKARAVYVEALGEKHPYTAMTLANIGLLHDKRG 578
Query: 283 DVEQASDVNENLL--------------------LEAVRNDALSQLHREMKHEAE 316
+ EQA + L L +R A+++ H +H +E
Sbjct: 579 EKEQACAYTQQALDAFTTTLGPDHPNTRKAERNLRRIRGGAVTRQHTSRQHVSE 632
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 67/167 (40%), Gaps = 36/167 (21%)
Query: 171 NLSFIYFLQGEVEQA------------EKMAEE-ACTADTYNSAAFVNLGNCAMAREDYV 217
NL YF +G ++A E + E+ TA+TYN NLGN + DY
Sbjct: 317 NLGNAYFSKGAYDRAIHYYDKALAIKVETLGEKHPSTAETYN-----NLGNAYARKGDYD 371
Query: 218 KGKELYVHAL--------DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV----- 264
K ELY AL + + E NLG A+ +Y ++ + K AI
Sbjct: 372 KAIELYEKALAIKVETLGEKHPSTAETYNNLGSAYASKGDYDRAIAFYEKDLAITVETLG 431
Query: 265 ---PSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLH 308
PS + + + Y G ++A E L A+ +AL + H
Sbjct: 432 EKHPSTADTYNNLGNAYYSKGAYDRAIHFYEKAL--AITAEALGEKH 476
>gi|407456229|ref|YP_006734802.1| penicillin binding transpeptidase domain-containing protein
[Chlamydia psittaci VS225]
gi|405783490|gb|AFS22237.1| penicillin binding transpeptidase domain protein [Chlamydia psittaci
VS225]
Length = 1448
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 1132 FFLSGEYEQAEQRLKETLELDPTAALAYCYLGIIALESGRTAEALTWCTKGLESEPADSY 1191
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y++++ECF K+
Sbjct: 1192 LRYCYGVALDRDNRCEEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKIL 1251
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ LY A
Sbjct: 1252 ELDPWNPQSLYNKA 1265
>gi|282899920|ref|ZP_06307881.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195190|gb|EFA70126.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 302
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 3/154 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N L N++ A+D LK+ D A NL LQ + +QA ++A
Sbjct: 117 NLGGALLEGNNLPLAIDYLKTALQLDPKLGFAHYNLGLARQLQKDWQQAIASFQQAIIYS 176
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
++ +LGNC + + K ++ A+ ++ EA YNLGL + DSL
Sbjct: 177 PNSAEPVYHLGNCYLQQGKLELAKSTFIKAISLNSNYTEAHYNLGLILFEQGQLQDSLSA 236
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
F K + P Y ++ EQA V
Sbjct: 237 FRKAAQTNYNYPNAYYGAGLVFVQLKQYEQAIKV 270
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 7/154 (4%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
+NK + + V A+ + D + A NL G+++ A +A A
Sbjct: 48 LNKGLKAIAEGKVQDAIIAFRQAAQLDPALAPAHYNLGLALRQTGKLQPAADAFYQATQA 107
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++AF NLG + + + AL D A YNLGLA + ++ ++
Sbjct: 108 DPQFASAFANLGGALLEGNNLPLAIDYLKTALQLDPKLGFAHYNLGLARQLQKDWQQAIA 167
Query: 256 CFHKLQAIV--PSMPEVLYQIASLYEITGDVEQA 287
F QAI+ P+ E +Y + + Y G +E A
Sbjct: 168 SFQ--QAIIYSPNSAEPVYHLGNCYLQQGKLELA 199
>gi|255072419|ref|XP_002499884.1| glycosyltransferase family 41 protein [Micromonas sp. RCC299]
gi|226515146|gb|ACO61142.1| glycosyltransferase family 41 protein [Micromonas sp. RCC299]
Length = 864
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+V A + E A T D ++ A NLG + + Y L C EA N
Sbjct: 246 GDVALAVRTYERALTLDPNSAEAMYNLGVAQAEIGELDRATIAYESTLRLRPHCAEAWNN 305
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LG+ H+ N ++EC+ + AI PS + L + +Y + G A
Sbjct: 306 LGVLHRERNNVERAVECYRRAVAINPSFAQPLNNLGVVYTMQGQARMA 353
>gi|317481340|ref|ZP_07940408.1| tetratricopeptide [Bacteroides sp. 4_1_36]
gi|316902436|gb|EFV24322.1| tetratricopeptide [Bacteroides sp. 4_1_36]
Length = 481
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 154 AVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAR 213
A ++LK ++ T+++ Y G++++AE E A AD A V G+ A AR
Sbjct: 53 AGELLKGKNKKNVELVTSVARAYLDAGQLKEAETYLEMARKADNKAPAVSVLEGDIAFAR 112
Query: 214 EDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQ 273
D K +LY A+ D+ +A A+K + S ++E ++L+AI P E +
Sbjct: 113 NDIGKACQLYEQAIYFDSNYKDAYLKYAQAYKSASP-SQAIEKLNQLKAIAPDCLEADKE 171
Query: 274 IASLYEITGDVEQASDV 290
+A +Y T +A+D
Sbjct: 172 LAEVYYATNRFGKAADT 188
>gi|168061951|ref|XP_001782948.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665566|gb|EDQ52246.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 899
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A + +A AD TY +A+ +LG
Sbjct: 86 DAQNACALTHCGILYKEEGHLLEAAEAYRKALMADPTYKAASENLAVVLTDLGTSLKLSG 145
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+G Y AL D+ A YNLG+ + + +Y +L C+ K A P E +
Sbjct: 146 HVQEGLAKYYDALKADSRYAPAYYNLGVVYSEMMQYDMALSCYEKAAANRPMYAEAYCNM 205
Query: 275 ASLYEITGDVEQASDVNENLLL------EAVRND---ALSQLHREMKHEAE 316
+Y+ GD++ A E+ L E +N+ AL+ L ++K E +
Sbjct: 206 GVIYKNRGDLDAAISCYESRCLAVSPNFEIAKNNMAIALTDLGTKVKIEGD 256
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A T+L ++G++ Q ++A + + + A NLG + +Y AL
Sbjct: 243 ALTDLGTKVKIEGDIHQGVACYKKALLYNWHYADAMYNLGVAYGELLKFDMAVVMYELAL 302
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ C EA NLG+ +K + ++EC+ I P+ + L + +Y + G ++ A
Sbjct: 303 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALQIKPNFSQSLNNLGVVYTVQGKMDSA 362
Query: 288 SDVNENLLL------EAVRNDALSQLHRE 310
+ + E +L EA N L LHR+
Sbjct: 363 ASMIEKAILANPSYAEAYNN--LGVLHRD 389
>gi|449550411|gb|EMD41375.1| hypothetical protein CERSUDRAFT_79035 [Ceriporiopsis subvermispora
B]
Length = 1143
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q +++A + T AD ++ ++ LG MA + Y K E Y A+
Sbjct: 271 LGWLYHQDGSGFQNQELAIQYLTKSLEADPSDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 330
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N++ D+L+ + + I P + EV + + SLYE
Sbjct: 331 YRDGRNPTFWCSIGVLYFQINQFRDALDAYSRAIRINPYISEVWFDLGSLYE 382
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVP---SMPEVLYQIASLYEITGDVEQASDVN 291
E L+ LG+ +K +Y SL+CF ++ P + ++ +QI ++E D E+A D
Sbjct: 195 EILFRLGIIYKQQGKYEQSLDCFDRILRNPPNPLAHGDIWFQIGHVFEQQRDHERARDAY 254
Query: 292 ENLLLE 297
E ++LE
Sbjct: 255 ERVVLE 260
>gi|358058233|dbj|GAA95910.1| hypothetical protein E5Q_02568 [Mixia osmundae IAM 14324]
Length = 1303
Score = 45.8 bits (107), Expect = 0.040, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 206 LGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
LG M ++ K E Y A+ D ++G+ + +N++ DSL+ + + I P
Sbjct: 434 LGRAFMTTSNFGKAYEAYQQAVYRDGKNAAFWCSIGVLYYEINQFHDSLDAYSRAIRINP 493
Query: 266 SMPEVLYQIASLYEITGD-VEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAK 324
+ EV + + +LYE D + A D E L N+ ++Q ++++ T A
Sbjct: 494 YISEVWFNLGALYESCNDQMTDAIDAYERTLSLDRNNEVVAQRLQDIRAHQR----TGAP 549
Query: 325 LIAPSIEDNFS-NGYNWCVQSIRNSAHSSLAQ 355
L+ P + S +W + N S+L+Q
Sbjct: 550 LLRPPQPIDISPASQSWQIADSANGPPSALSQ 581
>gi|291288388|ref|YP_003505204.1| hypothetical protein Dacet_2488 [Denitrovibrio acetiphilus DSM
12809]
gi|290885548|gb|ADD69248.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 510
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 9/160 (5%)
Query: 154 AVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCA 210
A++++K S D+ NL IY G+ E AE A S AF NLG
Sbjct: 59 ALELMKQAVSLDKTNPVFHNNLGEIYRQTGQFEHAEFHLSSAAELKPNYSDAFSNLGLLY 118
Query: 211 MAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEV 270
R K + AL +D + AL N G Y D+++C+ I P P
Sbjct: 119 KERGLVNDAKYCFAEALQSDPKNLSALINTGNLFNSEGSYEDAIQCYEAALEISPDNPNA 178
Query: 271 LYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHRE 310
L + Y TG+ ++ L+ + +LHR+
Sbjct: 179 LASAGAAYYKTGEYNTSAKYYSRLV------NGHPELHRD 212
>gi|307106839|gb|EFN55084.1| hypothetical protein CHLNCDRAFT_134977 [Chlorella variabilis]
Length = 739
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSSAA---TNLSFIYFLQGEVEQAEKMA--EEACT 194
N A +L+ V QA++ + + A +L ++ LQGE +A A EA
Sbjct: 209 NMAAAYLQKGLVLQAMEAYNAALAIAPGLAEVRVSLGDLWRLQGEAGRAAAAACYTEALR 268
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+ +AA+ LG+ D + Y AL + +C +A LG+A + L ++
Sbjct: 269 GERRCAAAWRGLGDVRREAGDATQAVACYQEALRLEPSCADAHTGLGVALRELGRRGEAE 328
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
FH + A+ P L +A +Y G +E+A
Sbjct: 329 AAFHAVVALRPECALALGNLAGMYYDQGKLEEA 361
>gi|428319215|ref|YP_007117097.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
gi|428242895|gb|AFZ08681.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
Length = 3281
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%)
Query: 160 SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
+ D A NL+ I+ QG+VE A E+A A A +NL + + ++
Sbjct: 738 AIDPNIPQTAYNLAKIFEEQGQVEAAIAHYEQALVAQPDFVPALINLAVALQEKGELLRA 797
Query: 220 KELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+LY AL+ EA NL + D+LE +HK ++P E + + +
Sbjct: 798 IDLYRRALEIHPHSWEAYNNLATVLQEQGNLEDALEYYHKALELLPDFVEAINNLGRTFL 857
Query: 280 ITGDVEQA 287
G VE A
Sbjct: 858 EKGAVEDA 865
>gi|406980521|gb|EKE02109.1| hypothetical protein ACD_20C00425G0006 [uncultured bacterium]
Length = 202
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKMAEE 191
+DL INKA+ R + A++ K ++T S +L +Y + E +QA + ++
Sbjct: 5 KDL-INKALNHSRNGEFDLAIENYKKAAKITPDDESIYCSLGAVYSKKAEYDQAIRNYKK 63
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYS 251
A + N A +G+ + + Y + + +L + + YNLG A+ EY
Sbjct: 64 AIDLNPDNFKAHTAIGSAYIKNKKYDQALKHLNKSLSINPNYAKTYYNLGNAYSKQGEYD 123
Query: 252 DSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
+++ + K + P ++ Y++ +Y+ GD E+++
Sbjct: 124 LAIDSYKKALLLSPKSSKISYRLGLVYKFKGDYERSA 160
>gi|334119867|ref|ZP_08493951.1| methyltransferase FkbM family [Microcoleus vaginatus FGP-2]
gi|333457508|gb|EGK86131.1| methyltransferase FkbM family [Microcoleus vaginatus FGP-2]
Length = 1490
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 163 EMTSSAA--TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
E+ S+A + L+ +Y QG++E A + E+ + + LGN A+ + K
Sbjct: 1299 EIESAAVPLSQLAELYLTQGKLEDAIAVCEQVLKIQPTFAPPYKTLGNALQAQGKLEEAK 1358
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
Y+ AL+ AL NLG + + +++ C+ K AI P+ ++ ++
Sbjct: 1359 SWYLRALEIQPDFAPALANLGTINAQQQHWQEAIACYQKALAIQPNFAGAYRNLSRVFSQ 1418
Query: 281 TGDVEQA 287
G ++A
Sbjct: 1419 IGKPDEA 1425
>gi|94969466|ref|YP_591514.1| hypothetical protein Acid345_2439 [Candidatus Koribacter versatilis
Ellin345]
gi|94551516|gb|ABF41440.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 448
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 136/349 (38%), Gaps = 50/349 (14%)
Query: 68 SNINRKKNARAVRNDALSQ--LHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSI 125
S + +K R DA++ L R + HE + + A I D+++ YN ++
Sbjct: 88 SETDLQKAIRLAPEDAVAHNSLGRTLFHEGKYEDSAGSYRKAIEIHDDYAEAYNGLGAAL 147
Query: 126 RN------------SAHSSLAQDLEI--NKAVTFLRMNDVSQAVDVLKSCDEMTSSAATN 171
SA S ++++ N L A+ L+ + A
Sbjct: 148 LKLGKTDEAIGAFQSAASKDPKNVDALSNAGAALLHAQKAQDALPYLEKAKALKPDAPDV 207
Query: 172 L-SFIYFLQ--GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD 228
L ++ LQ G +A E+A D ++ A+ LG A + Y + + + +L
Sbjct: 208 LENYANALQQLGRTNEAITEYEKALKGDPKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLH 267
Query: 229 NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
DA E L+ LG A+ + +++ + K A+ P P+ LY + YE + +A
Sbjct: 268 LDAHQPEVLFLLGAAYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAI 327
Query: 289 DVNENLLLEAVRND---ALSQLH--REMKHEAEKCILTSAKLIA-----PSIEDNFSNG- 337
D + L A R + AL+ L + ++ + I T KL+ P I NF+
Sbjct: 328 DSYQKAL--AARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATAL 385
Query: 338 ------------YNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQA 374
Y V+ + AH+ N ++ LR+ND + A
Sbjct: 386 FNKGNFKEAAENYREAVKLKPDFAHA------HYNLGMSLLRLNDAAGA 428
>gi|228475211|ref|ZP_04059937.1| TPR domain protein [Staphylococcus hominis SK119]
gi|228270822|gb|EEK12224.1| TPR domain protein [Staphylococcus hominis SK119]
Length = 223
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E+AE+ ++A T D N A + NL N + + + +LY AL + I+A Y
Sbjct: 48 GEIEKAERFFQKAITLDDKNGAVYYNLANLYYEQSRFQEAIKLYQRALKYNMNPIDANYM 107
Query: 240 LGLAHKHLNEYSDSLECF 257
+G++ L+ ++L F
Sbjct: 108 IGMSFSQLDAQREALPFF 125
>gi|145552589|ref|XP_001461970.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429807|emb|CAK94597.1| unnamed protein product [Paramecium tetraurelia]
Length = 310
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 37/185 (20%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N+A + SQA+D+LK D+ + A NL +Y+ Q ++E ++ EA
Sbjct: 73 NQATLLIETEKYSQALDLLKQALKTDQNNAEAHNNLGVLYYKQNKLELSQNEYMEAIKLK 132
Query: 197 TYNSAAFVNLGNCAMAREDY----------VKGKELYVHALDNDATCI------------ 234
+N A N G A++DY +K K +V A N T +
Sbjct: 133 VHNPEAHSNQGVIFCAKQDYSQALQCFDEAIKLKNDFVKAYHNKGTTLYEKENFKEAVEI 192
Query: 235 ------------EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
E YN +A + L ++ D+L + + P M + + +L G
Sbjct: 193 YDKAIKGKTQDPETYYNKSIALQGLEQFDDALNALEQAYKLSPEMALLYVEKGTLMYRKG 252
Query: 283 DVEQA 287
V++A
Sbjct: 253 KVDEA 257
>gi|443924173|gb|ELU43241.1| TPR-containing protein Mql1 [Rhizoctonia solani AG-1 IA]
Length = 424
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 14/173 (8%)
Query: 121 CVQSIRNSAHSSLAQ-DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATN-------L 172
C + I + + L D+ + +M DVS A K E + N L
Sbjct: 203 CFERIHRNPPAPLTNIDIWFQIGHVYEQMKDVSAAYTAAKDAYERVLKDSPNHAKVLQQL 262
Query: 173 SFIYFLQGEVEQAEKMAEEACTADTYNSAAFVN------LGNCAMAREDYVKGKELYVHA 226
++Y G + A T + +F + LG MA + Y K E Y A
Sbjct: 263 GWLYHQAGAPFANQDTAIVLLTKSLESGRSFADPQSWYLLGRAYMAGQKYQKAYESYQQA 322
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ D ++G+ + ++N++ D+L+ + + I P + EV + + SLYE
Sbjct: 323 VYRDGRNPTFWCSIGVLYYNINQFRDALDAYSRAIRINPYISEVWFDLGSLYE 375
>gi|430814453|emb|CCJ28300.1| unnamed protein product [Pneumocystis jirovecii]
Length = 828
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + ++ LG C M ++ Y K E Y A+ D ++G+ + +N+Y D+L+
Sbjct: 319 DNRDVQSWYFLGRCYMVQQKYNKAYEAYQQAVYRDGRNPIFWCSIGVLYYQINQYRDALD 378
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 379 AYSRAIRLNPYISEVWYDLGTLYE 402
>gi|149173314|ref|ZP_01851945.1| O-linked GlcNAc transferase [Planctomyces maris DSM 8797]
gi|148848120|gb|EDL62452.1| O-linked GlcNAc transferase [Planctomyces maris DSM 8797]
Length = 316
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 141 KAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
+A T + ++ +A+++ + S A +++ YF + +A K EE
Sbjct: 12 QARTLQKSREIVKAIEIYERILSIKPAEKKAHVSIATAYFQLQQYPEAIKHFEEMTRLAP 71
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+++ ++N+G +Y ++ A+ D +A YN+G+AHK LN+ S ++ +
Sbjct: 72 MDASPYINMGAIYNRMGEYKTALDVLRKAVQKDKKSADAFYNMGIAHKGLNQLSMAVTAY 131
Query: 258 HKLQAIVPSMPEVLYQIASLY 278
+ I M + + + ++Y
Sbjct: 132 KQAIVINGQMVDAYFNLGNVY 152
>gi|253702403|ref|YP_003023592.1| hypothetical protein GM21_3815 [Geobacter sp. M21]
gi|251777253|gb|ACT19834.1| TPR repeat-containing protein [Geobacter sp. M21]
Length = 399
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 139 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
++ + F + D ++A LK S D + A L+ Y QG+ ++A K + +
Sbjct: 33 LSSGLAFYQKKDYARATSELKRAISMDPTNTQAYKYLAGAYQAQGKTDEAIKTYKYSLAL 92
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ +LGN + ++ Y + + A D T A Y LG + Y ++
Sbjct: 93 DPTQASVHTSLGNVYLQQKKYNLAEREFKDAGKLDPTDTLAPYTLGQLYVQTERYGEAEA 152
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITG 282
F K+ + P+ P Y + ++Y G
Sbjct: 153 QFKKVSRMAPTDPNPYYSLGAVYNKEG 179
>gi|302412911|ref|XP_003004288.1| glucose repression mediator protein CYC8 [Verticillium albo-atrum
VaMs.102]
gi|261356864|gb|EEY19292.1| glucose repression mediator protein CYC8 [Verticillium albo-atrum
VaMs.102]
Length = 861
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E++ AD ++ ++ LG C M+++ Y K E Y A+ D ++G+ + +N+
Sbjct: 276 EKSVAADQNDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQ 335
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASL 277
Y D+L+ + + + P + EV Y + +L
Sbjct: 336 YRDALDAYSRAIRLNPFISEVWYDLGTL 363
>gi|224094184|ref|XP_002196319.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
isoform 1 [Taeniopygia guttata]
gi|449481564|ref|XP_004176150.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
isoform 2 [Taeniopygia guttata]
Length = 914
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D T + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLRALELDRTNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L + +++L+ F++ + P+ L+ A L + +GD + + LL
Sbjct: 602 NLAIVYIELKDPTEALKNFNRALELNPTHKLALFNSALLMQESGDARLRPEAKQRLL 658
>gi|395844096|ref|XP_003794801.1| PREDICTED: tetratricopeptide repeat protein 12 [Otolemur garnettii]
Length = 705
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%)
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
F++G+ E A + E + N M EDY K AL D C +A
Sbjct: 117 FVKGDYEAAIRCYTEGLEKLKDMKVLYTNRAQAYMKLEDYEKALADCEWALKCDEKCTKA 176
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+++G AH L YS S EC+ K+ I PS+
Sbjct: 177 YFHMGKAHLALKNYSMSRECYKKILEITPSL 207
>gi|384217452|ref|YP_005608618.1| hypothetical protein BJ6T_37560 [Bradyrhizobium japonicum USDA 6]
gi|354956351|dbj|BAL09030.1| hypothetical protein BJ6T_37560 [Bradyrhizobium japonicum USDA 6]
Length = 568
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 141 KAVTFLRMNDVSQAV-DVLKSCDEMTSSAATNL-SFIYFLQGEVEQAEKMAEEACTADTY 198
+AV + + D S+A+ D ++ S AA NL Y+ +G+ + A ++A
Sbjct: 67 RAVGWNKKGDYSKAIADTTEAIRLQPSQAAYNLRGSAYYDKGDYDIAIADFDDALKLGPA 126
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+ F N GN + DY K Y + + N GLA + L + +L +
Sbjct: 127 DGTIFHNRGNAWRGKGDYAKAIADYDATIKLQPKSTFSFQNRGLAKEALGDLDGALADIN 186
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLL 296
+ + P++P+ L +++ + GD+++A +D +E + L
Sbjct: 187 QAIRLDPTLPQPLINRTAIWRVRGDLDRAIADGSEAIRL 225
>gi|85858724|ref|YP_460926.1| hypothetical protein SYN_00192 [Syntrophus aciditrophicus SB]
gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
SB]
Length = 563
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 18/214 (8%)
Query: 100 LTSAKLIAPSIEDNFSNGYNW--------------CVQSIRNS-AHSSLAQDLEINKAVT 144
L S K I+ +++ GY++ +Q + + H L+ L A
Sbjct: 25 LKSGKEISGRDPSSYTAGYHYTLGVLSALDGRLDDAIQELETALRHDPLSSHLMKELASL 84
Query: 145 FLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
++ D +AVD+ K D L +Y + + A + + D N++
Sbjct: 85 YVEKGDFRRAVDLCKESLVHDPDDVDVHLILGNLYINMKDYKNAIRSYRKVIEIDPKNTS 144
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A++ LG E Y K ++Y L ND + Y + L S++ + F K
Sbjct: 145 AYLYLGTLYAETERYDKAVDMYSLLLKNDHDNVMGTYYMAKVLVELRRESEAEQYFKKTL 204
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ PS+ L +A LYE +EQA ++ ++ +
Sbjct: 205 LLKPSLESALIDLALLYERQKKLEQAVNIYKDFI 238
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 59/124 (47%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
SA +L+ +Y Q ++EQA + ++ + LG + + +Y + ++ +
Sbjct: 212 SALIDLALLYERQKKLEQAVNIYKDFIQRYPEQVGIRLRLGEFYLRQGNYQAAEAVFRDS 271
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
L D + + + LGL + Y ++E F K + PS ++ Y +AS+Y+ + ++
Sbjct: 272 LTIDDSNKDVHFTLGLLYYEQQRYDRAIEAFQKALKLAPSDQKIYYFLASVYDEQQENDK 331
Query: 287 ASDV 290
A D
Sbjct: 332 AMDT 335
>gi|384261589|ref|YP_005416775.1| hypothetical protein RSPPHO_01179 [Rhodospirillum photometricum DSM
122]
gi|378402689|emb|CCG07805.1| Putative uncharacterized protein [Rhodospirillum photometricum DSM
122]
Length = 858
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 134 AQDLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAE 190
+Q+ +++A++ + +++A + ++ D +A L + G ++A +
Sbjct: 72 SQEALLDRALSLHQQGQLAEAETLYRTVLDQDGRNPTALKYLGAVLMQLGRPQEARPLLL 131
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
A D + F LGN ++ K E + AL + T A NLG+ HK NE
Sbjct: 132 IAAGHDKNDPEIFDFLGNALAQADEKQKALESFCRALSLNPTFTSAWNNLGMMHKRFNEA 191
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASL 277
+ CF + +I P M E L +L
Sbjct: 192 PQAEFCFQRALSINPKMTEALNNYGNL 218
>gi|427735486|ref|YP_007055030.1| hypothetical protein Riv7116_1944 [Rivularia sp. PCC 7116]
gi|427370527|gb|AFY54483.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 314
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 3/157 (1%)
Query: 122 VQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGE 181
Q RN+A + L Q L++ + R D A D + A NL G+
Sbjct: 44 AQYTRNTATTYLNQGLQL---IQTGRPQDAINAFKQAIQLDPSLAPAYYNLGLALRQVGQ 100
Query: 182 VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
++ A +A + + A+ NLG + + + + +L+ D+ A YNLG
Sbjct: 101 LQPAADAFYQATRVNPKFALAYANLGGALLEGNNLGQAENYLQRSLEIDSKLGVAYYNLG 160
Query: 242 LAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
L H+ + S +++ F K PE YQI Y
Sbjct: 161 LLHQQKEDCSKAVKSFRKAMKYSNKAPEPAYQIGLCY 197
>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 1056
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
IN+ + R + ++A+ D+ + A N + QGE ++A + A
Sbjct: 574 INRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQI 633
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D S F+N G + +Y + Y AL D A N G ++ EY ++
Sbjct: 634 DPMYSTGFINRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTFQNRGEYDLAIV 693
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLL-----EAVRNDALSQLHR 309
+ K I P + Y ++ + GD+E++ +D+ E + L EA ++ L+ H
Sbjct: 694 DYDKAILIKPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAEAYQDRGLT-FH- 751
Query: 310 EMKHEAEKCI--LTSAKLIAPSIEDN 333
K EA++ + A + P E++
Sbjct: 752 -AKGEADRALADFAEAARLKPEFEND 776
>gi|118350024|ref|XP_001008293.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89290060|gb|EAR88048.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 373
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 83 ALSQLHREM--KHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEIN 140
+L L++++ +A++CIL + ++ S+ GY + ++++ + + L+I
Sbjct: 68 SLGYLYKKIGKPQKAKECILKALEINPKSVFSLLELGYLYEDMNMQDEQKQTYMKILQIE 127
Query: 141 K---------AVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKM 188
+ + + N + +A E+ S NL I GE E A++
Sbjct: 128 PKNFEAQYGLGLYYFKQNMLQEARHWFLQVLEINPNFKSVVYNLGIISEKLGEYENAKQF 187
Query: 189 AEEACTADTYNSAAFVNLG-------NCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
++A + ++ + NLG N AR+ Y+K ++L + I AL NLG
Sbjct: 188 YQKAIQLNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQQL-------EPKSIYALNNLG 240
Query: 242 LAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ L ++ ++ +CF + I P Y ++++Y G++E++
Sbjct: 241 AIYFDLGQFQEAQKCFEDIIKIDPQNFGAYYNLSAIYIKKGNIEES 286
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 87/218 (39%), Gaps = 14/218 (6%)
Query: 91 MKHEAEKCILTSAKLIAPSIED-NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTF---- 145
M E++ C+L + + I P E+ + S GY + A + + LEIN F
Sbjct: 44 MIEESKSCLLKALE-INPQFENAHTSLGYLYKKIGKPQKAKECILKALEINPKSVFSLLE 102
Query: 146 -------LRMND-VSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
+ M D Q + + A L YF Q +++A + +
Sbjct: 103 LGYLYEDMNMQDEQKQTYMKILQIEPKNFEAQYGLGLYYFKQNMLQEARHWFLQVLEINP 162
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+ NLG + +Y K+ Y A+ + +NLG+ ++ + ++ +C+
Sbjct: 163 NFKSVVYNLGIISEKLGEYENAKQFYQKAIQLNPQDANTYFNLGVTYEKMKNVEEARKCY 222
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
K+Q + P L + ++Y G ++A E+++
Sbjct: 223 LKVQQLEPKSIYALNNLGAIYFDLGQFQEAQKCFEDII 260
>gi|332706737|ref|ZP_08426798.1| hypothetical protein LYNGBM3L_21080 [Moorea producens 3L]
gi|332354621|gb|EGJ34100.1| hypothetical protein LYNGBM3L_21080 [Moorea producens 3L]
Length = 337
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 101/258 (39%), Gaps = 32/258 (12%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEACT 194
++N+ + ++ + V +A+ + ++ A NL G+++ + A
Sbjct: 82 QLNQGLALIQQSKVLEAIVAFEKAAQLNPKLAPAHYNLGLALRQVGKLQASADAFYRATQ 141
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D + AF NLG + ++ + +E AL+ D A YN+GL L + ++
Sbjct: 142 TDPKFALAFANLGAALLEGKNLSQAREYLERALELDPKLGVAHYNMGLVMSQLRTPAQAI 201
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVR-NDALSQLHREMK- 312
F + + PE Y + +Y G +E+A E +A++ N + H +
Sbjct: 202 ASFKQAMEFSRNAPEPAYHLGLIYRQQGKLEEAKKAFE----QAIKINPKYPEAHYNIGG 257
Query: 313 ---HEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMN 369
++ + +A A N++N Y V FLR N
Sbjct: 258 ILFNQRDLDGALAAFQQAAVANSNYANAY--------------------YGAGVVFLRQN 297
Query: 370 DVSQAVDVLKSCDEMTSS 387
S A++VL+ ++ +S
Sbjct: 298 RFSDALEVLQYARDLYNS 315
>gi|449451161|ref|XP_004143330.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Cucumis
sativus]
Length = 920
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A + ++A D +Y AA +LG
Sbjct: 112 DPQNACAFTHCGILYKEEGRLVEAAESYQKALRVDPSYRPAAECLAVVLTDLGTSLKLSG 171
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ G + Y AL D A YNLG+ + + +Y +L C+ K P E +
Sbjct: 172 NSQDGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAFERPMYAEAYCNM 231
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 232 GVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 281
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G++ Q
Sbjct: 230 NMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYY 289
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
+ A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 290 KRALYYNWHYADAMYNLGVAYGEMLKFDTAIVFYELAFHFNPHCAEACNNLGVIYKDQDN 349
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ +I P+ + L + +Y + G ++ A+ + E +L
Sbjct: 350 LDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIL 396
>gi|402218970|gb|EJT99045.1| hypothetical protein DACRYDRAFT_24125 [Dacryopinax sp. DJM-731 SS1]
Length = 1347
Score = 45.4 bits (106), Expect = 0.047, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKL-----QAIVPSMPEVLYQIASLYEITGDVEQASD 289
E + LG+ +K +++ SLECF ++ Q + PS ++L+QI +YE GD ++A
Sbjct: 289 EVYFRLGVIYKQQHKHDQSLECFQRIAEDPPQPLRPS--DILFQIGHVYEQKGDYDRARS 346
Query: 290 VNENLLLE 297
E +LL+
Sbjct: 347 AYERVLLD 354
Score = 40.8 bits (94), Expect = 1.5, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ ++ LG MA E Y K E Y A+ D ++G+ + + ++ D+L+
Sbjct: 397 DESDAQSWYLLGRAYMAAEKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQIQQFRDALD 456
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + I P + EV + + LYE
Sbjct: 457 AYSRAIRINPYISEVWFDLGCLYE 480
>gi|395537821|ref|XP_003770888.1| PREDICTED: transmembrane and TPR repeat-containing protein 1,
partial [Sarcophilus harrisii]
Length = 717
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 129 AHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKM 188
A+SSLA L + F + +V QA +K+C E +S N G E A
Sbjct: 129 AYSSLASLLAEQE--LFQKAEEVYQAG--IKNCPE-SSDLHNNYGVFLVDTGTPESAIYH 183
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
++A ++ A VNLG + + + +E Y ALD T E L LG + +
Sbjct: 184 YQQAIQLSPHHHVAMVNLGRLYRSLGENKEAEEWYKRALDITQTA-EILSPLGALYYNTG 242
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLE 297
Y ++L+ + + A+ PS E+ +A + + G E+A + +++ E
Sbjct: 243 RYEEALQIYREAAALQPSAKEIQLALAQVLAMMGQTEEAEKMTNHIVSE 291
>gi|196231762|ref|ZP_03130619.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196224234|gb|EDY18747.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 873
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYN 199
N V+ R++D + + L S + + A LS + Q V+++ + A+EA D N
Sbjct: 324 NGLVSVGRLDDAEKTLTGLISANPKDAHALAALSNLRLKQKRVDESNRYAKEALAIDPQN 383
Query: 200 SAAFVNLGN-CAMARE--DYVKGKELYVH-ALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
A + LGN C A + + ++ Y H AL D+ A +GLA +H N ++++
Sbjct: 384 VVALLTLGNNCNTANQPDEAIR----YAHQALAADSGNWRAWGVIGLAEEHRNRSAEAVA 439
Query: 256 CFHKLQAIVP 265
+ K+ + P
Sbjct: 440 AYKKITELAP 449
>gi|443322690|ref|ZP_21051707.1| tetratricopeptide repeat protein [Gloeocapsa sp. PCC 73106]
gi|442787557|gb|ELR97273.1| tetratricopeptide repeat protein [Gloeocapsa sp. PCC 73106]
Length = 173
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLEC 256
A+ G A A +Y + + Y AL ND + I LYN+GL H E+ LE
Sbjct: 37 AYYRDGMSAQAEGEYAEALQNYEEALKLEENANDRSYI--LYNIGLIHTSNGEHERGLEY 94
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGD 283
+H+ + P MP+ L IA +Y G+
Sbjct: 95 YHQAIELNPQMPQALNNIAVVYHYQGE 121
>gi|428220949|ref|YP_007105119.1| hypothetical protein Syn7502_00853 [Synechococcus sp. PCC 7502]
gi|427994289|gb|AFY72984.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
Length = 170
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
A+ G A +Y + E Y AL +N LYN+GL H ++ +LE +H
Sbjct: 37 AYYRDGMSAQGDGEYAEALENYEEALKLEENPYDRSYILYNIGLIHASNGDHDKALEYYH 96
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEA 298
+ I P +P+ L IA +Y G+ + D E+ +A
Sbjct: 97 QAIDINPRLPQALNNIAVIYHYKGEKSETEDDREDFFTKA 136
>gi|320581103|gb|EFW95325.1| General transcriptional co-repressor [Ogataea parapolymorpha DL-1]
Length = 860
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 53/95 (55%)
Query: 185 AEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAH 244
A+++ ++ + ++ ++ LG M+++DY E + HA++ D+ ++G+ +
Sbjct: 269 AQQLLRQSIELNNADAHSWYYLGRVYMSKQDYPNAYEAFQHAVNIDSRNPTFWCSIGVLY 328
Query: 245 KHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+++Y D+L+ + + + P + EV Y + +LYE
Sbjct: 329 YKISQYKDALDAYTRAIRLNPYLSEVWYDLGTLYE 363
>gi|301772642|ref|XP_002921741.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like
[Ailuropoda melanoleuca]
gi|281353406|gb|EFB28990.1| hypothetical protein PANDA_010649 [Ailuropoda melanoleuca]
Length = 915
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|417907810|ref|ZP_12551577.1| tetratricopeptide repeat protein [Staphylococcus capitis VCU116]
gi|341594897|gb|EGS37575.1| tetratricopeptide repeat protein [Staphylococcus capitis VCU116]
Length = 222
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E+AE+ ++A T D N A + NL N + + + +LY AL N+ ++ Y
Sbjct: 48 GEIEKAERFFQKAITIDPSNGAVYYNLANVYYNQGRFKEAIKLYQKALKNNVATVDCNYM 107
Query: 240 LGLAHKHLNEYSDSL 254
+G++ L + ++L
Sbjct: 108 IGMSFNQLEAFKEAL 122
>gi|223044120|ref|ZP_03614159.1| TPR domain protein [Staphylococcus capitis SK14]
gi|222442514|gb|EEE48620.1| TPR domain protein [Staphylococcus capitis SK14]
Length = 223
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E+AE+ ++A T D N A + NL N + + + +LY AL N+ ++ Y
Sbjct: 49 GEIEKAERFFQKAITIDPSNGAVYYNLANVYYNQGRFKEAIKLYQKALKNNVATVDCNYM 108
Query: 240 LGLAHKHLNEYSDSL 254
+G++ L + ++L
Sbjct: 109 IGMSFNQLEAFKEAL 123
>gi|302307175|ref|NP_983751.2| ADL344Wp [Ashbya gossypii ATCC 10895]
gi|299788873|gb|AAS51575.2| ADL344Wp [Ashbya gossypii ATCC 10895]
Length = 910
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 46/86 (53%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD+ ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 307 ADSTDATTWYHLGRIHMVRNDYTAAYDAFQQAVNRDSRNPTFWCSIGVLYYQISQYRDAL 366
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEI 280
+ + + + P + EV Y + +LYE
Sbjct: 367 DAYTRAIRLNPYISEVWYDLGTLYET 392
>gi|314933787|ref|ZP_07841152.1| tetratricopeptide repeat protein [Staphylococcus caprae C87]
gi|313653937|gb|EFS17694.1| tetratricopeptide repeat protein [Staphylococcus caprae C87]
Length = 223
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E+AE+ ++A T D N A + NL N + + + +LY AL N+ ++ Y
Sbjct: 49 GEIEKAERFFQKAITIDPSNGAVYYNLANVYYNQGRFKEAIKLYQKALKNNVATVDCNYM 108
Query: 240 LGLAHKHLNEYSDSL 254
+G++ L + ++L
Sbjct: 109 IGMSFNQLEAFKEAL 123
>gi|224123642|ref|XP_002319130.1| predicted protein [Populus trichocarpa]
gi|222857506|gb|EEE95053.1| predicted protein [Populus trichocarpa]
Length = 923
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 14/220 (6%)
Query: 72 RKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC-VQSIRNSAH 130
R A A N A + + + +EA +C A + P + D SN N Q + A+
Sbjct: 100 RPNFADAWSNLASAYMRKGRLNEASQCC-RQALTLNPHLVDAHSNLGNLMKAQGLVQEAY 158
Query: 131 SSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFL 178
S + L I N A F+ D+++A+ K ++ A NL +Y
Sbjct: 159 SCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKA 218
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G ++A ++A A + AF NL + R Y A+ D +EA
Sbjct: 219 LGMPQEAIVCYQQAVQARPKYAMAFGNLASTYYERGQLDLAILHYKQAIACDQRFLEAYN 278
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
NLG A K + ++++C+++ ++ P+ P+ L + ++Y
Sbjct: 279 NLGNALKDVGRVDEAIQCYNQCLSLQPNHPQALTNLGNIY 318
>gi|328701581|ref|XP_003241648.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
[Acyrthosiphon pisum]
Length = 975
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 145 FLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQ------GEVEQAEKMAEEACTADTY 198
FL++ + +A + ++ S L + L+ G+++ M +A T DT
Sbjct: 5 FLKLGNAEKARLAFERAIQLDSKCVGALVGLAILKLNGENPGDIKLGVNMLSKAYTIDTT 64
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKHLNEYSDSLE 255
N +L N ++DY K + L HAL +N+A E+ Y + A N Y + +
Sbjct: 65 NPMVLNHLSNHFFFKKDYTKYELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQ 124
Query: 256 CFHKLQAIVP---SMPEVLYQIASLYEITGDVEQASDVNENLL 295
+++ P +P Y + +Y GD+E A+ E +L
Sbjct: 125 YYYQATQFAPVTFVLPH--YGLGQMYIYGGDMENAAQCFEKVL 165
>gi|374106964|gb|AEY95872.1| FADL344Wp [Ashbya gossypii FDAG1]
Length = 910
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 46/86 (53%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD+ ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 307 ADSTDATTWYHLGRIHMVRNDYTAAYDAFQQAVNRDSRNPTFWCSIGVLYYQISQYRDAL 366
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEI 280
+ + + + P + EV Y + +LYE
Sbjct: 367 DAYTRAIRLNPYISEVWYDLGTLYET 392
>gi|449526080|ref|XP_004170042.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Cucumis
sativus]
Length = 925
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A + ++A D +Y AA +LG
Sbjct: 112 DPQNACAFTHCGILYKEEGRLVEAAESYQKALRVDPSYRPAAECLAVVLTDLGTSLKLSG 171
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ G + Y AL D A YNLG+ + + +Y +L C+ K P E +
Sbjct: 172 NSQDGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAFERPMYAEAYCNM 231
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 232 GVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 281
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G++ Q
Sbjct: 230 NMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYY 289
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
+ A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 290 KRALYYNWHYADAMYNLGVAYGEMLKFDTAIVFYELAFHFNPHCAEACNNLGVIYKDQDN 349
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL------EAVRNDA 303
++EC+ +I P+ + L + +Y + G ++ A+ + E +L EA N
Sbjct: 350 LDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAYNN-- 407
Query: 304 LSQLHR-----EMKHEA-EKCI 319
L LHR EM +A E+C+
Sbjct: 408 LGVLHRDAGNIEMAVDAYERCL 429
>gi|294655114|ref|XP_457213.2| DEHA2B05808p [Debaryomyces hansenii CBS767]
gi|199429701|emb|CAG85208.2| DEHA2B05808p [Debaryomyces hansenii CBS767]
Length = 345
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATC 233
F E ++A K+ +A D+ N + N C + +D+ + L N +T
Sbjct: 39 FANKEFKKAAKIYRDAIKLDSTNPVLYSNRALCFIKEQDWDRALRDCKGGLSLSPNVSTK 98
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
++ +Y G+AHK+LN+ S ++ECF + I P
Sbjct: 99 VKLIYRQGIAHKNLNDISHAIECFKQAVKIDP 130
>gi|325105744|ref|YP_004275398.1| hypothetical protein [Pedobacter saltans DSM 12145]
gi|324974592|gb|ADY53576.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
saltans DSM 12145]
Length = 468
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 100 LTSAKLIAPSIEDNFS---------NGYNWCVQSIRNS-AHSSLAQDLEINKAVTFLRMN 149
L A+L+ PS D F Y+ ++++ + H+ + +++ + A + +
Sbjct: 92 LNKAELLEPSDSDIFLLRGNIYENLGRYDEALEALFKALEHTDMQEEVLMQIAYVYQNLG 151
Query: 150 DVSQAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
D QA++ LK C + A L+F Y + + +++ + ++ + Y+ AA+ NL
Sbjct: 152 DYEQAIEYLKRCLQKNMENQDALYELAFCYDVLDKQDESIQFYQQYIDNEPYSYAAWYNL 211
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
GN E + K + Y +AL A +N G LN++ +++E F Q
Sbjct: 212 GNAYHKYEMFEKAIDAYDYALLIKEDFSSAYFNKGNTLIQLNKFEEAIEVFK--QTFDYE 269
Query: 267 MPE 269
MP+
Sbjct: 270 MPD 272
>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1122
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 92 KHEAEKCILTSAKLIA--PSIEDNFSN----GYN--------WCVQSIRNSAHSSLAQDL 137
+ + E I+ K I P+ DN++N YN W Q +++ S +
Sbjct: 474 QQKQEDAIIWYDKAIQLNPNFGDNYNNLGLQYYNQKQFDQALWYFQ--KSAEKSKNLVNA 531
Query: 138 EINKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
+N+ + + +N +A+ + D S A NL+ IY+ + ++++ + + A
Sbjct: 532 YVNQGLCYQNLNQQDEAIQQYQKAIEVDPNFSDAHYNLALIYYDKKLMKESIEQYQIAID 591
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+ A+ N+G + + Y + + Y +A+ A A+YNLG+ + L +Y +SL
Sbjct: 592 VKPSSYDAYYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAIYNLGVTYYDLGQYEESL 651
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+ + + + P ++ Y YE +A D
Sbjct: 652 KYYSQAYDLNPDFVDICYSTGLSYEKLNKYPEALD 686
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 120 WCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIY 176
W ++SI+ + + D N + + + +A+ + K E+ S A N S Y
Sbjct: 823 WYLKSIQLNPNYC---DAYFNLGIVYYEEQNYEEAIQMYKKSFELDSKFADACYNTSITY 879
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
+ EQ +E+A D + LG ++ K ++Y+ +D A
Sbjct: 880 DKLNDSEQCIYWSEKAIEIDPKCIDTYKFLGQIFSKLDNNEKALKIYLKLVDLLPDDENA 939
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
LYNLG+ ++ L+ Y++++E F K I P+ ++LY + +Y
Sbjct: 940 LYNLGITYQLLHMYNEAIEVFEKGYKINPNQCDLLYNLGLIY 981
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 10/164 (6%)
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEE 191
+D N + + + + +A+ DE+ S + NL Y+ + E+E+A+K +
Sbjct: 767 EDAHFNLGLCYYKQKNYDEAIREYLIADELKPNQSDLSYNLGITYYYRKELEEAKKWYLK 826
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYS 251
+ + A+ NLG ++Y + ++Y + + D+ +A YN + + LN
Sbjct: 827 SIQLNPNYCDAYFNLGIVYYEEQNYEEAIQMYKKSFELDSKFADACYNTSITYDKLN--- 883
Query: 252 DSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
DS +C + + + P+ + Y+ G + D NE L
Sbjct: 884 DSEQCIYWSEKAIEIDPKCI----DTYKFLGQIFSKLDNNEKAL 923
>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 222
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
++A N+ Y+ G + +A + + + D ++AA+ N+G + K +E +
Sbjct: 104 AAAWNNMGLAYYESGNMGKAIECYRKCVSIDEEHAAAWYNMGLAYYESGRFNKAEESFKK 163
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
AL+ D + ++ L NLG+ + L +Y ++ECF+++ I P Y + L
Sbjct: 164 ALELDES-VDTLNNLGIVYGKLRQYEMAMECFNRILEIDPENSAATYNLLIL 214
>gi|434402232|ref|YP_007145117.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428256487|gb|AFZ22437.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 537
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
+A +N I+++ G+ A ++A + + A+ N GN A EDY Y +
Sbjct: 112 AAYSNRGNIFYILGKYSDAIADYDQAIRLNPNFAPAYHNRGNTRYALEDYPGAIADYNRS 171
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
L+ + EA Y+ GL HL +Y ++ F+ + P + Y+ +Y GD ++
Sbjct: 172 LEINPNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSALGDDQK 231
Query: 287 A-SDVN----ENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGY 338
A +D N EN L V + HR ++ I S +L+ + N + GY
Sbjct: 232 AIADYNQALQENPTLALVYGFRANARHRLGDYQG--AIADSNRLL--QLNPNLAEGY 284
>gi|57096757|ref|XP_532644.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Canis
lupus familiaris]
Length = 915
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALDLNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|75318818|sp|O82039.1|SPY_PETHY RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; AltName:
Full=PhSPY
gi|3319682|emb|CAA76834.1| SPINDLY protein [Petunia x hybrida]
Length = 932
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A + ++A AD +Y AA ++G
Sbjct: 112 DPQNACALTHCGILYKDEGRLVEAAESYQKALKADPSYKPAAECLAIVLTDIGTSLKLAG 171
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ +G + Y A+ D+ A YNLG+ + + +Y +L C+ K P E +
Sbjct: 172 NSQEGIQKYYEAIKIDSHYAPAYYNLGVVYSEMMQYDMALNCYEKAAIERPMYAEAYCNM 231
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 232 GVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 281
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G++ Q
Sbjct: 230 NMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYY 289
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 290 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN 349
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ I P+ + L + +Y + G ++ A+ + E ++
Sbjct: 350 LDKAVECYQMALTIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAII 396
>gi|338814927|ref|ZP_08626892.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
gi|337273094|gb|EGO61766.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
Length = 525
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
Y++ G+ EQA A D+ ++ A++ GN R YV+ + ++ DA
Sbjct: 42 FYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYVEAIADFTRSIQLDAANP 101
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQ 273
+A Y+ GLA + Y +L F+K+ A+ E YQ
Sbjct: 102 KAFYSRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQ 140
>gi|440794162|gb|ELR15333.1| udpn-acetylglucosamine--peptide n-acetylglucosaminyltransferase
spindly, putative [Acanthamoeba castellanii str. Neff]
Length = 459
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
QG+ +A + ++A T + + A+ NLG Y K Y A+ + C EA
Sbjct: 191 QGKRVEAVQYYQKALTYNVQYADAYYNLGVAYGEMGSYDKAVICYELAIHFNPFCCEAFN 250
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
NLG+ +K + ++EC+ I P+ + L + +Y + G +++A
Sbjct: 251 NLGVIYKDRDNLEKAIECYRSALGINPTFSQTLNNLGVVYTVQGKLDEA 299
>gi|383791819|ref|YP_005476393.1| Tfp pilus assembly protein PilF [Spirochaeta africana DSM 8902]
gi|383108353|gb|AFG38686.1| Tfp pilus assembly protein PilF [Spirochaeta africana DSM 8902]
Length = 1107
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A NL +Y G+ +A +M E D + NLG + ++ +V AL
Sbjct: 141 AYNNLGTLYEHSGQHPEAVRMLEAGLEHDENHPTLRYNLGISQLELGRLEDARDSFVRAL 200
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ ++AL NLG+ + L EY ++ F ++ +I P L IAS+ G E+A
Sbjct: 201 RSRPGWVDALNNLGIVLQRLEEYEEAQRVFEEILSIESENPRALNNIASILSHLGKYEEA 260
Query: 288 SD 289
+
Sbjct: 261 GE 262
>gi|332800529|ref|YP_004462028.1| hypothetical protein TepRe1_2623 [Tepidanaerobacter acetatoxydans
Re1]
gi|332698264|gb|AEE92721.1| Tetratricopeptide TPR_1 repeat-containing protein
[Tepidanaerobacter acetatoxydans Re1]
Length = 175
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+GE +QA K+ E D N+ A+ LG ++ E+ + K ++ AL+ + A
Sbjct: 14 RGEYQQARKIYNEILLIDPNNAIAYNKLGVISVREENLEQAKIYFIKALELNPKLSSASS 73
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
NLG + + + +C+ K AI P P +A +Y+ + D+++
Sbjct: 74 NLGNIYFEKGNFEKAKDCYEKAIAIDPDNPVPYNNLAVIYKKSKDIDK 121
>gi|242081821|ref|XP_002445679.1| hypothetical protein SORBIDRAFT_07g024110 [Sorghum bicolor]
gi|241942029|gb|EES15174.1| hypothetical protein SORBIDRAFT_07g024110 [Sorghum bicolor]
Length = 910
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 139 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
I K + N QA++ + + A T+ IY +G + +A + ++A TA
Sbjct: 72 IGKGICLQAQNLPRQAIECFTEVVKIEPGNACALTHCGMIYKDEGHLVEAAEAYQKARTA 131
Query: 196 D-TYNSAA------FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
D +Y A+ +LG + +G + Y AL+ D A YNLG+ + +
Sbjct: 132 DPSYKPASELLAIVLTDLGTSLKLAGNTEEGIQKYCEALEVDNHYAPAYYNLGVVYSEMM 191
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND- 302
++ +L C+ K P E + +Y+ GD+E A E L E +N+
Sbjct: 192 QFEMALSCYEKAALERPLYAEAYCNMGVIYKNRGDLEAAIACYERCLTISPNFEIAKNNM 251
Query: 303 --ALSQLHREMKHEAE 316
AL+ L ++K E +
Sbjct: 252 AIALTDLGTKVKIEGD 267
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 24/202 (11%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L ++G++ Q
Sbjct: 216 NMGVIYKNRGDLEAAIACYERCLTISPNFEIAKNNMAIALTDLGTKVKIEGDINQGVAYY 275
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG ++ Y AL + C EA NLG+ +K +
Sbjct: 276 KKALFYNWHYADAMYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDN 335
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL------LEAVRNDA 303
++EC+ +I P + L + +Y + G ++ A+ + E + EA N
Sbjct: 336 LDKAVECYQMALSIKPLFAQSLNNLGVVYTVQGKMDSAASMIEKAIHANPTYAEAYNN-- 393
Query: 304 LSQLHREMK------HEAEKCI 319
L L+R+ H E+C+
Sbjct: 394 LGVLYRDAGSITLAIHAYERCL 415
>gi|406951596|gb|EKD81486.1| hypothetical protein ACD_39C01785G0001, partial [uncultured
bacterium]
Length = 387
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 150 DVSQAVDVLKSCDEMTS------SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAF 203
+ S+ ++ ++S +E+ +A NL +Y + GE ++A + + D N A
Sbjct: 188 ETSRYLEAVRSYEEVLKQEPAHINALNNLGLVYSILGEKDRAIDLFNQVLKIDNGNIKAR 247
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI 263
+NLGN ++ D V+ +++Y A+ D + I NLG+ + +++++ + L
Sbjct: 248 INLGNVFLSTRDLVEAEKIYRSAISLDQSDISPRLNLGVVYYEKGDFANARAEWDNLLKE 307
Query: 264 VPSMPEVLYQIASLY 278
P VL + S Y
Sbjct: 308 NPDNVRVLSVMGSAY 322
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 159 KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVK 218
KS D + A L IY +G E+AE M + A + A NLG + ++ + +
Sbjct: 66 KSIDPYSEQAYNFLGLIYLQEGLFEKAEDMLKRAVAIEPMYPEALRNLGKLYLRQDRFDE 125
Query: 219 GKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP-EVLYQIASL 277
L D Y LG+A + ++S+ + ++ P++P E Y +
Sbjct: 126 ATTYLRRTLALDVNQPYTWYLLGMAQYFSGKITESITSYENAFSMEPNLPVEAHYNLGVA 185
Query: 278 YEIT 281
Y T
Sbjct: 186 YHET 189
>gi|45357839|ref|NP_987396.1| hypothetical protein MMP0276 [Methanococcus maripaludis S2]
gi|45047399|emb|CAF29832.1| Conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 344
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A D NS AF LG +Y K E+Y +L+ D+ EA N G+ ++
Sbjct: 83 DKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQR 142
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD-VNENLLLEAVRNDAL---- 304
YS++++CF K +I +V Y G+ E++ D N+ LL++ AL
Sbjct: 143 YSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKG 202
Query: 305 -SQLHREMKHEAEKCILTSAKLIAPSIE 331
S L + A +C +A+ I P E
Sbjct: 203 NSYLKLQNYESAIEC-FNTAETINPKSE 229
>gi|392572052|gb|EIW65224.1| TPR-like protein [Trametes versicolor FP-101664 SS1]
Length = 1161
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q +++A + T A+ ++ ++ LG MA + Y K E Y A+
Sbjct: 271 LGWLYHQDGSSFQNQELAIQYLTKSLEAEPGDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 330
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + I P + EV + + SLYE
Sbjct: 331 YRDGRNPTFWCSIGVLYFQINQYRDALDAYSRAIRINPYISEVWFDLGSLYE 382
>gi|297568709|ref|YP_003690053.1| Methyltransferase type 12 [Desulfurivibrio alkaliphilus AHT2]
gi|296924624|gb|ADH85434.1| Methyltransferase type 12 [Desulfurivibrio alkaliphilus AHT2]
Length = 469
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+GE E A +A + A+ NLG + R + E Y AL ++ LY
Sbjct: 92 RGEDELAIDFYRQALALKPEHHRAWYNLGTARLQRGEEALAVEAYQEALHLAPNDVDTLY 151
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
NL LA L ++S + +H+ A P EVLY + LY
Sbjct: 152 NLALALTRLEKFSAAAHIYHRALAAAPDDREVLYNLGVLY 191
>gi|406592975|ref|YP_006740154.1| hypothetical protein B712_0060 [Chlamydia psittaci NJ1]
gi|405788847|gb|AFS27589.1| tetratricopeptide repeat family protein [Chlamydia psittaci NJ1]
Length = 335
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAEQRLKETLEIDPTAALAYCYLGIIALESGRTSEALTWCTKGLESEPGDSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y++++ECF K+
Sbjct: 79 LRYCYGVALDRDNRCEEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKIL 138
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ LY A
Sbjct: 139 ELDPWNPQSLYNKA 152
>gi|357142312|ref|XP_003572530.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 1001
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY V A + A + + S+ NL
Sbjct: 365 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNLVTTAASFYKAAISVTSGLSSPLNNLA 424
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D T +AL N G K + +++++ + + I P+M
Sbjct: 425 LIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPTM 484
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 485 AEAHANLASAYKDSGHVETA 504
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 48/127 (37%)
Query: 161 CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
CD A N+ G VE+A + A NLGN M
Sbjct: 344 CDPQFIEAYNNMGNALKDSGRVEEAINCYRSCLALQANHPQALTNLGNIYMEWNLVTTAA 403
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
Y A+ + L NL L +K Y+D++ C+ ++ I P+ + L + ++
Sbjct: 404 SFYKAAISVTSGLSSPLNNLALIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKE 463
Query: 281 TGDVEQA 287
G V +A
Sbjct: 464 IGRVNEA 470
>gi|4028023|gb|AAC96110.1| unknown [Desulfotomaculum thermocisternum]
Length = 224
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 151 VSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCA 210
V + V++L+S + ++A NL + QG +E+A+ + EEA T A+VNLG
Sbjct: 11 VERQVNMLQS-NPGCATAKYNLGVMLMEQGRLEEAKTLFEEAIADGTRMFEAYVNLGYIY 69
Query: 211 MAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEV 270
+ + K +E A+ + NLG + + + +++E K + P + +
Sbjct: 70 FKQGNLEKVEECNRLAVQIEPRYARGYANLGFVYLQMEKPDEAIEVLQKAIELNPRIIQA 129
Query: 271 LYQIASLYEITGDVEQASDVNENLL 295
+A+ Y GD+++A + N +L
Sbjct: 130 WCNLANAYLQKGDLDRALETNLKML 154
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A NL +IYF QG +E+ E+ A + + + NLG + E + E+ A+
Sbjct: 61 AYVNLGYIYFKQGNLEKVEECNRLAVQIEPRYARGYANLGFVYLQMEKPDEAIEVLQKAI 120
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + I+A NL A+ + +LE K+ I P +A +Y + GD+ +A
Sbjct: 121 ELNPRIIQAWCNLANAYLQKGDLDRALETNLKMLEIAPDFSLGHNNLAYVYYLKGDMNRA 180
Query: 288 SD 289
++
Sbjct: 181 AE 182
>gi|395802327|ref|ZP_10481580.1| hypothetical protein FF52_10633 [Flavobacterium sp. F52]
gi|395435568|gb|EJG01509.1| hypothetical protein FF52_10633 [Flavobacterium sp. F52]
Length = 256
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 166 SSAATNLSFIYFLQGEVEQAE----KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
S+AA NL + Q ++ +A+ K + A T A+ NLGN M +DY + E
Sbjct: 55 SAAAYNLGNTIYRQNQISEAKYAYAKAIKNAKTRPE-KHKAYHNLGNTFMKEKDYTQAVE 113
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNE 249
Y AL ND T E YN A + L E
Sbjct: 114 AYKQALRNDPTDEETRYNYAYAKQKLKE 141
>gi|222622881|gb|EEE57013.1| hypothetical protein OsJ_06783 [Oryza sativa Japonica Group]
Length = 1004
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY + A + A + + S+ NL
Sbjct: 366 VKEAINCYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLA 425
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D T +AL N G K + +++++ + + I P+M
Sbjct: 426 VIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTM 485
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 486 AEAHANLASAYKDSGHVETA 505
>gi|225440809|ref|XP_002281883.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Vitis vinifera]
gi|297740152|emb|CBI30334.3| unnamed protein product [Vitis vinifera]
Length = 914
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT-YNSAA------FVNLGNCAMARE 214
D A T+L +Y +G + +A + ++A D+ Y AA +LG
Sbjct: 110 DPQNLCALTHLGILYKDEGRLLEAAESYDKALRIDSSYKPAAECLAIVLTDLGTSLKLAG 169
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ +G + Y AL D A YNLG+ + + +Y +L C+ K P E +
Sbjct: 170 NTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAALERPMYAEAYCNM 229
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+++ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 230 GVIFKNRGDLESAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 279
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V F D+ A+ + C ++ + A T+L L+G++ Q
Sbjct: 228 NMGVIFKNRGDLESAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYY 287
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 288 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN 347
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ +I P+ + L + +Y + G ++ A+ + E ++
Sbjct: 348 LDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIV 394
>gi|386813826|ref|ZP_10101050.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403323|dbj|GAB63931.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 346
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 22/226 (9%)
Query: 111 EDNFSNGYNWCVQSIRNSAHSSLAQDLEIN---------KAVTFLRMNDVSQAVDVLKSC 161
+D F+ G + Q A S ++ EI KA+ + ++ ++ LK
Sbjct: 110 QDFFNEGLEYFNQGQFEEAIESFSKATEIESTMVEAYRLKALAYSKLGKTNETAISLKKI 169
Query: 162 ---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVK 218
D S A NL Y +G + A E + + N+ + NLG ++ K
Sbjct: 170 VELDSKDSGANLNLGIFYAKKGMTDDAITAFERSISLSPNNAKVYYNLGCLYNKKKLTDK 229
Query: 219 GKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
Y A+ D A YNLG+ + + +Y D+++ F ++ + E Y + Y
Sbjct: 230 AITAYQRAVKIDPNYANAYYNLGVIYNNKQKYDDAIKTFKRVLTLDAEHHEARYNLGFAY 289
Query: 279 EITGDVEQASDVNENLLLEAVRN--------DALSQL--HREMKHE 314
G +A E LL + N D+ S+L H+E K E
Sbjct: 290 NQKGLYNEAIATCEKLLELSPGNAHAHLLLGDSYSKLGKHKEAKEE 335
>gi|401882494|gb|EJT46752.1| general transcriptional repressor [Trichosporon asahii var. asahii
CBS 2479]
Length = 608
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 121 CVQSIRNSAHSSL-AQDLEINKAVTFLRMNDVSQAVDV-LKSCDEMTSSAAT--NLSFIY 176
C + I N+ L + D+ + D + A D L+ D A L ++Y
Sbjct: 282 CFRYIINNPPRPLTSWDIWFQLGHVYELNGDFTAARDAYLRVLDHQPDHAKVLQQLGWLY 341
Query: 177 FLQGEV----EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
G EQA ++ D ++ ++ LG MA + Y K E Y A+ +
Sbjct: 342 HQPGASFANQEQAVNYLTKSLETDAADAQSWYLLGRALMAGQRYNKAYEAYQQAVYREGR 401
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++G+ + +N++ D+L+ + + + P M +V Y + SLYE
Sbjct: 402 NPSFWCSIGVLYFQINQFRDALDAYSRAIRLNPYMWQVWYNLGSLYE 448
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIV--PSMP----EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH +YS SL+CF + I+ P P ++ +Q+ +YE+ GD A
Sbjct: 261 EIYFRLGIIYKHQRKYSASLDCF---RYIINNPPRPLTSWDIWFQLGHVYELNGDFTAAR 317
Query: 289 DV 290
D
Sbjct: 318 DA 319
>gi|60219539|emb|CAI56780.1| hypothetical protein [Homo sapiens]
Length = 430
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 58 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 117
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 118 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 174
>gi|224144666|ref|XP_002325368.1| predicted protein [Populus trichocarpa]
gi|222862243|gb|EEE99749.1| predicted protein [Populus trichocarpa]
Length = 873
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 14/220 (6%)
Query: 72 RKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC-VQSIRNSAH 130
R A A N A + + + +EA +C A + P + D SN N Q + A+
Sbjct: 47 RPNFADAWSNLASAYMRKGRLNEASQCC-RQALALNPLLVDAHSNLGNLMKAQGLVQEAY 105
Query: 131 SSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFL 178
S + L I N A F+ D+++A+ K ++ A NL +Y
Sbjct: 106 SCYLEALRIQPSFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKA 165
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G ++A + A + AF NL + R Y A+ D +EA
Sbjct: 166 LGMPQEAIMCYQRAVQTRPNYAMAFGNLASTCYERGQVELAILHYKQAIACDQRFLEAYN 225
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
NLG A K + ++L+C+++ +I P+ P+ L + ++Y
Sbjct: 226 NLGNALKDVGRVDEALQCYNQCLSIQPNHPQALTNLGNIY 265
>gi|428213218|ref|YP_007086362.1| hypothetical protein Oscil6304_2840 [Oscillatoria acuminata PCC
6304]
gi|428001599|gb|AFY82442.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 173
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLEC 256
A+ G A A +Y + E Y AL D + I LYN+GL H + +LE
Sbjct: 37 AYYRDGMSAQADGEYAEALENYTEALSLEEDPYDRSYI--LYNIGLIHTSNGDRDKALEF 94
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNE 292
+H+ + P MP+ L IA ++ GD QA D E
Sbjct: 95 YHQALELNPRMPQALNNIAVIFHYQGD--QAKDAGE 128
>gi|429197996|ref|ZP_19189855.1| tetratricopeptide repeat protein [Streptomyces ipomoeae 91-03]
gi|428666305|gb|EKX65469.1| tetratricopeptide repeat protein [Streptomyces ipomoeae 91-03]
Length = 540
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 170 TNLSFIYFLQGEVEQAEKMAEEA-CTADTYNSAAFV--NLGNCAMAREDYVKGKELYVHA 226
T +++Y L+G+V+ A ++ E+A +A T A+V LG A + ++ + Y A
Sbjct: 283 TRYAYVYELRGDVKTARRVLEQALASAVTRGDIAYVATQLGQLAWKQGEFKTALDHYARA 342
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
L D T + AL A + ++++ ++ + P +P L + LYE GD
Sbjct: 343 LGADDTYLPALDGRARAQAASGDRAEAIRGLEQVVSTYP-LPGPLVALGELYEAEGD 398
>gi|302339630|ref|YP_003804836.1| hypothetical protein Spirs_3144 [Spirochaeta smaragdinae DSM 11293]
gi|301636815|gb|ADK82242.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 384
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEA--CTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
A L +++ E EQA + E ++ + +LGNC + Y +G E +
Sbjct: 168 ALIGLGHLHYDFREYEQALQYWERMLQVKKESVDIRVLTSLGNCHRKLKTYAQGLEYFHK 227
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
AL+ + AL+ + ++ ++ ++DSLE +H++ + P +L + Y GD +
Sbjct: 228 ALELEPQNFYALFGMADCYRGMDHHADSLEYWHRILKLDPHNKVILTRAGDAYRCMGDYD 287
Query: 286 QASD 289
A +
Sbjct: 288 NAEE 291
>gi|118357157|ref|XP_001011828.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89293595|gb|EAR91583.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 494
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 156 DVLKSCDEM--TSSAATNLSFIYFLQGEV-------EQAEKMAEEACTADTYNSAAFVNL 206
D L++ +E+ ++ +N+ +IY G + +QA K ++A + + A +NL
Sbjct: 18 DALQTFNELLQINTFKSNVPYIYNTIGSIYEQQNMKDQAIKQYQKALENEPSDYEALINL 77
Query: 207 GNCAMAREDYVK-GKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
GN ++ VK E ALD + C Y + + N+ +++ + K +I P
Sbjct: 78 GNLYFFDKNMVKEANECIKKALDLNPNCFFTWYKAAKFYDNSNQNQEAIYNYKKALSIFP 137
Query: 266 SMPEVLYQIASLYEITGDVEQASDVNENLL 295
E+LY +A +Y G+ ++A E ++
Sbjct: 138 RDSEILYSLAQIYHKIGNNQEAIKFEEKVI 167
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEA-----CTADTYNSAAFV--NLGNCAMAREDYVK 218
S NL F Y+L+G+ +A +++ DT+N+ + N G A + YVK
Sbjct: 344 SYILNNLGFAYYLEGDYSKAISYYQQSQEINPNVYDTFNNLGLIYQNQGFAEQAIQQYVK 403
Query: 219 GKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
++ L N A EAL NLG + + E+ ++ + + Q P E + +Y
Sbjct: 404 A----INILPNFA---EALNNLGSIYFQIGEFGTAIYYYMEAQEADPQFLEPYKSLGYIY 456
Query: 279 EITGDVEQASDV 290
+ G VE+A+++
Sbjct: 457 KKIGQVEEANNI 468
>gi|358412129|ref|XP_600406.6| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Bos
taurus]
gi|359065212|ref|XP_002687234.2| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Bos
taurus]
Length = 918
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + K KE Y+ AL+ D + Y
Sbjct: 545 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPAKAKEAYLKALELDRNNADLWY 604
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +D+L+ F+ + P L+ A L + +G+V + + LL
Sbjct: 605 NLAIVHIELKEPNDALKNFNHALELNPKHKLALFNSAILMQESGEVRLRPEARKRLL 661
>gi|145345890|ref|XP_001417432.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577659|gb|ABO95725.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 209
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N A+ + V +A + +K C S A L+ +Y G+ ++AE E+ D
Sbjct: 104 NLAIVIDSIGSVGEAKEWMKRAVDCRPNDSRATYALALLYVKLGQWKKAEYHFEQTLNLD 163
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
++ + V LGN A R D+ + Y++AL+ D +EAL NL +
Sbjct: 164 AKHAPSQVKLGNLAFRRGDFQRSGANYLNALEVDPGNVEALTNLAM 209
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 164 MTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELY 223
+T+ L I+ QG++ +A + A D ++ A N+GN D + Y
Sbjct: 29 LTAQRQITLGNIFLAQGKLAKASTVYAMAIRRDPVSAVAHFNIGNAHFLAGDAASARVSY 88
Query: 224 VHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
+ ALD + +ALYNL + + ++ E + P+ Y +A LY G
Sbjct: 89 LAALDREPNYFKALYNLAIVIDSIGSVGEAKEWMKRAVDCRPNDSRATYALALLYVKLGQ 148
Query: 284 VEQA 287
++A
Sbjct: 149 WKKA 152
>gi|357148919|ref|XP_003574938.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like
[Brachypodium distachyon]
Length = 959
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 139 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
I K + N QA++ D + A T+ IY +G + +A + ++A +A
Sbjct: 77 IGKGICLQAQNLPKQALECFTEAVKVDPNNACALTHCGMIYKDEGHLVEAAEAYQKARSA 136
Query: 196 D-TYNSAA------FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
D +Y AA +LG + +G + Y AL+ D A YNLG+ + +
Sbjct: 137 DPSYKPAAEFLAIVLTDLGTKLKLAGNTEEGIQKYCEALEVDTHYAPAYYNLGVVYSEMM 196
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND- 302
++ +L C+ K P E + +Y+ GD++ A E L E +N+
Sbjct: 197 QFDVALTCYEKAAIERPLYAEAYCNLGVIYKNRGDLDAAIACYERCLTISPNFEIAKNNM 256
Query: 303 --ALSQLHREMKHEAE 316
AL+ L ++K E +
Sbjct: 257 AIALTDLGTKVKIEGD 272
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L ++G+++Q
Sbjct: 221 NLGVIYKNRGDLDAAIACYERCLTISPNFEIAKNNMAIALTDLGTKVKIEGDIKQGVAYY 280
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG ++ Y AL + C EA NLG+ +K +
Sbjct: 281 KKALFYNWHYADAMYNLGVAYGEMLNFEMAIVSYELALHFNPRCAEACNNLGVIYKDRDN 340
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ I P+ + L + +Y + G ++ A+ + E +L
Sbjct: 341 LDRAVECYQMALTIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIL 387
>gi|228473159|ref|ZP_04057916.1| BatC protein [Capnocytophaga gingivalis ATCC 33624]
gi|228275741|gb|EEK14518.1| BatC protein [Capnocytophaga gingivalis ATCC 33624]
Length = 292
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 129 AHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKM 188
AH L +++ KA++ + N V+Q D + S A N + Y+ + V +
Sbjct: 45 AHKLLDSEMDYRKAISKNKENAVAQ----YNMGDVLYSQEAYNEATHYYQEASVNK---- 96
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHL 247
EA D + AF NLGN AM + Y + + Y AL N+ T + YNL +A + L
Sbjct: 97 --EASKEDKH--KAFHNLGNLAMQNKKYEEAVQFYKEALRNNPTDEQTRYNLAIAKEKL 151
>gi|359409222|ref|ZP_09201690.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675975|gb|EHI48328.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 727
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 127 NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAE 186
N+ ++L D EINKA+ +A+ ++ S +A NL + Q ++AE
Sbjct: 158 NNLGTALLSDGEINKAII-----AYEKAIQLVPS----DPNAHNNLGLCFHYQKRFKEAE 208
Query: 187 KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKH 246
+ EA + + + NLGN + ++++++ + + + D A NLGL
Sbjct: 209 EKYNEALRLNPKSINSLFNLGNVYLEKKNFLRAIQYFGQTIQIDPNAHNAFNNLGLCLAQ 268
Query: 247 LNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ + + +++ + +I P+ V + + + Y E+A + +N L
Sbjct: 269 IGDNTKAIQAYKNSISINPNNSNVHFNLGNAYRDVNRNEKAIESYKNGL 317
>gi|296487992|tpg|DAA30105.1| TPA: CG4050-like [Bos taurus]
gi|440891364|gb|ELR45097.1| Transmembrane and TPR repeat-containing protein 3 [Bos grunniens
mutus]
Length = 915
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPAKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +D+L+ F+ + P L+ A L + +G+V + + LL
Sbjct: 602 NLAIVHIELKEPNDALKNFNHALELNPKHKLALFNSAILMQESGEVRLRPEARKRLL 658
>gi|270210255|gb|ACZ64519.1| IFT88-like protein [Schmidtea mediterranea]
Length = 294
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
YN+GL+ K + + ++L+CF KL AI+ + V+YQIA +Y
Sbjct: 1 YNMGLSEKKMGRFEEALDCFFKLHAILRNNATVIYQIADVY 41
>gi|268317849|ref|YP_003291568.1| hypothetical protein Rmar_2301 [Rhodothermus marinus DSM 4252]
gi|262335383|gb|ACY49180.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 785
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
+ +G ++AE+ EA D A++ + AMARE++ + + AL D++ +
Sbjct: 38 WLARGAYQEAEETYREALELDATYLPAYLGMIRLAMARENWHEASDWAGRALKIDSSSLA 97
Query: 236 ALYNLGLAHKHLNEYSDSLECFHK------LQAIVPS---MPEVLYQIASLYEITGDVEQ 286
Y LG++ + +Y + H+ + ++ +VLYQ A LY GD +
Sbjct: 98 VHYFLGISERERAQYQTPFQFTHRRESRKHFEWVLARDSLYRDVLYQYALLYRQDGDYPR 157
Query: 287 ASDVNE 292
A + E
Sbjct: 158 AITLAE 163
>gi|407460219|ref|YP_006737994.1| hypothetical protein B603_0062 [Chlamydia psittaci WC]
gi|449070692|ref|YP_007437772.1| hypothetical protein AO9_00260 [Chlamydophila psittaci Mat116]
gi|405787267|gb|AFS26011.1| tetratricopeptide repeat family protein [Chlamydia psittaci WC]
gi|449039200|gb|AGE74624.1| hypothetical protein AO9_00260 [Chlamydophila psittaci Mat116]
Length = 335
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAEQRLKETLELDPTAALAYCYLGIIALESGRTSEALTWCTKGLESEPGDSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y++++ECF K+
Sbjct: 79 LRYCYGVALDRDNRCEEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKIL 138
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ LY A
Sbjct: 139 ELDPWNPQSLYNKA 152
>gi|189426401|ref|YP_001953578.1| hypothetical protein Glov_3352 [Geobacter lovleyi SZ]
gi|189422660|gb|ACD97058.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
Length = 404
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 5/174 (2%)
Query: 145 FLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
+ R+ +A+D K D+ + T L+ +Y G+ +AEK+ ++ + N+
Sbjct: 71 YARLGKRKEAIDAYKMSLKVDKTQDTVYTTLAGVYIDNGQKSEAEKVLKDGIKQNNQNTL 130
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A+ LG DY + + + + Y LG+A +Y +++E K
Sbjct: 131 AYYMLGQLQAQNGDYTSAEANFRQVIKLEPKDGNGYYALGMALNGQEKYDEAVEALQKAT 190
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALS--QLHREMKH 313
+ L ++ Y G+ ++A ++ + L A + LS +L E+K
Sbjct: 191 DLKADFSPALLELGRAYAGLGEKDKAQEIVDTLTEIATSDSLLSAEELAAEIKQ 244
>gi|47848089|dbj|BAD21873.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
gi|47848095|dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
Length = 953
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY + A + A + + S+ NL
Sbjct: 366 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLA 425
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D T +AL N G K + +++++ + + I P+M
Sbjct: 426 VIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTM 485
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 486 AEAHANLASAYKDSGHVETA 505
>gi|418618619|ref|ZP_13181484.1| tetratricopeptide repeat protein [Staphylococcus hominis VCU122]
gi|374827379|gb|EHR91242.1| tetratricopeptide repeat protein [Staphylococcus hominis VCU122]
Length = 223
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E+AE+ ++A T D N A + NL N + + + +LY AL + ++A Y
Sbjct: 48 GEIEKAERFFQKAITLDDKNGAVYYNLANLYYEQSRFQEAIKLYQRALKYNMNPVDANYM 107
Query: 240 LGLAHKHLNEYSDSLECF 257
+G++ L+ ++L F
Sbjct: 108 IGMSFSQLDAQREALPFF 125
>gi|328947737|ref|YP_004365074.1| hypothetical protein Tresu_0849 [Treponema succinifaciens DSM 2489]
gi|328448061|gb|AEB13777.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
succinifaciens DSM 2489]
Length = 887
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 139 INKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
+++A + D QA + K D ++L +Y G+ E+A E
Sbjct: 12 LDRANAAILSRDFEQAARIYKGLLKSDPQNIELLSSLGNLYVKSGDDEKALAYFSEIIRI 71
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D+ N A +LG + Y + A+ +D + +++ YNLG K + +Y D+L
Sbjct: 72 DSKNVEALNSLGGIYRRLKKYDDSISVLEQAVISDESNVQSFYNLGFTFKLMGKYDDALN 131
Query: 256 CFHKLQAIVPSMPE---VLYQIASLY 278
CF++ +V PE I S+Y
Sbjct: 132 CFNR---VVEENPEDVLAFNHIGSIY 154
>gi|218190772|gb|EEC73199.1| hypothetical protein OsI_07263 [Oryza sativa Indica Group]
Length = 1004
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY + A + A + + S+ NL
Sbjct: 366 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLA 425
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D T +AL N G K + +++++ + + I P+M
Sbjct: 426 VIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTM 485
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 486 AEAHANLASAYKDSGHVETA 505
>gi|182414769|ref|YP_001819835.1| hypothetical protein Oter_2954 [Opitutus terrae PB90-1]
gi|177841983|gb|ACB76235.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
Length = 1104
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 7/174 (4%)
Query: 120 WCVQSIRNSAHSSLAQDLEI-NKAVTFLRMNDVSQAVDVLKSCDEMTSSAA---TNLSFI 175
W + R+S H++ A+ +++ + L D + A+DV ++ + NL+
Sbjct: 23 WFSPASRSS-HATSAEFMQLMTRGNGLLENGDAAGAIDVYTRALPLSPQSTDVRLNLANA 81
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYV-KGKELYVHALDNDATCI 234
Y L A + D N+AA+ LG CA+ R++ E + + +
Sbjct: 82 YLLAERPMDAAAACRQVLDLDRNNAAAYYLLG-CALLRQNQPEPAAEAFQQSWKIEPGIP 140
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS 288
+ +G+A + L D++ F + P+ P YQ++ LY G E A+
Sbjct: 141 ALDFQMGMAQRELGHLPDAISLFESVVRAEPAHPSAHYQLSQLYRRVGRAEDAT 194
>gi|434396928|ref|YP_007130932.1| serine/threonine protein kinase [Stanieria cyanosphaera PCC 7437]
gi|428268025|gb|AFZ33966.1| serine/threonine protein kinase [Stanieria cyanosphaera PCC 7437]
Length = 854
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSSAA----TNLSFIYFLQGEVEQAEKMAEEACTA 195
N+ + ++ + AV ++ +++ + + NL IYF Q + E+A ++A
Sbjct: 708 NRGEVYTKLGRIDSAVADFQAAVKLSQAESYVPWNNLGKIYFRQQKYEEAINAYQQAIAV 767
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
A + LGN A + Y + Y A++ ++ EA + GL + L +Y ++++
Sbjct: 768 KEDYLPALIGLGNTQKALKQYSQALVAYNKAIEVNSDSYEAWFGKGLVEEALQQYREAIK 827
Query: 256 CFHKLQAIVPSM 267
+ K + P+
Sbjct: 828 AYEKAIVLKPNW 839
>gi|403263901|ref|XP_003924238.1| PREDICTED: tetratricopeptide repeat protein 6-like isoform 1
[Saimiri boliviensis boliviensis]
Length = 617
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 14/227 (6%)
Query: 90 EMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA--HSSLAQDLEI-------N 140
E +A+K L + + I+ GYN +Q A H ++A D++
Sbjct: 358 EATKKAQKDFLKALHINPGYIKARICLGYNLQIQGKFQKAWNHFTIAMDIDPKNYLAYEG 417
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTSSA--ATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+AV L+M + A+ + + ++ ++A TN I+ G + A K +EA + +
Sbjct: 418 RAVVCLQMGNNFAAMQDINAAMKINTTAEFLTNRGVIHEFMGHKQNAMKDYQEAISLNPK 477
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
S A+ N GN + + + + AL D L N +A+ L +Y ++ E F
Sbjct: 478 YSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYVLMNRAIANTILKKYEEAKEDFA 537
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLLEAVRNDAL 304
+ P V + A Y E A D+N+ L L+ NDAL
Sbjct: 538 NVIERCPFWAAVYFNRAHFYYCLKQYELAEEDLNKALSLKP--NDAL 582
>gi|156839553|ref|XP_001643466.1| hypothetical protein Kpol_1006p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156114078|gb|EDO15608.1| hypothetical protein Kpol_1006p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 732
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D+ +S + +LG M R DY E + A++ DA ++G+ + + +Y D+L+
Sbjct: 282 DSEDSTTWYHLGRIHMIRSDYNAAYEAFQQAVNRDARNPIFWCSIGVLYYQIYQYRDALD 341
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 342 AYTRAIRLNPYISEVWYDLGTLYE 365
>gi|314936264|ref|ZP_07843611.1| TPR domain protein [Staphylococcus hominis subsp. hominis C80]
gi|313654883|gb|EFS18628.1| TPR domain protein [Staphylococcus hominis subsp. hominis C80]
Length = 225
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E+AE+ ++A T D N A + NL N + + + +LY AL + ++A Y
Sbjct: 50 GEIEKAERFFQKAITLDDKNGAVYYNLANLYYEQSRFQEAIKLYQRALKYNMNPVDANYM 109
Query: 240 LGLAHKHLNEYSDSLECF 257
+G++ L+ ++L F
Sbjct: 110 IGMSFSQLDAQREALPFF 127
>gi|62184697|ref|YP_219482.1| hypothetical protein CAB050 [Chlamydophila abortus S26/3]
gi|407458848|ref|YP_006736951.1| hypothetical protein B602_0060 [Chlamydia psittaci M56]
gi|62147764|emb|CAH63508.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
gi|405785736|gb|AFS24481.1| tetratricopeptide repeat family protein [Chlamydia psittaci M56]
Length = 335
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAEQRLKETLELDPTAALAYCYLGIIALESGRTAEALTWCTKGLESEPTDSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y++++ECF K+
Sbjct: 79 LRYCYGVALDRDNRCEEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKIL 138
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ LY A
Sbjct: 139 ELDPWNPQSLYNKA 152
>gi|417405241|gb|JAA49338.1| Putative o-linked n-acetylglucosamine transferase ogt [Desmodus
rotundus]
Length = 915
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPFKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F+ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKIFNHALQLNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|398826543|ref|ZP_10584784.1| hypothetical protein PMI42_07889 [Bradyrhizobium sp. YR681]
gi|398220918|gb|EJN07351.1| hypothetical protein PMI42_07889 [Bradyrhizobium sp. YR681]
Length = 568
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 141 KAVTFLRMNDVSQAV-DVLKSCDEMTSSAATNL-SFIYFLQGEVEQAEKMAEEACTADTY 198
+AV + + D ++ + D ++ S AA NL Y+ +G+ + A ++A
Sbjct: 67 RAVGWNKKGDYAKVIADTTEAIRLQPSQAAYNLRGSAYYDKGDYDIATADFDDALKLGPP 126
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+ F N GN + DY K Y A+ D + N G++ + L + +L +
Sbjct: 127 SGIIFHNRGNAWRGKGDYAKAITDYDAAIKADPRSALSFQNRGISKEALGDLDGALADIN 186
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLL 296
+ + P++P+ L S++ GD+++A +D +E + L
Sbjct: 187 QAIRLDPTLPQPLINRTSIWRARGDLDRAIADGSEAIRL 225
>gi|449276234|gb|EMC84869.1| Transmembrane and TPR repeat-containing protein 3, partial [Columba
livia]
Length = 921
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D T + Y
Sbjct: 546 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLRALELDRTNADLWY 605
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L + +++L+ F++ + P+ L+ A L + +GD + + LL
Sbjct: 606 NLAIVYIELKDPTEALKNFNQALELNPAHKLALFNSALLMQESGDARLRPEAKQRLL 662
>gi|424824746|ref|ZP_18249733.1| hypothetical protein CAB1_0055 [Chlamydophila abortus LLG]
gi|333409845|gb|EGK68832.1| hypothetical protein CAB1_0055 [Chlamydophila abortus LLG]
Length = 335
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAEQRLKETLELDPTAALAYCYLGIIALESGRTAEALTWCTKGLESEPTDSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y++++ECF K+
Sbjct: 79 LRYCYGVALDRDNRCEEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKIL 138
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ LY A
Sbjct: 139 ELDPWNPQSLYNKA 152
>gi|403263903|ref|XP_003924239.1| PREDICTED: tetratricopeptide repeat protein 6-like isoform 2
[Saimiri boliviensis boliviensis]
Length = 520
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 14/227 (6%)
Query: 90 EMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA--HSSLAQDLEI-------N 140
E +A+K L + + I+ GYN +Q A H ++A D++
Sbjct: 261 EATKKAQKDFLKALHINPGYIKARICLGYNLQIQGKFQKAWNHFTIAMDIDPKNYLAYEG 320
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTSSA--ATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+AV L+M + A+ + + ++ ++A TN I+ G + A K +EA + +
Sbjct: 321 RAVVCLQMGNNFAAMQDINAAMKINTTAEFLTNRGVIHEFMGHKQNAMKDYQEAISLNPK 380
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
S A+ N GN + + + + AL D L N +A+ L +Y ++ E F
Sbjct: 381 YSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYVLMNRAIANTILKKYEEAKEDFA 440
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLLEAVRNDAL 304
+ P V + A Y E A D+N+ L L+ NDAL
Sbjct: 441 NVIERCPFWAAVYFNRAHFYYCLKQYELAEEDLNKALSLKP--NDAL 485
>gi|386819124|ref|ZP_10106340.1| tetratricopeptide repeat protein [Joostella marina DSM 19592]
gi|386424230|gb|EIJ38060.1| tetratricopeptide repeat protein [Joostella marina DSM 19592]
Length = 321
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 157 VLKSCDEMTSSAATNLSFIYFLQGEVEQA-EKMAEEACTADTYNS--AAFVNLGNCAMAR 213
V KS D + A NL +Y+ Q + +A + E TA T +A+ NLGN M
Sbjct: 85 VSKSSD--NAKAKYNLGNVYYKQESMGEAFMRYKEAGTTAKTKEEKHSAYHNLGNVFMKN 142
Query: 214 EDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+++ K E Y AL ND E YNL LA + L + D
Sbjct: 143 KEHQKAVEAYKEALRNDPADEETRYNLALAKEMLKKQQD 181
>gi|407454868|ref|YP_006733759.1| hypothetical protein B598_0062 [Chlamydia psittaci GR9]
gi|405781411|gb|AFS20160.1| tetratricopeptide repeat family protein [Chlamydia psittaci GR9]
Length = 335
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAEQRLKETLELDPTAALAYCYLGIIALESGRTAEALTWCTKGLESEPADSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y++++ECF K+
Sbjct: 79 LRYCYGVALDRDNRCEEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKIL 138
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ LY A
Sbjct: 139 ELDPWNPQSLYNKA 152
>gi|224088480|ref|XP_002308458.1| predicted protein [Populus trichocarpa]
gi|222854434|gb|EEE91981.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A + +A AD +Y A+ +LG
Sbjct: 112 DPENACALTHCGILYKDEGRLLEAAESYHKALKADPSYKPASECLAIVLTDLGTSLKLSG 171
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ +G + Y AL D A YNLG+ + + +Y +L C+ K P E +
Sbjct: 172 NTQEGIQKYYDALKVDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAAIERPMYAEAYCNM 231
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 232 GVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 281
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 18/188 (9%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G++ Q
Sbjct: 230 NMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTYY 289
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 290 KKALYYNWHYADAMYNLGVAYGEMLKFEMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN 349
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL------EAVRNDA 303
++EC+ +I P+ + L + +Y + G ++ A+ + E ++ EA N
Sbjct: 350 LDKAVECYQATLSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMANPTYAEAYNN-- 407
Query: 304 LSQLHREM 311
L L+R++
Sbjct: 408 LGVLYRDV 415
>gi|195113545|ref|XP_002001328.1| GI22034 [Drosophila mojavensis]
gi|193917922|gb|EDW16789.1| GI22034 [Drosophila mojavensis]
Length = 708
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
SA NL +Y G++E AEK A A A++NLG A++ Y + + Y A
Sbjct: 481 SALMNLGNLYREYGQLETAEKYIRAALAAYPAFPVAWMNLGIVQSAQKKYDQALDSYRQA 540
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
L + YN+G ++Y ++L + AI P P+ I ++ + G E
Sbjct: 541 LKYRSDYAVCYYNMGNLFLEQHQYGEALHHWQHAVAINPRQPKAWANILTMLDNRGMYED 600
Query: 287 ASDVNENLLLEA--------VRNDALSQLHREMKHEA 315
A ++ L + +R + L +L ++ EA
Sbjct: 601 ALRISAQALTQLPTEPSILFIRANVLGKLKHYLEAEA 637
>gi|432374101|ref|ZP_19617132.1| cellulose synthase operon protein C [Escherichia coli KTE11]
gi|430893523|gb|ELC15847.1| cellulose synthase operon protein C [Escherichia coli KTE11]
Length = 1157
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEV-------EQAEKMAEEACTADTYNSAAFVNLGNCAMARE 214
D+ S N ++ QG+ EQAE++ +A + D +S A + LG+ AMAR+
Sbjct: 340 DKWNSLLKVNRYWLAIQQGDAALKANNPEQAERLFRQARSVDNADSYAVLGLGDVAMARK 399
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
DY + Y L D++ A+ GLA+ + + + E F
Sbjct: 400 DYPAAERYYQQTLRMDSSNTNAVR--GLANIYRQQSPEKAEAF 440
>gi|395326383|gb|EJF58793.1| TPR-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 1173
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACT----ADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G Q ++ A + T A+ ++ ++ LG MA + Y K E Y A+
Sbjct: 310 LGWLYHQDGSTFQNQEAAIQYLTKSLEAEPGDAQSWYLLGRAYMAGQKYNKAYEAYQQAV 369
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + I P + EV + + SLYE
Sbjct: 370 YRDGRNPTFWCSIGVLYFQINQYRDALDAYSRAIRINPYISEVWFDLGSLYE 421
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM---PEVLYQIASLYEITG 282
ALD D E L+ LG+ +K +Y++SLECF ++ PS ++ +QI ++E
Sbjct: 226 ALDFD-KANEILFRLGIIYKQQGKYAESLECFDRILRNPPSPLAHADIWFQIGHVFEQQR 284
Query: 283 DVEQASDVNENLLLE 297
D +A D E ++ E
Sbjct: 285 DHVRARDAYERVVHE 299
>gi|365762025|gb|EHN03642.1| Cyc8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 707
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 286 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 345
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 346 DAYTRAIRLNPYISEVWYDLGTLYE 370
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP------EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH ++S +LECF + I+P P ++ +Q+ S+ E G+ + A
Sbjct: 183 EIYFRLGIIYKHQGKWSQALECF---RYILPQPPAPLQEWDIWFQLGSVLESMGEWQGAK 239
Query: 289 DVNENLLLE 297
+ E++L +
Sbjct: 240 EAYEHVLAQ 248
>gi|381182875|ref|ZP_09891655.1| TPR domain protein [Listeriaceae bacterium TTU M1-001]
gi|380317231|gb|EIA20570.1| TPR domain protein [Listeriaceae bacterium TTU M1-001]
Length = 222
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+G++E+A KM E + ++N GN ++ +D+ + + + A++ D T A Y
Sbjct: 13 EGKLEEAVKMFTEVIEEHPNDPVGYINFGNVLLSMDDFERAELFFKRAVELDETVPAAFY 72
Query: 239 NLGLAHKHLNEYSDSLECFH 258
+LG + L Y ++ F
Sbjct: 73 SLGTLYFELERYGEATRAFQ 92
>gi|186683676|ref|YP_001866872.1| photosystem I assembly protein Ycf3 [Nostoc punctiforme PCC 73102]
gi|226713050|sp|B2J1S7.1|YCF3_NOSP7 RecName: Full=Photosystem I assembly protein ycf3
gi|186466128|gb|ACC81929.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 173
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 207 GNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
G A A +Y + E Y AL ND I LYN+GL + +++ +LE +H+
Sbjct: 42 GMSAQAEGEYAEALEYYEEALTLEEDTNDRGYI--LYNMGLIYASNGDHNKALELYHQAI 99
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNE 292
+ P +P+ L IA +Y G+ E+ + NE
Sbjct: 100 ELNPRLPQALNNIAVIYHYQGEKEKEAGDNE 130
>gi|402815701|ref|ZP_10865293.1| TPR repeat-containing protein YrrB [Paenibacillus alvei DSM 29]
gi|402506741|gb|EJW17264.1| TPR repeat-containing protein YrrB [Paenibacillus alvei DSM 29]
Length = 259
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSCDEM---TSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
IN L++ + +A+ ++ ++ + A L YF + QA K E++ +
Sbjct: 75 INLGRVNLKLGNTEEALKSFETAVKVEPDSEDAYFYLGVYYFQERNYIQAIKCYEKSLSI 134
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D+ + A +NLG C + + K + A D C+ A+YN G+ + + Y ++L+
Sbjct: 135 DSEQAEAHLNLGLCHLKLHVFDKALYEFKQAYLLDTECMYAIYNQGITYYLMGNYKEALD 194
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ K + +VLY IA Y D E + + + +L
Sbjct: 195 NYLKAYDDMTDDIDVLYDIAHCYYKLNDFENSINWGQKVL 234
>gi|239637573|ref|ZP_04678545.1| TPR domain protein [Staphylococcus warneri L37603]
gi|239596791|gb|EEQ79316.1| TPR domain protein [Staphylococcus warneri L37603]
Length = 222
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E++E+ ++A T D N A + NLGN ++ + + +LY A+ + ++ Y
Sbjct: 48 GEIEKSERFFQKAITIDPENGAIYYNLGNVYYNQDRFKEAIKLYQQAMKYNIEPVDCNYM 107
Query: 240 LGLAHKHLNEYSDSL 254
+G++ LN + ++L
Sbjct: 108 IGMSFNQLNAHKEAL 122
>gi|442805033|ref|YP_007373182.1| tetratricopeptide TPR_2 repeat protein [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442740883|gb|AGC68572.1| tetratricopeptide TPR_2 repeat protein [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 276
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 152 SQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM 211
S+A+ K+ DE + +NL+ + + +GE+++A M +E A+ +A + +LG A+
Sbjct: 106 SKAMQKSKNQDE-KNRVKSNLALVIWKKGELDKAFGMLKE-VIAEYKTTAVYGSLGYLAI 163
Query: 212 AREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVL 271
+ D + ++ + A D ++ L NL + E + E F KL P PE
Sbjct: 164 EKGDLDEALKINLEAYDYNSDNAIILDNLAHLYHLRGEMDKAGEMFEKLMEKKPHFPEAY 223
Query: 272 YQIASLYEITGDVEQASDVNENLL 295
Y E G++++A ++ E L
Sbjct: 224 YDYGKYLEDAGELDKAREMYEKAL 247
>gi|441497885|ref|ZP_20980093.1| TPR repeat containing protein [Fulvivirga imtechensis AK7]
gi|441438451|gb|ELR71787.1| TPR repeat containing protein [Fulvivirga imtechensis AK7]
Length = 467
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDE---MTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ + M +A+D K+ E A L++ + GE+E + ++ AD Y
Sbjct: 140 GLAYQSMEKYQEAIDAYKNAIEENIFHDGALYELAYCLDICGELESSISYYKKFIDADPY 199
Query: 199 NSAAFVNLGNC--AMAREDYVKGKELYVHALDNDATCIE-----ALYNLGLAHKHLNEYS 251
+ AA+ NLG + R D +HA D A IE A +N+G + + +Y
Sbjct: 200 SQAAWYNLGIVYNKLGRFDEA------IHAYDY-AIVIEENFSSAYFNMGNTYAQMEKYP 252
Query: 252 DSLECFHKLQAIVPSMPEVLYQIASLYE 279
+L+ + K I PEV Q+A++YE
Sbjct: 253 QALDAYKKTIDIEGPSPEVYCQMATVYE 280
>gi|429741985|ref|ZP_19275632.1| tetratricopeptide repeat protein [Porphyromonas catoniae F0037]
gi|429157626|gb|EKY00207.1| tetratricopeptide repeat protein [Porphyromonas catoniae F0037]
Length = 399
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 142 AVTFLRMNDVSQAVDVL----KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
A ++L + D + AV +L K E T T +S IY QG+ +QA + ++A
Sbjct: 225 ARSYLALGDTTGAVPILERGAKLFPETTFFFGTMIS-IYQAQGKYDQAVALIDKALEVAP 283
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
N V GN +D+ E+Y L +D +AL+NLG
Sbjct: 284 MNPNLLVLRGNVYFLAKDWTHATEVYKKVLQHDPNNYDALFNLG 327
>gi|406981151|gb|EKE02662.1| TPR Domain containing protein [uncultured bacterium]
Length = 627
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%)
Query: 177 FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA 236
+ ++ AE+ ++A ++ + NL + A +D K K+ + A+ +A
Sbjct: 250 YKSADIRGAEEYFKKAVEFKPNSAKIYNNLASIAYTNDDLDKAKDYSLKAISYYPGYSDA 309
Query: 237 LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
YNL L +K N+ +EC +++ + PS + Y A Y GD E+A
Sbjct: 310 YYNLALIYKRKNDPLQEMECLNRVLELTPSNYQAFYSRAIAYYAAGDFEKA 360
>gi|398335166|ref|ZP_10519871.1| hypothetical protein LkmesMB_05594 [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 1060
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 161 CDEMTSSA-----ATNLSFIY------FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC 209
DEM + A N IY + G+V+QA ++ + T DT N LG
Sbjct: 894 LDEMFTGGDRIEVALNPDVIYEDAKQLYKTGKVDQALELLKTGYTHDTANQKINKLLGLL 953
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
+ +DY E+ + L D E + L +A+K + +Y +L+ KL+ I P
Sbjct: 954 SFKGKDYTTAIEVLNNYLKTDPGLHEYWFYLSIANKKVGKYEQALQASLKLRDIQPENLS 1013
Query: 270 VLYQIASLYEITGDVEQASDVNENLL 295
L ++ +Y +T + A +V L+
Sbjct: 1014 NLVNLSDIYRLTDQFDLAEEVARKLM 1039
>gi|445059485|ref|YP_007384889.1| TPR domain protein [Staphylococcus warneri SG1]
gi|443425542|gb|AGC90445.1| TPR domain protein [Staphylococcus warneri SG1]
Length = 222
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E++E+ ++A T D N A + NLGN ++ + + +LY A+ + ++ Y
Sbjct: 48 GEIEKSERFFQKAITIDPENGAIYYNLGNVYYNQDRFKEAIKLYQQAMKYNIEPVDCNYM 107
Query: 240 LGLAHKHLNEYSDSL 254
+G++ LN + ++L
Sbjct: 108 IGMSFNQLNAHKEAL 122
>gi|432371656|ref|ZP_19614707.1| cellulose synthase operon protein C [Escherichia coli KTE11]
gi|430898799|gb|ELC20930.1| cellulose synthase operon protein C [Escherichia coli KTE11]
Length = 1035
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEV-------EQAEKMAEEACTADTYNSAAFVNLGNCAMARE 214
D+ S N ++ QG+ EQAE++ +A + D +S A + LG+ AMAR+
Sbjct: 218 DKWNSLLKVNRYWLAIQQGDAALKANNPEQAERLFRQARSVDNADSYAVLGLGDVAMARK 277
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
DY + Y L D++ A+ GLA+ + + + E F
Sbjct: 278 DYPAAERYYQQTLRMDSSNTNAV--RGLANIYRQQSPEKAEAF 318
>gi|156835877|ref|XP_001642195.1| hypothetical protein Kpol_172p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156112645|gb|EDO14337.1| hypothetical protein Kpol_172p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 418
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 45/84 (53%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++A + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 309 DPSDAATWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 368
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 369 AYTRAIRLNPYISEVWYDLGTLYE 392
>gi|440681617|ref|YP_007156412.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428678736|gb|AFZ57502.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 365
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 8/175 (4%)
Query: 120 WCV-----QSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSF 174
W V Q+ R +A L Q L+ A+ M D A D + A NL
Sbjct: 90 WGVRSFLAQTTRQAALDWLNQGLQ---AIQGGNMQDAITAFRQAIQSDSTLAPAHYNLGL 146
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
G+++ A +A AD + AF NLG + + + +L D
Sbjct: 147 ALRQAGQLQPAADAFYQATQADPQFAPAFANLGGALLEGNNLQLAADYLQRSLQIDPQLG 206
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
A YNLGL + ++ ++ F K + PE Y + Y G V+ A +
Sbjct: 207 FAHYNLGLVKELQKDWESAIASFKKAMTYSQNSPEPAYHLGMSYLQQGKVQLAKE 261
>gi|427717078|ref|YP_007065072.1| hypothetical protein Cal7507_1782 [Calothrix sp. PCC 7507]
gi|427349514|gb|AFY32238.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 330
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 3/156 (1%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
++N+ + ++ V A+ + D + A NL G+++ A A
Sbjct: 71 KLNQGLQAIQAGRVQDAIAFFRQAAQLDPKLAPAHYNLGLALRQAGQLQPAADAFYRATQ 130
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD + AF NLG + + + A++ D+ A YNLGL + + ++
Sbjct: 131 ADPKFALAFANLGGALLEGNNLQLANDYLQRAIELDSKLGFAHYNLGLLKEQQRNWDQAI 190
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
F K + PE Y + Y G ++QA D
Sbjct: 191 ASFKKAIEYSQNAPEPAYHLGLSYLQQGKIDQAKDA 226
>gi|323305949|gb|EGA59684.1| Cyc8p [Saccharomyces cerevisiae FostersB]
Length = 803
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 282 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 341
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 342 DAYTRAIRLNPYISEVWYDLGTLYE 366
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 155 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 207
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 208 PPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 244
>gi|269119938|ref|YP_003308115.1| hypothetical protein Sterm_1318 [Sebaldella termitidis ATCC 33386]
gi|268613816|gb|ACZ08184.1| TPR repeat-containing protein [Sebaldella termitidis ATCC 33386]
Length = 534
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+T+ M + +A+ L E+ S A NL FIY Q + E A +++ +
Sbjct: 27 GITYSEMQEYDKAIKNLDKAIEINPDNSLAYNNLGFIYSEQKDFENA--ISKYKIAIEKG 84
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
N+ A+ NLG +++E Y + ++ Y AL + LYNLG+ + +Y ++++ +
Sbjct: 85 NTIAYNNLGTIYLSQERYKEAEDSYKKALISFKDNSMILYNLGIFYFEQEQYDEAIKFYE 144
Query: 259 K 259
K
Sbjct: 145 K 145
>gi|224140075|ref|XP_002323412.1| predicted protein [Populus trichocarpa]
gi|222868042|gb|EEF05173.1| predicted protein [Populus trichocarpa]
Length = 917
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + +A + +A AD +Y A+ +LG
Sbjct: 112 DPQNACALTHCGILYKDEGRLLEAAESYHKALKADLSYKPASECLAIVLTDLGTSLKLSG 171
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ +G + Y AL D A YNLG+ + + +Y +L C+ K P E +
Sbjct: 172 NTQEGIQKYYEALKVDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAAMERPMYAEAYCNM 231
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ GD+E A E L E +N+ AL+ ++K E +
Sbjct: 232 GVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDFGTKVKLEGD 281
>gi|119505194|ref|ZP_01627269.1| TPR repeat protein [marine gamma proteobacterium HTCC2080]
gi|119458885|gb|EAW39985.1| TPR repeat protein [marine gamma proteobacterium HTCC2080]
Length = 434
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 151 VSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCA 210
+++A V+K D +++A L+ + GE++++ ++ E T + N+ NLGN
Sbjct: 28 ITEAKKVIK--DHQSATAVNILALAHKRLGEIDRSIEIYENLLTNNPSNTMFLANLGNIY 85
Query: 211 MAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP-- 268
+ K +EL+ L DA I A LG + + +L + K+Q V +P
Sbjct: 86 SDQGRLTKARELFEKVLSVDANHINAYLGLGNVYVMQAKNDLALRLYEKMQTEVRDIPIE 145
Query: 269 ---EVLYQIASLYEITGD 283
++ Y++A +Y G+
Sbjct: 146 QLQKINYRVAEIYRKGGE 163
>gi|444720701|gb|ELW61477.1| Transmembrane and TPR repeat-containing protein 3 [Tupaia
chinensis]
Length = 678
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 307 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 366
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F+ + P L+ A L + +G+V+ + + LL
Sbjct: 367 NLAIVHIELKEPNEALKNFNHALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 423
>gi|323338666|gb|EGA79882.1| Cyc8p [Saccharomyces cerevisiae Vin13]
Length = 889
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 225 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 284
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 285 DAYTRAIRLNPYISEVWYDLGTLYE 309
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 98 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 150
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 151 PPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 187
>gi|366988585|ref|XP_003674059.1| hypothetical protein NCAS_0A11200 [Naumovozyma castellii CBS 4309]
gi|342299922|emb|CCC67678.1| hypothetical protein NCAS_0A11200 [Naumovozyma castellii CBS 4309]
Length = 907
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 44/84 (52%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D +S + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 302 DPNDSTTWYHLGRVHMIRNDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 361
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 362 AYTRAIRLNPYISEVWYDLGTLYE 385
>gi|168001300|ref|XP_001753353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695639|gb|EDQ81982.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 926
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATN---LSFIYFLQGEVEQAEKMAEEACT 194
+ ++ +T L M SQAV++LK + + A + L +Y +G+ ++A A
Sbjct: 111 QFDEVITTL-MCGYSQAVEILKEVVRIAPNVADSYHTLGLLYDAKGDRKRALNFYMIAAH 169
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYV--HALDNDATCIEALYNLGLAHKHLNEYSD 252
+ + L + +M + G+ +Y A+ D T ++A ++ + LNE+
Sbjct: 170 LTPKDIVLWKRLASWSMELGN--PGQVIYCLQKAMRADPTDVDARWDCASLYAELNEFPK 227
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+++C +L A+ P E+ +A + + G EQA+ + E+L+
Sbjct: 228 AIDCLEQLLALRPGDVEICKMVAKMRQKNGQSEQATQLLEHLI 270
>gi|171350|gb|AAA34545.1| CYC8 protein [Saccharomyces cerevisiae]
gi|172726|gb|AAA35103.1| SSN6 protein [Saccharomyces cerevisiae]
Length = 966
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 291 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 350
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 351 DAYTRAIRLNPYISEVWYDLGTLYE 375
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 164 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 216
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 217 PPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 253
>gi|398364855|ref|NP_009670.3| Cyc8p [Saccharomyces cerevisiae S288c]
gi|308153433|sp|P14922.2|CYC8_YEAST RecName: Full=General transcriptional corepressor CYC8; AltName:
Full=Glucose repression mediator protein CYC8
gi|3550|emb|CAA46973.1| nuclear phosphoprotein [Saccharomyces cerevisiae]
gi|476068|emb|CAA55615.1| glucose repression mediator protein [Saccharomyces cerevisiae]
gi|536450|emb|CAA85069.1| CYC8 [Saccharomyces cerevisiae]
gi|285810447|tpg|DAA07232.1| TPA: Cyc8p [Saccharomyces cerevisiae S288c]
gi|392300953|gb|EIW12042.1| Cyc8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 966
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 291 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 350
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 351 DAYTRAIRLNPYISEVWYDLGTLYE 375
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 164 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 216
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 217 PPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 253
>gi|376263061|ref|YP_005149781.1| tetratricopeptide repeat protein [Clostridium sp. BNL1100]
gi|373947055|gb|AEY67976.1| tetratricopeptide repeat protein [Clostridium sp. BNL1100]
Length = 233
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 14/174 (8%)
Query: 119 NWCVQSIR-NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS--------SAA 169
NW ++ + SA + L L+ + +++ + K TS S
Sbjct: 28 NWLEKAYKTGSAKPGIVTTL----GYLLLKEGHLDESLKIFKEQINSTSKIKDNDLYSLK 83
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN 229
+N + + GE+++A + EE + N+ + +LG + + + K + A++
Sbjct: 84 SNYALALWKNGELDRAIALYEE-IFPNYKNTNVYGSLGYLYILKGNLEKALKFNQEAMEY 142
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
+ T L NLG + + EY + E F KL A+ P PE Y A + E GD
Sbjct: 143 NNTGAVILDNLGQTYYMMGEYEKADEIFKKLMALSPKFPEAYYDYALVMEKLGD 196
>gi|365767154|gb|EHN08642.1| Cyc8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 978
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 291 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 350
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 351 DAYTRAIRLNPYISEVWYDLGTLYE 375
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 164 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 216
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 217 PPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 253
>gi|349576490|dbj|GAA21661.1| K7_Cyc8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 972
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 291 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 350
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 351 DAYTRAIRLNPYISEVWYDLGTLYE 375
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 164 GSLDYAEEAFAKVLELDPHFEKTN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 216
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 217 PPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 253
>gi|343083369|ref|YP_004772664.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342351903|gb|AEL24433.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyclobacterium
marinum DSM 745]
Length = 237
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 43/101 (42%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
I+F G+ + A + D N F N GN M +E+Y Y A D +
Sbjct: 65 IFFQTGKWDDAIDSFSRSIDLDESNYKPFFNRGNVYMEKEEYKMALVDYNRANGLDINQV 124
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA 275
+ YN GLA L Y D+L F K P P+VL+ A
Sbjct: 125 DIYYNRGLALLGLEMYEDALIDFDKALHANPEQPQVLFNKA 165
>gi|242065108|ref|XP_002453843.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
gi|241933674|gb|EES06819.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
Length = 1011
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY + A + A + + S+ NL
Sbjct: 375 VEEAINCYRSCLALQANHPQALTNLGNIYMEWSMISAAASFYKAAISVTSGLSSPLNNLA 434
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D T +AL N G K + +++++ + + I P+M
Sbjct: 435 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNM 494
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 495 AEAHANLASAYKDSGHVETA 514
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
R+N+ +Q + + A +NL + QG +++A EA D + + A+ NL
Sbjct: 204 RLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSNL 263
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
M D K Y A+ + +A N G +K L D++ C+ + P
Sbjct: 264 AGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCYQRALQARPD 323
Query: 267 MPEVLYQIASLYEITGDVEQA 287
+A++Y G ++ A
Sbjct: 324 YAMAYGNLATIYYEQGQLDMA 344
>gi|190408728|gb|EDV11993.1| glucose repression mediator protein [Saccharomyces cerevisiae
RM11-1a]
Length = 963
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 291 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 350
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 351 DAYTRAIRLNPYISEVWYDLGTLYE 375
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 164 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 216
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 217 PPAPLQGWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 253
>gi|290878127|emb|CBK39186.1| Cyc8p [Saccharomyces cerevisiae EC1118]
Length = 972
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 291 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 350
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 351 DAYTRAIRLNPYISEVWYDLGTLYE 375
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 164 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 216
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 217 PPAPLQGWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 253
>gi|256270295|gb|EEU05508.1| Cyc8p [Saccharomyces cerevisiae JAY291]
Length = 946
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 282 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 341
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 342 DAYTRAIRLNPYISEVWYDLGTLYE 366
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 155 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 207
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 208 PPAPLQGWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 244
>gi|147840941|emb|CAN64348.1| hypothetical protein VITISV_025331 [Vitis vinifera]
Length = 565
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT-YNSAA------FVNLGNCAMARE 214
D A T+L +Y +G + +A + ++A D+ Y AA +LG
Sbjct: 110 DPQNLCALTHLGILYKDEGRLLEAAESYDKALRIDSSYKPAAECLAIVLTDLGTSLKLAG 169
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ +G + Y AL D A YNLG+ + + +Y +L C+ K P E +
Sbjct: 170 NTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAALERPMYAEAYCNM 229
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+++ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 230 GVIFKNRGDLESAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 279
>gi|427717067|ref|YP_007065061.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
gi|427349503|gb|AFY32227.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
Length = 1269
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 58/130 (44%)
Query: 158 LKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYV 217
L + + + A NL I+ +QG+ ++A + A + A++NLG ++ ++
Sbjct: 643 LLTINPNVAQAHCNLGSIWQMQGKTQEAIAAYQRAIQLQPNFAVAYLNLGRLYANQQSWL 702
Query: 218 KGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
+ K+ A+ + A YNLG + + ++ C H P + + + L
Sbjct: 703 EAKQCLQQAVRLQPESVAAYYNLGNVLGQIGQIEKAIACLHHALKHQPDFVDTWHSLGCL 762
Query: 278 YEITGDVEQA 287
+ GD+++A
Sbjct: 763 WMAQGDMDKA 772
>gi|410452440|ref|ZP_11306429.1| hypothetical protein BABA_01770 [Bacillus bataviensis LMG 21833]
gi|409934485|gb|EKN71370.1| hypothetical protein BABA_01770 [Bacillus bataviensis LMG 21833]
Length = 234
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG---NCAMAREDYVKGKELYVHA 226
NL + Y L+GE E A K + A D N +A+ NLG N +D +K + V
Sbjct: 85 VNLGYSYHLKGESEDAVKQLQIAIDLDKKNVSAYFNLGLVYNDEKRYDDALKQSKQAVEL 144
Query: 227 LDNDATCIEALYNL-GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
D Y L G+ ++ L Y D+L + ++P +++++I + E G+V+
Sbjct: 145 APKDYKG----YLLEGMVYRKLKMYKDALASLQEADKLMPVNNDIIFEIGRVAEDQGNVK 200
Query: 286 QASDVNENLLLEAVRNDAL 304
A E L +A+ D L
Sbjct: 201 DA----EELYKKALSYDPL 215
>gi|172046640|sp|Q10W18.2|YCF3_TRIEI RecName: Full=Photosystem I assembly protein ycf3
Length = 173
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLEC 256
A+ G A A +Y + E Y AL+ ND + I LYN+GL H E+ +LE
Sbjct: 37 AYYRDGMSAQADGEYAEALENYYEALNLEDDPNDRSYI--LYNIGLIHASNGEHDQALEY 94
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGD 283
+H+ P MP+ L IA ++ G+
Sbjct: 95 YHQALENNPRMPQALNNIAVIFHYRGE 121
>gi|406701258|gb|EKD04408.1| hypothetical protein A1Q2_01292 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1478
Score = 44.7 bits (104), Expect = 0.090, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA ++ D ++ ++ LG MA + Y K E Y A+ + ++G+
Sbjct: 352 EQAVNYLTKSLETDAADAQSWYLLGRALMAGQRYNKAYEAYQQAVYREGRNPSFWCSIGV 411
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+ +N++ D+L+ + + + P M +V Y + SLYE
Sbjct: 412 LYFQINQFRDALDAYSRAIRLNPYMWQVWYNLGSLYE 448
Score = 39.7 bits (91), Expect = 3.3, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP------EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH +YS SL+CF + I+ + P ++ +Q+ +YE+ GD A
Sbjct: 261 EIYFRLGIIYKHQRKYSASLDCF---RYIINNPPRPLTSWDIWFQLGHVYELNGDFTAAR 317
Query: 289 D 289
D
Sbjct: 318 D 318
>gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 550
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A LSF+ + G+ QAE + ++A D + NLG + Y + + Y AL
Sbjct: 408 ALNYLSFLLYELGDFNQAELLCKKALAVDPNAYEPYHNLGLIYQDKLLYEQAIKFYQSAL 467
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
++ C EA NLG + +++ F + P E ++ +YE G +E++
Sbjct: 468 KSNPDCAEAYNNLGCIYYEKGNLKEAINQFEEAIKANPKFAEAHKNLSIIYENMGLIEKS 527
Query: 288 SDVNENLLLEAVRNDALSQ 306
+N+ + ++N ++SQ
Sbjct: 528 QQLND-FQFQILQNQSMSQ 545
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 100/261 (38%), Gaps = 46/261 (17%)
Query: 142 AVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ + R N +A + K C +E A NL+ +Y+ +++ A+ E+A
Sbjct: 141 GIIYERNNMDEKAEEYYKKCLQTNENYLGAYFNLAQVYYKLNKMQNAKLCLEKASIIFPS 200
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
F LG ED+ + + ++ D I AL+ LG+ + E +++ F
Sbjct: 201 EPEVFNKLGQLCQEMEDWQQAIGYFEKTIEIDPENINALFELGVTQFQIEELDEAIHNFK 260
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVE------------QASDVNENLLLEAVRNDALSQ 306
K I P L+++ +Y +E Q +V NL+L +
Sbjct: 261 KTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKIQPHNVKANLILAGI------- 313
Query: 307 LHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFL 366
+ A+K IL + +L C Q I+ + ++ D + +
Sbjct: 314 ------YLAQKMILEAKQL---------------CEQVIKVDSRNA---DALYYLGIIYQ 349
Query: 367 RMNDVSQAVDVLKSCDEMTSS 387
+ N++ +A+ + K ++ +
Sbjct: 350 KENNIQKAISIFKEVTQINPT 370
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 16/219 (7%)
Query: 84 LSQLHREM-KHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRN--SAHSSLAQDLEIN 140
L+Q++ ++ K + K L A +I PS + F+ C Q + + A + +EI+
Sbjct: 174 LAQVYYKLNKMQNAKLCLEKASIIFPSEPEVFNKLGQLC-QEMEDWQQAIGYFEKTIEID 232
Query: 141 K---------AVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKM 188
VT ++ ++ +A+ K + +A L IY +E A++
Sbjct: 233 PENINALFELGVTQFQIEELDEAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEY 292
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
E+A +N A + L +A++ ++ K+L + D+ +ALY LG+ ++ N
Sbjct: 293 LEQAIKIQPHNVKANLILAGIYLAQKMILEAKQLCEQVIKVDSRNADALYYLGIIYQKEN 352
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
++ F ++ I P+ Q+ LY G VE A
Sbjct: 353 NIQKAISIFKEVTQINPTKYIAQIQLGQLYHQQGKVEDA 391
>gi|367006883|ref|XP_003688172.1| hypothetical protein TPHA_0M01630 [Tetrapisispora phaffii CBS 4417]
gi|357526479|emb|CCE65738.1| hypothetical protein TPHA_0M01630 [Tetrapisispora phaffii CBS 4417]
Length = 1043
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 45/84 (53%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++A + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 301 DPSDAATWYHLGRVHMIRADYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 360
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 361 AYTRAIRLNPYISEVWYDLGTLYE 384
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP------EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH +++ +LECF + I+P P ++ +Q+ S+ E G+ + A
Sbjct: 197 EIYFRLGIIYKHQGKWTQALECF---RYILPQPPSPLQEWDIWFQLGSVLESMGEWQGAK 253
Query: 289 DVNENLLLE 297
+ EN+L++
Sbjct: 254 EAYENVLVQ 262
>gi|151946505|gb|EDN64727.1| cytochrome C [Saccharomyces cerevisiae YJM789]
Length = 979
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 291 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 350
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 351 DAYTRAIRLNPYISEVWYDLGTLYE 375
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H + E + LG+ +KH ++S +LECF + I+P
Sbjct: 164 GSLDYAEEAFAKVLELDPHFEKAN----EIYFRLGIIYKHQGKWSQALECF---RYILPQ 216
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++L +
Sbjct: 217 PPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVLAQ 253
>gi|426224257|ref|XP_004006290.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Ovis
aries]
Length = 918
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 545 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPIKAKEAYLKALELDRNNADLWY 604
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F+ + P L+ A L + +G+V + + LL
Sbjct: 605 NLAIVHIELKEPNEALKNFNHALELNPKHKLALFNSAILMQESGEVRLRPEARKRLL 661
>gi|406898394|gb|EKD42009.1| hypothetical protein ACD_73C00392G0002 [uncultured bacterium]
Length = 411
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSSAA---TNLSFIYFLQGEVEQAEKMAEEACTAD 196
N+ VT L D +A+ K+ E++ A NL Y +G+++ A + E+A D
Sbjct: 38 NEGVTALYNGDTDRALFEFKTATELSPEYAEGWNNLGLAYKYKGQMDLAIQALEKAIDLD 97
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS--- 253
+ ++ + +LG Y EL+ ++ + +A YN+GL + + + D+
Sbjct: 98 SKYASPYNHLGAVYYNLGRYSDALELFKKSIKYNNKFSDAYYNMGLTYVAMADNGDTSKL 157
Query: 254 ---LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+E + P +++A +Y+ G +EQA
Sbjct: 158 DMAVEALSTATTLNAEHPYAHHELAKIYQRQGKIEQA 194
>gi|378824517|ref|YP_005089687.1| ycf3 gene product (chloroplast) [Synedra acus]
gi|371572716|gb|AEX37812.1| photosystem I assembly protein Ycf3 (chloroplast) [Synedra acus]
Length = 168
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIE---ALYNLGLAHKHLNEYSDSLECFH 258
++ G A + Y + E Y AL + + LYN+GL + + Y+ SLE +H
Sbjct: 31 SYYRAGMAAQTKGRYSEALENYYEALSLEEDPYDRSYTLYNIGLIYGNTGRYTQSLEFYH 90
Query: 259 KLQAIVPSMPEVLYQIASLYEI 280
+ + P++P+ LY I +Y +
Sbjct: 91 QALGLNPNLPQALYNIGVIYHM 112
>gi|242278707|ref|YP_002990836.1| hypothetical protein Desal_1234 [Desulfovibrio salexigens DSM 2638]
gi|242121601|gb|ACS79297.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
DSM 2638]
Length = 322
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 145 FLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
+L + + VL S D S+AA L Y E EQA + ++A D NS
Sbjct: 27 YLNHGEFEDGIRVLSEELSEDPEDSTAAYYLGRYYLALDEPEQASTLLQKAARLDPDNSE 86
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE--YSDSLECFHK 259
+G A +D+ + + Y AL D I A NL LAH +L+E + ++L + K
Sbjct: 87 YRFWVGVAYWALDDFKEEQSSYRQALSIDEDNISA--NLYLAHSYLDEGKFVEALGLYDK 144
Query: 260 LQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + P+ LY A + G EQA
Sbjct: 145 VLVMDKYNPQALYNRADILTRQGLHEQA 172
>gi|50303983|ref|XP_451941.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641073|emb|CAH02334.1| KLLA0B09262p [Kluyveromyces lactis]
Length = 941
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 45/84 (53%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D+ ++ ++ +LG M R DY + + A++ D+ ++G+ + + +Y D+L+
Sbjct: 354 DSTDATSWYHLGRIHMIRNDYTSAYDAFQQAVNRDSRNPTFWCSIGVLYYQIAQYRDALD 413
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 414 AYTRAIRLNPYISEVWYDLGTLYE 437
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP------EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH +++ +LECF + I+P P +V +Q+ S+ E G+ + A
Sbjct: 250 EIYFRLGIIYKHQGKWNQALECF---RYILPQPPAPLQEWDVWFQLGSVLESMGEWQGAR 306
Query: 289 DVNENLL 295
D E+++
Sbjct: 307 DAYEHII 313
>gi|195394660|ref|XP_002055960.1| GJ10481 [Drosophila virilis]
gi|194142669|gb|EDW59072.1| GJ10481 [Drosophila virilis]
Length = 708
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
SA NL +Y G+++ AEK A TA A++NLG A++ Y + + Y A
Sbjct: 482 SALMNLGNLYRENGQLQTAEKYIRAALTAYPAFPVAWMNLGIVQSAQKKYDQALDSYRQA 541
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
L + YN+G ++Y+++L + A+ P P+ I ++ + E
Sbjct: 542 LKYRSDYAVCYYNMGNLFLEQHQYAEALHHWQHAVAVNPRQPKAWANILTMLDNRAMYED 601
Query: 287 ASDVNENLLLE 297
A ++E L++
Sbjct: 602 ALRISEQALVQ 612
>gi|401837901|gb|EJT41750.1| CYC8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 984
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 285 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 344
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 345 DAYTRAIRLNPYISEVWYDLGTLYE 369
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H E + LG+ +KH ++S +LECF + I+P
Sbjct: 158 GSLDYAEEAFAKVLELDPHF----EKANEIYFRLGIIYKHQGKWSQALECF---RYILPQ 210
Query: 267 MP------EVLYQIASLYEITGDVEQASDVNENLL 295
P ++ +Q+ S+ E G+ + A + E++L
Sbjct: 211 PPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVL 245
>gi|451979886|ref|ZP_21928294.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
gi|451762906|emb|CCQ89508.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
Length = 504
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 59/150 (39%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
E +A+ R+ D + + D A L + F +G +AE A D
Sbjct: 14 EAAQALNAQRLEDARNLLQQVLELDASHFDALHILGVLAFQKGSPAEAEDFIRRALAVDD 73
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+ A NLG R + E Y A+ + A +NLGL + +++ F
Sbjct: 74 GFAEAHYNLGKVLRERGRLKEAAEAYQKAVRINDRLDPAWFNLGLVELEWGHHPQAVDAF 133
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ I P+ P+ + + + GDV++A
Sbjct: 134 RRAAEIDPTDPDYPFNLGNALSTLGDVKEA 163
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 56/141 (39%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
R+ + ++A ++ A NL + G QA A D + NL
Sbjct: 91 RLKEAAEAYQKAVRINDRLDPAWFNLGLVELEWGHHPQAVDAFRRAAEIDPTDPDYPFNL 150
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
GN D + + + + D + A NLG+ + E ++++ + + I P
Sbjct: 151 GNALSTLGDVKEARRQFERTVFLDPSYAHAWNNLGIMLRECGEIKEAMDAYQRALDINPQ 210
Query: 267 MPEVLYQIASLYEITGDVEQA 287
+ + + +LYE G+ EQA
Sbjct: 211 FADAHFNLGNLYEAQGNAEQA 231
>gi|406934379|gb|EKD68695.1| TPR Domain containing protein [uncultured bacterium]
Length = 498
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
Y + E AEKM ++ D + A+ NLGN M R ++ E + ++ +
Sbjct: 47 YVQSAKFEDAEKMFKKVIEFDPFYVDAYNNLGNIYMLRNNFDLALEQFTRVINLAPSNDS 106
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
A N+GL + S ++E F K + P E Y +AS Y
Sbjct: 107 AYSNIGLIYMKSGSLSKAIEMFQKASELNPKSVEAFYNLASCY 149
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEA--CT 194
N + +++ +S+A+++ + E+ A NL+ Y L + AE ++A
Sbjct: 110 NIGLIYMKSGSLSKAIEMFQKASELNPKSVEAFYNLASCYLLFNSPQNAETAIKKALEIK 169
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D Y S + L + Y + ++L+ + D++ +AL LGL + EY +
Sbjct: 170 PDDYESKSV--LAKAYSMGKKYDEARKLFEEVIGADSSNFDALNELGLICLYQKEYKKAN 227
Query: 255 ECFHKLQA--IVPSMPEVLYQIASLYEITGDVEQASD-----VNENLLLEAVRNDALSQL 307
E F K++ + +V Y +A +E +V +A D + N AVRND S L
Sbjct: 228 EYFEKIKGNKNIEKSSKVYYNMAICHEKLKNVTEARDAYAESIKRNPNYAAVRNDYGSFL 287
Query: 308 HREMKHE 314
+ K E
Sbjct: 288 FSQNKLE 294
>gi|328852705|gb|EGG01849.1| hypothetical protein MELLADRAFT_38960 [Melampsora larici-populina
98AG31]
Length = 399
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + + AD++++ ++ LG M +++ K E Y A+ D ++G+
Sbjct: 254 EQAVAIITRSLAADSHDAFSWYLLGRAYMTIQNFNKAYESYQQAVYRDGKNPAFWCSIGV 313
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
+ + +Y DSL+ + + + P + EV Y + +LYE D
Sbjct: 314 LYYAIMQYHDSLDAYSRAIRLNPYISEVWYNLGALYESCND 354
>gi|432854953|ref|ZP_20083224.1| cellulose synthase operon protein C [Escherichia coli KTE144]
gi|431398035|gb|ELG81467.1| cellulose synthase operon protein C [Escherichia coli KTE144]
Length = 1157
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
++AE++ ++A D +S A + LG+ AMAR+DY + Y H L D++ A+ GL
Sbjct: 368 DRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQHTLRMDSSNTNAVR--GL 425
Query: 243 AHKHLNEYSDSLECF 257
A+ + + + E F
Sbjct: 426 ANIYRQQSPEKAEAF 440
>gi|386347974|ref|YP_006046223.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339412941|gb|AEJ62506.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 918
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G++E A K+ E +S + G A+ ++ + KE + AL+ EAL N
Sbjct: 25 GDLETASKLVHELLHEVPLSSGVHLLSGMIALRQDRNEEAKEAFSKALELGGEEAEALNN 84
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LG+ ++ ++ ++E F K A P P++LY +A+ + G E+A
Sbjct: 85 LGVIYRKEGDHRKAIEYFRKALAADPDRPDILYNLANACKDAGLFEEA 132
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D SA NL+ +Y +G + +A + E+ TAD + NLG Y + +
Sbjct: 143 DPHLVSAYNNLATLYQQRGALGKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYEEARA 202
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
AL +EAL NLG+ + + +L CF + + P + S+ +
Sbjct: 203 SLHRALQKRPGWVEALNNLGIVEQSRGHHEAALACFREALTLDPLHAAAANNMGSILALL 262
Query: 282 GDVEQASD 289
G +A D
Sbjct: 263 GRYREAFD 270
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 20/200 (10%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ A NL IY +G+ +A + +A AD NL N + + + Y
Sbjct: 79 AEALNNLGVIYRKEGDHRKAIEYFRKALAADPDRPDILYNLANACKDAGLFEEAEAAYRK 138
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
AL++D + A NL ++ ++ K P P +LY + LY+ G E
Sbjct: 139 ALEHDPHLVSAYNNLATLYQQRGALGKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYE 198
Query: 286 QASDVNENLL------LEAVRNDALSQLHREMKHEAEKCILTSAKLIAP----------- 328
+A L +EA+ N + + R HEA A + P
Sbjct: 199 EARASLHRALQKRPGWVEALNNLGIVEQSR-GHHEAALACFREALTLDPLHAAAANNMGS 257
Query: 329 --SIEDNFSNGYNWCVQSIR 346
++ + ++W VQ++R
Sbjct: 258 ILALLGRYREAFDWFVQALR 277
>gi|433463445|ref|ZP_20420999.1| TPR domain-containing protein [Halobacillus sp. BAB-2008]
gi|432187540|gb|ELK44820.1| TPR domain-containing protein [Halobacillus sp. BAB-2008]
Length = 219
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 139 INKAVTFLRMNDVSQAVDVL-KSCDEMTSSAATNLSFIYFL--QGEVEQAEKMAEEACTA 195
+ + + ++ +D +A + ++ DE ++F L + E+AE+ A
Sbjct: 4 LKQGIERMQNHDYEEAAKLFTEAIDENPKEPVGYINFGNLLTHMNDYERAERFYHRAIEL 63
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + AF LGN +EDY K + ++ A+ + + LGL H ++ +L
Sbjct: 64 DEKAATAFYGLGNVYYEQEDYNKAQTQFLTAIKKGLNEADVHFMLGLTFLHQDQVKMALP 123
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-LEAVRNDA-----LSQLHR 309
+ P ++ +Q G +EQA V N+L LE +DA + LH+
Sbjct: 124 YLLTASELAPEDVDIQFQYGLCLAQNGAIEQAEQVMHNVLQLEEQHSDAHYNLGVVALHK 183
Query: 310 EMKHEAEKCI 319
E EAEK +
Sbjct: 184 E---EAEKAL 190
>gi|385302549|gb|EIF46676.1| glucose repression mediator protein [Dekkera bruxellensis AWRI1499]
Length = 694
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
++ LG M+++DY E + HA++ D+ ++G+ + +++Y D+L+ + +
Sbjct: 254 SWYYLGRVYMSKQDYPNAYESFQHAVNIDSRNPTFWCSIGVLYYKISQYKDALDAYTRAI 313
Query: 262 AIVPSMPEVLYQIASLYE 279
+ P + EV Y + +LYE
Sbjct: 314 RLNPYLSEVWYDLGTLYE 331
>gi|297692556|ref|XP_002823611.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Pongo
abelii]
Length = 914
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|29833122|ref|NP_827756.1| hypothetical protein SAV_6580 [Streptomyces avermitilis MA-4680]
gi|29610244|dbj|BAC74291.1| hypothetical protein SAV_6580 [Streptomyces avermitilis MA-4680]
Length = 670
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 9/175 (5%)
Query: 113 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAA--T 170
+F + ++++ + +S A I+ V R +D S+A DV D+ T
Sbjct: 357 DFHGALTYADRALKQNPYSERALSSRIDALVELGRYDDASKAADV---ADQRRPGVPVFT 413
Query: 171 NLSFIYFLQGEVEQAEKMAEEA-CTADTYNSAAFV--NLGNCAMAREDYVKGKELYVHAL 227
+++ L+G+V+ A ++ E+A TA + ++V LG A + +Y Y AL
Sbjct: 414 RYAYVRELRGDVKTARRVLEQALSTATSRGDISYVASALGQLAWNQGEYKAALTYYARAL 473
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
D + + AL A + + ++ ++ P +P+ L ++ LYE G
Sbjct: 474 AADDSYLPALEGRARAQAAQGDSAAAIRGMEQVVERFP-LPQPLVELGELYEARG 527
>gi|456888697|gb|EMF99650.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 221
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 19/177 (10%)
Query: 130 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSA-----ATNLSFIY------FL 178
H L DL + K V F QA DEM +S A N IY +
Sbjct: 32 HGELTDDLSLLK-VEF-------QAEAKKDELDEMFTSGDRIDVALNPDMIYEDAKQLYK 83
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G+++QA ++ + T DT N LG + +DY E+ + L D E +
Sbjct: 84 NGKIDQALELLKTGYTNDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWF 143
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L +A+K + +Y +LE KL I P L ++ +Y + + A V L+
Sbjct: 144 YLSIANKKVGKYEQALEASLKLNDIQPDNLSNLVNLSDIYRLMDQFDLAEKVARKLI 200
>gi|207347672|gb|EDZ73767.1| YBR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 561
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
AD ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L
Sbjct: 291 ADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDAL 350
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYE 279
+ + + + P + EV Y + +LYE
Sbjct: 351 DAYTRAIRLNPYISEVWYDLGTLYE 375
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP------EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH ++S +LECF + I+P P ++ +Q+ S+ E G+ + A
Sbjct: 188 EIYFRLGIIYKHQGKWSQALECF---RYILPQPPAPLQGWDIWFQLGSVLESMGEWQGAK 244
Query: 289 DVNENLL 295
+ E++L
Sbjct: 245 EAYEHVL 251
>gi|51476220|emb|CAH18100.1| hypothetical protein [Homo sapiens]
Length = 914
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|114646136|ref|XP_522486.2| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Pan
troglodytes]
gi|426373621|ref|XP_004053695.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Gorilla gorilla gorilla]
gi|410213978|gb|JAA04208.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410264382|gb|JAA20157.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410302722|gb|JAA29961.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410341671|gb|JAA39782.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410341673|gb|JAA39783.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410341675|gb|JAA39784.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
Length = 914
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|224809432|ref|NP_861448.2| transmembrane and TPR repeat-containing protein 3 [Homo sapiens]
gi|46798873|emb|CAG26973.1| SMILE protein [Homo sapiens]
gi|109658812|gb|AAI17178.1| Transmembrane and tetratricopeptide repeat containing 3 [Homo
sapiens]
gi|109658968|gb|AAI17176.1| Transmembrane and tetratricopeptide repeat containing 3 [Homo
sapiens]
gi|119617821|gb|EAW97415.1| transmembrane and tetratricopeptide repeat containing 3 [Homo
sapiens]
gi|313883880|gb|ADR83426.1| transmembrane and tetratricopeptide repeat containing 3 [synthetic
construct]
Length = 914
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|57999456|emb|CAI45938.1| hypothetical protein [Homo sapiens]
Length = 914
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|186685148|ref|YP_001868344.1| hypothetical protein Npun_F5064 [Nostoc punctiforme PCC 73102]
gi|186467600|gb|ACC83401.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 307
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 3/155 (1%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
+N+ + ++ V A+ K D + A NL Y G+++ + A A
Sbjct: 50 LNQGLQAIQAGKVKDAIAAFKQAAKLDPTLAPAYYNLGLAYRQTGQLQPSADAFYRATQA 109
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + AF NLG + + + AL+ D A YN GL + + ++
Sbjct: 110 DPKFAPAFANLGGALLEGNNLQLANDYLQRALELDPKLGFAHYNFGLVREQQGDCEKAIA 169
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
F + + PE Y I Y G +++A D
Sbjct: 170 SFKQAIEYSKNAPEPPYHIGMCYLQQGKLDRARDA 204
>gi|399020435|ref|ZP_10722565.1| putative methyltransferase (contains TPR repeat) [Herbaspirillum
sp. CF444]
gi|398094850|gb|EJL85204.1| putative methyltransferase (contains TPR repeat) [Herbaspirillum
sp. CF444]
Length = 445
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
+ +A+ F D+ +A + + D + A L + G+ E+ + +C
Sbjct: 18 LQQAIGFHTAGDLEKAEKIYRDVLARDPVHPIALHYLGIFLYQNGQDEEGVQNIRLSCAL 77
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
N++ +LGN A ++ + E Y ALD D NLG + + D+++
Sbjct: 78 QPENASWHNDLGNVLFALREFEEASEAYQAALDADPGDHIVWNNLGSSQLQHGDTEDAIQ 137
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGD 283
F + + P L + ++YE GD
Sbjct: 138 SFKQTLELAPDFGPALIHLGNIYEAAGD 165
>gi|384097252|ref|ZP_09998373.1| aerotolerance protein BatC [Imtechella halotolerans K1]
gi|383837220|gb|EID76620.1| aerotolerance protein BatC [Imtechella halotolerans K1]
Length = 291
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 168 AATNLSFIYFLQGEVEQA-EKMAEEACTADTYNSA--AFVNLGNCAMAREDYVKGKELYV 224
A NL Y+ Q +A + + TA T A+ NLGN M ++Y K E Y
Sbjct: 76 AKYNLGTAYYKQNSFSEAFSRFKQAGNTAQTKEEKHKAYHNLGNVFMKNKEYEKAVETYK 135
Query: 225 HALDNDATCIEALYNLGLAHKHL 247
AL ND T E YNL LA + L
Sbjct: 136 EALRNDPTDEETRYNLALAKEML 158
>gi|365894959|ref|ZP_09433090.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3843]
gi|365424290|emb|CCE05632.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3843]
Length = 740
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
R++ QA+ + + + A NL +YF Q E+A K+ E A A + AF L
Sbjct: 72 RLDVAEQALTRAVALEPRHAEALVNLGLVYFHQKRYEEARKLQERATAAKPNFAVAFTTL 131
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
GN M + + E + A+ +A N G+ + + ++ E F++ A+ P
Sbjct: 132 GNTLMNMRLFDQALEAHQRAIAVKPDYADAYCNRGMTQLLMQRHQEAYESFNRALALNP 190
>gi|94971753|ref|YP_593801.1| hypothetical protein Acid345_4728 [Candidatus Koribacter versatilis
Ellin345]
gi|94553803|gb|ABF43727.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
Length = 718
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 1/142 (0%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
A +NL QG E A E+ +++ A NLGN +A+ D + Y A
Sbjct: 98 GALSNLGITLQSQGRQEDAIACYEKVIALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRA 157
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
LD +A YNLG A++ ++ + E + + A P PE + + G+
Sbjct: 158 LDLKPDYADAHYNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMGETSA 217
Query: 287 ASDVNEN-LLLEAVRNDALSQL 307
A + E + L A D L+ L
Sbjct: 218 AIEAFERAIALRAEYADPLNNL 239
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ A NL + QG++EQA + A + A NLGN R ++ + +E Y
Sbjct: 131 AEAHNNLGNLRLAQGDLEQAIASYQRALDLKPDYADAHYNLGNAYQRRGNWTQARESYRR 190
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI 263
A+ + EA NLG+ + + E S ++E F + A+
Sbjct: 191 AVASRPEFPEAQNNLGVVLREMGETSAAIEAFERAIAL 228
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 46/108 (42%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G ++ A K+ E+ D N A +L A + + L L + AL N
Sbjct: 43 GRLQPAAKIYEQVLRGDPNNVEALHSLSILASQIGETATAERLMRQVLSLQPEHVGALSN 102
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LG+ + D++ C+ K+ A+ P E + +L GD+EQA
Sbjct: 103 LGITLQSQGRQEDAIACYEKVIALRPHHAEAHNNLGNLRLAQGDLEQA 150
>gi|390596716|gb|EIN06117.1| TPR-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 252
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G + D KELY +++ +L+NLG+ H HL EY D++ + + A+ PS
Sbjct: 90 GTAKLEEGDVQAAKELYKRSVEIKRNA-SSLFNLGVTHYHLKEYDDAISAWKESIALQPS 148
Query: 267 MPEVLYQIASLYEIT 281
P+ +AS Y I+
Sbjct: 149 SPDAHTNLASAYIIS 163
>gi|307152343|ref|YP_003887727.1| hypothetical protein Cyan7822_2480 [Cyanothece sp. PCC 7822]
gi|306982571|gb|ADN14452.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
Length = 235
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 150 DVSQAVDVLKSCDEMTSSAA---TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
D S A+ +L E +A N +YF QG+ QA K +A + A+ N
Sbjct: 56 DYSGAIALLDQLIESHPESAIDYNNRGLMYFWQGQFFQAIKDYNQAIELNKKLDQAYNNR 115
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF-------HK 259
NC MA+ ++ + Y A+D + ++A N G+ + L Y +LE F H+
Sbjct: 116 ANCYMAQGNWAEALTDYETAIDLNPANMKAWLNQGITLRELGLYDLALENFDLTLTISHR 175
Query: 260 LQAIV 264
LQ +
Sbjct: 176 LQGRI 180
>gi|194380400|dbj|BAG63967.1| unnamed protein product [Homo sapiens]
Length = 914
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|326431903|gb|EGD77473.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 983
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 28/180 (15%)
Query: 127 NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAE 186
N+ ++ A +I+KA+ + D++ ++L T+++ +NL Y +GE ++A
Sbjct: 404 NNLGNAYADKGDIDKAIHYYE-KDLAITAELLGDKHPSTATSYSNLGNAYADKGEHDKAI 462
Query: 187 KMAEEAC-------------TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD----- 228
E +C TAD+Y+ NLGN ++ K + Y +LD
Sbjct: 463 HYFERSCEIRVETLGEKHPSTADSYH-----NLGNAYADEGEHDKAIQYYEKSLDIKVET 517
Query: 229 ---NDATCIEALYNLGLAHKHLNEYSDSLECFHK-LQAIVPSMPEVLYQIASLYEITGDV 284
+ +A NLG+ K EY ++EC+ K L V ++ E A LY G V
Sbjct: 518 LGEKHPSTAQAYTNLGIVFKRKGEYDRAIECYQKSLDIKVETLGEKHPSTADLYNNLGIV 577
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 46/198 (23%)
Query: 130 HSSLAQDLEINKAVTFLRMNDVSQAVDVL-KSCD----------EMTSSAATNLSFIYFL 178
H S AQ N + F R + +A++ KS D T+ NL ++
Sbjct: 522 HPSTAQAY-TNLGIVFKRKGEYDRAIECYQKSLDIKVETLGEKHPSTADLYNNLGIVFKR 580
Query: 179 QGEVEQA------------EKMAEEAC-TADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+GE ++A E + E+ TAD+YNS LGN +++ K E Y
Sbjct: 581 KGEYDKAIECYQKSLDIKVETLGEKHTKTADSYNS-----LGNAYADIDEHDKAIECYEK 635
Query: 226 AL--------DNDATCIEALYNLGLAHKHLNEYSDSLECFHK-LQAIVPSMPE------- 269
L D + + NLG+ K EY ++EC+ K L V ++ E
Sbjct: 636 DLTITAELLGDKHPSTAASYNNLGIVFKRKGEYDRAIECYQKSLDIKVETLGEKHTKTAQ 695
Query: 270 VLYQIASLYEITGDVEQA 287
+ I L++ GD +QA
Sbjct: 696 AYFNIGLLHDRHGDKKQA 713
>gi|398340698|ref|ZP_10525401.1| hypothetical protein LkirsB1_15659 [Leptospira kirschneri serovar Bim
str. 1051]
gi|421088349|ref|ZP_15549174.1| stage II sporulation protein E [Leptospira kirschneri str. 200802841]
gi|421129973|ref|ZP_15590173.1| stage II sporulation protein E [Leptospira kirschneri str.
2008720114]
gi|410002980|gb|EKO53429.1| stage II sporulation protein E [Leptospira kirschneri str. 200802841]
gi|410359348|gb|EKP06457.1| stage II sporulation protein E [Leptospira kirschneri str.
2008720114]
Length = 1060
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 130 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIY------FLQGEVE 183
H L DL + K V F + +V D + A N IY + G+V+
Sbjct: 871 HGELTDDLSLLK-VEFQTERKADEPEEVFTGGDRI--EVALNPDVIYEDAKQLYKNGKVD 927
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
QA ++ + T DT N LG + +DY E+ + L D E + L +A
Sbjct: 928 QALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFYLSIA 987
Query: 244 HKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+K + +Y +L+ KL I P L ++ +Y + + A ++ + L+
Sbjct: 988 NKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEIAKKLI 1039
>gi|434395309|ref|YP_007130256.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428267150|gb|AFZ33096.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 279
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 129 AHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQA 185
A S A D +N+ + ++ N + +A+ ++ D + A NL G+++ A
Sbjct: 16 ASSQTATDW-VNQGLKLIQQNKLKEAIAAFETATKLDPKLAPAHYNLGLALRETGQLQPA 74
Query: 186 EKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHK 245
A + + A+ NLG + + + +E +A+ + A YNLGL +
Sbjct: 75 ADAFYRAIQVEPKFALAYANLGAVLLEGNNAQQAQEFLQNAIKLEPNLGLAHYNLGLVKE 134
Query: 246 HLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
++ ++ ++ P++PE+ Y + +Y V+QA
Sbjct: 135 QQQDWQGAIAAYNTALKYSPNLPEITYHLGVVYLQQNQVDQA 176
>gi|397516303|ref|XP_003828370.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Pan
paniscus]
Length = 914
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|326433206|gb|EGD78776.1| TPR repeat containing protein [Salpingoeca sp. ATCC 50818]
Length = 609
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 34/155 (21%)
Query: 170 TNLSFIYFLQGEVEQAEKMAEEA-------------CTADTYNSAAFVNLGNCAMAREDY 216
+NL +YF QG+ ++A + E+A TA+TYN NLGN ++ +Y
Sbjct: 320 SNLGNVYFSQGQYDKAIEFYEKALAIRVETLGEKHLSTANTYN-----NLGNAYCSKGEY 374
Query: 217 VKGKELYVHAL--------DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV---- 264
K Y AL D + + NLGLA+ EY +++ + K AI
Sbjct: 375 DKTIVFYDKALAIKLELLGDKHPSTADTYNNLGLAYADKGEYDTAIQHYEKALAIRVEML 434
Query: 265 ----PSMPEVLYQIASLYEITGDVEQASDVNENLL 295
PS + + + + Y G+ ++A ++ E L
Sbjct: 435 GEKHPSTADTYHNLGNAYADKGEYDKAIELYEKDL 469
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 74/181 (40%), Gaps = 39/181 (21%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT--NLSFIYFLQGEVEQAEKMAEEA--- 192
E +K + F D + A+ + D+ S+A T NL Y +GE + A + E+A
Sbjct: 373 EYDKTIVFY---DKALAIKLELLGDKHPSTADTYNNLGLAYADKGEYDTAIQHYEKALAI 429
Query: 193 ----------CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL--------DNDATCI 234
TADTY+ NLGN + +Y K ELY L +
Sbjct: 430 RVEMLGEKHPSTADTYH-----NLGNAYADKGEYDKAIELYEKDLTITVEAWGEKHPNTA 484
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQIASLYEITGDVEQ 286
++ NLG A+ EY ++E + K AI PS L I L+ GD EQ
Sbjct: 485 DSYNNLGSAYHSKGEYGKAIELYEKALAIAAETVGEKHPSTAMTLENIGMLHNERGDKEQ 544
Query: 287 A 287
A
Sbjct: 545 A 545
>gi|339236951|ref|XP_003380030.1| RNA polymerase II-associated protein 3 [Trichinella spiralis]
gi|316977223|gb|EFV60354.1| RNA polymerase II-associated protein 3 [Trichinella spiralis]
Length = 349
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
++++ + E+A + +AD + + N + ++Y + AL D+T ++
Sbjct: 28 FYVKKDYEKAIMCYSRSISADPFRPVVYCNRAMAYLKLKNYAEAYADCSKALTFDSTYVK 87
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIAS--LYEITGDVEQASDVNEN 293
ALY G+A K LN + D++E F + + P+ IA L EI V+ A N+
Sbjct: 88 ALYRRGMASKGLNNFDDAVEDFQHVLTLDPNN-----DIAKKELEEIISKVKPAE--NDP 140
Query: 294 LLLEAVRNDALSQLHREMK 312
LL+ V N + + +K
Sbjct: 141 LLVYPVENPDEKEYQKPLK 159
>gi|418686640|ref|ZP_13247805.1| stage II sporulation protein E [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418740689|ref|ZP_13297066.1| stage II sporulation protein E [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|410738711|gb|EKQ83444.1| stage II sporulation protein E [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410752066|gb|EKR09042.1| stage II sporulation protein E [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 1060
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 130 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIY------FLQGEVE 183
H L DL + K V F + +V D + A N IY + G+V+
Sbjct: 871 HGELTDDLSLLK-VEFQTERKADEPEEVFTGGDRI--EVALNPDVIYEDAKQLYKNGKVD 927
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
QA ++ + T DT N LG + +DY E+ + L D E + L +A
Sbjct: 928 QALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFYLSIA 987
Query: 244 HKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+K + +Y +L+ KL I P L ++ +Y + + A ++ + L+
Sbjct: 988 NKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEIAKKLI 1039
>gi|158261895|dbj|BAF83125.1| unnamed protein product [Homo sapiens]
Length = 899
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|124022007|ref|YP_001016314.1| hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT
9303]
gi|123962293|gb|ABM77049.1| Hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT
9303]
Length = 594
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 2/153 (1%)
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
+DL N+ F + +A + KS E A + + +QG++E AE + +A
Sbjct: 2 RDLCKNQVAGFGEQKEKKRAKRLNKS--ESRGEALQKEAMNFHMQGDIENAEYLYRQAIE 59
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+ A F NLG + + LY A++ +A NLG HK L +L
Sbjct: 60 IGFLHEAIFSNLGVICKNSDRQEEAIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQAL 119
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
K + P P+ + +Y+ G+++QA
Sbjct: 120 AATLKSLELKPDNPDAHINLGGIYKELGNLDQA 152
>gi|363751086|ref|XP_003645760.1| hypothetical protein Ecym_3459 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889394|gb|AET38943.1| Hypothetical protein Ecym_3459 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1115
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 45/84 (53%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D+ ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 374 DSTDATTWYHLGRIHMVRNDYTAAYDAFQQAVNRDSRNPTFWCSIGVLYYQISQYRDALD 433
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 434 AYTRAIRLNPYISEVWYDLGTLYE 457
>gi|428313243|ref|YP_007124220.1| hypothetical protein Mic7113_5158 [Microcoleus sp. PCC 7113]
gi|428254855|gb|AFZ20814.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 484
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 152 SQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM 211
+Q ++ L S + + ++++ + + + + E AE+ A D + A LGN
Sbjct: 28 AQRIEGLYS-ENLEAASSFQVGLTLYNRSDFEGAEQALRRALQFDPFIPMAHYLLGNSLF 86
Query: 212 AREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVL 271
+ + Y AL D EA YNLGL S+++ + K ++ P++PE
Sbjct: 87 QQGKTDLATDQYRRALALDPNMAEAYYNLGLTMYRQGNVSEAISQYQKALSLKPNLPEAR 146
Query: 272 YQIASLYEITGDVEQA 287
Y +A E G ++A
Sbjct: 147 YNMALALESQGRTQEA 162
>gi|418677583|ref|ZP_13238857.1| stage II sporulation protein E [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400320773|gb|EJO68633.1| stage II sporulation protein E [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 1060
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 130 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIY------FLQGEVE 183
H L DL + K V F + +V D + A N IY + G+V+
Sbjct: 871 HGELTDDLSLLK-VEFQTERKADEPEEVFTGGDRI--EVALNPDVIYEDAKQLYKNGKVD 927
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
QA ++ + T DT N LG + +DY E+ + L D E + L +A
Sbjct: 928 QALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFYLSIA 987
Query: 244 HKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+K + +Y +L+ KL I P L ++ +Y + + A ++ + L+
Sbjct: 988 NKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEIAKKLI 1039
>gi|356535232|ref|XP_003536152.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Glycine max]
Length = 988
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A+ C + + A TNL IY V A + + T SA + NL
Sbjct: 352 VEEAIQCYNQCLTLQPNHPQALTNLGNIYMEWNMVAAAAQYYKATLNVTTGLSAPYNNLA 411
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +YV Y L D + L N G +K + SD+++ + + + P+M
Sbjct: 412 IIYKQQGNYVDAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAIVVRPTM 471
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 472 AEAHANLASAYKDSGHVEAA 491
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 160 SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
+CD A NL G VE+A + + T + A NLGN M + V
Sbjct: 330 ACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQPNHPQALTNLGNIYM-EWNMVAA 388
Query: 220 KELYVHALDNDATCIEALYN-LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
Y A N T + A YN L + +K Y D++ C++++ I P + L + Y
Sbjct: 389 AAQYYKATLNVTTGLSAPYNNLAIIYKQQGNYVDAISCYNEVLRIDPLAADGLVNRGNTY 448
Query: 279 EITGDVEQA 287
+ G V A
Sbjct: 449 KEIGRVSDA 457
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 14/220 (6%)
Query: 72 RKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC-VQSIRNSAH 130
R A A N A + + + EA +C A I P + D SN N Q + A+
Sbjct: 162 RPNFADAWSNLASAYMRKGRLTEAAQCC-RQALAINPLMVDAHSNLGNLMKAQGLVQEAY 220
Query: 131 SSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFL 178
S + L I N A F+ D ++A+ K ++ S A NL +Y
Sbjct: 221 SCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKA 280
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G ++A + A A+ NL + + Y A+ D +EA
Sbjct: 281 LGMPQEAIACYQHALQTRPNYGMAYGNLASIYYEQGQLDMAILHYKQAVACDPRFLEAYN 340
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
NLG A K + ++++C+++ + P+ P+ L + ++Y
Sbjct: 341 NLGNALKDVGRVEEAIQCYNQCLTLQPNHPQALTNLGNIY 380
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 99/260 (38%), Gaps = 19/260 (7%)
Query: 45 ERVLIKLQEQFGHADSHNIELTFSNINRKKNARAVRNDALSQLHREMKHEAEKCILTSAK 104
E V + L Q ++ L SN ++N N L H+ + C+ + +
Sbjct: 64 EDVYLSLAHQMYKTGNYKQALEHSNTVYERNPLRTDNLLLLGAVYYQLHDFDMCVAKNEE 123
Query: 105 LIAPSIEDNFSNGYNWCVQSIRNSAHSSLA--------------QDLEINKAVTFLRMND 150
+ IE +F+ Y + + + LA D N A ++R
Sbjct: 124 AL--RIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRPNFADAWSNLASAYMRKGR 181
Query: 151 VSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
+++A + + + + A +NL + QG V++A EA + A+ NL
Sbjct: 182 LTEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLA 241
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
M D+ + + Y A+ + +A NLG +K L +++ C+ P+
Sbjct: 242 GLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQHALQTRPNY 301
Query: 268 PEVLYQIASLYEITGDVEQA 287
+AS+Y G ++ A
Sbjct: 302 GMAYGNLASIYYEQGQLDMA 321
>gi|20197768|gb|AAM15237.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
Length = 1115
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 136 DLEINKAVTFLR-MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
DL+ N ++ + M+ + QA ++ C +SA L+ +F G+ E++ E A
Sbjct: 265 DLQANDSIGMRKGMDRMQQAFEIYPYC----ASALNYLANHFFFTGQHFLVEQLTETALA 320
Query: 195 ADTYN---SAAFVNLGNCAMAREDYVKGKELYVHAL----DNDATCIEALYNLGLAHKHL 247
T+ S +F NL ++ D+ K Y+ A+ +N + + LG L
Sbjct: 321 VTTHGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQVQLKL 380
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E S+ F K+ + P E L + LY G E+A
Sbjct: 381 GELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKA 420
>gi|428223797|ref|YP_007107894.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
gi|427983698|gb|AFY64842.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
Length = 4135
Score = 44.3 bits (103), Expect = 0.13, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 131 SSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAE 190
++L Q ++++AVT R A+ + + + + A+ L + G+ + A
Sbjct: 1221 TALKQTQQLSEAVTHYR-----AALRLAPTLADAHARLASTLQEL----GQPDDAIDHYR 1271
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
+A T D+ + A NL N +R+D+ Y AL E YNLG K L
Sbjct: 1272 QAVTLDSNLAGAHNNLANLLRSRDDFEGASRHYQAALALLPDFAEGHYNLGGVLKELGRL 1331
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNE 292
+++ + + + P + + + Y TGD+E+A +E
Sbjct: 1332 PEAIAAYQQALDLKPGLARAHNNLGACYAETGDLERAIAAHE 1373
>gi|427722289|ref|YP_007069566.1| hypothetical protein Lepto7376_0290 [Leptolyngbya sp. PCC 7376]
gi|427354009|gb|AFY36732.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 305
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 138 EINKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
++ + + ++ V+QA+ + + D A NL Y G++++A +
Sbjct: 55 KMTQGLQRIQQGQVAQAIQLFNEAIALDPELWQAHYNLGLAYRQAGDLQKAADAFYQTVV 114
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+ F ++G + +++ + ++ A+ D A YN GL H+ + ++
Sbjct: 115 IQPNFALGFASIGGILLDVQNWSQAQQYLEQAIAVDPNLAIAHYNFGLLHRQFGRTAAAI 174
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGD-VEQASDVNENLLLEAVR-NDALSQLH 308
+ + + P++ E Q+A Y + GD ++QA E+L+ A++ N L +H
Sbjct: 175 QAWETANQLAPNLTEAAIQLAEAY-LDGDRIKQA----EHLITTALKQNPRLPAVH 225
>gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 809
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVE 183
S N+ S+ + +KA+ F D++ V+ L T+ + L Y+ + E +
Sbjct: 397 STYNNLGSAYYSKGDYDKAIAFYE-KDLAITVETLGEKHPGTADSYLGLGVAYYSKSEND 455
Query: 184 QAEKMAEEA-------------CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL--- 227
+A ++ E+A TA+TYN NLGN ++ +Y K +LY AL
Sbjct: 456 EAIQLYEKALAIKVETLGEKHPSTAETYN-----NLGNTYYSKGEYDKAIQLYEKALAIT 510
Query: 228 -----DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQI 274
+ + + NLG A+ EY ++ + K AI PS +
Sbjct: 511 VETLGEKHPSTADTYNNLGNAYSDKGEYDKAIVFYEKALAIKVETLGEKHPSTASTHNNL 570
Query: 275 ASLYEITGDVEQASDVNENLLLEAVRNDALSQLH 308
+ Y GD ++A +E L A+R + L + H
Sbjct: 571 GTAYADKGDYDKAIQHHETAL--AIRVETLGEKH 602
>gi|22760766|dbj|BAC11325.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 482 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 541
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ A + + +G+V+ + + LL
Sbjct: 542 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 598
>gi|118376183|ref|XP_001021274.1| SLEI family protein [Tetrahymena thermophila]
gi|89303041|gb|EAS01029.1| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2889
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 159 KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVK 218
+S D + + +L+ Y+L +++ A K ++A + + A+ LG ++ +
Sbjct: 172 QSIDPKYTKSYISLARNYYLDFQIQDAIKSLKKAIEIEPNSVEAYERLGFVYQNEKNNSE 231
Query: 219 GKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
+ Y A++ D A +NL L +++ N + DS +C+ + I P + I +Y
Sbjct: 232 AIKYYKKAIEIDPNYYNAQFNLALIYQNQNNFDDSFQCYRRAIEIDPKQVDAYNNIGLIY 291
Query: 279 EITGDVEQASDVNENLL------LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 332
G +++A + + L +A N AL+ ++ EA +C + + I PS
Sbjct: 292 YYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQCYKKTIE-INPSFLK 350
Query: 333 NFSNGYNWCV 342
+ + + C+
Sbjct: 351 SLTRLGDICI 360
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 114/285 (40%), Gaps = 54/285 (18%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
++A L IY Q + E+A + E+A D A+ N+G ++ Y
Sbjct: 2568 ANAYIKLGNIYLKQIKYEKARECYEKAIEIDPKQVVAYNNIGLVYYNLKNDDLALSYYQK 2627
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
AL + I +LYN GLA++ N+ +LE ++K + P+ + L ++ L TG ++
Sbjct: 2628 ALQINPRYILSLYNSGLAYEMKNQNQKALEFYNKALEVDPNDVKTLTRMTQLLLKTGGID 2687
Query: 286 QA------SDVNENLLLEAV--RNDALSQLHREMKHEAEKC------------------- 318
+ SD N+ A+ S ++MK ++ KC
Sbjct: 2688 EPDVDNLLSDFGINVQKSAIDYYKQGYSYYTKKMKDQSIKCLNKAIEMDPNFFEAYDKLA 2747
Query: 319 -ILTSAKLIAPSIED---------NFSNGYN-----WCVQSIRNSAHSSLAQDLEI---- 359
I K++ +IE+ NF NGYN + + + + A + LEI
Sbjct: 2748 LIYEEKKMLDKAIENYRKAIEKNPNFINGYNKLGNIYLEKKMFDDAIVCYQKCLEIDPNY 2807
Query: 360 -----NKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIY 396
N+A+ + SQA+ K + D +A NL IY
Sbjct: 2808 YYGYYNQAIAYEEKQLDSQAIYCYKKAINIDPTGINAYINLGMIY 2852
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 108/270 (40%), Gaps = 24/270 (8%)
Query: 150 DVSQAVDVLKSCDEMTSSAATNLSFIYFLQG---------EVEQAEKMAEEACTADTYNS 200
++S+A V +S + N +I F ++E+A + + A D
Sbjct: 629 EISRASFVQESIKNYEDAVKLNPKYIQFYHSLGLLHSNINQMEEAMRYFQAAIELDPKYI 688
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
+++ LGN + Y K ++ AL+ D AL N GL + +LE F K
Sbjct: 689 NSYLELGNIYSGKAIYDKAQQCLEKALEIDQNSASALNNFGLFYFTQKMDDKALESFKKA 748
Query: 261 QAIVPSMPEVLYQIASLYEITGDVEQASDVNEN-LLLEAVRNDALSQLHREMKHEAEKC- 318
I P+ +Y +YE +++A + +N LL+ ALS++ + + + +
Sbjct: 749 LEINPNYELAIYNSGLVYESKNLIDKALECYKNVLLINPTDKKALSKIDQLNQKDGKNNV 808
Query: 319 ----ILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINK---------AVTF 365
IL A S +D + G+ + +Q + L + +E++ + +
Sbjct: 809 NLEEILQDANKNLKSAKDFYQQGFVYYIQRKDAKSIECLKKAIELDPKYFDAYDKLGLLY 868
Query: 366 LRMNDVSQAVDVLKSCDEMTSSAATNLSFI 395
+SQA++ K E+ + + I
Sbjct: 869 KEKKMISQAIESYKKAFEINPKYYSAIGII 898
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 156 DVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMARED 215
D ++ C ++ + IY Q +++A ++A D +A++ LGN + +
Sbjct: 1987 DSIQKC----ATTYYEMGIIYQRQNMIDEAISNYQKAIEQDPKYKSAYIQLGNSYLDKVQ 2042
Query: 216 YVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA 275
Y + E Y AL+ D + A N+GL + + + +LE ++K I P +Y
Sbjct: 2043 YDQAIECYKKALEIDPNDVIAYNNIGLIYYNQEKIDLALEYYNKAIEINPKYELPIYNSG 2102
Query: 276 SLYE 279
+YE
Sbjct: 2103 LIYE 2106
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 12/186 (6%)
Query: 114 FSNGYNWCVQSIRNSAHSSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKSCDEM 164
F G ++ Q++ + A + LEI N A+T+ + +++ L ++
Sbjct: 13 FKQGIDFQKQNMLDEAVECFKKVLEIDANNTEALYNLALTYQSKKLIDESLVYLNKVLDL 72
Query: 165 TSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
S A + + IY Q ++ A ++ D YN+ A LG A+ + +
Sbjct: 73 NPSHVNAYISKAGIYLEQKILDFAISCLKKVLEIDPYNANAHERLGFTYKAQNLIDQAIK 132
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
Y A++ D C EA +NLG+ ++ + +C+ K Q+I P + +A Y +
Sbjct: 133 CYKKAIEIDPNCTEAYHNLGIVYEGKGLIQQAYQCYLKAQSIDPKYTKSYISLARNYYLD 192
Query: 282 GDVEQA 287
++ A
Sbjct: 193 FQIQDA 198
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 134 AQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKMAE 190
+Q+ N + + + +V +A++ K E+ SA NL +Y Q E A K +
Sbjct: 450 SQEAHFNSGIAYSHLGNVKEALECYKKALEINPKFVSALINLGALYTNQKIYEDAIKCYQ 509
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEY 250
T + N NLG + + + + ++ D T + YN+G+A++
Sbjct: 510 TLLTIEENNLDGLNNLGYIYSQKNMFDEAINYFKKVIEIDPTYYLSYYNIGVAYESKQML 569
Query: 251 SDSLECFHKLQAIVPSMPEVLYQIASLY 278
++LE ++K++ + P V + ++Y
Sbjct: 570 DEALEYYNKVEEMSPKYFIVFVRQGNVY 597
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A++ LGN + + Y K E Y ++ + A N+GL H N+Y ++++ ++K
Sbjct: 2299 AYIELGNTYLNKIQYEKALECYNKIVEINPKQAVAYNNIGLVHFKQNKYDEAIQFYNKAL 2358
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRND--ALSQLHR----EMKHEA 315
+ P+ Y +YE ++A + N +L+ ND L+++ + + K+
Sbjct: 2359 EVDPNYDLSYYNSGLVYETKKMNDKALEC-YNKVLKINPNDKKTLTRIQKINENKDKNLE 2417
Query: 316 EKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEI 359
E I A I S +D F G + ++ I++ + L + +EI
Sbjct: 2418 EIEIDLKADKIPQSAKDYFIQGSTYFIKKIKDLSIDCLKKAIEI 2461
>gi|386875885|ref|ZP_10118036.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
gi|386806264|gb|EIJ65732.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
Length = 374
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 188 MAEEACTADT-YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKH 246
+ EE D+ YN G MA E + E++ AL D + IE L LG A H
Sbjct: 21 VKEETSIVDSDYNRKKLFKRGINLMADEKLEEAIEIFEQALRIDPSNIETLMKLGYARFH 80
Query: 247 LNEYSDSLECFHKLQAIVPSMPE 269
+++YS++L+ + ++ I + PE
Sbjct: 81 IDDYSEALKIYDRILDIDVTNPE 103
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
++E+A ++ E+A D N + LG +DY + ++Y LD D T EA +NL
Sbjct: 49 KLEEAIEIFEQALRIDPSNIETLMKLGYARFHIDDYSEALKIYDRILDIDVTNPEA-WNL 107
Query: 241 -GLAHKHLNEYSDSLECFHK 259
GL H YS +L+ K
Sbjct: 108 KGLVHYEQKNYSKALDAVQK 127
>gi|403216982|emb|CCK71477.1| hypothetical protein KNAG_0H00610 [Kazachstania naganishii CBS
8797]
Length = 973
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP----EVLYQIASLYEITGDVEQASDV 290
E + LG+ +KH N++ +LECF + PS P ++ +Q+ S+ E GD A D
Sbjct: 207 EIYFRLGIIYKHQNKWQQALECFRYILQQPPS-PLQEWDIWFQLGSVLESMGDWANARDA 265
Query: 291 NENLLLE 297
EN+L++
Sbjct: 266 YENVLVQ 272
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 311 DPSDATTWYHLGRVHMVRSDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 370
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 371 AYTRAIRLNPYISEVWYDLGTLYE 394
>gi|332221054|ref|XP_003259672.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Nomascus leucogenys]
Length = 914
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L F++ + P L+ A + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALRNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLL 658
>gi|225850059|ref|YP_002730293.1| hypothetical protein PERMA_0503 [Persephonella marina EX-H1]
gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
Length = 559
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 144 TFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEACTADTYNS 200
+L+ ND +A +VL +++ L+ IY Q E+A K ++A +
Sbjct: 139 VYLKKNDAEKAKEVLFKIAKISPKKPRVYYTLARIYLFQNNKEEAIKHLKKALEIEPLYQ 198
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
A+V LG + + + +++Y+ L+ D +EAL L + +++ + E +++
Sbjct: 199 PAYVLLGELYLQDRKFKEAEKVYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRI 258
Query: 261 QAIVPSMPEVLYQIASLY 278
I PS + L + LY
Sbjct: 259 VKIDPSNKDALLKKFLLY 276
>gi|113477968|ref|YP_724029.1| photosystem I assembly protein Ycf3 [Trichodesmium erythraeum
IMS101]
gi|110169016|gb|ABG53556.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 182
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLEC 256
A+ G A A +Y + E Y AL+ ND + I LYN+GL H E+ +LE
Sbjct: 46 AYYRDGMSAQADGEYAEALENYYEALNLEDDPNDRSYI--LYNIGLIHASNGEHDQALEY 103
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGD 283
+H+ P MP+ L IA ++ G+
Sbjct: 104 YHQALENNPRMPQALNNIAVIFHYRGE 130
>gi|356570865|ref|XP_003553604.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Glycine
max]
Length = 917
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V F D+ A+ + C ++ + A T+L L+G++ Q +
Sbjct: 221 NMGVIFKNRGDLESAITCYERCLTVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTLY 280
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K
Sbjct: 281 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDREN 340
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ +I P+ + L + +Y + G V+ A+ + E ++
Sbjct: 341 LDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKVDAAASMIEKAII 387
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 152 SQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FV 204
S+A+ V D + A T+ ++ +G + +A + ++A D +Y +AA
Sbjct: 97 SEAIKV----DPQNACALTHCGILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLT 152
Query: 205 NLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
++G + G + Y AL D A YNLG+ + + +Y +L + K +
Sbjct: 153 DIGTNIKLAGNTQDGIQKYFEALKVDPHYAPAYYNLGVVYSEMMQYDTALSFYEKAASER 212
Query: 265 PSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
P E + +++ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 213 PVYAEAYCNMGVIFKNRGDLESAITCYERCLTVSPNFEIAKNNMAIALTDLGTKVKLEGD 272
>gi|240254442|ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana]
gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION INDEPENDENCE 6 [Arabidopsis thaliana]
gi|330250911|gb|AEC06005.1| protein early flowering 8 [Arabidopsis thaliana]
Length = 1091
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 136 DLEINKAVTFLR-MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
DL+ N ++ + M+ + QA ++ C +SA L+ +F G+ E++ E A
Sbjct: 241 DLQANDSIGMRKGMDRMQQAFEIYPYC----ASALNYLANHFFFTGQHFLVEQLTETALA 296
Query: 195 ADTYN---SAAFVNLGNCAMAREDYVKGKELYVHAL----DNDATCIEALYNLGLAHKHL 247
T+ S +F NL ++ D+ K Y+ A+ +N + + LG L
Sbjct: 297 VTTHGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQVQLKL 356
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E S+ F K+ + P E L + LY G E+A
Sbjct: 357 GELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKA 396
>gi|168066691|ref|XP_001785267.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663137|gb|EDQ49919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 910
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Query: 162 DEMTSSAATNLSFIYFLQGEV-EQAEKMAEEACTADTYNSAA------FVNLGNCAMARE 214
D + A T+ +Y +G + E AE + T TY +A+ +LG
Sbjct: 86 DAQNACALTHCGMLYKEEGHLLEAAEAYRKALLTEPTYKAASENLAIVLTDLGTSLKLSG 145
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+G Y AL D+ A YNLG+ + + +Y +L C+ K A P E +
Sbjct: 146 HIQEGLTKYYDALKADSRYAPAYYNLGVVYSEMMQYDMALSCYEKAAANRPMYAEAYCNM 205
Query: 275 ASLYEITGDVEQA 287
+Y+ GD++ A
Sbjct: 206 GVIYKNRGDLDAA 218
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A T+L ++G + Q ++A + + + A NLG + +Y AL
Sbjct: 243 ALTDLGTKVKIEGYIHQGVAYYKKALLYNWHYADAMYNLGVAYGELLKFDMAVVMYELAL 302
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ C EA NLG+ +K + ++EC+ I P+ + L + +Y + G ++ A
Sbjct: 303 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALQIKPNFSQSLNNLGVVYTVQGKMDSA 362
Query: 288 SDVNENLLL------EAVRNDALSQLHREMKH------EAEKCIL 320
+ + E +L EA N L LHR+ + E+C+L
Sbjct: 363 AAMIEKAILANPSYAEAYNN--LGVLHRDAGNIPLAIDAYERCLL 405
>gi|222053746|ref|YP_002536108.1| Exostosin family protein [Geobacter daltonii FRC-32]
gi|221563035|gb|ACM19007.1| Exostosin family protein [Geobacter daltonii FRC-32]
Length = 794
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
NL Y G +++A+ + E D N+ + NL D EL+ AL +
Sbjct: 43 NLGLAYVESGRLDEAKVIFERFIALDPENAEPWNNLAVVVQMAGDLETATELFRKALALN 102
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
EA YNLG A + +SD++ C + + E + +A L+ +TG +
Sbjct: 103 PQYAEAWYNLGFALEEQRNWSDAITCNRRAILVRTDYAEAHFNLALLHLLTGKFHEG 159
>gi|197120080|ref|YP_002140507.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089440|gb|ACH40711.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 405
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 139 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
++ + + + D ++A LK S D + A L+ Y QG+ ++A K + +
Sbjct: 33 LSSGLGYYQKKDYARATGELKRAISMDPTNTQAYKFLASAYQAQGKTDEAIKTYKNSLAL 92
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + NLGN + ++ Y + + A + T A Y LG + Y ++
Sbjct: 93 DPTQDSIHTNLGNIYLQQKKYNLAEREFKDAAKLNPTDTLAPYTLGQLYVQTERYGEAET 152
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITG 282
F K+ + P+ P Y + ++Y G
Sbjct: 153 QFKKVSRMAPTDPNPYYSLGAVYNKEG 179
>gi|22299068|ref|NP_682315.1| photosystem I assembly protein Ycf3 [Thermosynechococcus elongatus
BP-1]
gi|31563253|sp|Q8DIQ6.1|YCF3_THEEB RecName: Full=Photosystem I assembly protein ycf3
gi|22295250|dbj|BAC09077.1| photosystem I assembly related protein [Thermosynechococcus
elongatus BP-1]
Length = 173
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLEC 256
A+ G A A +Y + E Y AL+ D + I LYN+GL H E+ +LE
Sbjct: 37 AYYRDGMSAQADGEYAEALENYQAALELEEDPTDRSYI--LYNIGLIHASNGEHEKALEY 94
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITG 282
+H+ + P MP+ L IA +Y G
Sbjct: 95 YHQALELNPRMPQALNNIAVIYHYLG 120
>gi|17979432|gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
Length = 740
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 136 DLEINKAVTFLR-MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
DL+ N ++ + M+ + QA ++ C +SA L+ +F G+ E++ E A
Sbjct: 241 DLQANDSIGMRKGMDRMQQAFEIYPYC----ASALNYLANHFFFTGQHFLVEQLTETALA 296
Query: 195 ADTYN---SAAFVNLGNCAMAREDYVKGKELYVHAL----DNDATCIEALYNLGLAHKHL 247
T+ S +F NL ++ D+ K Y+ A+ +N + + LG L
Sbjct: 297 VTTHGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQVQLKL 356
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E S+ F K+ + P E L + LY G E+A
Sbjct: 357 GELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKA 396
>gi|356505394|ref|XP_003521476.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Glycine
max]
Length = 919
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V F D+ A+ + C ++ + A T+L L+G++ Q +
Sbjct: 222 NMGVIFKNRGDLESAITCYERCLTVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTLY 281
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K
Sbjct: 282 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDREN 341
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
++EC+ +I P+ + L + +Y + G V+ A+ + E ++
Sbjct: 342 LDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKVDAAASMIEKAII 388
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 152 SQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FV 204
S+A+ V D + A T+ ++ +G + +A + ++A D +Y +AA
Sbjct: 98 SEAIKV----DPQNACALTHCGILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLT 153
Query: 205 NLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
++G + G + Y AL D A YNLG+ + + +Y +L + K +
Sbjct: 154 DIGTNIKLAGNTQDGIQKYFEALKVDPHYAPAYYNLGVVYSEMMQYDTALSFYEKAASER 213
Query: 265 PSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
P E + +++ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 214 PIYAEAYCNMGVIFKNRGDLESAITCYERCLTVSPNFEIAKNNMAIALTDLGTKVKLEGD 273
>gi|301059880|ref|ZP_07200771.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300446030|gb|EFK09904.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 206
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTS---SAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N V+ + + +A+ E + A NL +IYF QG++E+ ++A +
Sbjct: 30 NDGVSLMEQGKLDEAIGAFNDAIENSGRMFEAYVNLGYIYFKQGDLERVVYANQQAIEIE 89
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ + NLG + + + V A++ + I+A NL A+ +E ++E
Sbjct: 90 PRYARGYANLGFAYLQMLRTEEAIKALVIAIELNPEIIQAYSNLTNAYLQNDEIEKAIET 149
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
K+ A+ P L +AS Y GD +A
Sbjct: 150 GEKMVALAPEFALGLNNLASAYYNKGDYAKA 180
>gi|288817541|ref|YP_003431888.1| TPR repeat protein [Hydrogenobacter thermophilus TK-6]
gi|384128307|ref|YP_005510920.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|288786940|dbj|BAI68687.1| TPR repeat protein [Hydrogenobacter thermophilus TK-6]
gi|308751144|gb|ADO44627.1| TPR repeat-containing protein [Hydrogenobacter thermophilus TK-6]
Length = 142
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D +T+ NL +IY +GE++ A++ E+A D A NLGN EDY K +
Sbjct: 25 DPLTAEEHLNLGYIYERKGELKPAKEEYEKALQKDKNMWKAHFNLGNVYAKMEDYAKAER 84
Query: 222 LYVHALDNDATCIEALYNLG 241
Y AL+ + L NL
Sbjct: 85 EYKRALELKPNDPDILNNLA 104
>gi|289207918|ref|YP_003459984.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio
sp. K90mix]
gi|288943549|gb|ADC71248.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio
sp. K90mix]
Length = 256
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 119 NWCVQSIRNSAHSSLAQDLEINK--AVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLS 173
C A+ E+N + +LR +V QA LK E A ++
Sbjct: 19 GGCAAMAEREVTGERAEAAEVNAELGIGYLREGEVDQAERNLKRALEFDPGHPLANLGMA 78
Query: 174 FIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN---D 230
+Y +G +++AE+ A D N +LG RE + + +EL+ A+DN D
Sbjct: 79 NVYERRGALDRAEEHYRRALRRDDGNPYVQTSLGALLCRREAFDEAQELFARAIDNPDYD 138
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
I AL N G+ + + E + I P P L ++ASL
Sbjct: 139 QREI-ALMNSGVCFADAGQTERAEEKLREALRINPQYPRALLEMASL 184
>gi|380797473|gb|AFE70612.1| transmembrane and TPR repeat-containing protein 3, partial [Macaca
mulatta]
Length = 718
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 346 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 405
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 406 NLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 462
>gi|332705951|ref|ZP_08426024.1| hypothetical protein LYNGBM3L_13240 [Moorea producens 3L]
gi|332355211|gb|EGJ34678.1| hypothetical protein LYNGBM3L_13240 [Moorea producens 3L]
Length = 173
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 25/147 (17%)
Query: 207 GNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
G A A +Y + + Y AL+ ND + I +YN+GL E+ +LE +H+
Sbjct: 42 GMSAQADGEYAEAMDNYKKALELEEDPNDRSFI--IYNMGLIQASNGEHERALELYHQAL 99
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILT 321
I P MP+ L +A +Y G EQ + ++ EA+ + A R ++
Sbjct: 100 DINPRMPQALNNVAVIYHYQG--EQLKEAGDSEAAEALYDKAADYWKRAIR--------- 148
Query: 322 SAKLIAPSIEDNFSNGYNWCVQSIRNS 348
+AP +N+ NW + R++
Sbjct: 149 ----LAP---NNYIEAQNWLKTTGRST 168
>gi|392426317|ref|YP_006467311.1| tetratricopeptide repeat protein [Desulfosporosinus acidiphilus
SJ4]
gi|391356280|gb|AFM41979.1| tetratricopeptide repeat protein [Desulfosporosinus acidiphilus
SJ4]
Length = 395
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 137 LEINKAVTFLRMNDVSQAVDVLKSCD----EMTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
L+ N+ +++ +A D L++ D E ++ ++ L+ Y QG + QA+ EEA
Sbjct: 61 LKRNEIEQLIKVQAFQEARDYLETLDRKEHEESALISSLLARCYLGQGLIVQAKSAIEEA 120
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEA----LYNLGLAHKHLN 248
N + L +C + + D+ +G V ALD Y LG+ + +
Sbjct: 121 IKLKPQNGGYWEILADCHLEQGDWKEG----VKALDKSCRAEPKNAVIYYRLGIIYAYHE 176
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD----VEQASD 289
EY ++L CF + P + +S +E+ G+ +EQ SD
Sbjct: 177 EYQEALRCFQGCCQLEP-------RESSYWEVKGEMHLKLEQLSD 214
>gi|428319705|ref|YP_007117587.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428243385|gb|AFZ09171.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 1339
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFI---YFLQGEVEQAEKMAEEA 192
D E+NK V ++++ V +S SAA NL + + +G++++A + ++A
Sbjct: 1124 DGEVNKIV-----KELTREVKSPQSDPAQNQSAAINLRELAESFLAEGKLDEAVSVCKQA 1178
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
+ LGN A+ ++ + K Y A++ + L NLG ++ +
Sbjct: 1179 LDIQPKFALGCKTLGNVFQAKGEFEEAKRWYTQAIEIQPDFAQGLANLGTVCAQQQQWPE 1238
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
++ + K AI P+ +A ++ G E A+D
Sbjct: 1239 AIAAYQKAIAIQPNFAGFYRNLARVFSQIGKPEDAAD 1275
>gi|268315734|ref|YP_003289453.1| hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 465
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNL 206
R D +D L + S A + G E+A + E A + + ++ VNL
Sbjct: 53 RFEDALGVIDRLLALHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNL 112
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G + + + Y AL D E YNLG+ + ++ ++++ + + P
Sbjct: 113 GITLDNLGRFEEALQAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPD 172
Query: 267 MPEVLYQIASLYEITGDVEQA 287
PEV Y++ Y+ GD E++
Sbjct: 173 HPEVWYELGFCYDRLGDDERS 193
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 3/151 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N +T RM+ + +AV L+ + L F Y G+ E++ + D
Sbjct: 145 NLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELD 204
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
Y++ A+ N G Y + E Y +A+ A YN G A +L + ++E
Sbjct: 205 PYSADAWYNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIES 264
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ K+ I P Y IA YE + E A
Sbjct: 265 YEKVLEIEGGDPATYYNIALAYEELQEYETA 295
>gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Length = 923
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 123 QSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAV-DVLKSCD--EMTSSAATNLSFIYFLQ 179
++IR + +LA +N+ F D +A+ D +S + +A N F +
Sbjct: 644 EAIRLAPDHALAH---LNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCL 700
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVN-------LGNCAMAREDYVKGKELYVHALDNDAT 232
G+ ++ +A D + +A+ N LG A A EDY + + L DA+
Sbjct: 701 GQFARSIPDFTQAIALDPEDGSAYANRAFALHSLGAVAQAIEDYTQA----LQRLGRDAS 756
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVN 291
YN G+AH+ ++ +++ F + I PS +A + GD+E+A +D+N
Sbjct: 757 TY---YNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAVNLAVCRQAVGDLERALADLN 813
Query: 292 ENLLLE 297
E + L+
Sbjct: 814 EAIRLD 819
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D SA N F Y L+GE E+A + +EA ++ A +N G A+ D+ +
Sbjct: 615 DPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIA 674
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
+ +++ + A YN G A L +++ S+ F + A+ P
Sbjct: 675 DFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDP 718
>gi|302039603|ref|YP_003799925.1| hypothetical protein NIDE4340 [Candidatus Nitrospira defluvii]
gi|300607667|emb|CBK44000.1| conserved exported protein of unknown function, TPR-like
[Candidatus Nitrospira defluvii]
Length = 227
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 160 SCDEMTSSAATNLSFIYFLQGEVEQAEKM-------AEEACTADTYNSAAFVNLGNCAMA 212
+C + T AA +G+ EQAEK+ AEE D + +L A
Sbjct: 19 ACGQQTWEAAMQAGESALQRGQYEQAEKIFSAAVPKAEEFGLHDRRVAVTLAHLAQAYSA 78
Query: 213 REDYVKGKELYVHAL--------DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI- 263
+ +V+ + +Y+ AL + L NLG+ H+ +Y+D+ + +I
Sbjct: 79 QGKFVEAEPVYLEALKIYQDVHGETHLDVAAMLNNLGVLHRKHGQYADAQRLLTRALSIK 138
Query: 264 ----VPSMPEV---LYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLH 308
P PEV L +A++Y GD EQA + L AVR L H
Sbjct: 139 EKLLGPDHPEVALALSNLAAMYLAQGDGEQAGALFARAL--AVREKHLGPDH 188
>gi|418735693|ref|ZP_13292103.1| stage II sporulation protein E [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410748827|gb|EKR01721.1| stage II sporulation protein E [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 1060
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 161 CDEMTSSA-----ATNLSFIY------FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC 209
DEM +S A N IY + G+++QA ++ + T DT N LG
Sbjct: 894 LDEMFTSGDRIDVALNPDMIYEDAKQLYKNGKIDQALELLKTGYTNDTANQKINKLLGLL 953
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
+ +DY E+ + L D E + L +A+K + +Y +LE KL I P
Sbjct: 954 SFKGKDYTTAIEVLNNYLKTDPGLHEYWFYLSIANKKVGKYEQALEASLKLNDIQPDNLS 1013
Query: 270 VLYQIASLYEITGDVEQASDVNENLL 295
L ++ +Y + + A V L+
Sbjct: 1014 NLVNLSDIYRLMDQFDLAEKVARKLI 1039
>gi|389581569|ref|ZP_10171596.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
gi|389403204|gb|EIM65426.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
Length = 334
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 161 CDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGK 220
D SA NL F+ G E+A + + A N A+ NLG E + + +
Sbjct: 40 VDRNHVSALNNLGFLLIETGAFEEAVLLLQRAIGVVPENEDAYNNLGLAYFQLEQHERAQ 99
Query: 221 ELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEI 280
+ A+ + + A +NLG+ ++ + +++ + P PE LY +A Y
Sbjct: 100 RAFETAIRYNPSHHSASFNLGVLYQSRGNWGAAVDTYKNHLRNHPRHPEALYNLAVAYNA 159
Query: 281 TGDVEQA 287
G ++QA
Sbjct: 160 LGMLDQA 166
>gi|398342815|ref|ZP_10527518.1| hypothetical protein LinasL1_07018 [Leptospira inadai serovar Lyme
str. 10]
Length = 689
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 134 AQDLEINKAV--TFLRMNDVSQAVDVLKSCDEMTSSAATNLSFI------YFLQGEVEQA 185
A D EI +++ +F ++N Q++D L + + NL + Y+ +G++ A
Sbjct: 342 ASDPEIFRSIADSFEQLNQGEQSIDALHKGLKYNPN---NLDLLFQLAETYYNRGDLLAA 398
Query: 186 EKMAE---EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+ ++ D++ A +NLG E Y + LD + +A YNLGL
Sbjct: 399 EETYRRIVDSTPGDSFTETALINLGVILDQMERYGEAVTYLNRVLDINPKNAKAYYNLGL 458
Query: 243 AHKHLNEYSDSLECFHKLQAIVPS 266
+KH S+E F K + P+
Sbjct: 459 VYKHTGNGVQSIENFRKSAYLDPT 482
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 6/152 (3%)
Query: 145 FLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAE---KMAEEACTADTY 198
F +ND A+D K S NL+ YF +GE+ QAE K+
Sbjct: 216 FNEINDPDAAIDAYKRGLSTAPDDPYLTYNLAVSYFKKGELPQAEEQFKLVILKSRGGKL 275
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
++ + LGN R DY + + A +ALYNL + K + ++L+
Sbjct: 276 SALSNAYLGNITYNRGDYGSAEHYFREAATLSPNDAKALYNLSVVLKKNGKMEEALKYLE 335
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ S PE+ IA +E EQ+ D
Sbjct: 336 MAKLAGASDPEIFRSIADSFEQLNQGEQSIDA 367
>gi|418721309|ref|ZP_13280493.1| stage II sporulation protein E [Leptospira borgpetersenii str. UI
09149]
gi|410742376|gb|EKQ91125.1| stage II sporulation protein E [Leptospira borgpetersenii str. UI
09149]
Length = 1060
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 161 CDEMTSSA-----ATNLSFIY------FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC 209
DEM +S A N IY + G+++QA ++ + T DT N LG
Sbjct: 894 LDEMFTSGDRIDVALNPDMIYEDAKQLYKNGKIDQALELLKTGYTNDTANQKINKLLGLL 953
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
+ +DY E+ + L D E + L +A+K + +Y +LE KL I P
Sbjct: 954 SFKGKDYTTAIEVLNNYLKTDPGLHEYWFYLSIANKKVGKYEQALEASLKLNDIQPDNLS 1013
Query: 270 VLYQIASLYEITGDVEQASDVNENLL 295
L ++ +Y + + A V L+
Sbjct: 1014 NLVNLSDIYRLMDQFDLAEKVARKLI 1039
>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
Length = 356
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 158 LKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYV 217
L S D + A N+ FL G+V++A ++A + + +A++NL N Y
Sbjct: 52 LLSIDSVNVQALVNIGSTLFLMGKVDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYD 111
Query: 218 KGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
+ E Y +++ I+A +LGLA + L +Y +++E + + P E +AS+
Sbjct: 112 EAIEGYKKSIEISPDNIDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVNVASV 171
Query: 278 Y 278
Y
Sbjct: 172 Y 172
>gi|431892102|gb|ELK02549.1| Transmembrane and TPR repeat-containing protein 3 [Pteropus alecto]
Length = 914
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F+ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNHALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|365982149|ref|XP_003667908.1| hypothetical protein NDAI_0A05100 [Naumovozyma dairenensis CBS 421]
gi|343766674|emb|CCD22665.1| hypothetical protein NDAI_0A05100 [Naumovozyma dairenensis CBS 421]
Length = 1007
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 45/84 (53%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D+ ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 307 DSQDATTWYHLGRVHMIRNDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 366
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 367 AYTRAIRLNPYISEVWYDLGTLYE 390
>gi|294085271|ref|YP_003552031.1| hypothetical protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664846|gb|ADE39947.1| Tetratricopeptide TPR_2 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 560
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A L I + G VEQAE +EA + ++ + A + G A ++ K K + AL
Sbjct: 209 ALMRLGVINYNAGNVEQAEYHLDEALSINSNSKWALLWKGVIASDGREFEKSKRHFSEAL 268
Query: 228 DNDATCIEALYNLGLAH--KHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
D D A YNLG A+ +Y ++ + F K ++ P E Y + ++
Sbjct: 269 DIDPRFDMAHYNLGWAYLGAKKKDYENAEKSFRKALSLNPDFKEAFYGLGMVF 321
>gi|170757588|ref|YP_001780767.1| hypothetical protein CLD_3425 [Clostridium botulinum B1 str. Okra]
gi|429247232|ref|ZP_19210494.1| hypothetical protein CFSAN001628_019895 [Clostridium botulinum
CFSAN001628]
gi|169122800|gb|ACA46636.1| tetratricopeptide repeat family protein [Clostridium botulinum B1
str. Okra]
gi|428755743|gb|EKX78352.1| hypothetical protein CFSAN001628_019895 [Clostridium botulinum
CFSAN001628]
Length = 303
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
+++ +Y GE E+AEK +E + +S AF L +E Y K +LY A++ D
Sbjct: 47 DMALVYDELGEYEKAEKKYKEILKVNPKDSRAFYGLAIIYDNKEQYKKAIKLYEKAIEYD 106
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
A + L A+ ++ E +++C+ K+ ++ ++S+YE G +E+A +
Sbjct: 107 KNYNRAYFFLAGAYDNVGEKEKAIKCYEKVISLDEKDFWSYVNLSSIYEEVGFLEKALCL 166
Query: 291 NENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAH 350
+ LE N + ++ + ++ + + SIEDN N ++
Sbjct: 167 ADK-ALELYPNHYMPLFNKGVVYKKLNKLEEAISNYKLSIEDN------------ENYSY 213
Query: 351 SSLAQDLEINKAVTFLRMNDVSQAVDVL 378
S L N AV + + D +A++++
Sbjct: 214 SYL------NLAVIYKELKDYKKAINII 235
>gi|222619750|gb|EEE55882.1| hypothetical protein OsJ_04532 [Oryza sativa Japonica Group]
Length = 885
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N A ++ D ++A K C+ A NL +Y + G + A + A A
Sbjct: 211 NIAGLLMQWGDFNKAALYYKEAIKCNPAFYDAHLNLGNLYKVTGMRQDAIVCFQNAARAK 270
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
N+ A+ NLGN + Y A+ +++ +EA NLG A K +++ C
Sbjct: 271 PENAVAYGNLGNAYHEQGQLDLAILSYRQAIHCNSSYVEAYNNLGNALKDAGRNEEAISC 330
Query: 257 FHKLQAIVPSMPEVLYQIASLY 278
+ A+ PS P+ L + ++Y
Sbjct: 331 YQTCLALQPSHPQALTNLGNVY 352
>gi|421095525|ref|ZP_15556238.1| stage II sporulation protein E [Leptospira borgpetersenii str.
200801926]
gi|410362235|gb|EKP13275.1| stage II sporulation protein E [Leptospira borgpetersenii str.
200801926]
Length = 1060
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 161 CDEMTSSA-----ATNLSFIY------FLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC 209
DEM +S A N IY + G+++QA ++ + T DT N LG
Sbjct: 894 LDEMFTSGDRIDVALNPDMIYEDAKQLYKNGKIDQALELLKTGYTNDTANQKINKLLGLL 953
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
+ +DY E+ + L D E + L +A+K + +Y +LE KL I P
Sbjct: 954 SFKGKDYTTAIEVLNNYLKTDPGLHEYWFYLSIANKKVGKYEQALEASLKLNDIQPDNLS 1013
Query: 270 VLYQIASLYEITGDVEQASDVNENLL 295
L ++ +Y + + A V L+
Sbjct: 1014 NLVNLSDIYRLMDQFDLAEKVARKLI 1039
>gi|329942368|ref|ZP_08291178.1| tetratricopeptide repeat family protein [Chlamydophila psittaci
Cal10]
gi|332287010|ref|YP_004421911.1| hypothetical protein CPSIT_0060 [Chlamydophila psittaci 6BC]
gi|384450146|ref|YP_005662746.1| type III secretion chaperone, putative [Chlamydophila psittaci 6BC]
gi|384451157|ref|YP_005663755.1| hypothetical protein CPS0A_0062 [Chlamydophila psittaci 01DC11]
gi|384452133|ref|YP_005664730.1| hypothetical protein CPS0D_0060 [Chlamydophila psittaci 08DC60]
gi|384453107|ref|YP_005665703.1| hypothetical protein CPS0C_0061 [Chlamydophila psittaci C19/98]
gi|384454086|ref|YP_005666681.1| hypothetical protein CPS0B_0062 [Chlamydophila psittaci 02DC15]
gi|392376263|ref|YP_004064041.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|407453535|ref|YP_006732643.1| hypothetical protein B595_0065 [Chlamydia psittaci 84/55]
gi|313847606|emb|CBY16594.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325506936|gb|ADZ18574.1| tetratricopeptide repeat protein [Chlamydophila psittaci 6BC]
gi|328815278|gb|EGF85266.1| tetratricopeptide repeat family protein [Chlamydophila psittaci
Cal10]
gi|328914240|gb|AEB55073.1| type III secretion chaperone, putative [Chlamydophila psittaci 6BC]
gi|334691888|gb|AEG85107.1| tetratricopeptide repeat protein [Chlamydophila psittaci C19/98]
gi|334692867|gb|AEG86085.1| tetratricopeptide repeat protein [Chlamydophila psittaci 01DC11]
gi|334693843|gb|AEG87060.1| tetratricopeptide repeat protein [Chlamydophila psittaci 02DC15]
gi|334694822|gb|AEG88038.1| tetratricopeptide repeat protein [Chlamydophila psittaci 08DC60]
gi|405780294|gb|AFS19044.1| tetratricopeptide repeat family protein [Chlamydia psittaci 84/55]
Length = 335
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAEQRLKETLELDPTAALAYCYLGIIALESGRTSEALTWCTKGLESEPGDSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y +++ECF K+
Sbjct: 79 LRYCYGVALDRDNRCEEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYIEAIECFDKIL 138
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ LY A
Sbjct: 139 ELDPWNPQSLYNKA 152
>gi|326431610|gb|EGD77180.1| hypothetical protein PTSG_08273 [Salpingoeca sp. ATCC 50818]
Length = 693
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 54/195 (27%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEA-------------CTADTYNSAAFVNLGNCAMAREDYV 217
NL Y +GE ++A + E+A TADTYN NLGN + DY
Sbjct: 317 NLGIAYDSKGEYDKAVEFYEKALAIMVETLGEKHPSTADTYN-----NLGNTYDRKGDYD 371
Query: 218 KGKELYVHAL--------DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV----- 264
+ ELY AL + + + NLG+A+ +Y ++ K AI
Sbjct: 372 RAIELYEKALAIYVETLGEKHPSTADTYGNLGIAYHSKGDYDRAIHFHEKDLAITVEALG 431
Query: 265 ---PSMPEVLYQIASLYEITGD-------VEQASDVNENLL-------------LEAVRN 301
PS + + I L++ G+ V+QA DV L L +R
Sbjct: 432 EKHPSTAQTYFNIGLLHDKRGEKERACAYVQQALDVFTTTLGTDHPNTRKAERNLGRIRG 491
Query: 302 DALSQLHREMKHEAE 316
A+++ H +H +E
Sbjct: 492 GAVNRQHASTQHVSE 506
>gi|399155369|ref|ZP_10755436.1| hypothetical protein SclubSA_00435 [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 193
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 192 ACTADT--YNSA-AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
ACT + + SA + + GN A+ DY Y A+ D+ YNLGL + +
Sbjct: 24 ACTDEVQIHKSALRYYSEGNEALKHRDYQIAIWNYQKAISLDSETPNFHYNLGLTYYEIG 83
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIA 275
YS+S++ F +++++VP+ + Y +A
Sbjct: 84 NYSESIDSFKRVESLVPNQTDTYYNLA 110
>gi|193084020|gb|ACF09694.1| TPR-repeat protein [uncultured marine crenarchaeote AD1000-202-A2]
Length = 272
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
L+ L ND+ I ALYNLGLA L +Y D++ CF K+ I P
Sbjct: 32 LFKKILKNDSKNILALYNLGLALNQLKKYQDAITCFEKITIIDPK 76
>gi|168701390|ref|ZP_02733667.1| TPR domain protein [Gemmata obscuriglobus UQM 2246]
Length = 675
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 45/106 (42%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
A TNL+ I +G+ ++AE++ E+ AD NL N Y
Sbjct: 38 PPALTNLAAIVAQRGDADEAERLYLESLGADPDQLNTHFNLANLYRRTGRSADAIPHYED 97
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVL 271
AL L NLGLA + + S+ECF + + P +PE L
Sbjct: 98 ALRLSPDAPAVLVNLGLAAGDVGNWPRSVECFARAVTVNPDVPEGL 143
>gi|427727769|ref|YP_007074006.1| hypothetical protein Nos7524_0498 [Nostoc sp. PCC 7524]
gi|427363688|gb|AFY46409.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 173
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 207 GNCAMAREDYVKGKELYVHAL-----DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
G A A +Y + E Y AL ND I LYN+GL + +++ +LE +H+
Sbjct: 42 GMSAQAEGEYAEALEYYEEALTLEEDPNDRGYI--LYNMGLIYASNGDHNKALELYHQAI 99
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKH------EA 315
+ P +P+ L IA +Y G E+A + +N EA+ + A R ++ EA
Sbjct: 100 ELNPRLPQALNNIAVIYHYKG--EKAKEDGDNDGGEALFDQAADYWIRAIRMAPNNYIEA 157
Query: 316 EKCILTSAKL 325
+ + T+ ++
Sbjct: 158 QNWLKTTGRM 167
>gi|344267608|ref|XP_003405658.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
repeat-containing protein 3-like [Loxodonta africana]
Length = 926
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 552 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 611
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L + +++L+ F+ + P L+ A L + +G+V+ + + LL
Sbjct: 612 NLAIVHIELKDPNEALKNFNHALGLNPKHKLALFNSAILMQESGEVKLRPEARKRLL 668
>gi|190346149|gb|EDK38165.2| hypothetical protein PGUG_02263 [Meyerozyma guilliermondii ATCC
6260]
Length = 502
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 178 LQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
Q ++ QA K + D ++ ++ LG M R D+ E + A++ D+
Sbjct: 263 FQQDLTQALKYLSSSLEIDQSDAHSWYYLGRVHMLRGDFNAAYEAFQQAVNRDSRNPTFW 322
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
++G+ + +++Y D+L+ + + + P + EV Y + +LYE
Sbjct: 323 CSIGVLYYQISQYRDALDAYTRAIRLNPYISEVWYDLGTLYE 364
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVP---SMPEVLYQIASLYEITGDVEQASDVN 291
E + LG+ +KH + +LECF + A P + P+V +QI S+ E D A +
Sbjct: 169 EIYFRLGIIYKHQGKLQSALECFQYILASPPQPLTQPDVWFQIGSVLEQQKDWNGAKEAY 228
Query: 292 ENLL 295
E +L
Sbjct: 229 ERVL 232
>gi|322421635|ref|YP_004200858.1| hypothetical protein GM18_4167 [Geobacter sp. M18]
gi|320128022|gb|ADW15582.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 406
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 3/152 (1%)
Query: 139 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
++ T+ + D S+A K S D + + L+ Y Q + + A K + T
Sbjct: 33 LSSGATYYQKKDYSRASSEFKRAISLDPTNAQSYNYLANAYLAQKKYDDAIKTYRNSLTL 92
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + NLGN + ++ Y ++ + A + T A Y LG + Y+++
Sbjct: 93 DPTQDSVHTNLGNIYLQQKKYNLAEKEFKAAAKLNPTDTLAPYTLGQLYLQTGRYAEAET 152
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
F K+ + P+ P Y + + Y G +A
Sbjct: 153 QFKKVSKMAPTDPNPYYSLGATYNKEGKYAEA 184
>gi|395820112|ref|XP_003783419.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Otolemur garnettii]
Length = 915
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F+ + P L+ A L + +G+V+ + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNHALELNPKHKLALFNSAILMQESGEVKLRPEARRRLL 658
>gi|170077429|ref|YP_001734067.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
gi|169885098|gb|ACA98811.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
Length = 714
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 3/152 (1%)
Query: 141 KAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
KA LR + A++ L + D A +I+ + E +A ++A D
Sbjct: 438 KARIHLRREETDAALNSLGALLRLDSQQVWAWFEKGWIHHNRAEYNEAIAAYQQALKLDD 497
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
N+ + GN + Y + K YV ++ + A Y+LG+A ++L Y ++ + F
Sbjct: 498 QNANIWYQQGNSYSKLQRYREAKNAYVRVVELEPDRAPAWYSLGMAQENLRNYPEAQDAF 557
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+ + P+ Y +A E GD A D
Sbjct: 558 ANVTRLEPNNDRAWYHLAWNAEQNGDRPTAID 589
>gi|428214933|ref|YP_007088077.1| Flp pilus assembly protein TadD [Oscillatoria acuminata PCC 6304]
gi|428003314|gb|AFY84157.1| Flp pilus assembly protein TadD [Oscillatoria acuminata PCC 6304]
Length = 348
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 160 SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
S D S+A L F Q +VE+A +A D N++A+ NLGN R+ + +
Sbjct: 49 SQDANNSAAHIWLGLSLFYQDKVEEAIAQYRQALALDPNNASAYNNLGNAYTDRQQHEEA 108
Query: 220 KELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
Y AL + + +NLG+A + +++ + + A+ P+ E +IA+L
Sbjct: 109 IAAYEQALRLNPDQGQTYFNLGVALTAVRRGDEAIAAYRRAVALDPNDAEAQVKIANL 166
>gi|425447216|ref|ZP_18827207.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732284|emb|CCI03758.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 605
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEMTSSAATNL----SFIYFLQGEVEQAEKMAEEACTAD 196
+ + + D +A+ E+ A + SF Y L+ E ++A K +A +
Sbjct: 425 RGYVYYDLKDYEKAIKDYNKAIEINPQNADSYYLRGSFYYILK-EYDKAIKDYNKAIEIN 483
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
N+ A+ N G ++Y K + Y AL+ + +A Y G + HL EY +++
Sbjct: 484 PQNAIAYNNRGYVYHNLKEYDKAIKDYNKALEINPQYADAYYTRGNVYLHLKEYDKAIKD 543
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENL 294
++K I P + +YEI D E+A D N+ L
Sbjct: 544 YNKAIEINPQYADAYNNRGVVYEILKDYEKAIKDYNKAL 582
>gi|374813455|ref|ZP_09717192.1| hypothetical protein TpriZ_06262 [Treponema primitia ZAS-1]
Length = 639
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 10/162 (6%)
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
+EA D N +LG DY ++ + + + A YNLG + L +
Sbjct: 277 KEAVRLDPKNYIYSYDLGRAYFTNRDYASARQYFENTTTLNRNFESAWYNLGGTFRALGQ 336
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL------LEAVRNDA 303
SD+L + + + P P +I + GD A+D L L +VR
Sbjct: 337 PSDALTAYRRAVGVKPDYPTAHREIGRILAAQGDPRGAADAFTKALQYAPNDLASVRELG 396
Query: 304 LSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSI 345
++Q+ AE AK + S +D+ +N YN V I
Sbjct: 397 VAQMASGDFVSAEASF---AKALKSSPKDDQTN-YNMAVVKI 434
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLK-SCDEMTSSA--ATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N AV + + ++A+D K + D S+A A L Y G+ E A A + D
Sbjct: 428 NMAVVKINQDKGAEALDYAKQAMDTAPSNAVYAYTLGLAYEATGDFEGAVAAYGRAVSLD 487
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+NLG+ +A + L A + + E NLG A+ L ++ S+E
Sbjct: 488 GTYIRPRINLGSLYLANGFSEQAVNLLSAAYNQEPRSFEVNNNLGSAYARLEQWPQSVEH 547
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ K P+ P V +A +GD+++A D
Sbjct: 548 YEKALQSEPNNPTVRINLARALAGSGDLQKARDA 581
>gi|195126359|ref|XP_002007638.1| GI13051 [Drosophila mojavensis]
gi|193919247|gb|EDW18114.1| GI13051 [Drosophila mojavensis]
Length = 1205
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 198 NVRIGMAHCFLKMGNAEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 257
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 258 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 317
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 318 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 367
>gi|157879372|pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879373|pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 91
Score = 43.5 bits (101), Expect = 0.18, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
++ A NL Y+ QG+ ++A + ++A D N+ A+ NLGN + DY + E Y
Sbjct: 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67
Query: 225 HALDNDATCIEALYNLGLAHK 245
AL+ D EA NLG A +
Sbjct: 68 KALELDPNNAEAKQNLGNAKQ 88
Score = 42.0 bits (97), Expect = 0.64, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 196 DTYNSA-AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
D NSA A+ NLGN + DY + E Y AL+ D EA YNLG A+ +Y +++
Sbjct: 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAI 63
Query: 255 ECFHKLQAIVPSMPE 269
E + K + P+ E
Sbjct: 64 EYYQKALELDPNNAE 78
>gi|406591862|ref|YP_006739042.1| hypothetical protein B711_0064 [Chlamydia psittaci CP3]
gi|406594486|ref|YP_006741199.1| hypothetical protein B599_0062 [Chlamydia psittaci MN]
gi|407457601|ref|YP_006735906.1| hypothetical protein B601_0060 [Chlamydia psittaci WS/RT/E30]
gi|410858038|ref|YP_006973978.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|405782918|gb|AFS21666.1| tetratricopeptide repeat family protein [Chlamydia psittaci MN]
gi|405785579|gb|AFS24325.1| tetratricopeptide repeat family protein [Chlamydia psittaci
WS/RT/E30]
gi|405787734|gb|AFS26477.1| tetratricopeptide repeat family protein [Chlamydia psittaci CP3]
gi|410810933|emb|CCO01576.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
Length = 335
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAEQRLKETLELDPTAALAYCYLGIIALESGRTSEALTWCTKGLESEPGDSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y +++ECF K+
Sbjct: 79 LRYCYGVALDRDNRCEEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYIEAIECFDKIL 138
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ LY A
Sbjct: 139 ELDPWNPQSLYNKA 152
>gi|357162940|ref|XP_003579571.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 983
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A++ +SC + ++ A TNL IY A + A + ++ F NL
Sbjct: 347 VEEAINCFQSCLILQANHPQALTNLGNIYMEWNMASAAASFYKAAIAVTSGLTSPFNNLA 406
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ Y Y L D T +AL N G K +++++ + + I+P+M
Sbjct: 407 VIYKQQGSYADAIACYTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYMQAATIMPTM 466
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G+ E A
Sbjct: 467 AEAHANLASAYKDSGNQESA 486
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 20/202 (9%)
Query: 93 HEAEKCILTSAKLIAPSIEDNFSN-------------GYNWCVQSIRNSAHSSLAQDLEI 139
H+A +C A ++ P + D SN Y +++IR H ++A
Sbjct: 178 HDAAQCC-RQALILNPRLVDAHSNLGNLMKAQGFVEEAYTCYLEAIRIDPHFAIAWS--- 233
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N A F+ + D+++A+ K ++ S A N +Y G +E+A + A A
Sbjct: 234 NLAGLFMEVGDLNKAMQYYKEAVKLNPSFADAHLNQGNVYKAMGMLEEAIACYQRALQAR 293
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ A+ NL + Y A+ D +EA N+G A K +++ C
Sbjct: 294 PDYAMAYGNLATIYYEQRQLDMSIHCYSQAILCDPRFVEAHNNMGNALKDAGRVEEAINC 353
Query: 257 FHKLQAIVPSMPEVLYQIASLY 278
F + + P+ L + ++Y
Sbjct: 354 FQSCLILQANHPQALTNLGNIY 375
>gi|440682728|ref|YP_007157523.1| Photosystem I assembly protein ycf3 [Anabaena cylindrica PCC 7122]
gi|428679847|gb|AFZ58613.1| Photosystem I assembly protein ycf3 [Anabaena cylindrica PCC 7122]
Length = 173
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 207 GNCAMAREDYVKGKELYVHAL-----DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
G A A +Y + + Y AL ND + I LYN+GL + +++ +LE +H+
Sbjct: 42 GMSAQAEGEYAEALDYYEEALTLEEDSNDQSYI--LYNMGLIYASNGDHTKALEYYHQAI 99
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKH------EA 315
+ P +P+ L IA +Y G E+A + +N EA+ + A R ++ EA
Sbjct: 100 ELNPRLPQALNNIAVIYHFQG--EKAKEEGDNDAGEALFDQAADYWIRAVRMAPNNYIEA 157
Query: 316 EKCILTSAK 324
+ + T+ +
Sbjct: 158 QNWLKTTGR 166
>gi|225570791|ref|ZP_03779814.1| hypothetical protein CLOHYLEM_06894 [Clostridium hylemonae DSM
15053]
gi|225160253|gb|EEG72872.1| hypothetical protein CLOHYLEM_06894 [Clostridium hylemonae DSM
15053]
Length = 175
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
Y +G+ ++A + E+A AD AF +G +EDY ++ + ALDN A
Sbjct: 31 YLEKGKYKEAAEQFEKAVEADRNVGDAFRGIGMAKWEQEDYEGARDAFKEALDNGAEKTG 90
Query: 236 ALYN-LGLAHKHLNEYSDSLECFH-KLQAIVPS---MPEVLYQIASLYEITGDVEQA 287
A+YN LG LN+ +L + L A S + EV Y + + YE + D E A
Sbjct: 91 AIYNLLGSCEMKLNDPQGALSYYRLALSAEDSSEDLLKEVKYNMIAAYEQSKDWESA 147
>gi|399029057|ref|ZP_10730110.1| tetratricopeptide repeat protein [Flavobacterium sp. CF136]
gi|398073079|gb|EJL64263.1| tetratricopeptide repeat protein [Flavobacterium sp. CF136]
Length = 257
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 166 SSAATNLSFIYFLQGEVEQAE----KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
++A+ NL + Q +V +A+ K ++A T A+ NLGN M +DY + E
Sbjct: 55 ATASYNLGNTIYRQNQVSEAKFAYGKAIKDAKTRPE-KHKAYHNLGNVFMKEKDYSQAVE 113
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNE 249
Y AL ND T E YN A + L E
Sbjct: 114 AYKQALRNDPTDDETRYNYAYAKQKLKE 141
>gi|220930570|ref|YP_002507479.1| hypothetical protein Ccel_3209 [Clostridium cellulolyticum H10]
gi|220000898|gb|ACL77499.1| Tetratricopeptide TPR_2 repeat protein [Clostridium cellulolyticum
H10]
Length = 234
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 159 KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA-AFVNLGNCAMAREDYV 217
K D S N + + GE+++A + EE Y S + +LG + + +
Sbjct: 74 KISDNDLYSLKANYALALWKNGELDRAIAIYEEIFP--NYKSTNVYGSLGYLYILKGNVE 131
Query: 218 KGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
K E + A++ + T L NLG + + EY+ + E F KL A+ P PE Y A +
Sbjct: 132 KALEFNLEAMEYNNTGAVILDNLGQTYYMMGEYTKAEEIFKKLMALGPKFPEAYYDYALV 191
Query: 278 YEITGDVE 285
E G+ E
Sbjct: 192 LEKLGEKE 199
>gi|428175309|gb|EKX44200.1| hypothetical protein GUITHDRAFT_140027 [Guillardia theta CCMP2712]
Length = 806
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
D + + V F + D +A LK S + ++ A L Y E ++AEK+ E+A
Sbjct: 51 DEAMARGVRFTKNGDYVRAKTCLKVAYSRNPRNAATAFYLGEAYLNTNEADRAEKVLEKA 110
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A+ N + L +C V+ Y L D I AL N G+ K L +
Sbjct: 111 VKAERSNLMGQLLLASCKQRLGKKVEALAAYEAGLLLDKHNIAALVNGGIVLKDLGRREE 170
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
++ + + P +PE Y +A + GDV A
Sbjct: 171 AVAKLNAAIRVKPDVPEAHYNLADVLYSMGDVAGA 205
>gi|195376509|ref|XP_002047039.1| GJ12147 [Drosophila virilis]
gi|194154197|gb|EDW69381.1| GJ12147 [Drosophila virilis]
Length = 1187
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 198 NVRIGMAHCFLKMGNAEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 257
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 258 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 317
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 318 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 367
>gi|410940451|ref|ZP_11372260.1| tetratricopeptide repeat protein [Leptospira noguchii str.
2006001870]
gi|410784434|gb|EKR73416.1| tetratricopeptide repeat protein [Leptospira noguchii str.
2006001870]
Length = 160
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 137 LEINK-AVTFLRMNDVSQAVDVLKSCDEMTSSAA---TNLSFIYFLQGEVEQAEKMAEEA 192
LE N+ VT L D+ QA + ++ + N+ Y +G+++QA ++
Sbjct: 8 LEFNRQGVTLLNKGDLIQARSFFEKAVKLNPQSPEYVNNVGVTYLNEGKLDQAIVFFAKS 67
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
D AF NLG +++ K + Y+ + D T E +NLG+ + +
Sbjct: 68 AERDPNYVRAFYNLGVAYQNQQNNEKAVQNYLKVVAIDKTFAEVYFNLGIVYARMGNKKQ 127
Query: 253 SLECFHKLQAIVPS 266
+++ + K + P+
Sbjct: 128 AIDNYQKFIEVAPA 141
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 52/111 (46%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+G++ QA E+A + + N+G + + + + + D + A Y
Sbjct: 20 KGDLIQARSFFEKAVKLNPQSPEYVNNVGVTYLNEGKLDQAIVFFAKSAERDPNYVRAFY 79
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
NLG+A+++ +++ + K+ AI + EV + + +Y G+ +QA D
Sbjct: 80 NLGVAYQNQQNNEKAVQNYLKVVAIDKTFAEVYFNLGIVYARMGNKKQAID 130
>gi|340506038|gb|EGR32281.1| tetratricopeptide repeat protein [Ichthyophthirius multifiliis]
Length = 198
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 142 AVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
A+ +++ + QA+ +L+ DE S A LS IY+ Q +E+ ++ +A T +
Sbjct: 1 ALIYIKQENYKQALYILQKIIQIDENNSQAYYLLSSIYYKQENMEKYQEYLLKAYTKNPQ 60
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDN-DATCIEALYNLGLAHKHLNEYSDSLECF 257
N L + E YVK +E+ LD + L NLG+ +Y D+L F
Sbjct: 61 NEDYVYLLAQIYIKEEKYVKAREI----LDQIQKKSPKILQNLGIVQIFEQKYEDALLNF 116
Query: 258 HKL--QAIVPSMPEVLYQIASLYEITG 282
K+ Q + +V +Q++ +Y+ G
Sbjct: 117 QKILDQNVFDG--DVFFQMSLIYQKQG 141
>gi|91200098|emb|CAJ73141.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 344
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 142 AVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
A+++ + ++A+ K D + A L +Y+ + A E+ + D
Sbjct: 148 ALSYTKSGKANEAIANFKKVIELDPRDAKALLELGTLYYKNRMADDAIATFEKYVSLDQG 207
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
N+ + N+G + + K + Y+ AL + + YN+G+A+ + + +++E F
Sbjct: 208 NANVYYNMGCIYGEKNRFDKAVKAYLMALTINPNHVPTYYNIGVAYNMMERFDEAIEAFK 267
Query: 259 KLQAIVPSMPEVLYQIASLYEITG 282
K+ + P + LY + Y +G
Sbjct: 268 KVLNLDPENHDALYNLGFAYNKSG 291
>gi|146182723|ref|XP_001025109.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|146143748|gb|EAS04864.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 2120
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 123 QSIRNSAHSSLAQDLEINKAVTFL---------RMNDVSQAV-DVLKSCDE------MTS 166
QSI+ L L++NK+V L + N + Q V + LK + S
Sbjct: 138 QSIKEGNQKQLMDSLKVNKSVVKLPSLNSLENEKYNQLKQIVKESLKDLNGKINQKYFKS 197
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
+A + + Y Q E ++A + ++A DT N V G+C + Y E Y +
Sbjct: 198 NALLDQANFYNKQKEFDKAIEYYDQAMEVDTNNINILVGKGDCLRKQGQYEAALECYEYG 257
Query: 227 LDNDAT---CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGD 283
++ + L+N G +K + + +++EC+ K + P P + A + G+
Sbjct: 258 MNLNPPHKYQFRILFNKGNIYKCMGKNKEAIECYSKASLLDPQNPNTYFNKALAFYSLGE 317
Query: 284 VEQASD 289
+++ D
Sbjct: 318 LDEVID 323
>gi|189426403|ref|YP_001953580.1| hypothetical protein Glov_3354 [Geobacter lovleyi SZ]
gi|189422662|gb|ACD97060.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
Length = 1212
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 180 GEVEQA-EKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G E+A EK A D N AF+NLG A ++ KE + A D EA
Sbjct: 814 GRREEAIEKFRAAAVLPDR-NGPAFLNLGIYLRADGKLLQAKEALLQATQADPGYPEAWQ 872
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVP 265
NLGL H+ L E ++ C + + P
Sbjct: 873 NLGLTHQGLGELPEAYTCLKRALTLRP 899
>gi|89898762|ref|YP_515872.1| hypothetical protein CF0955 [Chlamydophila felis Fe/C-56]
gi|89332134|dbj|BAE81727.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 335
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 34/131 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAEQRLKETLELDPTAALAYCYLGIIALESGRIPEALTWCTKGLESEPGDSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L +Y +++ECF K+
Sbjct: 79 LRYCYGVALDRDNRCEEAVEQYRAYVVLHPDDAECWFSLGGVYHRLGQYIEAIECFDKIL 138
Query: 262 AIVPSMPEVLY 272
+ P P+ LY
Sbjct: 139 ELDPWNPQSLY 149
>gi|398346185|ref|ZP_10530888.1| hypothetical protein Lbro5_02905 [Leptospira broomii str. 5399]
Length = 689
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 6/152 (3%)
Query: 145 FLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAE---KMAEEACTADTY 198
F +ND A+D K S NL+ YF +GE+ QAE K+
Sbjct: 216 FNEINDPDAAIDAYKRGLSAAPDDPYLTYNLAVSYFKKGELPQAEEQFKLVILKSRGGKL 275
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
++ + LGN A R DY + + A +ALYNL + K + ++L+
Sbjct: 276 SALSSAYLGNIAYNRGDYGSAEHYFREAATLSPNDAKALYNLSVVLKKNGKMEEALKYLE 335
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ S PE+ IA +E EQ+ D
Sbjct: 336 MAKLAGASDPEIFRSIAESFEQLNQGEQSIDA 367
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 134 AQDLEINKAV--TFLRMNDVSQAVDVLKSCDEMTSSAATNLSFI------YFLQGEVEQA 185
A D EI +++ +F ++N Q++D L + + NL + Y+ +G++ A
Sbjct: 342 ASDPEIFRSIAESFEQLNQGEQSIDALHKGLKYNPN---NLDLLFQLAETYYNRGDLLAA 398
Query: 186 EKMAE---EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
E+ ++ D++ A +NLG E Y + LD + +A YNLGL
Sbjct: 399 EETYRRIVDSTPGDSFTETALINLGVVLDQMERYGEAVTYLNRVLDINPKNAKAYYNLGL 458
Query: 243 AHKHLNEYSDSLECFHKLQAIVPS 266
+KH ++E F K + P+
Sbjct: 459 VYKHTGNGVQAIENFRKSAYLDPT 482
>gi|195014701|ref|XP_001984064.1| GH15212 [Drosophila grimshawi]
gi|193897546|gb|EDV96412.1| GH15212 [Drosophila grimshawi]
Length = 1192
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 198 NVRIGMAHCFLKMGNAEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 257
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 258 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 317
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 318 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 367
>gi|414078406|ref|YP_006997724.1| hypothetical protein ANA_C13230 [Anabaena sp. 90]
gi|413971822|gb|AFW95911.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 303
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 3/152 (1%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
+N+ + +++ + A+ + D ++A NL G+++ A +A A
Sbjct: 49 LNQGLQAIQLGQLEAAITAFRQAIKLDPKLAAAHYNLGLALRQSGQLQPAADAFYQATQA 108
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D + AF NLG + + ++ AL + A YN+GL + + ++
Sbjct: 109 DPQFALAFANLGGALLEGNNLKLAQDYLNQALKLNPNLGFAHYNMGLVKEQEKNWESAIA 168
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
F K + + + PE Y + Y +EQA
Sbjct: 169 SFQKARTMSQNAPEPAYHLGICYLQQRKIEQA 200
>gi|282899875|ref|ZP_06307836.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195145|gb|EFA70081.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 173
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 207 GNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
G A A +Y + E Y AL ND + I LYN+GL + ++ +L+ +HK
Sbjct: 42 GMSAQAEGEYAEALEYYEEALSLEEDTNDKSFI--LYNMGLIYASNGDHDQALDFYHKAI 99
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMK 312
+ P +P+ L IA +Y G E+A + +N EA+ + A R ++
Sbjct: 100 DLNPRLPQALNNIAVIYHYKG--EKAKEEGDNDGGEALFDQAADYWIRAIR 148
>gi|440681923|ref|YP_007156718.1| glycosyl transferase family 2 [Anabaena cylindrica PCC 7122]
gi|428679042|gb|AFZ57808.1| glycosyl transferase family 2 [Anabaena cylindrica PCC 7122]
Length = 424
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
+ NLGN A D K Y A+ D++ I YNLG+ K +N ++++++C+ +
Sbjct: 303 GGYNNLGNLLKATGDLPGAKIAYETAIKIDSSFITGYYNLGMVCKAMNLFAEAIDCYDQA 362
Query: 261 QAIVPSMPEVLYQIASLYEITGDVE 285
+ P E + + GDVE
Sbjct: 363 IQLNPDYAEAYQNLGVVLLKVGDVE 387
>gi|388581639|gb|EIM21946.1| TPR-like protein [Wallemia sebi CBS 633.66]
Length = 1033
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 180 GEVEQAEKMAEEACTAD-TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
GE ++A++ D N A + +GN M E + E++ DN+ TC +Y
Sbjct: 418 GERDEAKRHFSHVLKLDLEANVALYGEVGNSFMKHEMFEDALEVFKVMEDNERTCSTPVY 477
Query: 239 -NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
NL + HK LN + + F + + P +V Q+A YE G EQA
Sbjct: 478 RNLAVCHKALNNLDMAEQIFEHVCQLEPDNMDVTMQLAETYEALGKREQA 527
>gi|307718362|ref|YP_003873894.1| hypothetical protein STHERM_c06620 [Spirochaeta thermophila DSM
6192]
gi|306532087|gb|ADN01621.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 653
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN 229
L ++ +GE ++A + EA D + NLGN ++ Y + + Y A++
Sbjct: 509 VQLGLLHQDKGEDDKALSLLLEAYKLDPTSFEVNNNLGNLYARKKLYSESIKHYRAAIEA 568
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
D YNL L++ EY +++ F +L I PS + YQ+ L D E A
Sbjct: 569 DPKDTLVRYNLALSYLDAKEYDEAVRVFQELLKIDPSYWDAYYQLGKLLITLEDAEGAKK 628
Query: 290 VNENLL 295
V LL
Sbjct: 629 VLSTLL 634
>gi|421097131|ref|ZP_15557827.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410799871|gb|EKS01935.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 187
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 141 KAVTFLRMNDVSQAVDVLKSCDEM---TSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
+ +T L D QA + ++ A N+ Y +G+++QA ++ +
Sbjct: 40 QGITLLSKGDFIQARSFFEKASKLHPQYPEYANNIGVTYLNEGKLDQAIIYFTQSIEKNP 99
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+ AF NLG +++ K + Y+ ++ D + EA +NLG+ + + ++E +
Sbjct: 100 SYARAFYNLGVVHQKQQNNEKALQNYLKTVNIDNSITEAYFNLGIIYTRMGNKKQAIESY 159
Query: 258 HKLQAIVPS 266
K P+
Sbjct: 160 QKFIDTAPA 168
>gi|414160977|ref|ZP_11417240.1| hypothetical protein HMPREF9310_01614 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876656|gb|EKS24554.1| hypothetical protein HMPREF9310_01614 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 222
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE+E+AEK ++A T D N A + NL N E + +LY AL + Y
Sbjct: 47 GEIEKAEKFFQKALTIDPNNGAIYYNLANVYYNAESFNDAIKLYQQALKTGVDEADTNYM 106
Query: 240 LGLAHKHLNEYSDSL 254
+G++ +L +Y +L
Sbjct: 107 IGMSFNNLGDYKSAL 121
>gi|320353693|ref|YP_004195032.1| type 12 methyltransferase [Desulfobulbus propionicus DSM 2032]
gi|320122195|gb|ADW17741.1| Methyltransferase type 12 [Desulfobulbus propionicus DSM 2032]
Length = 409
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
NL + + + +QA +A + ++ NL C D Y L
Sbjct: 53 NLGLVQYGLHQFDQALSSFSQAASLGPEDNDVLFNLALCQKETGDLAAAVATYQRILAAA 112
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ LYNLG ++ L++ ++ C+H++ A+ P + +A LY G++EQA
Sbjct: 113 PDHADCLYNLGGCYRTLHDDVQAMACYHRVLAVAPGYHQAANNLAYLYHRAGEIEQA 169
>gi|308802594|ref|XP_003078610.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri]
gi|116057063|emb|CAL51490.1| COG0457: FOG: TPR repeat (ISS), partial [Ostreococcus tauri]
Length = 1474
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 113 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRM-----NDVSQAVDVLKSCDEMTSS 167
+F +G +W S R S ++L ++ KA+ L M +++A D +K E+ S
Sbjct: 662 HFMSG-DW--ASARTSYLAALDREPHYYKALYNLAMLLDVTGFIAEAKDTMKRAVEIRRS 718
Query: 168 ---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
+ +Y G+ ++AE+ + A D ++ + V LGN A R ++ LY+
Sbjct: 719 DVRGVYAMGLLYVKLGQWKKAEEQFKNALLIDDKHAMSHVKLGNLAFRRGEFEFAGALYL 778
Query: 225 HALDNDATCIEALYNLGL 242
+AL++D+T +EAL N+ +
Sbjct: 779 NALESDSTNVEALTNIAM 796
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%)
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
TS L+ IY QG E+A + + A D ++ N+GN D+ + Y+
Sbjct: 617 TSQRQITLANIYLSQGHTEKAIALFDIAIRRDPVSAIGHFNIGNAHFMSGDWASARTSYL 676
Query: 225 HALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDV 284
ALD + +ALYNL + +++ + + I S +Y + LY G
Sbjct: 677 AALDREPHYYKALYNLAMLLDVTGFIAEAKDTMKRAVEIRRSDVRGVYAMGLLYVKLGQW 736
Query: 285 EQASDVNENLLL 296
++A + +N LL
Sbjct: 737 KKAEEQFKNALL 748
>gi|355564558|gb|EHH21058.1| Protein SMILE [Macaca mulatta]
Length = 881
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 509 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 568
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 569 NLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 625
>gi|403359316|gb|EJY79316.1| TPR repeat-containing protein [Oxytricha trifallax]
Length = 1076
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 134 AQDLEINKAVT---FLRMNDVSQAVDVLKSC--DEMTSSAATNLSFIYFLQGEVEQAEKM 188
+D E N + + + D +A+ LK +E ++A NL+ IY +G+ +A++
Sbjct: 100 PEDFETNFNIGVFYYEQKKDYEKAIHFLKIAINEEKNATALFNLAVIYEEKGDKLKAKEA 159
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKE---LYVHALDNDATCIEALYNLGLAHK 245
E AD + + VNL A+ + KG E Y AL + + +N+G+ K
Sbjct: 160 YAECQKADQSHYKSKVNL---AILLDKEGKGHEANQFYQEALKQNPKDAKIHHNMGINLK 216
Query: 246 HLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDV 290
+ ++L + K + P VLY LY I D A DV
Sbjct: 217 RAGKLDEALSHYKKAMELDPDNSTVLYNTGILYNIKSDYHNAVDV 261
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 148 MNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFV 204
M + +A++ K D+ S NL +L + A + + A + ++
Sbjct: 868 MGEPKEAIEYYKKALELDKGLSDVHYNLGNALYLIENTDLAIQHYKIAIDLNPNKPESYY 927
Query: 205 NLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
NLGN + ++ K Y ++ D A YNLG A+ +NE+ ++ + + +
Sbjct: 928 NLGNALCIKAEFEKAIVNYKRTIELDPYNAPAFYNLGNAYYMINEFDKAISSYGQALKLN 987
Query: 265 PSMPEVLYQIASLYEITGDVEQA 287
P E + IAS Y GD + A
Sbjct: 988 PDSAECHFNIASAYNDKGDFDNA 1010
>gi|238881088|gb|EEQ44726.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 978
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 48/93 (51%)
Query: 187 KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKH 246
K +++ D ++ ++ LG M R D+ E + A++ DA ++G+ +
Sbjct: 349 KYLKQSLEVDQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNPTFWCSIGVLYYQ 408
Query: 247 LNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+++Y D+L+ + + + P + EV Y + +LYE
Sbjct: 409 ISQYRDALDAYTRAIRLNPYISEVWYDLGTLYE 441
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 30/155 (19%)
Query: 220 KELYVHALDNDAT---CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP---SMPEVLYQ 273
+E +V LD D E + LG+ +KH + +LECF + P + P+V +Q
Sbjct: 221 EEAFVRVLDLDPNFDKANEIYFRLGIIYKHQGKLQPALECFQYILNNPPHPLTQPDVWFQ 280
Query: 274 IASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 332
I S+YE D A D E +L + L QL C+ + A E
Sbjct: 281 IGSVYEQQKDWNGAKDAYEKVLQINPHHAKVLQQL---------GCLYSQA-------ES 324
Query: 333 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLR 367
N N Q H QDL I A+ +L+
Sbjct: 325 NPPTPANGAAQ-----PHKPFQQDLTI--ALKYLK 352
>gi|94970794|ref|YP_592842.1| hypothetical protein Acid345_3768 [Candidatus Koribacter versatilis
Ellin345]
gi|94552844|gb|ABF42768.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 299
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 124 SIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMT---SSAATNLSFIYFLQG 180
+IR SL L + +++ ++++ L +M S A N Y+++G
Sbjct: 106 AIRKEPTPSLYNKL----GIALIQLRHPEESIETLNHAIKMQKDFSDAWNNRGGAYYMEG 161
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
++A K E A + N++ NLG+ R DY+K + Y AL D E +
Sbjct: 162 NFKKASKDFEHAIKINADNASYHSNLGSAYFNRHDYIKASKEYTIALKLDPYVFERSSKM 221
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDV 284
G+ + + SD E Y +A L+ TGD
Sbjct: 222 GIT-ASMGKPSDRA--------------EFEYMMAKLFAQTGDA 250
>gi|443898203|dbj|GAC75540.1| FOG: TPR repeat [Pseudozyma antarctica T-34]
Length = 875
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQGEV----EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y L E+A + ++ +D ++ ++ LG MA ++Y K E Y A+
Sbjct: 298 LGWLYHLSNAGFNNQERAIQFLTKSLESDPNDAQSWYLLGRAYMAEQNYNKAYEAYQQAV 357
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + +N+Y D+L+ + + + P + EV + + SLYE
Sbjct: 358 YRDGKNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWFDLGSLYE 409
>gi|118383764|ref|XP_001025036.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89306803|gb|EAS04791.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 670
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELY-----VHALDN 229
+++ G+ E+A ++A ++ +++++ NLG + + Y K + + + LDN
Sbjct: 445 LFYKLGQYEKAIASFKKALRINSEHNSSYFNLGMLYLKMQKYNKSIKYFESLVKMTPLDN 504
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
EAL++LG ++K + + SL+ F++ I P + L+ I +Y
Sbjct: 505 -----EALFHLGFSYKQVQNHQKSLKYFYQALKIAPQKAKYLFNIGQVY 548
>gi|326438126|gb|EGD83696.1| hypothetical protein PTSG_04301 [Salpingoeca sp. ATCC 50818]
Length = 615
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 29/262 (11%)
Query: 27 RNQDFKAA----------LEKAKLASNKERVLIKLQEQFGHADSHNIEL-----TFSNIN 71
R+QDF+AA L++ KL + ++ L+ G +EL TFS
Sbjct: 312 RDQDFEAAYETCKTAVDALQEMKLENGRKETLVSAMNILGSFQMLRLELQEAERTFSEAL 371
Query: 72 R--KKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA 129
R K+NA + A +L EA T+ +L + + F A
Sbjct: 372 RFNKRNANTLIRLAACRLELGRTSEALTDFTTAQRLDDKNPDVYFHKAQAHISMGAAVMA 431
Query: 130 HSSLAQDLEINK---------AVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSF---IYF 177
S L + +++ A+ L+ D A+D+++ +T S+ IY
Sbjct: 432 FSDLQRAIKLGTKVYGPYVHLALLHLQTQDAKSAIDLMQEAVTKFPEVSTVHSYLGEIYS 491
Query: 178 LQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
G+ ++A + ++A + D +N+ +V+ G + + + +G EL A++ D C A
Sbjct: 492 AVGDNDKAVECFDKAISLDPHNANPYVHKGLVFVQQGNMEQGIELIHKAIEVDDACESAY 551
Query: 238 YNLGLAHKHLNEYSDSLECFHK 259
L H EY ++L+C+ K
Sbjct: 552 ARLAQIHVQREEYEEALKCYDK 573
>gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916]
gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916]
Length = 734
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
QG +++AE + E A T N + NL + + + +L L+ EA Y
Sbjct: 44 QGRLQEAESIYRELIAAGTNNHIVYGNLAALCGMQGRFSELIKLLRRTLEIKPNYPEAHY 103
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
NLGLA K + + ++ ++K + P+ PE + + Y+ GD+ A
Sbjct: 104 NLGLALKEQGDLTAAIASYNKALQLRPNYPEAHNNLGNAYKDQGDLTAA 152
>gi|355786395|gb|EHH66578.1| Protein SMILE [Macaca fascicularis]
Length = 914
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|384915899|ref|ZP_10016104.1| TPR repeats containing protein (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526761|emb|CCG91975.1| TPR repeats containing protein (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 275
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A+ NLG C + Y K E + HAL + +A NLG + L +YS +++ K
Sbjct: 140 AWCNLGTCYVFLGQYAKATEAFKHALADQPNLAKAWSNLGACYIQLGQYSQAIKALKKAI 199
Query: 262 AIVPSMPE 269
++ P + E
Sbjct: 200 SLKPDLAE 207
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ + + S A++ K ++ + A NL Y G+ +A + + A AD
Sbjct: 111 GIAYENLGHYSLAIEAYKKAIDLKKDFAKAWCNLGTCYVFLGQYAKATEAFKHAL-ADQP 169
Query: 199 NSA-AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
N A A+ NLG C + Y + + A+ E+ NLG+A+ +Y ++E
Sbjct: 170 NLAKAWSNLGACYIQLGQYSQAIKALKKAISLKPDLAESWCNLGIAYGERKDYHKAMESL 229
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDV 284
K + P+ E + +A +YE T ++
Sbjct: 230 RKAVELRPNYMEAWWNLAKIYEKTKNL 256
>gi|325959296|ref|YP_004290762.1| hypothetical protein Metbo_1563 [Methanobacterium sp. AL-21]
gi|325330728|gb|ADZ09790.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 589
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
+ S A NLG A + KG ++ D L + G + LN+ D+L F
Sbjct: 166 WKSLALWNLGRKQNAIDQLEKGLKI-------DPEDYSLLNSKGEFLRDLNQPEDALNTF 218
Query: 258 HKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+Q++ P PE+LYQI +LY+ D E++
Sbjct: 219 GYMQSLYPDDPEILYQIGNLYKDLNDKEKS 248
>gi|110596792|ref|ZP_01385082.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
[Chlorobium ferrooxidans DSM 13031]
gi|110341479|gb|EAT59939.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
[Chlorobium ferrooxidans DSM 13031]
Length = 466
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%)
Query: 200 SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHK 259
S+A+ N N + E Y+ L+ + I ALYNLG+A++ L +YS+++ C+ +
Sbjct: 239 SSAWYNRANVLAITGRIEEAAESYIKTLEQEPDDINALYNLGIAYEELEDYSEAVHCYRR 298
Query: 260 LQAIVPSMPEVLYQIASLYEITGDVEQA 287
I + + +A +E + E+A
Sbjct: 299 CIEINSEFTDAWFALACCHEALEEYEEA 326
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%)
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
+AE+ E A D S A+ L C + Y LD D I A YN GL
Sbjct: 155 EAEEDFERALELDAEFSDAWYELAYCKDILGKLEESTSCYRKTLDQDPYNINAWYNNGLV 214
Query: 244 HKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+ Y ++L+ + AI Y A++ ITG +E+A++
Sbjct: 215 LSKMKRYDEALDSYDMSLAISEDFSSAWYNRANVLAITGRIEEAAE 260
>gi|18767668|gb|AAL54912.2|AF170083_1 putative transcriptional repressor [Candida albicans]
Length = 1085
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 220 KELYVHALDNDAT---CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP---SMPEVLYQ 273
+E +V LD D E + LG+ +KH + +LECF + P + P+V +Q
Sbjct: 221 EEAFVRVLDLDPNFDKANEIYFRLGIIYKHQGKLQPALECFQYILNNPPHPLTQPDVWFQ 280
Query: 274 IASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 332
I S+YE D A D E +L + L QL C+ + A E
Sbjct: 281 IGSVYEQQKDWNGAKDAYEKVLQINPHHAKVLQQL---------GCLYSQA-------ES 324
Query: 333 NFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRM 368
N N Q H QDL I A+ +L+
Sbjct: 325 NPPTPANGAAQ-----PHKPFQQDLTI--ALKYLKQ 353
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 48/93 (51%)
Query: 187 KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKH 246
K +++ D ++ ++ LG M R D+ E + A++ DA ++G+ +
Sbjct: 349 KYLKQSLEVDQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNPTFWCSIGVLYYQ 408
Query: 247 LNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+++Y D+L+ + + + P + EV Y + +LYE
Sbjct: 409 ISQYRDALDAYTRAIRLNPYISEVWYDLGTLYE 441
>gi|392411117|ref|YP_006447724.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390624253|gb|AFM25460.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 487
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 117/294 (39%), Gaps = 34/294 (11%)
Query: 123 QSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAV-DVLKSC--DEMTSSAATNLSFIYFLQ 179
++IRN L D+ + V+ R+ +++AV D K+ D +A N Y+
Sbjct: 51 KAIRNGV---LNSDVFFRRGVSHERLGKLNEAVQDYSKAIEIDPRMETALNNRGSAYYRL 107
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
GE ++A K A + A+ N GN + + K E + A+ D + N
Sbjct: 108 GEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNN 167
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
G A+ +NE S+E F + + P+ Y +A Y G+ S E
Sbjct: 168 RGWAYLQVNEIDKSIEDFDRAIQLDPN-----YVLA--YANRGNARLKSGNVEG------ 214
Query: 300 RNDALSQLHR--EMKHEAEKCILTSAK-LIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQD 356
A+ L R E+ E L + + D N YN V+ S + D
Sbjct: 215 ---AIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRI------SPILAD 265
Query: 357 LEINKAVTFLRMNDVSQAV-DVLK--SCDEMTSSAATNLSFIYFLVSSEFQYLP 407
N+ F + +++QA+ DV K S + S A TN +I+ + + LP
Sbjct: 266 PYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALP 319
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 18/147 (12%)
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVN-- 205
+ND ++AV + + + N +++F +G + QA + +A + + S A+ N
Sbjct: 250 LNDYNKAVRI----SPILADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRG 305
Query: 206 -----LGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
+G C A D+ + EL D A I L H + + S K
Sbjct: 306 WIHKSIGECPKALPDFDRALEL-----DPSAAAIYVFRAECLLSMHQTDRARS--DLDKA 358
Query: 261 QAIVPSMPEVLYQIASLYEITGDVEQA 287
A+ P+ PE+L + SL EI GD A
Sbjct: 359 YALDPTNPEILETLGSLKEIAGDYSAA 385
>gi|402887181|ref|XP_003906981.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Papio
anubis]
Length = 914
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|393247501|gb|EJD55008.1| TPR-like protein [Auricularia delicata TFB-10046 SS5]
Length = 1099
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP----EVLYQIASLYEITGDVEQASDV 290
E L+ LG+ +K +Y +SL+CF ++ PS P ++ +QI +YE D + A D
Sbjct: 203 EILFRLGIIYKQQGKYRESLDCFDRILRSPPS-PLAHIDIWFQIGHVYEQLKDYDHAKDA 261
Query: 291 NENLLLEA 298
E ++++A
Sbjct: 262 YERVVIDA 269
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ ++ LG MA + Y K E Y A+ D ++G+ + +N++ D+L+
Sbjct: 336 DASDAQSWYLLGRAYMAGQKYSKAYEAYQQAVYRDGRNPTFWCSIGVLYFQINQFRDALD 395
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + I P + EV + + SLYE
Sbjct: 396 AYSRAIRINPYISEVWFDLGSLYE 419
>gi|254580743|ref|XP_002496357.1| ZYRO0C16522p [Zygosaccharomyces rouxii]
gi|238939248|emb|CAR27424.1| ZYRO0C16522p [Zygosaccharomyces rouxii]
Length = 974
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 300 DPSDATTWYHLGRVHMIRSDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 359
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 360 AYTRAIRLNPYISEVWYDLGTLYE 383
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP------EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH +++ +LECF + I+P P ++ +Q+ S+ E G+ + A
Sbjct: 196 EIYFRLGIIYKHQGKWNQALECF---RYILPQPPAPLQEWDIWFQLGSVLENMGEWQGAR 252
Query: 289 DVNENLLLE 297
+ E++LL+
Sbjct: 253 EAYEHVLLQ 261
>gi|428319715|ref|YP_007117597.1| glycosyl transferase family 2 [Oscillatoria nigro-viridis PCC 7112]
gi|428243395|gb|AFZ09181.1| glycosyl transferase family 2 [Oscillatoria nigro-viridis PCC 7112]
Length = 1533
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
IY QG++E+A E+A + A+ LGN A+ + + Y A++ +
Sbjct: 20 IYLSQGKIEEAIASCEQALKIHPNFAPAYKTLGNALQAQARMEEARHWYAKAIEIEPNFA 79
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E NLG ++ +++ + K AI P+ V +A ++ G E+A
Sbjct: 80 EVYANLGSLGAQQQKWQEAIGFYQKAIAIKPNFAGVYRNLAKVFGQIGKPEEA 132
>gi|296127341|ref|YP_003634593.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 750
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N +++ M+D +A++ E+ S+A NL I G ++A + A +
Sbjct: 387 NIGLSYYEMHDYEKAIEYYNKALEINTQYSAAYINLGLIEHNFGNYQEAINYYKRALEIN 446
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
S ++ N+ M+ EDY K E + HAL+ + N+GL + Y ++E
Sbjct: 447 PNYSLSYYNIALAEMSLEDYDKALEDFNHALELGYNEADIYTNIGLIYSREAIYDKAIEY 506
Query: 257 FHKLQAIVPSMPEVLYQIA 275
++K+ I P+ Y IA
Sbjct: 507 YNKVLEINPNKVNAYYNIA 525
>gi|91202926|emb|CAJ72565.1| hypothetical protein kustd1820 [Candidatus Kuenenia
stuttgartiensis]
Length = 645
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
D+ N V + ++N A++ K +M S A NL +Y GE++ A + + A
Sbjct: 490 DVHNNLGVLYTKINRSDLAMEEFKRAIKSKQMYSDAHNNLGILYAYTGELDLAIESFKNA 549
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
++ + A+ NLG + + Y + + ++ A+ D ++A Y L A+ + +Y
Sbjct: 550 ISSRPDHPDAYANLGTAYLKKGMYDEAIQQFLKAISYDNQYVKAYYYLSTAYWNKGQYEK 609
Query: 253 SLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ E ++ +I P+ + L + ++ + G + A
Sbjct: 610 AAETCRRILSIDPTHGDTLTLLNTIEQRQGRTQTA 644
>gi|428211053|ref|YP_007084197.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Oscillatoria acuminata PCC 6304]
gi|427999434|gb|AFY80277.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Oscillatoria acuminata PCC 6304]
Length = 796
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A L +Y+ QG++ +A +E D ++ A+ LGN ++E + + Y A+
Sbjct: 45 AHCQLGDLYWRQGQLTEAIAHCQETLKLDPQSAEAYKTLGNILQSQEKWTAAERAYQQAV 104
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
A NLG + E ++ C+ K + PS + + + LY G + +A
Sbjct: 105 QIMPEFAAAHANLGSLYYRRRESERAVACYQKALTLEPSQAGIHWNLGMLYHDLGRLGEA 164
Query: 288 SDVNENLL-LEAVRNDA 303
+ ++ L LE +A
Sbjct: 165 VESWQDALRLEPTMGNA 181
>gi|82701152|ref|YP_410718.1| hypothetical protein Nmul_A0017 [Nitrosospira multiformis ATCC
25196]
gi|82409217|gb|ABB73326.1| tetratricopeptide TPR_3 [Nitrosospira multiformis ATCC 25196]
Length = 407
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 132 SLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEE 191
SLA L + + +M + +D KS D N + + + + K++++
Sbjct: 231 SLAFVLPSDWLDSLPKMTQAPRPMDP-KSADPGHGLVWLNQTLALEKKADWRRLLKLSQQ 289
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYS 251
D N+AA+ N+G + + Y + Y A+ + A +A + LG+A+ HL +Y
Sbjct: 290 ETGRDPSNAAAWFNVGIASCNLKQYSQAVNAYREAIRHHAGYADAWHKLGMAYAHLKDYE 349
Query: 252 DSLECFHKLQAIVPSMPEVLYQIASLY 278
++ + + + P E Y + + Y
Sbjct: 350 NASQAYEDAVRLDPDNGEAWYDLGNTY 376
>gi|405123333|gb|AFR98098.1| general transcriptional repressor [Cryptococcus neoformans var.
grubii H99]
Length = 1028
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQG----EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G + E+A ++ D ++ ++ LG MA + Y K E Y A+
Sbjct: 269 LGWLYHQPGAHFADQEKAVSYLTKSLETDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAV 328
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + + +Y D+L+ + + + P + EV Y + SLYE
Sbjct: 329 YRDGRNPTFWCSIGVLYYQIAQYRDALDAYSRAIRLNPYISEVWYNLGSLYE 380
>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
PWS/A]
Length = 817
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 151 VSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCA 210
+++A+D+ + E+ +S + +Y+ + + E+A K +A +T ++A+ N+G
Sbjct: 404 LNKALDIDTNNAEIYNS----IGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAY 459
Query: 211 MAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEV 270
DY + Y AL+ + A NLGL +L Y ++++ + K I P
Sbjct: 460 YEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLA 519
Query: 271 LYQIA 275
Y IA
Sbjct: 520 YYNIA 524
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEACTADTY 198
+ + D +A+ E+ +S A+ N+ Y+ + E + + +A +
Sbjct: 422 GLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQ 481
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
++A++NLG +Y + + Y AL+ + A YN+ LA L +Y +SLE F+
Sbjct: 482 YASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFN 541
Query: 259 KLQAIVPSMPEVLYQIASLY 278
K + E+ I +Y
Sbjct: 542 KALELGYDEAEIYINIGLIY 561
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 125 IRNSAHSSLAQDLEI--NKAVTFLRM-------NDVSQAVDVLKSCDEMTSSAATNLSFI 175
+ N A L + L+I N A T+ +M D A+ L E+ ++ + I
Sbjct: 328 LNNEALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVVIYNEI 387
Query: 176 YFLQGEVE---QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
++ E+E +A +A DT N+ + ++G ++DY + + + A++ + +
Sbjct: 388 ALIKVELELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTS 447
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
A YN+GLA+ +++Y +S++ ++K I P + + G+ ++A D
Sbjct: 448 MASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAID 504
>gi|327399777|ref|YP_004340646.1| hypothetical protein Hipma_1637 [Hippea maritima DSM 10411]
gi|327182406|gb|AEA34587.1| protein of unknown function DUF115 [Hippea maritima DSM 10411]
Length = 922
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 129 AHSSLAQDL--EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSF----IYFLQGEV 182
A SL D+ E KA+ F++ + +A D+L + S ++ F IY + E+
Sbjct: 744 AQLSLEGDIFDEYKKAIDFVKKEQLDKAFDILVELYDKYGSFG-DIPFLLGSIYIDRKEL 802
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN-LG 241
++AEK +EA Y ++ LG + +E+Y KE A++ + + + LG
Sbjct: 803 DKAEKYLKEAVELIPYQPLVYLALGKLYLMKENYYAAKENLEKAINMNPDLKPGILDTLG 862
Query: 242 LAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
+ EY + F + + L +IA Y+ G
Sbjct: 863 NLYYEFGEYEKAFRAFEEFLQYSDDKIKTLTKIALCYKEMG 903
>gi|383770559|ref|YP_005449622.1| hypothetical protein S23_22970 [Bradyrhizobium sp. S23321]
gi|381358680|dbj|BAL75510.1| hypothetical protein S23_22970 [Bradyrhizobium sp. S23321]
Length = 568
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 141 KAVTFLRMNDVSQAV-DVLKSCDEMTSSAATNL-SFIYFLQGEVEQAEKMAEEACTADTY 198
+AV + + D S+ + D ++ AA NL Y+ +GE E A ++A
Sbjct: 67 RAVGWNKKGDYSKVIADATEAIRLRPGQAAYNLRGSAYYDKGEYEIAIADFDDALKLGPP 126
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+ F N GN + D+ + Y A+ + + N G+A + L + +L +
Sbjct: 127 SGTIFHNRGNAWRGKGDFTRAIADYDAAIKLEPNSAFSFQNRGIAMEALGDLDAALADIN 186
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLL 296
+ + P++P+ L +++ I GD+++A +D +E + L
Sbjct: 187 QAIRLDPTLPQPLINRTAIWRIRGDLDRAIADGSEAIRL 225
>gi|313232880|emb|CBY09563.1| unnamed protein product [Oikopleura dioica]
Length = 1060
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 17/177 (9%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGE---VEQAEKMA 189
D+ + + F RMN + +AVD D+ A L+ + + V A +
Sbjct: 203 DIRLGMGLCFYRMNKIGKAVDAFTRALEIDKRCLGALVGLAVVNLNDRDVTSVRDAITLF 262
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
A D N+ ++L N R K ++L HAL ++ EA Y LG H
Sbjct: 263 SSAYKIDKKNALVHIHLANHFFFRNQIAKAQQLAFHALHHTEHQQIRAEACYQLGRCHHK 322
Query: 247 LNEYSDSLECFHKLQAIVPSMPEV---LYQIASLYEITG---DVEQASDVNENLLLE 297
+Y + ++ QA S P+ Y + +Y G D+EQA + E +L E
Sbjct: 323 SGDYEQAFRYYN--QAANFSTPKYALPFYYLGCMYLQRGSLSDIEQAIILFEKILKE 377
>gi|410082107|ref|XP_003958632.1| hypothetical protein KAFR_0H00870 [Kazachstania africana CBS 2517]
gi|372465221|emb|CCF59497.1| hypothetical protein KAFR_0H00870 [Kazachstania africana CBS 2517]
Length = 887
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 300 DPSDATTWYHLGRVHMIRSDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 359
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 360 AYTRAIRLNPYISEVWYDLGTLYE 383
>gi|313219659|emb|CBY30580.1| unnamed protein product [Oikopleura dioica]
Length = 1060
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 17/177 (9%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGE---VEQAEKMA 189
D+ + + F RMN + +AVD D+ A L+ + + V A +
Sbjct: 203 DIRLGMGLCFYRMNKIGKAVDAFTRALEIDKRCLGALVGLAVVNLNDRDVTSVRDAITLF 262
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
A D N+ ++L N R K ++L HAL ++ EA Y LG H
Sbjct: 263 SSAYKIDKKNALVHIHLANHFFFRNQIAKAQQLAFHALHHTEHQQIRAEACYQLGRCHHK 322
Query: 247 LNEYSDSLECFHKLQAIVPSMPEV---LYQIASLYEITG---DVEQASDVNENLLLE 297
+Y + ++ QA S P+ Y + +Y G D+EQA + E +L E
Sbjct: 323 SGDYEQAFRYYN--QAANFSTPKYALPFYYLGCMYLQRGSLSDIEQAIILFEKILKE 377
>gi|119187631|ref|XP_001244422.1| hypothetical protein CIMG_03863 [Coccidioides immitis RS]
gi|392871141|gb|EAS33011.2| DnaJ and TPR domain-containing protein [Coccidioides immitis RS]
Length = 729
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 175 IYFLQGEVEQAEKMAEEACT--ADTYNSAAFVNL----------GNCAMAREDYVKGKEL 222
+++LQG+ EQA K + A + D+ + ++ + GN A Y + +L
Sbjct: 437 LFYLQGDNEQAIKHFKRALSLDPDSTQTVKYLRMVQKLLRHKDEGNAAFKARRYREAIKL 496
Query: 223 YVHALDNDATCIEA----LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
Y L+ D T + L N AH +LNEY ++E K + P+ + A Y
Sbjct: 497 YTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAIEDCTKALELDPTYSKAKRVRAKAY 556
Query: 279 EITGDVEQA---------SDVNENLLLEAVRN 301
TGD E+A S+ +E + E +RN
Sbjct: 557 GGTGDWEKALNELKSIAESNPHERGIQEEIRN 588
>gi|338810665|ref|ZP_08622906.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
gi|337277347|gb|EGO65743.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
Length = 329
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 140 NKAVTFLRMNDVSQAV---DVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
++ + +++ D +A+ D + + +SA N Y+ +G +QA +A +
Sbjct: 80 SRGIVYIKKGDYDRAIADYDQAIALNPKFASAYNNRGVAYYAKGHYDQAIADHSQAVALN 139
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
N+ A+ N GN + Y + Y A+ + + A N G+ +K +Y +++
Sbjct: 140 PKNAGAYYNRGNAYGKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDD 199
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLLEAVRNDALSQLHREM---- 311
+ A+ P Y G +A +D ++ +LL DA++ +R +
Sbjct: 200 HTQAIALEPKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNP--KDAMAYYNRGITYAD 257
Query: 312 KHEAEKCILTSAKLIA 327
K + + I+T + IA
Sbjct: 258 KGDYTRAIVTYNRAIA 273
>gi|326911667|ref|XP_003202178.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
repeat-containing protein 3-like [Meleagris gallopavo]
Length = 937
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 60/117 (51%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D+T + Y
Sbjct: 561 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLRALELDSTNADLWY 620
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L + +++L+ F++ + P L+ A L + +G+ + + + LL
Sbjct: 621 NLAIVYIELKDPTEALKNFNQALELNPMHKLALFNSALLMQESGNAQLRPEAKQRLL 677
>gi|315282421|ref|ZP_07870838.1| TPR domain-containing protein [Listeria marthii FSL S4-120]
gi|313613926|gb|EFR87653.1| TPR domain-containing protein [Listeria marthii FSL S4-120]
Length = 222
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+G +E+A K+ E +S ++N GN ++ +D+ + + + AL+ D T A Y
Sbjct: 13 EGNLEEAVKLFTEVIEEHPSDSVGYINFGNVLLSMDDFERAELFFKRALELDDTVPAAYY 72
Query: 239 NLGLAHKHLNEYSDSLECFH 258
+LG + L Y ++ + F
Sbjct: 73 SLGNLYYELERYQEAADSFQ 92
>gi|303316892|ref|XP_003068448.1| tetratricopeptide repeat containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108129|gb|EER26303.1| tetratricopeptide repeat containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 727
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 175 IYFLQGEVEQAEKMAEEACT--ADTYNSAAFVNL----------GNCAMAREDYVKGKEL 222
+++LQG+ EQA K + A + D+ + ++ + GN A Y + +L
Sbjct: 435 LFYLQGDNEQAIKHFKRALSLDPDSTETVKYLRMVQKLLRHKDEGNAAFKARRYREAIKL 494
Query: 223 YVHALDNDATCIEA----LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
Y L+ D T + L N AH +LNEY ++E K + P+ + A Y
Sbjct: 495 YTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAIEDCTKALELDPTYSKAKRVRAKAY 554
Query: 279 EITGDVEQA---------SDVNENLLLEAVRN 301
TGD E+A S+ +E + E +RN
Sbjct: 555 GGTGDWEKALNELKSIAESNPHERGIQEEIRN 586
>gi|398334730|ref|ZP_10519435.1| hypothetical protein LkmesMB_03195 [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 187
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 141 KAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADT 197
+ V L D QA + D + N+ Y +G+++QA +A +
Sbjct: 40 QGVALLGKGDFIQARSFFEKAVKLDPQSPEYVNNVGVTYLNEGKLDQAIIYFAKATERNP 99
Query: 198 YNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECF 257
AF NLG +++ K + YV + D + EA +NLG+ + + ++E +
Sbjct: 100 SYGRAFYNLGVAYQKQQNNEKAIQSYVKTVGIDDSISEAYFNLGIVYTRVGNKKQAIESY 159
Query: 258 HKLQAIVPS 266
K + P+
Sbjct: 160 QKFIDLAPA 168
>gi|340623750|ref|YP_004742203.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
gi|339904018|gb|AEK19460.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
Length = 409
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
+L + Y+ GE ++A + ++A T D + G C +E Y E + A+ D
Sbjct: 165 DLGYCYYQNGEYDKATECFDKALTLDGNLKYSLNGKGLCYEKKEQYTMAIECFDKAVCQD 224
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+A+YN G++ +YS ++ CF K + S P + A+ + G+ E+A
Sbjct: 225 ECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKANSLKSLGEYEKA 281
>gi|68472197|ref|XP_719894.1| hypothetical protein CaO19.6798 [Candida albicans SC5314]
gi|68472432|ref|XP_719777.1| hypothetical protein CaO19.14090 [Candida albicans SC5314]
gi|46441609|gb|EAL00905.1| hypothetical protein CaO19.14090 [Candida albicans SC5314]
gi|46441735|gb|EAL01030.1| hypothetical protein CaO19.6798 [Candida albicans SC5314]
Length = 1080
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 219 GKELYVHALDNDAT---CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP---SMPEVLY 272
+E +V LD D E + LG+ +KH + +LECF + P + P+V +
Sbjct: 221 AEEAFVRVLDLDPNFDKANEIYFRLGIIYKHQGKLQPALECFQYILNNPPHPLTQPDVWF 280
Query: 273 QIASLYEITGDVEQASDVNENLL 295
QI S+YE D A D E +L
Sbjct: 281 QIGSVYEQQKDWNGAKDAYEKVL 303
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 48/93 (51%)
Query: 187 KMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKH 246
K +++ D ++ ++ LG M R D+ E + A++ DA ++G+ +
Sbjct: 350 KYLKQSLEVDQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNPTFWCSIGVLYYQ 409
Query: 247 LNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
+++Y D+L+ + + + P + EV Y + +LYE
Sbjct: 410 ISQYRDALDAYTRAIRLNPYISEVWYDLGTLYE 442
>gi|414870070|tpg|DAA48627.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
gi|414870071|tpg|DAA48628.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
gi|414870072|tpg|DAA48629.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
Length = 786
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 139 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
I K + N QA++ + +SA T+ IY +G + +A + ++A A
Sbjct: 72 IGKGICLQAQNLPRQAIECFTEAVKIEPGNASALTHCGMIYKDEGHLVEAAEAYQKARMA 131
Query: 196 D-TYNSAA------FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
D +Y A+ +LG + +G + Y AL+ D A YNLG+ + +
Sbjct: 132 DPSYKPASEFLAIVLTDLGTSLKLAGNTEEGIQKYCEALEVDNHYAPAYYNLGVVYSEMM 191
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND- 302
++ +L C+ K P E + +Y+ GD++ A E L E +N+
Sbjct: 192 QFDMALSCYEKAALERPLYAEAYCNMGVIYKNRGDLDAAIICYERCLTISPNFEIAKNNM 251
Query: 303 --ALSQLHREMKHEAE 316
AL+ L ++K E +
Sbjct: 252 AIALTDLGTKVKIEGD 267
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 24/202 (11%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L ++G++ +
Sbjct: 216 NMGVIYKNRGDLDAAIICYERCLTISPNFEIAKNNMAIALTDLGTKVKIEGDINRGVAYY 275
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG ++ Y AL + C EA NLG+ +K +
Sbjct: 276 KKALYYNWHYADAMYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDN 335
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL------LEAVRNDA 303
++EC+ +I P + L + +Y + G ++ A+ + E + EA N
Sbjct: 336 LDKAVECYQMALSIKPLFAQSLNNLGVVYTVQGKMDSAASMIEKAIHANPTYAEAYNN-- 393
Query: 304 LSQLHREMK------HEAEKCI 319
L L+R+ H E+C+
Sbjct: 394 LGVLYRDAGSITLAIHAYERCL 415
>gi|195336539|ref|XP_002034893.1| GM14398 [Drosophila sechellia]
gi|194127986|gb|EDW50029.1| GM14398 [Drosophila sechellia]
Length = 1152
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 199 NVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 258
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 259 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 318
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 319 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 368
>gi|330850820|ref|YP_004376570.1| photosystem I assembly protein ycf3 [Fistulifera sp. JPCC DA0580]
gi|328835640|dbj|BAK18936.1| photosystem I assembly protein ycf3 [Fistulifera sp. JPCC DA0580]
Length = 168
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIE---ALYNLGLAHKHLNEYSDSLECFH 258
++ G A ++ Y + + Y AL + + LYN+GL + + +Y+ +LE +H
Sbjct: 31 SYYRAGMSAQSKGRYAEALQNYYEALQVEEDPYDRSYTLYNIGLIYGNTGKYTQALEFYH 90
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKC 318
+ ++ ++P+ L IA +Y ++ L +++ D +L +E+ +A +
Sbjct: 91 QALSLNSNLPQALNNIAVIYH-----------SQALRAQSLEEDEYVELSKELFDKAAEY 139
Query: 319 ILTSAKLIAPSIEDNFSNGYNWC 341
+ + KL AP DN+ NW
Sbjct: 140 WIQALKL-AP---DNYPGARNWL 158
>gi|392396908|ref|YP_006433509.1| Lipid A core--O-antigen ligase-like protein [Flexibacter litoralis
DSM 6794]
gi|390527986|gb|AFM03716.1| lipid A core-O-antigen ligase-like enyme [Flexibacter litoralis DSM
6794]
Length = 634
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A++NL N A+E+Y+KG L+ I L + + +++ +Y ++ + K+Q
Sbjct: 544 AYLNLQNPKAAKENYLKG-------LEQMPYSIALLKQVAVLYQNEKKYDSAIFHYDKMQ 596
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNE 292
I+P +PE QI + Y + GD A + E
Sbjct: 597 KIIPHLPETYQQIYNNYLLKGDTLNAKKMIE 627
>gi|226286846|gb|EEH42359.1| predicted protein [Paracoccidioides brasiliensis Pb18]
Length = 420
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%)
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
EQA + E++ AD ++ ++ LG C M++ Y K E Y A+ D ++G+
Sbjct: 328 EQAIEYLEKSVKADNGDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNPTFWGSIGV 387
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPE 269
+ +N+Y D+L+ + + + P + E
Sbjct: 388 LYYQINQYRDALDAYSRAIRLNPYISE 414
>gi|194748531|ref|XP_001956698.1| GF24452 [Drosophila ananassae]
gi|190623980|gb|EDV39504.1| GF24452 [Drosophila ananassae]
Length = 1164
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 199 NVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 258
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 259 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 318
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 319 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 368
>gi|134035048|sp|Q8BRH0.2|TMTC3_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 3
Length = 920
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 547 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 606
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 607 NLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 663
>gi|158517929|ref|NP_001103483.1| transmembrane and TPR repeat-containing protein 3 isoform 1 [Mus
musculus]
gi|148689709|gb|EDL21656.1| mCG142017, isoform CRA_a [Mus musculus]
gi|148689711|gb|EDL21658.1| mCG142017, isoform CRA_a [Mus musculus]
Length = 920
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 547 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 606
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 607 NLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 663
>gi|337287779|ref|YP_004627251.1| hypothetical protein TOPB45_0208 [Thermodesulfobacterium sp. OPB45]
gi|334901517|gb|AEH22323.1| Tetratricopeptide TPR_1 repeat-containing protein
[Thermodesulfobacterium geofontis OPF15]
Length = 252
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 142 AVTFLRMNDVSQAVDVL---KSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
A +++ N ++A++ L KS D+ L +Y + E +AE+ +EA D
Sbjct: 37 AKVYIKENRYTEALNELELAKSADKCDPEIYNLLGLVYMGKNEYLKAEENLKEAIRLDPN 96
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDND--ATCIEALYNLGLAHKHLNEYSDSLEC 256
S A+ NLG+ M + Y + E + AL+N A NLG A+ L + ++
Sbjct: 97 FSEAYNNLGSLQMLQGKYKEAIEYFNKALENPYYVNSFIARTNLGWAYYQLKDKDKAIST 156
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
P P+ L + +Y GD+ A
Sbjct: 157 LLSAFRENPRYPKTLIYLGLIYLNEGDLNSA 187
>gi|400755802|ref|YP_006564170.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
[Phaeobacter gallaeciensis 2.10]
gi|398654955|gb|AFO88925.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Phaeobacter
gallaeciensis 2.10]
Length = 730
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 159 KSCDEMTSSAAT--NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDY 216
K+C+ +SA T + +Y Q E A + ++A D+ +A NLGN + ++
Sbjct: 116 KACELNPTSATTFAAMGDVYRRQNRPEDAVALYKKALALDSTCLSALNNLGNTLLDQDRI 175
Query: 217 VKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIAS 276
++ + + A+D + LYN + L + + + + P E Y +A
Sbjct: 176 IEADQCFASAIDQAPDNAQLLYNRANIQRQLGNLGIARDLYGRAARFAPGFLEARYNLAQ 235
Query: 277 LYEITGDVEQASDVNENLLLEAVRND 302
L + GD +A E +LL +D
Sbjct: 236 LTGMAGDRVEAIRNLEQILLARPNDD 261
>gi|116621110|ref|YP_823266.1| hypothetical protein Acid_1991 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224272|gb|ABJ82981.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 399
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 10/221 (4%)
Query: 147 RMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAF 203
R D + A++ + ++ + A NL F+ G ++ E+ AD N+ A
Sbjct: 163 RTGDTAGAINAYRRAVTLSPANLDARNNLGFVLVNSGRADEGLAQFEKILAADPANNMAR 222
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI 263
VN G + + D + + + D A Y+LG+A K ++ + +
Sbjct: 223 VNAGFAYLQKADLDRAAVEFREVIRRDPESAIAHYDLGIALKQKDDLEAAKLELALALKL 282
Query: 264 VPSMPEVLYQIASLYEITGDVEQAS-DVNENLLLEAVRNDALSQLHREMKHEAEKCILTS 322
P + E Y + ++ +GD +QA+ ++ + + A L +K E +
Sbjct: 283 DPQLAEAHYTLGIIHWQSGDFDQAAREMRAAIAINPAYGGAYFMLGTALKQNGELEAAET 342
Query: 323 AKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAV 363
A A + YN Q +R DLE ++AV
Sbjct: 343 ALRAAIRYDPANPGPYNTLAQLLRQKG------DLEGSRAV 377
>gi|134117023|ref|XP_772738.1| hypothetical protein CNBK1120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255356|gb|EAL18091.1| hypothetical protein CNBK1120 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1101
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQG----EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G + E+A ++ D ++ ++ LG MA + Y K E Y A+
Sbjct: 342 LGWLYHQPGAHFADQEKAVSYLTKSLETDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAV 401
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + + +Y D+L+ + + + P + EV Y + SLYE
Sbjct: 402 YRDGRNPTFWCSIGVLYYQIAQYRDALDAYSRAIRLNPYISEVWYNLGSLYE 453
>gi|28574254|ref|NP_788449.1| CG2469, isoform B [Drosophila melanogaster]
gi|28574256|ref|NP_788448.1| CG2469, isoform A [Drosophila melanogaster]
gi|7292059|gb|AAF47472.1| CG2469, isoform B [Drosophila melanogaster]
gi|17862386|gb|AAL39670.1| LD24034p [Drosophila melanogaster]
gi|23092752|gb|AAN11469.1| CG2469, isoform A [Drosophila melanogaster]
gi|220947488|gb|ACL86287.1| CG2469-PA [synthetic construct]
Length = 1150
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 199 NVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 258
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 259 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 318
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 319 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 368
>gi|168044085|ref|XP_001774513.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674225|gb|EDQ60737.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 932
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 3/142 (2%)
Query: 149 NDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVN 205
V A+ + C ++ S A TNL IY V A + T SA + N
Sbjct: 294 GQVDGAISCYEKCLQLQDSHPQALTNLGNIYMECNMVSTAATFYKATLNVTTGLSAPYSN 353
Query: 206 LGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
L + +Y Y + D + L N G K + S++++ + + AI P
Sbjct: 354 LATIYKQQGNYADAIACYNEVMRVDPMAADGLVNRGNTLKEIGRVSEAIQDYIRAVAIRP 413
Query: 266 SMPEVLYQIASLYEITGDVEQA 287
+M E +AS Y+ +G VE A
Sbjct: 414 TMAEAHANLASAYKDSGHVEAA 435
>gi|307178712|gb|EFN67326.1| RNA polymerase-associated protein CTR9-like protein [Camponotus
floridanus]
Length = 1264
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 123 QSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQ 179
+++R + H A + + F+++N+ +A + D A LS + Q
Sbjct: 187 KALRTNPHCPAA--VRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLSVLKLNQ 244
Query: 180 GE---VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATC 233
+ ++ +M +A T D+ N +L N ++DY K + L +HA +N+A
Sbjct: 245 QQPDSIKTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMR 304
Query: 234 IEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDV 290
E+ Y L A N+Y + + +++ P +P + + +Y GD E A+
Sbjct: 305 AESCYQLARAFHVQNDYDQAFQYYYQATQFAPPVFVLPH--FGLGQMYVYRGDAENAAQC 362
Query: 291 NENLL 295
E +L
Sbjct: 363 FEKVL 367
>gi|58260608|ref|XP_567714.1| general transcriptional repressor [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229795|gb|AAW46197.1| general transcriptional repressor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1101
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQG----EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G + E+A ++ D ++ ++ LG MA + Y K E Y A+
Sbjct: 342 LGWLYHQPGAHFADQEKAVSYLTKSLETDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAV 401
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + + +Y D+L+ + + + P + EV Y + SLYE
Sbjct: 402 YRDGRNPTFWCSIGVLYYQIAQYRDALDAYSRAIRLNPYISEVWYNLGSLYE 453
>gi|357418845|ref|YP_004933713.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovirga
lienii DSM 17291]
gi|355398188|gb|AER67616.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovirga
lienii DSM 17291]
Length = 377
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 100/255 (39%), Gaps = 21/255 (8%)
Query: 101 TSAKLIAPSIEDNFSNGYNWCVQSI---RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDV 157
S L+A + E+ G++ QS + +A LA + AV + + Q +D+
Sbjct: 19 GSHPLLAATFEEYMKIGFS-AAQSGNFKKAAAAFRLAVKADPESAVAYYNLGVAYQRLDM 77
Query: 158 LKSCDEMT----------SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
LK +E S + NL I + G ++A ++ E + DT N A + N+G
Sbjct: 78 LKEAEEAYRYAIKFRPDYSGSYLNLGSILNVMGRPKEALEVLSEGLSVDTGNPALYYNIG 137
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
D K E + + + G + + Y+++ C+ K + P +
Sbjct: 138 ASFEKLGDDPKALENFKKVTQLAPDFPDGWFRCGAVFERMKGYNEAAACYRKALTLNPDL 197
Query: 268 PEVLYQIASLYEITGDVEQASDVNENLLLE------AVRNDALSQLHREMKHEAEKCILT 321
L+ + ++ GD + E L + N +++LH +A++
Sbjct: 198 ASALFNLGAVLGNMGDWSGQASYTEKFLAKRPEEALGWYNLGVARLHLGEIQKAQEAFQR 257
Query: 322 SAKLIAPSIEDNFSN 336
+ +L AP ++N
Sbjct: 258 AVEL-APDYPYGWNN 271
>gi|399991359|ref|YP_006571599.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
[Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
gi|398655914|gb|AFO89880.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 730
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 159 KSCDEMTSSAAT--NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDY 216
K+C+ +SA T + +Y Q E A + ++A D+ +A NLGN + ++
Sbjct: 116 KACELNPTSATTFAAMGDVYRRQNRPEDAVALYKKALALDSTCLSALNNLGNTLLDQDRI 175
Query: 217 VKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIAS 276
++ + + A+D + LYN + L + + + + P E Y +A
Sbjct: 176 IEADQCFASAIDQAPDNAQLLYNRANIQRQLGNLGIARDLYGRAARFAPGFLEARYNLAQ 235
Query: 277 LYEITGDVEQASDVNENLLLEAVRND 302
L + GD +A E +LL +D
Sbjct: 236 LTGMAGDRVEAIRNLEQILLARPNDD 261
>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
Length = 4079
Score = 43.1 bits (100), Expect = 0.30, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 223 YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
+ HAL++D + +AL++ GLA+ L+ YS +L F KL P E L+Q + G
Sbjct: 2443 FTHALEHDPSLSDALFHTGLAYAALSRYSPALSAFDKLLESGPQNAEALFQKGRMLAKLG 2502
Query: 283 DVEQASDVNENLL 295
++A V E L
Sbjct: 2503 RPDEALAVLETSL 2515
Score = 38.5 bits (88), Expect = 6.2, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 223 YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
+ H L D C A Y +GLA L YSD++ + + I P P+ +Y G
Sbjct: 403 FEHTLAIDPGCASAAYQIGLASASLGRYSDAVAAYDRALKIRPDYPDAVYHKGFALAKLG 462
Query: 283 DVEQA 287
+ E A
Sbjct: 463 NSEDA 467
>gi|405355263|ref|ZP_11024489.1| TPR repeat-containing protein [Chondromyces apiculatus DSM 436]
gi|397091605|gb|EJJ22407.1| TPR repeat-containing protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 639
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
NL + + +++ A + AD ++ A NLG + D K E ++ A+ D
Sbjct: 217 NLGVLLMRENDLDGAIAEYQRTLAADPKHAWAHNNLGVALNEKGDPRKATEAFLKAIAAD 276
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY-QIASLYEITGDVEQA 287
EA +NLGLA+ L + +L+ F K + P Y Q+ LY G +QA
Sbjct: 277 PKFAEAQFNLGLAYYQLGDNVRALKAFEKAVVLEPRRSSGPYTQLGHLYLTQGKKKQA 334
>gi|340905306|gb|EGS17674.1| hypothetical protein CTHT_0070140 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 877
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%)
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
+D + AF N GN A +Y + E Y A+ T L N A+ + YSD+L
Sbjct: 380 SDAEQAEAFKNKGNDAFKAGNYTQAIEFYTKAVVLQPTNSTYLSNRAAAYMSASRYSDAL 439
Query: 255 ECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + + PS P++L ++ +Y G E+A
Sbjct: 440 DDCKRAADLDPSNPKILLRLGRIYTSLGQPEEA 472
>gi|242373920|ref|ZP_04819494.1| tetratricopeptide (TPR) domain protein [Staphylococcus epidermidis
M23864:W1]
gi|242348474|gb|EES40076.1| tetratricopeptide (TPR) domain protein [Staphylococcus epidermidis
M23864:W1]
Length = 223
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND-ATCIEALY 238
GE+E+AE+ ++A T D N A + NL N Y + +LY AL N+ T ++ Y
Sbjct: 48 GEIEKAERFFQKAITIDPSNGAVYYNLANVYYNEGRYKEAIKLYQTALKNNVTTVVDYNY 107
Query: 239 NLGLAHKHLNEYSDSL 254
+G++ L + ++L
Sbjct: 108 MIGMSFNQLEAFKEAL 123
>gi|195170683|ref|XP_002026141.1| GL16176 [Drosophila persimilis]
gi|194111021|gb|EDW33064.1| GL16176 [Drosophila persimilis]
Length = 1180
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 199 NVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 258
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 259 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 318
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 319 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 368
>gi|418693615|ref|ZP_13254665.1| stage II sporulation protein E [Leptospira kirschneri str. H1]
gi|421106710|ref|ZP_15567274.1| stage II sporulation protein E [Leptospira kirschneri str. H2]
gi|409958641|gb|EKO17532.1| stage II sporulation protein E [Leptospira kirschneri str. H1]
gi|410008176|gb|EKO61851.1| stage II sporulation protein E [Leptospira kirschneri str. H2]
Length = 1060
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 130 HSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIY------FLQGEVE 183
H L DL + K V F + +V D + + + ++ IY + G+V+
Sbjct: 871 HGELTDDLSLLK-VEFQTERKADEPEEVFTGGDRIEVALSPDV--IYEDAKQLYKNGKVD 927
Query: 184 QAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
QA ++ + T DT N LG + +DY E+ + L D E + L +A
Sbjct: 928 QALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFYLSIA 987
Query: 244 HKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+K + +Y +L+ KL I P L ++ +Y + + A +V L+
Sbjct: 988 NKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEVARKLI 1039
>gi|397781376|ref|YP_006545849.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939878|emb|CCJ37133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
Length = 1067
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
I+ G E+A E+ AD ++ LG Y + Y LD + I
Sbjct: 839 IFMWLGRYEEAVACFEKVLDADPMDTLTQRRLGEANEKAGRYEEAIAAYTRVLDREPANI 898
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENL 294
E L+ A HL Y ++++ K+ I+P P VL+ ++ E G + A E
Sbjct: 899 ETLHARASALIHLGRYGEAIKSIDKIIVILPENPAVLFMRGAVLEKAGRYDDALVSYEKA 958
Query: 295 LLEAVRNDAL 304
L A +N A+
Sbjct: 959 LQVAPKNAAI 968
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 43/108 (39%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G +A E A+ + AF G + R DY + L D ++ALY
Sbjct: 164 GAYREAAACFERILRANPESPGAFARKGAALLYRGDYSGAVASFDRVLAGDPHNLDALYG 223
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
A +HL + D+ +C+ + A P L+ SL +G +A
Sbjct: 224 KARALEHLGRFQDAADCYGMITAADPGNTPALHHQGSLLLRSGRYAEA 271
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%)
Query: 203 FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQA 262
+NLG Y + + A++ D + A +N G A + + Y+D+ EC+ + A
Sbjct: 629 LLNLGVVLAVLGRYEEAAGWFGQAVEADPGDLFAWFNRGRALERMGRYADAAECYANVTA 688
Query: 263 IVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREM 311
P + +AS+ G ++A + + +L N A+++L EM
Sbjct: 689 GRPGDTGACFALASVLAELGRHQEAIEYCDRVLASDTSNAAVTKLRAEM 737
>gi|374249491|ref|YP_005088710.1| ycf3 gene product [Phaeocystis antarctica]
gi|340008182|gb|AEK26814.1| Ycf3 [Phaeocystis antarctica]
Length = 170
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHL 247
T D + ++ G A + DY + E Y AL D + I LYN+GL + +
Sbjct: 26 ATKDEKKAFSYYRYGMSAQSNGDYAEALENYYEALKLEEDPYDRSYI--LYNIGLIYGNN 83
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
+YS +LE +H+ + MP+ L IA +Y G
Sbjct: 84 GDYSKALEYYHQALDLNSKMPQALNNIAVIYHYQG 118
>gi|327402098|ref|YP_004342936.1| hypothetical protein Fluta_0088 [Fluviicola taffensis DSM 16823]
gi|327317606|gb|AEA42098.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
taffensis DSM 16823]
Length = 654
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 60/135 (44%)
Query: 160 SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
S D + + + TNL + + ++EQ+ + ++A + +++ + NLG+ A ++Y K
Sbjct: 485 SIDSLDAGSYTNLGVVSYRLNQLEQSVRYTQKAINLNPTDTSLYANLGDAYFALKNYDKA 544
Query: 220 KELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
E + + G++ +L +Y ++ F K P+ E+ + + Y
Sbjct: 545 GEALKKGVQWKDASVSHYKRYGISLFNLKQYDQAITVFKKGLQKFPNDTEIASNLGNTYG 604
Query: 280 ITGDVEQASDVNENL 294
G E+A E +
Sbjct: 605 AAGIYEKAGQTFETI 619
>gi|194337095|ref|YP_002018889.1| hypothetical protein Ppha_2065 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309572|gb|ACF44272.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 465
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 200 SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHK 259
S+A+ N N + E Y+ L+ + I ALYNLG+A++ L EY++ + C+ +
Sbjct: 238 SSAWYNRANVLAITGRIEEAAESYLKTLEYEPDDINALYNLGIAYEELEEYTEGIICYRR 297
Query: 260 LQAIVPSMPEVLYQIASLYEITGDVEQA 287
I E + +A +E + E+A
Sbjct: 298 CIEISSDFGEAWFALACCHEALEEYEEA 325
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 11/171 (6%)
Query: 126 RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQ- 184
R + S + ++ +N A+ + + +A L+ +++ ++ F Y+ +G + Q
Sbjct: 93 RAAVFSPMDSEMRLNLALAWFNTGNHDEA---LRELEDILVDSSIEKEFHYY-RGIILQR 148
Query: 185 ------AEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
AE E A D + A+ L C + Y D D I A Y
Sbjct: 149 LERFVEAESDFEYALQLDDEFADAWYELAYCKDVLGKLEESTSCYRKTHDYDPYNINAWY 208
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
N GL + Y ++L+C+ AI Y A++ ITG +E+A++
Sbjct: 209 NNGLVLSKMKSYDEALDCYDMAIAISDDFSSAWYNRANVLAITGRIEEAAE 259
>gi|299890954|gb|ADJ57453.1| photosystem I assembly protein ycf3 [uncultured prymnesiophyte
C19847]
Length = 171
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHL 247
T D + ++ G A + DY + E Y AL D + I LYN+GL +
Sbjct: 26 ATKDEKEAFSYYRYGMSAQSNGDYAEALENYYEALKLEEDPYDRSYI--LYNIGLIYSQN 83
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
+YS SLE +H+ + +P+ L IA +Y G
Sbjct: 84 GDYSKSLEYYHQALDLNGRLPQALNNIAVIYHYQG 118
>gi|442804918|ref|YP_007373067.1| tetratricopeptide TPR_1 repeat-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442740768|gb|AGC68457.1| tetratricopeptide TPR_1 repeat-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 591
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 126 RNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQA 185
+N A + LA LE + AVT+L +L+ T L IY+ +GE +A
Sbjct: 266 KNIARAYLALGLE-DSAVTYLEKGRADAGDTLLR----------TVLGIIYYKKGETGKA 314
Query: 186 EKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHK 245
++ +E + A G A+ + + K + + ++ + Y+L LA +
Sbjct: 315 YEVLDEVVVNEARRLEALKYKGKAALKEKMFEKAEGCFKKLIEFEPEEPLNYYHLALAQR 374
Query: 246 HLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
L D+L + K ++ P+ +LY A+L + GD E+A
Sbjct: 375 ELKRNHDALRTYQKGISVSPNNSMLLYNAATLLDEMGDKERA 416
>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 693
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
QG ++A K + N +N G + K E + ALD ++ +EAL
Sbjct: 519 QGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNVEALN 578
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLE 297
G+A KH+ ++ S++ F + + P P +QI Y+ G+ E+A + +N L E
Sbjct: 579 YRGVALKHMGDHDASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYEKAIESFDNALDE 637
>gi|195490356|ref|XP_002093105.1| GE21142 [Drosophila yakuba]
gi|194179206|gb|EDW92817.1| GE21142 [Drosophila yakuba]
Length = 1148
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 199 NVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 258
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 259 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 318
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 319 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 368
>gi|345860131|ref|ZP_08812457.1| tetratricopeptide repeat family protein [Desulfosporosinus sp. OT]
gi|344326772|gb|EGW38224.1| tetratricopeptide repeat family protein [Desulfosporosinus sp. OT]
Length = 234
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
+ A NL + YFL+G QA + + D + A+ NL + + Y + +
Sbjct: 88 TEARVNLGYTYFLKGNDGQAIQEFNQVLVIDPKDFDAYYNLSLVLIKEKRYNEALQKLSK 147
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
A + + + G+ +++L Y ++ + + ++P+ +++Y+I + E G +
Sbjct: 148 AGELSPRDYKVPFQKGIVYRNLKMYKEATDSLSQANKLMPANTDIIYEIGMVAEAQGQKD 207
Query: 286 QASDVNENLL-LEAVRNDALSQLHR 309
+A+ + + +L + + A++ L R
Sbjct: 208 EATQIYKQVLSYDPLYKPAIAALER 232
>gi|194864807|ref|XP_001971117.1| GG14779 [Drosophila erecta]
gi|190652900|gb|EDV50143.1| GG14779 [Drosophila erecta]
Length = 1150
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 199 NVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 258
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 259 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 318
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 319 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 368
>gi|428777844|ref|YP_007169631.1| hypothetical protein PCC7418_3302 [Halothece sp. PCC 7418]
gi|428692123|gb|AFZ45417.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
PCC 7418]
Length = 467
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
Y Q +++A + E+ + A+ LG E K ++ Y+ A+ D+
Sbjct: 17 YINQQRLQEAFTLCEQMIKEHPDFAPAYQTLGKVFHLTEQVEKAEQCYLKAIALDSNSAV 76
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
A NLG + ++ +L C+ K + P P++ +A L+ +GD +A++
Sbjct: 77 AHTNLGSLYGQQKQFKKALSCYQKALTLEPKEPKIYQNLARLWGKSGDSNRATE 130
>gi|381157497|ref|ZP_09866731.1| Tfp pilus assembly protein PilF [Thiorhodovibrio sp. 970]
gi|380881360|gb|EIC23450.1| Tfp pilus assembly protein PilF [Thiorhodovibrio sp. 970]
Length = 806
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
+A L+ + +G +++A +AEE ++ + A + G A+ R D +
Sbjct: 352 TARARLATLAVAEGRIDEALALAEEVLAEESQHEQALLVRGAIALDRGDTAQALADTRTI 411
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
L N + A+ L H NE + + E L A P P +Q+A L +GD+E
Sbjct: 412 LRNRPESLPAMRLLAQVHLAKNELALAQEALRNLIAAAPDEPRPYFQLAELQANSGDLEG 471
Query: 287 ASDVNENLL 295
A ++LL
Sbjct: 472 AKMTLDDLL 480
>gi|388581285|gb|EIM21594.1| TPR-like protein [Wallemia sebi CBS 633.66]
Length = 655
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 204 VNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI 263
+ LG Y K+ + ALD + C+ AL LG+ H +L+E +S+E +HK +I
Sbjct: 510 LGLGQAYRKTRQYNNSKDQLLKALDLNPNCVVALSTLGIIHNYLDEIEESIEIYHKSLSI 569
Query: 264 VPS 266
P
Sbjct: 570 QPG 572
>gi|197123058|ref|YP_002135009.1| hypothetical protein AnaeK_2655 [Anaeromyxobacter sp. K]
gi|196172907|gb|ACG73880.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
Length = 610
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%)
Query: 156 DVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMARED 215
++L + + A L Y G E+AE++ + + A +G AR D
Sbjct: 450 EILAVRPDAQADALVQLGVAYEQLGRAEEAEQLYARVLAREHRHPDALWRMGVRRWARGD 509
Query: 216 YVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA 275
+L+ A+ + AL +LGLA + + F + AI P++P V Y++
Sbjct: 510 PPGAVQLWERAIAAEPRHAPALSDLGLAAYAAGDLQGAEARFREATAIAPTLPGVWYKLG 569
Query: 276 SLYEITGDVEQA 287
+ E G E+A
Sbjct: 570 VVCEQRGRREEA 581
>gi|31874611|emb|CAD98046.1| hypothetical protein [Homo sapiens]
gi|117646410|emb|CAL38672.1| hypothetical protein [synthetic construct]
Length = 914
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 58/117 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + H L E +++L+ F++ + P L+ + + +G+V+ + + LL
Sbjct: 602 NLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSVIVMQESGEVKLRPEARKRLL 658
>gi|159904074|ref|YP_001551418.1| hypothetical protein P9211_15331 [Prochlorococcus marinus str. MIT
9211]
gi|159889250|gb|ABX09464.1| Hypothetical protein P9211_15331 [Prochlorococcus marinus str. MIT
9211]
Length = 557
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 21/187 (11%)
Query: 148 MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
+ND++QA++ D A NL+F + E ++A + EA D + +F N G
Sbjct: 31 INDLTQAIN----QDSTHHIALFNLAFCKQMNKEFKEAINLYSEAIKLDYRDPFSFNNRG 86
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL------Q 261
+C +DY K Y A+ ++ I+ N AH Y D++ + K +
Sbjct: 87 SCYEEIKDYSKAINDYSKAIKRNSKEIQFYLNRAEAHDKNQNYKDAIRDYTKYLKKKNNE 146
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDV----NENLLLEAVR-------NDALSQLHRE 310
++ + Y I + D E+ S V +LL+A R N A ++ R
Sbjct: 147 DVLSRRAYLRYLIGNYKLAIKDYEKLSTVFDQATSEILLKAKRLQKEIDANKAFKEIERT 206
Query: 311 MKHEAEK 317
K + EK
Sbjct: 207 RKQQEEK 213
>gi|428225412|ref|YP_007109509.1| family 2 glycosyl transferase [Geitlerinema sp. PCC 7407]
gi|427985313|gb|AFY66457.1| glycosyl transferase family 2 [Geitlerinema sp. PCC 7407]
Length = 389
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
A++NLGN +A + +E Y A+ D T +A YNLG+A K L + S ++ + +
Sbjct: 271 GAYLNLGNLQLAAGEAALARETYETAIAVDPTLAKAHYNLGMALKALGQLSGAIAAYQRA 330
Query: 261 QAIVPSMPE 269
P E
Sbjct: 331 LQFAPDYAE 339
>gi|321263865|ref|XP_003196650.1| general transcriptional repressor [Cryptococcus gattii WM276]
gi|317463127|gb|ADV24863.1| General transcriptional repressor, putative [Cryptococcus gattii
WM276]
Length = 1105
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 172 LSFIYFLQG----EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
L ++Y G + E+A ++ D ++ ++ LG MA + Y K E Y A+
Sbjct: 342 LGWLYHQPGAHFADQEKAVSYLTKSLETDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAV 401
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D ++G+ + + +Y D+L+ + + + P + EV Y + SLYE
Sbjct: 402 YRDGRNPTFWCSIGVLYYQIAQYRDALDAYSRAIRLNPYISEVWYNLGSLYE 453
>gi|198462498|ref|XP_001352454.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
gi|198150850|gb|EAL29950.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
Length = 1193
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 199 NVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 258
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 259 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 318
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 319 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 368
>gi|380510346|ref|ZP_09853753.1| putative polysaccharide deacetylase family protein, partial
[Xanthomonas sacchari NCPPB 4393]
Length = 138
Score = 42.7 bits (99), Expect = 0.33, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 34/74 (45%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
AA NL FIY+ QG+ QA + E D + A+VNLG+ D K K + L
Sbjct: 60 AANNLGFIYYRQGKYAQAVRWLENTLKIDPSRAVAYVNLGDAYRQLGDTAKAKRAFQTYL 119
Query: 228 DNDATCIEALYNLG 241
+ T A Y G
Sbjct: 120 ELQPTGASAAYVRG 133
>gi|326432559|gb|EGD78129.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
Length = 931
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 127 NSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAE 186
N+ ++ A E ++A+ ++ ++ V+ + T+S NL Y +G+ ++A
Sbjct: 358 NNLGNAYADKGEYDRAIAYVE-KALAITVETVGEKHPSTASTYGNLGNAYDSKGDHDKAV 416
Query: 187 KMAEEA-------------CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL------ 227
E+A TADTYN NLG ++ DY K +LY AL
Sbjct: 417 HFYEKALAIKVETLGEKHPSTADTYN-----NLGGAYDSKGDYKKAIQLYEKALAIQVET 471
Query: 228 --DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQIASL 277
+ + NLG A+ EY +++ + K AI PS +
Sbjct: 472 LGEKHPSTASTYNNLGNAYASKGEYDRAVQQYEKALAIYAEALGEKHPSTASTYGNLGVA 531
Query: 278 YEITGDVEQASDVNENLLLEAVRNDALSQLH 308
Y+ G ++A ++ E L A+R +AL + H
Sbjct: 532 YQNKGHYDKAIELYEKAL--AIRVEALGEKH 560
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 26/178 (14%)
Query: 155 VDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEA-------------CTADTYN-- 199
V+ L T+S NL Y +GE ++A + E+A TA TY
Sbjct: 469 VETLGEKHPSTASTYNNLGNAYASKGEYDRAVQQYEKALAIYAEALGEKHPSTASTYGNL 528
Query: 200 SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY-NLGLAHKHLNEYSDSLECFH 258
A+ N G+ A E Y K + V AL Y NLG+A+++ EY ++E +
Sbjct: 529 GVAYQNKGHYDKAIELYEKALAIRVEALGEKHPSTATSYGNLGVAYQNKGEYDKAIEFYE 588
Query: 259 KLQAIV--------PSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLH 308
K AI PS + + Y G ++A + E L A++ + L + H
Sbjct: 589 KDLAITVETLGERHPSTADTYNNLGEAYRHKGKYDKAIEFYEQGL--AIKVETLGEKH 644
>gi|241953747|ref|XP_002419595.1| general transcriptional co-repressor, putative [Candida
dubliniensis CD36]
gi|223642935|emb|CAX43190.1| general transcriptional co-repressor, putative [Candida
dubliniensis CD36]
Length = 1076
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYV 224
T + S+ F Q ++ A K +++ D ++ ++ LG M R D+ E +
Sbjct: 340 TPANGATQSYKPFQQ-DLNIALKYLKQSLDIDQSDAHSWYYLGRVEMIRGDFTAAYEAFQ 398
Query: 225 HALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
A++ DA ++G+ + +++Y D+L+ + + + P + EV Y + +LYE
Sbjct: 399 QAVNRDARNPTFWCSIGVLYYQISQYRDALDAYTRAIRLNPYISEVWYDLGTLYE 453
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 220 KELYVHALDNDAT---CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP---SMPEVLYQ 273
+E +V LD D E + LG+ +KH + +LECF + P + P+V +Q
Sbjct: 233 EEAFVRVLDLDPNFDKANEIYFRLGIIYKHQGKLQPALECFQYILNNPPHPLTQPDVWFQ 292
Query: 274 IASLYEITGDVEQASDVNENLL-LEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 332
I S+ E D A + E +L + L QL C+ + A+ P+ +
Sbjct: 293 IGSVLEQQKDWNGAKEAYEKVLQVNPHHAKVLQQL---------GCLYSQAESNPPTPAN 343
Query: 333 NFSNGYNWCVQSIRNSAHSSLAQDLEINKA 362
+ Y Q + N A L Q L+I+++
Sbjct: 344 GATQSYKPFQQDL-NIALKYLKQSLDIDQS 372
>gi|118375025|ref|XP_001020699.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89302466|gb|EAS00454.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 318
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
SA NL +++ Q + +A++ E+A D + NLGN + + K+ ++ A
Sbjct: 159 SAYINLGNLFYQQNLLTEAKQQFEKALQLDPLDYKCLYNLGNIYIDMQMLEDAKQYFLKA 218
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQ 286
L+ + + NLGL + + + + +CF K I P+ + +A LY
Sbjct: 219 LEINPQYVNGHNNLGLVYIDMKMFQQAKQCFLKALEIDPTSYKSYAYLAELYA------- 271
Query: 287 ASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKL 325
H+EM EA++C L + ++
Sbjct: 272 ---------------------HQEMLEEAQQCFLKALQI 289
>gi|308174051|ref|YP_003920756.1| hypothetical protein BAMF_2160 [Bacillus amyloliquefaciens DSM 7]
gi|307606915|emb|CBI43286.1| conserved hypothetical protein [Bacillus amyloliquefaciens DSM 7]
Length = 434
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 158 LKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYV 217
LK D SS L+ + +G E A K A+E T D YN F+ G A+ +
Sbjct: 241 LKGLDPSYSSLYMPLAKSFEAEGMYEDALKTAKEGITYDEYNKELFLYAGKMALKLGNED 300
Query: 218 KGKELYVHALDNDATCIEALYNLGLAHKHLNE-YSDSLECFHKLQAIVPSMPEVLYQIAS 276
+GK+L AL D +EAL+ L LA H E + + ++ +++ P+ + +AS
Sbjct: 301 EGKKLLQEALALDPGYVEALHTL-LAVYHKEESFEEIIDLIQEVRGYGEEDPKYNWYLAS 359
Query: 277 LYEITGDVEQASDVNENL 294
Y TG +EQ ++ ++
Sbjct: 360 AY--TG-LEQYAEAKKSF 374
>gi|118411013|ref|YP_874408.1| photosystem I assembly protein ycf3 [Phaeodactylum tricornutum]
gi|171473020|sp|A0T0D3.1|YCF3_PHATC RecName: Full=Photosystem I assembly protein ycf3
gi|116739760|gb|ABK20631.1| photosystem I assembly protein ycf3 [Phaeodactylum tricornutum]
Length = 168
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIE---ALYNLGLAHKHLNEYSDSLECFH 258
++ G A ++ Y + + Y AL + + LYN+GL + + +Y+ +LE +H
Sbjct: 31 SYYRAGMSAQSKGRYAEALQNYYEALQVEEDPYDRSYTLYNIGLIYGNTGKYTQALEFYH 90
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKC 318
+ ++ ++P+ L IA +Y ++ L +++ D +L +E+ +A +
Sbjct: 91 QALSLNANLPQALNNIAVIYH-----------SQALRAQSLEEDEYIELSKELFDKAAEY 139
Query: 319 ILTSAKLIAPSIEDNFSNGYNWCVQSIR 346
+ + KL AP DN+ NW + R
Sbjct: 140 WIQALKL-AP---DNYPGARNWLKVTGR 163
>gi|348025951|ref|YP_004765756.1| tetratricopeptide repeat protein [Megasphaera elsdenii DSM 20460]
gi|341822005|emb|CCC72929.1| tetratricopeptide repeat protein [Megasphaera elsdenii DSM 20460]
Length = 216
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 190 EEACTADTYNSAAFVN-------LGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
++A + D +N A N GN + D +G EL AL + + YNL L
Sbjct: 73 DKALSMDAHNYQALSNKGVTLAMRGNSTGNKNDVAQGIELIEKALKIAPKDVASFYNLAL 132
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNE---NLLLEAV 299
A+K +Y +L F + A P Y IA++Y G +QA + +L E V
Sbjct: 133 AYKIDGQYDKALTYFKNVIAADPGNTWSYYGIATIYGDLGKADQALPYLKQAIDLGGEDV 192
Query: 300 RNDALSQLH 308
R A +Q H
Sbjct: 193 RQAARTQSH 201
>gi|428772521|ref|YP_007164309.1| hypothetical protein Cyast_0684 [Cyanobacterium stanieri PCC 7202]
gi|428686800|gb|AFZ46660.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
stanieri PCC 7202]
Length = 173
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 207 GNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAI 263
G A A +Y + E Y AL ++ + E LYN+GL H + ++L+ +H+ A+
Sbjct: 42 GMSAQADGEYAEALENYEEALKLEEDPSDRSEILYNMGLIHASNGKLEEALDYYHQCLAL 101
Query: 264 VPSMPEVLYQIASLYEITGD 283
P P L IA LY GD
Sbjct: 102 NPRKPSALNNIAVLYHYQGD 121
>gi|425450472|ref|ZP_18830298.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 7941]
gi|389768683|emb|CCI06276.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 7941]
Length = 1254
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 20/236 (8%)
Query: 178 LQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
L GE+E A+ +A D + ++ NLG A + + Y A+++ A
Sbjct: 993 LTGELESAKNFYLQAIKVDATYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPTAF 1052
Query: 238 YNLGLAHKHLNEYSDSLECF-HKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
YNLGL ++ L E ++ C+ H +Q +M EV +A LY+ + +A LL
Sbjct: 1053 YNLGLVYEQLEETEKAIACYSHSVQLDSTNM-EVYKSLAQLYDRQENYAKAEKYYRCALL 1111
Query: 297 EAVRNDALSQLHREMKHEAE---KCILTSAKLIAPSIEDNFSN---GYNWCVQSIRNSAH 350
N L + +E E K + K+I +D + G ++ Q + A
Sbjct: 1112 LQPDNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAK 1171
Query: 351 SSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSF 394
S + +E+ N V + D +AVD + CD A T L F
Sbjct: 1172 SCFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDCFRQCLRCDPANKLAHTALLF 1227
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 153 QAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMA 212
QA+ V D + + NL F+ QG++E+A ++A + AF NLG
Sbjct: 1006 QAIKV----DATYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPTAFYNLGLVYEQ 1061
Query: 213 REDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY 272
E+ K Y H++ D+T +E +L + Y+ + + + + P E+ Y
Sbjct: 1062 LEETEKAIACYSHSVQLDSTNMEVYKSLAQLYDRQENYAKAEKYYRCALLLQPDNLELRY 1121
Query: 273 QIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAK 324
+ + ++A + +++A DA++ LH + ++ +K +LT AK
Sbjct: 1122 NLGVVLYEQEKFDKAVSCFQK-IIQAKPQDAIAYLHLGISYKQQK-LLTKAK 1171
>gi|295132200|ref|YP_003582876.1| aerotolerance-related protein BatC [Zunongwangia profunda SM-A87]
gi|294980215|gb|ADF50680.1| aerotolerance-related protein BatC [Zunongwangia profunda SM-A87]
Length = 304
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 139 INKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQ---GEVE----QAEKM 188
+N+A L ND + A + D ++A N+ +Y+ + GE + +A K+
Sbjct: 44 MNQAEEALSENDFAGAEAAYRKAIAKDPSNTTAKYNMGNLYYNREKSGESQSRFVEANKV 103
Query: 189 AEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
+E N NLGN M ++ Y + E Y +AL ND T E YNL LA K L
Sbjct: 104 SENKEDRHKINH----NLGNSFMKQKKYKEAVEAYKNALRNDPTDDETRYNLALAKKKLE 159
Query: 249 E 249
E
Sbjct: 160 E 160
>gi|298493172|ref|YP_003723349.1| family 2 glycosyl transferase ['Nostoc azollae' 0708]
gi|298235090|gb|ADI66226.1| glycosyl transferase family 2 ['Nostoc azollae' 0708]
Length = 434
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
+ NLGN D++ K Y A+ D + + YNLG+ K + ++++C+ K
Sbjct: 316 GGYNNLGNLLKVSADFLGAKNAYETAIKIDPSFVTGYYNLGMVCKAMGSLVEAIDCYDKA 375
Query: 261 QAIVPSMPEVLYQIASLYEITGDVE 285
+ P E + + GDVE
Sbjct: 376 IQLNPDYAEAYQNLGVVLLKAGDVE 400
>gi|282163899|ref|YP_003356284.1| hypothetical protein MCP_1229 [Methanocella paludicola SANAE]
gi|282156213|dbj|BAI61301.1| hypothetical protein [Methanocella paludicola SANAE]
Length = 244
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 131 SSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDE---MTSSAATNLSFIYFLQGEVEQAEK 187
++ DL + +A RM ++A++ ++ E ++ A +Y+ +G + A
Sbjct: 31 GEISPDLLLCEAGALSRMGSFARALECIEKALEKNPISPDAWFLKGLLYYQRGNLMAALG 90
Query: 188 MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHL 247
EEA D + A GNC +Y + E Y A+ D +A YN G+ +
Sbjct: 91 YLEEALDIDPKHVEARSVAGNCHYYMGEYKEALEYYETAIKIDRAYPKAWYNKGVVLSDI 150
Query: 248 NEYSDSLECFHKLQAIVPSMPEV 270
Y+++++C+ ++ I P + V
Sbjct: 151 RLYNEAIQCYEEVLRINPGVAVV 173
>gi|124026346|ref|YP_001015462.1| hypothetical protein NATL1_16401 [Prochlorococcus marinus str.
NATL1A]
gi|123961414|gb|ABM76197.1| Hypothetical protein NATL1_16401 [Prochlorococcus marinus str.
NATL1A]
Length = 779
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 153 QAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC 209
+A+ + K C + + + NLSF+Y+ ++E AEK+ EEA G
Sbjct: 75 KAIRLYKKCAKSFPNHIYSKLNLSFLYYKLNQLEIAEKIIEEAIQLKPSMPNGHCIRGLI 134
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHK 259
+ Y + + + A++ D +A NLGL +K N+Y+++ EC+ K
Sbjct: 135 LKGLDKYDESRLSFEKAIELDKNYFDAYINLGLLNKDSNKYNEAEECYLK 184
>gi|427715538|ref|YP_007063532.1| Photosystem I assembly protein ycf3 [Calothrix sp. PCC 7507]
gi|427347974|gb|AFY30698.1| Photosystem I assembly protein ycf3 [Calothrix sp. PCC 7507]
Length = 173
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 207 GNCAMAREDYVKGKELYVHAL-----DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
G A A +Y + + Y AL ND I YN+GL H ++ +LE +H+
Sbjct: 42 GMSAQAEGEYAEALDYYEEALTLEEDSNDRGYI--FYNMGLIHASNGDHEKALELYHQAL 99
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKH------EA 315
+ P +P+ L IA +Y G E+A + +N EA+ + A R ++ EA
Sbjct: 100 ELNPRLPQALNNIAVIYHYKG--EKAKEDGDNDAGEALFDQAADYWVRAIRLAPNNYIEA 157
Query: 316 EKCILTSAKL 325
+ + T+ ++
Sbjct: 158 QNWLKTTGRV 167
>gi|401886944|gb|EJT50955.1| hypothetical protein A1Q1_07928 [Trichosporon asahii var. asahii
CBS 2479]
Length = 197
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 24/150 (16%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMA-REDYVKGKELYVHALDNDATCIEAL 237
QG+V++A+ + E++ A S AF NLG C RE +K L+ A +A
Sbjct: 60 QGDVQKAKDLYEQSAAA-LPTSGAFFNLGVCEYQLRESSIK--------LEPSA---DAY 107
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQA---IVPSMPEVLYQIASLYEITGDVEQA----SDV 290
NLG A+ +++ ++ E L A I P PE+ Y +A++ E T +EQA
Sbjct: 108 TNLGSAY-MMSQPPNAPEAIKALTAALEIAPEDPEIQYNLAAILEATNSLEQALALYKKA 166
Query: 291 NENLLLEA---VRNDALSQLHREMKHEAEK 317
+ + A VRN L + MK E +K
Sbjct: 167 HSGGIERAATNVRNVGAKILAQRMKEEEQK 196
>gi|126339403|ref|XP_001364802.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Monodelphis domestica]
Length = 912
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ ALD D + + Y
Sbjct: 541 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKESYLRALDLDRSNADLWY 600
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L F + + P+ L+ A L + +G+ + + + LL
Sbjct: 601 NLAIVNIELKESTEALRNFDRALKMNPNHKLALFNSALLMQESGEAKVRPEAKKRLL 657
>gi|344240174|gb|EGV96277.1| Transmembrane and TPR repeat-containing protein 3 [Cricetulus
griseus]
Length = 916
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVYIELKEPNEALKNFNRALELNPKHKLSLFNSAILMQESGEVKLRPEARKRLL 658
>gi|418321433|ref|ZP_12932779.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|418875558|ref|ZP_13429814.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|365225665|gb|EHM66908.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|377769630|gb|EHT93398.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC93]
Length = 222
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFFNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|384547851|ref|YP_005737104.1| hypothetical protein SAOV_1618 [Staphylococcus aureus subsp. aureus
ED133]
gi|417896853|ref|ZP_12540796.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21235]
gi|298694900|gb|ADI98122.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
gi|341840119|gb|EGS81639.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21235]
Length = 222
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D+ N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDSKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|320038307|gb|EFW20243.1| DnaJ and TPR domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 535
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 175 IYFLQGEVEQAEKMAEEACT--ADTYNSAAFVNL----------GNCAMAREDYVKGKEL 222
+++LQG+ EQA K + A + D+ + ++ + GN A Y + +L
Sbjct: 266 LFYLQGDNEQAIKHFKRALSLDPDSTETVKYLRMVQKLLRHKDEGNAAFKARRYREAIKL 325
Query: 223 YVHALDNDATCIEA----LYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
Y L+ D T + L N AH +LNEY ++E K + P+ + A Y
Sbjct: 326 YTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAIEDCTKALELDPTYSKAKRVRAKAY 385
Query: 279 EITGDVEQA---------SDVNENLLLEAVRN 301
TGD E+A S+ +E + E +RN
Sbjct: 386 GGTGDWEKALNELKSIAESNPHERGIQEEIRN 417
>gi|374851237|dbj|BAL54204.1| DNA-directed RNA polymerase subunit alpha, partial [uncultured
planctomycete]
Length = 426
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Query: 134 AQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAE 190
A + + +A + R + A ++L+ ++++ + L +Y +G E+A E
Sbjct: 123 ASQVRLLRAEVYRRQGKLKAAREILEELRDLSTHSGEYHYQLGKLYLEEGGREKAAAHFE 182
Query: 191 EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN----DATCIEALYNLGLAHKH 246
A D ++AA+ LG D E +H L+ + ALYNLG+ ++
Sbjct: 183 RAVELDPNHAAAWFELGFL----NDLAGNDEEAIHCLERCIAQPPVHVGALYNLGVLYED 238
Query: 247 LNEYSDSLECFHKLQAIVPS 266
++Y ++ CF +L P+
Sbjct: 239 NHQYDRAIACFERLVRAFPT 258
>gi|414079487|ref|YP_007000911.1| photosystem I assembly protein Ycf3 [Anabaena sp. 90]
gi|413972766|gb|AFW96854.1| photosystem I assembly protein Ycf3 [Anabaena sp. 90]
Length = 173
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 207 GNCAMAREDYVKGKELYVHALD-----NDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
G A A +Y + + Y AL+ ND + I LYN GL + ++ +LE +H+
Sbjct: 42 GMSAQAEGEYAEALDYYKEALEMEEDSNDRSYI--LYNTGLIYASNGDHDKALEYYHQAI 99
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKH------EA 315
+ P +P+ L IA +Y G E+A + ++ EA+ + A R ++ EA
Sbjct: 100 ELNPQLPQALNNIAVIYHFQG--ERAKEAGDHDGGEALFDQAADYWIRAIRMAPNNYIEA 157
Query: 316 EKCILTSAK 324
+ I T+ +
Sbjct: 158 QNWIKTTGR 166
>gi|195441399|ref|XP_002068497.1| GK20387 [Drosophila willistoni]
gi|194164582|gb|EDW79483.1| GK20387 [Drosophila willistoni]
Length = 1185
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAE---KMA 189
++ I A FL+M + +A + D+ A L+ + Q E E + +M
Sbjct: 199 NVRIGMAHCFLKMGNPVKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQML 258
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKH 246
+A T D N +L N ++DY K L +HA +N+A E+ Y L +
Sbjct: 259 SKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHA 318
Query: 247 LNEYSDSLECFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
++Y + + +++ I P+ +P Y + +Y GD E A+ E +L
Sbjct: 319 QSDYDQAFQYYYQSTQIAPANFVLPH--YGLGQMYIYRGDTENAAQCFEKVL 368
>gi|327272790|ref|XP_003221167.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like
[Anolis carolinensis]
Length = 917
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
+E+A+++ +A + A+++ G + ++ KE Y+ AL+ D T + YNL
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLQAKEAYLRALELDRTNADLWYNL 603
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ + L + +++L+ F++ + P+ L+ A L + +GD + + LL
Sbjct: 604 AIVYIELKDPTEALKNFNRALELNPNHKLALFNSALLMQESGDARLRPEARKRLL 658
>gi|359460872|ref|ZP_09249435.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris sp. CCMEE 5410]
Length = 810
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
NL ++F+QG++E A K ++A A++ + +A VN G+ A D ++ + AL+
Sbjct: 482 NLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSALGDSDGAEQDWERALELP 541
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + G A L+ D++ +++ I P + + ++ G++EQA
Sbjct: 542 VRTAKEYTSRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGEIEQA 598
>gi|354482924|ref|XP_003503645.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Cricetulus griseus]
Length = 921
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 547 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 606
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 607 NLAIVYIELKEPNEALKNFNRALELNPKHKLSLFNSAILMQESGEVKLRPEARKRLL 663
>gi|319952791|ref|YP_004164058.1| hypothetical protein [Cellulophaga algicola DSM 14237]
gi|319421451|gb|ADV48560.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
Length = 284
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 155 VDVLKSCDEMT--SSAATNLSFIYFLQGEVEQA---EKMAEEACTADTYNSAAFVNLGNC 209
VD K+ + T S+A+ NL Y+ +A K A E T+ A+ N+GN
Sbjct: 56 VDYRKAIAKSTENSAASYNLGNAYYSNESFNEAFTRYKQAGETATSKEDKHKAYHNMGNV 115
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHL 247
M + Y K E Y AL N+ T E YNL LA + L
Sbjct: 116 FMKEKQYEKAVEAYKQALRNNPTDEETRYNLALAQEML 153
>gi|168054571|ref|XP_001779704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668902|gb|EDQ55500.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +++ ++C ++ ++ A TNL IY + A + + T SA + NL
Sbjct: 286 VEESISCYENCLQLQNNHPQALTNLGNIYMEWNMISTAATFYKATLSVTTGLSAPYSNLA 345
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y + D + L N G K + S++++ + + AI P+M
Sbjct: 346 TIYKQQGNYADAIACYNEVMRVDPMAADGLVNRGNTLKEIGRVSEAIQDYIRAVAIRPTM 405
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 406 AEAHANLASAYKDSGHVEAA 425
>gi|291613071|ref|YP_003523228.1| hypothetical protein Slit_0601 [Sideroxydans lithotrophicus ES-1]
gi|291583183|gb|ADE10841.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 698
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 9/193 (4%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
V F +M ++A+ +++ + + A NL I G +++A A +
Sbjct: 20 GVLFNQMGRNAEALGPMRNAITLLPNDAEAHGNLGIILNGLGMLDEAAASYRRAIQLNPN 79
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
+ + NLGN MA+ + K ++ Y L A E NLG+ K + + ++ C+
Sbjct: 80 VAGWYFNLGNIFMAQGKWQKSEDCYQCVLMLKADFPEVYNNLGIIRKAMGQPVEAEACYR 139
Query: 259 KLQAIVPSMPEVLYQIASLYEITG-DVEQASDVNENLLLEAVRNDALSQLHREMK----- 312
+ I P+ + + S+ + G VE + LE R ++ S L ++
Sbjct: 140 RAIEIRPNYADAYNNLGSVLQYLGRPVEAEVSYKHAIQLEPARAESYSNLGNTLQELGRY 199
Query: 313 HEAEKCILTSAKL 325
HEAE + + +L
Sbjct: 200 HEAEASLRRALQL 212
>gi|299822831|ref|ZP_07054717.1| TPR domain protein [Listeria grayi DSM 20601]
gi|299816360|gb|EFI83598.1| TPR domain protein [Listeria grayi DSM 20601]
Length = 243
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 172 LSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDA 231
L Y +G++E+A K E + ++N GN ++ +D+ + + + AL+ D
Sbjct: 26 LGITYMQEGKLEEAVKTFTEVIEENPEEPIGYLNFGNVLLSMDDFERAELFFNRALELDN 85
Query: 232 TCIEALYNLGLAHKHLNEYSDSLECF 257
T A Y+LG + L Y + E F
Sbjct: 86 TIPAAYYSLGSLYYELERYQKAAETF 111
>gi|189347285|ref|YP_001943814.1| hypothetical protein Clim_1796 [Chlorobium limicola DSM 245]
gi|189341432|gb|ACD90835.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
245]
Length = 465
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAE----- 190
++++N A+ + + +A+++ + ++ ++ F Y+ +++ ++ +E
Sbjct: 103 EMQLNLALAYFNTGEFDEALEIFE---QVFVDSSIEREFHYYRGIVLQRKDRFSEAQSDF 159
Query: 191 EACT-ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
E C D S A+ L C + + Y LD D I A YN GL L
Sbjct: 160 ERCLLIDPEFSDAWYELAYCKDILGKLEESIDCYDKTLDIDPYNINAWYNRGLVFSKLKR 219
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
Y ++LE + AI Y A++ ITG +E+A++
Sbjct: 220 YDEALESYDMSLAIADDFSSAWYNRANVLAITGKIEEAAE 259
>gi|427720339|ref|YP_007068333.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
gi|427352775|gb|AFY35499.1| serine/threonine protein kinase with TPR repeats [Calothrix sp. PCC
7507]
Length = 670
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 80/223 (35%), Gaps = 38/223 (17%)
Query: 75 NARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 134
+A+A L+Q + KH A + L IE S G AHS L
Sbjct: 479 DAKAYYQRGLAQFSNQQKHAAVSDFTNAINLSPKYIEAYLSRG----------DAHSELG 528
Query: 135 QDLEINKAVTFLRMNDVSQAVDV-LKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEAC 193
LE D ++ + + KS A SF G+V+ A K +A
Sbjct: 529 NKLEATA--------DYNKVLQINPKSSIAYVRRGAHRFSF-----GDVQGAIKDYTQAI 575
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
D+ N+AA+ N GN + R + E Y A+ + + A YN GL + +
Sbjct: 576 KLDSKNAAAYNNRGNVHLERGNQKAASEDYSQAIKVNPSYALAYYNRGLIKAKQGNRASA 635
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
+ F Q A L+E G+ E D + L
Sbjct: 636 IGDFQ--------------QAAKLFEKKGNKEGYQDAQSQIKL 664
>gi|57650502|ref|YP_186515.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
COL]
gi|87162270|ref|YP_494272.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195429|ref|YP_500233.1| hypothetical protein SAOUHSC_01724 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221733|ref|YP_001332555.1| hypothetical protein NWMN_1521 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161509847|ref|YP_001575506.1| tetratricopeptide domain-containing protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221141110|ref|ZP_03565603.1| tetratricopeptide domain-containing protein [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|258450553|ref|ZP_05698615.1| TPR domain-containing protein [Staphylococcus aureus A5948]
gi|262048615|ref|ZP_06021498.1| hypothetical protein SAD30_1011 [Staphylococcus aureus D30]
gi|262051275|ref|ZP_06023499.1| hypothetical protein SA930_1706 [Staphylococcus aureus 930918-3]
gi|282920167|ref|ZP_06327892.1| tetratricopeptide domain-containing protein [Staphylococcus aureus
A9765]
gi|284024677|ref|ZP_06379075.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
132]
gi|294848649|ref|ZP_06789395.1| tetratricopeptide domain-containing protein [Staphylococcus aureus
A9754]
gi|304380783|ref|ZP_07363450.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379014827|ref|YP_005291063.1| hypothetical protein SAVC_07350 [Staphylococcus aureus subsp.
aureus VC40]
gi|384862220|ref|YP_005744940.1| hypothetical protein SAA6008_01590 [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384870160|ref|YP_005752874.1| Tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus T0131]
gi|387143223|ref|YP_005731616.1| hypothetical protein SATW20_16150 [Staphylococcus aureus subsp.
aureus TW20]
gi|415686190|ref|ZP_11450327.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|417649380|ref|ZP_12299184.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21189]
gi|418277946|ref|ZP_12892166.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21178]
gi|418285639|ref|ZP_12898307.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21209]
gi|418318491|ref|ZP_12929893.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21232]
gi|418571847|ref|ZP_13136067.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21283]
gi|418579543|ref|ZP_13143638.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418598001|ref|ZP_13161515.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21343]
gi|418641905|ref|ZP_13204110.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|418648457|ref|ZP_13210501.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|418650560|ref|ZP_13212578.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|418872840|ref|ZP_13427166.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|418903925|ref|ZP_13457966.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418906564|ref|ZP_13460590.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418912229|ref|ZP_13466210.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|418925878|ref|ZP_13479780.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928968|ref|ZP_13482854.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418946734|ref|ZP_13499146.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|418953567|ref|ZP_13505556.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|419773240|ref|ZP_14299251.1| anaphase-promoting complex, cyclosome, subunit 3 [Staphylococcus
aureus subsp. aureus CO-23]
gi|422742596|ref|ZP_16796599.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422746085|ref|ZP_16800018.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785454|ref|ZP_18212257.1| Tetratricopeptide repeat (TPR) family protein [Staphylococcus
aureus CN79]
gi|440707456|ref|ZP_20888155.1| putative TPR-containing protein YrrB [Staphylococcus aureus subsp.
aureus 21282]
gi|440735070|ref|ZP_20914681.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|57284688|gb|AAW36782.1| TPR domain protein [Staphylococcus aureus subsp. aureus COL]
gi|87128244|gb|ABD22758.1| TPR domain protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202987|gb|ABD30797.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374533|dbj|BAF67793.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368656|gb|ABX29627.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257861711|gb|EEV84510.1| TPR domain-containing protein [Staphylococcus aureus A5948]
gi|259160912|gb|EEW45932.1| hypothetical protein SA930_1706 [Staphylococcus aureus 930918-3]
gi|259163262|gb|EEW47821.1| hypothetical protein SAD30_1011 [Staphylococcus aureus D30]
gi|269941106|emb|CBI49492.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282594515|gb|EFB99500.1| tetratricopeptide domain-containing protein [Staphylococcus aureus
A9765]
gi|294824675|gb|EFG41098.1| tetratricopeptide domain-containing protein [Staphylococcus aureus
A9754]
gi|302751449|gb|ADL65626.1| tetratricopeptide domain-containing protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340659|gb|EFM06592.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|315198683|gb|EFU29011.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|320140493|gb|EFW32347.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144032|gb|EFW35801.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329314295|gb|AEB88708.1| Tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus T0131]
gi|329728486|gb|EGG64923.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21189]
gi|365169449|gb|EHM60697.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21209]
gi|365172905|gb|EHM63567.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21178]
gi|365242954|gb|EHM83649.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21232]
gi|371978339|gb|EHO95588.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21283]
gi|374363524|gb|AEZ37629.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
VC40]
gi|374400309|gb|EHQ71427.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21343]
gi|375018360|gb|EHS11940.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|375026370|gb|EHS19753.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|375027846|gb|EHS21204.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|375366780|gb|EHS70761.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|375374787|gb|EHS78410.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|375377514|gb|EHS80976.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|377697570|gb|EHT21925.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377722486|gb|EHT46612.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|377738880|gb|EHT62889.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742940|gb|EHT66925.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377744947|gb|EHT68924.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377763469|gb|EHT87325.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|383973064|gb|EID89085.1| anaphase-promoting complex, cyclosome, subunit 3 [Staphylococcus
aureus subsp. aureus CO-23]
gi|421956864|gb|EKU09193.1| Tetratricopeptide repeat (TPR) family protein [Staphylococcus
aureus CN79]
gi|436431165|gb|ELP28519.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|436506212|gb|ELP42051.1| putative TPR-containing protein YrrB [Staphylococcus aureus subsp.
aureus 21282]
Length = 222
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFFNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|444321058|ref|XP_004181185.1| hypothetical protein TBLA_0F01230 [Tetrapisispora blattae CBS 6284]
gi|387514229|emb|CCH61666.1| hypothetical protein TBLA_0F01230 [Tetrapisispora blattae CBS 6284]
Length = 1189
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP------EVLYQIASLYEITGDVEQAS 288
E + LG+ +KH +++ +LECF + I+P++P ++ +QI ++ E D A
Sbjct: 177 EIYFRLGIIYKHQGKWAQALECF---KYILPNLPVPLQEWDIWFQIGTVLENMSDWTSAK 233
Query: 289 DVNENLLLEAVRN-DALSQL 307
D E++LL+ R+ AL QL
Sbjct: 234 DAYEHVLLQNERHAKALQQL 253
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 281 DPSDATTWYHLGRIHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 340
Query: 256 CFHKLQAIVPSMPEVLYQIASLYE 279
+ + + P + EV Y + +LYE
Sbjct: 341 AYTRAIRLNPYISEVWYDLGTLYE 364
>gi|345326658|ref|XP_003431070.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Ornithorhynchus anatinus]
Length = 906
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 532 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLRALELDRNNADLWY 591
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L + ++L+ F++ + P L+ A L + +GD + + + LL
Sbjct: 592 NLAIVYIELKDPPEALQNFNRALELSPKHRLALFNSALLMQESGDAKLRPEAKKRLL 648
>gi|338212278|ref|YP_004656333.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336306099|gb|AEI49201.1| Tetratricopeptide TPR_1 repeat-containing protein [Runella
slithyformis DSM 19594]
Length = 747
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 128 SAHSSLAQDLEINKAVTFLRMNDVSQAVDV----LKSCDEMTSSAA-TNLSFIYFLQGEV 182
+ H ++ L I + T L +++ +A ++ LK D AA L + Q +
Sbjct: 225 TGHHAVGARLLIQRGNTHLALHEYERAEELYREYLKLKDPSYRFAAHLGLGHTLYRQRKY 284
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
+ A AC + Y++ A+++LGN + + ++ + ALD D+T A LG+
Sbjct: 285 QLAVLEYNAACRHNDYSAEAWLSLGNAYIGTNGQRQAQKAFKRALDLDSTQKSAWLGLGM 344
Query: 243 AHKHLNEYSDSLECF 257
+ L + +++ CF
Sbjct: 345 VYYRLQNFGEAVGCF 359
>gi|448097087|ref|XP_004198585.1| Piso0_001965 [Millerozyma farinosa CBS 7064]
gi|359380007|emb|CCE82248.1| Piso0_001965 [Millerozyma farinosa CBS 7064]
Length = 720
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 171 NLSFIYFLQG-EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN 229
N++ Y LQ E++Q++ + ++ LG M R DY E + A++
Sbjct: 292 NIALKYLLQSLEIDQSD-------------AHSWYYLGRVHMMRGDYNAAYEAFQQAVNR 338
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYE 279
D+ ++G+ + +++Y D+L+ + + + P + EV Y + +LYE
Sbjct: 339 DSRNPTFWCSIGVLYYQISQYRDALDAYTRAIRLNPYISEVWYDLGTLYE 388
>gi|88603991|ref|YP_504169.1| hypothetical protein Mhun_2755 [Methanospirillum hungatei JF-1]
gi|88189453|gb|ABD42450.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 234
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 34/129 (26%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSA----------------------------- 201
N+ FL GE ++A +M EA DT NS
Sbjct: 78 NIGRTLFLLGEYDKAIEMCLEATALDTQNSIAWYYAATAYYELNQYEKAIEYFHKALALN 137
Query: 202 -----AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
A+ NLGN M R +Y + ++Y ALD+D +A YN G+ Y +S+
Sbjct: 138 QSFALAWNNLGNVHMQRGEYDEAFKVYNKALDSDRNLTQAWYNRGVLLFATKRYCESVRA 197
Query: 257 FHKLQAIVP 265
F ++ I P
Sbjct: 198 FEEVMRIKP 206
>gi|322434142|ref|YP_004216354.1| hypothetical protein AciX9_0502 [Granulicella tundricola MP5ACTX9]
gi|321161869|gb|ADW67574.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
tundricola MP5ACTX9]
Length = 313
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 151 VSQAVDVLKSCDEMT---SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V++A+ V +S E+ + A NL I++ + + + AE+M A AD+ + AF +LG
Sbjct: 161 VNEAMRVYESLLELKPDHAPACINLGTIFYNRKDFDGAERMYRRATEADSQYALAFFDLG 220
Query: 208 NC--AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVP 265
N M R D + E Y A++ + +A YNL LA++ E +L + + P
Sbjct: 221 NVLDEMLRLD--EAIEAYGRAIELVPSYADAHYNLALAYERSGEKRRALRHWMAYVRLDP 278
Query: 266 SMP 268
P
Sbjct: 279 VGP 281
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
++ A +NLG R+D+ + +Y A + D+ A ++LG + +++E +
Sbjct: 178 HAPACINLGTIFYNRKDFDGAERMYRRATEADSQYALAFFDLGNVLDEMLRLDEAIEAYG 237
Query: 259 KLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ +VPS + Y +A YE +G+ +A
Sbjct: 238 RAIELVPSYADAHYNLALAYERSGEKRRA 266
>gi|376316947|emb|CCG00325.1| exported protein [uncultured Flavobacteriia bacterium]
Length = 277
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 25/42 (59%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLA 243
AF NLGN ++DY K E Y +AL ND T E YNL LA
Sbjct: 101 AFHNLGNAFYQQKDYKKAVEAYKNALRNDPTDDETRYNLALA 142
>gi|355570991|ref|ZP_09042261.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354826273|gb|EHF10489.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 1104
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 3/151 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N+ V + +N A+ S + + A N Y GE E A +A + +
Sbjct: 76 NRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIADFSKAISLN 135
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+AA+ N G R + K E Y A + D + EAL+N G+ L + D++
Sbjct: 136 PSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLGHFEDAVAD 195
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + I P ++LY Y G E A
Sbjct: 196 YTRALEITPEKADILYNRGLAYGKLGQSEAA 226
>gi|29839817|ref|NP_828923.1| type III secretion chaperone [Chlamydophila caviae GPIC]
gi|29834164|gb|AAP04801.1| type III secretion chaperone, putative [Chlamydophila caviae GPIC]
Length = 335
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 34/134 (25%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAM-------AREDYVKGKE------- 221
+FL GE EQAE+ +E D + A+ LG A+ A KG E
Sbjct: 19 FFLSGEYEQAERRLKETLELDPKAALAYCYLGIIALELGRIPEALTWCTKGLESEPGDSY 78
Query: 222 ---LYVHALDNDATCIEAL-----------------YNLGLAHKHLNEYSDSLECFHKLQ 261
Y ALD D C EA+ ++LG + L Y +++ECF ++
Sbjct: 79 LRYCYGVALDRDNRCEEAIEQYRAYIILHPDDAECWFSLGGVYHRLGRYIEAIECFDRIL 138
Query: 262 AIVPSMPEVLYQIA 275
+ P P+ +Y A
Sbjct: 139 ELDPWNPQSMYNKA 152
>gi|406955606|gb|EKD84014.1| hypothetical protein ACD_39C00303G0002, partial [uncultured
bacterium]
Length = 675
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEACTAD 196
N + + + S+A+D + C E+ S L Y+ G+ +QA + E+A +
Sbjct: 46 NLGIAYYNKGEDSKAIDYWEKCLEVRSHDPEIHFKLGIAYYNLGKEDQAISLWEKAANLN 105
Query: 197 TYNSAAFVNLGNC------------AMAREDYVKGK---------------ELYVHALDN 229
+S F LG A ++ + K E+Y A+D
Sbjct: 106 PDDSDIFFRLGVAYYNKGLDDKSVIAFSKSIELNPKNSEAHNNLAIVFYRLEMYQQAIDE 165
Query: 230 DATCI-------EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
+ E NLG A+ LN++ +++E + K+ + P EV +++ S Y
Sbjct: 166 WKKALALSPRQPEIFNNLGNAYSKLNQHREAIETWQKILDLTPENSEVYFKLGSAYGKLD 225
Query: 283 DVEQA 287
D+E+A
Sbjct: 226 DLEKA 230
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEA 192
D+ N A + +A+++ K + S A L Y+ +G +QA + ++A
Sbjct: 518 DILSNLATAYHNREMYDKAIEIWKRVIKYNPQDSEARNKLGIAYYNKGMYDQAIDLWKKA 577
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGK-----ELYVHALDNDATCIEALYNLGLAHKHL 247
+ ++AA+ N+G E++ KG+ Y+ L+ D I+ YNL + +
Sbjct: 578 IELNPKDAAAYYNIGT-----EEFEKGRINEAITAYMKVLEIDPKFIQVYYNLAVIYARK 632
Query: 248 NEYSDSLECFHKLQAIVPSMPE 269
++ D+++ + P+ E
Sbjct: 633 RQFRDAVDAARRFLNHTPTGVE 654
>gi|363727609|ref|XP_416131.3| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Gallus gallus]
Length = 918
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D T + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLRALELDRTNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L + +++L+ F++ + P L+ A L + +G+ + + + LL
Sbjct: 602 NLAIVYIELKDPTEALKNFNQALELNPMHKLALFNSALLMQESGNAQLRPEAKQRLL 658
>gi|379795976|ref|YP_005325974.1| tetratricopeptide repeat family protein [Staphylococcus aureus
subsp. aureus MSHR1132]
gi|356872966|emb|CCE59305.1| tetratricopeptide repeat family protein, putative [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 222
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D+ N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDSQNGIVFYNLANIYYNQQRYQESIKLYQQALRTNIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLEAFKQAL 122
>gi|427731903|ref|YP_007078140.1| glycosyl transferase family protein [Nostoc sp. PCC 7524]
gi|427367822|gb|AFY50543.1| glycosyl transferase [Nostoc sp. PCC 7524]
Length = 395
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
A+ NLGN A D K+ Y AL D YNLG+ K + ++D++ C+ K
Sbjct: 277 GAYNNLGNLLKAVGDINGAKKAYETALKIDPNFAIGYYNLGMIFKAVGMFTDAIACYQKA 336
Query: 261 QAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDA-----LSQLHREM 311
+ P E + + G+V+ + +N +L +N+ L Q REM
Sbjct: 337 IRLQPKYAEAYQNLGVVQLKVGNVQASVTAFKNAILLHEQNNPQEANRLRQGLREM 392
>gi|427707084|ref|YP_007049461.1| Photosystem I assembly protein ycf3 [Nostoc sp. PCC 7107]
gi|427359589|gb|AFY42311.1| Photosystem I assembly protein ycf3 [Nostoc sp. PCC 7107]
Length = 173
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 207 GNCAMAREDYVKGKELYVHAL-----DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
G A A +Y + E Y AL ND + I YN+GL + + +LE +HK
Sbjct: 42 GMSAQAEGEYAEALEYYEEALTLEEDSNDRSYI--FYNMGLIYASNGNHQKALELYHKAI 99
Query: 262 AIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKH------EA 315
+ P +P+ L IA +Y G E+A + ++ EA+ + A R ++ EA
Sbjct: 100 ELNPRIPQALNNIAVIYHYQG--EKAKEAGDHDGGEALFDQAADYWIRAIRMAPNNYIEA 157
Query: 316 EKCILTSAKL 325
+ + T+ ++
Sbjct: 158 QNWLKTTGRM 167
>gi|428775859|ref|YP_007167646.1| hypothetical protein PCC7418_1230 [Halothece sp. PCC 7418]
gi|428690138|gb|AFZ43432.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
PCC 7418]
Length = 675
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%)
Query: 176 YFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIE 235
Y Q +QA + ++ + A+ LG ++ D + Y HA+ + C E
Sbjct: 17 YLDQQRFQQAISLCQQMIQETPQFAPAYQILGKASLGINDLQTAAKAYQHAIALEPNCPE 76
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNEN 293
NLGL ++ ++ C+ K I P V +A L+E +E A + E
Sbjct: 77 NYANLGLVRAQQQQWQEAHNCYQKALEIKPDFAGVYRHLARLWEQLNQLESAVEAWER 134
>gi|45655974|ref|YP_000060.1| hypothetical protein LIC10060 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417762960|ref|ZP_12410943.1| stage II sporulation protein E [Leptospira interrogans str.
2002000624]
gi|417767958|ref|ZP_12415893.1| stage II sporulation protein E [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|417774621|ref|ZP_12422485.1| stage II sporulation protein E [Leptospira interrogans str.
2002000621]
gi|417785291|ref|ZP_12432996.1| stage II sporulation protein E [Leptospira interrogans str. C10069]
gi|418672441|ref|ZP_13233780.1| stage II sporulation protein E [Leptospira interrogans str.
2002000623]
gi|418689224|ref|ZP_13250346.1| stage II sporulation protein E [Leptospira interrogans str. FPW2026]
gi|418707632|ref|ZP_13268452.1| stage II sporulation protein E [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418725779|ref|ZP_13284395.1| stage II sporulation protein E [Leptospira interrogans str. UI 12621]
gi|421087729|ref|ZP_15548565.1| stage II sporulation protein E [Leptospira santarosai str. HAI1594]
gi|421123090|ref|ZP_15583372.1| stage II sporulation protein E [Leptospira interrogans str. Brem 329]
gi|421124705|ref|ZP_15584962.1| stage II sporulation protein E [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135159|ref|ZP_15595284.1| stage II sporulation protein E [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|45599207|gb|AAS68697.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400349403|gb|EJP01696.1| stage II sporulation protein E [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400361369|gb|EJP17335.1| stage II sporulation protein E [Leptospira interrogans str. FPW2026]
gi|409941016|gb|EKN86650.1| stage II sporulation protein E [Leptospira interrogans str.
2002000624]
gi|409952080|gb|EKO06594.1| stage II sporulation protein E [Leptospira interrogans str. C10069]
gi|409960987|gb|EKO24736.1| stage II sporulation protein E [Leptospira interrogans str. UI 12621]
gi|410020577|gb|EKO87377.1| stage II sporulation protein E [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410343834|gb|EKO95029.1| stage II sporulation protein E [Leptospira interrogans str. Brem 329]
gi|410429978|gb|EKP74353.1| stage II sporulation protein E [Leptospira santarosai str. HAI1594]
gi|410437836|gb|EKP86935.1| stage II sporulation protein E [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410575463|gb|EKQ38481.1| stage II sporulation protein E [Leptospira interrogans str.
2002000621]
gi|410580569|gb|EKQ48391.1| stage II sporulation protein E [Leptospira interrogans str.
2002000623]
gi|410772053|gb|EKR47247.1| stage II sporulation protein E [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 1061
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+V+QA ++ + T DT N LG + +DY E+ + L D E +
Sbjct: 925 GKVDQALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFY 984
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L +A+K + +Y +L+ KL I P L ++ +Y + + A +V + L+
Sbjct: 985 LSIANKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEVAKKLI 1040
>gi|115477811|ref|NP_001062501.1| Os08g0559300 [Oryza sativa Japonica Group]
gi|75325353|sp|Q6YZI0.1|SPY_ORYSJ RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY
gi|45736106|dbj|BAD13137.1| putative gibberellin action negative regulator SPY [Oryza sativa
Japonica Group]
gi|113624470|dbj|BAF24415.1| Os08g0559300 [Oryza sativa Japonica Group]
gi|215686860|dbj|BAG89710.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 927
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD-TYNSAA------FVNLGNCAMARE 214
D + A T IY +G + +A + ++A AD +Y AA +LG
Sbjct: 98 DPGNACALTYCGMIYKDEGHLVEAAEAYQKARNADPSYKPAAEFLAIVLTDLGTSLKLAG 157
Query: 215 DYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQI 274
+ +G + Y AL+ D+ A YNLG+ + + ++ +L C+ K P E +
Sbjct: 158 NTEEGIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDLALTCYEKAALERPLYAEAYCNM 217
Query: 275 ASLYEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
+Y+ G++E A E L E +N+ AL+ L ++K E +
Sbjct: 218 GVIYKNRGELEAAIACYERCLTISPNFEIAKNNMAIALTDLGTKVKIEGD 267
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A T+L ++G++ Q ++A + + + A NLG ++ Y AL
Sbjct: 254 ALTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEMLNFEMAIVFYELAL 313
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ C EA NLG+ +K + ++EC+ +I P+ + L + +Y + G ++ A
Sbjct: 314 HFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 373
Query: 288 SDV 290
S +
Sbjct: 374 SSM 376
>gi|119356544|ref|YP_911188.1| hypothetical protein Cpha266_0709 [Chlorobium phaeobacteroides DSM
266]
gi|119353893|gb|ABL64764.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
DSM 266]
Length = 465
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 223 YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
Y ALD+D I A YN GL L Y ++L+C+ A+ Y A++ ITG
Sbjct: 193 YNKALDHDPYNINAWYNNGLVLSKLKRYDEALQCYDMSLALADDFSSAWYNRANVLAITG 252
Query: 283 DVEQASD 289
+E+A++
Sbjct: 253 KIEEAAE 259
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 200 SAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHK 259
S+A+ N N + E YV L+ + + ALYNLG+A++ L EYS+++ C+ +
Sbjct: 238 SSAWYNRANVLAITGKIEEAAESYVKTLEFEPDDLNALYNLGIAYEELEEYSEAILCYRR 297
Query: 260 LQAIVPSMPEVLYQIASLYE 279
+ + + +A YE
Sbjct: 298 CIELNNDFHDAWFALACCYE 317
>gi|169783906|ref|XP_001826415.1| protein bimA [Aspergillus oryzae RIB40]
gi|83775159|dbj|BAE65282.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869501|gb|EIT78698.1| DNA-binding cell division cycle control protein [Aspergillus oryzae
3.042]
Length = 808
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 125 IRNSAHSSLAQDLEINKAVTFLRMNDVSQA--VDVLKSCDEMTSSAATNLSFIYFLQGEV 182
+RN A S L D+EI V + ND+ A L D ++ A + + Q +
Sbjct: 541 VRNIAPSRL-DDMEIYSTVLWHLKNDIELAYLAHELMEVDRLSPQAWCAIGNSFSHQRDH 599
Query: 183 EQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
+QA K + A D++ + F G+ +A E+Y K + Y H + D+ A Y LG
Sbjct: 600 DQALKCFKRATQLDSHFAYGFTLQGHEYVANEEYDKALDAYRHGISADSRHYNAWYGLGT 659
Query: 243 AHKHLNEYSDSLECFHKLQAIVPS 266
+ + + + + F +I P+
Sbjct: 660 VYDKMGKLDFAEQHFRNAASINPT 683
>gi|403345942|gb|EJY72354.1| hypothetical protein OXYTRI_06649 [Oxytricha trifallax]
Length = 396
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A N + +Y G E+A+ + +E D +AA VN+GN + Y + LY+ AL
Sbjct: 183 AKVNQALVYKDMGNYERAQAILQEVIDQDPNEAAAKVNMGNIYQIQSKYEQAAILYLEAL 242
Query: 228 DNDATCIEALYNLGLAHKHLNEYSD 252
+ D +AL NLGL + +Y+D
Sbjct: 243 EIDLNDEDALCNLGLVLSRI-QYND 266
>gi|303253478|ref|ZP_07339620.1| hypothetical protein APP2_2159 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248625|ref|ZP_07530639.1| Cps2D [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|34147958|gb|AAQ62556.1| Cps2D [Actinobacillus pleuropneumoniae]
gi|302647722|gb|EFL77936.1| hypothetical protein APP2_2159 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854836|gb|EFM87025.1| Cps2D [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 1287
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 20/166 (12%)
Query: 147 RMNDVSQAVDVLKSCDEMTSSAATNLSFIY-----------FLQGE--VEQAEKMAEEAC 193
+ N + Q+VD S E S + + + Y FLQ EQA+ ++ +
Sbjct: 165 KQNKLWQSVD---SWGEAISRDSVHAEWFYQYGIVLEKLGHFLQASKAYEQAKSLSMKEN 221
Query: 194 TADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDS 253
+D Y FVN D K+ Y A+ D + +G+ H+H ++ +
Sbjct: 222 LSDLYFRLGFVNENQGHDNEIDLEVAKQAYGLAIQADRKLRAKDFGIGVFHEHRRDWGRA 281
Query: 254 LECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
+ + I P+ PE+LY++ Y+ QA EN+ EA+
Sbjct: 282 IIAYKAQLEITPNNPELLYRLGFAYDRNYQFGQA----ENIYKEAL 323
>gi|291389700|ref|XP_002711424.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 3
[Oryctolagus cuniculus]
Length = 916
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+V+ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYVSRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F+ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVYIELKEPNEALKNFNHALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|257075530|ref|ZP_05569891.1| TPR repeat-containing protein [Ferroplasma acidarmanus fer1]
Length = 405
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
KA+ + M +A++ E+ + A N S IY Q + E A + AE A +
Sbjct: 150 GKAMAYSYMEKFPEALEEYNRVIEIEPNFGEAYYNRSIIYLDQDKFEDAIRDAERAMDLE 209
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ F +GN A E Y + + Y A++ D+ A Y++G+ + ++ YS+++E
Sbjct: 210 SDVPDNFDLMGNILAAMEKYEEALKYYGEAIELDSRFAAAYYDMGIMYDNMKNYSNAIEN 269
Query: 257 FHKLQAIV 264
+ K +V
Sbjct: 270 YDKAIKLV 277
>gi|421104405|ref|ZP_15565000.1| stage II sporulation protein E [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410365857|gb|EKP21250.1| stage II sporulation protein E [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
Length = 1061
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+V+QA ++ + T DT N LG + +DY E+ + L D E +
Sbjct: 925 GKVDQALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFY 984
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L +A+K + +Y +L+ KL I P L ++ +Y + + A +V + L+
Sbjct: 985 LSIANKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEVAKKLI 1040
>gi|338530109|ref|YP_004663443.1| hypothetical protein LILAB_02190 [Myxococcus fulvus HW-1]
gi|337256205|gb|AEI62365.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 639
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
NL + + +++ A + AD +++A N+G + D K + ++ A+ D
Sbjct: 217 NLGVLLMRENDLDGAIAEYQRTLAADPKHASAHNNMGVALNEKGDPRKATQAFLKAIAAD 276
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY-QIASLYEITGDVEQA 287
EA +NLGLA+ L + +L+ F K + P Y Q+ LY G +QA
Sbjct: 277 PKFAEAHFNLGLAYYQLGDNVRALKAFEKAVVLEPRRSSGPYTQLGHLYLTQGKKKQA 334
>gi|312282561|dbj|BAJ34146.1| unnamed protein product [Thellungiella halophila]
Length = 762
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS----------AATNLSFIYFLQGEVEQAEKMA 189
N V + D+ A+ + C ++ + A T+L L+G+V Q
Sbjct: 87 NMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDVSQGVAYY 146
Query: 190 EEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNE 249
++A + + + A NLG + Y A + C EA NLG+ +K +
Sbjct: 147 KKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDN 206
Query: 250 YSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL------EAVRNDA 303
++EC+ +I P+ + L + +Y + G ++ A+ + E +L EA N
Sbjct: 207 LDKAVECYQMALSIKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNN-- 264
Query: 304 LSQLHRE 310
L L+R+
Sbjct: 265 LGVLYRD 271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 218 KGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASL 277
+G + Y AL D A YNLG+ + + +Y +L C+ K P E + +
Sbjct: 32 EGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDSALSCYEKAALERPMYAEAYCNMGVI 91
Query: 278 YEITGDVEQASDVNENLL-----LEAVRND---ALSQLHREMKHEAE 316
Y+ GD+E A E L E +N+ AL+ L ++K E +
Sbjct: 92 YKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGD 138
>gi|297538184|ref|YP_003673953.1| hypothetical protein M301_0992 [Methylotenera versatilis 301]
gi|297257531|gb|ADI29376.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera versatilis
301]
Length = 1193
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 11/178 (6%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A NL+ + + Q +A ++A + S A+V LG A + + A+
Sbjct: 176 AMCNLAQVLYEQDFFSEAIIYFQQALSIQDNFSIAYVGLGAAFQATGQLPGAEANFRKAI 235
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ EAL NLG K L S++ C+ L I P + ++ SL + G++ ++
Sbjct: 236 AINPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTITPENFDTYIKLGSLLKSMGNIAES 295
Query: 288 SDVNENLL-----LEAVRNDALSQLHREMKH-EAEKCILTSAKLIAPSIEDNFSNGYN 339
+ + L LE +ND L + ++ EAE C + K IE NF YN
Sbjct: 296 TACFKKALSINSQLEEAQNDLGLALAEQGRYSEAEACYQNAIK-----IEPNFWKAYN 348
>gi|384253147|gb|EIE26622.1| O-linked N-acetylglucosamine transferase [Coccomyxa subellipsoidea
C-169]
Length = 937
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 170 TNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDN 229
T+L + G E+ +A + + AF N+G R ++ KELY A+
Sbjct: 203 TDLGTKLKVSGRPEEGFAKYRQAASICAAYAPAFYNIGVIHSERREFSAAKELYARAIAA 262
Query: 230 DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA-SLYEITGDVEQAS 288
+ EA NLG+ HK +++ + + AI P V +A +L E+ V+ A
Sbjct: 263 NPGYAEAHCNLGVIHKEEGRLEEAIAAYERALAIAPEFAIVSNNLAIALTEMGTRVKVAG 322
Query: 289 DVNENLLL 296
D+ + L
Sbjct: 323 DMAGGIAL 330
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 178 LQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
+ G++ + E A T + ++ A NLG + LY A+ + +C EA
Sbjct: 320 VAGDMAGGIALYERALTFNAKHADALYNLGVACGETGQVARAIFLYELAVHFNPSCAEAW 379
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
NLG+ + + + + C+ + P+ P+ L +A ++ G + A
Sbjct: 380 NNLGVLQRDMGNFERAFSCYQAALQLRPNFPQGLNNLAVIFTAQGRAQDA 429
>gi|401408423|ref|XP_003883660.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
gi|325118077|emb|CBZ53628.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
Length = 987
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 166 SSAATNLSFIYFLQGEVEQAEK---MAEEACTADTYNSAAFVNLGNCAMAREDYVKGKEL 222
S+ A L+ + Q E A+K + ++A + Y S A+ NLG + K
Sbjct: 364 SNMAVALTDLGTQQKTFEGAKKAISLYKKALIYNPYYSDAYYNLGVAYADSHKFDKALVN 423
Query: 223 YVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITG 282
Y A+ + C EA N+G+ HK ++ C++K I P + L + LY TG
Sbjct: 424 YQLAVAFNPRCAEAYNNMGVIHKDRENTDQAIVCYNKALEINPDFSQTLNNLGVLYTCTG 483
Query: 283 DVEQA 287
+ +A
Sbjct: 484 KIGEA 488
>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
repeats [uncultured archaeon]
Length = 425
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 6/176 (3%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N+ +T+ + +A++ E+ + A N Y + E+A + + D
Sbjct: 240 NRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELD 299
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
++AA+ N GN E+Y + E + ++ D+ + YN GL + L +Y ++E
Sbjct: 300 PNSAAAYNNRGNAYRKLEEYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIED 359
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA-SDVNENLLLEAVRNDALSQLHREM 311
F+K + P+ + + ++ G E+A D N+ + L+ ND + +RE+
Sbjct: 360 FNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDYNKAIELDP--NDTDAYENREL 413
>gi|426196817|gb|EKV46745.1| hypothetical protein AGABI2DRAFT_193373 [Agaricus bisporus var.
bisporus H97]
Length = 216
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 207 GNCAMAREDYVKGKELYVHA--LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
G + D KELY + + +A+ +L+NLG+ H HL EY D++ + + +
Sbjct: 55 GTAKLEEGDVQAAKELYKRSASIKRNAS---SLFNLGVTHYHLKEYDDAIAAWKESVTLQ 111
Query: 265 PSMPEVLYQIASLYEIT 281
PS P+ +AS Y I+
Sbjct: 112 PSSPDAHINLASAYIIS 128
>gi|357131539|ref|XP_003567394.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 980
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 142 AVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTY 198
A F++ D S+AV K + S A NL +Y G + A + A A
Sbjct: 233 AGLFMQWGDPSKAVLYYKEAIKYKPSFYDAHLNLGNLYKAVGMHQDAIVCYQNAVRASPD 292
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFH 258
N A+ L N + Y A++ +++ +EA NLG A K + +++ C+
Sbjct: 293 NDIAYGTLANTYYEQGQLDLAIRSYRQAINCNSSYVEAYNNLGNALKDAGKSDEAIGCYE 352
Query: 259 KLQAIVPSMPEVLYQIASLY 278
K A+ PS P+ L + ++Y
Sbjct: 353 KCLALQPSHPQALTNLGNVY 372
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%)
Query: 171 NLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDND 230
N++ + +G+++ A ++ + A + A+ NL N + + K Y A+ +
Sbjct: 129 NMANAWREKGDIDCAIQLYDHATKLRPTFADAWANLANAYTRKGNLSKAVGCYHQAIALN 188
Query: 231 ATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
++A NLG K YSD+ C+ ++ PS Y IA L+ GD +A
Sbjct: 189 PRLVDAYCNLGDVLKAQGLYSDAYNCYVNALSVEPSSANAWYYIAGLFMQWGDPSKA 245
>gi|26336877|dbj|BAC32122.1| unnamed protein product [Mus musculus]
Length = 753
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 547 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 606
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 607 NLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 663
>gi|429123311|ref|ZP_19183844.1| TPR domain-containing protein [Brachyspira hampsonii 30446]
gi|426280911|gb|EKV57915.1| TPR domain-containing protein [Brachyspira hampsonii 30446]
Length = 493
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 143 VTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQ---GEVEQAEKMAE---EACTAD 196
+T N+++Q +++K+ ++M N + Y+L E+E+ K E +A +
Sbjct: 280 ITKFYDNNINQYKEIIKAYNDMIKENPENNQYYYYLSELYKEIEEYNKAIELYNQAIEVN 339
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ + ++++ ++Y K E+ A++ND+ IEA LG ++ L + +
Sbjct: 340 PNDFSYYISIAALYEYIKEYDKAVEMLKKAIENDSDNIEAYIALGDLYEKLGSIEERNDA 399
Query: 257 FHKLQAIVPSMPEV--LYQIASLYEITGDVEQASD 289
+ K I + I +LYE GD+E+ +D
Sbjct: 400 YKKAIEIYNKEDDAYSFEDIGNLYEKLGDIEKRND 434
>gi|409081579|gb|EKM81938.1| hypothetical protein AGABI1DRAFT_112127 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 216
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 207 GNCAMAREDYVKGKELYVHA--LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIV 264
G + D KELY + + +A+ +L+NLG+ H HL EY D++ + + +
Sbjct: 55 GTAKLEEGDVQAAKELYKRSASIKRNAS---SLFNLGVTHYHLKEYDDAIAAWKESVTLQ 111
Query: 265 PSMPEVLYQIASLYEIT 281
PS P+ +AS Y I+
Sbjct: 112 PSSPDAHINLASAYIIS 128
>gi|148689710|gb|EDL21657.1| mCG142017, isoform CRA_b [Mus musculus]
Length = 754
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 548 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 607
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 608 NLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 664
>gi|326430054|gb|EGD75624.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 785
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 165 TSSAATNLSFIYFLQGEVEQAEKMAEEAC-------------TADTYNSAAFV--NLGNC 209
T+ A NL Y +GE ++A + ++A TA +YN+ N G
Sbjct: 399 TAVAYNNLGAAYHGKGEFDKAAECYQKALAIRVEALGEKHPNTAASYNNLGIACSNDGQY 458
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALY-NLGLAHKHLNEYSDSLECFHKLQAIV---- 264
A E+Y K KE++V L ++Y NLGLA+ ++ ++E + K AI
Sbjct: 459 DRAIENYEKAKEVFVETLGETHPSTASIYDNLGLAYASNGDHDKAIEHYEKALAIALERL 518
Query: 265 ----PSMPEVLYQIASLYEITGDVEQASDVNENLLLEAVRNDALSQLH 308
P+ + + + ++ GD ++A + E L A+R + L H
Sbjct: 519 GEKHPTTAQSYGNLGNAFDSKGDHDKAIEYLEKAL--AIRVETLGDKH 564
>gi|379021405|ref|YP_005298067.1| Tetratricopeptide repeat (TPR) family protein [Staphylococcus
aureus subsp. aureus M013]
gi|386729320|ref|YP_006195703.1| O-linked GlcNAc transferase [Staphylococcus aureus subsp. aureus
71193]
gi|387602959|ref|YP_005734480.1| TPR domain protein [Staphylococcus aureus subsp. aureus ST398]
gi|418309978|ref|ZP_12921528.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21331]
gi|418950225|ref|ZP_13502417.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|418978343|ref|ZP_13526144.1| O-linked GlcNAc transferase [Staphylococcus aureus subsp. aureus
DR10]
gi|283470897|emb|CAQ50108.1| TPR domain protein [Staphylococcus aureus subsp. aureus ST398]
gi|359830714|gb|AEV78692.1| Tetratricopeptide repeat (TPR) family protein [Staphylococcus
aureus subsp. aureus M013]
gi|365237435|gb|EHM78281.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21331]
gi|375377463|gb|EHS80930.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|379993959|gb|EIA15404.1| O-linked GlcNAc transferase [Staphylococcus aureus subsp. aureus
DR10]
gi|384230613|gb|AFH69860.1| O-linked GlcNAc transferase [Staphylococcus aureus subsp. aureus
71193]
Length = 222
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|118349087|ref|XP_001033420.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287769|gb|EAR85757.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 537
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N V + MN +A+ + E+ A N+ IY + ++E+A++ ++ +
Sbjct: 65 NLGVIYQHMNMQEEALQCFLNSLEINPQDYQALMNIGNIYSEKNQLEEAKQWMIKSLNIN 124
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDA---------TC------------IE 235
N +NLG + + Y + ++ Y+ ALD DA C IE
Sbjct: 125 PKNKDCHLNLGTIYIQMKKYKEAEQSYLRALDLDAQDFLVNYKLGCLYSEVLLINPSDIE 184
Query: 236 ALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQAS------- 288
A +NLG + +N + + + + K+ I P + ++ +LY +E A
Sbjct: 185 AYFNLGQFYSQMNMFKEEKQSYLKILQIDPKYFQAYEKLGNLYFNMNMLEDAKQNYLKSI 244
Query: 289 DVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIED 332
D+N + + N ++ M EA++C L++ + I P D
Sbjct: 245 DLNPQSAI-SYFNLGITYQSMSMLEEAKQCYLSTLQ-INPQFSD 286
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+ Q + ++ A+ ++S A LG + + K K+ Y+ L + + N
Sbjct: 6 GDFSQKIEDQKQLIKANPFDSQAHFQLGLYYLLSQRLEKAKQSYIEGLKINPRFSQGHNN 65
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LG+ ++H+N ++L+CF I P + L I ++Y +E+A
Sbjct: 66 LGVIYQHMNMQEEALQCFLNSLEINPQDYQALMNIGNIYSEKNQLEEA 113
>gi|392558435|gb|EIW51623.1| TPR-like protein, partial [Trametes versicolor FP-101664 SS1]
Length = 191
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G + D KELY ++D T +L+NLG+ H HL EY D++ + + A+ P+
Sbjct: 28 GTQKLEEGDVQAAKELYKRSVDIKRTA-SSLFNLGVTHYHLKEYDDAITAWKEAIALQPT 86
Query: 267 MPEVLYQIASLYEITG 282
+ +AS Y ++
Sbjct: 87 SADAHTNLASAYIVSA 102
>gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 863
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 43/203 (21%)
Query: 138 EINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQA------------ 185
E+++A+ F ++ V+ L T+ N+ +Y+ +G+ ++A
Sbjct: 412 ELDRAIAFYEQA-LAIMVEALGEKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALAVRV 470
Query: 186 EKMAEE-ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY------ 238
E + E+ TA TYN NLG + DY K LY AL A +EAL
Sbjct: 471 ETLGEKHPSTAQTYN-----NLGGAYHDKGDYDKAIALYEKAL---AITVEALGEKHPST 522
Query: 239 -----NLGLAHKHLNEYSDSLECFHKLQAIV--------PSMPEVLYQIASLYEITGDVE 285
NLG A+ EY ++ C+ K AI PS + + + Y G
Sbjct: 523 ATSYNNLGGAYARKGEYDKAIACYEKALAIYAETLGEKHPSTADTYNNLGAAYVDKGQYG 582
Query: 286 QASDVNENLLLEAVRNDALSQLH 308
+A E L A++ + L + H
Sbjct: 583 KAIHHYEQAL--AIKVETLGEKH 603
>gi|78061915|ref|YP_371823.1| TPR repeat-containing protein [Burkholderia sp. 383]
gi|77969800|gb|ABB11179.1| TPR repeat protein [Burkholderia sp. 383]
Length = 740
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
A N G+ A + + + Y AL D E+ +N GL + L +D+L+CF +
Sbjct: 161 ALCNRGSALRALSRFDEALDTYDRALMVDPRSFESWFNRGLVLRELQRPADALQCFERAN 220
Query: 262 AIVPSMPEVLYQIA-SLYEITGDVEQASDVNENLLLEAVRNDAL 304
AI P M ++ + +L ++ E NE + + R D L
Sbjct: 221 AIRPGMAAIMAERGRTLIDLDRPGEALDAFNEAIAADPARIDVL 264
>gi|444322634|ref|XP_004181958.1| hypothetical protein TBLA_0H01520 [Tetrapisispora blattae CBS 6284]
gi|387515004|emb|CCH62439.1| hypothetical protein TBLA_0H01520 [Tetrapisispora blattae CBS 6284]
Length = 689
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 154 AVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAR 213
A D + +E ++ A T+L+ +Y + +A ++ E A D S + LG+C +
Sbjct: 186 AYDTTLNYNEYSTKALTSLASLYRARDMFHKASQLYERALAIDPSLSDIWATLGHCYLML 245
Query: 214 EDYVKGKELYVHALDN--DATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMP--- 268
+D K Y AL+N D + + +G+ + + E F K+ + P+
Sbjct: 246 DDLQKAYNAYQQALNNLSDPNVPKLWHGIGILYDRYGSLDFAEEAFKKVLDLDPNFEKAN 305
Query: 269 EVLYQIASLYEITGDVEQA 287
E+ +++ +Y+ G +A
Sbjct: 306 EIYFRLGIIYKHKGRWNEA 324
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D +S + LG MA++D+ E A++ D+ ++G+ + + + D+L+
Sbjct: 410 DPTDSTTWYYLGRIHMAKKDFTAAYESLQQAVNRDSRNPIFWCSIGVLYYQIGQNHDALD 469
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGD 283
+ + + P + EV Y + +LYE D
Sbjct: 470 AYTRAIRLNPYISEVWYNLGTLYETCND 497
>gi|319900977|ref|YP_004160705.1| hypothetical protein Bache_1109 [Bacteroides helcogenes P 36-108]
gi|319416008|gb|ADV43119.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
helcogenes P 36-108]
Length = 477
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 7/192 (3%)
Query: 139 INKAVTFLRMNDVSQAVDV---LKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
I+K ++ N + +V LK ++ T +S Y G+ +AE E A A
Sbjct: 31 IDKVKGLIKTNPGQASEEVGELLKGKNKKNVELITAVSRAYLDTGKPAEAETYLEMARKA 90
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D V G+ A+ R+D K +LY A+ D C EA A+K L S +++
Sbjct: 91 DNKAPEVSVLEGDIALYRKDVGKACQLYEQAIYFDPNCKEAYLKYAQAYK-LASPSQAID 149
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL--LEAVRNDALS-QLHREMK 312
+L+ P PE +A +Y +A + N + A+ ND L +
Sbjct: 150 KLQQLKTFAPDYPEADKALAEVYYANNRFGEAVEAYANFIDTPVAMENDILKYAFALFLN 209
Query: 313 HEAEKCILTSAK 324
H+ EK + + K
Sbjct: 210 HDFEKSLQVARK 221
>gi|300868209|ref|ZP_07112841.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
gi|300333833|emb|CBN58025.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
Length = 1545
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
IY QG+VE+A E+A + A LGN A+ + + Y A+
Sbjct: 20 IYLSQGKVEEAIAACEQALKVKPDFAQALKTLGNALQAQGRVEEARHWYAKAIQIQPNFA 79
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
EA NLG + ++S+++ + K A+ P+ V +A + G QA D
Sbjct: 80 EAYANLGSIYAAEQKWSEAITHYQKAIALKPNFAGVYRNLAKVLAQMGKDAQAQD 134
>gi|254483181|ref|ZP_05096414.1| tetratricopeptide repeat domain protein [marine gamma
proteobacterium HTCC2148]
gi|214036552|gb|EEB77226.1| tetratricopeptide repeat domain protein [marine gamma
proteobacterium HTCC2148]
Length = 610
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 61/163 (37%), Gaps = 24/163 (14%)
Query: 108 PSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSS 167
P + +N +N Y Q+ R H A L N +D K
Sbjct: 76 PEVHNNLANSYKAIGQTERAEQHYRDAITLNPNY-------------LDAFK-------- 114
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
NL + G++ A + A T + LGN +E + + Y AL
Sbjct: 115 ---NLGLLLQSTGDLSNAITFLQRAVDLSTQKAPMLTALGNVYREQELFQQAVPCYQAAL 171
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEV 270
+ + + A++NLGL +K E + CF + AI P + E+
Sbjct: 172 QINPSYVNAIHNLGLCYKLTEELEQARICFERAAAIAPDVAEI 214
>gi|145219214|ref|YP_001129923.1| hypothetical protein Cvib_0399 [Chlorobium phaeovibrioides DSM 265]
gi|145205378|gb|ABP36421.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeovibrioides
DSM 265]
Length = 201
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 166 SSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVH 225
++A L Y Q ++AE+ + A D AA+ +LG + R+DY + +E +
Sbjct: 51 TAAMLRLGNAYAQQNRYDEAEETYKNALALDPELDAAYHSLGAVSFNRQDYPRAREWFSR 110
Query: 226 ALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVE 285
L+ LY+LG A + Y ++ + + S E Y +A + TG ++
Sbjct: 111 HLERSPKDSLRLYDLGNALMQMKAYDEAADAYSAAIDNSRSFTEAHYNLAVCFIKTGRMD 170
Query: 286 QASDVNENLL 295
+A + LL
Sbjct: 171 EARQIYNWLL 180
>gi|15229253|ref|NP_187074.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
gi|75336082|sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC; AltName:
Full=Protein SECRET AGENT
gi|6721161|gb|AAF26789.1|AC016829_13 putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|18139887|gb|AAL60196.1|AF441079_1 O-linked N-acetyl glucosamine transferase [Arabidopsis thaliana]
gi|20259324|gb|AAM13988.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|21436429|gb|AAM51415.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|110742062|dbj|BAE98963.1| O-linked GlcNAc transferase like protein [Arabidopsis thaliana]
gi|332640535|gb|AEE74056.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
Length = 977
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 14/220 (6%)
Query: 72 RKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC-VQSIRNSAH 130
R A A N A + + + EA +C + L P + D SN N Q + + A+
Sbjct: 151 RPNFADAWSNLASAYMRKGRLSEATQCCQQALSL-NPLLVDAHSNLGNLMKAQGLIHEAY 209
Query: 131 SSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFL 178
S + + I N A F+ D+++A+ K ++ + A NL +Y
Sbjct: 210 SCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKA 269
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G +A + A ++ AF N+ + + Y AL D +EA
Sbjct: 270 LGRPTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYN 329
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
NLG A K + +++ C+++ A+ P+ P+ + + ++Y
Sbjct: 330 NLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANLGNIY 369
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N A ++R +S+A + S + + A +NL + QG + +A EA
Sbjct: 160 NLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQ 219
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
+ A+ NL M D + + Y A+ +A NLG +K L ++++ C
Sbjct: 220 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC 279
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ + P+ IAS+Y G ++ A
Sbjct: 280 YQHALQMRPNSAMAFGNIASIYYEQGQLDLA 310
>gi|403272067|ref|XP_003927911.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Saimiri boliviensis boliviensis]
Length = 915
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
+ +E+A+++ +A + A+++ G + +K KE Y+ AL+ D + Y
Sbjct: 542 ESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWY 601
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
NL + L E +++L+ F++ + P L+ A L + +G+V+ + + LL
Sbjct: 602 NLAIVFIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLL 658
>gi|413958629|ref|ZP_11397868.1| hypothetical protein BURK_001840 [Burkholderia sp. SJ98]
gi|413941209|gb|EKS73169.1| hypothetical protein BURK_001840 [Burkholderia sp. SJ98]
Length = 619
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 49/123 (39%)
Query: 173 SFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDAT 232
F G + AE+ + A A+ ++ A LG + + + EL A+D T
Sbjct: 8 GFAAHRDGRLTDAERDYQAALAAEPHHVDALHYLGVLRHQQGQHAEAAELVRRAVDLRPT 67
Query: 233 CIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNE 292
NLG A K L D++E F + P P Y + + Y G E A+D E
Sbjct: 68 DAGLQLNLGNALKALGRLDDAIERFRNALTLAPGFPLAQYNLGNAYTAAGRHEDAADAFE 127
Query: 293 NLL 295
L
Sbjct: 128 KAL 130
>gi|417903108|ref|ZP_12546963.1| tetratricopeptide repeat protein, partial [Staphylococcus aureus
subsp. aureus 21269]
gi|341850282|gb|EGS91406.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21269]
Length = 209
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|384158735|ref|YP_005540808.1| hypothetical protein BAMTA208_05670 [Bacillus amyloliquefaciens
TA208]
gi|384164825|ref|YP_005546204.1| hypothetical protein LL3_02443 [Bacillus amyloliquefaciens LL3]
gi|384167797|ref|YP_005549175.1| hypothetical protein BAXH7_01185 [Bacillus amyloliquefaciens XH7]
gi|328552823|gb|AEB23315.1| hypothetical protein BAMTA208_05670 [Bacillus amyloliquefaciens
TA208]
gi|328912380|gb|AEB63976.1| hypothetical protein LL3_02443 [Bacillus amyloliquefaciens LL3]
gi|341827076|gb|AEK88327.1| hypothetical protein BAXH7_01185 [Bacillus amyloliquefaciens XH7]
Length = 423
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 158 LKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYV 217
LK D SS L+ + +G E A K A+E T D YN F+ G A+ +
Sbjct: 230 LKGLDPSYSSLYMPLAKSFEAEGMYEDALKTAKEGITYDEYNKELFLYAGKMALKLGNED 289
Query: 218 KGKELYVHALDNDATCIEALYNLGLAHKHLNE-YSDSLECFHKLQAIVPSMPEVLYQIAS 276
+GK+L AL D +EAL+ L LA H E + + ++ +++ P+ + +AS
Sbjct: 290 EGKKLLQEALALDPGYVEALHTL-LAVYHKEESFEEIIDLIQEVRGYGEEDPKYNWYLAS 348
Query: 277 LYEITGDVEQASDVNENL 294
Y TG +EQ ++ ++
Sbjct: 349 AY--TG-LEQYAEAKKSF 363
>gi|384550445|ref|YP_005739697.1| hypothetical protein SAA6159_01553 [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302333294|gb|ADL23487.1| tetratricopeptide domain-containing protein [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 222
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|75318847|sp|O82422.1|SPY_HORVU RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; AltName:
Full=HvSPY
gi|3617837|gb|AAC36055.1| gibberellin action negative regulator SPY [Hordeum vulgare subsp.
vulgare]
gi|326515544|dbj|BAK07018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 944
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A T+L ++G++ Q ++A + + + A NLG ++ Y AL
Sbjct: 254 ALTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEMLNFEMAIVFYELAL 313
Query: 228 DNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ C EA NLG+ +K + ++EC+ +I P+ + L + +Y + G ++ A
Sbjct: 314 HFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 373
Query: 288 SDVNENLLL 296
+ + E +L
Sbjct: 374 ASMIEKAIL 382
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Query: 139 INKAVTFLRMNDVSQAVDVLK---SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTA 195
I K + + QA+D D + A T+ IY +G + +A + ++A +A
Sbjct: 72 IGKGICLQAQSLPRQALDCFTEAVKVDPKNACALTHCGMIYKDEGHLVEAAEAYQKARSA 131
Query: 196 DTYNSAA-------FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLN 248
D AA +LG + G + Y AL+ D+ A YNLG+ + +
Sbjct: 132 DPSYKAASEFLAIVLTDLGTSLKLAGNTEDGIQKYCEALEVDSHYAPAYYNLGVVYSEMM 191
Query: 249 EYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL-----LEAVRND- 302
++ +L C+ K P E + +Y+ G+++ A + L E +N+
Sbjct: 192 QFDVALTCYEKAALERPLYAEAYCNMGVIYKNRGELDAAIACYDRCLTISPNFEIAKNNM 251
Query: 303 --ALSQLHREMKHEAE 316
AL+ L ++K E +
Sbjct: 252 AIALTDLGTKVKIEGD 267
>gi|440752107|ref|ZP_20931310.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176600|gb|ELP55873.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 1254
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 18/235 (7%)
Query: 178 LQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
L GE+E A+ +A D + ++ NLG A + + Y A+++ A
Sbjct: 993 LTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAF 1052
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLE 297
YNLGL ++ L E ++ C+ + + EV +A LY+ + +A LL
Sbjct: 1053 YNLGLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLL 1112
Query: 298 AVRNDALSQLHREMKHEAE---KCILTSAKLIAPSIEDNFSN---GYNWCVQSIRNSAHS 351
N L + +E E K + K+I +D + G ++ Q + A S
Sbjct: 1113 QPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKS 1172
Query: 352 SLAQDLEI---------NKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSF 394
+ +E+ N V + D +AVD + CD A T L F
Sbjct: 1173 CFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDCFRQSLRCDPANKLAHTALLF 1227
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 153 QAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMA 212
QA+ V D + + NL F+ QG++E+A ++A + +AF NLG
Sbjct: 1006 QAIKV----DPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLGLVYEQ 1061
Query: 213 REDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY 272
++ K Y H++ D+T +E +L + Y+ + + + + P E+ Y
Sbjct: 1062 LKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRY 1121
Query: 273 QIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAK 324
+ + ++A + +++A DA++ LH + ++ +K +LT AK
Sbjct: 1122 NLGVVLYEQEKFDKAVSCFQK-IIQAKPQDAIAYLHLGISYKQQK-LLTKAK 1171
>gi|428184992|gb|EKX53846.1| hypothetical protein GUITHDRAFT_160947 [Guillardia theta CCMP2712]
Length = 1178
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Query: 149 NDVSQAVDVLKSC---DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVN 205
+D S+A+ K D N+ +Y L G +E+AE + + A N
Sbjct: 384 SDASEAMACFKKAAEADRRRPEPWLNVGELYKLAGRLEEAEVALRKCVSLGPTWPLAHFN 443
Query: 206 LGNCAMAREDYVKGKELYVHALDNDATCIEALYN-LGLAHKHLNEYSDSLECFHKLQAIV 264
L N + + Y AL+ D A++N + L H LN+ + + K I
Sbjct: 444 LANVLKDLDRNEESLAAYQEALELDPPFKAAIFNNMALVHGTLNQNDLVIASYEKAMRID 503
Query: 265 PSMPEVLYQIASLYEITGDVEQA 287
P +PE +AS Y+ GD+ A
Sbjct: 504 PRVPETHNNLASYYQAVGDMTNA 526
>gi|49483865|ref|YP_041089.1| hypothetical protein SAR1699 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49241994|emb|CAG40691.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 222
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQESIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|421117281|ref|ZP_15577644.1| stage II sporulation protein E [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410010992|gb|EKO69120.1| stage II sporulation protein E [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 1061
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+V+QA ++ + T DT N LG + +DY E+ + L D E +
Sbjct: 925 GKVDQALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFY 984
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L +A+K + +Y +L+ KL I P L ++ +Y + + A +V L+
Sbjct: 985 LSIANKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEVARKLI 1040
>gi|21283299|ref|NP_646387.1| hypothetical protein MW1570 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486453|ref|YP_043674.1| hypothetical protein SAS1556 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253732275|ref|ZP_04866440.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|297207660|ref|ZP_06924095.1| TPR domain protein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300911742|ref|ZP_07129185.1| TPR domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|418316703|ref|ZP_12928138.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21340]
gi|418934589|ref|ZP_13488411.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418988685|ref|ZP_13536357.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|448740347|ref|ZP_21722326.1| TPR domain-containing protein [Staphylococcus aureus KT/314250]
gi|21204739|dbj|BAB95435.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244896|emb|CAG43357.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253724064|gb|EES92793.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|296887677|gb|EFH26575.1| TPR domain protein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300885988|gb|EFK81190.1| TPR domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|365240666|gb|EHM81433.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21340]
gi|377717778|gb|EHT41953.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377770683|gb|EHT94444.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|445548831|gb|ELY17078.1| TPR domain-containing protein [Staphylococcus aureus KT/314250]
Length = 222
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|282908940|ref|ZP_06316758.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282327204|gb|EFB57499.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
WW2703/97]
Length = 146
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQESIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|33865807|ref|NP_897366.1| TPR domain containing protein [Synechococcus sp. WH 8102]
gi|33632977|emb|CAE07788.1| possible-TPR Domain containing protein [Synechococcus sp. WH 8102]
Length = 781
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G +++AE +E + + F NLG + Y +A+ D +A N
Sbjct: 37 GNLKKAEMAYKEIINSGLQSPIIFSNLGAICQTNGRTEEAIAFYKNAIKIDQRHHDAFSN 96
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
LG +K L +Y+ +L+ K + P P L + S+Y+ G ++QA
Sbjct: 97 LGALYKDLGQYNQALDATVKSLKLKPDNPIALLNLGSIYKDLGKLDQA 144
>gi|50286091|ref|XP_445474.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524779|emb|CAG58385.1| unnamed protein product [Candida glabrata]
Length = 1148
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 44/85 (51%)
Query: 196 DTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLE 255
D ++ + +LG M R DY + + A++ D+ ++G+ + +++Y D+L+
Sbjct: 294 DPSDATTWYHLGRVHMIRSDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALD 353
Query: 256 CFHKLQAIVPSMPEVLYQIASLYEI 280
+ + + P + EV Y + +LYE
Sbjct: 354 AYTRAIRLNPYISEVWYDLGTLYET 378
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G+ A E + K EL H E + LG+ +KH ++S +LECF + A P+
Sbjct: 166 GSLDYAEEAFAKVLELDPHF----EKANEIYFRLGIIYKHQGKWSQALECFRYILAQPPT 221
Query: 267 MP----EVLYQIASLYEITGDVEQASDVNENLLLE 297
P ++ +Q+ S+ E G+ + A + E++LL+
Sbjct: 222 -PLQEWDIWFQLGSVLESMGEWQGAREAYEHVLLQ 255
>gi|417770253|ref|ZP_12418163.1| stage II sporulation protein E [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418684148|ref|ZP_13245337.1| stage II sporulation protein E [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400324111|gb|EJO76411.1| stage II sporulation protein E [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409947807|gb|EKN97801.1| stage II sporulation protein E [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455666232|gb|EMF31680.1| stage II sporulation protein E [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 1061
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+V+QA ++ + T DT N LG + +DY E+ + L D E +
Sbjct: 925 GKVDQALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFY 984
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L +A+K + +Y +L+ KL I P L ++ +Y + + A +V L+
Sbjct: 985 LSIANKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEVARKLI 1040
>gi|418559004|ref|ZP_13123551.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21252]
gi|418994345|ref|ZP_13541980.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|371976354|gb|EHO93644.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21252]
gi|377744142|gb|EHT68120.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG290]
Length = 222
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQESIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus glucosetrophus
SIP3-4]
gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
SIP3-4]
Length = 927
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 151 VSQAVD-VLKSC--DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
+SQA++ LKS ++ A +NL Y + E+A + A D S A+ NLG
Sbjct: 463 ISQAIECYLKSIAIKPDSARAYSNLGNSYSSLKDYEKAIDAYKTAIRLDPQYSDAYYNLG 522
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
M + + Y L+ + ++A+ NLG+AH LNE+ + E F K+
Sbjct: 523 TAQMEIKQFRDAIYSYKQVLEIEPDSVKAMNNLGVAHTALNEFKQAEEIFSKV 575
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 3/153 (1%)
Query: 140 NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTAD 196
N +T +V A+ +LK + + A +L+ Y + G E+A E A
Sbjct: 350 NLGITLCATLEVEAAIPLLKQSLAIYADNLIAHVHLAETYAVLGRFEEAAPHYEYALKLS 409
Query: 197 TYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
N L N + + KE + AL+ D +AL NLG H + S ++EC
Sbjct: 410 EKNPQLINALANIYVKTGQHDLAKEYFERALEIDPRFTDALNNLGNLHHSHDRISQAIEC 469
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQASD 289
+ K AI P + + Y D E+A D
Sbjct: 470 YLKSIAIKPDSARAYSNLGNSYSSLKDYEKAID 502
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 59/129 (45%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D + A NL ++ + QA + ++ ++ A+ NLGN + +DY K +
Sbjct: 443 DPRFTDALNNLGNLHHSHDRISQAIECYLKSIAIKPDSARAYSNLGNSYSSLKDYEKAID 502
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEIT 281
Y A+ D +A YNLG A + ++ D++ + ++ I P + + + +
Sbjct: 503 AYKTAIRLDPQYSDAYYNLGTAQMEIKQFRDAIYSYKQVLEIEPDSVKAMNNLGVAHTAL 562
Query: 282 GDVEQASDV 290
+ +QA ++
Sbjct: 563 NEFKQAEEI 571
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 136 DLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIYFLQGEVEQAEKMAEEA 192
D NKA+ ++N + A+ + K+ E+ A+ NL I+ + + E+A E A
Sbjct: 210 DAYCNKAIALGKLNKLEDAILMYKAAIELVPDEASIYNNLGNIFSRKRQFEEALSCFENA 269
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
A N GN + E + Y AL+ EA +LG+A+ L+ Y++
Sbjct: 270 IRLQPTYLKAHCNAGNALIDLERVEEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYNE 329
Query: 253 SLECFHKLQAIVPSMPEVL 271
++ + + A++P+ E +
Sbjct: 330 AIASYQRAIALMPNYAEAI 348
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 26/239 (10%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G + +A+ + N A LG M DY + + AL+ + +A YN
Sbjct: 19 GNLMEAQNYYSQVLEESPENPDALHLLGVTYMQSRDYARCIPVIQKALEYNPRHADAHYN 78
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLEAV 299
LG+A + +Y ++ + + A+ P E Y + + G +E A+ + EA+
Sbjct: 79 LGIAFGAVRQYPQAIASYMQAIALKPDRAEAYYNLGVSHAALGQLEPATASYK----EAI 134
Query: 300 R-NDALSQLHREM--------KH-EAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSA 349
R N A + +R + KH EA + K E + N+ Q + A
Sbjct: 135 RLNPAYIKAYRNLGVVLEAQGKHTEATAAYQSLLKFRPDDAEAHHQLAINFSTQKKFDEA 194
Query: 350 HSSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKSCDEMTSSAAT---NLSFIY 396
++ +EI NKA+ ++N + A+ + K+ E+ A+ NL I+
Sbjct: 195 IIHYSRAIEINPEFVDAYCNKAIALGKLNKLEDAILMYKAAIELVPDEASIYNNLGNIF 253
>gi|15924610|ref|NP_372144.1| hypothetical protein SAV1620 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927200|ref|NP_374733.1| hypothetical protein SA1448 [Staphylococcus aureus subsp. aureus
N315]
gi|82751220|ref|YP_416961.1| hypothetical protein SAB1491c [Staphylococcus aureus RF122]
gi|148268101|ref|YP_001247044.1| hypothetical protein SaurJH9_1677 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394169|ref|YP_001316844.1| hypothetical protein SaurJH1_1711 [Staphylococcus aureus subsp.
aureus JH1]
gi|156979938|ref|YP_001442197.1| hypothetical protein SAHV_1607 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253316603|ref|ZP_04839816.1| hypothetical protein SauraC_10740 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253733129|ref|ZP_04867294.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|255006405|ref|ZP_05145006.2| hypothetical protein SauraM_08050 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793695|ref|ZP_05642674.1| TPR repeat-containing protein [Staphylococcus aureus A9781]
gi|258411006|ref|ZP_05681286.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258420192|ref|ZP_05683147.1| TPR repeat-containing protein [Staphylococcus aureus A9719]
gi|258438194|ref|ZP_05689478.1| TPR repeat-containing protein [Staphylococcus aureus A9299]
gi|258443657|ref|ZP_05691996.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258446864|ref|ZP_05695018.1| TPR repeat-containing protein [Staphylococcus aureus A6300]
gi|258448778|ref|ZP_05696890.1| TPR repeat-containing protein [Staphylococcus aureus A6224]
gi|258453597|ref|ZP_05701575.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|269203246|ref|YP_003282515.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282893123|ref|ZP_06301357.1| hypothetical protein SGAG_00477 [Staphylococcus aureus A8117]
gi|282916889|ref|ZP_06324647.1| hypothetical protein SATG_00382 [Staphylococcus aureus subsp.
aureus D139]
gi|282928254|ref|ZP_06335859.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|283770694|ref|ZP_06343586.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
H19]
gi|295406742|ref|ZP_06816547.1| hypothetical protein SMAG_01914 [Staphylococcus aureus A8819]
gi|296276719|ref|ZP_06859226.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
MR1]
gi|297245676|ref|ZP_06929541.1| hypothetical protein SLAG_01769 [Staphylococcus aureus A8796]
gi|384864840|ref|YP_005750199.1| hypothetical protein ECTR2_1469 [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|385781904|ref|YP_005758075.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|386831228|ref|YP_006237882.1| hypothetical protein SAEMRSA15_15380 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387150763|ref|YP_005742327.1| Tetratricopeptide repeat (TPR) family protein [Staphylococcus
aureus 04-02981]
gi|387780709|ref|YP_005755507.1| hypothetical protein SARLGA251_15230 [Staphylococcus aureus subsp.
aureus LGA251]
gi|415692741|ref|ZP_11454661.1| hypothetical protein CGSSa03_02418 [Staphylococcus aureus subsp.
aureus CGS03]
gi|416841959|ref|ZP_11904714.1| TPR domain-containing protein [Staphylococcus aureus O11]
gi|416846570|ref|ZP_11906619.1| TPR domain-containing protein [Staphylococcus aureus O46]
gi|417651163|ref|ZP_12300926.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21172]
gi|417653485|ref|ZP_12303216.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21193]
gi|417797408|ref|ZP_12444604.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21305]
gi|417799934|ref|ZP_12447066.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21310]
gi|417803331|ref|ZP_12450373.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21318]
gi|417894339|ref|ZP_12538358.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21201]
gi|417897880|ref|ZP_12541806.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21259]
gi|418424807|ref|ZP_12997920.1| hypothetical protein MQA_00827 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418427762|ref|ZP_13000767.1| hypothetical protein MQC_00571 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418433899|ref|ZP_13006340.1| hypothetical protein MQG_02062 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418437243|ref|ZP_13009039.1| hypothetical protein MQI_01327 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418440143|ref|ZP_13011843.1| hypothetical protein MQK_01940 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418443161|ref|ZP_13014760.1| hypothetical protein MQM_01274 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418446225|ref|ZP_13017698.1| hypothetical protein MQO_02010 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418449239|ref|ZP_13020623.1| hypothetical protein MQQ_02020 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418452049|ref|ZP_13023383.1| hypothetical protein MQS_00527 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418455044|ref|ZP_13026303.1| hypothetical protein MQU_01159 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457922|ref|ZP_13029121.1| hypothetical protein MQW_01439 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418562653|ref|ZP_13127110.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21262]
gi|418566950|ref|ZP_13131315.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21272]
gi|418574500|ref|ZP_13138669.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21333]
gi|418640279|ref|ZP_13202511.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|418645171|ref|ZP_13207299.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-55]
gi|418652902|ref|ZP_13214865.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|418656157|ref|ZP_13217976.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|418661098|ref|ZP_13222700.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878537|ref|ZP_13432772.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418881303|ref|ZP_13435520.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418884152|ref|ZP_13438345.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886886|ref|ZP_13441033.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418895383|ref|ZP_13449478.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418914722|ref|ZP_13468692.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418919577|ref|ZP_13473522.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418931925|ref|ZP_13485760.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418991549|ref|ZP_13539210.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|419784714|ref|ZP_14310477.1| anaphase-promoting complex, cyclosome, subunit 3 [Staphylococcus
aureus subsp. aureus IS-M]
gi|421148501|ref|ZP_15608161.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|424775002|ref|ZP_18202001.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus CM05]
gi|443636034|ref|ZP_21120152.1| putative tetratricopeptide repeat protein YrrB [Staphylococcus
aureus subsp. aureus 21236]
gi|443639884|ref|ZP_21123884.1| putative tetratricopeptide repeat protein YrrB [Staphylococcus
aureus subsp. aureus 21196]
gi|448743295|ref|ZP_21725205.1| Tetratricopeptide repeat (TPR) family protein [Staphylococcus
aureus KT/Y21]
gi|13701418|dbj|BAB42712.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247391|dbj|BAB57782.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|82656751|emb|CAI81180.1| conserved hypothetical protein [Staphylococcus aureus RF122]
gi|147741170|gb|ABQ49468.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149946621|gb|ABR52557.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156722073|dbj|BAF78490.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|253728885|gb|EES97614.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|257787667|gb|EEV26007.1| TPR repeat-containing protein [Staphylococcus aureus A9781]
gi|257840156|gb|EEV64620.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257843903|gb|EEV68297.1| TPR repeat-containing protein [Staphylococcus aureus A9719]
gi|257848238|gb|EEV72229.1| TPR repeat-containing protein [Staphylococcus aureus A9299]
gi|257851063|gb|EEV75006.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257854439|gb|EEV77388.1| TPR repeat-containing protein [Staphylococcus aureus A6300]
gi|257858056|gb|EEV80945.1| TPR repeat-containing protein [Staphylococcus aureus A6224]
gi|257864328|gb|EEV87078.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262075536|gb|ACY11509.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282319376|gb|EFB49728.1| hypothetical protein SATG_00382 [Staphylococcus aureus subsp.
aureus D139]
gi|282590061|gb|EFB95143.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282764441|gb|EFC04567.1| hypothetical protein SGAG_00477 [Staphylococcus aureus A8117]
gi|283460841|gb|EFC07931.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
H19]
gi|285817302|gb|ADC37789.1| Tetratricopeptide repeat (TPR) family protein [Staphylococcus
aureus 04-02981]
gi|294968489|gb|EFG44513.1| hypothetical protein SMAG_01914 [Staphylococcus aureus A8819]
gi|297177327|gb|EFH36579.1| hypothetical protein SLAG_01769 [Staphylococcus aureus A8796]
gi|312830007|emb|CBX34849.1| tetratricopeptide repeat family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315129901|gb|EFT85891.1| hypothetical protein CGSSa03_02418 [Staphylococcus aureus subsp.
aureus CGS03]
gi|323439033|gb|EGA96765.1| TPR domain-containing protein [Staphylococcus aureus O11]
gi|323442824|gb|EGB00449.1| TPR domain-containing protein [Staphylococcus aureus O46]
gi|329727347|gb|EGG63803.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21172]
gi|329733176|gb|EGG69513.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21193]
gi|334266900|gb|EGL85370.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21305]
gi|334272466|gb|EGL90831.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21310]
gi|334272545|gb|EGL90909.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21318]
gi|341849382|gb|EGS90525.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21259]
gi|341852484|gb|EGS93373.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21201]
gi|344177811|emb|CCC88290.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|364522893|gb|AEW65643.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|371973757|gb|EHO91105.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21262]
gi|371979227|gb|EHO96462.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21333]
gi|371982654|gb|EHO99802.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21272]
gi|375014843|gb|EHS08514.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|375021070|gb|EHS14577.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|375024004|gb|EHS17449.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-55]
gi|375034341|gb|EHS27507.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|375039529|gb|EHS32454.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|377694659|gb|EHT19024.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377695189|gb|EHT19553.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377713103|gb|EHT37316.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377714487|gb|EHT38688.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377723671|gb|EHT47796.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377724388|gb|EHT48504.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377731046|gb|EHT55104.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377755378|gb|EHT79277.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377767256|gb|EHT91063.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|383363924|gb|EID41250.1| anaphase-promoting complex, cyclosome, subunit 3 [Staphylococcus
aureus subsp. aureus IS-M]
gi|385196620|emb|CCG16249.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387718050|gb|EIK06045.1| hypothetical protein MQC_00571 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387719257|gb|EIK07208.1| hypothetical protein MQA_00827 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387724794|gb|EIK12433.1| hypothetical protein MQG_02062 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387727231|gb|EIK14763.1| hypothetical protein MQI_01327 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387729857|gb|EIK17270.1| hypothetical protein MQK_01940 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387735157|gb|EIK22294.1| hypothetical protein MQO_02010 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387736449|gb|EIK23543.1| hypothetical protein MQQ_02020 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387736837|gb|EIK23925.1| hypothetical protein MQM_01274 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387744930|gb|EIK31694.1| hypothetical protein MQS_00527 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745097|gb|EIK31859.1| hypothetical protein MQU_01159 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746690|gb|EIK33419.1| hypothetical protein MQW_01439 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394331644|gb|EJE57727.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|402346860|gb|EJU81930.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus CM05]
gi|408423726|emb|CCJ11137.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425716|emb|CCJ13103.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427703|emb|CCJ15066.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429692|emb|CCJ26857.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431679|emb|CCJ18994.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433673|emb|CCJ20958.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435665|emb|CCJ22925.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437649|emb|CCJ24892.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|443406159|gb|ELS64743.1| putative tetratricopeptide repeat protein YrrB [Staphylococcus
aureus subsp. aureus 21196]
gi|443408543|gb|ELS67062.1| putative tetratricopeptide repeat protein YrrB [Staphylococcus
aureus subsp. aureus 21236]
gi|445563424|gb|ELY19585.1| Tetratricopeptide repeat (TPR) family protein [Staphylococcus
aureus KT/Y21]
Length = 222
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|417644393|ref|ZP_12294386.1| tetratricopeptide repeat protein, partial [Staphylococcus warneri
VCU121]
gi|330684843|gb|EGG96533.1| tetratricopeptide repeat protein [Staphylococcus epidermidis
VCU121]
Length = 221
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 42/74 (56%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E++E+ ++A T D N A + NLGN ++ + + +LY A+ + ++ Y +
Sbjct: 48 EIEKSERFFQKAITIDPENGAIYYNLGNVYYNQDRFKEAIKLYQQAMKYNIEPVDCNYMI 107
Query: 241 GLAHKHLNEYSDSL 254
G++ LN + ++L
Sbjct: 108 GMSFNQLNAHKEAL 121
>gi|91093513|ref|XP_969441.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Tribolium
castaneum]
gi|270002675|gb|EEZ99122.1| hypothetical protein TcasGA2_TC005228 [Tribolium castaneum]
Length = 1187
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 145 FLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAE------KMAEEACTADTY 198
F+++N+ +A + ++ L + L+ ++Q E +M +A T D+
Sbjct: 207 FMKLNNQEKARLAFERALQLDPQCVGALVGLAILKLNLQQPESIRSGVQMLSKAYTIDSS 266
Query: 199 NSAAFVNLGNCAMAREDYVKGKELYVHAL---DNDATCIEALYNLGLAHKHLNEYSDSLE 255
N +L N ++DY K + L +HA +N+A E+ Y L A +Y + +
Sbjct: 267 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQ 326
Query: 256 CFHKLQAIVPS---MPEVLYQIASLYEITGDVEQASDVNENLL 295
+++ P+ +P + + +Y GD E A+ E +L
Sbjct: 327 YYYQATQFAPTAFVLPH--FGLGQMYIYRGDAENAAQCFEKVL 367
>gi|84490111|ref|YP_448343.1| hypothetical protein Msp_1323 [Methanosphaera stadtmanae DSM 3091]
gi|84373430|gb|ABC57700.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
Length = 377
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 50/267 (18%)
Query: 16 IGLIDESCICARNQDFKAALE----KAKLASNKERVLIKLQEQFGHADSHN---IELTFS 68
+G +S IC +KAALE KL + L +L QFG A +H I+L
Sbjct: 136 MGKYKQSSIC-----YKAALEYDHDDVKLLNRIGDTLSRLG-QFGDAINHYKKAIKL--- 186
Query: 69 NINRKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNS 128
N N A++ L+ KH+ EK + S K A SI N +N V R
Sbjct: 187 ---EPDNEYLYNNIAIAYLN---KHDLEKALKMSDK--ALSI-----NMHNTTVLYWR-- 231
Query: 129 AHSSLAQDLEINKAVTFLRMNDVSQAV---DVLKSCDEMTSSAATNLSFIYFLQGEVEQA 185
+ + +ND A+ D++ D+ + + + + G+ E+A
Sbjct: 232 -------------GLIYEMLNDFENALNSFDMVIEIDDTDADVWNERATVLNMLGKSEEA 278
Query: 186 ---EKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGL 242
+ E C + +S + + GN + + Y + E Y +AL + L N G+
Sbjct: 279 LYSYDKSLELCLDNDKDSNTWASKGNTLLGLQRYEEAIECYNNALKLNENNPIVLNNKGV 338
Query: 243 AHKHLNEYSDSLECFHKLQAIVPSMPE 269
A+ L++++++++CF K+ I P P+
Sbjct: 339 AYMELDDFNNAIKCFRKVLVIYPDNPD 365
>gi|418670189|ref|ZP_13231563.1| stage II sporulation protein E [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418699915|ref|ZP_13260864.1| stage II sporulation protein E [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418705455|ref|ZP_13266320.1| stage II sporulation protein E [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418713467|ref|ZP_13274194.1| stage II sporulation protein E [Leptospira interrogans str. UI 08452]
gi|418730991|ref|ZP_13289467.1| stage II sporulation protein E [Leptospira interrogans str. UI 12758]
gi|410754479|gb|EKR16134.1| stage II sporulation protein E [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410761036|gb|EKR27225.1| stage II sporulation protein E [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410765306|gb|EKR36008.1| stage II sporulation protein E [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410774553|gb|EKR54561.1| stage II sporulation protein E [Leptospira interrogans str. UI 12758]
gi|410790550|gb|EKR84244.1| stage II sporulation protein E [Leptospira interrogans str. UI 08452]
Length = 1061
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+V+QA ++ + T DT N LG + +DY E+ + L D E +
Sbjct: 925 GKVDQALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFY 984
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L +A+K + +Y +L+ KL I P L ++ +Y + + A +V L+
Sbjct: 985 LSIANKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEVARKLI 1040
>gi|359690312|ref|ZP_09260313.1| TPR-repeat-containing protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 690
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 145 FLRMNDVSQAVDVLKSCDEMTSSA-----ATNLSFIYFLQGEVEQAEKMAEEACT-ADTY 198
F +ND A+D K ++SS NL+ YF +GE+ QAE+ + A
Sbjct: 217 FNEINDPDAAIDAYKQG--LSSSPDDPYLTYNLALSYFKKGEIPQAEEHFKLVVMRARGG 274
Query: 199 NSAAFVN--LGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLEC 256
AA N LGN + R DYV + + A +ALYNL + K + +S++
Sbjct: 275 KLAALSNSYLGNISYNRGDYVSAEHYFREAATLTPNDAKALYNLSIVLKKNGKLEESVKY 334
Query: 257 FHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
+ PE+ IA +E EQ+
Sbjct: 335 LELANQAGSNDPELFRSIAEGFEQLNQGEQS 365
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 129 AHSSLAQDLEINKAVT--FLRMNDVSQAVDVLKSCDEMTSSAATNLSFI------YFLQG 180
A+ + + D E+ +++ F ++N Q+++ L+ + + NL + Y+ +G
Sbjct: 338 ANQAGSNDPELFRSIAEGFEQLNQGEQSINALQKGLKYNPN---NLDLLFQLAETYYNKG 394
Query: 181 EVEQAEKMAE---EACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
++ AE+ ++ D++ A +NLG E Y + LD + +A
Sbjct: 395 DLLAAEETYRRIVDSTPGDSFTETALLNLGVVLDQMERYGEAITYLNRVLDLNPKNAKAY 454
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVP 265
YNLGL +KH + ++E F K + P
Sbjct: 455 YNLGLVYKHTGNGTQAIENFRKASYLDP 482
>gi|324505676|gb|ADY42435.1| Transmembrane and TPR repeat-containing protein [Ascaris suum]
Length = 740
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+ AE + A + A NL N + R Y + ++L + + A N
Sbjct: 502 GDSLTAEVSYKSAIRLNPSYDHAMNNLANIYLVRGQYSEAEKLLKKCVQIRSGFAAAWMN 561
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
LGLA ++ +S ECF +I P+ P+ LY + +LY
Sbjct: 562 LGLAMLGQRKFKESEECFRMSLSIRPNYPDCLYNLGNLY 600
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 168 AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL 227
A NL+ IY ++G+ +AEK+ ++ + +AA++NLG + + + + +E + +L
Sbjct: 524 AMNNLANIYLVRGQYSEAEKLLKKCVQIRSGFAAAWMNLGLAMLGQRKFKESEECFRMSL 583
Query: 228 DNDATCIEALYNLG 241
+ LYNLG
Sbjct: 584 SIRPNYPDCLYNLG 597
>gi|440748969|ref|ZP_20928219.1| hypothetical protein C943_0783 [Mariniradius saccharolyticus AK6]
gi|436482671|gb|ELP38769.1| hypothetical protein C943_0783 [Mariniradius saccharolyticus AK6]
Length = 476
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 100/269 (37%), Gaps = 40/269 (14%)
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D ++ A NL +Y G E+A K + A D ++A+ NLGN M + Y E
Sbjct: 199 DPYSAGAWYNLGVVYNRLGRFEEAIKAYDYALIIDDAFASAYFNLGNAYMNTQQYELALE 258
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIA------ 275
Y + ++ + E LG A++ L + + F K I P + + +
Sbjct: 259 AYQNTINCEGANAENCCYLGAAYEKLENIDQAFKYFKKSAKIDPEYDDAWFGLGMCMLKK 318
Query: 276 -SLYEITGDVEQASDVN-ENLLLEAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDN 333
+E +A ++ EN DA QL +A A + P I +
Sbjct: 319 EKYFEAIHYFRKALNITKENPNYWVGLADAEYQLGN---LQASSEAYEEAINLEPGIMET 375
Query: 334 FSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLK-SCDEMTSSAATNL 392
+ +N A+ + N +AVDV+K +E+ A
Sbjct: 376 Y------------------------VNLAIIYFDQNRFEEAVDVMKEGIEELPGEAELYY 411
Query: 393 SFIYFLVSSEFQYLPTSEVPIYLENLLTV 421
+ FL+ + +E YLEN LT+
Sbjct: 412 RMVVFLLKTA----KYTEAFSYLENALTL 436
>gi|428179456|gb|EKX48327.1| hypothetical protein GUITHDRAFT_105934 [Guillardia theta CCMP2712]
Length = 813
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 108/257 (42%), Gaps = 45/257 (17%)
Query: 19 IDESCICARNQ--DFKAALEKAKLASNKERVLIKLQEQF--GHADSHNIELTFSNINRKK 74
++ + + A NQ + + L+K A + ++++KL GHA N+ R
Sbjct: 152 LNPTFVAAYNQLGNAYSGLQKINKAEDAYKMVVKLSPSAPEGHA----------NLARML 201
Query: 75 NARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLA 134
AR + + + + ++S+ + PS+ +N Y +NS + +A
Sbjct: 202 QARGDTSSGVKAIQKA---------ISSSPVQNPSLYHELANAY-------KNSGNIKMA 245
Query: 135 QDLEINKAVTFLRMNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACT 194
Q +A+ L +D LK EM + A +L I++ QG++ +A +
Sbjct: 246 Q-----RAIRVL--------LDRLKERHEM-AEAYMSLGMIFWGQGQLVRARNLLSAGLK 291
Query: 195 ADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSL 254
++ S NLG DY + ++ + EA LG +KHLN + +++
Sbjct: 292 ERSF-SEGQANLGIVLSDLGDYKAAVVAFKESMKLNPLLAEAPKCLGDTYKHLNRWDEAI 350
Query: 255 ECFHKLQAIVPSMPEVL 271
+ + K +I P+ E L
Sbjct: 351 KMYKKALSIRPTYWEAL 367
>gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2]
gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2]
Length = 357
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
QG++E+ K ++A D + A+ +LG DY K + L+ + + +
Sbjct: 144 QGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPSDKITYF 203
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ A+ +N +++ +L I P LYQ++ LY G E+A ++ E ++
Sbjct: 204 MITEAYHEMNRKDLAVKALERLLEIDPDNIPALYQLSQLYRELGSEEKAREMEEKIM 260
>gi|159028889|emb|CAO90694.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1271
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 18/235 (7%)
Query: 178 LQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEAL 237
L GE+E A+ +A D + ++ NLG A + + Y A+++ A
Sbjct: 1010 LTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAF 1069
Query: 238 YNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLLE 297
YNLGL ++ L E ++ C+ + + EV +A LY+ + +A LL
Sbjct: 1070 YNLGLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLL 1129
Query: 298 AVRNDALSQLHREMKHEAE---KCILTSAKLIAPSIEDNFSN---GYNWCVQSIRNSAHS 351
N L + +E E K + K+I +D + G ++ Q + A S
Sbjct: 1130 QPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKS 1189
Query: 352 SLAQDLEI---------NKAVTFLRMNDVSQAVDVLKS---CDEMTSSAATNLSF 394
+ +E+ N V + D +AVD + CD A T L F
Sbjct: 1190 CFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDCFRQSLRCDPANKLAHTALLF 1244
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 153 QAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMA 212
QA+ V D + + NL F+ QG++E+A ++A + +AF NLG
Sbjct: 1023 QAIKV----DPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLGLVYEQ 1078
Query: 213 REDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY 272
++ K Y H++ D+T +E +L + Y+ + + + + P E+ Y
Sbjct: 1079 LKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRY 1138
Query: 273 QIASLYEITGDVEQASDVNENLLLEAVRNDALSQLHREMKHEAEKCILTSAK 324
+ + ++A + +++A DA++ LH + ++ +K +LT AK
Sbjct: 1139 NLGVVLYEQEKFDKAVSCFQK-IIQAKPQDAIAYLHLGISYKQQK-LLTKAK 1188
>gi|432328071|ref|YP_007246215.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
gi|432134780|gb|AGB04049.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
Length = 596
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Query: 145 FLRMNDVSQAVDVLKS-CDEMTSSAATNLSFIYFLQGE-VEQAEKMAEEACTADTYNSAA 202
++RM ++ +A V+++ + + LS + + E AEK+ E
Sbjct: 83 YVRMGNLKRARRVIRAGLKKFKNENFQYLSAVALVNAEDYNLAEKVLRELMKKGA-KDLH 141
Query: 203 FVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQA 262
FV LGN R + K E Y AL+ + +EA N G L Y ++L+C+ +
Sbjct: 142 FVVLGNIYFGRGEKEKALEFYDRALEENPENVEAWNNKGFLLFTLGLYEEALKCYDRALE 201
Query: 263 IVPSMPEVLYQIASLYEITGDVEQA 287
I PS E Y + G + A
Sbjct: 202 IEPSYKEAWYNRGYTHHAMGQLSAA 226
>gi|418313235|ref|ZP_12924729.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21334]
gi|365236506|gb|EHM77395.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21334]
Length = 222
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|254468026|ref|ZP_05081432.1| O-linked GlcNAc transferase, putative [beta proteobacterium KB13]
gi|207086836|gb|EDZ64119.1| O-linked GlcNAc transferase, putative [beta proteobacterium KB13]
Length = 245
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
QG+ ++A+K+ + C +D +A F+ L C + ++ ++ HAL D AL+
Sbjct: 15 QGKFKKAKKILSD-CKSDK--NALFL-LSKCYKSEKNLLESLSCLEHALKIDPKFDLALF 70
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
++ L HK L Y ++ F+ I P + E + + +LY
Sbjct: 71 DIALLHKSLKNYDSAVSAFYSFLKIHPDVYEAYFNLGNLY 110
>gi|386813873|ref|ZP_10101097.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403370|dbj|GAB63978.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 576
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 49 IKLQEQFGHADSHNIELTFSNINRKKNA-----RAVR-NDALSQLHREM-----KHEAEK 97
++LQ F A N+ L +S N+ K+A +A++ N +++ H + K++ ++
Sbjct: 289 LELQPDFAEA-YFNLGLIYSEENKTKDAVSSLEQAIKLNPKIAEAHFTLGEIYTKNDMQE 347
Query: 98 CILTSAKLIAPSIEDNFSNGYNWC----VQSIRNSAHSSLAQDLEINK---------AVT 144
L+ K S D YN+ + + + + ++ ++ +E+N +
Sbjct: 348 EALSEYKKAIDSKPDYAEAYYNYAELNATKGMHDRSIAAWSKTIELNPNNTDAYFNLGIA 407
Query: 145 FLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSA 201
+ D+ +A+ + E+ + A NL+ Y +G +++ + E+ ++
Sbjct: 408 YYNQGDLDKAISLWIKVIEINPNDYDALINLADAYNAKGLLDKTIQTWEKITEVYPNHAG 467
Query: 202 AFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQ 261
+ LGN + Y + A++ D + A YNLGL ++ + ++ D++E + K+
Sbjct: 468 LYYKLGNAYAKKNMYNTALVQWEKAIEIDPNLVNAYYNLGLTYQKIGKWDDAIEAYKKVL 527
Query: 262 AI 263
I
Sbjct: 528 DI 529
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 102 SAKLIAPSIEDNFSNGYNWCVQSIRNSAHSSLAQDLEINKAVTFLRMNDVSQAVDVLKSC 161
S KL + + +F+ G + +S+ + A S Q +E+N S
Sbjct: 186 SIKLDLKNADAHFTLGLVYYTKSLYDKATSEFKQTIELN-------------------SK 226
Query: 162 DEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKE 221
D + A L +Y+ QG++E++ + A +D A+ NLG A+ + +
Sbjct: 227 D---AEAHNYLGLLYYQQGDLEESIAEHKAALLSDQNYPDAYNNLGIALYAKNNTKDAID 283
Query: 222 LYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
+ L+ EA +NLGL + N+ D++ + + P + E + + +Y
Sbjct: 284 AFKKTLELQPDFAEAYFNLGLIYSEENKTKDAVSSLEQAIKLNPKIAEAHFTLGEIY 340
>gi|357441255|ref|XP_003590905.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479953|gb|AES61156.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 986
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 3/140 (2%)
Query: 151 VSQAVDVLKSCDEMTSS---AATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLG 207
V +A+ C + + A TNL IY V A + T SA + NL
Sbjct: 350 VEEAIQCYNQCLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLA 409
Query: 208 NCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSM 267
+ +Y Y L D + L N G +K + SD+++ + + + P+M
Sbjct: 410 IIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRPTM 469
Query: 268 PEVLYQIASLYEITGDVEQA 287
E +AS Y+ +G VE A
Sbjct: 470 AEAHANLASAYKDSGHVEAA 489
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 14/220 (6%)
Query: 72 RKKNARAVRNDALSQLHREMKHEAEKCILTSAKLIAPSIEDNFSNGYNWC-VQSIRNSAH 130
R A A N A + + + EA +C A I P + D SN N Q + A+
Sbjct: 160 RPNFADAWSNLASAYMRKGRLTEAAQCC-RQALAINPLMVDAHSNLGNLMKAQGLVQEAY 218
Query: 131 SSLAQDLEI---------NKAVTFLRMNDVSQAVDVLKSCDEMTSS---AATNLSFIYFL 178
S + L I N A F+ D ++A+ K ++ S A NL +Y
Sbjct: 219 SCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKA 278
Query: 179 QGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALY 238
G ++A + A A+ NL + + Y A+ D +EA
Sbjct: 279 LGMPQEAIACYQHALQTRPNYGMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYN 338
Query: 239 NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
NLG A K + ++++C+++ ++ P+ P+ L + ++Y
Sbjct: 339 NLGNALKDVGRVEEAIQCYNQCLSLQPNHPQALTNLGNIY 378
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Query: 160 SCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKG 219
+CD A NL G VE+A + + + + A NLGN M + V
Sbjct: 328 ACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLSLQPNHPQALTNLGNIYM-EWNMVAA 386
Query: 220 KELYVHALDNDATCIEALY-NLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLY 278
Y A N T + A Y NL + +K Y+D++ C++++ I P + L + Y
Sbjct: 387 AASYYKATLNVTTGLSAPYNNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTY 446
Query: 279 EITGDVEQA 287
+ G V A
Sbjct: 447 KEIGRVSDA 455
>gi|417901064|ref|ZP_12544941.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21266]
gi|341846223|gb|EGS87420.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21266]
Length = 222
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|323456844|gb|EGB12710.1| O-linked GlcNAc transferase-like protein [Aureococcus
anophagefferens]
Length = 273
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 167 SAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHA 226
+A NL ++ GE+E A + A D + A VN+GN M + Y A
Sbjct: 123 AAHYNLGYVLEELGEIEPALREFRTASALDPNDKDALVNIGNILMQLHEIEAAIAEYKKA 182
Query: 227 LDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDV-- 284
+ D T + A YNL A LN++ + + F K + P + + + +++ +G +
Sbjct: 183 VALDPTSVMAFYNLASAAHALNQHDLAKQYFAKTILLDPHYADAHFNLGIVHQESGVLDE 242
Query: 285 -----EQASDVNENLLLEAVR 300
++A+ +N + L+EAVR
Sbjct: 243 ALKCYDEAARLNPD-LVEAVR 262
>gi|428167704|gb|EKX36659.1| hypothetical protein GUITHDRAFT_40001, partial [Guillardia theta
CCMP2712]
Length = 279
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 182 VEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLG 241
V+ A + +A D ++ ++ LG C + DY K Y A+ D ++G
Sbjct: 150 VQTAITLLTKATELDPNDAQSWYILGRCQVGIRDYNKAHFAYQQAVYRDERNPTLWCSIG 209
Query: 242 LAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
+ + + +Y ++L+ + K P M V Y + +LYE A D ++ L
Sbjct: 210 ILYFKIGQYKEALDAYSKAIRFNPYMSAVWYNLGTLYESCKQPPDAKDAYQHAL 263
>gi|410938931|ref|ZP_11370771.1| stage II sporulation protein E [Leptospira noguchii str. 2006001870]
gi|410786132|gb|EKR75083.1| stage II sporulation protein E [Leptospira noguchii str. 2006001870]
Length = 1060
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 180 GEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYN 239
G+V+QA ++ + T DT N LG + +DY E+ + L D E +
Sbjct: 924 GKVDQALELLKTGYTHDTANQKINKLLGLLSFKGKDYTTAIEVLNNYLKTDPGLHEYWFY 983
Query: 240 LGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQASDVNENLL 295
L +A+K + +Y +L+ KL I P L ++ +Y + + A +V L+
Sbjct: 984 LSIANKKVGKYEQALQASLKLNDIQPENLSNLVNLSDIYRLMDQFDLAEEVARKLI 1039
>gi|418693448|ref|ZP_13254499.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H1]
gi|409958758|gb|EKO17648.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H1]
Length = 187
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 137 LEINK-AVTFLRMNDVSQAVDVLKSCDEMTSSAA---TNLSFIYFLQGEVEQAEKMAEEA 192
E N+ +T L ++ QA + ++ + N+ Y +G+++QA ++
Sbjct: 35 FEFNQQGITLLSKGNLVQARSFFEKAVKLNPQSPEYVNNVGVTYLNEGKLDQAIVFFAKS 94
Query: 193 CTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSD 252
D AF NLG +++ K + Y+ AL D T E +NLG+ + +
Sbjct: 95 AERDPNYVRAFYNLGVAYQNQQNNEKAVQNYLKALAIDKTFAEVYFNLGIVYARMGNKKQ 154
Query: 253 SLECFHKLQAIVPS 266
+++ + K + P+
Sbjct: 155 AIDNYQKFIEVAPA 168
>gi|418430605|ref|ZP_13003515.1| hypothetical protein MQE_02233 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387718117|gb|EIK06111.1| hypothetical protein MQE_02233 [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 222
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|297835872|ref|XP_002885818.1| hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp.
lyrata]
gi|297331658|gb|EFH62077.1| hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp.
lyrata]
Length = 1058
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 12/160 (7%)
Query: 136 DLEINKAVTFLR-MNDVSQAVDVLKSCDEMTSSAATNLSFIYFLQGE---VEQAEKMAEE 191
DL+ N ++ + M+ + QA ++ C +SA L+ +F G+ VEQ + A
Sbjct: 214 DLQANDSIGMRKGMDRMQQAFEIYPYC----ASALNYLANHFFFTGQHFLVEQLTETALA 269
Query: 192 ACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHAL----DNDATCIEALYNLGLAHKHL 247
T S +F NL ++ DY K Y+ A+ + + + LG L
Sbjct: 270 VTTHGPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETNNKPQEFVFPYFGLGQVQLKL 329
Query: 248 NEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E S+ F K+ + P E L + LY G ++A
Sbjct: 330 GELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNDKA 369
>gi|91772658|ref|YP_565350.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
gi|91711673|gb|ABE51600.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
6242]
Length = 1049
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 150 DVSQAVDVLKSCDEMTSSAATNLSFIYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNC 209
D + D++ + S A + F ++ G+ A + + Y++AA+ N GN
Sbjct: 855 DANDCYDIVLINEPANSLALSRKGFNLYMLGDYIGAMDQYDLVIAKNPYDAAAWYNKGNV 914
Query: 210 AMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPE 269
A Y + Y+ A++ I A YNLG + ++ + K AI P+
Sbjct: 915 AYLTSSYAGSTQFYLKAVELQPKSITAWYNLGYIANIRGDVDTAITYYEKALAIDPNAAS 974
Query: 270 VLY 272
LY
Sbjct: 975 ALY 977
>gi|406910817|gb|EKD50743.1| hypothetical protein ACD_62C00440G0005 [uncultured bacterium]
Length = 278
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 175 IYFLQGEVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCI 234
+ F Q + + + + ++ T D N++ +LG + + Y AL+ + C
Sbjct: 134 VAFEQQDYDLSATLYKQMLTTDPNNASVQNSLGLIYIQKGLYSSATSYLEKALELNENCP 193
Query: 235 EALYNLGLAHKHLNEYSDSLECFHKLQAIVPSMPEVLYQIASLYEITGDVEQA 287
E NLG L E ++ F K + P+ P+ + +A LYE GDV A
Sbjct: 194 ECFNNLGYLKSLLGETVEAAAYFEKAMGLSPNYPDPYFNLAVLYEKQGDVGNA 246
>gi|258424046|ref|ZP_05686928.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|417890172|ref|ZP_12534251.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21200]
gi|418282027|ref|ZP_12894816.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21202]
gi|418889434|ref|ZP_13443567.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1524]
gi|257845667|gb|EEV69699.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|341855865|gb|EGS96709.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21200]
gi|365171577|gb|EHM62402.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21202]
gi|377752942|gb|EHT76860.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1524]
Length = 222
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQESIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|145548981|ref|XP_001460170.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427999|emb|CAK92773.1| unnamed protein product [Paramecium tetraurelia]
Length = 151
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
+ E+A K EA + + A+ N G Y + E Y A+ + + A YN
Sbjct: 27 QYEEANKCYNEAISINPKYVNAWNNKGIALRNLNQYEEAIECYNEAISINPKYVYAWYNK 86
Query: 241 GLAHKHLNEYSDSLECFHKLQAIVPSMPEVLY 272
G+A ++LN+Y +++EC+++ +I P + E +
Sbjct: 87 GIALRNLNQYEEAIECYNEAISINPKLAEAWF 118
>gi|427707448|ref|YP_007049825.1| family 2 glycosyl transferase [Nostoc sp. PCC 7107]
gi|427359953|gb|AFY42675.1| glycosyl transferase family 2 [Nostoc sp. PCC 7107]
Length = 415
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 201 AAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKL 260
A+ NLGN D K+ Y AL D + YNLG+ K LN ++D++ C+ K
Sbjct: 295 GAYNNLGNLRKDAGDLNGAKKAYETALKIDPDFVTGHYNLGMTLKALNLFTDAIACYQKA 354
Query: 261 QAIVPSMPEVLYQIASLYEITGDVEQASDVNENLLL 296
+ P E + + G+++ + +N +L
Sbjct: 355 IRLNPYYAEAYQNLGVVQLKVGNLQASKTAFKNAIL 390
>gi|257425745|ref|ZP_05602169.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428405|ref|ZP_05604803.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431043|ref|ZP_05607422.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257433729|ref|ZP_05610087.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257436644|ref|ZP_05612688.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
M876]
gi|282904201|ref|ZP_06312089.1| TPR domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282906027|ref|ZP_06313882.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282911257|ref|ZP_06319059.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914425|ref|ZP_06322211.1| TPR domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282919395|ref|ZP_06327130.1| hypothetical protein SASG_00701 [Staphylococcus aureus subsp.
aureus C427]
gi|282924720|ref|ZP_06332388.1| hypothetical protein SARG_02268 [Staphylococcus aureus subsp.
aureus C101]
gi|283958381|ref|ZP_06375832.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503500|ref|ZP_06667347.1| hypothetical protein SCAG_02022 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510517|ref|ZP_06669223.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
M809]
gi|293531057|ref|ZP_06671739.1| TPR domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|295428197|ref|ZP_06820829.1| hypothetical protein SIAG_00726 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590836|ref|ZP_06949474.1| TPR domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|384867407|ref|YP_005747603.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|415682420|ref|ZP_11447736.1| hypothetical protein CGSSa00_07635 [Staphylococcus aureus subsp.
aureus CGS00]
gi|417887978|ref|ZP_12532097.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21195]
gi|418564593|ref|ZP_13129014.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21264]
gi|418582547|ref|ZP_13146625.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418597448|ref|ZP_13160976.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21342]
gi|418601565|ref|ZP_13164991.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21345]
gi|418892350|ref|ZP_13446463.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418898255|ref|ZP_13452325.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418901125|ref|ZP_13455181.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418909471|ref|ZP_13463467.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|418917518|ref|ZP_13471477.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418923302|ref|ZP_13477218.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418982626|ref|ZP_13530334.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418986294|ref|ZP_13533978.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|257271439|gb|EEV03585.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275246|gb|EEV06733.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278246|gb|EEV08888.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281822|gb|EEV11959.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257283995|gb|EEV14118.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
M876]
gi|282313555|gb|EFB43950.1| hypothetical protein SARG_02268 [Staphylococcus aureus subsp.
aureus C101]
gi|282317205|gb|EFB47579.1| hypothetical protein SASG_00701 [Staphylococcus aureus subsp.
aureus C427]
gi|282321606|gb|EFB51931.1| TPR domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282324952|gb|EFB55262.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282331319|gb|EFB60833.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595819|gb|EFC00783.1| TPR domain protein [Staphylococcus aureus subsp. aureus C160]
gi|283790530|gb|EFC29347.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920325|gb|EFD97391.1| TPR domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095166|gb|EFE25431.1| hypothetical protein SCAG_02022 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466881|gb|EFF09401.1| TPR repeat-containing protein [Staphylococcus aureus subsp. aureus
M809]
gi|295128555|gb|EFG58189.1| hypothetical protein SIAG_00726 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575722|gb|EFH94438.1| TPR domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|312437912|gb|ADQ76983.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|315195520|gb|EFU25907.1| hypothetical protein CGSSa00_07635 [Staphylococcus aureus subsp.
aureus CGS00]
gi|341857007|gb|EGS97834.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21195]
gi|371975730|gb|EHO93022.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21264]
gi|374394575|gb|EHQ65857.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21342]
gi|374398279|gb|EHQ69463.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21345]
gi|377702522|gb|EHT26844.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377703672|gb|EHT27985.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377704907|gb|EHT29216.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377710957|gb|EHT35195.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377730644|gb|EHT54711.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377735261|gb|EHT59297.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377750692|gb|EHT74630.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377752118|gb|EHT76042.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|377761290|gb|EHT85166.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
Length = 222
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 181 EVEQAEKMAEEACTADTYNSAAFVNLGNCAMAREDYVKGKELYVHALDNDATCIEALYNL 240
E+E+AE+ ++A T D N F NL N ++ Y + +LY AL + ++ Y +
Sbjct: 49 EIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQESIKLYQQALQTEIEQVDCNYMI 108
Query: 241 GLAHKHLNEYSDSL 254
G+A L + +L
Sbjct: 109 GMAFNQLESFKLAL 122
>gi|170104862|ref|XP_001883644.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641279|gb|EDR05540.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 183
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 207 GNCAMAREDYVKGKELYVHALDNDATCIEALYNLGLAHKHLNEYSDSLECFHKLQAIVPS 266
G + D KELY + + +L+NLG+ H HL EY +++E + + ++ PS
Sbjct: 26 GTLKLEEGDVQAAKELYQRSAEIKRNA-SSLFNLGVTHYHLKEYDEAIEAWKESISLQPS 84
Query: 267 MPEVLYQIASLYEIT 281
P+ +AS Y I+
Sbjct: 85 SPDAHTNLASAYIIS 99
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.128 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,635,384,900
Number of Sequences: 23463169
Number of extensions: 206999694
Number of successful extensions: 699529
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2494
Number of HSP's successfully gapped in prelim test: 2287
Number of HSP's that attempted gapping in prelim test: 683316
Number of HSP's gapped (non-prelim): 15572
length of query: 425
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 280
effective length of database: 8,957,035,862
effective search space: 2507970041360
effective search space used: 2507970041360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)