BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1864
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94900|GLUCL_DROME Glutamate-gated chloride channel OS=Drosophila melanogaster
GN=GluClalpha PE=1 SV=2
Length = 456
Score = 234 bits (598), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 146/230 (63%), Gaps = 59/230 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EYSVQLTFREQW DERLK++D GR+KYLTLTEA+RVW MP++
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVW------------------MPDL 123
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+ +G N+ V++ + FP S
Sbjct: 124 FFSNEKEG-------HFHNIIMPNVYIRI---------------FPNGS----------- 150
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
+ Y ISLTL+CPMNLKLYPLDRQ CSL+MASYGWTT+DL+FLWKEGDPVQ
Sbjct: 151 --------VLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQ 202
Query: 181 VVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
VVKNLHLPRFTLEKF TDYCNSKTNTG YSCLKVDLLFKREFSYYLIQIY
Sbjct: 203 VVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIY 252
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 49/62 (79%), Gaps = 6/62 (9%)
Query: 77 LDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTR----SKRIDVISRITFPLVFALFNLTYW 132
L+ QCEVHM P+ P NCC++WL+KFPTR SKRIDVISRITFPLVFALFNL YW
Sbjct: 388 LEKRLQCEVHMQAPKRP--NCCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYW 445
Query: 133 ST 134
ST
Sbjct: 446 ST 447
>sp|Q17328|GLUCB_CAEEL Glutamate-gated chloride channel subunit beta OS=Caenorhabditis
elegans GN=glc-2 PE=1 SV=1
Length = 434
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 116/236 (49%), Gaps = 65/236 (27%)
Query: 1 EYSVQLTFREQWLDERLKYND--YDGRIKYLTLTEASR-VWMPDLFFSNEKEGHFHNIIM 57
EYS+QLTFREQW+D RL Y + + +LT+ + +W+PD FF EK H H I
Sbjct: 77 EYSIQLTFREQWIDPRLAYENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLI-- 134
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISR 117
D++NM
Sbjct: 135 ------------------DMENM------------------------------------- 139
Query: 118 ITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD 177
F ++ + Y S ISLT SCPM L+LYPLD QSC+ + SY T +D+++ W
Sbjct: 140 --FLRIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPST 197
Query: 178 PVQVVKNL--HLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
PVQ+ + LP F L+ + T+ C S TNTG+Y CL++ LLFKR+FSYYL+Q+Y
Sbjct: 198 PVQLKPGVGSDLPNFILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLY 253
>sp|P57695|GLRA1_BOVIN Glycine receptor subunit alpha-1 OS=Bos taurus GN=GLRA1 PE=2 SV=1
Length = 457
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 108/231 (46%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G+VLYSI RIT
Sbjct: 145 LLRISRNGNVLYSI------------------------------------------RITL 162
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
L +CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQ
Sbjct: 163 TL-----------------ACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQ 205
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V L LP+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 206 VADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>sp|P23415|GLRA1_HUMAN Glycine receptor subunit alpha-1 OS=Homo sapiens GN=GLRA1 PE=1 SV=2
Length = 457
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 108/231 (46%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G+VLYSI RIT
Sbjct: 145 LLRISRNGNVLYSI------------------------------------------RITL 162
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
L +CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQ
Sbjct: 163 TL-----------------ACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQ 205
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V L LP+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 206 VADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>sp|Q64018|GLRA1_MOUSE Glycine receptor subunit alpha-1 OS=Mus musculus GN=Glra1 PE=1 SV=2
Length = 457
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 108/231 (46%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G+VLYSI RIT
Sbjct: 145 LLRISRNGNVLYSI------------------------------------------RITL 162
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
L +CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQ
Sbjct: 163 TL-----------------ACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQ 205
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V L LP+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 206 VADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>sp|P07727|GLRA1_RAT Glycine receptor subunit alpha-1 OS=Rattus norvegicus GN=Glra1 PE=1
SV=4
Length = 457
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 108/231 (46%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G+VLYSI RIT
Sbjct: 145 LLRISRNGNVLYSI------------------------------------------RITL 162
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
L +CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQ
Sbjct: 163 TL-----------------ACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQ 205
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V L LP+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 206 VADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>sp|O93430|GLRA1_DANRE Glycine receptor subunit alphaZ1 OS=Danio rerio GN=glra1 PE=2 SV=1
Length = 444
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 107/231 (46%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 81 DYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 140
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G+VLYSI RIT
Sbjct: 141 LLRISKNGNVLYSI------------------------------------------RITL 158
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
L +CPM+LK +P+D Q+C +++ S+G+T +DLIF W E VQ
Sbjct: 159 VL-----------------ACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQ 201
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V L LP+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 202 VADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 252
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLS 140
F +R+KRID +SR+ FPLVF +FN+ YW T + S
Sbjct: 403 FISRAKRIDTVSRVAFPLVFLIFNIFYWITYKIIRS 438
>sp|P91730|GLUCB_HAECO Glutamate-gated chloride channel subunit beta OS=Haemonchus
contortus PE=2 SV=1
Length = 432
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 107/236 (45%), Gaps = 65/236 (27%)
Query: 1 EYSVQLTFREQWLDERLKYN--DYDGRIKYLTLTE-ASRVWMPDLFFSNEKEGHFHNIIM 57
EYS+QLTFREQWLD RL Y Y K+LT+ S +W+PD FF EK H H I
Sbjct: 80 EYSMQLTFREQWLDSRLAYAHLGYHNPPKFLTVPHIKSNLWIPDTFFPTEKAAHRHLI-- 137
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISR 117
D DNM
Sbjct: 138 ------------------DTDNM------------------------------------- 142
Query: 118 ITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD 177
F + + Y S IS+T SC M L+LYPLD Q C + SY T D+++ W
Sbjct: 143 --FLRIHPDGKVLYSSRISITSSCHMQLQLYPLDLQFCDFDLVSYAHTMKDIVYEWDPLA 200
Query: 178 PVQVVKNLH--LPRFTLEKFYT-DYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
PVQ+ + LP F L T D C S TNTG+Y+CL++ L KR+FSYYL+Q+Y
Sbjct: 201 PVQLKPGVGSDLPNFQLTNITTNDDCTSHTNTGSYACLRMQLTLKRQFSYYLVQLY 256
>sp|Q7TNC8|GLRA2_MOUSE Glycine receptor subunit alpha-2 OS=Mus musculus GN=Glra2 PE=2 SV=1
Length = 452
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G VLYSI + +T+ C L FP +DV
Sbjct: 151 LLRISKNGKVLYSI---------RLTLTL-------SCPMDLKNFP-----MDV------ 183
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
+C M L+ S+G+T +DLIF W PVQ
Sbjct: 184 ------------------QTCTMQLE--------------SFGYTMNDLIFEWLSDGPVQ 211
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V + L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 212 VAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWST 134
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T
Sbjct: 397 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWIT 440
>sp|P23416|GLRA2_HUMAN Glycine receptor subunit alpha-2 OS=Homo sapiens GN=GLRA2 PE=2 SV=1
Length = 452
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G VLYSI + +T+ C L FP +DV
Sbjct: 151 LLRISKNGKVLYSI---------RLTLTL-------SCPMDLKNFP-----MDV------ 183
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
+C M L+ S+G+T +DLIF W PVQ
Sbjct: 184 ------------------QTCTMQLE--------------SFGYTMNDLIFEWLSDGPVQ 211
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V + L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 212 VAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWST 134
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T
Sbjct: 397 LPQPPKDG--DAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWIT 440
>sp|Q75NA5|GBRB_MUSDO Gamma-aminobutyric acid receptor subunit beta OS=Musca domestica
GN=Rdl PE=1 SV=2
Length = 576
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 63/233 (27%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
++++ FR+ W D RL Y G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 101 DFTLDFYFRQFWTDPRLAYRKRPG-VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 159
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +IR+H GS+ TRS R+
Sbjct: 160 NEFIRVHHSGSI------------------------------------TRSIRL------ 177
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-D 177
++T SCPMNL+ +P+DRQ C +++ S+G+T D+ + W EG +
Sbjct: 178 -----------------TITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 220
Query: 178 PVQVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V V + LP+F + TG YS L ++ F R YYLIQIY
Sbjct: 221 SVGVSSEVSLPQFKVLGHRQRAVEISLTTGNYSRLACEIQFVRSMGYYLIQIY 273
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+ F FNL YW
Sbjct: 535 IDKYSRIVFPVCFVCFNLMYW 555
>sp|P24524|GLRA3_RAT Glycine receptor subunit alpha-3 OS=Rattus norvegicus GN=Glra3 PE=2
SV=1
Length = 464
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G+VLYSI + +T+ C L FP +DV
Sbjct: 150 LLRIFKNGNVLYSI---------RLTLTL-------SCPMDLKNFP-----MDV------ 182
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
+C M L+ S+G+T +DLIF W++ PVQ
Sbjct: 183 ------------------QTCIMQLE--------------SFGYTMNDLIFEWQDEAPVQ 210
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V + L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 211 VAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 421 FIDRAKKIDTISRACFPLAFLIFNIFYW 448
>sp|O75311|GLRA3_HUMAN Glycine receptor subunit alpha-3 OS=Homo sapiens GN=GLRA3 PE=2 SV=2
Length = 464
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G+VLYSI + +T+ C L FP +DV
Sbjct: 150 LLRIFKNGNVLYSI---------RLTLTL-------SCPMDLKNFP-----MDV------ 182
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
+C M L+ S+G+T +DLIF W++ PVQ
Sbjct: 183 ------------------QTCIMQLE--------------SFGYTMNDLIFEWQDEAPVQ 210
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V + L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 211 VAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 421 FIDRAKKIDTISRACFPLAFLIFNIFYW 448
>sp|Q91XP5|GLRA3_MOUSE Glycine receptor subunit alpha-3 OS=Mus musculus GN=Glra3 PE=2 SV=2
Length = 464
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G+VLYSI + +T+ C L FP +DV
Sbjct: 150 LLRIFKNGNVLYSI---------RLTLTL-------SCPMDLKNFP-----MDV------ 182
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
+C M L+ S+G+T +DLIF W++ PVQ
Sbjct: 183 ------------------QTCIMQLE--------------SFGYTMNDLIFEWQDEAPVQ 210
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V + L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 211 VAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 421 FIDRAKKIDTISRACFPLAFLIFNIFYW 448
>sp|P22771|GLRA2_RAT Glycine receptor subunit alpha-2 OS=Rattus norvegicus GN=Glra2 PE=1
SV=1
Length = 452
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+RI G VLYSI + +T+ C L FP +DV
Sbjct: 151 LLRISKNGKVLYSI---------RLTLTL-------SCPMDLKNFP-----MDV------ 183
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
+C M L+ S+ +T +DLIF W PVQ
Sbjct: 184 ------------------QTCTMQLE--------------SFEYTMNDLIFEWLSDGPVQ 211
Query: 181 VVKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V + L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 212 VAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWST 134
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T
Sbjct: 397 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWIT 440
>sp|Q9BLY8|GBRB_DROSI Gamma-aminobutyric acid receptor subunit beta OS=Drosophila
simulans GN=Rdl PE=2 SV=1
Length = 606
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 63/233 (27%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
++++ FR+ W D RL Y G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPG-VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 161
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +IR+H GS+ TRS R+
Sbjct: 162 NEFIRVHHSGSI------------------------------------TRSIRL------ 179
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-D 177
++T SCPMNL+ +P+DRQ C +++ S+G+T D+ + W EG +
Sbjct: 180 -----------------TITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 222
Query: 178 PVQVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V V + LP+F + TG YS L ++ F R YYLIQIY
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIY 275
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+ F FNL YW
Sbjct: 566 IDKYSRIVFPVCFVCFNLMYW 586
>sp|P25123|GBRB_DROME Gamma-aminobutyric acid receptor subunit beta OS=Drosophila
melanogaster GN=Rdl PE=2 SV=3
Length = 606
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 63/233 (27%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
++++ FR+ W D RL Y G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPG-VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 161
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +IR+H GS+ TRS R+
Sbjct: 162 NEFIRVHHSGSI------------------------------------TRSIRL------ 179
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-D 177
++T SCPMNL+ +P+DRQ C +++ S+G+T D+ + W++G
Sbjct: 180 -----------------TITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 178 PVQVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V + + LP+F + TG YS L ++ F R YYLIQIY
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIY 275
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+ F FNL YW
Sbjct: 566 IDKYSRIVFPVCFVCFNLMYW 586
>sp|Q61603|GLRA4_MOUSE Glycine receptor subunit alpha-4 OS=Mus musculus GN=Glra4 PE=2 SV=3
Length = 456
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DL+F W E P VQV
Sbjct: 153 IFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQV 212
Query: 182 VKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L ++ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 AEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
Y R + G L + D M ++ P TP + + R+KRID ISR F
Sbjct: 371 YFRGYGLGHCLQA-RDGGPMEGSSIYSPQPPTPLLKEGETMRKLYVDRAKRIDTISRAVF 429
Query: 121 PLVFALFNLTYW 132
P F +FN+ YW
Sbjct: 430 PFTFLVFNIFYW 441
>sp|Q9GJS9|GLRB_BOVIN Glycine receptor subunit beta OS=Bos taurus GN=GLRB PE=2 SV=1
Length = 497
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 67/236 (28%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISR 117
N+ + I G VL S+ R+ +
Sbjct: 159 ENILLFIFRDGDVLVSM------------------------------------RLSIT-- 180
Query: 118 ITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD 177
++ PL LF PM D Q C +++ S+G+TTDDL F+W+ GD
Sbjct: 181 LSCPLDLTLF--------------PM-------DTQRCKMQLESFGYTTDDLRFIWQSGD 219
Query: 178 PVQVVKNLHLPRFTLEKFYTDYCNSK---TNTGAYSCLKVDLLFKREFSYYLIQIY 230
PVQ+ K + LP+F ++K +Y N TG Y+C++V +R+ +Y++ +Y
Sbjct: 220 PVQLEK-IALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 38.9 bits (89), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 81 RQCEVHMTVPQTPRKNCCRSWLAK--FPTRSKRIDVISRITFPLVFALFNLTYWS 133
+ EV+ + ++ KN + AK PT +KRID+ +R FP F FN+ YWS
Sbjct: 440 KPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARALFPFCFLFFNVIYWS 494
>sp|P48167|GLRB_HUMAN Glycine receptor subunit beta OS=Homo sapiens GN=GLRB PE=1 SV=1
Length = 497
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 67/236 (28%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISR 117
N+ + I G VL S+ R+ +
Sbjct: 159 ENILLFIFRDGDVLVSM------------------------------------RLSIT-- 180
Query: 118 ITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD 177
++ PL LF PM D Q C +++ S+G+TTDDL F+W+ GD
Sbjct: 181 LSCPLDLTLF--------------PM-------DTQRCKMQLESFGYTTDDLRFIWQSGD 219
Query: 178 PVQVVKNLHLPRFTLEKFYTDYCNSK---TNTGAYSCLKVDLLFKREFSYYLIQIY 230
PVQ+ K + LP+F ++K +Y N TG Y+C++V +R+ +Y++ +Y
Sbjct: 220 PVQLEK-IALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 81 RQCEVHMTVPQTPRKNCCRSWLAK--FPTRSKRIDVISRITFPLVFALFNLTYWS 133
+ EV+ + ++ KN + AK PT +KRID+ +R FP F FN+ YWS
Sbjct: 440 KPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARALFPFCFLFFNVIYWS 494
>sp|P20781|GLRB_RAT Glycine receptor subunit beta OS=Rattus norvegicus GN=Glrb PE=1
SV=1
Length = 496
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 67/236 (28%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISR 117
N+ + I G VL S+ R+ +
Sbjct: 159 ENILLFIFRDGDVLVSM------------------------------------RLSIT-- 180
Query: 118 ITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD 177
++ PL LF PM D Q C +++ S+G+TTDDL F+W+ GD
Sbjct: 181 LSCPLDLTLF--------------PM-------DTQRCKMQLESFGYTTDDLRFIWQSGD 219
Query: 178 PVQVVKNLHLPRFTLEKFYTDYCNSK---TNTGAYSCLKVDLLFKREFSYYLIQIY 230
PVQ+ K + LP+F ++K +Y N TG Y+C++V +R+ +Y++ +Y
Sbjct: 220 PVQLEK-IALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYWS 133
PT +KRID+ +R FP F FN+ YWS
Sbjct: 466 PTAAKRIDLYARALFPFCFLFFNVIYWS 493
>sp|P48168|GLRB_MOUSE Glycine receptor subunit beta OS=Mus musculus GN=Glrb PE=1 SV=2
Length = 496
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 67/236 (28%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISR 117
N+ + I G VL S+ R+ +
Sbjct: 159 ENILLFIFRDGDVLVSM------------------------------------RLSIT-- 180
Query: 118 ITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD 177
++ PL LF PM D Q C +++ S+G+TTDDL F+W+ GD
Sbjct: 181 LSCPLDLTLF--------------PM-------DTQRCKMQLESFGYTTDDLRFIWQSGD 219
Query: 178 PVQVVKNLHLPRFTLEKFYTDYCNSK---TNTGAYSCLKVDLLFKREFSYYLIQIY 230
PVQ+ K + LP+F ++K +Y N TG Y+C++V +R+ +Y++ +Y
Sbjct: 220 PVQLEK-IALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 37.7 bits (86), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYWS 133
PT +KRID+ +R FP F FN+ YWS
Sbjct: 466 PTAAKRIDLYARALFPFCFLFFNVIYWS 493
>sp|Q09453|GLRB4_CAEEL Glycine receptor subunit beta-type 4 OS=Caenorhabditis elegans
GN=ggr-1 PE=3 SV=2
Length = 473
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 64/232 (27%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++ V + F+E+W+D RL++N+ RI +W PDL+F+N + FH++ PN
Sbjct: 86 DFQVDIYFQEKWVDHRLQHNN-TKRILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNF 144
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
+ I+P G+V Y C + +TV C LA++
Sbjct: 145 LVWIYPNGTVWYD---------CRISLTV-------LCMQDLARY--------------- 173
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
PLD Q+C L++ SY + + LI W G+PV+
Sbjct: 174 ----------------------------PLDSQNCGLRILSYAYDEEQLIIRWNGGNPVE 205
Query: 181 VVKNLHLPRFTLE--KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V + + +P L+ KFYT K TG +S + RE ++++IQ Y
Sbjct: 206 VNRGIRMPDMHLKHIKFYTK--RDKYATGIWSSAVAEFHVDREITHHIIQSY 255
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+++ID SR FPL F +FN+ YW
Sbjct: 434 AQKIDRYSRALFPLAFIIFNIFYW 457
>sp|Q5JXX5|GLRA4_HUMAN Glycine receptor subunit alpha-4 OS=Homo sapiens GN=GLRA4 PE=2 SV=3
Length = 417
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F N+ Y ++L LSC M+LK +P+D Q+C++++ S+G+T DL+F W E P VQV
Sbjct: 154 IFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQV 213
Query: 182 VKNLHLPRFTLEKFYTDYCNSKT-NTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L C +K NTG ++C++V +R+ YYLIQ+Y
Sbjct: 214 AEGLTLPQFILRDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 263
>sp|P22933|GBRD_MOUSE Gamma-aminobutyric acid receptor subunit delta OS=Mus musculus
GN=Gabrd PE=2 SV=1
Length = 449
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 64/233 (27%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + + W D RL YN + + L ++W+PD F N K FH++ + N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLG-LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
IR+ P G +LYSI RIT
Sbjct: 143 LIRLQPDGVILYSI------------------------------------------RIT- 159
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPV 179
ST++ C M+L YPLD Q C L + SYG++++D+++ W E + +
Sbjct: 160 ------------STVA----CDMDLAKYPLDEQECMLDLESYGYSSEDIVYYWSENQEQI 203
Query: 180 QVVKNLHLPRFTLE--KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L L +FT+ +F T+ N K+ G + L + +R Y+IQ Y
Sbjct: 204 HGLDRLQLAQFTITSYRFTTELMNFKS-AGQFPRLSLHFQLRRNRGVYIIQSY 255
>sp|P18506|GBRD_RAT Gamma-aminobutyric acid receptor subunit delta OS=Rattus norvegicus
GN=Gabrd PE=2 SV=2
Length = 449
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 64/233 (27%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + + W D RL YN + + L ++W+PD F N K FH++ + N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLG-LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
IR+ P G +LYSI RIT
Sbjct: 143 LIRLQPDGVILYSI------------------------------------------RIT- 159
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPV 179
ST++ C M+L YP+D Q C L + SYG++++D+++ W E + +
Sbjct: 160 ------------STVA----CDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQI 203
Query: 180 QVVKNLHLPRFTLE--KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L L +FT+ +F T+ N K+ G + L + +R Y+IQ Y
Sbjct: 204 HGLDRLQLAQFTITSYRFTTELMNFKS-AGQFPRLSLHFQLRRNRGVYIIQSY 255
>sp|O14764|GBRD_HUMAN Gamma-aminobutyric acid receptor subunit delta OS=Homo sapiens
GN=GABRD PE=1 SV=2
Length = 452
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 64/233 (27%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + + W D RL YN + + L ++W+PD F N K FH++ + N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLG-LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
IR+ P G +LYSI RIT
Sbjct: 143 LIRLQPDGVILYSI------------------------------------------RIT- 159
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPV 179
ST++ C M+L YP+D Q C L + SYG++++D+++ W E + +
Sbjct: 160 ------------STVA----CDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHI 203
Query: 180 QVVKNLHLPRFTLE--KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L L +FT+ +F T+ N K+ G + L + +R Y+IQ Y
Sbjct: 204 HGLDKLQLAQFTITSYRFTTELMNFKS-AGQFPRLSLHFHLRRNRGVYIIQSY 255
>sp|P10063|GBRA2_BOVIN Gamma-aminobutyric acid receptor subunit alpha-2 OS=Bos taurus
GN=GABRA2 PE=2 SV=1
Length = 451
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 67/235 (28%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +RI G++LY++ L +C +H L FP +
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMH---------------LEDFPMDAH-------- 178
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEG 176
SCP LK SY +TT ++ ++W
Sbjct: 179 ---------------------SCP--------------LKFGSYAYTTSEVTYIWTYNAS 203
Query: 177 DPVQVVKN-LHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
D VQV + L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 204 DSVQVAPDGSRLNQYDLPGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 416 KIDRMSRIVFPVLFGTFNLVYWAT 439
>sp|P19019|GBRB3_CHICK Gamma-aminobutyric acid receptor subunit beta-3 OS=Gallus gallus
GN=GABRB3 PE=2 SV=1
Length = 476
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ ++ N TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SR+ FP F+LFNL YW
Sbjct: 451 IDRWSRMVFPFTFSLFNLIYW 471
>sp|P47869|GBRA2_HUMAN Gamma-aminobutyric acid receptor subunit alpha-2 OS=Homo sapiens
GN=GABRA2 PE=2 SV=2
Length = 451
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 67/235 (28%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +RI G++LY++ L +C +H L FP +
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMH---------------LEDFPMDAH-------- 178
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEG 176
SCP LK SY +TT ++ ++W
Sbjct: 179 ---------------------SCP--------------LKFGSYAYTTSEVTYIWTYNAS 203
Query: 177 DPVQVVKN-LHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
D VQV + L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 88 TVPQTPRKNCCRSWLAK--FPTRSKRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK F + SK ID +SRI FP++F FNL YW+T
Sbjct: 392 TTPEPNKKPENKPAEAKKTFNSVSK-IDRMSRIVFPVLFGTFNLVYWAT 439
>sp|Q5RCC5|GBRA2_PONAB Gamma-aminobutyric acid receptor subunit alpha-2 OS=Pongo abelii
GN=GABRA2 PE=2 SV=2
Length = 451
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 67/235 (28%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +RI G++LY++ L +C +H L FP +
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMH---------------LEDFPMDAH-------- 178
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEG 176
SCP LK SY +TT ++ ++W
Sbjct: 179 ---------------------SCP--------------LKFGSYAYTTSEVTYIWTYNAS 203
Query: 177 DPVQVVKN-LHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
D VQV + L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 392 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 439
>sp|P26048|GBRA2_MOUSE Gamma-aminobutyric acid receptor subunit alpha-2 OS=Mus musculus
GN=Gabra2 PE=1 SV=1
Length = 451
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 67/235 (28%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +RI G++LY++ L +C +H L FP +
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMH---------------LEDFPMDAH-------- 178
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEG 176
SCP LK SY +TT ++ ++W
Sbjct: 179 ---------------------SCP--------------LKFGSYAYTTSEVTYIWTYNAS 203
Query: 177 DPVQVVKN-LHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
D VQV + L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 416 KIDRMSRIVFPVLFGTFNLVYWAT 439
>sp|P23576|GBRA2_RAT Gamma-aminobutyric acid receptor subunit alpha-2 OS=Rattus
norvegicus GN=Gabra2 PE=2 SV=1
Length = 451
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 67/235 (28%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNSMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +RI G++LY++ L +C +H L FP +
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMH---------------LEDFPMDAH-------- 178
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEG 176
SCP LK SY +TT ++ ++W
Sbjct: 179 ---------------------SCP--------------LKFGSYAYTTSEVTYIWTYNPS 203
Query: 177 DPVQVVKN-LHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
D VQV + L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 416 KIDRMSRIVFPVLFGTFNLVYWAT 439
>sp|P24046|GBRR1_HUMAN Gamma-aminobutyric acid receptor subunit rho-1 OS=Homo sapiens
GN=GABRR1 PE=2 SV=2
Length = 479
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 75/240 (31%)
Query: 1 EYSVQLTFREQWLDERLKYND-------YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFH 53
++++ L R W DERL + +DGR+ ++W+PD+FF + K H
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRL-------VKKIWVPDMFFVHSKRSFIH 169
Query: 54 NIIMPNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRID 113
+ NV +R+ P G VLYS+ V +T C ++FP
Sbjct: 170 DTTTDNVMLRVQPDGKVLYSL---------RVTVTA-------MCNMDFSRFP------- 206
Query: 114 VISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW 173
LD Q+CSL++ SY +T DDL+ W
Sbjct: 207 ------------------------------------LDTQTCSLEIESYAYTEDDLMLYW 230
Query: 174 KEG-DPVQVVKNLHLPRFTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
K+G D ++ + + L +F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 231 KKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 290
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ RS + ID SRI FP + LFNL YWS S
Sbjct: 435 SPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 479
>sp|P50572|GBRR1_RAT Gamma-aminobutyric acid receptor subunit rho-1 OS=Rattus norvegicus
GN=Gabrr1 PE=1 SV=2
Length = 480
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 75/240 (31%)
Query: 1 EYSVQLTFREQWLDERLKYND-------YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFH 53
++++ L R W DERL + +DGR+ ++W+PD+FF + K H
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRL-------VKKIWVPDMFFVHSKRSFIH 170
Query: 54 NIIMPNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRID 113
+ NV +R+ P G VLYS+ V +T C ++FP
Sbjct: 171 DTTTDNVMLRVQPDGKVLYSL---------RVTVTA-------MCNMDFSRFP------- 207
Query: 114 VISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW 173
LD Q+CSL++ SY +T DDL+ W
Sbjct: 208 ------------------------------------LDTQTCSLEIESYAYTEDDLMLYW 231
Query: 174 KEG-DPVQVVKNLHLPRFTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
K+G D ++ + + L +F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 232 KKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 291
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ R + ID SRI FP + LFNL YWS S
Sbjct: 436 SPQRKSQRGSYVSMRINTHAIDKYSRIIFPAAYILFNLIYWSIFS 480
>sp|P56475|GBRR1_MOUSE Gamma-aminobutyric acid receptor subunit rho-1 OS=Mus musculus
GN=Gabrr1 PE=2 SV=2
Length = 480
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 75/240 (31%)
Query: 1 EYSVQLTFREQWLDERLKYND-------YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFH 53
++++ L R W DERL + +DGR+ ++W+PD+FF + K H
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSSNNLSMTFDGRL-------VKKIWVPDMFFVHSKRSFIH 170
Query: 54 NIIMPNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRID 113
+ NV +R+ P G VLYS+ V +T C ++FP
Sbjct: 171 DTTTDNVMLRVQPDGKVLYSL---------RVTVTA-------MCNMDFSRFP------- 207
Query: 114 VISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW 173
LD Q+CSL++ SY +T DDL+ W
Sbjct: 208 ------------------------------------LDTQTCSLEIESYAYTEDDLMLYW 231
Query: 174 KEG-DPVQVVKNLHLPRFTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
K+G D ++ + + L +F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 232 KKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 291
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ R + ID SRI FP + LFNL YWS S
Sbjct: 436 SPQRKGQRGSYVSMRINTHAIDKYSRIIFPAAYILFNLIYWSIFS 480
>sp|P28472|GBRB3_HUMAN Gamma-aminobutyric acid receptor subunit beta-3 OS=Homo sapiens
GN=GABRB3 PE=1 SV=1
Length = 473
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP F+LFNL YW
Sbjct: 448 IDRWSRIVFPFTFSLFNLVYW 468
>sp|P63079|GBRB3_RAT Gamma-aminobutyric acid receptor subunit beta-3 OS=Rattus
norvegicus GN=Gabrb3 PE=1 SV=1
Length = 473
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 107 TRSKRIDVISRITFPLVFALFNLTYW 132
T ID SRI FP F+LFNL YW
Sbjct: 443 TDVNAIDRWSRIVFPFTFSLFNLVYW 468
>sp|P63080|GBRB3_MOUSE Gamma-aminobutyric acid receptor subunit beta-3 OS=Mus musculus
GN=Gabrb3 PE=2 SV=1
Length = 473
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 107 TRSKRIDVISRITFPLVFALFNLTYW 132
T ID SRI FP F+LFNL YW
Sbjct: 443 TDVNAIDRWSRIVFPFTFSLFNLVYW 468
>sp|O18276|GBRB_CAEEL Gamma-aminobutyric acid receptor subunit beta OS=Caenorhabditis
elegans GN=gab-1 PE=2 SV=3
Length = 550
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSK--RIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLK 146
VP T N S+L + R+K RI+V ++ + + ++ TLSC MNL+
Sbjct: 137 VPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGM-----------RLTSTLSCSMNLR 185
Query: 147 LYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEKFYTDYCNSKTNT 206
+PLD Q+C++++ SYG+TT +++ W V V+ +P+FT+ F+T+ T T
Sbjct: 186 NFPLDSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTAT 245
Query: 207 GAYSCLKVDLLFKREFSYYLIQIY 230
G+Y L + +R Y++ Q Y
Sbjct: 246 GSYQRLSLVFQLRRSVGYFIFQTY 269
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
ID SR+ FP+ F +FNL YWS
Sbjct: 522 IDKYSRVVFPVCFIVFNLFYWS 543
>sp|Q9JLF1|GBRT_MOUSE Gamma-aminobutyric acid receptor subunit theta OS=Mus musculus
GN=Gabrq PE=2 SV=1
Length = 638
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 60/231 (25%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + + W D RL Y + + + L ++W+PD +F N K+ H++ + N
Sbjct: 103 DYTITMFLHQTWKDTRLAYYETNLNLT-LDYRMHEKLWVPDCYFVNSKDAFVHDVTVENR 161
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF 120
++HP G+V Y I + C L KFP
Sbjct: 162 VFQLHPDGTVRYGI----------------RLTTTAACSLDLQKFP-------------- 191
Query: 121 PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ 180
+D+QSC L++ SYG+T +D++ W++ + +
Sbjct: 192 -----------------------------MDKQSCKLEVESYGYTVEDIVLSWEDDNAIH 222
Query: 181 VVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
+ LH+P++T TG+Y L V +RE YL+Q+Y+
Sbjct: 223 ITDGLHIPQYTYLGRTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYW 273
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYW 132
P R ++D SR FPL F LFN+ YW
Sbjct: 607 PNRVPKVDRWSRFLFPLSFGLFNVVYW 633
>sp|Q9UN88|GBRT_HUMAN Gamma-aminobutyric acid receptor subunit theta OS=Homo sapiens
GN=GABRQ PE=2 SV=2
Length = 632
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 71/237 (29%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLT--EASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F + W D RL Y Y+ + LTL ++W+PD +F N K+ H++ +
Sbjct: 103 DYTITMFFHQTWKDSRLAY--YETTLN-LTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVE 159
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N ++HP G+V Y I + C L KFP
Sbjct: 160 NRVFQLHPDGTVRYGI----------------RLTTTAACSLDLHKFP------------ 191
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKE-GD 177
+D+Q+C+L + SYG+T +D+I W + G+
Sbjct: 192 -------------------------------MDKQACNLVVESYGYTVEDIILFWDDNGN 220
Query: 178 PVQVVKNLHLPRFTLEKFYTDYCNSKTN---TGAYSCLKVDLLFKREFSYYLIQIYY 231
+ + + LH+P+FT F SK TG+Y L + +RE + YL+Q+Y+
Sbjct: 221 AIHMTEELHIPQFT---FLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYW 274
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYW 132
P ++D SR FPL F LFN+ YW
Sbjct: 601 PDYVPKVDKWSRFLFPLAFGLFNIVYW 627
>sp|Q24352|GBRAL_DROME Gamma-aminobutyric acid receptor alpha-like OS=Drosophila
melanogaster GN=Grd PE=1 SV=1
Length = 686
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 61/192 (31%)
Query: 2 YSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVY 61
YS+ FR+ W+D+RL + + L+++ +R+W PD +F N K+ + H I PN +
Sbjct: 154 YSMDCYFRQSWVDKRLAFEGAQDTLA-LSVSMLARIWKPDTYFYNGKQSYLHTITTPNKF 212
Query: 62 IRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFP 121
+RI+ G VLYS +T+ K C LA FP
Sbjct: 213 VRIYQNGRVLYS-----------SRLTI-----KAGCPMNLADFP--------------- 241
Query: 122 LVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW-KEGDPVQ 180
+D Q C LK S+G+TT D+I+ W KE PV
Sbjct: 242 ----------------------------MDIQKCPLKFGSFGYTTSDVIYRWNKERPPVA 273
Query: 181 VVKNLHLPRFTL 192
+ +++ L +F L
Sbjct: 274 IAEDMKLSQFDL 285
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
+ID SRI FPL+F L N+ YW
Sbjct: 646 KIDRASRIVFPLLFILINVFYW 667
>sp|P50571|GBRB1_MOUSE Gamma-aminobutyric acid receptor subunit beta-1 OS=Mus musculus
GN=Gabrb1 PE=1 SV=1
Length = 474
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 30.8 bits (68), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 107 TRSKRIDVISRITFPLVFALFNLTYW 132
T ID SR+ FP+ F+LFN+ YW
Sbjct: 444 TDVNSIDKWSRMFFPITFSLFNVVYW 469
>sp|P15431|GBRB1_RAT Gamma-aminobutyric acid receptor subunit beta-1 OS=Rattus
norvegicus GN=Gabrb1 PE=2 SV=1
Length = 474
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 107 TRSKRIDVISRITFPLVFALFNLTYW 132
T ID SR+ FP+ F+LFN+ YW
Sbjct: 444 TDVNSIDKWSRMFFPITFSLFNVVYW 469
>sp|P08220|GBRB1_BOVIN Gamma-aminobutyric acid receptor subunit beta-1 OS=Bos taurus
GN=GABRB1 PE=2 SV=1
Length = 474
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 107 TRSKRIDVISRITFPLVFALFNLTYW 132
T ID SR+ FP+ F+LFN+ YW
Sbjct: 444 TDVNSIDKWSRMFFPITFSLFNVVYW 469
>sp|P18505|GBRB1_HUMAN Gamma-aminobutyric acid receptor subunit beta-1 OS=Homo sapiens
GN=GABRB1 PE=2 SV=2
Length = 474
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 107 TRSKRIDVISRITFPLVFALFNLTYW 132
T ID SR+ FP+ F+LFN+ YW
Sbjct: 444 TDVNSIDKWSRMFFPITFSLFNVVYW 469
>sp|Q08832|GBRB3_DROME Gamma-aminobutyric acid receptor subunit beta-like OS=Drosophila
melanogaster GN=Lcch3 PE=1 SV=2
Length = 496
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLP 188
+TY + TL+C M+L YPLD Q+C++++ SYG+T D++ WK PV+ V++ LP
Sbjct: 164 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP-TPVRGVEDAELP 222
Query: 189 RFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+FT+ + T+ + TG Y L + +R Y++ Q Y
Sbjct: 223 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTY 264
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 1 EYSVQLTFREQWLDERLKYNDY---------DGRIKYLTLTE--ASRVWMPDLFFSNEKE 49
+Y++ + + W DERL +N + DG LTL+ A ++W+PD FF+N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKN 143
Query: 50 GHFHNIIMPNVYIRIHPQGSVLYSI 74
H++ N +R+ G+V Y +
Sbjct: 144 SFLHDVTERNKLVRLGGDGAVTYGM 168
>sp|P24045|GBRB4_CHICK Gamma-aminobutyric acid receptor subunit beta-4 OS=Gallus gallus
GN=GABRB4 PE=2 SV=1
Length = 488
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 73/237 (30%)
Query: 1 EYSVQLTFREQWLDERLKYNDY------DGRIKYLTLTEASRVWMPDLFFSNEKEGHFHN 54
+Y++ + F++ W D+RL YND D R+ A ++W+PD +F N+K+ H
Sbjct: 80 DYTITMYFQQSWRDKRLAYNDLPLNLTLDNRV-------ADQLWLPDTYFLNDKKSFLHG 132
Query: 55 IIMPNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDV 114
+ + N IR+HP G+VLY + + C L ++P +
Sbjct: 133 VTVKNRMIRLHPDGTVLYGL----------------RITTTAACMMDLRRYPLDQQ---- 172
Query: 115 ISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWK 174
+C + ++ Y G+T DD++F W+
Sbjct: 173 -------------------------NCTLEIESY--------------GYTVDDIVFFWQ 193
Query: 175 EGD-PVQVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
D V ++ L LP+FT+ + TG+Y L + KR Y+++Q Y
Sbjct: 194 GNDSAVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTY 250
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+ F FNL YW
Sbjct: 463 IDKWSRIIFPITFGFFNLVYW 483
>sp|P34903|GBRA3_HUMAN Gamma-aminobutyric acid receptor subunit alpha-3 OS=Homo sapiens
GN=GABRA3 PE=2 SV=1
Length = 492
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 67/235 (28%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 111 EYTIDVFFRQTWHDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 167
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRI 118
N +R+ G++LY++ L +C +H L FP +DV
Sbjct: 168 NKLLRLVDNGTLLYTMR-LTIHAECPMH---------------LEDFP-----MDV---- 202
Query: 119 TFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-- 176
+CP LK SY +TT ++++ W G
Sbjct: 203 --------------------HACP--------------LKFGSYAYTTAEVVYSWTLGKN 228
Query: 177 DPVQVVKN-LHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V+V ++ L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 229 KSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTY 283
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 6/41 (14%)
Query: 100 SWLAKFPTRSK------RIDVISRITFPLVFALFNLTYWST 134
+++ PT +K ++D ISRI FP++FA+FNL YW+T
Sbjct: 437 TYVQDSPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWAT 477
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,452,456
Number of Sequences: 539616
Number of extensions: 3452201
Number of successful extensions: 9105
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 8518
Number of HSP's gapped (non-prelim): 467
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)