Query psy1864
Match_columns 232
No_of_seqs 111 out of 1182
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 18:17:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rhw_A Avermectin-sensitive gl 100.0 6.4E-38 2.2E-42 284.4 11.6 172 1-231 48-222 (347)
2 2qc1_B Acetylcholine receptor 100.0 2.4E-35 8.4E-40 252.1 16.0 156 1-222 50-212 (212)
3 3tlw_A GLR4197 protein, GLIC; 100.0 3.3E-35 1.1E-39 263.7 12.7 162 1-230 40-206 (321)
4 2wn9_A Soluble acetylcholine r 100.0 1.7E-34 5.8E-39 250.2 14.9 160 1-232 58-227 (228)
5 3sq6_A ACHBP, neuronal acetylc 100.0 4.3E-34 1.5E-38 244.0 16.6 151 1-221 47-203 (204)
6 2bg9_C Acetylcholine receptor 100.0 9.2E-35 3.2E-39 267.0 9.5 164 1-231 51-219 (369)
7 2bg9_A Acetylcholine receptor 100.0 8.2E-35 2.8E-39 267.1 8.4 166 1-231 49-220 (370)
8 4aoe_A Acetylcholine-binding p 100.0 3E-33 1E-37 240.7 16.1 152 1-220 49-204 (205)
9 2bg9_B Acetylcholine receptor 100.0 9.4E-35 3.2E-39 267.0 6.1 162 1-230 49-216 (370)
10 2bg9_E Acetylcholine receptor 100.0 7.4E-35 2.5E-39 267.4 5.2 165 1-231 48-220 (370)
11 4aod_A Acetylcholine-binding p 100.0 5E-33 1.7E-37 238.9 16.1 152 1-220 49-204 (205)
12 3igq_A GLR4197 protein; plgic 100.0 3E-33 1E-37 239.1 14.6 155 1-224 36-196 (201)
13 4afh_A ACHBP; acetylcholine-bi 100.0 3.5E-33 1.2E-37 243.5 14.4 156 1-228 58-220 (230)
14 1uw6_A Acetylcholine-binding p 100.0 1.7E-32 5.8E-37 234.3 16.8 153 1-227 48-211 (211)
15 4aq5_A Acetylcholine receptor 100.0 1.6E-33 5.5E-38 267.0 8.4 166 1-231 73-244 (461)
16 2bj0_A Acetylcholine-binding p 100.0 4.1E-32 1.4E-36 230.7 16.1 150 1-221 45-203 (203)
17 4aq5_C Acetylcholine receptor 100.0 3.1E-33 1.1E-37 268.6 8.7 166 1-231 72-255 (522)
18 3rqw_A ELIC pentameric ligand 100.0 7.8E-33 2.7E-37 248.4 8.2 163 1-230 32-209 (322)
19 4aq5_E Acetylcholine receptor 100.0 1.3E-33 4.5E-38 269.1 3.2 166 1-231 48-227 (488)
20 4aq5_B Acetylcholine receptor 100.0 7.2E-33 2.5E-37 264.3 0.1 163 1-231 73-250 (493)
21 3rhw_A Avermectin-sensitive gl 84.1 0.015 5.2E-07 52.1 -7.4 32 107-138 310-341 (347)
22 2lkg_A Acetylcholine receptor; 80.3 0.0011 3.7E-08 53.9 -14.8 26 205-230 32-57 (140)
No 1
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=100.00 E-value=6.4e-38 Score=284.44 Aligned_cols=172 Identities=53% Similarity=0.973 Sum_probs=157.9
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++|+|.|+||+|||++ |+++.+++.+.++||+||++++|++++.++....++..++|++||+|.+..+
T Consensus 48 ~~t~~~~l~~~W~D~rL~w~p~~~~~~~~l~~~~~~~IW~PDi~l~N~~~~~~~~~~~~n~~v~i~~~G~V~~~~~---- 123 (347)
T 3rhw_A 48 EYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVR---- 123 (347)
T ss_dssp EEEEEEEEEEEEECGGGCSSTTCSSSCSEEECCTTCCCCCCCEECTTEEEEEECCSSSCSEEEEEETTSEEEEEEE----
T ss_pred eEEEEEEEeeEEECcccCCCCccCCCceEEEecchhceecCCEeeeccccccccccccccEEEEEeCCCCEEEecc----
Confidence 48999999999999999999999 9999998744899999999999999988887777889999999999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+..+++|+||+++||||+|.|+|+|
T Consensus 124 -------------------------------------------------------~~~~s~C~~dl~~FPfD~Q~C~l~f 148 (347)
T 3rhw_A 124 -------------------------------------------------------ISLVLSCPMYLQYYPMDVQQCSIDL 148 (347)
T ss_dssp -------------------------------------------------------EEEEEECCCCCTTGGGCEEEEEEEE
T ss_pred -------------------------------------------------------eEEEEEeeeeeccCCCcceeEEEEe
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCCCeeeec--cEEeCcEEEEEEEEEeeecCCCCCceEEEEEEEEEEecccceEEEEEE
Q psy1864 160 ASYGWTTDDLIFLWKEGDPVQVVK--NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~ys~l~~~l~lkR~~~yYli~i~~ 231 (232)
+||+|+.+++.+.|.+++++...+ +|.+++|.+.+.....|....++|.|+++++.+++||+++||++|+|+
T Consensus 149 ~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~y~~l~~~~~l~R~~~~y~~~l~i 222 (347)
T 3rhw_A 149 ASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYI 222 (347)
T ss_dssp EESSCCTTTEEEEECSSCSEEECTTSGGGCCSEEEEEEEEEECCEECSSCEECEEEEEEEEEECSHHHHHHTHH
T ss_pred ccCcCChhhEEEEecCCCceeecCcceeEccceEEeeEEeeEeeeeecccceeEEEEEEEEEEEeeEEEEEeeh
Confidence 999999999999998877777666 688899999888877787777889999999999999999999988753
No 2
>2qc1_B Acetylcholine receptor subunit alpha; nicotinic acetylcholine receptor, glycosylated protein, beta sandwich, Cys-loop, buried hydrophilic residues; HET: NAG MAN; 1.94A {Mus musculus} PDB: 1l4w_B 1ljz_B
Probab=100.00 E-value=2.4e-35 Score=252.07 Aligned_cols=156 Identities=19% Similarity=0.417 Sum_probs=135.3
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++.... ..++|+++|+|.++.+
T Consensus 50 ~~~~~~~~~~~W~D~rL~w~~~~~~~i~~l~~~-~~~iW~PDi~~~N~~~~~~~~~~~--~~~~v~~~G~V~~~~~---- 122 (212)
T 2qc1_B 50 IVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIP-SEKIWRPDVVLYNNADGDFAIVKF--TKVLLDYTGHITWTPP---- 122 (212)
T ss_dssp EEEEEEEEEEEEECTTCCCCGGGGTTCCEEEEC-GGGSCCCCEEECCBTTTSSCEECC--CCEEEETTCEEEECCE----
T ss_pred EEEEEEEEeeEEECCCcccChhhcCCeeEEEcc-hhhccCCceeccccccccccccce--eeEEEECCeeEEEEee----
Confidence 47899999999999999999999 999999998 999999999999999988776544 4577899999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+.++++|+|++++||||+|.|+|+|
T Consensus 123 -------------------------------------------------------~~~~~~C~mdl~~FPfD~Q~C~l~f 147 (212)
T 2qc1_B 123 -------------------------------------------------------AIFKSYCEIIVTHFPFDEQNCSMKL 147 (212)
T ss_dssp -------------------------------------------------------EEEEEEEEECCSSSSCCEEEEEEEE
T ss_pred -------------------------------------------------------eEEEEEccceeecCCCCceEEeEEE
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCCCeee-----eccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEecc
Q psy1864 160 ASYGWTTDDLIFLWKEGDPVQV-----VKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKREF 222 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~~ 222 (232)
+||+|+.+++.+.|..+. +.. ..+|++.++++.+....| ||+ +|.|++++++|+|||+|
T Consensus 148 ~S~~y~~~~v~l~~~~~~-~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~---~~~y~~i~~~~~l~R~p 212 (212)
T 2qc1_B 148 GTRTYDGSAVAINPESDQ-PDLSNFMESGEWVIKEARGWKHWVFYSCCP---TTPYLDITYHFVMQRLP 212 (212)
T ss_dssp EESSCCTTTEEEEESCSS-CBCTTCCCCSSEEEEEEEEEEEEEEETTCS---SCCEEEEEEEEEEEECC
T ss_pred EcccccCceEEEEecccc-cchhhCccCCCEEEEEeEEEEEEEecCCCC---CCCeeEEEEEEEEEECc
Confidence 999999999999998642 222 346888777776554444 443 26999999999999996
No 3
>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...
Probab=100.00 E-value=3.3e-35 Score=263.71 Aligned_cols=162 Identities=20% Similarity=0.362 Sum_probs=137.0
Q ss_pred CeEEEEEEEeEEEccCceecCCCCCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEecccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDNM 80 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~~ 80 (232)
+|++++|++++|.|+||+|||++.+++.+.++ .++||+||++++|++++. ...+..++|++||+|.+..+
T Consensus 40 ~~t~~~~l~~~W~D~rL~w~~~~~~i~~~~~~-~~~IW~PDi~l~N~~~~~----~~~~~~~~v~~~G~V~~~~~----- 109 (321)
T 3tlw_A 40 TFKVNAFLSLSWKDRRLAFDPVRSGVRVKTYE-PEAIWIPEIRFVNVENAR----DADVVDISVSPDGTVQYLER----- 109 (321)
T ss_dssp EEEEEEEEEEEEECGGGCCCSTTTCCSSEECC-GGGSCCCCEEESSBSSCC----EEEEEEEEECTTCEEEEEEE-----
T ss_pred EEEEEEEEeeEEECcccCCCCccCCeeeeccc-ccCeEcCcEEeecccccc----cccceeEEEeCCccEEEecc-----
Confidence 48999999999999999999999339999998 999999999999998877 35567888999999999999
Q ss_pred ccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEEe
Q psy1864 81 RQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMA 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~~ 160 (232)
+..+++|+||+++||||+|.|+++|+
T Consensus 110 ------------------------------------------------------~~~~~~C~~dl~~FPfD~Q~C~l~f~ 135 (321)
T 3tlw_A 110 ------------------------------------------------------FSARVLSPLDFRRYPFDSQTLHIYLI 135 (321)
T ss_dssp ------------------------------------------------------EEEEEECCCCCTTTTSCEEEEEEEEE
T ss_pred ------------------------------------------------------eEEEEEEEeecccCCCCceeEeEEEe
Confidence 99999999999999999999999999
Q ss_pred eeccCcceEEEEecCCCCeeeec-----cEEeCcEEEEEEEEEeeecCCCCCceEEEEEEEEEEecccceEEEEE
Q psy1864 161 SYGWTTDDLIFLWKEGDPVQVVK-----NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230 (232)
Q Consensus 161 S~~~~~~~l~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~ys~l~~~l~lkR~~~yYli~i~ 230 (232)
||+|+.+++.+.|.. +++...+ +|++.+.+..+....+.+ .+|.|+++++++++||+++||++|+|
T Consensus 136 S~~y~~~~v~l~~~~-~~~~~~~~~~~~ew~l~~~~~~~~~~~~~~---~~~~y~~l~~~~~l~R~~~~y~~~~~ 206 (321)
T 3tlw_A 136 VRSVDTRNIVLAVDL-EKVGKNDDVFLTGWDIESFTAVVKPANFAL---EDRLESKLDYQLRISRQYFSYIPNII 206 (321)
T ss_dssp EECCSSCCEEEEECG-GGCEECTTCCBTTEEEEEEEEEEEEEEEEE---TTEEEEEEEEEEEEEECCTTHHHHTH
T ss_pred cccCChhhEEEEEcC-CcccccccccccceEEEeeEeEEeeEEecC---CCCceeEEEEEEEEEEeeceeehhHH
Confidence 999999999999985 4455444 455554444333222321 24799999999999999999998875
No 4
>2wn9_A Soluble acetylcholine receptor; 4-0H-DMXBA, acetylcholine binding protein; HET: ZY5 NAG BMA MAN; 1.75A {Aplysia californica} PDB: 2wnj_A* 2wzy_A* 2x00_A* 3peo_A* 2pgz_A* 2ph9_A* 4dbm_A* 3c84_A* 2byq_A* 2byr_A* 2bys_A* 2wnc_A* 2wnl_A* 3c79_A* 2byn_A* 3pmz_A* 2x00_D* 2xnv_A* 2xnt_A* 2xnu_A* ...
Probab=100.00 E-value=1.7e-34 Score=250.24 Aligned_cols=160 Identities=14% Similarity=0.264 Sum_probs=132.6
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++.. +..++|+++|+|.++.+
T Consensus 58 ~~~~~~~l~~~W~D~rL~w~~~~y~~i~~l~~~-~~~IW~PDi~l~N~~~~~~~~~---~~~v~i~~~G~V~~~~~---- 129 (228)
T 2wn9_A 58 EVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTS-AADIWTPDITAYSSTRPVQVLS---PQIAVVTHDGSVMFIPA---- 129 (228)
T ss_dssp EEEEEEEEEEEEEEEEEECCGGGGTTCCEEEEE-GGGSCCCCEEESSBSSCCEECS---CCEEEEETEEEEEECCE----
T ss_pred EEEEEEEEEEEEECCCccCCchhcCCeeEEEec-HHHccCCceecccccccccccc---cceEEEeCCeEEEEeCC----
Confidence 47899999999999999999999 999999998 9999999999999999887663 77888999999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccc---cccccCcccceeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCP---MNLKLYPLDRQSCS 156 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~---m~l~~fPfD~Q~C~ 156 (232)
+.++++|+ |+++ |+|.|+
T Consensus 130 -------------------------------------------------------~~~~~~C~~~~mdl~----D~Q~C~ 150 (228)
T 2wn9_A 130 -------------------------------------------------------QRLSFMCDPTGVDSE----EGATCA 150 (228)
T ss_dssp -------------------------------------------------------EEEEEECCCTTTTST----TCEEEE
T ss_pred -------------------------------------------------------EEEEEECCCCCCCCC----cCcEee
Confidence 99999999 9999 999999
Q ss_pred eEEeeeccCcceEEEEecCCCCee-----eeccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEecccceEEEEE
Q psy1864 157 LKMASYGWTTDDLIFLWKEGDPVQ-----VVKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230 (232)
Q Consensus 157 l~~~S~~~~~~~l~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~~~yYli~i~ 230 (232)
|+|+||+|+.+++.+.|..+ .+. ...+|++.++++.+....| ||+ |.|++++++|+|||+++||++|++
T Consensus 151 l~f~Sw~y~~~~i~l~~~~~-~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~----~~y~~l~~~~~l~R~~~fYii~li 225 (228)
T 2wn9_A 151 VKFGSWVYSGFEIDLKTDTD-QVDLSSYYASSKYEILSATQTRQVQHYSCCP----EPYIDVNLVVKFRERRAGNGFFRN 225 (228)
T ss_dssp EEEEESSCCTTTEEEECSCS-BCBCTTCCTTCSEEEEEEEEEEEEECCSSCS----SCEEEEEEEEEEEECC--------
T ss_pred EEEEeecccccEEEEEecCC-ccchhhceecCCEEEEEEEEEEEEEeecCCC----CCeeEEEEEEEEEEeccceEEEEE
Confidence 99999999999999999764 222 2346888888776655544 554 699999999999999999999997
Q ss_pred EC
Q psy1864 231 YY 232 (232)
Q Consensus 231 ~~ 232 (232)
+.
T Consensus 226 l~ 227 (228)
T 2wn9_A 226 LF 227 (228)
T ss_dssp --
T ss_pred Ee
Confidence 63
No 5
>3sq6_A ACHBP, neuronal acetylcholine receptor subunit alpha-7, acetylcholine-binding protein; nicotinic receptor; HET: EPJ NAG; 2.80A {Homo sapiens} SCOP: b.96.1.1 PDB: 3sq9_A*
Probab=100.00 E-value=4.3e-34 Score=243.98 Aligned_cols=151 Identities=21% Similarity=0.349 Sum_probs=133.6
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeecccc--CcceeeeecceEEEEcCCceEEEEeccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKE--GHFHNIIMPNVYIRIHPQGSVLYSISDL 77 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~--~~~~~~~~~~~~i~I~~~G~V~~s~~~~ 77 (232)
+|++++|++++|.|+||+|||++ ||++.+.++ .++||+||++++|+++ +.++.. .++|+++|+|.+..+
T Consensus 47 ~~t~~~~~~~~W~D~rL~w~~~~~~~i~~i~~~-~~~iW~PDi~~~N~~~~~~~~~~~-----~v~v~~~G~V~~~~~-- 118 (204)
T 3sq6_A 47 VVDVVFWLQMSWTDHYLQWNVSEYPGVKQVSVP-ISSLWVPDLAAYNAISKPEVLTPQ-----LALVNSSGHVQYLPS-- 118 (204)
T ss_dssp EEEEEEEEEEEEECGGGCCCTTTSSSCCEEEEE-GGGSCCCCEEETTBSSCCEECSCC-----EEEEETTSEEEECCE--
T ss_pred EEEEEEeeeeEEECCCcccChHHcCCccEEEcC-HHHCcCCCEEeEcccccCCccccc-----EEEEEeCCEEEEecC--
Confidence 47899999999999999999999 999999998 9999999999999988 555432 778899999999999
Q ss_pred cccccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEe
Q psy1864 78 DNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSL 157 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l 157 (232)
+.++++|+|++ .||||+|.|+|
T Consensus 119 ---------------------------------------------------------~~~~~~C~mdl-~fPfD~Q~C~l 140 (204)
T 3sq6_A 119 ---------------------------------------------------------IRQRFSCDVSG-VDTESGATCKL 140 (204)
T ss_dssp ---------------------------------------------------------EEEEEECCCGG-GSSSSCEEEEE
T ss_pred ---------------------------------------------------------eeEEEeccccc-cCCCCCcEEEE
Confidence 99999999999 99999999999
Q ss_pred EEeeeccCcceEEEEecCCCCeee--eccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEec
Q psy1864 158 KMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKRE 221 (232)
Q Consensus 158 ~~~S~~~~~~~l~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~ 221 (232)
+|+||+|+.+++.+.+...+...+ ..+|++.+.++.+....| ||+ |+|+.++++|+||||
T Consensus 141 ~f~S~~y~~~~v~l~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~c~----~~y~~i~~~~~lrRr 203 (204)
T 3sq6_A 141 KFGSWTHHSRELDLQMQEADISGYIPYSRFELVGVTQKRSERFYECCK----EPYPDVTFTVTFRKK 203 (204)
T ss_dssp EEEESSCCTTTEEEECCCCCCTTSCSSSSEEEEEEEEEEEEEECSSSS----SEEEEEEEEEEEEEC
T ss_pred EEEeecccCeEEEEEeccCCHHHcccCCCEEEEEeEEEEEEEeeCCCC----CCcceEEEEEEEEEC
Confidence 999999999999999876554333 457999999887766655 665 589999999999997
No 6
>2bg9_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=9.2e-35 Score=266.97 Aligned_cols=164 Identities=23% Similarity=0.465 Sum_probs=140.5
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++....+++ .|++||+|.++.+
T Consensus 51 ~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~-~~~IW~PDi~~~N~~~~~~~~~~~~~~--~i~~~G~V~~~~~---- 123 (369)
T 2bg9_C 51 TLTTNVWMDHAWYDHRLTWNASEYSDISILRLR-PELIWIPDIVLQNNNDGQYNVAYFCNV--LVRPNGYVTWLPP---- 123 (369)
T ss_dssp EEEEEEEEEEEEECTTTCCCCCCCCTCSCEEEC-GGGSCCCCEEETTTCSSCCBSSSSCCE--EECSSSEEEECCE----
T ss_pred ceEEEEEEeeeeECCCcccCccccCCeeEEEec-HHhccCCcEeccccccccccccccccE--EEECCccEEEecC----
Confidence 48999999999999999999999 999999998 999999999999999988776555554 5799999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+..+++|+||+++||||+|.|+++|
T Consensus 124 -------------------------------------------------------~~~~~~C~mdl~~FPfD~Q~C~l~f 148 (369)
T 2bg9_C 124 -------------------------------------------------------AIFRSSCPINVLYFPFDWQNCSLKF 148 (369)
T ss_dssp -------------------------------------------------------EEEEECCSCGGGSSSTTCCEEEEEE
T ss_pred -------------------------------------------------------EEEEEECcCcccCCCCCceEeeEEE
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCCCeee--eccEEeCcEEEEEEEEE-e-eecCCCCCceEEEEEEEEEEecccceEEEEEE
Q psy1864 160 ASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTD-Y-CNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~-~-~~~~~~~~~ys~l~~~l~lkR~~~yYli~i~~ 231 (232)
+||+|+.+++.+.| ..+..++ ..+|++.+.+..+.... | |+ +|.|++++++++|||+++||++|+|+
T Consensus 149 ~S~~y~~~~i~l~~-~~~~~~~~~~~ew~l~~~~~~~~~~~~y~~~----~~~y~~l~~~~~l~R~~~~y~~~~~i 219 (369)
T 2bg9_C 149 TALNYNANEISMDL-IIDPEAFTENGEWEIIHKPAKKNIYGDKFPN----GTNYQDVTFYLIIRRKPLFYVINFIT 219 (369)
T ss_dssp EESSCCTTTCEEEC-CCGGGSCCTTSSEEEEECCEEEEECCCSSCS----SCCCEEEEEEEEEEECCSSHHHHHHH
T ss_pred EEecccCceEEEEE-ecccccceeCCEEEEeeeeEEEEEEecCCCC----CCCccEEEEEEEEEEccceeEEEEcc
Confidence 99999999999998 3333333 34688777665544332 2 33 46999999999999999999988753
No 7
>2bg9_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=8.2e-35 Score=267.07 Aligned_cols=166 Identities=20% Similarity=0.461 Sum_probs=141.6
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++... +..++|++||+|.++.+
T Consensus 49 ~~~~~~~l~~~W~D~rL~w~p~~~~~i~~l~v~-~~~IW~PDi~~~N~~~~~~~~~~--~~~~~i~~~G~V~~~~~---- 121 (370)
T 2bg9_A 49 IVETNVRLRQQWIDVRLRWNPADYGGIKKIRLP-SDDVWLPDLVLYNNADGDFAIVH--MTKLLLDYTGKIMWTPP---- 121 (370)
T ss_dssp EEEEEEEEEEEECCTTSCCCTTTHHHHSSEEEE-GGGSCCCCEEETTCCCSCEESCS--SCEEEECSSCCEEECCE----
T ss_pred ceEEEEEEeeeeECCCccCChhhcCCccEEEec-hhhccCCcEeccccccccccccc--cceEEEECCeeEEEecc----
Confidence 48999999999999999999999 999999998 99999999999999988877643 45678899999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+..+++|+||+++||||+|.|+++|
T Consensus 122 -------------------------------------------------------~~~~~~C~mdl~~FPfD~Q~C~l~f 146 (370)
T 2bg9_A 122 -------------------------------------------------------AIFKSYCEIIVTHFPFDQQNCTMKL 146 (370)
T ss_dssp -------------------------------------------------------EEEEEECCCCTTSSSSSCEEEEEEE
T ss_pred -------------------------------------------------------eEEEEECCCCcCCCCCCcceeeEEE
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCC--Cee--eeccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEecccceEEEEEE
Q psy1864 160 ASYGWTTDDLIFLWKEGD--PVQ--VVKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~--~~~--~~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~~~yYli~i~~ 231 (232)
+||+|+.+++.+.|..+. ..+ ...+|++.+.+..+....| |++ +|.|+++++++++||+++||++|+|+
T Consensus 147 ~S~~y~~~~v~l~~~~~~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~---~~~y~~l~~~~~l~R~~~~y~~~~~i 220 (370)
T 2bg9_A 147 GIWTYDGTKVSISPESDRPDLSTFMESGEWVMKDYRGWKHWVYYTCCP---DTPYLDITYHFIMQRIPLYFVVNVII 220 (370)
T ss_dssp EESSCCTTTEEEECCCCCCSTTSCCTTCSSEEEEEEEEEEECCCSSSS---SCCCEEEEEEEEEECCCTHHHHHHHH
T ss_pred EEecccCcEEEEEecCCCcccccccccceEEEEcceEEEEEEecCCCC---CCCeeEEEEEEEEEEccchhhhhhhh
Confidence 999999999999987642 111 2346888777665543333 443 36899999999999999999988753
No 8
>4aoe_A Acetylcholine-binding protein type 2; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholin receptor; 5.80A {Biomphalaria glabrata}
Probab=100.00 E-value=3e-33 Score=240.71 Aligned_cols=152 Identities=18% Similarity=0.369 Sum_probs=131.6
Q ss_pred CeEEEEEEEeEEEccCceecCCCCCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEecccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDNM 80 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~~ 80 (232)
+|++++|++++|.|+||+|||+-||++.++++ .++||+||++++|++.... ...+..++|+++|+|.++.+
T Consensus 49 ~~~~~~wl~~~W~D~rL~W~~~~~~i~~i~v~-~~~IW~PDi~l~N~~~~~~---~~~~~~v~v~~~G~V~~~~~----- 119 (205)
T 4aoe_A 49 QVELGLWLVISWKDRSLSWSNECTTFNELTLP-SKYIWLPHIEVYNSIGKPG---IHSDQLVRVYKDGTVTFVPQ----- 119 (205)
T ss_dssp EEEEEEEEEEEEECCCCCCSCCCSCCCEEEEE-GGGSCCCCCEETTBSSCCE---ECSCCEEEEETTSEEEECCE-----
T ss_pred EEEEEEEEEEEEECCccccCCcCCCccEEEeC-HHHhccccEEEeccccccc---cccceEEEEeCCcEEEEeCc-----
Confidence 37899999999999999999733999999998 9999999999999885443 23456788899999999999
Q ss_pred ccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEEe
Q psy1864 81 RQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMA 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~~ 160 (232)
+.++++|+|+ ..||||+|.|+|+||
T Consensus 120 ------------------------------------------------------~~~~s~C~~d-~~fPfD~Q~C~l~fg 144 (205)
T 4aoe_A 120 ------------------------------------------------------YTIRFSCALE-NVTTEQGAACTLKFG 144 (205)
T ss_dssp ------------------------------------------------------EEEEEECCCT-TSSSSSCEEEEEEEE
T ss_pred ------------------------------------------------------EEEEEecccC-cCCCccCCeEEEEEE
Confidence 9999999999 899999999999999
Q ss_pred eeccCcceEEEEecCC-CCeee--eccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEe
Q psy1864 161 SYGWTTDDLIFLWKEG-DPVQV--VKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKR 220 (232)
Q Consensus 161 S~~~~~~~l~~~~~~~-~~~~~--~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR 220 (232)
||+|+.+++.+.+.++ +...+ ..+|++.+.++.+....| ||++ +|+.++|+|+|||
T Consensus 145 Sw~y~~~~l~l~~~~~~dl~~~~~n~EW~l~~~~~~r~~~~Y~CC~~----~y~dit~~i~lrR 204 (205)
T 4aoe_A 145 PWTYDVRDLVLDESQQVDLTTYAGGERFQLIEAKQKVNKKTYPCCPQ----SFEDIELRVTFKK 204 (205)
T ss_dssp CSSCCTTTEEEECSSSCBCTTSCTTCSEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEEE
T ss_pred CccCChheEEEecCcccchhccccCCcEEEEeeEEEEEEEEeCCCCC----CcceEEEEEEEEE
Confidence 9999999999976543 21222 347999999998877777 8875 8999999999999
No 9
>2bg9_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=9.4e-35 Score=267.00 Aligned_cols=162 Identities=21% Similarity=0.424 Sum_probs=138.7
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++.....+ +.|++||+|.++.+
T Consensus 49 ~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~-~~~IW~PDi~~~N~~~~~~~~~~~~~--~~v~~~G~V~~~~~---- 121 (370)
T 2bg9_B 49 EMTTSVFLNLAWTDYRLQWDPAAYEGIKDLSIP-SDDVWQPDIVLMNNNDGSFEITLHVN--VLVQHTGAVSWHPS---- 121 (370)
T ss_dssp EEEEEEECEEEEECTTSCCCTTTTSSCSEEEEE-SSSSCCCCEEESSCCCSCEESSSSCE--EEEETTSEEEECCE----
T ss_pred ceEEEEEEeeeeECcccCcCccccCCeeEEEec-hhhccCCCccccccccccccccccce--EEEeCCceEEEEec----
Confidence 48999999999999999999999 999999998 99999999999999998877655555 45799999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+..+++|+||+++||||+|.|+++|
T Consensus 122 -------------------------------------------------------~~~~~~C~mdl~~FPfD~Q~C~l~f 146 (370)
T 2bg9_B 122 -------------------------------------------------------AIYRSSCTIKVMYFPFDWQNCTMVF 146 (370)
T ss_dssp -------------------------------------------------------EEEEECCCCTTCSSSTTCCCCEEEE
T ss_pred -------------------------------------------------------ceEEEEccCcccCCCCCceeeeEEE
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCCCee---e--eccEEeCcEEEEEEEEEeeecCCCCCceEEEEEEEEEEecccceEEEEE
Q psy1864 160 ASYGWTTDDLIFLWKEGDPVQ---V--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~~~~---~--~~~~~l~~~~~~~~~~~~~~~~~~~~~ys~l~~~l~lkR~~~yYli~i~ 230 (232)
+||+|+.+++.+.|..++.+. + ..+|++.+.+..+. ..|+ +|.|+++++++++||+++||++|+|
T Consensus 147 ~S~~y~~~~i~l~~~~~~~~~~~~~~~~~eW~l~~~~~~~~--y~~~----~~~y~~l~~~~~l~R~~~~y~~~~~ 216 (370)
T 2bg9_B 147 KSYTYDTSEVILQHALDAMINQDAFTENGQWSIEHKPSRKN--WRSD----DPSYEDVTFYLIIQRKPLFYIVYTI 216 (370)
T ss_dssp EESSCCBTSCEEECSCCCCCSTTSCCTTCSSEECCCCEEEC--CCTT----SSSBCCEEEECCEECCCCSSHHHHH
T ss_pred EeccccccEEEEEeccCCccccccccccceEEEeccceEEe--ecCC----CCCccEEEEEEEEEEcccceeeeec
Confidence 999999999999992222222 2 34688887765443 1132 4799999999999999999998875
No 10
>2bg9_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=7.4e-35 Score=267.37 Aligned_cols=165 Identities=20% Similarity=0.409 Sum_probs=139.6
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++....+++. |++||+|.++.+
T Consensus 48 ~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~-~~~IW~PDi~~~N~~~~~~~~~~~~~~~--v~~~G~V~~~~~---- 120 (370)
T 2bg9_E 48 ALTTNVWIEIQWNDYRLSWNTSEYEGIDLVRIP-SELLWLPDVVLENNVDGQFEVAYYANVL--VYNDGSMYWLPP---- 120 (370)
T ss_dssp EEEEEEEEEEEEECGGGCCCTTTTTTCSCBCCC-GGGSCCCCEEESSSCCSCCBSSSSCCCE--ECSSSEEEECCE----
T ss_pred ceeEeEEEeeEEECCCcCCChhhcCCeeEEeec-hhccCCCCEeeccccCCcccccccccEE--EECCccEEEecC----
Confidence 48999999999999999999999 999999998 8999999999999999888766556654 699999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+.++++|+||+++||||+|.|+++|
T Consensus 121 -------------------------------------------------------~~~~~~C~mdl~~FPfD~Q~C~l~f 145 (370)
T 2bg9_E 121 -------------------------------------------------------AIYRSTCPIAVTYFPFDWQNCSLVF 145 (370)
T ss_dssp -------------------------------------------------------EEEEECCCCSSCSSSSSCCBCCEEE
T ss_pred -------------------------------------------------------EEEEEECcccccCCCCCeEEEEEEE
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCCCee---e--eccEEeCcEEEEEEEEE-e-eecCCCCCceEEEEEEEEEEecccceEEEEEE
Q psy1864 160 ASYGWTTDDLIFLWKEGDPVQ---V--VKNLHLPRFTLEKFYTD-Y-CNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~~~~---~--~~~~~l~~~~~~~~~~~-~-~~~~~~~~~ys~l~~~l~lkR~~~yYli~i~~ 231 (232)
+||+|+.+++.+.|..++.+. + ..+|++.+.+..+.... | |+ +|.|+++++++++||+++||++|+|+
T Consensus 146 ~S~~y~~~~i~l~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~~y~~~----~~~y~~l~~~~~l~R~~~~y~~~~~i 220 (370)
T 2bg9_E 146 RSQTYNAHEVNLQLSAEEGIDPEDFTENGEWTIRHRPAKKNYNWQLTKD----DIDFQEIIFFLIIQRKPLFYIINIIA 220 (370)
T ss_dssp EESSSCTTSCCEECCCSCCCGGGSCCTTSSEEEEECCCCEECCCCTTCC----CSCCCEEEECCEEEECCCSSHHHHHH
T ss_pred EeeccccceeEEEecCCCcccHhhcccccEEEEecceeEEEEEecccCC----CCCCcEEEEEEEEEEccCceeEEEeh
Confidence 999999999999998753222 2 23577665544332221 2 22 47999999999999999999988753
No 11
>4aod_A Acetylcholine-binding protein type 1; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholine receptor; 6.00A {Biomphalaria glabrata}
Probab=100.00 E-value=5e-33 Score=238.87 Aligned_cols=152 Identities=22% Similarity=0.366 Sum_probs=131.6
Q ss_pred CeEEEEEEEeEEEccCceecCCCCCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEecccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDNM 80 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~~ 80 (232)
++++++|++++|.|+||+||++-|||+.++++ .++||+||++++|++++.. ...+..++|+++|+|.++.+
T Consensus 49 ~~t~~~wl~~~W~D~rL~W~~~~~~i~~i~v~-~~~IW~PDi~l~N~~~~~~---~~~~~~~~v~~~G~V~~~~~----- 119 (205)
T 4aod_A 49 EVDIGLWTTLVWKDRCLNWFNEFTSFKELTVP-IAEIWTPDIFIFDSVGAPE---IFSDKLARVSQDGTVTYVPQ----- 119 (205)
T ss_dssp EEEEEEEEEEEEECCCCCCSCCCSCCCEEEEE-GGGSCCCCEEETTBSSCCE---ECSCCEEEEETTSEEEECCE-----
T ss_pred EEEEEEEEEEEEECCceeeCCcCCCccEeecc-HHhcCcCCEEEEcccccce---eecceEEEEecCCEEEEecc-----
Confidence 47899999999999999999733999999998 9999999999999986542 23455678899999999999
Q ss_pred ccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEEe
Q psy1864 81 RQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMA 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~~ 160 (232)
+.++++|+|++..|||| |.|+|+|+
T Consensus 120 ------------------------------------------------------~~~~s~C~~d~~~fPfD-Q~C~l~fg 144 (205)
T 4aod_A 120 ------------------------------------------------------LKVRLSCPLADLKLETG-VTCSLKSG 144 (205)
T ss_dssp ------------------------------------------------------EEEEEECCCTTSSSSSC-EEEEEEEE
T ss_pred ------------------------------------------------------EEEEEEecCccccCCCC-cEEEEEEE
Confidence 99999999999999999 99999999
Q ss_pred eeccCcceEEEEecCCC-Ceee--eccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEe
Q psy1864 161 SYGWTTDDLIFLWKEGD-PVQV--VKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKR 220 (232)
Q Consensus 161 S~~~~~~~l~~~~~~~~-~~~~--~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR 220 (232)
||+|+++++.+.+.++- ...+ ..+|++.+.++.+....| ||+. +|+.++++|+|||
T Consensus 145 Sw~y~~~~i~l~~~~~~dl~~~~~n~EW~l~~~~~~~~~~~Y~cc~~----~Y~~it~~~~lrR 204 (205)
T 4aod_A 145 SWTHSTQELTLEVNAKVDLGDYASDTRFQLLNATQQVNRKQYPCCPE----TYEDTTLSFTFRK 204 (205)
T ss_dssp ESSCCTTTEEEECSSSCBCTTSCTTCSSEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEEC
T ss_pred CccccccEEEEEECCCcccccccccCCEEEEeeEEEEEEEEeCCCCC----CcceEEEEEEEEC
Confidence 99999999999987642 1222 347999999998877776 8864 9999999999976
No 12
>3igq_A GLR4197 protein; plgic Cys-loop, membrane protein, transport protein; 2.30A {Gloeobacter violaceus}
Probab=100.00 E-value=3e-33 Score=239.08 Aligned_cols=155 Identities=18% Similarity=0.286 Sum_probs=120.8
Q ss_pred CeEEEEEEEeEEEccCceecCCCCCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEecccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDNM 80 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~~ 80 (232)
+|++++|++++|.|+||+|||+++|+..+.++ .++||+||++++|+++... ..+..++|+++|+|.++.+
T Consensus 36 ~~t~~~~l~~~W~D~rL~w~~~~~~i~~~~~~-~~~IW~PDi~l~N~~~~~~----~~~~~v~v~~~G~V~~~~~----- 105 (201)
T 3igq_A 36 TFKVNAFLSLSWKDRRLAFDPVRSGVRVKTYE-PEAIWIPEIRFVNVENARD----ADVVDISVSPDGTVQYLER----- 105 (201)
T ss_dssp EEEEEEEEEEEEECGGGCCCHHHHTCSCEECC-GGGSCCCCEEESSBSSSCE----EEEEEEEECTTCEEEEEEE-----
T ss_pred EEEEEEEEeeEEECCccCCCCcCCCEeEeccc-ccCcCccCEEEEccccccc----ccceEEEEeCCCcEEEecc-----
Confidence 48999999999999999999988789999998 9999999999999976542 4567888999999999999
Q ss_pred ccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEEe
Q psy1864 81 RQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMA 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~~ 160 (232)
+.++++|+|+++.||||+|.|+|+|+
T Consensus 106 ------------------------------------------------------~~~~s~C~mdl~~FPfD~Q~C~l~f~ 131 (201)
T 3igq_A 106 ------------------------------------------------------FSARVLSPLDGRRTESDSQTLHIYLI 131 (201)
T ss_dssp ------------------------------------------------------EEEEEECCCC------CEEEEEEEEE
T ss_pred ------------------------------------------------------eeEEEecCcccccCCCCccEeeEEEe
Confidence 99999999999999999999999999
Q ss_pred eeccCcceEEEEecCCCCeeeec-----cEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEecccc
Q psy1864 161 SYGWTTDDLIFLWKEGDPVQVVK-----NLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKREFSY 224 (232)
Q Consensus 161 S~~~~~~~l~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~~~y 224 (232)
||+|+.+++.+.|.. +++...+ +|++.++++.+....| ||++ +|+.++|.|.+||+-+-
T Consensus 132 S~~y~~~~v~l~~~~-~~~~~~~~~~~~ew~l~~~~~~~~~~~y~cc~~----~y~~i~f~i~irR~~~~ 196 (201)
T 3igq_A 132 VRSVDTRNIVLAVDL-EKVGKNDDVFLTGWDIESFTAVVKPANFALEDR----LESKLDYQLRISRQGGH 196 (201)
T ss_dssp ECCCSSCCEEEEECG-GGCEESCSEEETTEEEEEEEEEEEC------------CCCEEEEEEEEEEC---
T ss_pred ccCCCceEEEEEecC-CccccccCcccCCeEEEeeEEEEEEEEeCCCCC----ccCeEEEEEEEEECCCC
Confidence 999999999999976 3344433 4666655555444333 7764 89999999999999764
No 13
>4afh_A ACHBP; acetylcholine-binding protein, nicotinic receptor, ION chann; HET: NAG BMA MAN L0B; 1.88A {Capitella teleta} PDB: 4afg_A* 4b5d_A*
Probab=100.00 E-value=3.5e-33 Score=243.54 Aligned_cols=156 Identities=16% Similarity=0.274 Sum_probs=129.4
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++... ...++|+++|+|.++.+
T Consensus 58 ~~t~~~~l~~~W~D~rL~wnp~~~~~i~~i~l~-~~~IW~PDi~l~N~~~~~~~~~~--~~~v~v~~~G~V~~~~~---- 130 (230)
T 4afh_A 58 IGTFKAIVKLSWVDTILRWDPEPPFDFQKIEIS-PDEIWTPDIKLFNSVDLDMTLDR--TTQAIVFSNGTVLWIPP---- 130 (230)
T ss_dssp EEEEEEEEEEEEECGGGCCCCCTTSCCSEEEEC-GGGSCCCCEEETTCSSSSCEECT--TSCEEEETTSEEEECCE----
T ss_pred EEEEEEEEeeEEECccccCCcccCCCeeEEEec-cCCEECCcEEEEecccccccccc--cceEEEEcCCEEEEecC----
Confidence 47899999999999999999999 999999998 99999999999999998876533 34567899999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+.++++|+| |||+|.|+|+|
T Consensus 131 -------------------------------------------------------~~~~s~C~m-----PfD~Q~C~l~f 150 (230)
T 4afh_A 131 -------------------------------------------------------AVLKVLCVS-----QDDVDSCHFQF 150 (230)
T ss_dssp -------------------------------------------------------EEEEEEEEE-----ETTEEEEEEEE
T ss_pred -------------------------------------------------------EEEEEECCC-----CCCcccCCEee
Confidence 999999999 99999999999
Q ss_pred eeeccCcceEEEEecCCC----C-eeeeccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEecccceEEE
Q psy1864 160 ASYGWTTDDLIFLWKEGD----P-VQVVKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKREFSYYLIQ 228 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~----~-~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~~~yYli~ 228 (232)
+||+|+.+++.+.|..+. . ..... |++.+..+.+....| ||+ ++|+.++|+|+|||+++||+++
T Consensus 151 ~S~~y~~~~v~l~~~~~~~~~d~~~~~n~-W~l~~~~~~~~~~~y~cc~----~~y~~i~f~~~irRrpl~~~~~ 220 (230)
T 4afh_A 151 GSWVYSVDEVDIHFMDDKAEVLLDFYQDS-LEILENSAQRQEVVYPCCE----SAYVEMKYLLALRSENGNSTYS 220 (230)
T ss_dssp EESSCCTTTEEEEEGGGCCSCBCTTCCCC-CCEEEEEEEEEEECCTTCS----SCEEEEEEEEEEECC-------
T ss_pred ccccccCceEEEEECCCCcccceeeecCc-EEEEEEEEEEEEEecCCCC----CCccEEEEEEEEEEeechhhcc
Confidence 999999999999997632 1 11234 998888887665554 665 4899999999999999999986
No 14
>1uw6_A Acetylcholine-binding protein; pentamer, IGG fold, nicotine, glycoprotein; HET: NCT; 2.2A {Lymnaea stagnalis} SCOP: b.96.1.1 PDB: 1i9b_A* 1ux2_A* 3u8l_A* 1yi5_A 1uv6_A* 3u8k_A* 3u8j_B* 3u8m_A* 3u8n_A* 2zju_A* 2zjv_A*
Probab=100.00 E-value=1.7e-32 Score=234.32 Aligned_cols=153 Identities=22% Similarity=0.391 Sum_probs=128.6
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ |+ .++++ .++||+||++++|++++. . .... ..++|+++|+|.++.+
T Consensus 48 ~~~~~~~~~~~W~D~rL~w~~~~~~~--~l~~~-~~~iW~PDi~~~N~~~~~-~-~~~~-~~~~i~~~G~V~~~~~---- 117 (211)
T 1uw6_A 48 EVDVVFWQQTTWSDRTLAWNSSHSPD--QVSVP-ISSLWVPDLAAYNAISKP-E-VLTP-QLARVVSDGEVLYMPS---- 117 (211)
T ss_dssp EEEEEEEEEEEEECGGGCCCCTTSCS--EEEEE-GGGSCCCCEEETTBCSCC-E-ECSC-CEEEEETTSEEEECCE----
T ss_pred EEEEEEEEEeEeECcccccChhhcCC--eEEcc-HHHccCCCEeeecccccc-c-ccee-eEEEEeCCceEEEeCC----
Confidence 47899999999999999999999 77 89998 999999999999999887 3 3333 7888999999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccc---cccccCcccceeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCP---MNLKLYPLDRQSCS 156 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~---m~l~~fPfD~Q~C~ 156 (232)
+.++++|+ |+++ |+|.|+
T Consensus 118 -------------------------------------------------------~~~~~~C~~~~mdl~----D~Q~C~ 138 (211)
T 1uw6_A 118 -------------------------------------------------------IRQRFSCDVSGVDTE----SGATCR 138 (211)
T ss_dssp -------------------------------------------------------EEEEEECCCTTTTSS----SCEEEE
T ss_pred -------------------------------------------------------EEEEEECCCCCCCCC----cceEeE
Confidence 99999999 9999 999999
Q ss_pred eEEeeeccCcceEEEEecCCCCeee------eccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEecccceEE
Q psy1864 157 LKMASYGWTTDDLIFLWKEGDPVQV------VKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKREFSYYLI 227 (232)
Q Consensus 157 l~~~S~~~~~~~l~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~~~yYli 227 (232)
|+|+||+|+.+++.+.|..+ ++.. ..+|++.+.++.+....| ||+ |.|++++++|+|||+++||++
T Consensus 139 l~f~S~~y~~~~i~l~~~~~-~~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~----~~y~~l~~~~~l~R~~~yyil 211 (211)
T 1uw6_A 139 IKIGSWTHHSREISVDPTTE-NSDDSEYFSQYSRFEILDVTQKKNSVTYSCCP----EAYEDVEVSLNFRKKGRSEIL 211 (211)
T ss_dssp EEEEESSCCTTTEEEEECCC-SSCTTTTSCTTSSEEEEEEEEEEEEEECTTCS----SEEEEEEEEEEEEECCCC---
T ss_pred EEEEcccccCceEEEEeccc-ccchhhhcccCCCEEEEeeEEEEEEEEeCCCC----CCcceEEEEEEEEEccceeEC
Confidence 99999999999999999764 2322 346777777665544444 554 699999999999999999985
No 15
>4aq5_A Acetylcholine receptor subunit alpha; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_A
Probab=99.98 E-value=1.6e-33 Score=267.05 Aligned_cols=166 Identities=20% Similarity=0.478 Sum_probs=140.8
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++..... .++|++||+|.++.+
T Consensus 73 ~~t~~~~l~~~W~D~rL~Wnp~~y~gi~~l~vp-~~~IW~PDi~l~N~~d~~~~~~~~~--~v~v~~dG~V~~~~~---- 145 (461)
T 4aq5_A 73 IVETNVRLRQQWIDVRLRWNPADYGGIKKIRLP-SDDVWLPDLVLYNNADGDFAIVHMT--KLLLDYTGKIMWTPP---- 145 (461)
T ss_dssp EEEEEEEEEEEECCTTCBCCTTTHHHHSSEEEE-GGGSCCCCEEESSCCCSCCTTCSSC--EEEECSBCCEEECCE----
T ss_pred EEEEEEEEeeeeECcccCCChhhcCCccEEEec-CCCEECCceeeeccccccccccccc--ceEEcCCccEEEecc----
Confidence 48999999999999999999999 999999998 9999999999999999887754443 467899999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+..+++|+||+++||||+|.|+++|
T Consensus 146 -------------------------------------------------------~~~~s~C~mdl~~FPfD~Q~C~l~f 170 (461)
T 4aq5_A 146 -------------------------------------------------------AIFKSYCEIIVTHFPFDQQNCTMKL 170 (461)
T ss_dssp -------------------------------------------------------EEEEEECCCCGGGSSSSCEEEEEEE
T ss_pred -------------------------------------------------------ccccccccccccCCCCccCccCeEE
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCC--Ceee--eccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEecccceEEEEEE
Q psy1864 160 ASYGWTTDDLIFLWKEGD--PVQV--VKNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~--~~~~--~~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~~~yYli~i~~ 231 (232)
+||+|+.+++.+.+.... ..++ ..+|++.+.+..+....| |+. +++|+++++++++||+++||++|+|+
T Consensus 171 ~S~~y~~~~v~l~~~~~~~~l~~~~~~~eW~l~~~~~~~~~~~y~~~~---~~~y~~l~~~~~l~R~~~~Y~i~l~i 244 (461)
T 4aq5_A 171 GIWTYDGTKVSISPESDRPDLSTFMESGEWVMKDYRGWKHWVYYTCCP---DTPYLDITYHFIMQRIPLYFVVNVII 244 (461)
T ss_dssp EESSCCTTTEEEECCCCCCSGGGCCTTCSSEEEEEEEEEEECCCSSSS---SCCCEEEEEEEEEECCCTHHHHHHHH
T ss_pred eccccCCceEEEEeccccccHHhhhccCceEEeeeeeEEEEEeecCcC---CCCcceEEEEEEEEecccceeeehhh
Confidence 999999999999976532 1122 346888877765544433 332 13899999999999999999988763
No 16
>2bj0_A Acetylcholine-binding protein; 3D-structure, glycoprotein, glycprotein, IGG fold, immunoglobulin domain, pentamer, signal; HET: CXS; 2.0A {Bulinus truncatus}
Probab=99.98 E-value=4.1e-32 Score=230.72 Aligned_cols=150 Identities=19% Similarity=0.381 Sum_probs=128.9
Q ss_pred CeEEEEEEEeEEEccCc-eecCCCCCeeEEEeccCCceecCcEEeecc-ccCcceeeeecceEEEEcCCceEEEEecccc
Q psy1864 1 EYSVQLTFREQWLDERL-KYNDYDGRIKYLTLTEASRVWMPDLFFSNE-KEGHFHNIIMPNVYIRIHPQGSVLYSISDLD 78 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL-~wn~~~g~i~~l~l~~~~~iW~Pdi~~~N~-~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~ 78 (232)
+|++++|++++|.|+|| +|||++ |++.+.++ .++||+||++++|+ +++.++.. ..++|+++|+|.++.+
T Consensus 45 ~~~~~~~~~~~W~D~rL~~w~~~~-~i~~~~~~-~~~iW~PDi~~~N~~~~~~~~~~----~~v~i~~~G~V~~~~~--- 115 (203)
T 2bj0_A 45 QVEVVLWTQASWKVPYYSSLLSSS-SLDQVSLP-VSKMWTPDLSFYNAIAAPELLSA----DRVVVSKDGSVIYVPS--- 115 (203)
T ss_dssp EEEEEEEEEEEEECGGGGGGTTTS-SCSEEEEE-GGGSCCCCEEETTCSSCCEECSC----CEEEEETTSEEEECCE---
T ss_pred EEEEEEEEEeEEECcchhccCccC-CceEEEEc-hhhccCCCccccccccccccccc----eEEEEeCCcEEEEecc---
Confidence 48899999999999999 999998 99999998 99999999999999 98887764 6778899999999999
Q ss_pred ccccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEecccc-ccccCcccceeEEe
Q psy1864 79 NMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPM-NLKLYPLDRQSCSL 157 (232)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m-~l~~fPfD~Q~C~l 157 (232)
+.++++|+| ++++ ||+|.|+|
T Consensus 116 --------------------------------------------------------~~~~~~C~m~dl~~--fD~Q~C~l 137 (203)
T 2bj0_A 116 --------------------------------------------------------QRVRFTCDLINVDT--EPGATCRI 137 (203)
T ss_dssp --------------------------------------------------------EEEEEECCCTTTTS--SSCEEEEE
T ss_pred --------------------------------------------------------eEEEEEccccccCc--cccceeeE
Confidence 999999999 9998 99999999
Q ss_pred EEeeeccCcceEEEEecCCCCeeee-----ccEEeCcEEEEEEEEEe-eecCCCCCceEEEEEEEEEEec
Q psy1864 158 KMASYGWTTDDLIFLWKEGDPVQVV-----KNLHLPRFTLEKFYTDY-CNSKTNTGAYSCLKVDLLFKRE 221 (232)
Q Consensus 158 ~~~S~~~~~~~l~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~-~~~~~~~~~ys~l~~~l~lkR~ 221 (232)
+|+||+|+.+++.+.|..+.++... .+|++.+++..+....| || +|.|++++++|+|||+
T Consensus 138 ~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~----~~~y~~l~~~~~l~R~ 203 (203)
T 2bj0_A 138 KVGSWTHDNKQFALITGEEGVVNIAEYFDSPKFDLLSATQSLNRKKYSCC----ENMYDDIEITFAFRKK 203 (203)
T ss_dssp EEEESSCCTTTEEEEECTTTTSCTTTTCCCSSEEEEEEEEEEEEEECTTC----SSEEEEEEEEEEEEEC
T ss_pred EEEcccccCcEEEEEecCCCccchhcceecCCEEEEEeEEEEEEEecCCC----CCCeeEEEEEEEEEEC
Confidence 9999999999999999764324433 35666666655444444 44 3699999999999997
No 17
>4aq5_C Acetylcholine receptor delta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_C
Probab=99.98 E-value=3.1e-33 Score=268.62 Aligned_cols=166 Identities=22% Similarity=0.448 Sum_probs=137.6
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++.....++. |+++|+|.|..+
T Consensus 72 ~~t~~vwl~q~W~D~RL~Wnp~~y~gi~~l~vp-~~~IW~PDi~l~N~~d~~~~~~~~~nv~--V~~dG~V~~~~~---- 144 (522)
T 4aq5_C 72 TLTTNVWMDHAWYDHRLTWNASEYSDISILRLR-PELIWIPDIVLQNNNDGQYNVAYFCNVL--VRPNGYVTWLPP---- 144 (522)
T ss_dssp EEEEEEEEEEEEECTTCCCCCCCCCTCSCEEEC-GGGSCCCCEEETTTCSSCCBSCSSCCEE--ECSSSEEEECCE----
T ss_pred EEEEEEEEeeeEeCcccCCCchhcCCceEEeec-cCCEECCcEeccccccCCccccccceEE--EeCCccEEEEcc----
Confidence 48999999999999999999999 999999998 9999999999999999988776666654 699999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+..+++|+||+++||||+|.|+|+|
T Consensus 145 -------------------------------------------------------~~~~ssC~mdl~~FPfD~Q~C~L~f 169 (522)
T 4aq5_C 145 -------------------------------------------------------AIFRSSCPINVLYFPFDWQNCSLKF 169 (522)
T ss_dssp -------------------------------------------------------EEEEECCCCTTTSCSTTCCEEEEEE
T ss_pred -------------------------------------------------------cccccccccccCcCCCcCceEeEEE
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCCC----------------eeeeccEEeCcEEEEEEEEE-eeecCCCCCceEEEEEEEEEEecc
Q psy1864 160 ASYGWTTDDLIFLWKEGDP----------------VQVVKNLHLPRFTLEKFYTD-YCNSKTNTGAYSCLKVDLLFKREF 222 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~~----------------~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~ys~l~~~l~lkR~~ 222 (232)
+||+|+.+++.+.|..+++ .....+|++.+.+..+.... +|+ .++.|++++++|++||++
T Consensus 170 ~S~~Y~~~~v~l~~~~~~~~~~~~~~~~~~~d~~~f~~~gEW~l~~~~~~~~~~~~~~~---~~~~y~~l~~~~~lrR~~ 246 (522)
T 4aq5_C 170 TALNYNANEISMDLMTDTIDGKDYPIEWIIIDPEAFTENGEWEIIHKPAKKNIYGDKFP---NGTNYQDVTFYLIIRRKP 246 (522)
T ss_dssp EETTCCTTTCCEEC---------------CCSTTSCCTTCSEEEEECCEEEEECCCSSC---SSCCCEEEEEEEEEEECC
T ss_pred ecccccCceeEEEeccCcccccCccceeeeccHHHceecceEEEeeeEEEEEeeecccc---CCCCcceEEEEEEEeccc
Confidence 9999999999999876431 11123577766554433222 233 245799999999999999
Q ss_pred cceEEEEEE
Q psy1864 223 SYYLIQIYY 231 (232)
Q Consensus 223 ~yYli~i~~ 231 (232)
+||++|+|+
T Consensus 247 ~~Yii~l~i 255 (522)
T 4aq5_C 247 LFYVINFIT 255 (522)
T ss_dssp SSHHHHHHH
T ss_pred ceeeeehhh
Confidence 999988763
No 18
>3rqw_A ELIC pentameric ligand gated ION channel from ERW chrysanthemi; membrane, transport protein; HET: ACH MES; 2.91A {Dickeya dadantii} PDB: 2yn6_A* 3rqu_A* 3uq4_A 3uq5_A 3uq7_A 2vl0_A 2yks_A 4a97_A* 4a96_A* 2yoe_A* 4a98_A*
Probab=99.97 E-value=7.8e-33 Score=248.41 Aligned_cols=163 Identities=22% Similarity=0.325 Sum_probs=132.1
Q ss_pred CeEEEEEEEeEEEccCceecCCCCCeeEEEecc-------CCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEE
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE-------ASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYS 73 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~g~i~~l~l~~-------~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s 73 (232)
+|++++|++++|.|+||+|+ +++.+++++ .++||+||++++|++++.. ..+..++|++||+|.+.
T Consensus 32 ~~t~~~~l~~~W~D~rL~~~----~~~~l~l~~~~~~~ip~~~IW~Pdi~l~N~~~~~~----~~~~~~~i~~~G~V~~~ 103 (322)
T 3rqw_A 32 TYKVDGYIVAQWTGKPRKTP----GDKPLIVENTQIERWINNGLWVPALEFINVVGSPD----TGNKRLMLFPDGRVIYN 103 (322)
T ss_dssp EEEEEEEEEEEEECSCCCCS----TTSCEEEETHHHHHHHHTTCCCCCEEETTBSSCCE----EEEEEEEECTTSEEEEE
T ss_pred EEEEEEEEeeEEechhhCCC----CCCceeecchhhcccccccccCCcEEEEcccCccc----ccceeEEEeCCcCEEEe
Confidence 48999999999999999994 577765431 8999999999999998876 56678889999999999
Q ss_pred eccccccccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccce
Q psy1864 74 ISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQ 153 (232)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q 153 (232)
.+ +..+++|+||+++||||+|
T Consensus 104 ~~-----------------------------------------------------------~~~~~~C~~dl~~FPfD~Q 124 (322)
T 3rqw_A 104 AR-----------------------------------------------------------FLGSFSNDMDFRLFPFDRQ 124 (322)
T ss_dssp EE-----------------------------------------------------------EEEEEECCCCCTTTTSCEE
T ss_pred ec-----------------------------------------------------------eeEEEeccccccCCCCCCc
Confidence 99 9999999999999999999
Q ss_pred eEEeEEeeeccCcceEEEEecCCCC----eeeeccEEe-CcEEEEEEEEEe-eecCCC--CCceEEEEEEEEEEecccce
Q psy1864 154 SCSLKMASYGWTTDDLIFLWKEGDP----VQVVKNLHL-PRFTLEKFYTDY-CNSKTN--TGAYSCLKVDLLFKREFSYY 225 (232)
Q Consensus 154 ~C~l~~~S~~~~~~~l~~~~~~~~~----~~~~~~~~l-~~~~~~~~~~~~-~~~~~~--~~~ys~l~~~l~lkR~~~yY 225 (232)
.|+++|+||+|+.+++.+.|.++.. .....+|++ .+++.......| +....+ +|.|+++++++++||+++||
T Consensus 125 ~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~ew~l~~~~~~~~~~~~y~~~~~~~~~~~~y~~l~~~~~l~R~~~~y 204 (322)
T 3rqw_A 125 QFVLELEPFSYNNQQLRFSDIQVYTENIDNEEIDEWWIRGKASTHISDIRYDHLSSVQPNQNEFSRITVRIDAVRNPSYY 204 (322)
T ss_dssp EEEEEEEESSCSSEEEEEEEEECCSCSSSSCSSSSEEECCSCEECCEEEECTTSCCSSSSCCEEEEEEEEEEEEECCHHH
T ss_pred EEEEEEEEcccCcceEEEEECCCcccccCCCCCCceEEEeeeEEEeeccccceeeeccCCCCCeEEEEEEEEEEEeeeee
Confidence 9999999999999999999875431 112345666 665554222222 222222 68999999999999999999
Q ss_pred EEEEE
Q psy1864 226 LIQIY 230 (232)
Q Consensus 226 li~i~ 230 (232)
++|+|
T Consensus 205 ~~~~~ 209 (322)
T 3rqw_A 205 LWSFI 209 (322)
T ss_dssp HHHTH
T ss_pred eehHH
Confidence 98875
No 19
>4aq5_E Acetylcholine receptor gamma subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_E
Probab=99.97 E-value=1.3e-33 Score=269.09 Aligned_cols=166 Identities=20% Similarity=0.403 Sum_probs=139.4
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++.....++. |+++|+|.|+.+
T Consensus 48 ~~t~~v~l~~~W~D~rL~Wnp~~y~gi~~l~v~-~~~IW~PDi~l~N~~d~~~~~~~~~nv~--v~~~G~V~~~~~---- 120 (488)
T 4aq5_E 48 ALTTNVWIEIQWNDYRLSWNTSEYEGIDLVRIP-SELLWLPDVVLENNVDGQFEVAYYANVL--VYNDGSMYWLPP---- 120 (488)
T ss_dssp BEEEEEEEEEEEECCTTCCCTTTTTTCSCCCCC-TTSSCCCCEECSSSCCSCCBSCSSSCCC--BCTTSEEEECCE----
T ss_pred eeeeeeeeeeEEECcccCcCchhcCCceEEecC-ccCEECCceehhccccccccccccccEE--EeCCceEEEecc----
Confidence 48999999999999999999999 999999998 9999999999999999988776666654 699999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+..+++|+||+++||||+|.|+|+|
T Consensus 121 -------------------------------------------------------~~~~s~C~mdl~~FPfD~Q~C~l~f 145 (488)
T 4aq5_E 121 -------------------------------------------------------AIYRSTCPIAVTYFPFDWQNCSLVF 145 (488)
T ss_dssp -------------------------------------------------------EBCEECCCCSSSSSSSSCCCCCEEE
T ss_pred -------------------------------------------------------eeEEeecccccccCCCcCceeeEEe
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCCCe----------ee--eccEEeCcEEEEEEEEE-eeecCCCCCceEEEEEEEEEEecccceE
Q psy1864 160 ASYGWTTDDLIFLWKEGDPV----------QV--VKNLHLPRFTLEKFYTD-YCNSKTNTGAYSCLKVDLLFKREFSYYL 226 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~~~----------~~--~~~~~l~~~~~~~~~~~-~~~~~~~~~~ys~l~~~l~lkR~~~yYl 226 (232)
+||+|+.+++.+.|..++.. .+ ..+|++.+.+..+.... +|+ .++.|++++++|+|||+++||+
T Consensus 146 ~S~~y~~~~v~l~~~~~~~~~~~~~~~d~~~~~~~~eW~l~~~~~~~~~~~~~~~---~~~~y~~l~~~~~lrR~~~~Y~ 222 (488)
T 4aq5_E 146 RSQTYNAHEVNLQLSAEEGEVVEWIHIDPEDFTENGEWTIRHRPAKKNYNWQLTK---DDIDFQEIIFFLIIQRKPLFYI 222 (488)
T ss_dssp EESSSCSSSCCEECCCSCC-------CGGGSCCTTCSEEEEECCCEEECCCCTTC---CCSCCCEEEECCEEEECCCSSH
T ss_pred eeeccccceEEEEeccCCCcceeeeeccHHHccccceEEEEeeEEEEEEeeeccC---CCCCcceEEEEEEEccchhhee
Confidence 99999999999999865421 11 23577665544332221 232 2467999999999999999999
Q ss_pred EEEEE
Q psy1864 227 IQIYY 231 (232)
Q Consensus 227 i~i~~ 231 (232)
+|+|+
T Consensus 223 i~l~i 227 (488)
T 4aq5_E 223 INIIA 227 (488)
T ss_dssp HHHHH
T ss_pred hhHhH
Confidence 88763
No 20
>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B
Probab=99.97 E-value=7.2e-33 Score=264.29 Aligned_cols=163 Identities=21% Similarity=0.438 Sum_probs=136.8
Q ss_pred CeEEEEEEEeEEEccCceecCCC-CCeeEEEeccCCceecCcEEeeccccCcceeeeecceEEEEcCCceEEEEeccccc
Q psy1864 1 EYSVQLTFREQWLDERLKYNDYD-GRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSISDLDN 79 (232)
Q Consensus 1 ~~~v~~~~~~~W~D~rL~wn~~~-g~i~~l~l~~~~~iW~Pdi~~~N~~~~~~~~~~~~~~~i~I~~~G~V~~s~~~~~~ 79 (232)
+|++++|++++|.|+||+|||++ ||++.++++ .++||+||++++|++++.++.....++ .|++||+|.++.+
T Consensus 73 ~~t~~v~l~~~W~D~rL~Wnp~~y~gi~~l~v~-~~~IW~PDi~l~N~~d~~~~~~~~~nv--~v~~~G~V~~~~~---- 145 (493)
T 4aq5_B 73 EMTTSVFLNLAWTDYRLQWDPAAYEGIKDLSIP-SDDVWQPDIVLMNNNDGSFEITLHVNV--LVQHTGAVSWHPS---- 145 (493)
T ss_dssp EEEEEEECEEEEECTTCCCCHHHHSSCSCEEEC-SCSSCCCCCEESSCCCSCEESSSSSCE--EECTTSEEEECCE----
T ss_pred EEEEEEEeecceECcccCCChhhcCCeeEEecc-cccCccCcEEEecccccccccccccce--EEecCCCEEEeee----
Confidence 48999999999999999999999 999999998 999999999999999988876655565 4799999999999
Q ss_pred cccccccccccCCCCcccccccccccccccceeeeeeeeecceeEeeeeeeeeeeeeEEeccccccccCcccceeEEeEE
Q psy1864 80 MRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKM 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t~~C~m~l~~fPfD~Q~C~l~~ 159 (232)
+..+++|+||+++||||+|.|+|+|
T Consensus 146 -------------------------------------------------------~~~~s~C~mdl~~FPfD~Q~C~l~f 170 (493)
T 4aq5_B 146 -------------------------------------------------------AIYRSSCTIKVMYFPFDWQNCTMVF 170 (493)
T ss_dssp -------------------------------------------------------EEEEECCSCTTCSSSTTCCCCEEEE
T ss_pred -------------------------------------------------------eeeeecccccccCCCccceeEEEEE
Confidence 9999999999999999999999999
Q ss_pred eeeccCcceEEEEecCCCC---------e---ee--eccEEeCcEEEEEEEEEeeecCCCCCceEEEEEEEEEEecccce
Q psy1864 160 ASYGWTTDDLIFLWKEGDP---------V---QV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYY 225 (232)
Q Consensus 160 ~S~~~~~~~l~~~~~~~~~---------~---~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~ys~l~~~l~lkR~~~yY 225 (232)
+||+|+.+++.+.|..+++ + ++ ..+|++.+.+..+. ....++.|+++++++++||+++||
T Consensus 171 ~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~l~~f~~~~eW~l~~~~~~~~------~~~~~~~y~~l~~~~~lrR~~~~Y 244 (493)
T 4aq5_B 171 KSYTYDTSEVILQHALDAKGEREVKEIMINQDAFTENGQWSIEHKPSRKN------WRSDDPSYEDVTFYLIIQRKPLFY 244 (493)
T ss_dssp ECSSCCBTSCEEECCCCC---------CCSGGGCCTTCSSBCCCCCCEEC------CCTTSSSBCCEEEECCCBCCCCSS
T ss_pred eeecCccccEEEEeccCCCCccceecccccHHHhccccceeeeeeeEEEE------eecCCCCccEEEEEEEEEecccee
Confidence 9999999999999965431 1 11 23576665543221 111234899999999999999999
Q ss_pred EEEEEE
Q psy1864 226 LIQIYY 231 (232)
Q Consensus 226 li~i~~ 231 (232)
++|+|+
T Consensus 245 ~i~l~i 250 (493)
T 4aq5_B 245 IVYTIV 250 (493)
T ss_dssp TTTTHH
T ss_pred eehhhh
Confidence 988763
No 21
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=84.08 E-value=0.015 Score=52.10 Aligned_cols=32 Identities=47% Similarity=0.898 Sum_probs=27.2
Q ss_pred cccceeeeeeeeecceeEeeeeeeeeeeeeEE
Q psy1864 107 TRSKRIDVISRITFPLVFALFNLTYWSTISLT 138 (232)
Q Consensus 107 ~~~~~~~~~~r~~fp~~f~~fn~~yw~~~~~t 138 (232)
-...++|.++|+.||..|++||+.||.....+
T Consensus 310 ~~~~~~~~~~~~~~p~~~~i~n~~~~~~~~~~ 341 (347)
T 3rhw_A 310 DISKRVDLISRALFPVLFFVFNILYWSRFGHH 341 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34567899999999999999999999877654
No 22
>2lkg_A Acetylcholine receptor; transmembrane domain, SIGN protein; NMR {Torpedo marmorata} PDB: 2lkh_A
Probab=80.32 E-value=0.0011 Score=53.90 Aligned_cols=26 Identities=12% Similarity=0.080 Sum_probs=23.1
Q ss_pred CCCceEEEEEEEEEEecccceEEEEE
Q psy1864 205 NTGAYSCLKVDLLFKREFSYYLIQIY 230 (232)
Q Consensus 205 ~~~~ys~l~~~l~lkR~~~yYli~i~ 230 (232)
++|.|+++++.+++||+++||++|+|
T Consensus 32 ~~g~y~~l~~~f~lrR~~~~y~~~li 57 (140)
T 2lkg_A 32 EAGRLIELSQEGGGGGGPLYFVVNVI 57 (140)
T ss_dssp HHHHHHHHHHTSCSSSCTHHHHHHHH
T ss_pred CCCcEEEEEEEEEEEEcceeeeehhh
Confidence 56788999999999999999998765
Done!