Your job contains 1 sequence.
>psy1864
EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV
YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITF
PLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQ
VVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYYY
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1864
(232 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0024963 - symbol:GluClalpha "GluClalpha" species:7... 493 3.3e-49 2
WB|WBGene00001593 - symbol:glc-3 species:6239 "Caenorhabd... 286 1.0e-46 2
UNIPROTKB|Q14C71 - symbol:GLRA1 "GLRA1 protein" species:9... 242 3.8e-37 2
UNIPROTKB|F1MNR0 - symbol:GLRA3 "Uncharacterized protein"... 255 6.4e-37 2
UNIPROTKB|F1RJ16 - symbol:GLRA3 "Uncharacterized protein"... 255 6.4e-37 2
UNIPROTKB|E2QZJ3 - symbol:GLRA2 "Uncharacterized protein"... 250 7.1e-37 2
ZFIN|ZDB-GENE-020402-1 - symbol:glra3 "glycine receptor, ... 256 8.5e-37 2
UNIPROTKB|F1SQV0 - symbol:GLRA2 "Uncharacterized protein"... 250 1.2e-36 2
UNIPROTKB|K7GSI6 - symbol:GLRA2 "Uncharacterized protein"... 250 1.2e-36 2
UNIPROTKB|F1Q2X8 - symbol:GLRA3 "Uncharacterized protein"... 255 2.3e-36 2
UNIPROTKB|F1RQB7 - symbol:GLRA1 "Uncharacterized protein"... 242 3.6e-36 2
UNIPROTKB|F1NH12 - symbol:GLRA1 "Uncharacterized protein"... 242 4.1e-36 2
UNIPROTKB|E9PT06 - symbol:Glra1 "Glycine receptor subunit... 242 4.4e-36 2
UNIPROTKB|P57695 - symbol:GLRA1 "Glycine receptor subunit... 242 4.5e-36 2
UNIPROTKB|F1PC16 - symbol:GLRA1 "Uncharacterized protein"... 242 4.5e-36 2
UNIPROTKB|P23415 - symbol:GLRA1 "Glycine receptor subunit... 242 4.5e-36 2
MGI|MGI:95747 - symbol:Glra1 "glycine receptor, alpha 1 s... 242 4.5e-36 2
RGD|2704 - symbol:Glra1 "glycine receptor, alpha 1" speci... 242 4.5e-36 2
UNIPROTKB|J9P291 - symbol:GLRA3 "Uncharacterized protein"... 255 6.0e-36 2
UNIPROTKB|G5E5K0 - symbol:GLRA2 "Uncharacterized protein"... 250 7.2e-36 2
UNIPROTKB|F6Y3F7 - symbol:GLRA2 "Uncharacterized protein"... 250 7.2e-36 2
UNIPROTKB|P23416 - symbol:GLRA2 "Glycine receptor subunit... 250 7.2e-36 2
MGI|MGI:95748 - symbol:Glra2 "glycine receptor, alpha 2 s... 250 7.2e-36 2
UNIPROTKB|E2R7P3 - symbol:GLRA3 "Uncharacterized protein"... 255 7.9e-36 2
UNIPROTKB|O75311 - symbol:GLRA3 "Glycine receptor subunit... 255 7.9e-36 2
MGI|MGI:95749 - symbol:Glra3 "glycine receptor, alpha 3 s... 255 7.9e-36 2
RGD|621229 - symbol:Glra3 "glycine receptor, alpha 3" spe... 255 7.9e-36 2
ZFIN|ZDB-GENE-010410-3 - symbol:glra4a "glycine receptor,... 253 9.3e-36 2
UNIPROTKB|E1BTB5 - symbol:GLRA2 "Uncharacterized protein"... 248 1.5e-35 2
ZFIN|ZDB-GENE-020402-2 - symbol:glra4b "glycine receptor,... 255 2.6e-35 2
RGD|2705 - symbol:Glra2 "glycine receptor, alpha 2" speci... 242 5.9e-35 2
UNIPROTKB|P22771 - symbol:Glra2 "Glycine receptor subunit... 242 5.9e-35 2
UNIPROTKB|F1RYC5 - symbol:LOC100525376 "Uncharacterized p... 242 1.3e-34 2
UNIPROTKB|E2RCM7 - symbol:GLRA4 "Uncharacterized protein"... 242 1.3e-34 2
UNIPROTKB|F1NEM1 - symbol:GLRA4 "Uncharacterized protein"... 240 2.1e-34 2
RGD|1564103 - symbol:Glra4 "glycine receptor, alpha 4" sp... 240 2.2e-34 2
MGI|MGI:95750 - symbol:Glra4 "glycine receptor, alpha 4 s... 240 2.2e-34 2
UNIPROTKB|E1BHI1 - symbol:GLRA4 "Uncharacterized protein"... 240 2.2e-34 2
ZFIN|ZDB-GENE-991117-1 - symbol:glra1 "glycine receptor, ... 235 5.3e-34 2
UNIPROTKB|F1NMN1 - symbol:GLRA3 "Uncharacterized protein"... 233 2.4e-33 2
UNIPROTKB|Q5JXX5 - symbol:GLRA4 "Glycine receptor subunit... 221 1.4e-32 2
UNIPROTKB|C9JBL4 - symbol:GLRA2 "Glycine receptor subunit... 174 5.9e-29 2
ZFIN|ZDB-GENE-010410-2 - symbol:glrba "gylcine receptor, ... 221 2.9e-28 2
UNIPROTKB|F1MHX4 - symbol:F1MHX4 "Uncharacterized protein... 174 1.9e-27 2
UNIPROTKB|I3L720 - symbol:GABRA2 "Uncharacterized protein... 174 1.3e-26 2
UNIPROTKB|G5E9Z6 - symbol:GABRA2 "Gamma-aminobutyric acid... 174 1.3e-26 2
UNIPROTKB|P10063 - symbol:GABRA2 "Gamma-aminobutyric acid... 174 2.1e-26 2
UNIPROTKB|F1PEH3 - symbol:GABRA2 "Uncharacterized protein... 174 3.1e-26 2
UNIPROTKB|P47869 - symbol:GABRA2 "Gamma-aminobutyric acid... 174 3.3e-26 2
MGI|MGI:95614 - symbol:Gabra2 "gamma-aminobutyric acid (G... 174 3.3e-26 2
RGD|61856 - symbol:Gabra2 "gamma-aminobutyric acid (GABA)... 174 3.3e-26 2
UNIPROTKB|F1LNE8 - symbol:Gabra2 "Gamma-aminobutyric acid... 174 3.3e-26 2
UNIPROTKB|F1LMU7 - symbol:Gabra2 "Gamma-aminobutyric acid... 174 3.4e-26 2
UNIPROTKB|B7Z1H8 - symbol:GABRA2 "Gamma-aminobutyric acid... 174 3.5e-26 2
UNIPROTKB|F1NXA6 - symbol:GABRA2 "Uncharacterized protein... 174 3.6e-26 2
WB|WBGene00001587 - symbol:ggr-2 species:6239 "Caenorhabd... 197 4.4e-26 2
UNIPROTKB|E9PBQ7 - symbol:GABRA2 "Gamma-aminobutyric acid... 174 5.4e-26 2
WB|WBGene00000232 - symbol:avr-14 species:6239 "Caenorhab... 292 8.6e-26 1
ZFIN|ZDB-GENE-080722-20 - symbol:zgc:194845 "zgc:194845" ... 177 3.4e-25 2
ZFIN|ZDB-GENE-061013-194 - symbol:gabra1 "gamma-aminobuty... 171 1.1e-24 2
WB|WBGene00001592 - symbol:glc-2 species:6239 "Caenorhabd... 281 2.0e-24 1
UNIPROTKB|B7ZBQ7 - symbol:GABRR1 "Gamma-aminobutyric acid... 175 2.7e-24 2
UNIPROTKB|F1ND89 - symbol:GABRR1 "Uncharacterized protein... 174 2.9e-24 2
UNIPROTKB|F1NAX6 - symbol:GABRA3 "Uncharacterized protein... 171 3.1e-24 2
WB|WBGene00001591 - symbol:glc-1 species:6239 "Caenorhabd... 280 3.8e-24 1
UNIPROTKB|F1S0D1 - symbol:GABRR1 "Uncharacterized protein... 175 3.9e-24 2
UNIPROTKB|E1BCQ5 - symbol:GABRR1 "Uncharacterized protein... 175 3.9e-24 2
ZFIN|ZDB-GENE-040724-212 - symbol:gabrr1 "gamma-aminobuty... 173 4.7e-24 2
WB|WBGene00000233 - symbol:avr-15 species:6239 "Caenorhab... 283 6.2e-24 1
UNIPROTKB|P24046 - symbol:GABRR1 "Gamma-aminobutyric acid... 175 6.6e-24 2
RGD|61900 - symbol:Gabrr1 "gamma-aminobutyric acid (GABA)... 175 6.6e-24 2
UNIPROTKB|P50572 - symbol:Gabrr1 "Gamma-aminobutyric acid... 175 6.6e-24 2
MGI|MGI:95625 - symbol:Gabrr1 "gamma-aminobutyric acid (G... 175 6.6e-24 2
UNIPROTKB|E7EWG0 - symbol:GABRP "Gamma-aminobutyric acid ... 182 1.3e-23 2
UNIPROTKB|Q9UN88 - symbol:GABRQ "Gamma-aminobutyric acid ... 174 1.4e-23 2
ZFIN|ZDB-GENE-091204-365 - symbol:gabra3 "gamma-aminobuty... 167 2.6e-23 2
UNIPROTKB|F1MCS2 - symbol:GABRA3 "Gamma-aminobutyric acid... 169 3.9e-23 2
UNIPROTKB|P10064 - symbol:GABRA3 "Gamma-aminobutyric acid... 169 3.9e-23 2
UNIPROTKB|E2QVJ7 - symbol:GABRA3 "Uncharacterized protein... 169 3.9e-23 2
UNIPROTKB|P34903 - symbol:GABRA3 "Gamma-aminobutyric acid... 169 3.9e-23 2
UNIPROTKB|I3LPL5 - symbol:I3LPL5 "Uncharacterized protein... 169 4.8e-23 2
UNIPROTKB|F1NY45 - symbol:GABRP "Uncharacterized protein"... 193 6.8e-23 2
UNIPROTKB|E5RI57 - symbol:GABRP "Gamma-aminobutyric acid ... 182 7.2e-23 2
MGI|MGI:95615 - symbol:Gabra3 "gamma-aminobutyric acid (G... 169 1.3e-22 2
RGD|2648 - symbol:Gabra3 "gamma-aminobutyric acid (GABA) ... 169 1.3e-22 2
UNIPROTKB|P20236 - symbol:Gabra3 "Gamma-aminobutyric acid... 169 1.3e-22 2
MGI|MGI:95613 - symbol:Gabra1 "gamma-aminobutyric acid (G... 169 1.5e-22 2
RGD|61855 - symbol:Gabra1 "gamma-aminobutyric acid (GABA)... 169 1.5e-22 2
UNIPROTKB|P08219 - symbol:GABRA1 "Gamma-aminobutyric acid... 169 1.6e-22 2
UNIPROTKB|E2RSP8 - symbol:GABRA1 "Uncharacterized protein... 169 1.6e-22 2
UNIPROTKB|P14867 - symbol:GABRA1 "Gamma-aminobutyric acid... 169 1.6e-22 2
UNIPROTKB|F1RR71 - symbol:LOC100516706 "Uncharacterized p... 169 1.6e-22 2
UNIPROTKB|Q5EA06 - symbol:GABRP "Gamma-aminobutyric acid ... 185 2.4e-22 2
UNIPROTKB|P19150 - symbol:GABRA1 "Gamma-aminobutyric acid... 169 2.5e-22 2
UNIPROTKB|O00591 - symbol:GABRP "Gamma-aminobutyric acid ... 182 2.5e-22 2
UNIPROTKB|E2RS87 - symbol:GABRP "Uncharacterized protein"... 183 4.0e-22 2
UNIPROTKB|F1RRX8 - symbol:GABRP "Uncharacterized protein"... 181 6.7e-22 2
MGI|MGI:2387597 - symbol:Gabrp "gamma-aminobutyric acid (... 179 2.3e-21 2
RGD|620532 - symbol:Gabrp "gamma-aminobutyric acid (GABA-... 179 2.3e-21 2
UNIPROTKB|O09028 - symbol:Gabrp "Gamma-aminobutyric acid ... 179 2.3e-21 2
WARNING: Descriptions of 234 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0024963 [details] [associations]
symbol:GluClalpha "GluClalpha" species:7227 "Drosophila
melanogaster" [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=NAS;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048812
"neuron projection morphogenesis" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 EMBL:AE014297 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
eggNOG:NOG265706 KO:K05273 EMBL:U58776 EMBL:AJ002232 EMBL:AF297500
EMBL:AF297501 EMBL:DQ665648 RefSeq:NP_001014641.1
RefSeq:NP_001034061.1 RefSeq:NP_650827.2 RefSeq:NP_732447.1
UniGene:Dm.20644 ProteinModelPortal:Q94900 SMR:Q94900
MINT:MINT-813042 STRING:Q94900 TCDB:1.A.9.4.1 PaxDb:Q94900
GeneID:42350 KEGG:dme:Dmel_CG7535 UCSC:CG7535-RA CTD:42350
FlyBase:FBgn0024963 InParanoid:Q94900 OrthoDB:EOG42BVQV
GenomeRNAi:42350 NextBio:828361 Bgee:Q94900 GermOnline:CG7535
GO:GO:0008068 InterPro:IPR015680 PANTHER:PTHR18945:SF26
Uniprot:Q94900
Length = 456
Score = 493 (178.6 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 91/108 (84%), Positives = 98/108 (90%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F ++ Y ISLTL+CPMNLKLYPLDRQ CSL+MASYGWTT+DL+FLWKEGDPVQVV
Sbjct: 145 IFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVV 204
Query: 183 KNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
KNLHLPRFTLEKF TDYCNSKTNTG YSCLKVDLLFKREFSYYLIQIY
Sbjct: 205 KNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIY 252
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 68/97 (70%), Positives = 78/97 (80%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EYSVQLTFREQW DERLK++D GR+KYLTLTEA+RVWMPDLFFSNEKEGHFHNIIMPNV
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNV 141
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
YIRI P GSVLYSI + C +++ + R+ C
Sbjct: 142 YIRIFPNGSVLYSIR-ISLTLACPMNLKLYPLDRQIC 177
Score = 225 (84.3 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 44/62 (70%), Positives = 49/62 (79%)
Query: 77 LDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTR----SKRIDVISRITFPLVFALFNLTYW 132
L+ QCEVHM P+ P NCC++WL+KFPTR SKRIDVISRITFPLVFALFNL YW
Sbjct: 388 LEKRLQCEVHMQAPKRP--NCCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYW 445
Query: 133 ST 134
ST
Sbjct: 446 ST 447
Score = 37 (18.1 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 3 SVQLTFREQW---LDERLKYNDYDGRIK 27
+ ++ FRE+ LD+ L YD RI+
Sbjct: 24 NAKINFREKEKKVLDQILGAGKYDARIR 51
>WB|WBGene00001593 [details] [associations]
symbol:glc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR007110 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 PROSITE:PS50835
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:AJ243914
EMBL:FO081092 PIR:T29742 RefSeq:NP_504441.1 UniGene:Cel.18004
ProteinModelPortal:G5EEZ3 SMR:G5EEZ3 EnsemblMetazoa:ZC317.3
GeneID:178930 KEGG:cel:CELE_ZC317.3 CTD:178930 WormBase:ZC317.3
OMA:IPSTMLV NextBio:903170 Uniprot:G5EEZ3
Length = 484
Score = 286 (105.7 bits), Expect = 1.0e-46, Sum P(2) = 1.0e-46
Identities = 53/104 (50%), Positives = 72/104 (69%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLH-- 186
+ Y IS+ LSCPM+L+ YP+D Q+C + +ASY +T +D+ + WK+ DPVQ+ K LH
Sbjct: 149 ILYSVRISMVLSCPMHLQYYPMDVQTCLIDLASYAYTENDIEYRWKKTDPVQLKKGLHSS 208
Query: 187 LPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
LP F L T C SKTNTG YSCL+ L +R+FSYYL+Q+Y
Sbjct: 209 LPSFELNNVDTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLY 252
Score = 229 (85.7 bits), Expect = 1.0e-46, Sum P(2) = 1.0e-46
Identities = 44/88 (50%), Positives = 57/88 (64%)
Query: 1 EYSVQLTFREQWLDERLKYN-DYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EYSVQLTFRE+W+D RL Y D +L LT ++WMPD FF NEK+ H H+I PN
Sbjct: 79 EYSVQLTFREEWVDGRLAYGFPGDSTPDFLILTAGQQIWMPDSFFQNEKQAHKHDIDKPN 138
Query: 60 VYIRIHPQGSVLYSISDLDNMRQCEVHM 87
V IRIH G +LYS+ + + C +H+
Sbjct: 139 VLIRIHRDGRILYSVR-ISMVLSCPMHL 165
Score = 83 (34.3 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 109 SKRIDVISRITFPLVFALFNLTYWSTIS 136
+KR D+ISR+ FP +F FN YW+ S
Sbjct: 449 AKRADLISRVLFPTLFVCFNFVYWTKYS 476
>UNIPROTKB|Q14C71 [details] [associations]
symbol:GLRA1 "GLRA1 protein" species:9606 "Homo sapiens"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 UniGene:Hs.121490
HGNC:HGNC:4326 EMBL:AC091982 EMBL:AC010312 EMBL:BC114967
IPI:IPI01014809 SMR:Q14C71 STRING:Q14C71 Ensembl:ENST00000545569
UCSC:uc003lus.3 Uniprot:Q14C71
Length = 366
Score = 242 (90.2 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 70 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTL 129
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 130 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 173
Score = 174 (66.3 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 61
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 62 LLRISRNGNVLYSI 75
Score = 90 (36.7 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 325 FIQRAKKIDKISRIGFPMAFLIFNMFYW 352
>UNIPROTKB|F1MNR0 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:DAAA02021900
EMBL:DAAA02021901 IPI:IPI00923967 Ensembl:ENSBTAT00000061342
Uniprot:F1MNR0
Length = 375
Score = 255 (94.8 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W++ PVQV
Sbjct: 66 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVA 125
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 126 EGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 174
Score = 158 (60.7 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 3 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 62
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 63 LLRIFKNGNVLYSI 76
Score = 90 (36.7 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 334 FIDRAKKIDTISRACFPLAFLIFNIFYW 361
>UNIPROTKB|F1RJ16 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:CT737274 EMBL:CT841549
Ensembl:ENSSSCT00000010633 Uniprot:F1RJ16
Length = 376
Score = 255 (94.8 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W++ PVQV
Sbjct: 65 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVA 124
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 125 EGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 173
Score = 158 (60.7 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 2 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 61
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 62 LLRIFKNGNVLYSI 75
Score = 89 (36.4 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 333 FIDRAKKIDTISRACFPLAFLIFNVFYW 360
>UNIPROTKB|E2QZJ3 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
Ensembl:ENSCAFT00000018822 Uniprot:E2QZJ3
Length = 374
Score = 250 (93.1 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 162 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 221
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 222 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 163 (62.4 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 151 LLRISKNGKVLYSI 164
>ZFIN|ZDB-GENE-020402-1 [details] [associations]
symbol:glra3 "glycine receptor, alpha 3" species:7955
"Danio rerio" [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
ZFIN:ZDB-GENE-020402-1 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HSSP:P23415
KO:K05195 GO:GO:0016594 GO:GO:0022824 CTD:8001 EMBL:AJ308516
IPI:IPI00500173 RefSeq:NP_694497.1 UniGene:Dr.12384
ProteinModelPortal:Q90W14 SMR:Q90W14 GeneID:192124 KEGG:dre:192124
NextBio:20797134 Uniprot:Q90W14
Length = 450
Score = 256 (95.2 bits), Expect = 8.5e-37, Sum P(2) = 8.5e-37
Identities = 50/110 (45%), Positives = 74/110 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W+E PVQV
Sbjct: 153 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVA 212
Query: 183 KNLHLPRFTLEKFYTD--YCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L LP+F L K +D YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 DGLTLPQFIL-KDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 165 (63.1 bits), Expect = 8.5e-37, Sum P(2) = 8.5e-37
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK HFH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 150 LLRIFKNGNVLYSI 163
Score = 86 (35.3 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID +SR FPL F FN+ YW
Sbjct: 409 FIDRAKKIDTVSRAGFPLAFLFFNIFYW 436
>UNIPROTKB|F1SQV0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
OMA:TTLFAFF EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000013268
Uniprot:F1SQV0
Length = 385
Score = 250 (93.1 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 95 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 154
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 155 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 195
Score = 163 (62.4 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 24 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 83
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 84 LLRISKNGKVLYSI 97
Score = 106 (42.4 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 330 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 376
>UNIPROTKB|K7GSI6 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000033189
Uniprot:K7GSI6
Length = 385
Score = 250 (93.1 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 95 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 154
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 155 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 195
Score = 163 (62.4 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 24 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 83
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 84 LLRISKNGKVLYSI 97
Score = 106 (42.4 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 330 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 376
>UNIPROTKB|F1Q2X8 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 EMBL:AAEX03014316
Ensembl:ENSCAFT00000012641 Ensembl:ENSCAFT00000043558
Uniprot:F1Q2X8
Length = 409
Score = 255 (94.8 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W++ PVQV
Sbjct: 113 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVA 172
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 173 EGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 221
Score = 158 (60.7 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 50 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 109
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 110 LLRIFKNGNVLYSI 123
Score = 90 (36.7 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 366 FIDRAKKIDTISRACFPLAFLIFNIFYW 393
>UNIPROTKB|F1RQB7 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000344 "positive regulation of acrosome reaction"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0030977 "taurine binding"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001508 "regulation of action
potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
GeneTree:ENSGT00550000074453 OMA:NTANPVP GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
EMBL:CU570659 EMBL:CU463090 Ensembl:ENSSSCT00000018594
Uniprot:F1RQB7
Length = 443
Score = 242 (90.2 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 140 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTL 199
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 200 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 243
Score = 174 (66.3 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 72 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 131
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 132 LLRISRNGNVLYSI 145
Score = 90 (36.7 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 402 FIQRAKKIDKISRIGFPMAFLIFNMFYW 429
>UNIPROTKB|F1NH12 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001508
"regulation of action potential" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0006936
"muscle contraction" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0030977 "taurine binding" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0060012 "synaptic transmission,
glycinergic" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:2000344 "positive regulation
of acrosome reaction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0001508
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0043576
GO:GO:2000344 GeneTree:ENSGT00550000074453 OMA:NTANPVP
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
EMBL:AADN02028653 IPI:IPI00580687 Ensembl:ENSGALT00000034504
Uniprot:F1NH12
Length = 452
Score = 242 (90.2 bits), Expect = 4.1e-36, Sum P(2) = 4.1e-36
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 156 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTL 215
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 216 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 259
Score = 174 (66.3 bits), Expect = 4.1e-36, Sum P(2) = 4.1e-36
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 88 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 147
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 148 LLRISRNGNVLYSI 161
Score = 90 (36.7 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 411 FIQRAKKIDKISRIGFPMAFLIFNIFYW 438
>UNIPROTKB|E9PT06 [details] [associations]
symbol:Glra1 "Glycine receptor subunit alpha-1"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 RGD:2704
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884 GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
IPI:IPI01007606 Ensembl:ENSRNOT00000066564 ArrayExpress:E9PT06
Uniprot:E9PT06
Length = 456
Score = 242 (90.2 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 153 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTL 212
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 213 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 174 (66.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 145 LLRISRNGNVLYSI 158
Score = 90 (36.7 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 417 FIQRAKKIDKISRIGFPMAFLIFNMFYW 444
>UNIPROTKB|P57695 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9913 "Bos taurus" [GO:0016594 "glycine binding"
evidence=ISS] [GO:0006936 "muscle contraction" evidence=ISS]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0001964 "startle
response" evidence=ISS] [GO:0051970 "negative regulation of
transmission of nerve impulse" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISS]
[GO:0030977 "taurine binding" evidence=ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IEA] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 EMBL:AF268375 EMBL:AF268366
EMBL:AF268358 EMBL:AF268360 EMBL:AF268361 EMBL:AF268359
EMBL:AF268362 EMBL:AF268364 EMBL:AF268365 EMBL:AF268363
IPI:IPI00700898 IPI:IPI00807328 RefSeq:NP_776746.1 UniGene:Bt.5559
ProteinModelPortal:P57695 SMR:P57695 PRIDE:P57695
Ensembl:ENSBTAT00000019143 GeneID:281783 KEGG:bta:281783 CTD:2741
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 InParanoid:P57695
KO:K05193 OMA:NTANPVP OrthoDB:EOG4TF0KF NextBio:20805696
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
GO:GO:0060012 Uniprot:P57695
Length = 457
Score = 242 (90.2 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 153 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTL 212
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 213 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 174 (66.3 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 145 LLRISRNGNVLYSI 158
Score = 90 (36.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>UNIPROTKB|F1PC16 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 CTD:2741
GeneTree:ENSGT00550000074453 KO:K05193 OMA:NTANPVP GO:GO:0016594
GO:GO:0022824 EMBL:AAEX03003083 RefSeq:XP_003434572.1
Ensembl:ENSCAFT00000028284 GeneID:489172 KEGG:cfa:489172
Uniprot:F1PC16
Length = 457
Score = 242 (90.2 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 153 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTL 212
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 213 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 174 (66.3 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 145 LLRISRNGNVLYSI 158
Score = 90 (36.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>UNIPROTKB|P23415 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051291
"protein heterooligomerization" evidence=IEA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IGI;IMP;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IMP;IDA;NAS] [GO:0006811 "ion transport" evidence=IDA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IDA]
[GO:0030977 "taurine binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001964 "startle response" evidence=IMP]
[GO:0006821 "chloride transport" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0006936 "muscle contraction" evidence=IMP] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=IMP]
[GO:0016594 "glycine binding" evidence=IDA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 EMBL:CH471062 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0042391 GO:GO:0001508
GO:GO:0006936 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
DrugBank:DB00145 DrugBank:DB01159 GO:GO:0034707 GO:GO:0007628
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706 Orphanet:3197
CTD:2741 HOGENOM:HOG000231336 KO:K05193 OMA:NTANPVP
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:X52009 EMBL:AK312702 EMBL:BC074980
EMBL:BC114947 IPI:IPI00011565 IPI:IPI00795343 PIR:S12382
RefSeq:NP_000162.2 RefSeq:NP_001139512.1 UniGene:Hs.121490 PDB:1MOT
PDB:1VRY PDBsum:1MOT PDBsum:1VRY ProteinModelPortal:P23415
SMR:P23415 DIP:DIP-48768N STRING:P23415 TCDB:1.A.9.3.1
PhosphoSite:P23415 DMDM:116242495 PRIDE:P23415
Ensembl:ENST00000274576 Ensembl:ENST00000455880 GeneID:2741
KEGG:hsa:2741 UCSC:uc003lur.3 UCSC:uc003lut.3 GeneCards:GC05M151182
HGNC:HGNC:4326 HPA:HPA016502 MIM:138491 MIM:149400
neXtProt:NX_P23415 PharmGKB:PA28727 InParanoid:P23415
BindingDB:P23415 ChEMBL:CHEMBL5845 EvolutionaryTrace:P23415
GenomeRNAi:2741 NextBio:10804 ArrayExpress:P23415 Bgee:P23415
CleanEx:HS_GLRA1 Genevestigator:P23415 GermOnline:ENSG00000145888
Uniprot:P23415
Length = 457
Score = 242 (90.2 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 153 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTL 212
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 213 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 174 (66.3 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 145 LLRISRNGNVLYSI 158
Score = 90 (36.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>MGI|MGI:95747 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1 subunit" species:10090
"Mus musculus" [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001964 "startle response" evidence=ISO;IMP]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006820
"anion transport" evidence=ISO] [GO:0006821 "chloride transport"
evidence=ISO;IMP;IDA] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007340 "acrosome reaction" evidence=IMP] [GO:0007601 "visual
perception" evidence=IMP] [GO:0007628 "adult walking behavior"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;IDA;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO;IMP;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO;IMP;IDA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=ISO;IMP;IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IMP] [GO:0050905
"neuromuscular process" evidence=IMP] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=ISO]
[GO:0060012 "synaptic transmission, glycinergic" evidence=ISO;IMP]
[GO:0060013 "righting reflex" evidence=IMP] [GO:0060080 "regulation
of inhibitory postsynaptic membrane potential" evidence=IMP]
[GO:2000344 "positive regulation of acrosome reaction"
evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674
PROSITE:PS00236 MGI:MGI:95747 GO:GO:0043231 GO:GO:0005887
GO:GO:0009897 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0002087
GO:GO:0060080 GO:GO:0001508 GO:GO:0006936 GO:GO:0016934
GO:GO:0007340 GO:GO:0060013 GO:GO:0034707 GO:GO:0007628
EMBL:AL596207 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 OMA:NTANPVP GO:GO:0016594 GO:GO:0030977
GO:GO:0022824 GO:GO:0051970 GO:GO:0060012 EMBL:S73717 EMBL:S73718
EMBL:X75832 EMBL:X75833 EMBL:X75834 EMBL:X75835 EMBL:X75836
EMBL:X75837 EMBL:X75838 EMBL:X75839 EMBL:X75840 IPI:IPI00405549
IPI:IPI00466207 PIR:C49970 UniGene:Mm.89320
ProteinModelPortal:Q64018 SMR:Q64018 STRING:Q64018
PhosphoSite:Q64018 PRIDE:Q64018 Ensembl:ENSMUST00000075603
Ensembl:ENSMUST00000102716 InParanoid:Q5NCT8 Bgee:Q64018
CleanEx:MM_GLRA1 Genevestigator:Q64018
GermOnline:ENSMUSG00000000263 Uniprot:Q64018
Length = 457
Score = 242 (90.2 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 153 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTL 212
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 213 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 174 (66.3 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 145 LLRISRNGNVLYSI 158
Score = 90 (36.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>RGD|2704 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001508 "regulation of action potential"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA;ISO] [GO:0005622
"intracellular" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO;ISS] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006820 "anion transport" evidence=IDA] [GO:0006821 "chloride
transport" evidence=ISO;ISS;IDA] [GO:0006936 "muscle contraction"
evidence=ISO;ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO;ISS] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007340 "acrosome reaction" evidence=IEA;ISO] [GO:0007601 "visual
perception" evidence=IEA;ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0009897 "external side of plasma membrane"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016594 "glycine binding" evidence=ISO;ISS;IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IDA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISO;ISS;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO;ISS] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO;ISS] [GO:0043576 "regulation of respiratory gaseous
exchange" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA;ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0051260 "protein homooligomerization" evidence=IDA]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0051970
"negative regulation of transmission of nerve impulse"
evidence=ISO;ISS] [GO:0060012 "synaptic transmission, glycinergic"
evidence=ISO;IDA] [GO:0060013 "righting reflex" evidence=IEA;ISO]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:2000344 "positive regulation of
acrosome reaction" evidence=IEA;ISO] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01674 PROSITE:PS00236 RGD:2704 GO:GO:0005783 GO:GO:0051291
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0051260 GO:GO:0006936
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
eggNOG:NOG265706 CTD:2741 HOGENOM:HOG000231336 KO:K05193
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:D00833 EMBL:X55246 EMBL:M63915
EMBL:AJ310835 EMBL:Y00276 IPI:IPI00206855 IPI:IPI00324218 PIR:JN0014
PIR:S20662 RefSeq:NP_037265.1 UniGene:Rn.10109
ProteinModelPortal:P07727 SMR:P07727 DIP:DIP-48879N STRING:P07727
Ensembl:ENSRNOT00000063889 GeneID:25674 KEGG:rno:25674 UCSC:RGD:2704
InParanoid:P07727 BindingDB:P07727 ChEMBL:CHEMBL3246 NextBio:607619
ArrayExpress:P07727 Genevestigator:P07727
GermOnline:ENSRNOG00000013588 Uniprot:P07727
Length = 457
Score = 242 (90.2 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+LTL+CPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV L L
Sbjct: 153 NVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTL 212
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 213 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 256
Score = 174 (66.3 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 34/74 (45%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL YN+Y L + +W PDLFF+NEK HFH I N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNK 144
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 145 LLRISRNGNVLYSI 158
Score = 90 (36.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISRI FP+ F +FN+ YW
Sbjct: 416 FIQRAKKIDKISRIGFPMAFLIFNMFYW 443
>UNIPROTKB|J9P291 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AAEX03014316 GeneID:486074 KEGG:cfa:486074
RefSeq:XP_003433410.1 Ensembl:ENSCAFT00000049653 Uniprot:J9P291
Length = 449
Score = 255 (94.8 bits), Expect = 6.0e-36, Sum P(2) = 6.0e-36
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W++ PVQV
Sbjct: 153 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVA 212
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 EGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 158 (60.7 bits), Expect = 6.0e-36, Sum P(2) = 6.0e-36
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 150 LLRIFKNGNVLYSI 163
Score = 90 (36.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 406 FIDRAKKIDTISRACFPLAFLIFNIFYW 433
>UNIPROTKB|G5E5K0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:2742
KO:K05194 OMA:TTLFAFF EMBL:DAAA02074899 EMBL:DAAA02074900
RefSeq:NP_001179843.1 UniGene:Bt.74452 ProteinModelPortal:G5E5K0
Ensembl:ENSBTAT00000022869 GeneID:537660 KEGG:bta:537660
NextBio:20877182 Uniprot:G5E5K0
Length = 452
Score = 250 (93.1 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 162 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 221
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 222 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 163 (62.4 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 151 LLRISKNGKVLYSI 164
Score = 106 (42.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 397 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 443
>UNIPROTKB|F6Y3F7 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF
Ensembl:ENSCAFT00000018822 EMBL:AAEX03026154 RefSeq:XP_003435502.1
RefSeq:XP_548866.2 ProteinModelPortal:F6Y3F7 GeneID:491746
KEGG:cfa:491746 Uniprot:F6Y3F7
Length = 452
Score = 250 (93.1 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 162 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 221
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 222 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 163 (62.4 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 151 LLRISKNGKVLYSI 164
Score = 106 (42.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 397 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 443
>UNIPROTKB|P23416 [details] [associations]
symbol:GLRA2 "Glycine receptor subunit alpha-2"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=NAS] [GO:0006811 "ion transport"
evidence=IDA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IDA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
EMBL:U77731 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 EMBL:CH471074
GO:GO:0007416 GO:GO:0016934 DrugBank:DB00145 GO:GO:0034707
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0022824 TCDB:1.A.9.3.1
EMBL:X52008 EMBL:AF053495 EMBL:AF053487 EMBL:AF053488 EMBL:AF053489
EMBL:AF053490 EMBL:AF053491 EMBL:AF053492 EMBL:AF053493
EMBL:AF053494 EMBL:AY437083 EMBL:AY437084 EMBL:CR450343
EMBL:AK289561 EMBL:AK297304 EMBL:AK312591 EMBL:AC003658
EMBL:AC003683 EMBL:BC032864 EMBL:U77724 EMBL:U77725 EMBL:U77726
EMBL:U77727 EMBL:U77728 EMBL:U77729 EMBL:U77730 IPI:IPI00011566
IPI:IPI00220450 PIR:S12381 RefSeq:NP_001112357.1
RefSeq:NP_001112358.1 RefSeq:NP_001165413.1 RefSeq:NP_002054.1
UniGene:Hs.2700 ProteinModelPortal:P23416 SMR:P23416 IntAct:P23416
MINT:MINT-1412636 STRING:P23416 PhosphoSite:P23416 DMDM:121578
PRIDE:P23416 DNASU:2742 Ensembl:ENST00000218075
Ensembl:ENST00000355020 Ensembl:ENST00000443437 GeneID:2742
KEGG:hsa:2742 UCSC:uc004cwe.4 UCSC:uc010nep.3 CTD:2742
GeneCards:GC0XP014457 H-InvDB:HIX0016955 HGNC:HGNC:4327 MIM:305990
neXtProt:NX_P23416 PharmGKB:PA28728 InParanoid:P23416 KO:K05194
OMA:TTLFAFF OrthoDB:EOG4WWRJJ PhylomeDB:P23416 BindingDB:P23416
ChEMBL:CHEMBL5871 ChiTaRS:GLRA2 GenomeRNAi:2742 NextBio:10808
ArrayExpress:P23416 Bgee:P23416 CleanEx:HS_GLRA2
Genevestigator:P23416 GermOnline:ENSG00000101958 Uniprot:P23416
Length = 452
Score = 250 (93.1 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 162 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 221
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 222 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 163 (62.4 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 151 LLRISKNGKVLYSI 164
Score = 106 (42.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
+PQ P+ KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 397 LPQPPKDGDAIK--KKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 443
>MGI|MGI:95748 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
MGI:MGI:95748 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:BC056342
EMBL:BC068987 IPI:IPI00270265 RefSeq:NP_906272.1 UniGene:Mm.113877
ProteinModelPortal:Q7TNC8 SMR:Q7TNC8 STRING:Q7TNC8
PhosphoSite:Q7TNC8 PRIDE:Q7TNC8 Ensembl:ENSMUST00000058787
GeneID:237213 KEGG:mmu:237213 InParanoid:Q7TNC8 NextBio:383251
Bgee:Q7TNC8 CleanEx:MM_GLRA2 Genevestigator:Q7TNC8
GermOnline:ENSMUSG00000018589 Uniprot:Q7TNC8
Length = 452
Score = 250 (93.1 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 162 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 221
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 222 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 163 (62.4 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 151 LLRISKNGKVLYSI 164
Score = 106 (42.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 397 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 443
>UNIPROTKB|E2R7P3 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
OMA:PKNSDEM EMBL:AAEX03014316 RefSeq:XP_543200.2
ProteinModelPortal:E2R7P3 Ensembl:ENSCAFT00000012633 GeneID:486074
KEGG:cfa:486074 NextBio:20859920 Uniprot:E2R7P3
Length = 464
Score = 255 (94.8 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W++ PVQV
Sbjct: 153 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVA 212
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 EGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 158 (60.7 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 150 LLRIFKNGNVLYSI 163
Score = 90 (36.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 421 FIDRAKKIDTISRACFPLAFLIFNIFYW 448
>UNIPROTKB|O75311 [details] [associations]
symbol:GLRA3 "Glycine receptor subunit alpha-3"
species:9606 "Homo sapiens" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
EMBL:AF017724 GO:GO:0016021 GO:GO:0005886 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 EMBL:CH471056
DrugBank:DB00145 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
KO:K05195 HOGENOM:HOG000231336 OrthoDB:EOG4TF0KF GO:GO:0016594
GO:GO:0022824 TCDB:1.A.9.3.1 EMBL:AF017715 EMBL:AF017716
EMBL:AF017717 EMBL:AF017718 EMBL:AF017719 EMBL:AF017720
EMBL:AF017721 EMBL:AF017722 EMBL:AF017723 EMBL:U93917 EMBL:BC036086
IPI:IPI00025243 IPI:IPI00216193 RefSeq:NP_001036008.1
RefSeq:NP_006520.2 UniGene:Hs.413099 ProteinModelPortal:O75311
SMR:O75311 STRING:O75311 PhosphoSite:O75311 PRIDE:O75311 DNASU:8001
Ensembl:ENST00000274093 Ensembl:ENST00000340217 GeneID:8001
KEGG:hsa:8001 UCSC:uc003ity.1 UCSC:uc003itz.1 CTD:8001
GeneCards:GC04M175558 HGNC:HGNC:4328 HPA:HPA014805 MIM:600421
neXtProt:NX_O75311 PharmGKB:PA28729 InParanoid:O75311 OMA:PKNSDEM
PhylomeDB:O75311 BindingDB:O75311 ChEMBL:CHEMBL1075092
GenomeRNAi:8001 NextBio:30552 ArrayExpress:O75311 Bgee:O75311
CleanEx:HS_GLRA3 Genevestigator:O75311 GermOnline:ENSG00000145451
Uniprot:O75311
Length = 464
Score = 255 (94.8 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W++ PVQV
Sbjct: 153 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVA 212
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 EGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 158 (60.7 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 150 LLRIFKNGNVLYSI 163
Score = 90 (36.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 421 FIDRAKKIDTISRACFPLAFLIFNIFYW 448
>MGI|MGI:95749 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
MGI:MGI:95749 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 KO:K05195 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AF362764 EMBL:AY230204 IPI:IPI00380761 RefSeq:NP_536686.2
UniGene:Mm.307061 ProteinModelPortal:Q91XP5 SMR:Q91XP5
STRING:Q91XP5 PhosphoSite:Q91XP5 PaxDb:Q91XP5 PRIDE:Q91XP5
DNASU:110304 GeneID:110304 KEGG:mmu:110304 UCSC:uc009ujb.2
InParanoid:Q91XP5 NextBio:363729 Bgee:Q91XP5 CleanEx:MM_GLRA3
Genevestigator:Q91XP5 GermOnline:ENSMUSG00000038257 Uniprot:Q91XP5
Length = 464
Score = 255 (94.8 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W++ PVQV
Sbjct: 153 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVA 212
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 EGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 158 (60.7 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 150 LLRIFKNGNVLYSI 163
Score = 90 (36.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 421 FIDRAKKIDTISRACFPLAFLIFNIFYW 448
>RGD|621229 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008130 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676
PROSITE:PS00236 RGD:621229 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 GO:GO:0016594 GO:GO:0022824
EMBL:M55250 IPI:IPI00392219 PIR:A23682 UniGene:Rn.10038
ProteinModelPortal:P24524 SMR:P24524 BindingDB:P24524
ChEMBL:CHEMBL2677 Genevestigator:P24524 Uniprot:P24524
Length = 464
Score = 255 (94.8 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++LTLSCPM+LK +P+D Q+C +++ S+G+T +DLIF W++ PVQV
Sbjct: 153 IFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVA 212
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 EGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMY 261
Score = 158 (60.7 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R++W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 150 LLRIFKNGNVLYSI 163
Score = 90 (36.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 421 FIDRAKKIDTISRACFPLAFLIFNIFYW 448
>ZFIN|ZDB-GENE-010410-3 [details] [associations]
symbol:glra4a "glycine receptor, alpha 4a"
species:7955 "Danio rerio" [GO:0016594 "glycine binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-010410-3 GO:GO:0045664
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934 GO:GO:0043200
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:BC090676
EMBL:GQ406229 IPI:IPI00496864 UniGene:Dr.82595 SMR:Q5CZW5
Uniprot:Q5CZW5
Length = 457
Score = 253 (94.1 bits), Expect = 9.3e-36, Sum P(2) = 9.3e-36
Identities = 47/109 (43%), Positives = 73/109 (66%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DLIF W +PVQV
Sbjct: 154 IFQNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVA 213
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 214 DDLTLPQFVLKEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 159 (61.0 bits), Expect = 9.3e-36, Sum P(2) = 9.3e-36
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y + + R+QW D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 91 DYRLNVFLRQQWNDPRLAYSEYPDASLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 151 LLRIFQNGNVLYSI 164
Score = 97 (39.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 104 KFPTRSKRIDVISRITFPLVFALFNLTYWST 134
+F R+KRID ISR FPL F +FN+ YW T
Sbjct: 414 RFVDRAKRIDTISRAVFPLSFLIFNVFYWIT 444
>UNIPROTKB|E1BTB5 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF EMBL:AADN02011338
EMBL:AADN02011339 EMBL:AADN02011340 EMBL:AADN02011341
IPI:IPI00575771 RefSeq:XP_003640566.1 Ensembl:ENSGALT00000026747
GeneID:772019 KEGG:gga:772019 Uniprot:E1BTB5
Length = 452
Score = 248 (92.4 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 46/101 (45%), Positives = 68/101 (67%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 162 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 221
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 222 ILKEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 162 (62.1 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 151 LLRISKTGKVLYSI 164
Score = 107 (42.7 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 90 PQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
P P K+ S KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 397 PPAPPKDS-DSIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 443
>ZFIN|ZDB-GENE-020402-2 [details] [associations]
symbol:glra4b "glycine receptor, alpha 4b"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-020402-2 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 EMBL:BX470076 IPI:IPI00998123
ProteinModelPortal:F1QTT1 Ensembl:ENSDART00000006474
ArrayExpress:F1QTT1 Uniprot:F1QTT1
Length = 537
Score = 255 (94.8 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 47/109 (43%), Positives = 73/109 (66%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DLIF W + PVQV
Sbjct: 198 IFQNGNVLYSIRLTLILSCPMDLKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVA 257
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+L LP+F L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 258 DDLMLPQFVLKEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 306
Score = 157 (60.3 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y + + R+QW D RL Y +Y L + +W PDLFF+NEK +FH + N
Sbjct: 135 DYRLNVFLRQQWNDPRLAYKEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 194
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 195 LLRIFQNGNVLYSI 208
Score = 99 (39.9 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 104 KFPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLKLYP 149
+F ++KRID ISR FPL F +FN+ YW T + + ++L L P
Sbjct: 492 RFVEQAKRIDTISRAVFPLSFLVFNVFYWVTYKVLRNEDIHLALRP 537
>RGD|2705 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=ISO] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA;ISO] [GO:0007416 "synapse assembly"
evidence=IEP] [GO:0016594 "glycine binding" evidence=IEA;ISO]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA;ISO;TAS] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01675 PROSITE:PS00236 RGD:2705 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543 PIR:S14816
PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1 UniGene:Rn.10379
ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187 ArrayExpress:P22771
Genevestigator:P22771 GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 242 (90.2 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 45/101 (44%), Positives = 68/101 (67%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+ +T +DLIF W PVQV + L LP+F
Sbjct: 162 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQF 221
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 222 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 163 (62.4 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 151 LLRISKNGKVLYSI 164
Score = 106 (42.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 397 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 443
>UNIPROTKB|P22771 [details] [associations]
symbol:Glra2 "Glycine receptor subunit alpha-2"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 RGD:2705
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416 GO:GO:0016934
GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543
PIR:S14816 PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1
UniGene:Rn.10379 ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187
ArrayExpress:P22771 Genevestigator:P22771
GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 242 (90.2 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 45/101 (44%), Positives = 68/101 (67%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+ +T +DLIF W PVQV + L LP+F
Sbjct: 162 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQF 221
Query: 191 TL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L E+ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 222 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 163 (62.4 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 151 LLRISKNGKVLYSI 164
Score = 106 (42.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTISL 137
+PQ P+ + KF R+KRID ISR FPL F +FN+ YW T +
Sbjct: 397 LPQPPKD--ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKI 443
>UNIPROTKB|F1RYC5 [details] [associations]
symbol:LOC100525376 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 KO:K05271 EMBL:FP015842 EMBL:FP326726
RefSeq:XP_003135319.1 UniGene:Ssc.93565 Ensembl:ENSSSCT00000013704
GeneID:100525376 KEGG:ssc:100525376 OMA:FYFASLC Uniprot:F1RYC5
Length = 457
Score = 242 (90.2 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 46/110 (41%), Positives = 73/110 (66%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DL+F W E P VQV
Sbjct: 154 IFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQV 213
Query: 182 VKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L ++ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 214 AEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 263
Score = 160 (61.4 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y +Y L + +W PDLFF+NEK +FH + N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 151 LLRIFKNGNVLYSI 164
Score = 84 (34.6 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 108 RSKRIDVISRITFPLVFALFNLTYW 132
++KRID ISR FP F +FN+ YW
Sbjct: 418 QAKRIDTISRAVFPFTFLIFNIFYW 442
>UNIPROTKB|E2RCM7 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:441509 KO:K05271 OMA:IQESRFY
EMBL:AAEX03026730 RefSeq:XP_549155.2 ProteinModelPortal:E2RCM7
Ensembl:ENSCAFT00000028247 GeneID:492035 KEGG:cfa:492035
NextBio:20864703 Uniprot:E2RCM7
Length = 457
Score = 242 (90.2 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 46/110 (41%), Positives = 73/110 (66%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DL+F W E P VQV
Sbjct: 154 IFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQV 213
Query: 182 VKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L ++ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 214 AEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 263
Score = 160 (61.4 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y +Y L + +W PDLFF+NEK +FH + N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYQEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 151 LLRIFKNGNVLYSI 164
Score = 77 (32.2 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 108 RSKRIDVISRITFPLVFALFNLTYW 132
++K+ID ISR FP F +FN YW
Sbjct: 418 QAKQIDTISRAVFPFTFLIFNTFYW 442
>UNIPROTKB|F1NEM1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 OMA:FYFASLC EMBL:AADN02013212 IPI:IPI00580780
Ensembl:ENSGALT00000007899 Uniprot:F1NEM1
Length = 453
Score = 240 (89.5 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 46/110 (41%), Positives = 74/110 (67%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW-KEGDPVQV 181
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DLIF W +E + VQV
Sbjct: 151 IFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQV 210
Query: 182 VKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L ++ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 211 AEGLTLPQFILRDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMY 260
Score = 160 (61.4 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y +Y L + +W PDLFF+NEK +FH + N
Sbjct: 88 DYRVNVFLRQQWNDPRLAYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 147
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 148 LLRIFKNGNVLYSI 161
Score = 89 (36.4 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 104 KFPTRSKRIDVISRITFPLVFALFNLTYW 132
++ R+KRID ISR FP F +FN+ YW
Sbjct: 410 RYVDRAKRIDTISRAVFPFTFLVFNIFYW 438
>RGD|1564103 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4" species:10116 "Rattus
norvegicus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 RGD:1564103
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
OMA:IQESRFY IPI:IPI00361637 RefSeq:NP_001178843.1 UniGene:Rn.228202
ProteinModelPortal:D4A4R5 Ensembl:ENSRNOT00000052302 GeneID:367912
KEGG:rno:367912 UCSC:RGD:1564103 NextBio:691840 ArrayExpress:D4A4R5
Uniprot:D4A4R5
Length = 456
Score = 240 (89.5 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 46/110 (41%), Positives = 73/110 (66%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DL+F W E P VQV
Sbjct: 153 IFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQV 212
Query: 182 VKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L ++ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 AEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 160 (61.4 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y +Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 150 LLRIFKNGNVLYSI 163
Score = 87 (35.7 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 108 RSKRIDVISRITFPLVFALFNLTYW 132
R+KRID ISR FP F +FN+ YW
Sbjct: 417 RAKRIDTISRAVFPFTFLVFNIFYW 441
>MGI|MGI:95750 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 MGI:MGI:95750 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG265706 GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
EMBL:DQ109809 EMBL:AL671887 EMBL:X75850 EMBL:X75851 EMBL:X75852
EMBL:X75853 EMBL:AF462147 IPI:IPI00474759 PIR:A49970
RefSeq:NP_034427.2 UniGene:Mm.215168 ProteinModelPortal:Q61603
SMR:Q61603 PhosphoSite:Q61603 PRIDE:Q61603
Ensembl:ENSMUST00000018739 GeneID:14657 KEGG:mmu:14657
UCSC:uc007izn.1 InParanoid:A2AEA9 BindingDB:Q61603
ChEMBL:CHEMBL3500 NextBio:286518 Bgee:Q61603 CleanEx:MM_GLRA4
Genevestigator:Q61603 GermOnline:ENSMUSG00000018595 Uniprot:Q61603
Length = 456
Score = 240 (89.5 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 46/110 (41%), Positives = 73/110 (66%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DL+F W E P VQV
Sbjct: 153 IFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQV 212
Query: 182 VKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L ++ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 213 AEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 262
Score = 160 (61.4 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y +Y L + +W PDLFF+NEK +FH + N
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 150 LLRIFKNGNVLYSI 163
>UNIPROTKB|E1BHI1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:IQESRFY EMBL:DAAA02071337
EMBL:DAAA02071338 IPI:IPI00708020 Ensembl:ENSBTAT00000022870
Uniprot:E1BHI1
Length = 457
Score = 240 (89.5 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 46/110 (41%), Positives = 73/110 (66%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F N+ Y ++L LSCPM+LK +P+D Q+C++++ S+G+T +DL+F W E P VQV
Sbjct: 154 IFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQV 213
Query: 182 VKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L ++ YC NTG ++C++V +R+ YYLIQ+Y
Sbjct: 214 AEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 263
Score = 160 (61.4 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y +Y L + +W PDLFF+NEK +FH + N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 151 LLRIFKNGNVLYSI 164
>ZFIN|ZDB-GENE-991117-1 [details] [associations]
symbol:glra1 "glycine receptor, alpha 1" species:7955
"Danio rerio" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005254 "chloride
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
ZFIN:ZDB-GENE-991117-1 GO:GO:0045664 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934
GO:GO:0043200 HOVERGEN:HBG051707 HSSP:P23415 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 EMBL:AF488379
IPI:IPI00486644 UniGene:Dr.75842 ProteinModelPortal:Q8QG93
SMR:Q8QG93 PRIDE:Q8QG93 InParanoid:Q8QG93 ArrayExpress:Q8QG93
Bgee:Q8QG93 Uniprot:Q8QG93
Length = 459
Score = 235 (87.8 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 45/104 (43%), Positives = 67/104 (64%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
N+ Y I+L L+CPM+LK +P+D Q+C +++ S+G+T +DLIF W E VQV L L
Sbjct: 164 NVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTL 223
Query: 188 PRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
P+F L E+ YC NTG ++C++ +R+ YYLIQ+Y
Sbjct: 224 PQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 267
Score = 162 (62.1 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 96 DYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 155
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 156 LLRISKNGNVLYSI 169
Score = 108 (43.1 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYWSTISLTLS 140
F +R+KRID +SR+ FPLVF +FN+ YW T + S
Sbjct: 418 FISRAKRIDTVSRVAFPLVFLIFNIFYWITYKIIRS 453
>UNIPROTKB|F1NMN1 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008130 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824
EMBL:AC145915 IPI:IPI00572144 Ensembl:ENSGALT00000017534
OMA:HANFHEV Uniprot:F1NMN1
Length = 444
Score = 233 (87.1 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 47/111 (42%), Positives = 72/111 (64%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
+F N+ Y ++L LSCPM+LK +P+D Q+C +++ S+G+T +DLIF W+E VQV
Sbjct: 148 IFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVA 207
Query: 183 KNLHLPRFTL-EKFYTDYCNSKTNT--GAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L E+ YC NT G ++C++V +R+ YYLIQ+Y
Sbjct: 208 EGLTLPQFLLKEEKDLCYCTKHYNTEKGKFTCIEVRFHLERQMGYYLIQMY 258
Score = 157 (60.3 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+ W D RL Y++Y L + +W PDLFF+NEK +FH + N
Sbjct: 85 DYRVNIFLRQNWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 144
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 145 LLRIFKNGNVLYSI 158
Score = 90 (36.7 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 105 FPTRSKRIDVISRITFPLVFALFNLTYW 132
F R+K+ID ISR FPL F +FN+ YW
Sbjct: 404 FIDRAKKIDTISRACFPLAFLIFNIFYW 431
>UNIPROTKB|Q5JXX5 [details] [associations]
symbol:GLRA4 "Glycine receptor subunit alpha-4"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:Z93848
EMBL:AL049610 IPI:IPI00456931 RefSeq:NP_001019623.2
UniGene:Hs.533289 ProteinModelPortal:Q5JXX5 SMR:Q5JXX5
STRING:Q5JXX5 PhosphoSite:Q5JXX5 DMDM:262527577 PRIDE:Q5JXX5
Ensembl:ENST00000372617 GeneID:441509 KEGG:hsa:441509
UCSC:uc010nou.2 CTD:441509 GeneCards:GC0XM102962 HGNC:HGNC:31715
HPA:HPA044759 neXtProt:NX_Q5JXX5 PharmGKB:PA142671731
InParanoid:Q5JXX5 KO:K05271 OMA:IQESRFY GenomeRNAi:441509
NextBio:110250 ArrayExpress:Q5JXX5 Bgee:Q5JXX5 CleanEx:HS_GLRA4
Genevestigator:Q5JXX5 Uniprot:Q5JXX5
Length = 417
Score = 221 (82.9 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 44/110 (40%), Positives = 70/110 (63%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F N+ Y ++L LSC M+LK +P+D Q+C++++ S+G+T DL+F W E P VQV
Sbjct: 154 IFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQV 213
Query: 182 VKNLHLPRFTL-EKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L LP+F L ++ C NTG ++C++V +R+ YYLIQ+Y
Sbjct: 214 AEGLTLPQFILRDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMY 263
Score = 161 (61.7 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y +Y L + +W PDLFF+NEK +FH + N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 150
Query: 61 YIRIHPQGSVLYSI 74
+RI G+VLYSI
Sbjct: 151 LLRIFKNGNVLYSI 164
>UNIPROTKB|C9JBL4 [details] [associations]
symbol:GLRA2 "Glycine receptor subunit alpha-2"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 PRINTS:PR00252 PRINTS:PR01673
PROSITE:PS00236 GO:GO:0005887 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF63712
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0022824 EMBL:AC003658
EMBL:AC003683 HGNC:HGNC:4327 ChiTaRS:GLRA2 IPI:IPI00643998
ProteinModelPortal:C9JBL4 SMR:C9JBL4 STRING:C9JBL4 PRIDE:C9JBL4
Ensembl:ENST00000415367 ArrayExpress:C9JBL4 Bgee:C9JBL4
Uniprot:C9JBL4
Length = 215
Score = 174 (66.3 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++LTLSCPM+LK +P+D Q+C++++ S+G+T +DLIF W PVQV + L LP+F
Sbjct: 146 YSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 205
Query: 191 TLEK 194
L++
Sbjct: 206 ILKE 209
Score = 163 (62.4 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y V + R+QW D RL Y++Y L + +W PDLFF+NEK +FH++ N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNK 134
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLYSI
Sbjct: 135 LLRISKNGKVLYSI 148
>ZFIN|ZDB-GENE-010410-2 [details] [associations]
symbol:glrba "gylcine receptor, beta a" species:7955
"Danio rerio" [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-010410-2 GO:GO:0016021 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 OrthoDB:EOG4HMJ97
PANTHER:PTHR18945:SF29 EMBL:BX284619 EMBL:CU075714 EMBL:AJ404971
IPI:IPI00492685 RefSeq:NP_571856.1 UniGene:Dr.7438
Ensembl:ENSDART00000102790 GeneID:83412 KEGG:dre:83412 CTD:83412
eggNOG:KOG3644 InParanoid:Q9DES8 OMA:GGTPIHV NextBio:20934181
Uniprot:Q9DES8
Length = 498
Score = 221 (82.9 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 39/99 (39%), Positives = 69/99 (69%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+S+TLSCP+ L+L+P+D Q C +++ S+G+TT DL+F+W+ GDPVQ+ + LP+F +++
Sbjct: 176 LSVTLSCPLALQLFPMDTQYCKMQLESFGYTTKDLVFMWQSGDPVQM-DEIALPQFDVKQ 234
Query: 195 FYTDYCN-SK--TNTGAYSCLKVDLLFKREFSYYLIQIY 230
Y N +K TG Y+C++V +R+ +Y++ +Y
Sbjct: 235 EDIKYANCTKFYPGTGYYTCVEVIFTLRRQVGFYMMGVY 273
Score = 124 (48.7 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
+Y V + R++W D RL+ D + LT+ +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQRWNDPRLRLPT-DFKSDALTVDPKMFQCLWKPDLFFANEKNANFHDVTQE 158
Query: 59 NVYIRIHPQGSVLYSI 74
N+ + I G VL S+
Sbjct: 159 NILLFIFRNGDVLISM 174
Score = 83 (34.3 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYWS 133
P+ +KR+D+ +R FP F FN+ YWS
Sbjct: 468 PSAAKRVDLYARALFPFTFLFFNVIYWS 495
Score = 40 (19.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/55 (23%), Positives = 22/55 (40%)
Query: 85 VHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLT-YWSTISLT 138
+H++ Q C + +K RS ++ + P F L N Y I +T
Sbjct: 394 IHVSTLQVVENRCKKVCTSKSDLRSNDFSIVGSL--PRDFELSNFDCYGKPIEVT 446
>UNIPROTKB|F1MHX4 [details] [associations]
symbol:F1MHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030285
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0001505 GeneTree:ENSGT00550000074441 GO:GO:0008503
IPI:IPI00713807 EMBL:DAAA02017603 EMBL:DAAA02017604
Ensembl:ENSBTAT00000015688 OMA:SSTXKKE Uniprot:F1MHX4
Length = 286
Score = 174 (66.3 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 152 (58.6 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
>UNIPROTKB|I3L720 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:FP312872 EMBL:CU861582 Ensembl:ENSSSCT00000023000
Uniprot:I3L720
Length = 367
Score = 174 (66.3 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 2 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 58
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 59 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 86
Score = 152 (58.6 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 70 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 129
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 130 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 174
Score = 85 (35.0 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 308 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 355
>UNIPROTKB|G5E9Z6 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH471069 GO:GO:0006821
UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2 EMBL:AC084352
EMBL:AC093745 EMBL:AC095060 EMBL:AC104072 ProteinModelPortal:G5E9Z6
SMR:G5E9Z6 Ensembl:ENST00000515082 ArrayExpress:G5E9Z6 Bgee:G5E9Z6
Uniprot:G5E9Z6
Length = 367
Score = 174 (66.3 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 152 (58.6 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
>UNIPROTKB|P10063 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4ZS935 EMBL:X12361 IPI:IPI00713807
PIR:S12510 RefSeq:NP_776966.1 UniGene:Bt.174
ProteinModelPortal:P10063 GeneID:282236 KEGG:bta:282236 CTD:2555
InParanoid:P10063 BindingDB:P10063 ChEMBL:CHEMBL2321
NextBio:20806055 Uniprot:P10063
Length = 451
Score = 174 (66.3 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 154 (59.3 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLPGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 85 (35.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 392 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 439
>UNIPROTKB|F1PEH3 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2555
OMA:TTAEPNK EMBL:AAEX03009033 RefSeq:XP_858923.2
Ensembl:ENSCAFT00000002984 GeneID:482131 KEGG:cfa:482131
Uniprot:F1PEH3
Length = 442
Score = 174 (66.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 77 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 133
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 134 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 161
Score = 152 (58.6 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 145 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 204
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 205 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 249
Score = 85 (35.0 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 383 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 430
>UNIPROTKB|P47869 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] [GO:0006836 "neurotransmitter transport"
evidence=IMP] [GO:0008503 "benzodiazepine receptor activity"
evidence=IMP] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IMP] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IMP] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0034220 GO:GO:0007214 MIM:103780 GO:GO:0006836 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0001505 DrugBank:DB00829
DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 CTD:2555 EMBL:S62907 EMBL:AB209295
IPI:IPI00026631 PIR:I57947 RefSeq:NP_000798.2 RefSeq:NP_001107647.1
UniGene:Hs.116250 ProteinModelPortal:P47869 SMR:P47869
IntAct:P47869 STRING:P47869 TCDB:1.A.9.5.2 PhosphoSite:P47869
DMDM:126302547 PaxDb:P47869 PRIDE:P47869 Ensembl:ENST00000356504
Ensembl:ENST00000381620 Ensembl:ENST00000510861
Ensembl:ENST00000514090 GeneID:2555 KEGG:hsa:2555 UCSC:uc003gxc.3
GeneCards:GC04M046167 HGNC:HGNC:4076 HPA:HPA014261 MIM:137140
neXtProt:NX_P47869 PharmGKB:PA28490 InParanoid:P47869
PhylomeDB:P47869 BindingDB:P47869 ChEMBL:CHEMBL4956 ChiTaRS:GABRA2
DrugBank:DB01558 DrugBank:DB01567 GenomeRNAi:2555 NextBio:10091
ArrayExpress:P47869 Bgee:P47869 CleanEx:HS_GABRA2
Genevestigator:P47869 GermOnline:ENSG00000151834 Uniprot:P47869
Length = 451
Score = 174 (66.3 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 152 (58.6 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 85 (35.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 392 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 439
>MGI|MGI:95614 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 2" species:10090 "Mus musculus" [GO:0001505
"regulation of neurotransmitter levels" evidence=ISO] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=ISO] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
MGI:MGI:95614 GO:GO:0005886 GO:GO:0030285 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 GO:GO:0008503 CTD:2555 EMBL:M86567
IPI:IPI00110598 RefSeq:NP_032092.1 UniGene:Mm.5304
ProteinModelPortal:P26048 SMR:P26048 STRING:P26048
PhosphoSite:P26048 PaxDb:P26048 PRIDE:P26048
Ensembl:ENSMUST00000000572 GeneID:14395 KEGG:mmu:14395
InParanoid:P26048 OMA:TTAEPNK BindingDB:P26048 ChEMBL:CHEMBL2705
NextBio:285927 Bgee:P26048 Genevestigator:P26048
GermOnline:ENSMUSG00000000560 Uniprot:P26048
Length = 451
Score = 174 (66.3 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 152 (58.6 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 85 (35.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 392 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 439
>RGD|61856 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor, alpha 2"
species:10116 "Rattus norvegicus" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISO] [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=ISO] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA;ISO] [GO:0008503 "benzodiazepine receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0032590 "dendrite membrane"
evidence=IDA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:L08491 IPI:IPI00950967 PIR:JH0370
UniGene:Rn.48180 ProteinModelPortal:P23576 PhosphoSite:P23576
PRIDE:P23576 UCSC:RGD:61856 InParanoid:P23576 BindingDB:P23576
ChEMBL:CHEMBL341 ArrayExpress:P23576 Genevestigator:P23576
GermOnline:ENSRNOG00000002349 Uniprot:P23576
Length = 451
Score = 174 (66.3 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNSMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 152 (58.6 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNPSDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 85 (35.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 392 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 439
>UNIPROTKB|F1LNE8 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:TTAEPNK
IPI:IPI00679252 PRIDE:F1LNE8 Ensembl:ENSRNOT00000003197
ArrayExpress:F1LNE8 Uniprot:F1LNE8
Length = 451
Score = 174 (66.3 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 152 (58.6 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 85 (35.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 392 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 439
>UNIPROTKB|F1LMU7 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0008503 CTD:2555 IPI:IPI00950967
UniGene:Rn.48180 RefSeq:NP_001129251.1 ProteinModelPortal:F1LMU7
PRIDE:F1LMU7 Ensembl:ENSRNOT00000064779 GeneID:289606
KEGG:rno:289606 NextBio:630056 ArrayExpress:F1LMU7 Uniprot:F1LMU7
Length = 452
Score = 174 (66.3 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 152 (58.6 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 85 (35.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 393 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 440
>UNIPROTKB|B7Z1H8 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2
EMBL:AC084352 EMBL:AC093745 EMBL:AC095060 EMBL:AC104072
EMBL:AK293466 IPI:IPI00922092 SMR:B7Z1H8 STRING:B7Z1H8
Ensembl:ENST00000540012 UCSC:uc011bzc.1 Uniprot:B7Z1H8
Length = 456
Score = 174 (66.3 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 31 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 87
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 88 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 115
Score = 152 (58.6 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 99 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 158
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 159 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 203
Score = 85 (35.0 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 397 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 444
>UNIPROTKB|F1NXA6 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008503 "benzodiazepine receptor
activity" evidence=IEA] [GO:0030285 "integral to synaptic vesicle
membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:AC147646 IPI:IPI00603099 Ensembl:ENSGALT00000022974
Uniprot:F1NXA6
Length = 458
Score = 174 (66.3 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 91 EYTIDVFFRQRWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 147
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 148 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 175
Score = 152 (58.6 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 159 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 218
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 219 RLNQYDLLGQTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTY 263
Score = 83 (34.3 bits), Expect = 5.7e-19, Sum P(2) = 5.7e-19
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 422 KIDRMSRIVFPVLFGTFNLVYWAT 445
>WB|WBGene00001587 [details] [associations]
symbol:ggr-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
HOGENOM:HOG000231336 EMBL:FO080451 GeneID:191637
KEGG:cel:CELE_C45B2.4 CTD:191637 RefSeq:NP_001024472.2
ProteinModelPortal:Q2WF65 EnsemblMetazoa:C45B2.4a.1
EnsemblMetazoa:C45B2.4a.2 UCSC:C45B2.4b.2 WormBase:C45B2.4a
InParanoid:Q2WF65 OMA:IAMNDTA NextBio:949770 ArrayExpress:Q2WF65
Uniprot:Q2WF65
Length = 546
Score = 197 (74.4 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 33/103 (32%), Positives = 61/103 (59%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHL 187
++ Y + IS+ + C +NL+ +PLD Q C L++ SY +TT+ L+ WKE +P+ N+ +
Sbjct: 143 SILYDTRISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEDEPITRNPNIAM 202
Query: 188 PRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ Y C+ +TG +SC+ + KRE +++++Q Y
Sbjct: 203 SDMHIVDLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSY 245
Score = 130 (50.8 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++ + + F++ W D RL +N+ R+ ++W PD++F+N + FH + PN
Sbjct: 76 DFQLDVYFQQFWRDPRLAHNE-TRRVLVKDKAVLHKMWKPDVYFANARIAEFHEVTQPNF 134
Query: 61 YIRIHPQGSVLY 72
+ I P GS+LY
Sbjct: 135 LVWIQPDGSILY 146
Score = 88 (36.0 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 108 RSKRIDVISRITFPLVFALFNLTYW 132
R+K+ID SR FPL F +FNLTYW
Sbjct: 514 RAKKIDQTSRWIFPLTFIIFNLTYW 538
Score = 37 (18.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 172 LWKEGDPVQ 180
+WKE DP +
Sbjct: 441 VWKESDPAE 449
>UNIPROTKB|E9PBQ7 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4076
ChiTaRS:GABRA2 OMA:TTAEPNK EMBL:AC084352 EMBL:AC093745
EMBL:AC095060 EMBL:AC104072 IPI:IPI00922092
ProteinModelPortal:E9PBQ7 SMR:E9PBQ7 Ensembl:ENST00000507069
ArrayExpress:E9PBQ7 Bgee:E9PBQ7 Uniprot:E9PBQ7
Length = 511
Score = 174 (66.3 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRIQDDGTLLYTMR-LTVQAECPMHL 170
Score = 152 (58.6 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKN-L 185
L Y +++ CPM+L+ +P+D SC LK SY +TT ++ ++W D VQV +
Sbjct: 154 LLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L K++TG Y+ + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTY 258
Score = 85 (35.0 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRS-KRIDVISRITFPLVFALFNLTYWST 134
T P+ +K + AK S +ID +SRI FP++F FNL YW+T
Sbjct: 452 TTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWAT 499
>WB|WBGene00000232 [details] [associations]
symbol:avr-14 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0042493
"response to drug" evidence=IGI] [GO:0031987 "locomotion involved
in locomotory behavior" evidence=IGI;IMP] [GO:0043051 "regulation
of pharyngeal pumping" evidence=IGI;IMP] [GO:0008144 "drug binding"
evidence=IGI] [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=IDA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0016020 GO:GO:0042493 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043051 EMBL:FO080115
GO:GO:0031987 GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273
GO:GO:0008068 GeneID:172270 KEGG:cel:CELE_B0207.12 UCSC:B0207.12a
CTD:172270 NextBio:874763 RefSeq:NP_001020963.1
ProteinModelPortal:Q95Q97 SMR:Q95Q97 PRIDE:Q95Q97
EnsemblMetazoa:B0207.12b WormBase:B0207.12b InParanoid:Q95Q97
ArrayExpress:Q95Q97 Uniprot:Q95Q97
Length = 430
Score = 292 (107.8 bits), Expect = 8.6e-26, P = 8.6e-26
Identities = 55/104 (52%), Positives = 71/104 (68%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLH-- 186
+ Y +SL LSCPM+L+ YPLDRQ+C + +ASY +TT D+ + WKE P+Q L
Sbjct: 158 ILYSVRLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLRQS 217
Query: 187 LPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
LP F L+ TDYC S TNTG YSC +V L +RE+SYYLIQ+Y
Sbjct: 218 LPSFELQDVVTDYCTSLTNTGEYSCARVVLRLRREYSYYLIQLY 261
Score = 199 (75.1 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 44/108 (40%), Positives = 60/108 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYD--GRIK---YLTLT------EASRVWMPDLFFSNEKE 49
EYS Q TFRE+W D+RL Y Y+ G + ++ L ++ ++WMPD FF NEKE
Sbjct: 78 EYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQIWMPDTFFQNEKE 137
Query: 50 GHFHNIIMPNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
H I PNV IRIH G +LYS+ L + C + + R+NC
Sbjct: 138 ARRHLIDKPNVLIRIHKNGQILYSVR-LSLVLSCPMSLEFYPLDRQNC 184
Score = 69 (29.3 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
S+R+D++SR+TFPL F F + Y+
Sbjct: 398 SRRVDLMSRLTFPLTFFSFLIFYY 421
>ZFIN|ZDB-GENE-080722-20 [details] [associations]
symbol:zgc:194845 "zgc:194845" species:7955 "Danio
rerio" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 ZFIN:ZDB-GENE-080722-20
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG41G343 EMBL:CR376845 EMBL:CR925774
EMBL:BC163099 EMBL:BC163103 IPI:IPI00502511 RefSeq:NP_001122232.1
UniGene:Dr.116763 Ensembl:ENSDART00000048430 GeneID:570876
KEGG:dre:570876 OMA:YLRHYWQ NextBio:20890333 Uniprot:B3DIE5
Length = 472
Score = 177 (67.4 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 34/110 (30%), Positives = 64/110 (58%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV 182
VF N+ Y I++T C M+ +PLD Q+CSL++ SY + +DL+ WK G+
Sbjct: 172 VFPDGNILYSVRITVTALCSMDFSRFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRT 231
Query: 183 KNLHLPRFTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
+ L +F +E+F+ Y + ++TG Y+ L ++ + +R ++++Q Y+
Sbjct: 232 DEIALSQFFIEEFHPSYGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYF 281
Score = 140 (54.3 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 21/74 (28%), Positives = 42/74 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W D+RL + + + + ++W+PD+FF + K H+ M N+
Sbjct: 109 DFTMTLYLRHYWQDDRLAFPSSNNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENI 168
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G++LYS+
Sbjct: 169 MLRVFPDGNILYSV 182
Score = 76 (31.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 107 TRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+ S ID SRI FPL + LFN+ YW S
Sbjct: 443 SNSYMIDSYSRILFPLAYLLFNIIYWCIYS 472
>ZFIN|ZDB-GENE-061013-194 [details] [associations]
symbol:gabra1 "gamma-aminobutyric acid (GABA) A
receptor, alpha 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
ZFIN:ZDB-GENE-061013-194 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 KO:K05175 CTD:2554
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD EMBL:CR847531 EMBL:CABZ01068465
EMBL:CABZ01068466 EMBL:CABZ01068467 EMBL:CABZ01095604 EMBL:BC124697
IPI:IPI00804069 RefSeq:NP_001070794.1 UniGene:Dr.134090
Ensembl:ENSDART00000100000 GeneID:768183 KEGG:dre:768183
InParanoid:Q08BJ3 NextBio:20918498 Uniprot:Q08BJ3
Length = 459
Score = 171 (65.3 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQSWKDERLKFK---GPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI +G++LY++ L +C +H+
Sbjct: 143 NKLLRITEEGTLLYTMR-LTVRAECPMHL 170
Score = 141 (54.7 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T +++++W G VV
Sbjct: 154 LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVADDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 258
Score = 86 (35.3 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID I+RI FPL+F FNL YW+T
Sbjct: 420 KIDRIARIAFPLLFGTFNLVYWAT 443
>WB|WBGene00001592 [details] [associations]
symbol:glc-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886
GO:GO:0009792 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706
HOGENOM:HOG000231336 EMBL:U14525 EMBL:FO080262 PIR:S50865
RefSeq:NP_491470.1 UniGene:Cel.19753 ProteinModelPortal:Q17328
SMR:Q17328 DIP:DIP-27494N MINT:MINT-1047253 PaxDb:Q17328
EnsemblMetazoa:F25F8.2 GeneID:172103 KEGG:cel:CELE_F25F8.2
UCSC:F25F8.2 CTD:172103 WormBase:F25F8.2 InParanoid:Q17328
KO:K05273 OMA:NIMIRML BindingDB:Q17328 ChEMBL:CHEMBL5527
DrugBank:DB00602 NextBio:874023 Uniprot:Q17328
Length = 434
Score = 281 (104.0 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 63/151 (41%), Positives = 90/151 (59%)
Query: 87 MTVPQTPRKNCCRSWLAK--FPTR--SKRIDVISRITFPLVFALFNLTYWSTISLTLSCP 142
+TVP +K+ W+ FPT + R + F ++ + Y S ISLT SCP
Sbjct: 107 LTVPHV-KKSL---WIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILYSSRISLTSSCP 162
Query: 143 MNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNL--HLPRFTLEKFYTDY- 199
M L+LYPLD QSC+ + SY T +D+++ W PVQ+ + LP F L+ + T+
Sbjct: 163 MRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNFILKNYTTNAD 222
Query: 200 CNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
C S TNTG+Y CL++ LLFKR+FSYYL+Q+Y
Sbjct: 223 CTSHTNTGSYGCLRMQLLFKRQFSYYLVQLY 253
Score = 194 (73.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 39/100 (39%), Positives = 59/100 (59%)
Query: 1 EYSVQLTFREQWLDERLKYND--YDGRIKYLTLTEASR-VWMPDLFFSNEKEGHFHNIIM 57
EYS+QLTFREQW+D RL Y + + +LT+ + +W+PD FF EK H H I M
Sbjct: 77 EYSIQLTFREQWIDPRLAYENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDM 136
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N+++RI+P G +LYS S + C + + + ++C
Sbjct: 137 ENMFLRIYPDGKILYS-SRISLTSSCPMRLQLYPLDYQSC 175
>UNIPROTKB|B7ZBQ7 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 EMBL:AL353659 EMBL:AL353135
UniGene:Hs.99927 GeneID:2569 KEGG:hsa:2569 CTD:2569 HGNC:HGNC:4090
KO:K05190 GenomeRNAi:2569 GO:GO:0016917 IPI:IPI00940134
RefSeq:NP_001243633.1 RefSeq:NP_001254511.1 SMR:B7ZBQ7
STRING:B7ZBQ7 Ensembl:ENST00000369451 Uniprot:B7ZBQ7
Length = 392
Score = 175 (66.7 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 33/103 (32%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK+G D ++ + + L +
Sbjct: 101 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQ 160
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 161 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 203
Score = 130 (50.8 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 90 MLRVQPDGKVLYSL 103
Score = 83 (34.3 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ RS + ID SRI FP + LFNL YWS S
Sbjct: 348 SPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 392
>UNIPROTKB|F1ND89 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01671 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:RMMVQLA EMBL:AADN02002380 EMBL:AADN02002378 EMBL:AADN02002379
IPI:IPI00595666 Ensembl:ENSGALT00000025445 Uniprot:F1ND89
Length = 438
Score = 174 (66.3 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 33/103 (32%), Positives = 63/103 (61%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK G D ++ + + L +
Sbjct: 149 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQ 208
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 209 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 251
Score = 133 (51.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + + ++W+PD+FF + K H+ NV
Sbjct: 78 DFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 137
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 138 MLRVQPDGKVLYSL 151
Score = 74 (31.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SRI FP + LFNL YWS S
Sbjct: 414 IDKYSRIIFPGAYILFNLIYWSIFS 438
>UNIPROTKB|F1NAX6 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:ASPKTTY EMBL:AADN02013489 IPI:IPI00583603
Ensembl:ENSGALT00000011779 Uniprot:F1NAX6
Length = 443
Score = 171 (65.3 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 64 EYTIDVFFRQSWRDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 120
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 121 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 148
Score = 136 (52.9 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP--VQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++I+ W G V+V K
Sbjct: 132 LLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKTEVIYTWTLGKDKSVEVAKGGS 191
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 192 RLNQYDLLGHVVGTEMVRSSTGEYVVMTTHFHLKRKIGYFVIQTY 236
Score = 90 (36.7 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 14/24 (58%), Positives = 21/24 (87%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
++D +SRI FP++FA+FNL YW+T
Sbjct: 405 KVDKMSRIVFPVLFAIFNLVYWAT 428
>WB|WBGene00001591 [details] [associations]
symbol:glc-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IGI;IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 KO:K05273 EMBL:Z92830 EMBL:U14524
PIR:S50864 PIR:T20754 RefSeq:NP_507090.1 UniGene:Cel.18023
ProteinModelPortal:G5EBR3 SMR:G5EBR3 EnsemblMetazoa:F11A5.10
GeneID:180086 KEGG:cel:CELE_F11A5.10 CTD:180086 WormBase:F11A5.10
OMA:DEINMEY ChEMBL:CHEMBL4410 NextBio:908030 Uniprot:G5EBR3
Length = 461
Score = 280 (103.6 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 54/102 (52%), Positives = 68/102 (66%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLH--LP 188
Y ISL LSCPM L+ YP+D Q CS+ +ASY +TT D+ +LWKE P+Q+ L LP
Sbjct: 181 YSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLP 240
Query: 189 RFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F L T YC S TNTG YSCL+ + KREFS+YL+Q+Y
Sbjct: 241 SFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLY 282
Score = 221 (82.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/123 (39%), Positives = 70/123 (56%)
Query: 1 EYSVQLTFREQWLDERLKYN-DYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EYS QLT RE W+D+RL Y DG+ ++ LT ++WMPD FF NEK+ + H I PN
Sbjct: 109 EYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPN 168
Query: 60 VYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRIT 119
V IRIH G+VLYS+ + + C +++ + C LA + +K I+ + +
Sbjct: 169 VLIRIHNDGTVLYSVR-ISLVLSCPMYLQYYPMDVQQCSID-LASYAYTTKDIEYLWKEH 226
Query: 120 FPL 122
PL
Sbjct: 227 SPL 229
>UNIPROTKB|F1S0D1 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:CU075926
Ensembl:ENSSSCT00000004771 Uniprot:F1S0D1
Length = 422
Score = 175 (66.7 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 33/103 (32%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK+G D ++ + + L +
Sbjct: 131 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQ 190
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 191 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 233
Score = 130 (50.8 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ NV
Sbjct: 60 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 119
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 120 MLRVQPDGKVLYSL 133
Score = 87 (35.7 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+PR+ RS + ID SRI FP + LFNL YWS S
Sbjct: 378 SPRRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 422
>UNIPROTKB|E1BCQ5 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:DAAA02026450
IPI:IPI00714608 Ensembl:ENSBTAT00000015496 Uniprot:E1BCQ5
Length = 422
Score = 175 (66.7 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 33/103 (32%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK+G D ++ + + L +
Sbjct: 131 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQ 190
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 191 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 233
Score = 130 (50.8 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ NV
Sbjct: 60 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 119
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 120 MLRVQPDGKVLYSL 133
Score = 83 (34.3 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ RS + ID SRI FP + LFNL YWS S
Sbjct: 378 SPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 422
>ZFIN|ZDB-GENE-040724-212 [details] [associations]
symbol:gabrr1 "gamma-aminobutyric acid (GABA)
receptor, rho 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-040724-212 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
OrthoDB:EOG4RJG1G EMBL:BX537249 EMBL:BX248418 IPI:IPI00509581
RefSeq:NP_001020724.1 UniGene:Dr.92000 SMR:Q5TZ16
Ensembl:ENSDART00000012376 GeneID:568984 KEGG:dre:568984
eggNOG:NOG244283 InParanoid:Q5TZ16 OMA:ENIMLRI NextBio:20889441
Uniprot:Q5TZ16
Length = 466
Score = 173 (66.0 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 34/103 (33%), Positives = 63/103 (61%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y +++T C M+L +PLD Q+CSL++ SY +T DDL+ WK G+ +Q + L +
Sbjct: 173 YSLRVTVTSMCNMDLSHFPLDTQTCSLEIESYAYTDDDLMLYWKRGNKSLQTDDKISLSQ 232
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 233 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 275
Score = 133 (51.9 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W D RL + + ++W+PD+FF + K H+ NV
Sbjct: 102 DFTMTLYLRHYWKDARLSFPSNTNQSMTFDGRLVKKIWVPDIFFVHSKRSFIHDTTTENV 161
Query: 61 YIRIHPQGSVLYSI 74
+R+HP G VLYS+
Sbjct: 162 MLRVHPDGKVLYSL 175
>WB|WBGene00000233 [details] [associations]
symbol:avr-15 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043051 "regulation of
pharyngeal pumping" evidence=IGI;IMP] [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IGI;IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043051 GO:GO:0001508 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:Z77668
EMBL:Z81118 CTD:179834 RefSeq:NP_001024076.1
ProteinModelPortal:G5ECH3 SMR:G5ECH3 PRIDE:G5ECH3
EnsemblMetazoa:R11G10.1a GeneID:179834 KEGG:cel:CELE_R11G10.1
WormBase:R11G10.1a OMA:NISYWTH NextBio:907054 Uniprot:G5ECH3
Length = 657
Score = 283 (104.7 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 53/104 (50%), Positives = 71/104 (68%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLH-- 186
+ Y ISL LSCPM+L+ YP+D Q C + +ASY +TT D+ ++WKE PVQ+ L
Sbjct: 371 ILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSSS 430
Query: 187 LPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
LP F L T YC SKTNTG+YSCL+ + +R+FSYYL+Q+Y
Sbjct: 431 LPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLY 474
Score = 225 (84.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 47/123 (38%), Positives = 70/123 (56%)
Query: 1 EYSVQLTFREQWLDERLKYN-DYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EYSVQLTFRE W+D+RL + D + +L LT +WMPD FF NEK+ + H I PN
Sbjct: 301 EYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPN 360
Query: 60 VYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRIT 119
V IR+H G++LYS+ + + C +H+ + C LA + +K I+ + +
Sbjct: 361 VLIRVHKDGTILYSVR-ISLVLSCPMHLQYYPMDVQQCFID-LASYAYTTKDIEYVWKEE 418
Query: 120 FPL 122
P+
Sbjct: 419 TPV 421
>UNIPROTKB|P24046 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00466
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 EMBL:M62400
EMBL:AK296124 EMBL:AL353659 EMBL:AL353135 EMBL:BC130344
IPI:IPI00747264 IPI:IPI00921480 PIR:A38627 RefSeq:NP_001243632.1
RefSeq:NP_002033.2 UniGene:Hs.99927 ProteinModelPortal:P24046
SMR:P24046 IntAct:P24046 STRING:P24046 PhosphoSite:P24046
DMDM:223590210 PRIDE:P24046 DNASU:2569 Ensembl:ENST00000435811
Ensembl:ENST00000454853 GeneID:2569 KEGG:hsa:2569 UCSC:uc003pna.2
UCSC:uc011dzv.1 CTD:2569 GeneCards:GC06M089944 HGNC:HGNC:4090
MIM:137161 neXtProt:NX_P24046 PharmGKB:PA28505 InParanoid:P24046
KO:K05190 OMA:RMMVQLA OrthoDB:EOG4RJG1G BindingDB:P24046
ChEMBL:CHEMBL3561 GenomeRNAi:2569 NextBio:10161 ArrayExpress:P24046
Bgee:P24046 CleanEx:HS_GABRR1 Genevestigator:P24046
GermOnline:ENSG00000146276 Uniprot:P24046
Length = 479
Score = 175 (66.7 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 33/103 (32%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK+G D ++ + + L +
Sbjct: 188 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQ 247
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 248 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 290
Score = 130 (50.8 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 177 MLRVQPDGKVLYSL 190
Score = 83 (34.3 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ RS + ID SRI FP + LFNL YWS S
Sbjct: 435 SPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 479
>RGD|61900 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) A receptor, rho 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007601 "visual perception" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007601 GO:GO:0046982 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G EMBL:U21070 EMBL:X95579 IPI:IPI00199471
UniGene:Rn.33552 ProteinModelPortal:P50572 STRING:P50572
PhosphoSite:P50572 PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900
InParanoid:P50572 BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 175 (66.7 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 33/103 (32%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK+G D ++ + + L +
Sbjct: 189 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQ 248
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 249 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 291
Score = 130 (50.8 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 178 MLRVQPDGKVLYSL 191
Score = 81 (33.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ R + ID SRI FP + LFNL YWS S
Sbjct: 436 SPQRKSQRGSYVSMRINTHAIDKYSRIIFPAAYILFNLIYWSIFS 480
>UNIPROTKB|P50572 [details] [associations]
symbol:Gabrr1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007601 GO:GO:0046982 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:U21070
EMBL:X95579 IPI:IPI00199471 UniGene:Rn.33552
ProteinModelPortal:P50572 STRING:P50572 PhosphoSite:P50572
PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900 InParanoid:P50572
BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 175 (66.7 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 33/103 (32%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK+G D ++ + + L +
Sbjct: 189 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQ 248
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 249 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 291
Score = 130 (50.8 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 178 MLRVQPDGKVLYSL 191
Score = 81 (33.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ R + ID SRI FP + LFNL YWS S
Sbjct: 436 SPQRKSQRGSYVSMRINTHAIDKYSRIIFPAAYILFNLIYWSIFS 480
>MGI|MGI:95625 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
MGI:MGI:95625 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
KO:K05190 OrthoDB:EOG4RJG1G EMBL:AF024620 EMBL:AL670464
IPI:IPI00113785 RefSeq:NP_032101.3 UniGene:Mm.14116
ProteinModelPortal:P56475 SMR:P56475 STRING:P56475
PhosphoSite:P56475 PRIDE:P56475 Ensembl:ENSMUST00000029947
GeneID:14408 KEGG:mmu:14408 UCSC:uc008sfr.1 InParanoid:A3KG51
ChEMBL:CHEMBL2790 NextBio:285981 Bgee:P56475 Genevestigator:P56475
GermOnline:ENSMUSG00000028280 Uniprot:P56475
Length = 480
Score = 175 (66.7 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 33/103 (32%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK+G D ++ + + L +
Sbjct: 189 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQ 248
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 249 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 291
Score = 130 (50.8 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 178 MLRVQPDGKVLYSL 191
Score = 79 (32.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ R + ID SRI FP + LFNL YWS S
Sbjct: 436 SPQRKGQRGSYVSMRINTHAIDKYSRIIFPAAYILFNLIYWSIFS 480
>UNIPROTKB|E7EWG0 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4089 EMBL:AC008514
IPI:IPI00979633 ProteinModelPortal:E7EWG0 SMR:E7EWG0
Ensembl:ENST00000519385 UCSC:uc011dev.2 ArrayExpress:E7EWG0
Bgee:E7EWG0 Uniprot:E7EWG0
Length = 289
Score = 182 (69.1 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+++L L ++T+E+++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Score = 106 (42.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W+D+RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWMDQRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
>UNIPROTKB|Q9UN88 [details] [associations]
symbol:GABRQ "Gamma-aminobutyric acid receptor subunit
theta" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=TAS] [GO:0005326
"neurotransmitter transporter activity" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0006836 "neurotransmitter
transport" evidence=TAS] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
GO:GO:0004888 EMBL:CH471169 GO:GO:0005326 CTD:55879 EMBL:AF189259
EMBL:AF002997 EMBL:BC109210 EMBL:BC109211 EMBL:AF144648
IPI:IPI00297913 RefSeq:NP_061028.2 UniGene:Hs.283081
ProteinModelPortal:Q9UN88 SMR:Q9UN88 STRING:Q9UN88
PhosphoSite:Q9UN88 DMDM:13959382 PRIDE:Q9UN88
Ensembl:ENST00000370306 GeneID:55879 KEGG:hsa:55879 UCSC:uc004ffp.1
GeneCards:GC0XP151806 H-InvDB:HIX0056145 HGNC:HGNC:14454
HPA:HPA002063 MIM:300349 neXtProt:NX_Q9UN88 PharmGKB:PA28504
eggNOG:NOG317370 HOGENOM:HOG000049189 HOVERGEN:HBG051708
InParanoid:Q9UN88 KO:K05192 OMA:FFHQTWK OrthoDB:EOG48SGSN
PhylomeDB:Q9UN88 BindingDB:Q9UN88 ChEMBL:CHEMBL2843
GenomeRNAi:55879 NextBio:61204 ArrayExpress:Q9UN88 Bgee:Q9UN88
CleanEx:HS_GABRQ Genevestigator:Q9UN88 GermOnline:ENSG00000147402
PANTHER:PTHR18945:SF87 Uniprot:Q9UN88
Length = 632
Score = 174 (66.3 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 35/105 (33%), Positives = 63/105 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKE-GDPVQVVKNLHLPR 189
Y ++ T +C ++L +P+D+Q+C+L + SYG+T +D+I W + G+ + + + LH+P+
Sbjct: 173 YGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAIHMTEELHIPQ 232
Query: 190 FTLEKFYTDYCNSKT---NTGAYSCLKVDLLFKREFSYYLIQIYY 231
FT F SK TG+Y L + +RE + YL+Q+Y+
Sbjct: 233 FT---FLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYW 274
Score = 132 (51.5 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F + W D RL Y Y+ + LTL ++W+PD +F N K+ H++ +
Sbjct: 103 DYTITMFFHQTWKDSRLAY--YETTLN-LTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVE 159
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N ++HP G+V Y I L C + +
Sbjct: 160 NRVFQLHPDGTVRYGIR-LTTTAACSLDL 187
Score = 74 (31.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYW 132
P ++D SR FPL F LFN+ YW
Sbjct: 601 PDYVPKVDKWSRFLFPLAFGLFNIVYW 627
>ZFIN|ZDB-GENE-091204-365 [details] [associations]
symbol:gabra3 "gamma-aminobutyric acid (GABA) A
receptor, alpha 3" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-091204-365
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GeneTree:ENSGT00550000074441
EMBL:BX899180 EMBL:BX928756 EMBL:CABZ01088082 EMBL:CABZ01088083
EMBL:CABZ01088084 EMBL:CABZ01088085 EMBL:CABZ01088086
EMBL:CABZ01088087 EMBL:CABZ01088088 EMBL:CABZ01088089
IPI:IPI00993290 Ensembl:ENSDART00000122393 Uniprot:E7EYG5
Length = 294
Score = 167 (63.8 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG ++ L L AS++W PD FF N K+ HN+ P
Sbjct: 94 EYTIDVFFRQSWRDERLKF---DGPMQVLPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 150
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 151 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 178
Score = 135 (52.6 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP--VQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++++W D V V +
Sbjct: 162 LLYTMRLTIHAECPMHLEDFPMDAHACPLKFGSYAYTNNEVVYIWTADDEKSVSVAPDGS 221
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L ++TG Y + KR+ Y++IQ Y
Sbjct: 222 RLNQYDLLGHVIGKETISSSTGEYVVMTTYFHLKRKIGYFVIQTY 266
>UNIPROTKB|F1MCS2 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00550000074441 IPI:IPI00704308 UniGene:Bt.175
OMA:ASPKTTY EMBL:DAAA02068172 EMBL:DAAA02068173 EMBL:DAAA02068174
Ensembl:ENSBTAT00000008798 Uniprot:F1MCS2
Length = 492
Score = 169 (64.5 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 111 EYTIDVFFRQTWHDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 167
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 168 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 195
Score = 135 (52.6 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD--PVQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +TT ++++ W G V+V ++
Sbjct: 179 LLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGS 238
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 239 RLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTY 283
Score = 99 (39.9 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRSK--RIDVISRITFPLVFALFNLTYWST 134
T+ +P+ C + + T + ++D ISRI FP++FA+FNL YW+T
Sbjct: 429 TIIASPKTTCVQDIPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWAT 477
>UNIPROTKB|P10064 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X12362 IPI:IPI00704308 PIR:S12511
RefSeq:NP_776967.1 UniGene:Bt.175 ProteinModelPortal:P10064
GeneID:282237 KEGG:bta:282237 CTD:2556 InParanoid:P10064
OrthoDB:EOG4X0MSC BindingDB:P10064 ChEMBL:CHEMBL3628
NextBio:20806056 Uniprot:P10064
Length = 492
Score = 169 (64.5 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 111 EYTIDVFFRQTWHDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 167
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 168 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 195
Score = 135 (52.6 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD--PVQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +TT ++++ W G V+V ++
Sbjct: 179 LLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGS 238
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 239 RLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTY 283
Score = 99 (39.9 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRSK--RIDVISRITFPLVFALFNLTYWST 134
T+ +P+ C + + T + ++D ISRI FP++FA+FNL YW+T
Sbjct: 429 TIIASPKTTCVQDIPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWAT 477
>UNIPROTKB|E2QVJ7 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2556
OMA:ASPKTTY EMBL:AAEX03027059 EMBL:AAEX03027060 RefSeq:XP_549343.1
Ensembl:ENSCAFT00000030424 GeneID:492223 KEGG:cfa:492223
NextBio:20864840 Uniprot:E2QVJ7
Length = 492
Score = 169 (64.5 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 111 EYTIDVFFRQTWHDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 167
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 168 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 195
Score = 135 (52.6 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD--PVQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +TT ++++ W G V+V ++
Sbjct: 179 LLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGS 238
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 239 RLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTY 283
Score = 93 (37.8 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 100 SWLAKFPTRSK------RIDVISRITFPLVFALFNLTYWST 134
+++ PT +K ++D ISRI FP++FA+FNL YW+T
Sbjct: 437 TYVQDIPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWAT 477
>UNIPROTKB|P34903 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186 Orphanet:79102
DrugBank:DB00829 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371 GO:GO:0008503
CTD:2556 OrthoDB:EOG4X0MSC EMBL:S62908 EMBL:AF166361 EMBL:AF165901
EMBL:AF165902 EMBL:AF165903 EMBL:AF165904 EMBL:AF165905
EMBL:AF165906 EMBL:AF166359 EMBL:AF166360 EMBL:BC028629
IPI:IPI00002897 PIR:I77911 RefSeq:NP_000799.1 UniGene:Hs.123024
ProteinModelPortal:P34903 SMR:P34903 IntAct:P34903
MINT:MINT-7242442 STRING:P34903 PhosphoSite:P34903 DMDM:462149
PRIDE:P34903 DNASU:2556 Ensembl:ENST00000370311
Ensembl:ENST00000370314 Ensembl:ENST00000535043 GeneID:2556
KEGG:hsa:2556 UCSC:uc010ntk.1 GeneCards:GC0XM151334 HGNC:HGNC:4077
HPA:HPA000839 MIM:305660 neXtProt:NX_P34903 PharmGKB:PA28491
InParanoid:P34903 OMA:ASPKTTY PhylomeDB:P34903 BindingDB:P34903
ChEMBL:CHEMBL3026 GenomeRNAi:2556 NextBio:10095 Bgee:P34903
CleanEx:HS_GABRA3 Genevestigator:P34903 GermOnline:ENSG00000011677
Uniprot:P34903
Length = 492
Score = 169 (64.5 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 111 EYTIDVFFRQTWHDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 167
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 168 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 195
Score = 135 (52.6 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD--PVQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +TT ++++ W G V+V ++
Sbjct: 179 LLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGS 238
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 239 RLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTY 283
Score = 92 (37.4 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 15/24 (62%), Positives = 21/24 (87%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
++D ISRI FP++FA+FNL YW+T
Sbjct: 454 KVDKISRIIFPVLFAIFNLVYWAT 477
>UNIPROTKB|I3LPL5 [details] [associations]
symbol:I3LPL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:CU928257
Ensembl:ENSSSCT00000022596 OMA:LRIMEDG Uniprot:I3LPL5
Length = 355
Score = 169 (64.5 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 88 EYTIDVFFRQSWKDERLKFK---GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 144
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 145 NKLLRITEDGTLLYTMR-LTVRAECPMHL 172
Score = 128 (50.1 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++ W VV
Sbjct: 156 LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS 215
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 216 RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 260
>UNIPROTKB|F1NY45 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:ISESDMD EMBL:AADN02035937 IPI:IPI00582090
Ensembl:ENSGALT00000003373 Uniprot:F1NY45
Length = 444
Score = 193 (73.0 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 36/109 (33%), Positives = 66/109 (60%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+IF W G D V
Sbjct: 140 LFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVIFTWLRGNDSVHG 199
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++ L L ++T+E++YT S+ TG+Y L + +R Y++++ Y
Sbjct: 200 IEKLRLSQYTVERYYTLISKSQQETGSYPRLILQFELRRNVLYFILETY 248
Score = 100 (40.3 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y+ + R++W D RL ++ L E +W+PD + K H++ + N
Sbjct: 79 DYTATIYLRQRWTDPRLVFHGNKSFTLDARLVEL--LWVPDTYIVESKRSFLHDVTVGNR 136
Query: 61 YIRIHPQGSVLYSI 74
IR+ G++LY++
Sbjct: 137 LIRLFSNGTILYAL 150
Score = 60 (26.2 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
+D S++ FPL F L N+ YW+
Sbjct: 418 VDHYSKLLFPLFFMLVNVFYWA 439
>UNIPROTKB|E5RI57 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4089 EMBL:AC008514
IPI:IPI00980228 ProteinModelPortal:E5RI57 SMR:E5RI57
Ensembl:ENST00000519598 ArrayExpress:E5RI57 Bgee:E5RI57
Uniprot:E5RI57
Length = 349
Score = 182 (69.1 bits), Expect = 7.2e-23, Sum P(2) = 7.2e-23
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+++L L ++T+E+++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Score = 106 (42.4 bits), Expect = 7.2e-23, Sum P(2) = 7.2e-23
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W+D+RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWMDQRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
>MGI|MGI:95615 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 MGI:MGI:95615 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2556 OrthoDB:EOG4X0MSC EMBL:M86568
IPI:IPI00110601 RefSeq:NP_032093.3 UniGene:Mm.102286
UniGene:Mm.447666 ProteinModelPortal:P26049 SMR:P26049
STRING:P26049 PhosphoSite:P26049 PaxDb:P26049 PRIDE:P26049
Ensembl:ENSMUST00000055966 GeneID:14396 KEGG:mmu:14396
InParanoid:P26049 BindingDB:P26049 ChEMBL:CHEMBL3387 NextBio:285931
Bgee:P26049 Genevestigator:P26049 GermOnline:ENSMUSG00000031343
Uniprot:P26049
Length = 492
Score = 169 (64.5 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 111 EYTIDVFFRQTWHDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 167
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 168 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 195
Score = 130 (50.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD--PVQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++I+ W G V+V ++
Sbjct: 179 LLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGS 238
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 239 RLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTY 283
Score = 92 (37.4 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 15/24 (62%), Positives = 21/24 (87%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
++D ISRI FP++FA+FNL YW+T
Sbjct: 454 KVDKISRIIFPVLFAIFNLVYWAT 477
>RGD|2648 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor, alpha 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079
PRINTS:PR01616 PROSITE:PS00236 RGD:2648 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991 IPI:IPI00197343 PIR:A34130
UniGene:Rn.10367 ProteinModelPortal:P20236 IntAct:P20236
STRING:P20236 PRIDE:P20236 InParanoid:P20236 BindingDB:P20236
ChEMBL:CHEMBL328 NextBio:604953 ArrayExpress:P20236
Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 169 (64.5 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 111 EYTIDVFFRQTWHDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 167
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 168 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 195
Score = 130 (50.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD--PVQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++I+ W G V+V ++
Sbjct: 179 LLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGS 238
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 239 RLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTY 283
Score = 93 (37.8 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRSK--RIDVISRITFPLVFALFNLTYWST 134
TV +P+ + A+ T + ++D ISRI FP++FA+FNL YW+T
Sbjct: 430 TVIASPKTTYVQDSPAETKTYNSVSKVDKISRIIFPVLFAIFNLVYWAT 478
>UNIPROTKB|P20236 [details] [associations]
symbol:Gabra3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
RGD:2648 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991
IPI:IPI00197343 PIR:A34130 UniGene:Rn.10367
ProteinModelPortal:P20236 IntAct:P20236 STRING:P20236 PRIDE:P20236
InParanoid:P20236 BindingDB:P20236 ChEMBL:CHEMBL328 NextBio:604953
ArrayExpress:P20236 Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 169 (64.5 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ DG +K L L AS++W PD FF N K+ HN+ P
Sbjct: 111 EYTIDVFFRQTWHDERLKF---DGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTP 167
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C +H+
Sbjct: 168 NKLLRLVDNGTLLYTMR-LTIHAECPMHL 195
Score = 130 (50.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD--PVQVVKN-L 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++I+ W G V+V ++
Sbjct: 179 LLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGS 238
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L +++TG Y + KR+ Y++IQ Y
Sbjct: 239 RLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTY 283
Score = 93 (37.8 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 88 TVPQTPRKNCCRSWLAKFPTRSK--RIDVISRITFPLVFALFNLTYWST 134
TV +P+ + A+ T + ++D ISRI FP++FA+FNL YW+T
Sbjct: 430 TVIASPKTTYVQDSPAETKTYNSVSKVDKISRIIFPVLFAIFNLVYWAT 478
>MGI|MGI:95613 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0008144 "drug binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016917 "GABA receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 MGI:MGI:95613 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:M86566 EMBL:M63436 EMBL:X61430
IPI:IPI00113772 PIR:A39062 RefSeq:NP_034380.1 UniGene:Mm.439668
ProteinModelPortal:P62812 SMR:P62812 IntAct:P62812 STRING:P62812
PhosphoSite:P62812 PaxDb:P62812 PRIDE:P62812
Ensembl:ENSMUST00000020707 GeneID:14394 KEGG:mmu:14394
InParanoid:P62812 BindingDB:P62812 ChEMBL:CHEMBL3139 NextBio:285923
Bgee:P62812 Genevestigator:P62812 GermOnline:ENSMUSG00000010803
Uniprot:P62812
Length = 455
Score = 169 (64.5 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 85 EYTIDVFFRQSWKDERLKFK---GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 141
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 142 NKLLRITEDGTLLYTMR-LTVRAECPMHL 169
Score = 128 (50.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++ W VV
Sbjct: 153 LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS 212
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 213 RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 257
Score = 90 (36.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FPL+F +FNL YW+T
Sbjct: 417 KIDRLSRIAFPLLFGIFNLVYWAT 440
>RGD|61855 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor, alpha 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0016917 "GABA receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
RGD:61855 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GO:GO:0051932 KO:K05175 CTD:2554
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:L08490
EMBL:AY574250 EMBL:BC100061 IPI:IPI00192642 PIR:JQ0158
RefSeq:NP_899155.1 UniGene:Rn.28463 ProteinModelPortal:P62813
SMR:P62813 IntAct:P62813 MINT:MINT-3371441 STRING:P62813
PhosphoSite:P62813 PRIDE:P62813 Ensembl:ENSRNOT00000004725
GeneID:29705 KEGG:rno:29705 UCSC:RGD:61855 InParanoid:P62813
BindingDB:P62813 ChEMBL:CHEMBL343 NextBio:610121
Genevestigator:P62813 GermOnline:ENSRNOG00000003512 GO:GO:0008503
GO:GO:0005237 Uniprot:P62813
Length = 455
Score = 169 (64.5 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 85 EYTIDVFFRQSWKDERLKFK---GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 141
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 142 NKLLRITEDGTLLYTMR-LTVRAECPMHL 169
Score = 128 (50.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++ W VV
Sbjct: 153 LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS 212
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 213 RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 257
Score = 90 (36.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FPL+F +FNL YW+T
Sbjct: 417 KIDRLSRIAFPLLFGIFNLVYWAT 440
>UNIPROTKB|P08219 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005431 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 EMBL:X05717 EMBL:BC114156 IPI:IPI00714377
PIR:A27142 RefSeq:NP_001178048.1 UniGene:Bt.87630
ProteinModelPortal:P08219 PRIDE:P08219 Ensembl:ENSBTAT00000009483
GeneID:780973 KEGG:bta:780973 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 InParanoid:P08219 OMA:APNIARD OrthoDB:EOG4ZS935
BindingDB:P08219 ChEMBL:CHEMBL3627 NextBio:20924533 Uniprot:P08219
Length = 456
Score = 169 (64.5 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQSWKDERLKFK---GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRITEDGTLLYTMR-LTVRAECPMHL 170
Score = 128 (50.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++ W VV
Sbjct: 154 LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 258
Score = 90 (36.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FPL+F +FNL YW+T
Sbjct: 418 KIDRLSRIAFPLLFGIFNLVYWAT 441
>UNIPROTKB|E2RSP8 [details] [associations]
symbol:GABRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 CTD:2554 GeneTree:ENSGT00550000074441
OMA:APNIARD EMBL:AAEX03003042 RefSeq:XP_546261.2
ProteinModelPortal:E2RSP8 Ensembl:ENSCAFT00000027295 GeneID:489143
KEGG:cfa:489143 NextBio:20862355 Uniprot:E2RSP8
Length = 456
Score = 169 (64.5 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQSWKDERLKFK---GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRITEDGTLLYTMR-LTVRAECPMHL 170
Score = 128 (50.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++ W VV
Sbjct: 154 LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 258
Score = 90 (36.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FPL+F +FNL YW+T
Sbjct: 418 KIDRLSRIAFPLLFGIFNLVYWAT 441
>UNIPROTKB|P14867 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0016917 "GABA receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005887 EMBL:CH471062 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
DrugBank:DB00962 DrugBank:DB01068 DrugBank:DB01159 DrugBank:DB00842
DrugBank:DB00818 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 Orphanet:64280 Orphanet:307 DrugBank:DB00273
GO:GO:0051932 DrugBank:DB00292 DrugBank:DB00466 DrugBank:DB00475
DrugBank:DB00829 DrugBank:DB00241 DrugBank:DB00849 DrugBank:DB00683
DrugBank:DB00349 DrugBank:DB01174 DrugBank:DB00794 DrugBank:DB00898
DrugBank:DB01355 DrugBank:DB00404 DrugBank:DB00425 DrugBank:DB00599
KO:K05175 DrugBank:DB00837 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:X14766 EMBL:BC030696 EMBL:X13584
IPI:IPI00295235 PIR:A31588 PIR:A60652 RefSeq:NP_000797.2
RefSeq:NP_001121115.1 RefSeq:NP_001121116.1 RefSeq:NP_001121117.1
RefSeq:NP_001121118.1 RefSeq:NP_001121119.1 RefSeq:NP_001121120.1
UniGene:Hs.175934 ProteinModelPortal:P14867 SMR:P14867
IntAct:P14867 STRING:P14867 PhosphoSite:P14867 DMDM:27808653
PRIDE:P14867 DNASU:2554 Ensembl:ENST00000023897
Ensembl:ENST00000393943 Ensembl:ENST00000420560
Ensembl:ENST00000428797 Ensembl:ENST00000437025
Ensembl:ENST00000444819 GeneID:2554 KEGG:hsa:2554 UCSC:uc003lyx.4
GeneCards:GC05P161206 HGNC:HGNC:4075 HPA:CAB001963 HPA:CAB022502
MIM:137160 MIM:611136 neXtProt:NX_P14867 PharmGKB:PA28489
InParanoid:P14867 PhylomeDB:P14867 BindingDB:P14867
ChEMBL:CHEMBL1962 DrugBank:DB00237 DrugBank:DB01353
DrugBank:DB00628 DrugBank:DB00189 DrugBank:DB01205 DrugBank:DB00690
DrugBank:DB00801 DrugBank:DB00371 DrugBank:DB00463 DrugBank:DB00474
DrugBank:DB01107 DrugBank:DB01595 DrugBank:DB00312 DrugBank:DB01588
DrugBank:DB01589 DrugBank:DB00418 DrugBank:DB00306 DrugBank:DB01154
GenomeRNAi:2554 NextBio:10087 ArrayExpress:P14867 Bgee:P14867
CleanEx:HS_GABRA1 Genevestigator:P14867 GermOnline:ENSG00000022355
Uniprot:P14867
Length = 456
Score = 169 (64.5 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQSWKDERLKFK---GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRITEDGTLLYTMR-LTVRAECPMHL 170
Score = 128 (50.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++ W VV
Sbjct: 154 LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 258
Score = 90 (36.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FPL+F +FNL YW+T
Sbjct: 418 KIDRLSRIAFPLLFGIFNLVYWAT 441
>UNIPROTKB|F1RR71 [details] [associations]
symbol:LOC100516706 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 EMBL:CU640458
RefSeq:XP_003134137.3 Ensembl:ENSSSCT00000018538 GeneID:100516706
KEGG:ssc:100516706 OMA:NALAGKX Uniprot:F1RR71
Length = 456
Score = 169 (64.5 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQSWKDERLKFK---GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRITEDGTLLYTMR-LTVRAECPMHL 170
Score = 128 (50.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++ W VV
Sbjct: 154 LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 258
Score = 90 (36.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FPL+F +FNL YW+T
Sbjct: 418 KIDRLSRIAFPLLFGIFNLVYWAT 441
>UNIPROTKB|Q5EA06 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 HSSP:P23415
GeneTree:ENSGT00630000089571 EMBL:BT020763 IPI:IPI00707024
RefSeq:NP_001015618.1 UniGene:Bt.25960 ProteinModelPortal:Q5EA06
Ensembl:ENSBTAT00000003604 GeneID:517459 KEGG:bta:517459 CTD:2568
eggNOG:NOG255582 InParanoid:Q5EA06 KO:K05189 OMA:ISESDMD
OrthoDB:EOG4N04F2 NextBio:20872445 Uniprot:Q5EA06
Length = 440
Score = 185 (70.2 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++NL L ++T+++++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LENLRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETY 250
Score = 103 (41.3 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W D+RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWTDQRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
Score = 63 (27.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
+D S++ FPL+F L N+ YW+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWA 435
>UNIPROTKB|P19150 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:X54244
IPI:IPI00582648 PIR:A60033 RefSeq:NP_989649.1 UniGene:Gga.17167
ProteinModelPortal:P19150 Ensembl:ENSGALT00000002609 GeneID:374214
KEGG:gga:374214 InParanoid:P19150 NextBio:20813718 Uniprot:P19150
Length = 455
Score = 169 (64.5 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQSWKDERLKFK---GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RI G++LY++ L +C +H+
Sbjct: 143 NKLLRITEDGTLLYTMR-LTVRAECPMHL 170
Score = 126 (49.4 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y +++ CPM+L+ +P+D +C LK SY +T ++++ W VV
Sbjct: 154 LLYTMRLTVRAECPMHLEDFPMDVHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS 213
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L D +++TG Y + KR+ Y++IQ Y
Sbjct: 214 RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 258
Score = 90 (36.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FPL+F +FNL YW+T
Sbjct: 417 KIDRLSRIAFPLLFGIFNLVYWAT 440
>UNIPROTKB|O00591 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:U95367 EMBL:AF009702
EMBL:AF009694 EMBL:AF009695 EMBL:AF009696 EMBL:AF009697
EMBL:AF009698 EMBL:AF009699 EMBL:AF009700 EMBL:AF009701
EMBL:AK292901 EMBL:BC074810 EMBL:BC074865 EMBL:BC109105
EMBL:BC109106 IPI:IPI00012181 RefSeq:NP_055026.1 UniGene:Hs.26225
ProteinModelPortal:O00591 SMR:O00591 STRING:O00591
PhosphoSite:O00591 PaxDb:O00591 PRIDE:O00591
Ensembl:ENST00000265294 Ensembl:ENST00000518525 GeneID:2568
KEGG:hsa:2568 UCSC:uc003mau.3 GeneCards:GC05P170143 HGNC:HGNC:4089
HPA:CAB014883 MIM:602729 neXtProt:NX_O00591 PharmGKB:PA28503
InParanoid:O00591 PhylomeDB:O00591 BindingDB:O00591
ChEMBL:CHEMBL3506 GenomeRNAi:2568 NextBio:10157 ArrayExpress:O00591
Bgee:O00591 CleanEx:HS_GABRP Genevestigator:O00591
GermOnline:ENSG00000094755 Uniprot:O00591
Length = 440
Score = 182 (69.1 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+++L L ++T+E+++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Score = 106 (42.4 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W+D+RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWMDQRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
Score = 63 (27.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
+D S++ FPL+F L N+ YW+
Sbjct: 414 VDHYSKLLFPLIFMLANVFYWA 435
>UNIPROTKB|E2RS87 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
CTD:2568 KO:K05189 OMA:ISESDMD EMBL:AAEX03003017 RefSeq:XP_546242.3
ProteinModelPortal:E2RS87 Ensembl:ENSCAFT00000026815 GeneID:489124
KEGG:cfa:489124 NextBio:20862340 Uniprot:E2RS87
Length = 440
Score = 183 (69.5 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++NL L ++T+++++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LENLRLAQYTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Score = 103 (41.3 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W D+RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWTDQRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
Score = 63 (27.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
+D S++ FPL+F L N+ YW+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWA 435
>UNIPROTKB|F1RRX8 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
KO:K05189 OMA:ISESDMD EMBL:CU856091 RefSeq:XP_003134108.1
Ensembl:ENSSSCT00000026800 GeneID:100525792 KEGG:ssc:100525792
Uniprot:F1RRX8
Length = 440
Score = 181 (68.8 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++NL L ++T+++++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LENLRLAQYTIQQYFTLVTRSQQETGNYTRLVLQFELQRNVLYFILETY 250
Score = 103 (41.3 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W D+RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWTDQRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
Score = 64 (27.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
+D S++ FPLVF L N+ YW+
Sbjct: 414 VDRYSKLLFPLVFMLANVFYWA 435
>MGI|MGI:2387597 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA) A receptor, pi"
species:10090 "Mus musculus" [GO:0004890 "GABA-A receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 MGI:MGI:2387597 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335
GeneTree:ENSGT00630000089571 CTD:2568 eggNOG:NOG255582 KO:K05189
OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:AK028946 EMBL:AK160577
EMBL:AL669814 EMBL:BC023693 EMBL:BC025550 EMBL:BC027245
EMBL:BC031196 IPI:IPI00154070 RefSeq:NP_666129.1 UniGene:Mm.99989
ProteinModelPortal:Q8QZW7 SMR:Q8QZW7 PhosphoSite:Q8QZW7
PRIDE:Q8QZW7 Ensembl:ENSMUST00000020366 GeneID:216643
KEGG:mmu:216643 UCSC:uc007ikm.1 InParanoid:Q8QZW7 BindingDB:Q8QZW7
ChEMBL:CHEMBL2746 NextBio:375250 Bgee:Q8QZW7 CleanEx:MM_GABRP
Genevestigator:Q8QZW7 GermOnline:ENSMUSG00000020159 Uniprot:Q8QZW7
Length = 440
Score = 179 (68.1 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++NL L ++T+++++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LENLRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETY 250
Score = 100 (40.3 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W D RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWTDPRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
Score = 63 (27.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
+D S++ FPL+F L N+ YW+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWA 435
>RGD|620532 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA-A) receptor, pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 RGD:620532 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 179 (68.1 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++NL L ++T+++++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LENLRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETY 250
Score = 100 (40.3 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W D RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWTDPRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
Score = 63 (27.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
+D S++ FPL+F L N+ YW+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWA 435
>UNIPROTKB|O09028 [details] [associations]
symbol:Gabrp "Gamma-aminobutyric acid receptor subunit pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 RGD:620532
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 179 (68.1 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 34/109 (31%), Positives = 67/109 (61%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+D Q+C L++ S+G+ +D+ F W G D V+
Sbjct: 142 LFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRG 201
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++NL L ++T+++++T S+ TG Y+ L + +R Y++++ Y
Sbjct: 202 LENLRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETY 250
Score = 100 (40.3 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W D RL + +G K TL +W+PD + K+ H + +
Sbjct: 81 DYTATIYLRQRWTDPRLVF---EGN-KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVG 136
Query: 59 NVYIRIHPQGSVLYSI 74
N IR+ G+VLY++
Sbjct: 137 NRLIRLFSNGTVLYAL 152
Score = 63 (27.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
+D S++ FPL+F L N+ YW+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWA 435
>UNIPROTKB|Q08E50 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425
GO:GO:0008306 GO:GO:0007605 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0044297 GO:GO:0090102 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:BC123418 IPI:IPI00701740
RefSeq:NP_001069312.1 UniGene:Bt.63027 ProteinModelPortal:Q08E50
STRING:Q08E50 PRIDE:Q08E50 Ensembl:ENSBTAT00000004397 GeneID:523515
KEGG:bta:523515 CTD:2558 InParanoid:Q08E50 OMA:IRSERIH
NextBio:20873764 GO:GO:0060384 Uniprot:Q08E50
Length = 462
Score = 153 (58.9 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + FR+ W DERL++ R+ L AS++W PD FF N K+ HN+ PN
Sbjct: 93 EYTIDVFFRQSWKDERLRFKGPMQRLPLNNLL-ASKIWTPDTFFHNGKKSIAHNMTTPNK 151
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHM 87
+R+ G++LY++ L +C + +
Sbjct: 152 LLRLEDDGTLLYTMR-LTISAECPMQL 177
Score = 148 (57.2 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y ++++ CPM L+ +P+D +C LK SY + ++I++W G VV
Sbjct: 161 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNGTAKSVVVAEDGS 220
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L N T+TG Y+ + KR+ Y++IQ Y
Sbjct: 221 RLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTY 265
Score = 86 (35.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FPL+F FNL YW+T
Sbjct: 424 KIDKMSRIIFPLLFGTFNLVYWAT 447
>UNIPROTKB|P31644 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032809 "neuronal cell body membrane" evidence=IEA] [GO:0043235
"receptor complex" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0060384 "innervation" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0007165 GO:GO:0007420 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0030425 GO:GO:0004872 GO:GO:0005215 GO:GO:0008306
GO:GO:0007605 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0090102 DrugBank:DB00683
DrugBank:DB01544 DrugBank:DB00404 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 EMBL:L08485 EMBL:AK290453
EMBL:BT009830 EMBL:BC111979 EMBL:BC113422 EMBL:AF061785
EMBL:AF228447 EMBL:AF228448 EMBL:AF228449 IPI:IPI00012471
PIR:A48933 RefSeq:NP_000801.1 RefSeq:NP_001158509.1
UniGene:Hs.24969 ProteinModelPortal:P31644 SMR:P31644 STRING:P31644
PhosphoSite:P31644 DMDM:399519 PaxDb:P31644 PRIDE:P31644 DNASU:2558
Ensembl:ENST00000335625 Ensembl:ENST00000355395
Ensembl:ENST00000400081 GeneID:2558 KEGG:hsa:2558 UCSC:uc001zbd.2
GeneCards:GC15P027112 HGNC:HGNC:4079 MIM:137142 neXtProt:NX_P31644
PharmGKB:PA28493 InParanoid:P31644 OMA:WTNGTTK PhylomeDB:P31644
BindingDB:P31644 ChEMBL:CHEMBL5112 GenomeRNAi:2558 NextBio:10103
ArrayExpress:P31644 Bgee:P31644 CleanEx:HS_GABRA5
Genevestigator:P31644 GermOnline:ENSG00000186297 Uniprot:P31644
Length = 462
Score = 153 (58.9 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + FR+ W DERL++ R+ L AS++W PD FF N K+ HN+ PN
Sbjct: 93 EYTIDVFFRQSWKDERLRFKGPMQRLPLNNLL-ASKIWTPDTFFHNGKKSIAHNMTTPNK 151
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHM 87
+R+ G++LY++ L +C + +
Sbjct: 152 LLRLEDDGTLLYTMR-LTISAECPMQL 177
Score = 148 (57.2 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y ++++ CPM L+ +P+D +C LK SY + +++++W G VV
Sbjct: 161 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGS 220
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L N T+TG Y+ + KR+ Y++IQ Y
Sbjct: 221 RLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTY 265
Score = 84 (34.6 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 424 KIDKMSRIVFPVLFGTFNLVYWAT 447
>MGI|MGI:95617 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 5" species:10090 "Mus musculus" [GO:0001662
"behavioral fear response" evidence=IMP] [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0008306
"associative learning" evidence=IMP] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=ISO;IDA] [GO:0032809 "neuronal cell body membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0044297 "cell
body" evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0050811 "GABA receptor binding"
evidence=ISO] [GO:0060119 "inner ear receptor cell development"
evidence=IMP] [GO:0060384 "innervation" evidence=IMP] [GO:0090102
"cochlea development" evidence=IMP] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 MGI:MGI:95617
GO:GO:0007420 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0032809
GO:GO:0001662 GO:GO:0034707 GO:GO:0005254 GO:GO:0044297
GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384
OMA:WTNGTTK EMBL:AK038476 EMBL:AK083185 EMBL:BC062112
IPI:IPI00221880 RefSeq:NP_795916.1 UniGene:Mm.273114
ProteinModelPortal:Q8BHJ7 SMR:Q8BHJ7 MINT:MINT-1789015
STRING:Q8BHJ7 PhosphoSite:Q8BHJ7 PRIDE:Q8BHJ7
Ensembl:ENSMUST00000068456 GeneID:110886 KEGG:mmu:110886
UCSC:uc009heb.1 InParanoid:Q8BHJ7 BindingDB:Q8BHJ7
ChEMBL:CHEMBL2304 NextBio:364867 Bgee:Q8BHJ7 Genevestigator:Q8BHJ7
GermOnline:ENSMUSG00000055078 Uniprot:Q8BHJ7
Length = 463
Score = 153 (58.9 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + FR+ W DERL++ R+ L AS++W PD FF N K+ HN+ PN
Sbjct: 93 EYTIDVFFRQSWKDERLRFKGPMQRLPLNNLL-ASKIWTPDTFFHNGKKSIAHNMTTPNK 151
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHM 87
+R+ G++LY++ L +C + +
Sbjct: 152 LLRLEDDGTLLYTMR-LTISAECPMQL 177
Score = 148 (57.2 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y ++++ CPM L+ +P+D +C LK SY + +++++W G VV
Sbjct: 161 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGS 220
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L N T+TG Y+ + KR+ Y++IQ Y
Sbjct: 221 RLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTY 265
Score = 85 (35.0 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 425 KIDKMSRIVFPILFGTFNLVYWAT 448
>RGD|61859 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor, alpha 5"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0004890 "GABA-A receptor activity"
evidence=IDA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEP;IMP] [GO:0007420 "brain development" evidence=IEP]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0008306 "associative learning" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0032809 "neuronal cell
body membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0044297 "cell body" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048666 "neuron development"
evidence=ISO] [GO:0050811 "GABA receptor binding" evidence=IPI]
[GO:0060119 "inner ear receptor cell development" evidence=IEA;ISO]
[GO:0060384 "innervation" evidence=IEA;ISO] [GO:0090102 "cochlea
development" evidence=IEA;ISO] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 RGD:61859 GO:GO:0007420 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0008306 GO:GO:0007605
GO:GO:0043235 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:X51992
EMBL:L08494 IPI:IPI00325359 PIR:B34130 RefSeq:NP_058991.1
UniGene:Rn.10368 ProteinModelPortal:P19969 MINT:MINT-1783807
STRING:P19969 PhosphoSite:P19969 Ensembl:ENSRNOT00000014573
GeneID:29707 KEGG:rno:29707 UCSC:RGD:61859 InParanoid:P19969
BindingDB:P19969 ChEMBL:CHEMBL300 NextBio:610127
Genevestigator:P19969 GermOnline:ENSRNOG00000010803 Uniprot:P19969
Length = 464
Score = 153 (58.9 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + FR+ W DERL++ R+ L AS++W PD FF N K+ HN+ PN
Sbjct: 93 EYTIDVFFRQSWKDERLRFKGPMQRLPLNNLL-ASKIWTPDTFFHNGKKSIAHNMTTPNK 151
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHM 87
+R+ G++LY++ L +C + +
Sbjct: 152 LLRLEDDGTLLYTMR-LTISAECPMQL 177
Score = 148 (57.2 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y ++++ CPM L+ +P+D +C LK SY + +++++W G VV
Sbjct: 161 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGS 220
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L N T+TG Y+ + KR+ Y++IQ Y
Sbjct: 221 RLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTY 265
Score = 85 (35.0 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 426 KIDKMSRIVFPILFGTFNLVYWAT 449
>UNIPROTKB|E2RG38 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090102 "cochlea development" evidence=IEA]
[GO:0060384 "innervation" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0008306
GO:GO:0007605 GO:GO:0001662 GO:GO:0044297 GO:GO:0090102
GO:GO:0006821 GO:GO:0060119 KO:K05175 GeneTree:ENSGT00550000074441
CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:AAEX03002173
EMBL:AAEX03002174 RefSeq:XP_545805.2 ProteinModelPortal:E2RG38
Ensembl:ENSCAFT00000015966 GeneID:488688 KEGG:cfa:488688
NextBio:20861999 Uniprot:E2RG38
Length = 463
Score = 153 (58.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + FR+ W DERL++ R+ L AS++W PD FF N K+ HN+ PN
Sbjct: 93 EYTIDVFFRQSWKDERLRFKGPMQRLPLNNLL-ASKIWTPDTFFHNGKKSIAHNMTTPNK 151
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHM 87
+R+ G++LY++ L +C + +
Sbjct: 152 LLRLEDDGTLLYTMR-LTISAECPMQL 177
Score = 147 (56.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y ++++ CPM L+ +P+D +C LK SY + +++++W G VV
Sbjct: 161 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGS 220
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L N T+TG Y+ + KR+ Y++IQ Y
Sbjct: 221 RLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTY 265
Score = 84 (34.6 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 425 KIDKMSRIVFPVLFGTFNLVYWAT 448
>UNIPROTKB|F1SR89 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005435 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0001662
GO:GO:0044297 GO:GO:0090102 GO:GO:0006821 GO:GO:0060119 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0060384 OMA:WTNGTTK
EMBL:CU861926 RefSeq:XP_003121696.1 UniGene:Ssc.6556
Ensembl:ENSSSCT00000005329 GeneID:100520472 KEGG:ssc:100520472
Uniprot:F1SR89
Length = 463
Score = 153 (58.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + FR+ W DERL++ R+ L AS++W PD FF N K+ HN+ PN
Sbjct: 93 EYTIDVFFRQSWKDERLRFKGPMQRLPLNNLL-ASKIWTPDTFFHNGKKSIAHNMTTPNK 151
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHM 87
+R+ G++LY++ L +C + +
Sbjct: 152 LLRLEDDGTLLYTMR-LTISAECPMQL 177
Score = 147 (56.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y ++++ CPM L+ +P+D +C LK SY + +++++W G VV
Sbjct: 161 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGS 220
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L N T+TG Y+ + KR+ Y++IQ Y
Sbjct: 221 RLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTY 265
Score = 83 (34.3 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 425 KIDKMSRIIFPVLFGTFNLVYWAT 448
>UNIPROTKB|F1RR70 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:HSDSKYH EMBL:FP016136 Ensembl:ENSSSCT00000018539 Uniprot:F1RR70
Length = 442
Score = 150 (57.9 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L+L S++W PD FF N K+ HN+ P
Sbjct: 67 EYTMDVFFRQTWTDERLKFG---GPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 123
Query: 59 NVYIRIHPQGSVLYSI 74
N RI G++LY++
Sbjct: 124 NKLFRIMQNGTILYTM 139
Score = 148 (57.2 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 126 LFNLTYWSTISLTL--SCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD--PVQV 181
LF + TI T+ CPM L +P+D +C LK SY + ++I+ WK+G V+V
Sbjct: 126 LFRIMQNGTILYTMRADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEV 185
Query: 182 VK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ + L ++ L K+NTG Y+ + V +R+ Y++IQIY
Sbjct: 186 PEESSSLLQYDLIGQTVSSETIKSNTGEYAIMTVYFHLQRKMGYFMIQIY 235
Score = 76 (31.8 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 400 TSKIDQYSRILFPVAFAGFNLVYW 423
>UNIPROTKB|E1BW42 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0044297
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:AC145944
IPI:IPI00812061 ProteinModelPortal:E1BW42
Ensembl:ENSGALT00000027027 OMA:FRTHLLL Uniprot:E1BW42
Length = 464
Score = 153 (58.9 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + FR+ W DERL++ R+ L AS++W PD FF N K+ HN+ PN
Sbjct: 93 EYTIDVFFRQSWKDERLRFKGPMQRLPLNNLL-ASKIWTPDTFFHNGKKSIAHNMTTPNK 151
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHM 87
+R+ G++LY++ L +C + +
Sbjct: 152 LLRLEDDGTLLYTMR-LTISAECPMQL 177
Score = 144 (55.7 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y ++++ CPM L+ +P+D +C LK SY + ++I++W VV
Sbjct: 161 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNSTTTSVVVAEDGS 220
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L N T+TG Y+ + KR+ Y++IQ Y
Sbjct: 221 RLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTY 265
Score = 83 (34.3 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 426 KIDKMSRIIFPVLFGTFNLVYWAT 449
>UNIPROTKB|E7ET93 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HGNC:HGNC:4085 ChiTaRS:GABRE EMBL:AF274855 IPI:IPI00647456
ProteinModelPortal:E7ET93 SMR:E7ET93 Ensembl:ENST00000370325
ArrayExpress:E7ET93 Bgee:E7ET93 Uniprot:E7ET93
Length = 365
Score = 179 (68.1 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 37/89 (41%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYND-YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EY++ + F + W DERL YND ++ + L S++W+PD FF N K H H I MPN
Sbjct: 115 EYTIDIIFSQTWYDERLCYNDTFESLV--LNGNVVSQLWIPDTFFRNSKRTHEHEITMPN 172
Query: 60 VYIRIHPQGSVLYSIS-DLDNMRQCEVHM 87
+RI+ G VLY+I +D C +HM
Sbjct: 173 QMVRIYKDGKVLYTIRMTID--AGCSLHM 199
Score = 85 (35.0 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 23/103 (22%), Positives = 46/103 (44%)
Query: 134 TISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFT 191
TI +T+ C +++ +P+D SC L +S+ + +++I+ W E +++ + F
Sbjct: 186 TIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKW-ENFKLEINEKNSWKLFQ 244
Query: 192 LEKFYTDYCNSK----TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ +T N T G + + + R F Y Q Y
Sbjct: 245 FD--FTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNY 285
>UNIPROTKB|P78334 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008099
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006810
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
EMBL:U66661 EMBL:Y09763 EMBL:Y09764 EMBL:Y09765 EMBL:Y07637
EMBL:U92283 EMBL:U92281 EMBL:U92282 IPI:IPI00297725
RefSeq:NP_004952.2 UniGene:Hs.22785 ProteinModelPortal:P78334
SMR:P78334 STRING:P78334 PhosphoSite:P78334 DMDM:13124728
PRIDE:P78334 DNASU:2564 Ensembl:ENST00000370328 GeneID:2564
KEGG:hsa:2564 UCSC:uc004ffi.3 CTD:2564 GeneCards:GC0XM151121
HGNC:HGNC:4085 HPA:HPA045918 MIM:300093 neXtProt:NX_P78334
PharmGKB:PA28499 eggNOG:NOG259781 InParanoid:P78334 KO:K05185
OMA:LYTIRMT OrthoDB:EOG4J9MZV PhylomeDB:P78334 BindingDB:P78334
ChEMBL:CHEMBL4635 ChiTaRS:GABRE GenomeRNAi:2564 NextBio:10131
ArrayExpress:P78334 Bgee:P78334 CleanEx:HS_GABRE
Genevestigator:P78334 GermOnline:ENSG00000102287 Uniprot:P78334
Length = 506
Score = 179 (68.1 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 37/89 (41%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYND-YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EY++ + F + W DERL YND ++ + L S++W+PD FF N K H H I MPN
Sbjct: 115 EYTIDIIFSQTWYDERLCYNDTFESLV--LNGNVVSQLWIPDTFFRNSKRTHEHEITMPN 172
Query: 60 VYIRIHPQGSVLYSIS-DLDNMRQCEVHM 87
+RI+ G VLY+I +D C +HM
Sbjct: 173 QMVRIYKDGKVLYTIRMTID--AGCSLHM 199
Score = 85 (35.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 23/103 (22%), Positives = 46/103 (44%)
Query: 134 TISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFT 191
TI +T+ C +++ +P+D SC L +S+ + +++I+ W E +++ + F
Sbjct: 186 TIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKW-ENFKLEINEKNSWKLFQ 244
Query: 192 LEKFYTDYCNSK----TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ +T N T G + + + R F Y Q Y
Sbjct: 245 FD--FTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNY 285
Score = 69 (29.3 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
R+D SR+ FP+ F FN+ YW
Sbjct: 479 RLDNYSRVVFPVTFFFFNVLYW 500
>UNIPROTKB|Q9PSA4 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid type C receptor RHO
1 subunit" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 HSSP:P23415 GeneTree:ENSGT00630000089571
OrthoDB:EOG4RJG1G EMBL:AADN02002380 EMBL:AADN02002378
EMBL:AADN02002379 IPI:IPI00818489 Ensembl:ENSGALT00000037181
InParanoid:Q9PSA4 Uniprot:Q9PSA4
Length = 292
Score = 174 (66.3 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 33/103 (32%), Positives = 63/103 (61%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK G D ++ + + L +
Sbjct: 31 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQ 90
Query: 190 FTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F +++F+T + ++TG Y+ L ++ +R ++L+Q Y+
Sbjct: 91 FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYF 133
Score = 75 (31.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 42 LFFSNEKEGHFHNIIMPNVYIRIHPQGSVLYSI 74
+FF + K H+ NV +R+ P G VLYS+
Sbjct: 1 MFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 33
>UNIPROTKB|F1NXB3 [details] [associations]
symbol:F1NXB3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AADN02031281 IPI:IPI00591094 ProteinModelPortal:F1NXB3
Ensembl:ENSGALT00000022965 Uniprot:F1NXB3
Length = 382
Score = 164 (62.8 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 138 TLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPRFTLEKFY 196
T +C M+L YPLD Q+C+L++ S G+TT+D+ F W G V V N+ LP+F++ +
Sbjct: 76 TAACMMDLHRYPLDEQNCTLEIYSNGYTTNDIEFYWNGGKSAVTGVSNIELPQFSIVDYK 135
Query: 197 TDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
T + TG Y L + KR Y+ +Q +
Sbjct: 136 TVSKRVEFPTGTYPQLSLSFWLKRNTGYFTLQTH 169
Score = 111 (44.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W ++RL Y+ G LTL A +W+ D +F N+K +++
Sbjct: 1 DYTLTMYFQQSWREKRLPYS---GISLNLTLDNRAADHLWVSDTYFQNDKNSFVQGVMVK 57
Query: 59 NVYIRIHPQGSVLYSI 74
I+ HP G+VLY +
Sbjct: 58 QT-IQYHPDGTVLYGL 72
>UNIPROTKB|F1S2D3 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:FP074856 Ensembl:ENSSSCT00000013944 Uniprot:F1S2D3
Length = 506
Score = 171 (65.3 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ +TF + W DERL+YN G + L S +W+PD FF N K H+I MP
Sbjct: 116 EYTIDITFYQTWYDERLRYN---GSFESFVLNGNLVSLLWVPDTFFRNSKRTQEHSITMP 172
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVHM 87
N +RI+ G VLY+I +D C +HM
Sbjct: 173 NQMVRIYKDGKVLYTIRMTID--AGCSLHM 200
Score = 89 (36.4 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 134 TISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFT 191
TI +T+ C +++ +P+D SC L +S+ + D+I+ W + +++ +N F
Sbjct: 187 TIRMTIDAGCSLHMVKFPMDSHSCPLSFSSFSYPVSDIIYKW-DNFTLEINENNSWKLFQ 245
Query: 192 LEKFYTDYCNSKTN--TGAYSCLKVDLLFK--REFSYYLIQIY 230
+ +T NS T A + + L F R F + Q Y
Sbjct: 246 FD--FTGVSNSTETIATLAGDFMVMTLFFNVSRRFGFVAFQNY 286
Score = 68 (29.0 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
R+D SR+ FP+ F FN+ YW
Sbjct: 479 RLDNYSRVIFPVTFFFFNVLYW 500
>MGI|MGI:95751 [details] [associations]
symbol:Glrb "glycine receptor, beta subunit" species:10090
"Mus musculus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0005488
"binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=ISA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=ISO;ISS] [GO:0006821 "chloride transport" evidence=IMP]
[GO:0007218 "neuropeptide signaling pathway" evidence=ISO;ISS]
[GO:0007268 "synaptic transmission" evidence=ISO;ISS] [GO:0007340
"acrosome reaction" evidence=IMP] [GO:0007399 "nervous system
development" evidence=ISO;ISS] [GO:0007601 "visual perception"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0009897 "external side of plasma membrane" evidence=ISA]
[GO:0016020 "membrane" evidence=ISA;IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;ISS;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO;ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS;IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=IMP] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0051291
"protein heterooligomerization" evidence=ISO] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IMP] [GO:0060013 "righting
reflex" evidence=IMP] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 MGI:MGI:95751 GO:GO:0005783 GO:GO:0051291
GO:GO:0007399 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0034707 GO:GO:0007628 GO:GO:0001964 EMBL:CH466547
HOVERGEN:HBG051707 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:U09399 EMBL:X81202 EMBL:X81201 EMBL:L32594
EMBL:AK083251 EMBL:BC037605 IPI:IPI00108776 PIR:S46459
RefSeq:NP_034428.2 UniGene:Mm.275639 ProteinModelPortal:P48168
SMR:P48168 MINT:MINT-4787310 STRING:P48168 PhosphoSite:P48168
PRIDE:P48168 Ensembl:ENSMUST00000029654 GeneID:14658 KEGG:mmu:14658
InParanoid:Q5U5X3 NextBio:286522 Bgee:P48168 CleanEx:MM_GLRB
Genevestigator:P48168 GermOnline:ENSMUSG00000028020 Uniprot:P48168
Length = 496
Score = 234 (87.4 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 42/99 (42%), Positives = 71/99 (71%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+S+TLSCP++L L+P+D Q C +++ S+G+TTDDL F+W+ GDPVQ+ K + LP+F ++K
Sbjct: 177 LSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDIKK 235
Query: 195 FYTDYCN-SK--TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+Y N +K TG Y+C++V +R+ +Y++ +Y
Sbjct: 236 EDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 144 (55.7 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 37/109 (33%), Positives = 58/109 (53%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTV-PQTPRKNCCRSWLAKF 105
N+ + I G VL S+ L C + +T+ P ++ C+ L F
Sbjct: 159 ENILLFIFRDGDVLVSMR-LSITLSCPLDLTLFPMDTQR--CKMQLESF 204
Score = 87 (35.7 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYWS 133
PT +KRID+ +R FP F FN+ YWS
Sbjct: 466 PTAAKRIDLYARALFPFCFLFFNVIYWS 493
>RGD|2706 [details] [associations]
symbol:Glrb "glycine receptor, beta" species:10116 "Rattus
norvegicus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006821 "chloride transport" evidence=ISO] [GO:0007218
"neuropeptide signaling pathway" evidence=ISO;ISS] [GO:0007268
"synaptic transmission" evidence=ISO;ISS;TAS] [GO:0007340 "acrosome
reaction" evidence=IEA;ISO] [GO:0007399 "nervous system development"
evidence=ISO;ISS] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0007628 "adult walking behavior" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0016594 "glycine binding" evidence=ISO;ISS;IDA]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISO;ISS;IDA;TAS] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;ISO;ISS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA;TAS] [GO:0050905
"neuromuscular process" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=IDA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IDA] [GO:0060013 "righting
reflex" evidence=IEA;ISO] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 RGD:2706
GO:GO:0016021 GO:GO:0005886 GO:GO:0051291 GO:GO:0007399 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:0001964 HOVERGEN:HBG051707 GO:GO:0016933 PDB:1T3E
PDB:2FTS PDBsum:1T3E PDBsum:2FTS GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:AJ310839 IPI:IPI00202491 PIR:JH0165
RefSeq:NP_445748.1 UniGene:Rn.94903 ProteinModelPortal:P20781
IntAct:P20781 STRING:P20781 Ensembl:ENSRNOT00000014170 GeneID:25456
KEGG:rno:25456 UCSC:RGD:2706 InParanoid:P20781 BindingDB:P20781
ChEMBL:CHEMBL4126 EvolutionaryTrace:P20781 NextBio:606717
ArrayExpress:P20781 Genevestigator:P20781
GermOnline:ENSRNOG00000010199 Uniprot:P20781
Length = 496
Score = 234 (87.4 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 42/99 (42%), Positives = 71/99 (71%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+S+TLSCP++L L+P+D Q C +++ S+G+TTDDL F+W+ GDPVQ+ K + LP+F ++K
Sbjct: 177 LSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDIKK 235
Query: 195 FYTDYCN-SK--TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+Y N +K TG Y+C++V +R+ +Y++ +Y
Sbjct: 236 EDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 144 (55.7 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 37/109 (33%), Positives = 58/109 (53%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTV-PQTPRKNCCRSWLAKF 105
N+ + I G VL S+ L C + +T+ P ++ C+ L F
Sbjct: 159 ENILLFIFRDGDVLVSMR-LSITLSCPLDLTLFPMDTQR--CKMQLESF 204
Score = 87 (35.7 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYWS 133
PT +KRID+ +R FP F FN+ YWS
Sbjct: 466 PTAAKRIDLYARALFPFCFLFFNVIYWS 493
>UNIPROTKB|F1P037 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GeneTree:ENSGT00550000074453 GO:GO:0016594 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AADN02016519
EMBL:AADN02016520 IPI:IPI00600545 RefSeq:XP_420379.2
UniGene:Gga.14206 ProteinModelPortal:F1P037
Ensembl:ENSGALT00000015305 GeneID:422411 KEGG:gga:422411
NextBio:20825047 Uniprot:F1P037
Length = 497
Score = 234 (87.4 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 42/99 (42%), Positives = 71/99 (71%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+S+TLSCP++L L+P+D Q C +++ S+G+TTDDL F+W+ GDPVQ+ K + LP+F ++K
Sbjct: 177 LSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDIKK 235
Query: 195 FYTDYCN-SK--TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+Y N +K TG Y+C++V +R+ +Y++ +Y
Sbjct: 236 EDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 148 (57.2 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 38/109 (34%), Positives = 58/109 (53%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK ND+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDWRGS-DTLTVDPTMFKCLWKPDLFFANEKNANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTV-PQTPRKNCCRSWLAKF 105
N+ + I G VL S+ L C + +T+ P ++ C+ L F
Sbjct: 159 ENILLFIFRDGDVLVSMR-LSITLSCPLDLTLFPMDTQR--CKMQLESF 204
Score = 83 (34.3 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYWS 133
P+ +KRID+ +R FP F FN+ YWS
Sbjct: 467 PSAAKRIDLYARALFPFCFLFFNVIYWS 494
>UNIPROTKB|Q9GJS9 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0001964 "startle response" evidence=ISS]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016933 "extracellular-glycine-gated ion channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0005886 GO:GO:0007399 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
GO:GO:0016933 HOGENOM:HOG000231336 EMBL:AF268376 EMBL:AF268374
EMBL:AF268367 EMBL:AF268370 EMBL:AF268369 EMBL:AF268371
EMBL:AF268368 EMBL:AF268372 EMBL:AF268373 EMBL:BC123491
IPI:IPI00694047 RefSeq:NP_776496.1 UniGene:Bt.5975
ProteinModelPortal:Q9GJS9 PRIDE:Q9GJS9 GeneID:281198
KEGG:bta:281198 CTD:2743 eggNOG:NOG295166 InParanoid:Q9GJS9
KO:K05196 OrthoDB:EOG4HMJ97 NextBio:20805254 PANTHER:PTHR18945:SF29
Uniprot:Q9GJS9
Length = 497
Score = 234 (87.4 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 42/99 (42%), Positives = 71/99 (71%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+S+TLSCP++L L+P+D Q C +++ S+G+TTDDL F+W+ GDPVQ+ K + LP+F ++K
Sbjct: 177 LSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDIKK 235
Query: 195 FYTDYCN-SK--TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+Y N +K TG Y+C++V +R+ +Y++ +Y
Sbjct: 236 EDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/109 (33%), Positives = 58/109 (53%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTV-PQTPRKNCCRSWLAKF 105
N+ + I G VL S+ L C + +T+ P ++ C+ L F
Sbjct: 159 ENILLFIFRDGDVLVSMR-LSITLSCPLDLTLFPMDTQR--CKMQLESF 204
>UNIPROTKB|E2QS67 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AAEX03010077
RefSeq:XP_532701.1 Ensembl:ENSCAFT00000013690 GeneID:475477
KEGG:cfa:475477 NextBio:20851316 Uniprot:E2QS67
Length = 497
Score = 234 (87.4 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 42/99 (42%), Positives = 71/99 (71%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+S+TLSCP++L L+P+D Q C +++ S+G+TTDDL F+W+ GDPVQ+ K + LP+F ++K
Sbjct: 177 LSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDIKK 235
Query: 195 FYTDYCN-SK--TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+Y N +K TG Y+C++V +R+ +Y++ +Y
Sbjct: 236 EDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/109 (33%), Positives = 58/109 (53%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTV-PQTPRKNCCRSWLAKF 105
N+ + I G VL S+ L C + +T+ P ++ C+ L F
Sbjct: 159 ENILLFIFRDGDVLVSMR-LSITLSCPLDLTLFPMDTQR--CKMQLESF 204
>UNIPROTKB|P48167 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9606
"Homo sapiens" [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007340
"acrosome reaction" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0060013 "righting reflex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA;TAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IDA] [GO:0007218
"neuropeptide signaling pathway" evidence=IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007399
"nervous system development" evidence=IMP] [GO:0001964 "startle
response" evidence=IMP] [GO:0016594 "glycine binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_15518 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0051291 GO:GO:0007399 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 EMBL:CH471056 GO:GO:0060013
DrugBank:DB00145 GO:GO:0034707 GO:GO:0007628 GO:GO:0001964
HOVERGEN:HBG051707 Orphanet:3197 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0060012 TCDB:1.A.9.3.1 CTD:2743 eggNOG:NOG295166 KO:K05196
OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:U33267 EMBL:AF094754
EMBL:AF094755 EMBL:CD013911 EMBL:AK290617 EMBL:AC079403
EMBL:BC032635 IPI:IPI00008224 IPI:IPI00945266 PIR:G02031
RefSeq:NP_000815.1 RefSeq:NP_001159532.1 RefSeq:NP_001159533.1
UniGene:Hs.32973 ProteinModelPortal:P48167 SMR:P48167 STRING:P48167
PhosphoSite:P48167 DMDM:1346173 PRIDE:P48167 DNASU:2743
Ensembl:ENST00000264428 Ensembl:ENST00000509282
Ensembl:ENST00000541722 GeneID:2743 KEGG:hsa:2743 UCSC:uc003ipj.2
GeneCards:GC04P157997 HGNC:HGNC:4329 MIM:138492 MIM:614619
neXtProt:NX_P48167 PharmGKB:PA28730 InParanoid:P48167 OMA:PTMFKCL
PhylomeDB:P48167 GenomeRNAi:2743 NextBio:10812 ArrayExpress:P48167
Bgee:P48167 CleanEx:HS_GLRB Genevestigator:P48167
GermOnline:ENSG00000109738 Uniprot:P48167
Length = 497
Score = 234 (87.4 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 42/99 (42%), Positives = 71/99 (71%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+S+TLSCP++L L+P+D Q C +++ S+G+TTDDL F+W+ GDPVQ+ K + LP+F ++K
Sbjct: 177 LSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDIKK 235
Query: 195 FYTDYCN-SK--TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+Y N +K TG Y+C++V +R+ +Y++ +Y
Sbjct: 236 EDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/109 (33%), Positives = 58/109 (53%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTV-PQTPRKNCCRSWLAKF 105
N+ + I G VL S+ L C + +T+ P ++ C+ L F
Sbjct: 159 ENILLFIFRDGDVLVSMR-LSITLSCPLDLTLFPMDTQR--CKMQLESF 204
>UNIPROTKB|J9P134 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 PRINTS:PR00252 PROSITE:PS00236 GO:GO:0016021
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF63712 GeneTree:ENSGT00630000089571 EMBL:AAEX03008511
Ensembl:ENSCAFT00000044087 OMA:GREAHEM Uniprot:J9P134
Length = 246
Score = 143 (55.4 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 25/68 (36%), Positives = 45/68 (66%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y +++T C M+ +PLD Q+CSL++ SY +T DDL+ WK+G D ++ + + L +
Sbjct: 171 YSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQ 230
Query: 190 FTLEKFYT 197
F +++F+T
Sbjct: 231 FLIQEFHT 238
Score = 130 (50.8 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 160 MLRVQPDGKVLYSL 173
>UNIPROTKB|E1B988 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 KO:K05190 CTD:200959 OMA:MDFTMTF
EMBL:DAAA02000976 EMBL:DAAA02000977 IPI:IPI00686902
RefSeq:NP_001179448.1 UniGene:Bt.106502 ProteinModelPortal:E1B988
Ensembl:ENSBTAT00000001857 GeneID:520166 KEGG:bta:520166
NextBio:20873038 Uniprot:E1B988
Length = 468
Score = 147 (56.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 28/99 (28%), Positives = 60/99 (60%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLE 193
I+++ C M+ +PLD Q+CSL++ SY + +DL+ WK G+ + +++ L +F +E
Sbjct: 178 ITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFIE 237
Query: 194 KFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
+F + ++TG Y+ L ++ + +R ++++Q Y+
Sbjct: 238 EFSASSGFAFYSSTGWYNRLFINFVLRRHIFFFVLQTYF 276
Score = 137 (53.3 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ R W DERL + + ++W+PD+FF + K H+ + N+
Sbjct: 103 DFTMTFYLRHYWKDERLAFPSKTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTVENI 162
Query: 61 YIRIHPQGSVLYSI 74
+R+HP GSVL+S+
Sbjct: 163 MLRVHPDGSVLFSV 176
Score = 77 (32.2 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
ID SRI FP V+ +FNL YWS
Sbjct: 444 IDTYSRILFPTVYIMFNLFYWS 465
>RGD|621564 [details] [associations]
symbol:Gabrr3 "gamma-aminobutyric acid (GABA) A receptor, rho 3"
species:10116 "Rattus norvegicus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 RGD:621564 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 CTD:200959 EMBL:D50671 IPI:IPI00199472 PIR:S65756
RefSeq:NP_620252.1 UniGene:Rn.10670 ProteinModelPortal:P50573
Ensembl:ENSRNOT00000002281 GeneID:192258 KEGG:rno:192258
UCSC:RGD:621564 InParanoid:P50573 OMA:MDFTMTF OrthoDB:EOG41G343
BindingDB:P50573 ChEMBL:CHEMBL5454 NextBio:622926
Genevestigator:P50573 GermOnline:ENSRNOG00000001679 Uniprot:P50573
Length = 464
Score = 148 (57.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 29/106 (27%), Positives = 62/106 (58%)
Query: 128 NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLH 186
N+ + I+++ C M+ +PLD Q+CSL++ SY + +DL+ WK G+ + +++
Sbjct: 168 NVLFSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTEEHIS 227
Query: 187 LPRFTLEKFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
L +F +E+F + ++TG Y L ++ + +R ++++Q Y+
Sbjct: 228 LSQFFIEEFSASSGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYF 273
Score = 135 (52.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ R W DERL + + ++W+PD+FF + K H+ + N+
Sbjct: 100 DFTMTFYLRHYWKDERLSFPSTTNKSMTFDRRLIQKIWVPDIFFVHSKRSFIHDTTVENI 159
Query: 61 YIRIHPQGSVLYSI 74
+R+HP G+VL+S+
Sbjct: 160 MLRVHPDGNVLFSL 173
Score = 76 (31.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+V+ +FNL YW
Sbjct: 440 IDTYSRIVFPVVYIIFNLFYW 460
>WB|WBGene00001594 [details] [associations]
symbol:glc-4 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:FO080695 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231336 RefSeq:NP_495489.2 ProteinModelPortal:Q95QT7
SMR:Q95QT7 PaxDb:Q95QT7 EnsemblMetazoa:C27H5.8 GeneID:182971
KEGG:cel:CELE_C27H5.8 UCSC:C27H5.8 CTD:182971 WormBase:C27H5.8
eggNOG:NOG238729 InParanoid:Q95QT7 OMA:HEGANGA NextBio:919482
Uniprot:Q95QT7
Length = 500
Score = 231 (86.4 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 43/104 (41%), Positives = 66/104 (63%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLH-- 186
L Y ++L L+C M+L YP+D Q+C + ASY +TT D+ ++W + +Q+ + +
Sbjct: 170 LIYDRRLTLHLACSMHLSRYPMDHQNCEIAFASYAYTTADIEYIW-DVPAIQIHEGANGA 228
Query: 187 LPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
LP F + F C SKTNTG YSCLKV++ R FS++L+Q+Y
Sbjct: 229 LPNFEIASFKNASCTSKTNTGTYSCLKVEIRLNRVFSFFLLQLY 272
Score = 149 (57.5 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 28/104 (26%), Positives = 54/104 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRI-------KYLTLTEASRVWMPDLFFSNEKEGHFH 53
E+ Q FR++W D+RL++ ++ G + +++ + +W+PD FF NEK G +H
Sbjct: 94 EFVAQFRFRQEWYDDRLRFIEHQGLLSSDYRNFEFIHVARDQSLWIPDTFFQNEKNGWYH 153
Query: 54 NIIMPNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
+ N +++I G ++Y L C +H++ +NC
Sbjct: 154 MLNQENRFLKIRSDGKLIYD-RRLTLHLACSMHLSRYPMDHQNC 196
Score = 98 (39.6 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 108 RSKRIDVISRITFPLVFALFNLTYWS 133
R++RID+I+RI FPL F LFN YWS
Sbjct: 464 RAERIDIIARIIFPLAFILFNFAYWS 489
>UNIPROTKB|A8MPY1 [details] [associations]
symbol:GABRR3 "Gamma-aminobutyric acid receptor subunit
rho-3" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS;TAS]
[GO:0004890 "GABA-A receptor activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
KO:K05190 EMBL:AC026100 EMBL:Y18994 IPI:IPI00879466
RefSeq:NP_001099050.1 UniGene:Hs.534578 ProteinModelPortal:A8MPY1
SMR:A8MPY1 PhosphoSite:A8MPY1 PRIDE:A8MPY1 GeneID:200959
KEGG:hsa:200959 CTD:200959 GeneCards:GC03M097705 HGNC:HGNC:17969
neXtProt:NX_A8MPY1 PharmGKB:PA134952133 BindingDB:A8MPY1
ChEMBL:CHEMBL2394 GenomeRNAi:200959 NextBio:90035 CleanEx:HS_GABRR3
Genevestigator:A8MPY1 Uniprot:A8MPY1
Length = 467
Score = 149 (57.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 29/99 (29%), Positives = 59/99 (59%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLE 193
I+++ C M+ +PLD Q+CSL++ SY + DDL+ WK G+ + +++ L +F +E
Sbjct: 178 ITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHMSLSQFFIE 237
Query: 194 KFYTDYCNS-KTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F + ++TG Y+ L ++ + +R ++++Q Y+
Sbjct: 238 DFSASSGLAFYSSTGWYNRLFINFVLRRHVFFFVLQTYF 276
Score = 133 (51.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ R W DERL + + ++W+PD+FF + K H+ M N+
Sbjct: 103 DFTMTFYLRHYWKDERLSFPSTANKSMTFDHRLTRKIWVPDIFFVHSKRSFIHDTTMENI 162
Query: 61 YIRIHPQGSVLYSI 74
+R+HP G+VL S+
Sbjct: 163 MLRVHPDGNVLLSL 176
Score = 78 (32.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+V+ LFNL YW
Sbjct: 443 IDTYSRILFPIVYILFNLFYW 463
>ZFIN|ZDB-GENE-081104-30 [details] [associations]
symbol:gabra5 "gamma-aminobutyric acid (GABA) A
receptor, alpha 5" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-081104-30
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR405707 IPI:IPI00863519
ProteinModelPortal:F1QZ29 Ensembl:ENSDART00000104135 Uniprot:F1QZ29
Length = 491
Score = 145 (56.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERL + G ++ L L AS +W PD FF N K+ HN+ P
Sbjct: 131 EYTIDVFFRQSWKDERLCFK---GPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTP 187
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +R+ G++LY++ L +C + +
Sbjct: 188 NKLLRLKDDGTLLYTMR-LTISAECPMQL 215
Score = 137 (53.3 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV---KNL 185
L Y ++++ CPM L+ +P+D +C LK SY + ++++ W +G VV +
Sbjct: 199 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPISEVVYKWTKGPGKSVVVAEEGS 258
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
L ++ L + T+ G Y+ + KR+ Y++IQ Y
Sbjct: 259 RLNQYHLIGHTAGTEDISTSRGQYTVMMAHFYLKRKIGYFVIQTY 303
Score = 84 (34.6 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 111 RIDVISRITFPLVFALFNLTYWST 134
+ID +SRI FP++F FNL YW+T
Sbjct: 456 KIDKMSRIVFPVLFGTFNLVYWAT 479
>WB|WBGene00021146 [details] [associations]
symbol:lgc-45 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231336 KO:K05397
EMBL:FO081775 PIR:F88103 RefSeq:NP_494579.1 UniGene:Cel.14158
ProteinModelPortal:O44917 SMR:O44917 EnsemblMetazoa:W10G11.16
GeneID:189344 KEGG:cel:CELE_W10G11.16 UCSC:W10G11.16 CTD:189344
WormBase:W10G11.16 eggNOG:NOG308614 InParanoid:O44917 OMA:FTILGHE
NextBio:942068 Uniprot:O44917
Length = 327
Score = 145 (56.1 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 27/102 (26%), Positives = 55/102 (53%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKNLHLP 188
Y + + + SC + L YP D+Q+C L + S+ + + + F W + D + ++ LP
Sbjct: 72 YETRVKIKPSCNLILCKYPHDKQTCDLLIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLP 131
Query: 189 RFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++++ T C ++ +GA+SCL+ KR+ +++ Q Y
Sbjct: 132 ELYIDRYETTTCPNERKSGAFSCLRAVFRLKRDVGFHIAQTY 173
Score = 129 (50.5 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y + + W D RL N YD I ++W PD FF+N KE FH + N
Sbjct: 2 DYDMDIYLMMSWRDARL-VNPYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNF 60
Query: 61 YIRIHPQGSVLY 72
+RI P G VLY
Sbjct: 61 LMRIFPDGLVLY 72
Score = 47 (21.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 104 KFPTRSKRIDVISRITFPLVFALFNLTYW 132
++ + +D R+ +PL F LF L Y+
Sbjct: 284 RYHKTGRYLDNFCRVFYPLSFILFLLMYY 312
>ZFIN|ZDB-GENE-040801-106 [details] [associations]
symbol:glrbb "glycine receptor, beta b"
species:7955 "Danio rerio" [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IMP]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-040801-106 GO:GO:0016021 GO:GO:0034613 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 eggNOG:NOG295166
KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:CR456621
EMBL:BC078269 EMBL:AB195560 IPI:IPI00486645 RefSeq:NP_001003587.1
UniGene:Dr.83354 SMR:Q6DC22 STRING:Q6DC22
Ensembl:ENSDART00000074685 GeneID:445193 KEGG:dre:445193 CTD:445193
InParanoid:Q6DC22 OMA:QHARITE NextBio:20831954 Uniprot:Q6DC22
Length = 494
Score = 226 (84.6 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 40/99 (40%), Positives = 70/99 (70%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+S+TLSCP++L L+P+D Q C +++ S+G+TTDDL F+W+ GDPVQ+ + LP+F +++
Sbjct: 176 LSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQSGDPVQM-DEIALPQFDIKQ 234
Query: 195 FYTDYCN-SK--TNTGAYSCLKVDLLFKREFSYYLIQIY 230
+Y N +K TG Y+C++V +R+ +Y++ +Y
Sbjct: 235 EDIEYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVY 273
Score = 134 (52.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
+Y V + R++W D RL+ D + LT+ +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQRWNDPRLRLPQ-DFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQE 158
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTV-PQTPRKNCCRSWLAKF 105
N+ + I G VL S+ L C + +T+ P ++ C+ L F
Sbjct: 159 NILLFIFRNGDVLISMR-LSVTLSCPLDLTLFPMDTQR--CKMQLESF 203
Score = 82 (33.9 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYWS 133
P+ +KRID+ +R FP F FN+ YWS
Sbjct: 464 PSAAKRIDLYARALFPFSFLFFNVIYWS 491
>UNIPROTKB|G3MWU9 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
EMBL:DAAA02068166 Ensembl:ENSBTAT00000065531 Uniprot:G3MWU9
Length = 495
Score = 175 (66.7 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 36/89 (40%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ +TF + W DERL++N G + L+ S +W+PD FF N K + H+I MP
Sbjct: 116 EYTIDITFCQTWYDERLRFN---GSFESFVLSGNLVSLLWVPDTFFRNSKRTYEHSITMP 172
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RIH G VLY+I + C +HM
Sbjct: 173 NQMVRIHKDGKVLYTIR-MTIEAGCSLHM 200
Score = 68 (29.0 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
R+D SR+ FP+ F FN+ YW
Sbjct: 468 RLDNYSRVIFPVTFFFFNVIYW 489
>UNIPROTKB|F1MU41 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:DAAA02068166 IPI:IPI00698565
Ensembl:ENSBTAT00000018017 Uniprot:F1MU41
Length = 508
Score = 175 (66.7 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 36/89 (40%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ +TF + W DERL++N G + L+ S +W+PD FF N K + H+I MP
Sbjct: 115 EYTIDITFCQTWYDERLRFN---GSFESFVLSGNLVSLLWVPDTFFRNSKRTYEHSITMP 171
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N +RIH G VLY+I + C +HM
Sbjct: 172 NQMVRIHKDGKVLYTIR-MTIEAGCSLHM 199
Score = 68 (29.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
R+D SR+ FP+ F FN+ YW
Sbjct: 481 RLDNYSRVIFPVTFFFFNVIYW 502
>UNIPROTKB|F1MDL0 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 PANTHER:PTHR18945:SF29 OMA:PTMFKCL
EMBL:DAAA02044907 EMBL:DAAA02044902 EMBL:DAAA02044903
EMBL:DAAA02044904 EMBL:DAAA02044905 EMBL:DAAA02044906
IPI:IPI01028074 Ensembl:ENSBTAT00000029010 Uniprot:F1MDL0
Length = 497
Score = 214 (80.4 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 40/100 (40%), Positives = 68/100 (68%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLE- 193
+S+TLSCP++L L+P+D Q C +++ S+G+TTDDL F+W+ GDPVQ+ K + LP+F ++
Sbjct: 177 LSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDIKY 235
Query: 194 ---KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
KF + K T Y+C++V +R+ +Y++ +Y
Sbjct: 236 EGLKFLGCHLYFK-GTWYYTCVEVIFTLRRQVGFYMMGVY 274
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/109 (33%), Positives = 58/109 (53%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTL--TEASRVWMPDLFFSNEKEGHFHNIIM 57
+Y V + R++W D RLK +D+ G LT+ T +W PDLFF+NEK +FH++
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGS-DALTVDPTMYKCLWKPDLFFANEKSANFHDVTQ 158
Query: 58 PNVYIRIHPQGSVLYSISDLDNMRQCEVHMTV-PQTPRKNCCRSWLAKF 105
N+ + I G VL S+ L C + +T+ P ++ C+ L F
Sbjct: 159 ENILLFIFRDGDVLVSMR-LSITLSCPLDLTLFPMDTQR--CKMQLESF 204
>WB|WBGene00017389 [details] [associations]
symbol:lgc-38 species:6239 "Caenorhabditis elegans"
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:FO080391
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706 KO:K05195
HOGENOM:HOG000231336 PIR:T16035 RefSeq:NP_498532.3
ProteinModelPortal:Q19358 SMR:Q19358 PaxDb:Q19358
EnsemblMetazoa:F11H8.2 GeneID:3565717 KEGG:cel:CELE_F11H8.2
UCSC:F11H8.2 CTD:3565717 WormBase:F11H8.2 InParanoid:Q19358
OMA:RESIIEP NextBio:957591 Uniprot:Q19358
Length = 459
Score = 213 (80.0 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 40/97 (41%), Positives = 62/97 (63%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEK 194
+++T +CPM+L +PLDRQ C+L++ SYG++T D+I+ W + V + +N+HL FT+ +
Sbjct: 170 LTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGTNAVTIDENVHLAHFTIGE 229
Query: 195 FYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
+TG YS L LFKR +YLIQIY+
Sbjct: 230 HKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYF 266
Score = 129 (50.5 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 1 EYSVQLTFREQWLDERLKY-NDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
+Y++ L R+ W D RL + +D + + + + +W PD FF NEK+ FH N
Sbjct: 95 DYTLDLYLRQIWKDPRLAWESDVEDSLT-IGIDMVKTIWTPDTFFPNEKKSFFHEATSHN 153
Query: 60 VYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
++RI G+VL SI L C + + R+ C
Sbjct: 154 SFLRIDNHGNVLRSIR-LTVTANCPMSLHTFPLDRQEC 190
Score = 75 (31.5 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWS 133
+P P K +W K R ++D+ SR FP+ F +F++ YW+
Sbjct: 413 MPPIPFKPQNGAW-GK--VRPAQVDLFSRFAFPIFFVIFHIVYWT 454
>UNIPROTKB|E1BW41 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 IPI:IPI00589447
Ensembl:ENSGALT00000027028 ArrayExpress:E1BW41 Uniprot:E1BW41
Length = 397
Score = 204 (76.9 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 40/101 (39%), Positives = 62/101 (61%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 72 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQ 131
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ ++ N TGAY L + KR Y+++Q Y
Sbjct: 132 FSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTY 172
Score = 145 (56.1 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y G LTL A ++W+PD +F N+K+ H + +
Sbjct: 2 DYTLTMYFQQYWRDKRLAYA---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 58
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 59 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 96
Score = 72 (30.4 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP F+LFNL YW
Sbjct: 362 KIPDLTDVNAIDRWSRMVFPFTFSLFNLIYW 392
>UNIPROTKB|Q90590 [details] [associations]
symbol:GABARB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335
OrthoDB:EOG45756F HSSP:P23415 EMBL:AADN02035869 EMBL:AADN02035870
EMBL:AADN02035871 EMBL:AADN02035872 EMBL:AADN02035873
EMBL:AADN02035874 EMBL:X72806 IPI:IPI00594639 PIR:JH0828
UniGene:Gga.734 Ensembl:ENSGALT00000002584 Uniprot:Q90590
Length = 430
Score = 203 (76.5 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V + LP+
Sbjct: 150 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQ 209
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N +TGAY L + KR Y+++Q Y
Sbjct: 210 FSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTY 250
Score = 150 (57.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 139 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 174
>UNIPROTKB|P19019 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F EMBL:X54243 IPI:IPI00591128 PIR:S11440
RefSeq:NP_990677.1 UniGene:Gga.747 ProteinModelPortal:P19019
SMR:P19019 GeneID:396290 KEGG:gga:396290 CTD:2562 InParanoid:P19019
NextBio:20816341 ArrayExpress:P19019 Uniprot:P19019
Length = 476
Score = 204 (76.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 40/101 (39%), Positives = 62/101 (61%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ ++ N TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 145 (56.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQYWRDKRLAYA---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 72 (30.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP F+LFNL YW
Sbjct: 441 KIPDLTDVNAIDRWSRMVFPFTFSLFNLIYW 471
>ZFIN|ZDB-GENE-070424-211 [details] [associations]
symbol:si:dkey-169l5.3 "si:dkey-169l5.3"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-070424-211 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CABZ01006845
EMBL:CABZ01006846 EMBL:CABZ01006847 EMBL:CABZ01006848
EMBL:CABZ01006849 EMBL:CABZ01006850 EMBL:CABZ01006851
EMBL:CABZ01006852 EMBL:CABZ01006853 EMBL:CABZ01006854
EMBL:CABZ01006855 EMBL:CR932985 IPI:IPI00934600
Ensembl:ENSDART00000064718 Uniprot:F1Q4Y6
Length = 512
Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/101 (38%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD++F W+ GD V V L LP+
Sbjct: 152 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQ 211
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TG+Y L + KR Y+++Q Y
Sbjct: 212 FSIVELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTY 252
Score = 150 (57.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL Y + + L A ++W+PD +F N+K+ H + + N
Sbjct: 82 DYTITMYFQQSWRDKRLAYAEMALNLT-LDNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 140
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 141 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 176
Score = 72 (30.4 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP+ F FNL YW
Sbjct: 477 KIPNLTDVSTIDKWSRIIFPITFGFFNLIYW 507
>UNIPROTKB|F1NB54 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:TSSIQYR EMBL:AADN02035869
EMBL:AADN02035870 EMBL:AADN02035871 EMBL:AADN02035872
EMBL:AADN02035873 EMBL:AADN02035874 IPI:IPI00587146
Ensembl:ENSGALT00000011745 Uniprot:F1NB54
Length = 475
Score = 203 (76.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N +TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTY 251
Score = 150 (57.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 81 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 140 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 72 (30.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+VF+ FN+ YW
Sbjct: 450 IDRWSRIFFPVVFSFFNIVYW 470
>ZFIN|ZDB-GENE-090313-230 [details] [associations]
symbol:si:dkey-20i10.4 "si:dkey-20i10.4"
species:7955 "Danio rerio" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-090313-230 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CT025771
EMBL:CU469104 IPI:IPI00923251 ProteinModelPortal:F1QPW7
Ensembl:ENSDART00000108535 Uniprot:F1QPW7
Length = 484
Score = 203 (76.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ G V V N+ LP+F
Sbjct: 159 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQF 218
Query: 191 TLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
++ + T TG+Y L + KR Y+++Q Y
Sbjct: 219 SIIDYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTY 258
Score = 151 (58.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y G LTL A ++W+PD +F N+K+ H + +
Sbjct: 89 DYTITMYFQQSWRDKRLSYT---GIPLNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVK 145
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 146 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 183
Score = 74 (31.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 90 PQTPRKNCCRSWLA----KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
P P+K+ R A K P T ID SR+ FP+ + FNL YW
Sbjct: 431 PLAPKKSRLRRRAAQLKVKIPDLTDVNAIDKWSRVIFPITYTFFNLVYW 479
>UNIPROTKB|F5H3D2 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05181
CTD:2562 RefSeq:NP_001178249.1 UniGene:Hs.302352 DNASU:2562
GeneID:2562 KEGG:hsa:2562 HGNC:HGNC:4083 ChiTaRS:GABRB3
GenomeRNAi:2562 NextBio:10121 EMBL:AC009878 EMBL:AC011196
EMBL:AC104569 EMBL:AC127511 EMBL:AC135999 EMBL:AC145167
EMBL:AC145196 EMBL:EU606048 IPI:IPI00975640
ProteinModelPortal:F5H3D2 SMR:F5H3D2 PRIDE:F5H3D2
Ensembl:ENST00000545868 ArrayExpress:F5H3D2 Bgee:F5H3D2
Uniprot:F5H3D2
Length = 388
Score = 200 (75.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 66 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 125
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 126 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 166
Score = 138 (53.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 8 FREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIH 65
F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + + N IR+H
Sbjct: 3 FQQYWRDKRLAYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 66 PQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
P G+VLY + + C + + +NC
Sbjct: 60 PDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 90
Score = 76 (31.8 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP F+LFNL YW
Sbjct: 353 KIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 383
>UNIPROTKB|F1MAU5 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:DAAA02051680 EMBL:DAAA02051681 EMBL:DAAA02051682
IPI:IPI00695874 Ensembl:ENSBTAT00000017858 ArrayExpress:F1MAU5
Uniprot:F1MAU5
Length = 392
Score = 200 (75.5 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 71 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 130
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 131 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 171
Score = 148 (57.2 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 1 DYTLTMYFQQYWRDKRLAYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 57
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 58 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 95
Score = 76 (31.8 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP F+LFNL YW
Sbjct: 357 KIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 387
>ZFIN|ZDB-GENE-101102-2 [details] [associations]
symbol:gabrb3 "gamma-aminobutyric acid (GABA) A
receptor, beta 3" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-101102-2 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:BX927286 EMBL:CR405707 IPI:IPI00898271
Ensembl:ENSDART00000087300 Uniprot:E7EXG0
Length = 532
Score = 203 (76.5 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F WK G+ V V + LP+
Sbjct: 185 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQ 244
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N +TGAY L + KR Y+++Q Y
Sbjct: 245 FSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTY 285
Score = 147 (56.8 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y G LTL A ++W+PD +F N+K+ H + +
Sbjct: 115 DYTLTMYFQQYWRDKRLAYT---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 171
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 172 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 209
Score = 77 (32.2 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 18/31 (58%), Positives = 19/31 (61%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP VF+LFNL YW
Sbjct: 497 KIPDLTDVNAIDRWSRIIFPAVFSLFNLIYW 527
>UNIPROTKB|F1LRQ0 [details] [associations]
symbol:Gabrb3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
RGD:2651 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00950928
Ensembl:ENSRNOT00000065223 ArrayExpress:F1LRQ0 Uniprot:F1LRQ0
Length = 402
Score = 200 (75.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 80 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 139
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 140 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 180
Score = 148 (57.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 10 DYTLTMYFQQYWRDKRLAYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 66
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 67 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 104
Score = 76 (31.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP F+LFNL YW
Sbjct: 367 KIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 397
>MGI|MGI:103156 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
MGI:MGI:103156 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH466524 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X55272 EMBL:AK034332
EMBL:AK047752 EMBL:AK049956 EMBL:AK038468 EMBL:AC068252
EMBL:AC092716 EMBL:BC099939 IPI:IPI00308300 IPI:IPI00387194
RefSeq:NP_034382.2 UniGene:Mm.255292 ProteinModelPortal:Q9R0Y8
STRING:Q9R0Y8 PhosphoSite:Q9R0Y8 PRIDE:Q9R0Y8
Ensembl:ENSMUST00000031119 GeneID:14405 KEGG:mmu:14405
BindingDB:Q9R0Y8 ChEMBL:CHEMBL2891 NextBio:285967
Genevestigator:Q9R0Y8 GermOnline:ENSMUSG00000001260 Uniprot:Q9R0Y8
Length = 465
Score = 144 (55.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + F + W D RLK+N ++ L ++W+PD FF N ++ H I PN
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNS-TMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNR 166
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLY++
Sbjct: 167 LLRIWSDGRVLYTL 180
Score = 110 (43.8 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 134 TISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV--KNLHLPR 189
T+ LT++ C + L +P+D SC L+ +SYG+ +++ + WK+ V+V K L +
Sbjct: 179 TLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPS-VEVADPKYWRLYQ 237
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F S T +G Y + + R Y+ IQ Y
Sbjct: 238 FAFVGLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTY 278
Score = 88 (36.0 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 98 CR--SWL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR SW + R +ID SRI FP FALFNL YW
Sbjct: 422 CRTGSWREGRIHIRIAKIDSYSRIFFPTAFALFNLVYW 459
>RGD|621732 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor, gamma
1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IPI] InterPro:IPR005437 InterPro:IPR005438
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621
PROSITE:PS00236 RGD:621732 GO:GO:0005886 GO:GO:0016020
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0043235
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X57514 IPI:IPI00211960
PIR:S12056 RefSeq:NP_542153.1 UniGene:Rn.10366
ProteinModelPortal:P23574 STRING:P23574 PRIDE:P23574
Ensembl:ENSRNOT00000003240 GeneID:140674 KEGG:rno:140674
UCSC:RGD:621732 InParanoid:P23574 BindingDB:P23574 ChEMBL:CHEMBL296
NextBio:620667 Genevestigator:P23574 GermOnline:ENSRNOG00000002360
Uniprot:P23574
Length = 465
Score = 144 (55.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + F + W D RLK+N ++ L ++W+PD FF N ++ H I PN
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNS-TMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNR 166
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLY++
Sbjct: 167 LLRIWSDGRVLYTL 180
Score = 110 (43.8 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 134 TISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV--KNLHLPR 189
T+ LT++ C + L +P+D SC L+ +SYG+ +++ + WK+ V+V K L +
Sbjct: 179 TLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPS-VEVADPKYWRLYQ 237
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F S T +G Y + + R Y+ IQ Y
Sbjct: 238 FAFVGLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTY 278
>UNIPROTKB|J9P3X1 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:AAEX03002176 EMBL:AAEX03002177 EMBL:AAEX03002178
Ensembl:ENSCAFT00000043201 Uniprot:J9P3X1
Length = 409
Score = 200 (75.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 87 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 146
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 147 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 187
Score = 148 (57.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 17 DYTLTMYFQQYWRDKRLAYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 73
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 74 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 111
Score = 76 (31.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP F+LFNL YW
Sbjct: 374 KIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 404
>ZFIN|ZDB-GENE-030131-8196 [details] [associations]
symbol:gabrb2 "gamma-aminobutyric acid (GABA) A
receptor, beta 2" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-030131-8196
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 KO:K05181 CTD:2561 HSSP:P23415 EMBL:AJ302649
IPI:IPI00852026 RefSeq:NP_001019558.2 UniGene:Dr.132858
ProteinModelPortal:Q9DDD9 SMR:Q9DDD9 GeneID:336252 KEGG:dre:336252
InParanoid:Q9DDD9 NextBio:20811647 Uniprot:Q9DDD9
Length = 519
Score = 202 (76.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 39/101 (38%), Positives = 62/101 (61%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 149 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQ 208
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N +TG+Y L + KR Y+++Q Y
Sbjct: 209 FSIVGYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTY 249
Score = 150 (57.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL Y++ + L A ++W+PD +F N+K+ H + + N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYSEIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 137
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 138 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 173
Score = 66 (28.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SR+ FP +F+ FN+ YW
Sbjct: 494 IDKWSRMIFPTLFSFFNIVYW 514
>UNIPROTKB|Q7LZ70 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 HSSP:P23415 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:AC147646 IPI:IPI00600373
PIR:JH0824 RefSeq:XP_420725.2 UniGene:Gga.5062
Ensembl:ENSGALT00000022976 GeneID:422771 KEGG:gga:422771
InParanoid:Q7LZ70 NextBio:20825358 Uniprot:Q7LZ70
Length = 464
Score = 144 (55.7 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + F + W D RLK+N ++ L ++W+PD FF N ++ H I PN
Sbjct: 104 EYTIDIIFAQTWYDSRLKFNS-SMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNR 162
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLY++
Sbjct: 163 LLRIWSDGRVLYTL 176
Score = 109 (43.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 134 TISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVV--KNLHLPR 189
T+ LT++ C + L +P+D SC L+ +SYG+ +++ + WK+ V+V K L +
Sbjct: 175 TLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTS-VEVADPKYWRLYQ 233
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F S T +G Y + + R Y+ IQ Y
Sbjct: 234 FAFVGLRNTTEISHTLSGDYIIMTIFFDLSRRMGYFTIQTY 274
Score = 94 (38.1 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 62 IRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC---------CR--SWL-AKFPTRS 109
I + P GS L I++++N+ + + K+C CR SW + R
Sbjct: 377 IAVRP-GSTLIPINNINNLPERDDDYGYECLEGKDCASFFCCFEDCRTGSWREGRIHIRI 435
Query: 110 KRIDVISRITFPLVFALFNLTYW 132
+ID SRI FP FALFNL YW
Sbjct: 436 AKIDSYSRIFFPTAFALFNLVYW 458
>UNIPROTKB|P28472 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0090102 "cochlea development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 Orphanet:106 Orphanet:64280
DrugBank:DB00683 HOVERGEN:HBG051707 DrugBank:DB00189
DrugBank:DB00690 eggNOG:NOG77438 KO:K05181 OrthoDB:EOG45756F
CTD:2562 EMBL:M82919 EMBL:BC010641 EMBL:L04311 IPI:IPI00003467
IPI:IPI00217235 PIR:A55275 PIR:B45468 RefSeq:NP_000805.1
RefSeq:NP_001178249.1 RefSeq:NP_001178250.1 RefSeq:NP_068712.1
UniGene:Hs.302352 ProteinModelPortal:P28472 SMR:P28472
IntAct:P28472 STRING:P28472 PhosphoSite:P28472 DMDM:120773
PaxDb:P28472 PRIDE:P28472 DNASU:2562 Ensembl:ENST00000299267
Ensembl:ENST00000311550 GeneID:2562 KEGG:hsa:2562 UCSC:uc001zaz.3
UCSC:uc001zba.3 GeneCards:GC15M026788 HGNC:HGNC:4083 MIM:137192
MIM:612269 neXtProt:NX_P28472 PharmGKB:PA28497 PhylomeDB:P28472
BindingDB:P28472 ChEMBL:CHEMBL1847 ChiTaRS:GABRB3 GenomeRNAi:2562
NextBio:10121 ArrayExpress:P28472 Bgee:P28472 CleanEx:HS_GABRB3
Genevestigator:P28472 GermOnline:ENSG00000166206 Uniprot:P28472
Length = 473
Score = 200 (75.5 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 148 (57.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQYWRDKRLAYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 76 (31.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP F+LFNL YW
Sbjct: 438 KIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 468
>MGI|MGI:95621 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0051932
"synaptic transmission, GABAergic" evidence=ISO] [GO:0060077
"inhibitory synapse" evidence=ISO] [GO:0060119 "inner ear receptor
cell development" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95621 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2562 ChiTaRS:GABRB3 EMBL:U14420 EMBL:AK039070
EMBL:AK147247 IPI:IPI00130546 PIR:S53532 RefSeq:NP_032097.1
UniGene:Mm.8004 ProteinModelPortal:P63080 SMR:P63080 STRING:P63080
PaxDb:P63080 PRIDE:P63080 DNASU:14402 Ensembl:ENSMUST00000039697
GeneID:14402 KEGG:mmu:14402 UCSC:uc011xte.1 BindingDB:P63080
ChEMBL:CHEMBL4231 NextBio:285953 Bgee:P63080 Genevestigator:P63080
GermOnline:ENSMUSG00000033676 Uniprot:P63080
Length = 473
Score = 200 (75.5 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 148 (57.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQYWRDKRLAYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 76 (31.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP F+LFNL YW
Sbjct: 438 KIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 468
>RGD|2651 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor, beta 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=IPI] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
[GO:0060077 "inhibitory synapse" evidence=IDA] [GO:0060119 "inner ear
receptor cell development" evidence=ISO] [GO:0060384 "innervation"
evidence=ISO] [GO:0090102 "cochlea development" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2651 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043195
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 CTD:2562 EMBL:X15468
EMBL:L04310 IPI:IPI00327083 PIR:S04466 RefSeq:NP_058761.1
UniGene:Rn.208228 ProteinModelPortal:P63079 SMR:P63079 IntAct:P63079
STRING:P63079 PRIDE:P63079 GeneID:24922 KEGG:rno:24922 UCSC:RGD:2651
InParanoid:P63079 BindingDB:P63079 ChEMBL:CHEMBL316 NextBio:604867
ArrayExpress:P63079 Genevestigator:P63079
GermOnline:ENSRNOG00000014938 GO:GO:0060077 Uniprot:P63079
Length = 473
Score = 200 (75.5 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 148 (57.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQYWRDKRLAYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 76 (31.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP F+LFNL YW
Sbjct: 438 KIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 468
>RGD|68320 [details] [associations]
symbol:Gabre "gamma-aminobutyric acid (GABA) A receptor, epsilon"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=TAS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEP] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008099 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01723 PROSITE:PS00236 RGD:68320 GO:GO:0005886 GO:GO:0042493
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
GO:GO:0006821 HOVERGEN:HBG051707 EMBL:AF255612 EMBL:U92284
IPI:IPI00191361 UniGene:Rn.54455 ProteinModelPortal:Q9ES14
PRIDE:Q9ES14 eggNOG:NOG148905 BindingDB:Q9ES14 ChEMBL:CHEMBL306
ArrayExpress:Q9ES14 Genevestigator:Q9ES14 Uniprot:Q9ES14
Length = 506
Score = 166 (63.5 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 1 EYSVQLTFREQWLDERLKYND-YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EYS+ + F + W DERL+YND ++ I + + S++W+PD FF N K ++I +PN
Sbjct: 116 EYSIDIIFYQTWYDERLRYNDTFETLILHGNVV--SQLWIPDTFFRNSKRTQEYDITIPN 173
Query: 60 VYIRIHPQGSVLYSISDLDNMRQCEVHM 87
IH G VLY++ + R C +HM
Sbjct: 174 QMALIHKDGKVLYTVRMTIDAR-CSLHM 200
Score = 72 (30.4 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 111 RIDVISRITFPLVFALFNLTYWSTISLTL 139
R+D SR+ FP+ F FN+ YW I L L
Sbjct: 479 RLDNYSRVLFPITFFFFNVVYW-VICLNL 506
>UNIPROTKB|E2QVM5 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
CTD:2564 KO:K05185 OMA:LYTIRMT EMBL:AAEX03027052 RefSeq:XP_549340.3
Ensembl:ENSCAFT00000030414 GeneID:492220 KEGG:cfa:492220
NextBio:20864837 Uniprot:E2QVM5
Length = 488
Score = 163 (62.4 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 1 EYSVQLTFREQWLDERLKYN-DYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EY++ +TF + W DERL+YN ++ + L S++W+PD F N K H I MPN
Sbjct: 110 EYTIDITFCQTWYDERLRYNGSFESFV--LNGNMVSQLWIPDTVFRNSKRTQEHVITMPN 167
Query: 60 VYIRIHPQGSVLYSI 74
+RIH G VLY+I
Sbjct: 168 QMVRIHKDGKVLYTI 182
Score = 79 (32.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 23/103 (22%), Positives = 46/103 (44%)
Query: 134 TISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFT 191
TI +T+ C + + +P+D SC L +S+ + ++I+ W E +Q+ + F
Sbjct: 181 TIRMTIDAGCLLYMLKFPMDSHSCPLSFSSFSYPESEMIYKW-ENFKLQIDERNTWKLFQ 239
Query: 192 LEKFYTDYCNS----KTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ +T N+ T G ++ + + R F + Q Y
Sbjct: 240 FD--FTGVTNTTETISTPAGDFTVMTLYFNVSRRFGFVAFQNY 280
Score = 68 (29.0 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
R+D SR+ FP+ F FN+ YW
Sbjct: 461 RLDNYSRVIFPVTFFFFNVLYW 482
>UNIPROTKB|F5H7N0 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4083 ChiTaRS:GABRB3
EMBL:AC009878 EMBL:AC011196 EMBL:AC104569 EMBL:AC127511
EMBL:AC135999 EMBL:AC145167 EMBL:AC145196 EMBL:EU606048
IPI:IPI00470817 ProteinModelPortal:F5H7N0 SMR:F5H7N0
Ensembl:ENST00000541819 UCSC:uc001zbb.3 OMA:FYAIYET
ArrayExpress:F5H7N0 Bgee:F5H7N0 Uniprot:F5H7N0
Length = 529
Score = 200 (75.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 40/101 (39%), Positives = 61/101 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 207 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQ 266
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N TGAY L + KR Y+++Q Y
Sbjct: 267 FSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTY 307
Score = 148 (57.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 137 DYTLTMYFQQYWRDKRLAYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 193
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 194 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 231
Score = 76 (31.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP F+LFNL YW
Sbjct: 494 KIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 524
>FB|FBgn0003011 [details] [associations]
symbol:ort "ora transientless" species:7227 "Drosophila
melanogaster" [GO:0019182 "histamine-gated chloride channel
activity" evidence=ISS;NAS] [GO:0019183 "histamine-gated chloride
channel complex" evidence=NAS] [GO:0007268 "synaptic transmission"
evidence=IMP] [GO:0045472 "response to ether" evidence=IMP]
[GO:0009636 "response to toxic substance" evidence=IMP] [GO:0030534
"adult behavior" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043052
"thermotaxis" evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0009636 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030534 GO:GO:0043052
GO:GO:0045472 eggNOG:NOG295166 InterPro:IPR015680
PANTHER:PTHR18945:SF26 ChiTaRS:oc EMBL:AY672639
ProteinModelPortal:A1KYB3 SMR:A1KYB3 STRING:A1KYB3 PRIDE:A1KYB3
FlyBase:FBgn0003011 InParanoid:A1KYB3 OrthoDB:EOG4F4QSD Bgee:A1KYB3
GO:GO:0019182 Uniprot:A1KYB3
Length = 485
Score = 199 (75.1 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 40/102 (39%), Positives = 56/102 (54%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLP 188
+ Y ++L LSC MN +YP D Q C L++ S TTDDLIF W P+ V +N+ LP
Sbjct: 143 ILYMVKLTLKLSCIMNFAIYPHDTQECKLQVESLSHTTDDLIFQWDPTTPLVVDENIELP 202
Query: 189 RFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L + T C +TG ++CL+V KR YY+ Y
Sbjct: 203 QVALIRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTY 244
Score = 102 (41.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 23/97 (23%), Positives = 42/97 (43%)
Query: 2 YSVQLTFREQWLDERLKY-NDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
Y + F + W D RL+ + + L + +W PD FF N K F + +PN
Sbjct: 74 YVADVFFAQTWKDHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNH 133
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
Y+ ++ ++LY + L C ++ + + C
Sbjct: 134 YMWLYKDKTILYMVK-LTLKLSCIMNFAIYPHDTQEC 169
Score = 61 (26.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 90 PQTPRKNCCRSWLAKFPTRSKR---IDVISRITFPLVFALFNLTYW 132
P P + L R KR ID SR+ FP +FA N YW
Sbjct: 433 PAAPEPELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNGIYW 478
>ZFIN|ZDB-GENE-111215-5 [details] [associations]
symbol:gabrb2l "gamma-aminobutyric acid (GABA) A
receptor, beta 2 like" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-111215-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG265706 EMBL:BC142872 IPI:IPI00854121 UniGene:Dr.111185
ProteinModelPortal:A5PLE3 Uniprot:A5PLE3
Length = 427
Score = 197 (74.4 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 38/101 (37%), Positives = 62/101 (61%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ G+ V V+ + LP+
Sbjct: 152 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGNHAVTGVERIELPQ 211
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + N +TG+Y L + KR Y+++Q Y
Sbjct: 212 FSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTY 252
Score = 150 (57.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL Y++ + L A ++W+PD +F N+K+ H + + N
Sbjct: 82 DYTLTMYFQQAWRDKRLSYSEIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 140
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 141 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 176
>UNIPROTKB|P24045 [details] [associations]
symbol:GABRB4 "Gamma-aminobutyric acid receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 EMBL:X56647 EMBL:X56648 EMBL:X56646
IPI:IPI00571160 IPI:IPI00596309 PIR:JH0359 RefSeq:NP_001161175.1
RefSeq:NP_001161176.1 UniGene:Gga.428 ProteinModelPortal:P24045
SMR:P24045 PRIDE:P24045 Ensembl:ENSGALT00000011746 GeneID:396288
KEGG:gga:396288 CTD:55879 InParanoid:P24045 OMA:ANNERHR
OrthoDB:EOG40S0FS NextBio:20816339 Uniprot:P24045
Length = 488
Score = 185 (70.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/101 (36%), Positives = 60/101 (59%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD+Q+C+L++ SYG+T DD++F W+ D V ++ L LP+
Sbjct: 150 YGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQ 209
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
FT+ + TG+Y L + KR Y+++Q Y
Sbjct: 210 FTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTY 250
Score = 164 (62.8 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 30/97 (30%), Positives = 54/97 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YND + L A ++W+PD +F N+K+ H + + N
Sbjct: 80 DYTITMYFQQSWRDKRLAYNDLPLNLT-LDNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 138
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + ++NC
Sbjct: 139 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDQQNC 174
Score = 73 (30.8 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SRI FP+ F FNL YW
Sbjct: 453 KIPDLTDVSTIDKWSRIIFPITFGFFNLVYW 483
>UNIPROTKB|F1PEG2 [details] [associations]
symbol:GABRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:YRKPMSS EMBL:AAEX03009038 Ensembl:ENSCAFT00000002993
Uniprot:F1PEG2
Length = 390
Score = 194 (73.4 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 66 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 125
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 126 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 166
Score = 140 (54.3 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 8 FREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIH 65
F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + + N IR+H
Sbjct: 3 FQQSWKDKRLSYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 66 PQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
P G+VLY + + C + + +NC
Sbjct: 60 PDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 90
Score = 71 (30.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP+ F+LFN+ YW
Sbjct: 355 KIPDLTDVNSIDKWSRMFFPITFSLFNVVYW 385
>UNIPROTKB|F5GXV5 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AC107383 HGNC:HGNC:4081
EMBL:AC097712 EMBL:AC105394 EMBL:AC107392 IPI:IPI01009264
ProteinModelPortal:F5GXV5 SMR:F5GXV5 Ensembl:ENST00000538619
UCSC:uc011bze.2 ArrayExpress:F5GXV5 Bgee:F5GXV5 Uniprot:F5GXV5
Length = 404
Score = 194 (73.4 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 81 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 140
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 141 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 181
Score = 150 (57.9 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 11 DYTLTMYFQQSWKDKRLSYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 67
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 68 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 105
Score = 71 (30.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP+ F+LFN+ YW
Sbjct: 369 KIPDLTDVNSIDKWSRMFFPITFSLFNVVYW 399
>UNIPROTKB|P08220 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 EMBL:X05718 IPI:IPI00718227 PIR:B27142
RefSeq:NP_776969.1 UniGene:Bt.173 ProteinModelPortal:P08220
SMR:P08220 PRIDE:P08220 Ensembl:ENSBTAT00000023711 GeneID:282239
KEGG:bta:282239 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 InParanoid:P08220
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F BindingDB:P08220
ChEMBL:CHEMBL2848 NextBio:20806058 Uniprot:P08220
Length = 474
Score = 194 (73.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 150 (57.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQSWKDKRLSYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 71 (30.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP+ F+LFN+ YW
Sbjct: 439 KIPDLTDVNSIDKWSRMFFPITFSLFNVVYW 469
>UNIPROTKB|P18505 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0042698 "ovulation cycle" evidence=IEA] [GO:0043235 "receptor
complex" evidence=IEA] [GO:0050811 "GABA receptor binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 EMBL:CH471069 DrugBank:DB00683
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 CTD:2560
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 OMA:YRKPMSS
OrthoDB:EOG45756F EMBL:X14767 EMBL:M59216 EMBL:M59212 EMBL:M59214
EMBL:M59215 EMBL:AK312720 EMBL:BC022449 EMBL:S70733 IPI:IPI00299122
PIR:A40336 RefSeq:NP_000803.2 UniGene:Hs.27283
ProteinModelPortal:P18505 SMR:P18505 IntAct:P18505 STRING:P18505
PhosphoSite:P18505 DMDM:23831128 PaxDb:P18505 PRIDE:P18505
DNASU:2560 Ensembl:ENST00000295454 GeneID:2560 KEGG:hsa:2560
UCSC:uc003gxh.3 GeneCards:GC04P046949 H-InvDB:HIX0004191
H-InvDB:HIX0164000 HGNC:HGNC:4081 HPA:HPA051297 MIM:137190
neXtProt:NX_P18505 PharmGKB:PA28495 InParanoid:P18505
PhylomeDB:P18505 BindingDB:P18505 ChEMBL:CHEMBL4558 GenomeRNAi:2560
NextBio:10111 ArrayExpress:P18505 Bgee:P18505 CleanEx:HS_GABRB1
Genevestigator:P18505 Uniprot:P18505
Length = 474
Score = 194 (73.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 150 (57.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQSWKDKRLSYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 71 (30.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP+ F+LFN+ YW
Sbjct: 439 KIPDLTDVNSIDKWSRMFFPITFSLFNVVYW 469
>MGI|MGI:95619 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=ISO] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95619 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438 HOGENOM:HOG000231335
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F EMBL:U14418 IPI:IPI00119283
PIR:S53530 RefSeq:NP_032095.1 UniGene:Mm.38567
ProteinModelPortal:P50571 SMR:P50571 STRING:P50571
PhosphoSite:P50571 PaxDb:P50571 PRIDE:P50571
Ensembl:ENSMUST00000031122 GeneID:14400 KEGG:mmu:14400
InParanoid:P50571 BindingDB:P50571 ChEMBL:CHEMBL2839 ChiTaRS:GABRB1
NextBio:285945 Bgee:P50571 Genevestigator:P50571
GermOnline:ENSMUSG00000029212 Uniprot:P50571
Length = 474
Score = 194 (73.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 150 (57.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQSWKDKRLSYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 71 (30.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP+ F+LFN+ YW
Sbjct: 439 KIPDLTDVNSIDKWSRMFFPITFSLFNVVYW 469
>RGD|2649 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor, beta 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=TAS] [GO:0009636 "response to toxic substance" evidence=IDA]
[GO:0015276 "ligand-gated ion channel activity" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0021954 "central nervous
system neuron development" evidence=IEP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0032570
"response to progesterone stimulus" evidence=IEP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042698 "ovulation
cycle" evidence=IEP] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IPI] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 RGD:2649 GO:GO:0005886
GO:GO:0005737 GO:GO:0005635 GO:GO:0016020 GO:GO:0009636 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0015276 GO:GO:0043235 GO:GO:0032570
GO:GO:0042698 GO:GO:0005253 GO:GO:0034707 GO:GO:0005254 GO:GO:0021954
GO:GO:0006821 HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OMA:YRKPMSS OrthoDB:EOG45756F EMBL:X15466 IPI:IPI00209268 PIR:S04464
RefSeq:NP_037088.1 UniGene:Rn.207157 ProteinModelPortal:P15431
SMR:P15431 IntAct:P15431 TCDB:1.A.9.5.1 PhosphoSite:P15431
PRIDE:P15431 Ensembl:ENSRNOT00000003170 GeneID:25450 KEGG:rno:25450
UCSC:RGD:2649 InParanoid:P15431 BindingDB:P15431 ChEMBL:CHEMBL334
NextBio:606697 Genevestigator:P15431 GermOnline:ENSRNOG00000002327
Uniprot:P15431
Length = 474
Score = 194 (73.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W G+ V V + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + + TGAY L + KR Y+++Q Y
Sbjct: 211 FSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTY 251
Score = 150 (57.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y+ G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQSWKDKRLSYS---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 71 (30.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP+ F+LFN+ YW
Sbjct: 439 KIPDLTDVNSIDKWSRMFFPITFSLFNVVYW 469
>UNIPROTKB|E1BJH4 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
CTD:55879 KO:K05192 OMA:FFHQTWK PANTHER:PTHR18945:SF87
EMBL:DAAA02068181 IPI:IPI00727908 RefSeq:NP_001179568.1
UniGene:Bt.106437 ProteinModelPortal:E1BJH4
Ensembl:ENSBTAT00000060999 GeneID:527180 KEGG:bta:527180
NextBio:20874535 Uniprot:E1BJH4
Length = 642
Score = 196 (74.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 41/105 (39%), Positives = 66/105 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWK-EGDPVQVVKNLHLPR 189
Y ++ T +C MNL+ +PLD+Q+C L++ SYG+T DD++ W+ G+ VQ + LH+P+
Sbjct: 173 YGIRLTTTAACSMNLEKFPLDKQTCKLEVESYGYTVDDILLYWEGSGNAVQGTEKLHIPQ 232
Query: 190 FTLEKFYTDYCNSKT---NTGAYSCLKVDLLFKREFSYYLIQIYY 231
F+ F ++K TG+Y L + L KRE + YL+QIY+
Sbjct: 233 FS---FLGKTISTKEVFFYTGSYVRLILRFLVKREVTSYLVQIYW 274
Score = 134 (52.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F + W D RL Y++ + + L ++W+PD +F N KE H+ + N
Sbjct: 103 DYTITMFFHQTWKDPRLAYHETNLNLT-LDYRLFEKLWVPDCYFLNSKEAFVHDATVENR 161
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
++HP G+V Y I L C +++ ++ C
Sbjct: 162 VFQLHPDGTVRYGIR-LTTTAACSMNLEKFPLDKQTC 197
>UNIPROTKB|K7GR83 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
PANTHER:PTHR18945:SF87 EMBL:CU468868 Ensembl:ENSSSCT00000033178
Uniprot:K7GR83
Length = 385
Score = 191 (72.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 40/103 (38%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWK-EGDPVQVVKNLHLPR 189
Y ++ T +C MNL+ +PLD+Q+C L++ SYG+T +D++ W+ G+ +Q + LH+P+
Sbjct: 173 YGIRLTTTAACSMNLQNFPLDKQTCKLEVESYGYTVEDILLYWEGNGNAIQGTEKLHIPQ 232
Query: 190 FT-LEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F+ L K T TG+Y L + L KRE YL+QIY+
Sbjct: 233 FSFLGKTMTSK-EVFFYTGSYVRLILRFLVKREIISYLVQIYW 274
Score = 127 (49.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F + W D RL Y Y+ + LTL ++W+PD +F N K+ H++ +
Sbjct: 103 DYTITMFFHQTWKDPRLAY--YETNLN-LTLDYRMLEKLWVPDCYFLNSKDAFVHDVTVE 159
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N ++ P G+V Y I L C +++ ++ C
Sbjct: 160 NRVFQLQPDGTVRYGIR-LTTTAACSMNLQNFPLDKQTC 197
>UNIPROTKB|F1LP68 [details] [associations]
symbol:Gabre "Gamma-aminobutyric acid receptor subunit
epsilon" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008099 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236
RGD:68320 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GeneTree:ENSGT00540000070314
IPI:IPI01016305 Ensembl:ENSRNOT00000039949 ArrayExpress:F1LP68
Uniprot:F1LP68
Length = 914
Score = 166 (63.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 1 EYSVQLTFREQWLDERLKYND-YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EYS+ + F + W DERL+YND ++ I + + S++W+PD FF N K ++I +PN
Sbjct: 524 EYSIDIIFYQTWYDERLRYNDTFETLILHGNVV--SQLWIPDTFFRNSKRTQEYDITIPN 581
Query: 60 VYIRIHPQGSVLYSISDLDNMRQCEVHM 87
IH G VLY++ + R C +HM
Sbjct: 582 QMALIHKDGKVLYTVRMTIDAR-CSLHM 608
Score = 72 (30.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 111 RIDVISRITFPLVFALFNLTYWSTISLTL 139
R+D SR+ FP+ F FN+ YW I L L
Sbjct: 887 RLDNYSRVLFPITFFFFNVVYW-VICLNL 914
>UNIPROTKB|F1NES7 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00591128 OMA:FYAIYET
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 ProteinModelPortal:F1NES7
Ensembl:ENSGALT00000027029 ArrayExpress:F1NES7 Uniprot:F1NES7
Length = 478
Score = 193 (73.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 40/103 (38%), Positives = 62/103 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ GD V V+ + LP+
Sbjct: 151 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQ 210
Query: 190 FTLEKFYTDYCNSKTNTG--AYSCLKVDLLFKREFSYYLIQIY 230
F++ ++ N TG AY L + KR Y+++Q Y
Sbjct: 211 FSIVEYRLVSKNVVFATGKCAYPRLSLSFRLKRNIGYFILQTY 253
Score = 145 (56.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F++ W D+RL Y G LTL A ++W+PD +F N+K+ H + +
Sbjct: 81 DYTLTMYFQQYWRDKRLAYA---GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 137
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N IR+HP G+VLY + + C + + +NC
Sbjct: 138 NRMIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 175
Score = 72 (30.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 104 KFP--TRSKRIDVISRITFPLVFALFNLTYW 132
K P T ID SR+ FP F+LFNL YW
Sbjct: 443 KIPDLTDVNAIDRWSRMVFPFTFSLFNLIYW 473
>FB|FBgn0010240 [details] [associations]
symbol:Lcch3 "Ligand-gated chloride channel homolog 3"
species:7227 "Drosophila melanogaster" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0004890 "GABA-A receptor activity"
evidence=NAS;IDA] [GO:0016021 "integral to membrane"
evidence=IEA;NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:AE014298 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 KO:K05181 EMBL:L17436
EMBL:S62717 EMBL:AY060660 PIR:JN0603 RefSeq:NP_996469.1
UniGene:Dm.6661 ProteinModelPortal:Q08832 SMR:Q08832 STRING:Q08832
EnsemblMetazoa:FBtr0074129 GeneID:32554 KEGG:dme:Dmel_CG17336
CTD:32554 FlyBase:FBgn0010240 InParanoid:Q08832 OMA:ERSETCS
OrthoDB:EOG444J1S PhylomeDB:Q08832 ChiTaRS:Lcch3 GenomeRNAi:32554
NextBio:779108 Bgee:Q08832 GermOnline:CG17336 Uniprot:Q08832
Length = 496
Score = 193 (73.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 36/102 (35%), Positives = 60/102 (58%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLP 188
+TY + TL+C M+L YPLD Q+C++++ SYG+T D++ WK PV+ V++ LP
Sbjct: 164 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP-TPVRGVEDAELP 222
Query: 189 RFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+FT+ + T+ + TG Y L + +R Y++ Q Y
Sbjct: 223 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTY 264
Score = 124 (48.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 1 EYSVQLTFREQWLDERLKYNDY---------DGRIKYLTLTE--ASRVWMPDLFFSNEKE 49
+Y++ + + W DERL +N + DG LTL+ A ++W+PD FF+N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKN 143
Query: 50 GHFHNIIMPNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
H++ N +R+ G+V Y + + C + + +NC
Sbjct: 144 SFLHDVTERNKLVRLGGDGAVTYGMRFTTTLA-CMMDLHYYPLDSQNC 190
Score = 65 (27.9 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SR+ FP+ F FNL YW
Sbjct: 470 IDKYSRMIFPISFLAFNLGYW 490
Score = 37 (18.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 110 KRIDVISRITFPLVFALF------NLTYW 132
K ID+ + F VFA N TYW
Sbjct: 317 KAIDIYLVMCFVFVFAALLEYAAVNYTYW 345
>UNIPROTKB|E9PSQ4 [details] [associations]
symbol:Gabre "Gamma-aminobutyric acid receptor subunit
epsilon" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008099 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236
RGD:68320 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GeneTree:ENSGT00540000070314
IPI:IPI00212045 Ensembl:ENSRNOT00000022431 ArrayExpress:E9PSQ4
Uniprot:E9PSQ4
Length = 989
Score = 166 (63.5 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 1 EYSVQLTFREQWLDERLKYND-YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPN 59
EYS+ + F + W DERL+YND ++ I + + S++W+PD FF N K ++I +PN
Sbjct: 599 EYSIDIIFYQTWYDERLRYNDTFETLILHGNVV--SQLWIPDTFFRNSKRTQEYDITIPN 656
Query: 60 VYIRIHPQGSVLYSISDLDNMRQCEVHM 87
IH G VLY++ + R C +HM
Sbjct: 657 QMALIHKDGKVLYTVRMTIDAR-CSLHM 683
Score = 72 (30.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 111 RIDVISRITFPLVFALFNLTYWSTISLTL 139
R+D SR+ FP+ F FN+ YW I L L
Sbjct: 962 RLDNYSRVLFPITFFFFNVVYW-VICLNL 989
>WB|WBGene00009790 [details] [associations]
symbol:lgc-44 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253
GO:GO:0016021 GO:GO:0005886 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 KO:K05397 EMBL:Z81085 PIR:T22315
RefSeq:NP_505954.2 ProteinModelPortal:P90876 SMR:P90876
PaxDb:P90876 EnsemblMetazoa:F46F3.2 GeneID:179600
KEGG:cel:CELE_F46F3.2 UCSC:F46F3.2 CTD:179600 WormBase:F46F3.2
eggNOG:NOG309025 HOGENOM:HOG000022498 InParanoid:P90876 OMA:HIANTYI
NextBio:906102 Uniprot:P90876
Length = 618
Score = 141 (54.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 148 YPLDRQSCSLKMASYGWTTDDLIFLW--KEGDPVQVVKNLHLPRFTLEKFYTDYCNSKTN 205
YP D + SLK++S G+T D + W D + + KN+ +P ++ + D CN
Sbjct: 381 YPHDNPAVSLKISSMGFTQDVVKLEWFSDTNDAIWIEKNVKIPELSIRHLHPDTCNGVRK 440
Query: 206 TGAYSCLKVDLLFKREFSYYLIQIY 230
+G YSCL+ RE Y++ Y
Sbjct: 441 SGVYSCLEAKFYMHREVGYHIANTY 465
Score = 107 (42.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y + R W+D RL++ D I T +W PD F+N K FH + N
Sbjct: 293 DYDLDAWVRMSWIDPRLRH-DLSRPILVNDYTFLKMIWRPDPIFTNSKYSTFHKVTYLNF 351
Query: 61 YIRIHPQGSV 70
Y+ I P G +
Sbjct: 352 YLFIFPDGKI 361
Score = 51 (23.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 102 LAKFPTR-SKRIDVISRITFPLVFALFNLTY 131
L+++ R +++ID ++ +P++F LF + Y
Sbjct: 573 LSRYYHRMARQIDTFCKVMYPVIFLLFLMFY 603
>UNIPROTKB|F1S2D2 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 EMBL:CU468868
Ensembl:ENSSSCT00000013945 Uniprot:F1S2D2
Length = 655
Score = 191 (72.3 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 40/103 (38%), Positives = 64/103 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWK-EGDPVQVVKNLHLPR 189
Y ++ T +C MNL+ +PLD+Q+C L++ SYG+T +D++ W+ G+ +Q + LH+P+
Sbjct: 173 YGIRLTTTAACSMNLQNFPLDKQTCKLEVESYGYTVEDILLYWEGNGNAIQGTEKLHIPQ 232
Query: 190 FT-LEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
F+ L K T TG+Y L + L KRE YL+QIY+
Sbjct: 233 FSFLGKTMTSK-EVFFYTGSYVRLILRFLVKREIISYLVQIYW 274
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + F + W D RL Y Y+ + LTL ++W+PD +F N K+ H++ +
Sbjct: 103 DYTITMFFHQTWKDPRLAY--YETNLN-LTLDYRMLEKLWVPDCYFLNSKDAFVHDVTVE 159
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N ++ P G+V Y I L C +++ ++ C
Sbjct: 160 NRVFQLQPDGTVRYGIR-LTTTAACSMNLQNFPLDKQTC 197
>UNIPROTKB|Q75NA5 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7370 "Musca domestica" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISS] [GO:0006836
"neurotransmitter transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISS]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030285
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 GO:GO:0008503 HSSP:P23415
EMBL:AB177547 EMBL:AF070935 ProteinModelPortal:Q75NA5
BindingDB:Q75NA5 ChEMBL:CHEMBL3986 DrugBank:DB00431 Uniprot:Q75NA5
Length = 576
Score = 190 (71.9 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 38/97 (39%), Positives = 57/97 (58%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPRFTLE 193
+++T SCPMNL+ +P+DRQ C +++ S+G+T D+ + W EG + V V + LP+F +
Sbjct: 177 LTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVL 236
Query: 194 KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
TG YS L ++ F R YYLIQIY
Sbjct: 237 GHRQRAVEISLTTGNYSRLACEIQFVRSMGYYLIQIY 273
Score = 143 (55.4 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTL-TE-ASRVWMPDLFFSNEKEGHFHNIIMP 58
++++ FR+ W D RL Y G ++ L++ +E +W+PD FF NEK+ +FH
Sbjct: 101 DFTLDFYFRQFWTDPRLAYRKRPG-VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 159
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N +IR+H GS+ SI L C +++ R+ C
Sbjct: 160 NEFIRVHHSGSITRSIR-LTITASCPMNLQYFPMDRQLC 197
Score = 71 (30.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+ F FNL YW
Sbjct: 535 IDKYSRIVFPVCFVCFNLMYW 555
>UNIPROTKB|E7EV50 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4082 EMBL:AC008712
EMBL:AC022120 EMBL:AC091882 EMBL:AC091989 IPI:IPI00982847
ProteinModelPortal:E7EV50 SMR:E7EV50 Ensembl:ENST00000517901
ArrayExpress:E7EV50 Bgee:E7EV50 Uniprot:E7EV50
Length = 411
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ D V V + LP+
Sbjct: 87 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQ 146
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + +TG+Y L + KR Y+++Q Y
Sbjct: 147 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTY 187
Score = 150 (57.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 17 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 75
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 76 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 111
Score = 72 (30.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+VF+ FN+ YW
Sbjct: 386 IDRWSRIFFPVVFSFFNIVYW 406
>UNIPROTKB|Q9BLY8 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7240 "Drosophila simulans" [GO:0006811 "ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006811 GO:GO:0034707
GO:GO:0005254 OrthoDB:EOG44B8HM EMBL:AY017266
ProteinModelPortal:Q9BLY8 FlyBase:FBgn0012851 Uniprot:Q9BLY8
Length = 606
Score = 190 (71.9 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 38/97 (39%), Positives = 57/97 (58%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPRFTLE 193
+++T SCPMNL+ +P+DRQ C +++ S+G+T D+ + W EG + V V + LP+F +
Sbjct: 179 LTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVL 238
Query: 194 KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
TG YS L ++ F R YYLIQIY
Sbjct: 239 GHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIY 275
Score = 143 (55.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTL-TE-ASRVWMPDLFFSNEKEGHFHNIIMP 58
++++ FR+ W D RL Y G ++ L++ +E +W+PD FF NEK+ +FH
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPG-VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 161
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N +IR+H GS+ SI L C +++ R+ C
Sbjct: 162 NEFIRVHHSGSITRSIR-LTITASCPMNLQYFPMDRQLC 199
Score = 71 (30.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+ F FNL YW
Sbjct: 566 IDKYSRIVFPVCFVCFNLMYW 586
Score = 42 (19.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFK 219
H P+ T+ + N + N G C V LF+
Sbjct: 442 HAPKQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQ 475
>WB|WBGene00001512 [details] [associations]
symbol:gab-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0004890 "GABA-A
receptor activity" evidence=IEA;IDA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA;IDA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=ISS] [GO:0045202 "synapse" evidence=IC] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0045202
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
EMBL:AF498370 EMBL:Z93397 PIR:T27614 RefSeq:NP_499661.2 HSSP:P23415
ProteinModelPortal:O18276 SMR:O18276 PaxDb:O18276
EnsemblMetazoa:ZC482.1 GeneID:176691 KEGG:cel:CELE_ZC482.1
UCSC:ZC482.1 CTD:176691 WormBase:ZC482.1 InParanoid:O18276
OMA:HEVTERN NextBio:893616 Uniprot:O18276
Length = 550
Score = 189 (71.6 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 46/144 (31%), Positives = 76/144 (52%)
Query: 89 VPQTPRKNCCRSWLAKFPTRSK--RIDVISRITFPLVFALFNLTYWSTISLTLSCPMNLK 146
VP T N S+L + R+K RI+V ++ Y ++ TLSC MNL+
Sbjct: 137 VPDTFLANDKHSYLHEVTERNKMLRINVDGKVA-----------YGMRLTSTLSCSMNLR 185
Query: 147 LYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEKFYTDYCNSKTNT 206
+PLD Q+C++++ SYG+TT +++ W V V+ +P+FT+ F+T+ T T
Sbjct: 186 NFPLDSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTAT 245
Query: 207 GAYSCLKVDLLFKREFSYYLIQIY 230
G+Y L + +R Y++ Q Y
Sbjct: 246 GSYQRLSLVFQLRRSVGYFIFQTY 269
Score = 130 (50.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLT-EASR-VWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + + W DERL++++ + I +TL+ E S+ +W+PD F +N+K + H +
Sbjct: 98 DYTLTMYLHQYWTDERLRWSN-EIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTER 156
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N +RI+ G V Y + L + C +++ +NC
Sbjct: 157 NKMLRINVDGKVAYGMR-LTSTLSCSMNLRNFPLDSQNC 194
Score = 74 (31.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
ID SR+ FP+ F +FNL YWS
Sbjct: 522 IDKYSRVVFPVCFIVFNLFYWS 543
>UNIPROTKB|E1C890 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:2001023 "regulation of response to drug"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 CTD:2557 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:2001023 OMA:KEPAIAM
EMBL:AADN02031278 IPI:IPI00602335 RefSeq:XP_420724.2
ProteinModelPortal:E1C890 Ensembl:ENSGALT00000022968 GeneID:422770
KEGG:gga:422770 NextBio:20825357 Uniprot:E1C890
Length = 554
Score = 162 (62.1 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLKY DG I+ L L S+VW PD FF N K+ HN+ P
Sbjct: 91 EYTMDVFFRQTWVDKRLKY---DGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAP 147
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N RI G++LY++ L +C + +
Sbjct: 148 NKLFRIMRNGTILYTMR-LTISAECPMRL 175
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + V +T P +F + N T T+ LT+S CPM L +P+D +C LK SY
Sbjct: 134 RNGKKSVAHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYA 193
Query: 164 WTTDDLIFLWKEGDP--VQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ W +G V+V + + L ++ L K+ TG Y + V +R
Sbjct: 194 YPKSEMIYTWTKGPEKSVEVPEESSSLVQYDLLGHTVSSETIKSITGEYIVMTVYFHLRR 253
Query: 221 EFSYYLIQIY 230
+ Y++IQ Y
Sbjct: 254 KMGYFMIQTY 263
Score = 70 (29.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID +RI FP+ F FN+ YW
Sbjct: 515 TSKIDKYARILFPVTFGAFNMVYW 538
>UNIPROTKB|P0C2W5 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 IPI:IPI00823907 UniGene:Bt.63930
ProteinModelPortal:P0C2W5 SMR:P0C2W5 STRING:P0C2W5 Uniprot:P0C2W5
Length = 472
Score = 187 (70.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ D V V + LP+
Sbjct: 148 YGLRITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQ 207
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + +TG+Y L + KR Y+++Q Y
Sbjct: 208 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTY 248
Score = 150 (57.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 78 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 136
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 137 MIRLHPDGTVLYGLR-ITTTTACMMDLRRYPLDEQNC 172
Score = 72 (30.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+VF+ FN+ YW
Sbjct: 447 IDRWSRIFFPVVFSFFNIVYW 467
>UNIPROTKB|L7N0C0 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
GeneTree:ENSGT00630000089685 EMBL:AAEX03003043
Ensembl:ENSCAFT00000015972 Uniprot:L7N0C0
Length = 474
Score = 187 (70.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ D V V + LP+
Sbjct: 150 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQ 209
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + +TG+Y L + KR Y+++Q Y
Sbjct: 210 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTY 250
Score = 150 (57.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 139 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 174
Score = 72 (30.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+VF+ FN+ YW
Sbjct: 449 IDRWSRIFFPVVFSFFNIVYW 469
>RGD|2650 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor, beta 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IMP;TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=IMP] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=TAS] [GO:0007605
"sensory perception of sound" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=ISO] [GO:0051932 "synaptic transmission,
GABAergic" evidence=IDA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA;ISO] [GO:0060384 "innervation"
evidence=IEA;ISO] [GO:0090102 "cochlea development" evidence=IEA;ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2650 GO:GO:0005829 GO:GO:0005886 GO:GO:0016020
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 GO:GO:0090102
GO:GO:0051932 GO:GO:0060119 HOVERGEN:HBG051707 GO:GO:0005237
GO:GO:0060384 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 KO:K05181 OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR
EMBL:X15467 EMBL:AY574251 IPI:IPI00209269 PIR:S04465
RefSeq:NP_037089.1 UniGene:Rn.207158 ProteinModelPortal:P63138
SMR:P63138 IntAct:P63138 STRING:P63138 PhosphoSite:P63138
PRIDE:P63138 Ensembl:ENSRNOT00000004970 GeneID:25451 KEGG:rno:25451
UCSC:RGD:2650 InParanoid:P63138 BindingDB:P63138 ChEMBL:CHEMBL295
NextBio:606701 Genevestigator:P63138 GermOnline:ENSRNOG00000003680
Uniprot:P63138
Length = 474
Score = 187 (70.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ D V V + LP+
Sbjct: 150 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQ 209
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + +TG+Y L + KR Y+++Q Y
Sbjct: 210 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTY 250
Score = 150 (57.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 139 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 174
Score = 72 (30.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+VF+ FN+ YW
Sbjct: 449 IDRWSRIFFPVVFSFFNIVYW 469
>ZFIN|ZDB-GENE-060825-164 [details] [associations]
symbol:gabrr2a "gamma-aminobutyric acid (GABA) A
receptor, rho 2a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
ZFIN:ZDB-GENE-060825-164 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:CR759878
IPI:IPI00920044 ProteinModelPortal:F1QX34
Ensembl:ENSDART00000130881 Bgee:F1QX34 Uniprot:F1QX34
Length = 475
Score = 187 (70.9 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 40/137 (29%), Positives = 77/137 (56%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR + T ++ +F ++ Y +++T +C M+ +PLD Q+CS
Sbjct: 139 WVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCS 198
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD + + + + L +F ++KF+T ++TG Y+ L +
Sbjct: 199 LELESYAYTDEDLMLYWKNGDESLSIDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 258
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 259 NFTLRRHIFFFLLQTYF 275
Score = 130 (50.8 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 102 DFTMTLYLRHYWKDERLSFTSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENI 161
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 162 MLRVFPDGHVLYSL 175
Score = 66 (28.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
ID SR+ FP + +FNL YWS
Sbjct: 451 IDKYSRMIFPGAYIIFNLIYWS 472
>UNIPROTKB|P47870 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] [GO:0005237 "inhibitory extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0006810
"transport" evidence=TAS] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] [GO:0051932 "synaptic
transmission, GABAergic" evidence=ISS] [GO:0004890 "GABA-A receptor
activity" evidence=ISS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005829 GO:GO:0005887
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
GO:GO:0090102 GO:GO:0051932 DrugBank:DB00683 GO:GO:0060119
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 GO:GO:0005237
TCDB:1.A.9.5.2 GO:GO:0060384 eggNOG:NOG77438 KO:K05181
OrthoDB:EOG45756F EMBL:S67368 EMBL:S77554 EMBL:S77553 EMBL:GU086163
EMBL:GU086164 EMBL:AK289730 EMBL:AK289815 EMBL:BC099705
EMBL:BC099719 EMBL:BC105639 IPI:IPI00026639 IPI:IPI00216394
IPI:IPI00954901 IPI:IPI00955985 PIR:I52656 RefSeq:NP_000804.1
RefSeq:NP_068711.1 UniGene:Hs.303527 ProteinModelPortal:P47870
SMR:P47870 MINT:MINT-268409 STRING:P47870 PhosphoSite:P47870
DMDM:292495010 PaxDb:P47870 PeptideAtlas:P47870 PRIDE:P47870
Ensembl:ENST00000274547 Ensembl:ENST00000353437
Ensembl:ENST00000393959 Ensembl:ENST00000520240 GeneID:2561
KEGG:hsa:2561 UCSC:uc003lyr.1 UCSC:uc003lys.1 UCSC:uc021yhg.1
CTD:2561 GeneCards:GC05M160715 HGNC:HGNC:4082 HPA:CAB001964
MIM:600232 neXtProt:NX_P47870 PharmGKB:PA28496 OMA:TSSIQYR
PhylomeDB:P47870 BindingDB:P47870 ChEMBL:CHEMBL1920 GenomeRNAi:2561
NextBio:10115 ArrayExpress:P47870 Bgee:P47870 CleanEx:HS_GABRB2
Genevestigator:P47870 GermOnline:ENSG00000145864 Uniprot:P47870
Length = 512
Score = 187 (70.9 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ D V V + LP+
Sbjct: 150 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQ 209
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + +TG+Y L + KR Y+++Q Y
Sbjct: 210 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTY 250
Score = 150 (57.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 139 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 174
Score = 72 (30.4 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+VF+ FN+ YW
Sbjct: 487 IDRWSRIFFPVVFSFFNIVYW 507
>MGI|MGI:95620 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IMP] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060119 "inner ear receptor cell
development" evidence=IMP] [GO:0060384 "innervation" evidence=IMP]
[GO:0090102 "cochlea development" evidence=IMP] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
MGI:MGI:95620 GO:GO:0005829 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0005237 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR EMBL:U14419 EMBL:GU086167
EMBL:AK090279 EMBL:AL627444 EMBL:AL645964 EMBL:CH466609
EMBL:BC145973 EMBL:BC145975 IPI:IPI00323554 IPI:IPI00955696
PIR:S53531 RefSeq:NP_032096.1 UniGene:Mm.338723 UniGene:Mm.471870
ProteinModelPortal:P63137 SMR:P63137 STRING:P63137
PhosphoSite:P63137 PRIDE:P63137 Ensembl:ENSMUST00000007797
GeneID:14401 KEGG:mmu:14401 UCSC:uc007imi.1 InParanoid:A6H6R7
ChEMBL:CHEMBL4545 NextBio:285949 Bgee:P63137 Genevestigator:P63137
GermOnline:ENSMUSG00000007653 Uniprot:P63137
Length = 512
Score = 187 (70.9 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ D V V + LP+
Sbjct: 150 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQ 209
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + +TG+Y L + KR Y+++Q Y
Sbjct: 210 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTY 250
Score = 150 (57.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 139 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 174
Score = 72 (30.4 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+VF+ FN+ YW
Sbjct: 487 IDRWSRIFFPVVFSFFNIVYW 507
>UNIPROTKB|E1BFC0 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0090102 "cochlea development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605 GO:GO:0090102
GO:GO:0060119 GO:GO:0060384 GeneTree:ENSGT00630000089685
OMA:TSSIQYR EMBL:DAAA02020899 EMBL:DAAA02020900 EMBL:DAAA02020901
EMBL:DAAA02020902 EMBL:DAAA02020903 EMBL:DAAA02020904
EMBL:DAAA02020905 IPI:IPI01001787 ProteinModelPortal:E1BFC0
Ensembl:ENSBTAT00000024736 BindingDB:E1BFC0 Uniprot:E1BFC0
Length = 519
Score = 187 (70.9 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPR 189
Y I+ T +C M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ D V V + LP+
Sbjct: 157 YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQ 216
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
F++ + +TG+Y L + KR Y+++Q Y
Sbjct: 217 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTY 257
Score = 150 (57.9 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F++ W D+RL YN + L A ++W+PD +F N+K+ H + + N
Sbjct: 87 DYTLTMYFQQAWRDKRLSYNVIPLNLT-LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 145
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+HP G+VLY + + C + + +NC
Sbjct: 146 MIRLHPDGTVLYGLR-ITTTAACMMDLRRYPLDEQNC 181
Score = 72 (30.4 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+VF+ FN+ YW
Sbjct: 494 IDRWSRIFFPVVFSFFNIVYW 514
>ZFIN|ZDB-GENE-081028-62 [details] [associations]
symbol:gabrp "gamma-aminobutyric acid (GABA) A
receptor, pi" species:7955 "Danio rerio" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236
ZFIN:ZDB-GENE-081028-62 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:BX248097 IPI:IPI00495215
ProteinModelPortal:F1Q6Y8 Ensembl:ENSDART00000074819 Uniprot:F1Q6Y8
Length = 464
Score = 186 (70.5 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 33/109 (30%), Positives = 64/109 (58%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQV 181
+F+ + Y I+ T++C M+L YP+DRQ C+L++ S+G+ +D++F W G D V+
Sbjct: 159 IFSNGTVLYALRITATIACNMDLTKYPMDRQECTLQLESWGYNLEDVVFYWTRGNDSVKG 218
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ L L ++++E +YT + TG Y L + +R +++++ Y
Sbjct: 219 LDTLRLAQYSVESYYTSVTKAVYETGLYPKLILHFALRRNVLFFILETY 267
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 31/109 (28%), Positives = 52/109 (47%)
Query: 1 EYSVQLTFREQWLDERLKY--ND---YDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNI 55
+Y+ + R++W D RL + N+ DGR+ S +W+PD F + K H++
Sbjct: 98 DYTATIFLRQRWRDSRLIFPGNESLSLDGRL-------VSLLWIPDTFIPDSKRSFLHDV 150
Query: 56 IMPNVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCC---RSW 101
+ N IRI G+VLY++ + C + +T R+ C SW
Sbjct: 151 TVENRLIRIFSNGTVLYALRITATIA-CNMDLTKYPMDRQECTLQLESW 198
>UNIPROTKB|F1P9P9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:THANLNM
EMBL:AAEX03009036 Ensembl:ENSCAFT00000037915 Uniprot:F1P9P9
Length = 465
Score = 160 (61.4 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLKY DG I+ L L ++VW PD FF N K+ HN+ P
Sbjct: 2 EYTMDVFFRQTWIDKRLKY---DGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAP 58
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N RI G++LY++ L +C + +
Sbjct: 59 NKLFRIMRNGTILYTMR-LTISAECPMRL 86
Score = 137 (53.3 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + V +T P +F + N T T+ LT+S CPM L +P+D +C LK SY
Sbjct: 45 RNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYA 104
Query: 164 WTTDDLIFLWKEGDP--VQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ W +G V+V K + L ++ L K+ TG Y + V +R
Sbjct: 105 YPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLVGQTVSSETIKSITGEYIVMTVYFHLRR 164
Query: 221 EFSYYLIQIY 230
+ Y++IQ Y
Sbjct: 165 KMGYFMIQTY 174
Score = 70 (29.7 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID +RI FP+ F FN+ YW
Sbjct: 426 TSKIDKYARILFPVTFGAFNMVYW 449
>FB|FBgn0004244 [details] [associations]
symbol:Rdl "Resistant to dieldrin" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0046682 "response to cyclodiene" evidence=NAS] [GO:0004890
"GABA-A receptor activity" evidence=IEA;NAS;TAS] [GO:0016021
"integral to membrane" evidence=IEA;NAS] [GO:0050805 "negative
regulation of synaptic transmission" evidence=IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0009612 "response to mechanical
stimulus" evidence=IGI] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0090328 "regulation of
olfactory learning" evidence=IMP] [GO:0030431 "sleep" evidence=IMP]
[GO:0042749 "regulation of circadian sleep/wake cycle"
evidence=IMP] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 EMBL:AE014296 GO:GO:0009612 GO:GO:0030431
GO:GO:0030594 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0006811
GO:GO:0030425 GO:GO:0050805 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 EMBL:M69057 EMBL:U02042 EMBL:AY051418
EMBL:S61113 PIR:A41145 RefSeq:NP_523991.2 RefSeq:NP_729461.1
RefSeq:NP_729462.2 ProteinModelPortal:P25123 SMR:P25123
STRING:P25123 PaxDb:P25123 EnsemblMetazoa:FBtr0076536 GeneID:39054
KEGG:dme:Dmel_CG10537 CTD:39054 FlyBase:FBgn0004244
eggNOG:NOG265706 InParanoid:P25123 KO:K05195 OMA:GGMFGDV
OrthoDB:EOG44B8HM PhylomeDB:P25123 ChiTaRS:Rdl GenomeRNAi:39054
NextBio:811688 Bgee:P25123 GermOnline:CG10537 GO:GO:0042749
GO:GO:0090328 Uniprot:P25123
Length = 606
Score = 188 (71.2 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 36/97 (37%), Positives = 57/97 (58%)
Query: 135 ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPRFTLE 193
+++T SCPMNL+ +P+DRQ C +++ S+G+T D+ + W++G V + + LP+F +
Sbjct: 179 LTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVL 238
Query: 194 KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
TG YS L ++ F R YYLIQIY
Sbjct: 239 GHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIY 275
Score = 143 (55.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTL-TE-ASRVWMPDLFFSNEKEGHFHNIIMP 58
++++ FR+ W D RL Y G ++ L++ +E +W+PD FF NEK+ +FH
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPG-VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 161
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N +IR+H GS+ SI L C +++ R+ C
Sbjct: 162 NEFIRVHHSGSITRSIR-LTITASCPMNLQYFPMDRQLC 199
Score = 71 (30.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FP+ F FNL YW
Sbjct: 566 IDKYSRIVFPVCFVCFNLMYW 586
Score = 42 (19.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 186 HLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFK 219
H P+ T+ + N + N G C V LF+
Sbjct: 442 HAPKQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQ 475
>FB|FBgn0037950 [details] [associations]
symbol:HisCl1 "Histamine-gated chloride channel subunit 1"
species:7227 "Drosophila melanogaster" [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=ISS]
[GO:0019182 "histamine-gated chloride channel activity"
evidence=NAS] [GO:0019183 "histamine-gated chloride channel
complex" evidence=NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0043052 "thermotaxis"
evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0043052 HSSP:P23415
InterPro:IPR015680 PANTHER:PTHR18945:SF26 FlyBase:FBgn0037950
EMBL:AF467953 ProteinModelPortal:Q8T9R9 SMR:Q8T9R9 STRING:Q8T9R9
PRIDE:Q8T9R9 InParanoid:Q8T9R9 OrthoDB:EOG41G1KM
ArrayExpress:Q8T9R9 Bgee:Q8T9R9 Uniprot:Q8T9R9
Length = 426
Score = 184 (69.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLP 188
L Y S ++L L C + + YP D Q CS+ + S T +DL+F+W DP+ V + LP
Sbjct: 170 LFYMSKLTLVLWCALKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELP 229
Query: 189 RFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ + YT C + +TG ++CL + +R Y+L Y
Sbjct: 230 QLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTY 271
>UNIPROTKB|F1MBQ3 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008057 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
IPI:IPI00694785 EMBL:DAAA02026443 Ensembl:ENSBTAT00000024526
Uniprot:F1MBQ3
Length = 392
Score = 183 (69.5 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR + T ++ +F + Y I++T C M+ +PLD Q+CS
Sbjct: 61 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCS 120
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 121 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 180
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 181 NFTLRRHIFFFLLQTYF 197
Score = 128 (50.1 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 24 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 83
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 84 MLRVFPDGQVLYSM 97
Score = 67 (28.6 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + FNL YWS +
Sbjct: 368 IDKYSRLIFPASYIFFNLIYWSVFA 392
>UNIPROTKB|F1NWI6 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GeneTree:ENSGT00630000089571
EMBL:AADN02002377 IPI:IPI00680961 Ensembl:ENSGALT00000031682
Uniprot:F1NWI6
Length = 298
Score = 179 (68.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/132 (29%), Positives = 73/132 (55%)
Query: 105 FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMAS 161
F SKR + T ++ +F ++ Y I++T C M+ +PLD Q+CSL++ S
Sbjct: 1 FFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSRFPLDSQTCSLELES 60
Query: 162 YGWTTDDLIFLWKEG-DPVQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKVDLLFK 219
Y +T +DL+ WK G + ++ + + L +F ++KF+T ++TG Y+ L + +
Sbjct: 61 YAYTDEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYISFTLR 120
Query: 220 REFSYYLIQIYY 231
R ++L+Q Y+
Sbjct: 121 RHIFFFLLQTYF 132
>UNIPROTKB|G5E635 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0007601 "visual perception"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:DAAA02026443
Ensembl:ENSBTAT00000050515 Uniprot:G5E635
Length = 412
Score = 183 (69.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR + T ++ +F + Y I++T C M+ +PLD Q+CS
Sbjct: 61 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCS 120
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 121 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 180
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 181 NFTLRRHIFFFLLQTYF 197
Score = 128 (50.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 24 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 83
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 84 MLRVFPDGQVLYSM 97
Score = 67 (28.6 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + FNL YWS +
Sbjct: 388 IDKYSRLIFPASYIFFNLIYWSVFA 412
>MGI|MGI:95626 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=TAS] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IMP] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
MGI:MGI:95626 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0007601 EMBL:CH466538 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 OMA:GFRIFQN EMBL:AF024621 EMBL:BC057957
IPI:IPI00113786 RefSeq:NP_032102.2 UniGene:Mm.6227
ProteinModelPortal:P56476 STRING:P56476 PhosphoSite:P56476
PRIDE:P56476 Ensembl:ENSMUST00000024035 Ensembl:ENSMUST00000108162
GeneID:14409 KEGG:mmu:14409 InParanoid:Q6PEP0 ChEMBL:CHEMBL2220
NextBio:285985 Bgee:P56476 Genevestigator:P56476
GermOnline:ENSMUSG00000023267 Uniprot:P56476
Length = 465
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 41/137 (29%), Positives = 76/137 (55%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR + T ++ +F ++ Y I++T C M+ +PLD Q+CS
Sbjct: 134 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCS 193
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 194 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 253
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 254 NFTLRRHIFFFLLQTYF 270
Score = 127 (49.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 97 DFTMTLYLRHYWRDERLAFPSSSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 156
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 157 MLRVFPDGHVLYSM 170
Score = 72 (30.4 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + +FNL YWS S
Sbjct: 441 IDKYSRLIFPAFYIVFNLIYWSVFS 465
>MGI|MGI:95616 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 4" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:2001023 "regulation of response to
drug" evidence=IMP] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 MGI:MGI:95616 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417 GO:GO:0034707
GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:THANLNM OrthoDB:EOG4MPHQ4 GO:GO:2001023
EMBL:AK013727 IPI:IPI00109065 RefSeq:NP_034381.1 UniGene:Mm.248731
ProteinModelPortal:Q9D6F4 SMR:Q9D6F4 STRING:Q9D6F4
PhosphoSite:Q9D6F4 PRIDE:Q9D6F4 Ensembl:ENSMUST00000031121
GeneID:14397 KEGG:mmu:14397 InParanoid:Q9D6F4 BindingDB:Q9D6F4
ChEMBL:CHEMBL4182 NextBio:285935 Bgee:Q9D6F4 Genevestigator:Q9D6F4
Uniprot:Q9D6F4
Length = 552
Score = 160 (61.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLKY DG I+ L L ++VW PD FF N K+ HN+ P
Sbjct: 92 EYTMDVFFRQTWIDKRLKY---DGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAP 148
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N RI G++LY++ L +C + +
Sbjct: 149 NKLFRIMRNGTILYTMR-LTISAECPMRL 176
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + V +T P +F + N T T+ LT+S CPM L +P+D +C LK SY
Sbjct: 135 RNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYA 194
Query: 164 WTTDDLIFLWKEGDP--VQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ W +G V+V K + L ++ L K+ TG Y + V +R
Sbjct: 195 YPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRR 254
Query: 221 EFSYYLIQIY 230
+ Y++IQ Y
Sbjct: 255 KMGYFMIQTY 264
Score = 70 (29.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID +RI FP+ F FN+ YW
Sbjct: 513 TSKIDKYARILFPVTFGAFNMVYW 536
>RGD|621670 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor, alpha
4" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA;ISO]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 160 (61.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLKY DG I+ L L ++VW PD FF N K+ HN+ P
Sbjct: 92 EYTMDVFFRQTWIDKRLKY---DGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAP 148
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N RI G++LY++ L +C + +
Sbjct: 149 NKLFRIMRNGTILYTMR-LTISAECPMRL 176
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + V +T P +F + N T T+ LT+S CPM L +P+D +C LK SY
Sbjct: 135 RNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYA 194
Query: 164 WTTDDLIFLWKEGDP--VQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ W +G V+V K + L ++ L K+ TG Y + V +R
Sbjct: 195 YPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRR 254
Query: 221 EFSYYLIQIY 230
+ Y++IQ Y
Sbjct: 255 KMGYFMIQTY 264
Score = 70 (29.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID +RI FP+ F FN+ YW
Sbjct: 513 TSKIDKYARILFPVTFGAFNMVYW 536
>UNIPROTKB|P28471 [details] [associations]
symbol:Gabra4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 160 (61.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLKY DG I+ L L ++VW PD FF N K+ HN+ P
Sbjct: 92 EYTMDVFFRQTWIDKRLKY---DGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAP 148
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N RI G++LY++ L +C + +
Sbjct: 149 NKLFRIMRNGTILYTMR-LTISAECPMRL 176
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + V +T P +F + N T T+ LT+S CPM L +P+D +C LK SY
Sbjct: 135 RNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYA 194
Query: 164 WTTDDLIFLWKEGDP--VQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ W +G V+V K + L ++ L K+ TG Y + V +R
Sbjct: 195 YPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRR 254
Query: 221 EFSYYLIQIY 230
+ Y++IQ Y
Sbjct: 255 KMGYFMIQTY 264
Score = 70 (29.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID +RI FP+ F FN+ YW
Sbjct: 513 TSKIDKYARILFPVTFGAFNMVYW 536
>UNIPROTKB|P48169 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:2001023
"regulation of response to drug" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007417 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
EMBL:CH471069 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
CTD:2557 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 OMA:THANLNM OrthoDB:EOG4MPHQ4
GO:GO:2001023 EMBL:U30461 EMBL:AK090780 EMBL:AC107383 EMBL:BC035055
EMBL:U20166 IPI:IPI00008225 PIR:G01928 RefSeq:NP_000800.2
RefSeq:NP_001191195.1 RefSeq:NP_001191196.1 UniGene:Hs.248112
ProteinModelPortal:P48169 SMR:P48169 IntAct:P48169 STRING:P48169
PhosphoSite:P48169 DMDM:206729865 PRIDE:P48169 DNASU:2557
Ensembl:ENST00000264318 GeneID:2557 KEGG:hsa:2557 UCSC:uc003gxg.3
GeneCards:GC04M046836 HGNC:HGNC:4078 MIM:137141 neXtProt:NX_P48169
PharmGKB:PA28492 InParanoid:P48169 PhylomeDB:P48169
BindingDB:P48169 ChEMBL:CHEMBL2472 GenomeRNAi:2557 NextBio:10099
ArrayExpress:P48169 Bgee:P48169 CleanEx:HS_GABRA4
Genevestigator:P48169 GermOnline:ENSG00000109158 Uniprot:P48169
Length = 554
Score = 160 (61.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLKY DG I+ L L ++VW PD FF N K+ HN+ P
Sbjct: 92 EYTMDVFFRQTWIDKRLKY---DGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAP 148
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N RI G++LY++ L +C + +
Sbjct: 149 NKLFRIMRNGTILYTMR-LTISAECPMRL 176
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + V +T P +F + N T T+ LT+S CPM L +P+D +C LK SY
Sbjct: 135 RNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYA 194
Query: 164 WTTDDLIFLWKEGDP--VQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ W +G V+V K + L ++ L K+ TG Y + V +R
Sbjct: 195 YPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRR 254
Query: 221 EFSYYLIQIY 230
+ Y++IQ Y
Sbjct: 255 KMGYFMIQTY 264
Score = 70 (29.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID +RI FP+ F FN+ YW
Sbjct: 515 TSKIDKYARILFPVTFGAFNMVYW 538
>UNIPROTKB|I3LIV9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007417 GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441
GO:GO:2001023 EMBL:CU467563 RefSeq:XP_003356954.1
Ensembl:ENSSSCT00000031430 GeneID:100622712 KEGG:ssc:100622712
OMA:KEPAIAM Uniprot:I3LIV9
Length = 554
Score = 160 (61.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLKY DG I+ L L ++VW PD FF N K+ HN+ P
Sbjct: 92 EYTMDVFFRQTWIDKRLKY---DGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAP 148
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N RI G++LY++ L +C + +
Sbjct: 149 NKLFRIMRNGTILYTMR-LTISAECPMRL 176
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + V +T P +F + N T T+ LT+S CPM L +P+D +C LK SY
Sbjct: 135 RNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYA 194
Query: 164 WTTDDLIFLWKEGDP--VQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ W +G V+V K + L ++ L K+ TG Y + V +R
Sbjct: 195 YPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRR 254
Query: 221 EFSYYLIQIY 230
+ Y++IQ Y
Sbjct: 255 KMGYFMIQTY 264
Score = 70 (29.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID +RI FP+ F FN+ YW
Sbjct: 515 TSKIDKYARILFPVTFGAFNMVYW 538
>UNIPROTKB|P20237 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9913 "Bos taurus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005434 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417
GO:GO:0034707 GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X61456 EMBL:BC123424 IPI:IPI00689982
PIR:S06838 RefSeq:NP_776968.1 UniGene:Bt.171
ProteinModelPortal:P20237 SMR:P20237 PRIDE:P20237
Ensembl:ENSBTAT00000022141 GeneID:282238 KEGG:bta:282238
InParanoid:P20237 OMA:THANLNM OrthoDB:EOG4MPHQ4 BindingDB:P20237
ChEMBL:CHEMBL3140 NextBio:20806057 GO:GO:2001023 Uniprot:P20237
Length = 555
Score = 160 (61.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLKY DG I+ L L ++VW PD FF N K+ HN+ P
Sbjct: 92 EYTMDVFFRQTWIDKRLKY---DGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAP 148
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHM 87
N RI G++LY++ L +C + +
Sbjct: 149 NKLFRIMRNGTILYTMR-LTISAECPMRL 176
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + V +T P +F + N T T+ LT+S CPM L +P+D +C LK SY
Sbjct: 135 RNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYA 194
Query: 164 WTTDDLIFLWKEGDP--VQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ W +G V+V K + L ++ L K+ TG Y + V +R
Sbjct: 195 YPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRR 254
Query: 221 EFSYYLIQIY 230
+ Y++IQ Y
Sbjct: 255 KMGYFMIQTY 264
Score = 70 (29.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID +RI FP+ F FN+ YW
Sbjct: 516 TSKIDKYARILFPVTFGAFNMVYW 539
>UNIPROTKB|E2R4R7 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AAEX03008512 EMBL:AAEX03008511 Ensembl:ENSCAFT00000004969
OMA:RWTGTVE Uniprot:E2R4R7
Length = 364
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR T ++ +F ++ Y I++T C M+ +PLD Q+CS
Sbjct: 39 WVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCS 98
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 99 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 158
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 159 NFTLRRHIFFFLLQTYF 175
Score = 125 (49.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 2 DFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 61
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 62 MLRVFPDGHVLYSM 75
Score = 83 (34.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 92 TPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYWSTIS 136
+P++ RS + ID SRI FP + LFNL YWS S
Sbjct: 320 SPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 364
>UNIPROTKB|Q0II76 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:BC122770
IPI:IPI00694785 RefSeq:NP_001071414.2 UniGene:Bt.74488
GeneID:522099 KEGG:bta:522099 CTD:2570 InParanoid:Q0II76
NextBio:20873445 Uniprot:Q0II76
Length = 465
Score = 183 (69.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR + T ++ +F + Y I++T C M+ +PLD Q+CS
Sbjct: 134 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCS 193
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 194 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 253
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 254 NFTLRRHIFFFLLQTYF 270
Score = 128 (50.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 156
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 157 MLRVFPDGQVLYSM 170
Score = 67 (28.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + FNL YWS +
Sbjct: 441 IDKYSRLIFPASYIFFNLIYWSVFA 465
>WB|WBGene00017399 [details] [associations]
symbol:lgc-51 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 InterPro:IPR001610 GO:GO:0016021
GO:GO:0005886 GO:GO:0007165 GO:GO:0006355 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 SMART:SM00086
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:FO081123
RefSeq:NP_490946.3 UniGene:Cel.20343 ProteinModelPortal:O01792
SMR:O01792 EnsemblMetazoa:F12B6.3 GeneID:184377
KEGG:cel:CELE_F12B6.3 UCSC:F12B6.3 CTD:184377 WormBase:F12B6.3
eggNOG:NOG263463 InParanoid:O01792 OMA:LFISWIA NextBio:924526
Uniprot:O01792
Length = 469
Score = 140 (54.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 122 LVFALFNLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPV 179
L+ L N T W + + C M+L +P+D Q C L SY + T + W +PV
Sbjct: 134 LLMLLPNGTIWLNYRIRVQSPCSMDLARFPIDTQYCQLVFESYSYNTASVSVNWM-ANPV 192
Query: 180 QVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
V+ + L F L ++ T G + L V+ F R++ +Y++Q+ Y
Sbjct: 193 TVLPEISLADFDLSRYRTSRHTEVYKAGEWYRLTVEFEFTRKYGFYILQVLY 244
Score = 96 (38.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 2 YSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASR--VWMPDLFFSNEKEGHFHNIIMPN 59
++ + F W D RL Y+ D + L+ + +W P++ N K H H PN
Sbjct: 73 FTADIWFSSIWYDPRLAYSHLDNCRQNLSFDDRFEKLIWSPNVCIVNTKSAHVHRSPKPN 132
Query: 60 VYIRIHPQGSV 70
V + + P G++
Sbjct: 133 VLLMLLPNGTI 143
>UNIPROTKB|I3LKA9 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007601 GeneTree:ENSGT00630000089571 OMA:GFRIFQN
EMBL:CU075926 Ensembl:ENSSSCT00000028234 Uniprot:I3LKA9
Length = 488
Score = 183 (69.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR + T ++ +F + Y I++T C M+ +PLD Q+CS
Sbjct: 157 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCS 216
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 217 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 276
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 277 NFTLRRHIFFFLLQTYF 293
Score = 128 (50.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 120 DFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 179
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 180 MLRVFPDGQVLYSM 193
Score = 67 (28.6 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + FNL YWS +
Sbjct: 464 IDKYSRLIFPASYIFFNLIYWSVFA 488
>UNIPROTKB|F6XRX3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 Ensembl:ENSCAFT00000030427
EMBL:AAEX03027062 Uniprot:F6XRX3
Length = 643
Score = 184 (69.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 37/105 (35%), Positives = 66/105 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWK-EGDPVQVVKNLHLPR 189
Y ++ T +C ++L+ +PLD+Q+C L++ SYG+T +D++ W+ G+ +Q + LH+P+
Sbjct: 173 YGMRLTTTAACSLDLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAIQGTEKLHIPQ 232
Query: 190 FTLEKFYTDYCNSKT---NTGAYSCLKVDLLFKREFSYYLIQIYY 231
F+ F +SK TG+Y L + L +RE + YL+QIY+
Sbjct: 233 FS---FLGKTMSSKEVFFYTGSYVRLILRFLVQREVTSYLVQIYW 274
Score = 137 (53.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F + W D RL Y++ D + L ++W+PD +F N K+ H++ + N
Sbjct: 103 DYTITMFFHQTWKDPRLAYHETDLNLT-LDYRMLEKLWVPDCYFLNSKDAFVHDVTVENR 161
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
++HP G+V Y + L C + + ++ C
Sbjct: 162 VFQLHPDGTVRYGMR-LTTTAACSLDLQKFPLDKQTC 197
Score = 77 (32.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 90 PQTPRKNCCRSWLAKF--PTRSKRIDVISRITFPLVFALFNLTYWS 133
P +P + + +K P ++D SRI FPL F +FN+ YW+
Sbjct: 594 PPSPGCSFTEGFSSKLFDPDYVPKVDKWSRILFPLAFVVFNIVYWA 639
>UNIPROTKB|E2QVJ3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 PANTHER:PTHR18945:SF87
Ensembl:ENSCAFT00000030427 Uniprot:E2QVJ3
Length = 649
Score = 184 (69.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 37/105 (35%), Positives = 66/105 (62%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWK-EGDPVQVVKNLHLPR 189
Y ++ T +C ++L+ +PLD+Q+C L++ SYG+T +D++ W+ G+ +Q + LH+P+
Sbjct: 173 YGMRLTTTAACSLDLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAIQGTEKLHIPQ 232
Query: 190 FTLEKFYTDYCNSKT---NTGAYSCLKVDLLFKREFSYYLIQIYY 231
F+ F +SK TG+Y L + L +RE + YL+QIY+
Sbjct: 233 FS---FLGKTMSSKEVFFYTGSYVRLILRFLVQREVTSYLVQIYW 274
Score = 137 (53.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y++ + F + W D RL Y++ D + L ++W+PD +F N K+ H++ + N
Sbjct: 103 DYTITMFFHQTWKDPRLAYHETDLNLT-LDYRMLEKLWVPDCYFLNSKDAFVHDVTVENR 161
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
++HP G+V Y + L C + + ++ C
Sbjct: 162 VFQLHPDGTVRYGMR-LTTTAACSLDLQKFPLDKQTC 197
Score = 77 (32.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 90 PQTPRKNCCRSWLAKF--PTRSKRIDVISRITFPLVFALFNLTYWS 133
P +P + + +K P ++D SRI FPL F +FN+ YW+
Sbjct: 600 PPSPGCSFTEGFSSKLFDPDYVPKVDKWSRILFPLAFVVFNIVYWA 645
>ZFIN|ZDB-GENE-080303-26 [details] [associations]
symbol:zgc:171544 "zgc:171544" species:7955 "Danio
rerio" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008100 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236
ZFIN:ZDB-GENE-080303-26 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:AL732488
EMBL:BX248124 EMBL:CT573003 IPI:IPI00886548
ProteinModelPortal:F1QZB5 Ensembl:ENSDART00000076322 OMA:GSVANTE
Bgee:F1QZB5 Uniprot:F1QZB5
Length = 447
Score = 181 (68.8 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 36/109 (33%), Positives = 60/109 (55%)
Query: 123 VFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQV 181
+F + Y I+ T++C M+L YP+DRQ+C L++ S+G+ D++F W G+ V
Sbjct: 136 IFPNGTVLYALRITTTVACSMDLTKYPMDRQTCMLQLESWGYNVKDVVFYWTRGNQSVSG 195
Query: 182 VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ +L L ++TLE YT + TG Y L KR Y++++ Y
Sbjct: 196 LDHLQLAQYTLEDHYTSESEAVYETGNYPKLIFHFKLKRSILYFILETY 244
Score = 136 (52.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W DERL + DG K L+L +W+PD F + K+ H+I +
Sbjct: 75 DYTATIFLRQRWTDERLCF---DGN-KSLSLDGRLVELLWVPDTFIVDSKKSFLHDITVE 130
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCC---RSW 101
N IRI P G+VLY++ + C + +T R+ C SW
Sbjct: 131 NRLIRIFPNGTVLYALR-ITTTVACSMDLTKYPMDRQTCMLQLESW 175
Score = 73 (30.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
ID SR+TFPL F + NL YW+
Sbjct: 421 IDNYSRLTFPLSFVIINLLYWT 442
>RGD|61902 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) A receptor, rho 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=ISO;IDA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA;ISO] [GO:0007601 "visual perception"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 RGD:61902 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 GO:GO:0005237
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG4RJG1G CTD:2570 EMBL:D38494 IPI:IPI00231130
PIR:I56523 RefSeq:NP_058988.1 UniGene:Rn.48659 STRING:P47742
Ensembl:ENSRNOT00000009973 GeneID:29695 KEGG:rno:29695
UCSC:RGD:61902 InParanoid:P47742 OMA:KIRTGKP BindingDB:P47742
ChEMBL:CHEMBL2953 NextBio:610094 Genevestigator:P47742
GermOnline:ENSRNOG00000007490 Uniprot:P47742
Length = 465
Score = 181 (68.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR T ++ +F ++ Y I++T C M+ +PLD Q+CS
Sbjct: 134 WVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCS 193
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 194 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 253
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 254 NFTLRRHIFFFLLQTYF 270
Score = 128 (50.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + R ++W+PD+FF + K H+ N+
Sbjct: 97 DFTMTLYLRHYWRDERLAFPSSSNRSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 157 MLRVFPDGHVLYSM 170
Score = 72 (30.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + +FNL YWS S
Sbjct: 441 IDKYSRLIFPAFYIVFNLIYWSVFS 465
>UNIPROTKB|P28476 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0007601 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 EMBL:M86868 EMBL:AL121833 EMBL:BC130352
EMBL:BC130354 IPI:IPI00293005 PIR:A38079 RefSeq:NP_002034.3
UniGene:Hs.719891 ProteinModelPortal:P28476 STRING:P28476
PhosphoSite:P28476 DMDM:306526281 PRIDE:P28476 DNASU:2570
Ensembl:ENST00000402938 GeneID:2570 KEGG:hsa:2570 UCSC:uc003pnb.2
GeneCards:GC06M089967 H-InvDB:HIX0200918 HGNC:HGNC:4091
HPA:HPA016467 MIM:137162 neXtProt:NX_P28476 PharmGKB:PA28506
InParanoid:P28476 OMA:GFRIFQN PhylomeDB:P28476 BindingDB:P28476
ChEMBL:CHEMBL2375 ChiTaRS:GABRR2 GenomeRNAi:2570 NextBio:10165
ArrayExpress:P28476 Bgee:P28476 Genevestigator:P28476
GermOnline:ENSG00000111886 Uniprot:P28476
Length = 465
Score = 181 (68.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR T ++ +F ++ Y I++T C M+ +PLD Q+CS
Sbjct: 134 WVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCS 193
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 194 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 253
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 254 NFTLRRHIFFFLLQTYF 270
Score = 128 (50.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL ++ + ++W+PD+FF + K H+ N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 157 MLRVFPDGHVLYSM 170
Score = 70 (29.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + FNL YWS S
Sbjct: 441 IDKYSRLIFPASYIFFNLIYWSVFS 465
>WB|WBGene00013517 [details] [associations]
symbol:lgc-52 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:AL132862
RefSeq:NP_502839.2 UniGene:Cel.28442 ProteinModelPortal:Q9NA62
SMR:Q9NA62 EnsemblMetazoa:Y73F8A.2 GeneID:190669
KEGG:cel:CELE_Y73F8A.2 UCSC:Y73F8A.2 CTD:190669 WormBase:Y73F8A.2
eggNOG:NOG86111 InParanoid:Q9NA62 OMA:PNILLMI NextBio:946574
Uniprot:Q9NA62
Length = 434
Score = 146 (56.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 122 LVFALF-NLTYWST--ISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP 178
++ +F N T W I C MNL+ +PLD CSL SY + D+ W E P
Sbjct: 159 ILLMIFPNGTIWLNYRIRSEAPCQMNLRNFPLDSIRCSLVFESYSYNAADVELQWLEWSP 218
Query: 179 VQVVKN-LHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
V V+N +LP F + G + L V + F+R + +Y++Q+Y
Sbjct: 219 VSTVRNDYNLPDFRMTNITYGSVTEAYTAGMWHRLSVSIHFERLYGFYILQMY 271
Score = 85 (35.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 12 WLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIHPQGS 69
W D+RL ++ D K L+L ++W P++ N K H+ PN+ + I P G+
Sbjct: 109 WNDKRLAFSHLDPCRKNLSLDHDMEPKLWSPNVCIVNSKSTKVHDSPKPNILLMIFPNGT 168
Query: 70 V 70
+
Sbjct: 169 I 169
Score = 73 (30.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 112 IDVISRITFPLVFALFNLTYWSTISLTLSCPM 143
ID ++ + FP +FALFNL YW+ T P+
Sbjct: 401 IDRVASMLFPTMFALFNLVYWAYYLTTSMNPV 432
>WB|WBGene00001586 [details] [associations]
symbol:ggr-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 EMBL:Z46791 GeneTree:ENSGT00540000070314
HOGENOM:HOG000231336 PIR:T19145 RefSeq:NP_496306.2
ProteinModelPortal:Q09453 SMR:Q09453 PaxDb:Q09453
EnsemblMetazoa:C09G5.1 GeneID:191636 KEGG:cel:CELE_C09G5.1
UCSC:C09G5.1 CTD:191636 WormBase:C09G5.1 eggNOG:NOG307434
InParanoid:Q09453 KO:K05397 OMA:REITHHI NextBio:949766
Uniprot:Q09453
Length = 473
Score = 181 (68.8 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 44/119 (36%), Positives = 65/119 (54%)
Query: 118 ITFP--LVFALFNLTYW--STISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW 173
+T P LV+ N T W ISLT+ C +L YPLD Q+C L++ SY + + LI W
Sbjct: 139 VTQPNFLVWIYPNGTVWYDCRISLTVLCMQDLARYPLDSQNCGLRILSYAYDEEQLIIRW 198
Query: 174 KEGDPVQVVKNLHLPRFTLE--KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
G+PV+V + + +P L+ KFYT K TG +S + RE ++++IQ Y
Sbjct: 199 NGGNPVEVNRGIRMPDMHLKHIKFYTK--RDKYATGIWSSAVAEFHVDREITHHIIQSY 255
Score = 139 (54.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++ V + F+E+W+D RL++N+ RI +W PDL+F+N + FH++ PN
Sbjct: 86 DFQVDIYFQEKWVDHRLQHNNTK-RILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNF 144
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSK 110
+ I+P G+V Y C + +TV C LA++P S+
Sbjct: 145 LVWIYPNGTVWYD---------CRISLTV-------LCMQDLARYPLDSQ 178
Score = 71 (30.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+++ID SR FPL F +FN+ YW
Sbjct: 434 AQKIDRYSRALFPLAFIIFNIFYW 457
>UNIPROTKB|E2R4R0 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007601 "visual perception" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 KO:K05190 CTD:2570 EMBL:AAEX03008512
EMBL:AAEX03008511 RefSeq:XP_539039.2 Ensembl:ENSCAFT00000004973
GeneID:481918 KEGG:cfa:481918 Uniprot:E2R4R0
Length = 490
Score = 181 (68.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR T ++ +F ++ Y I++T C M+ +PLD Q+CS
Sbjct: 159 WVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCS 218
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 219 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 278
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 279 NFTLRRHIFFFLLQTYF 295
Score = 125 (49.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 182 MLRVFPDGHVLYSM 195
Score = 70 (29.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + FNL YWS S
Sbjct: 466 IDKYSRLIFPASYIFFNLIYWSVFS 490
>UNIPROTKB|F1ND90 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:AADN02002377
IPI:IPI00593556 Ensembl:ENSGALT00000025443 Uniprot:F1ND90
Length = 436
Score = 180 (68.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 40/137 (29%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR + T ++ +F ++ Y I++T C M+ +PLD Q+CS
Sbjct: 106 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSRFPLDSQTCS 165
Query: 157 LKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK G + ++ + + L +F ++KF+T ++TG Y+ L +
Sbjct: 166 LELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 225
Query: 215 DLLFKREFSYYLIQIYY 231
+R ++L+Q Y+
Sbjct: 226 SFTLRRHIFFFLLQTYF 242
Score = 125 (49.1 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + ++W+PD+FF + K H+ N+
Sbjct: 69 DFTMTLYLRHYWKDERLSFPSTTNNSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 128
Query: 61 YIRIHPQGSVLYSI 74
+R+ P G VLYS+
Sbjct: 129 MLRVFPDGHVLYSM 142
Score = 69 (29.3 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 112 IDVISRITFPLVFALFNLTYWSTIS 136
ID SR+ FP + FNL YWS S
Sbjct: 412 IDKYSRLIFPGTYIFFNLIYWSVFS 436
>ZFIN|ZDB-GENE-080815-1 [details] [associations]
symbol:gabra6b "gamma-aminobutyric acid (GABA) A
receptor, alpha 6b" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-080815-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
EMBL:CABZ01078876 EMBL:CABZ01078877 EMBL:CABZ01078878
EMBL:CABZ01078879 IPI:IPI00962798 ProteinModelPortal:F1QGW0
Ensembl:ENSDART00000124708 Uniprot:F1QGW0
Length = 444
Score = 154 (59.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W+D+RLK+ +G I+ L L S++W PD FF N K HN+ P
Sbjct: 75 EYTMDVFFRQTWIDDRLKF---EGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTP 131
Query: 59 NVYIRIHPQGSVLYSI 74
N RI G++LY++
Sbjct: 132 NKLFRIMQNGTILYTM 147
Score = 141 (54.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 39/130 (30%), Positives = 67/130 (51%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + + +T P +F + N T T+ LT++ CPM L +P+D SC LK SY
Sbjct: 118 RNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYA 177
Query: 164 WTTDDLIFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++++ WK+G V+V + + L ++ L K+NTG Y + V +R
Sbjct: 178 YPMSEIVYTWKKGPLFSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYIVMTVYFHLQR 237
Query: 221 EFSYYLIQIY 230
+ ++LIQ Y
Sbjct: 238 KMGFFLIQTY 247
Score = 73 (30.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID SRI FPL F FNL YW
Sbjct: 410 IDKYSRILFPLSFGAFNLVYW 430
>ZFIN|ZDB-GENE-081105-170 [details] [associations]
symbol:gabrd "gamma-aminobutyric acid (GABA) A
receptor, delta" species:7955 "Danio rerio" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 ZFIN:ZDB-GENE-081105-170
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:FP017199 IPI:IPI00998683
Ensembl:ENSDART00000132000 ArrayExpress:E9QHL0 Bgee:E9QHL0
Uniprot:E9QHL0
Length = 469
Score = 165 (63.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDP-VQVVKNLHL 187
+ Y S I+ T++C M+L YP+D Q C L + SYG++++D+++ W E + + L L
Sbjct: 163 ILYSSRITSTVACDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWSESQKLIHGLDKLEL 222
Query: 188 PRFTLE--KFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+FT+ +F T+ N K+ G + L + +R Y+IQ Y
Sbjct: 223 SQFTITDYRFVTEMMNFKS-AGRFPRLSLRFQLRRNRGVYIIQSY 266
Score = 153 (58.9 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + R+ W D+RL YN + + L ++W+PD F N K FH++ + N
Sbjct: 95 EYTMTVFLRQSWRDDRLSYN-HTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 153
Query: 61 YIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
IR+ P G +LYS S + + C++ +T + C
Sbjct: 154 LIRLQPDGVILYS-SRITSTVACDMDLTKYPMDEQEC 189
Score = 75 (31.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 95 KNCCRSWLAKFPTRSKRIDVISRITFPLVFALFNLTYW 132
K CC+ K P + ID+ +R FP FA+ N+ YW
Sbjct: 431 KKCCK---CK-PIDADTIDIYARAVFPFTFAVVNVIYW 464
>UNIPROTKB|F1S3S9 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:CU856397
EMBL:FP312872 Ensembl:ENSSSCT00000009639 Uniprot:F1S3S9
Length = 442
Score = 143 (55.4 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + F + W D RLK+N ++ L ++W+PD FF N ++ H I PN
Sbjct: 85 EYTIDIIFAQTWFDSRLKFNS-TMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNR 143
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLY++
Sbjct: 144 LLRIWNDGRVLYTL 157
Score = 88 (36.0 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 98 CR--SWL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR SW + R +ID SRI FP FALFNL YW
Sbjct: 399 CRTGSWREGRIHIRIAKIDSYSRIFFPTAFALFNLVYW 436
>UNIPROTKB|A8MWU7 [details] [associations]
symbol:GABRG2 "cDNA FLJ59748, highly similar to
Gamma-aminobutyric-acid receptor gamma-2 subunit" species:9606
"Homo sapiens" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HOGENOM:HOG000231337 HOVERGEN:HBG051707 UniGene:Hs.7195
HGNC:HGNC:4087 EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
EMBL:AK299640 IPI:IPI00982076 SMR:A8MWU7 STRING:A8MWU7
Ensembl:ENST00000393933 Uniprot:A8MWU7
Length = 372
Score = 150 (57.9 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 15 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 71
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 72 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 100
Score = 128 (50.1 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 51 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 109
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 110 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMS 168
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 169 VYFDLSRRMGYFTIQTY 185
Score = 75 (31.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 329 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 366
>UNIPROTKB|Q8N1C3 [details] [associations]
symbol:GABRG1 "Gamma-aminobutyric acid receptor subunit
gamma-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 EMBL:CH471069 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 EMBL:AK122845 EMBL:CR933628
EMBL:BC031087 IPI:IPI00166138 RefSeq:NP_775807.2 UniGene:Hs.375051
ProteinModelPortal:Q8N1C3 SMR:Q8N1C3 STRING:Q8N1C3
PhosphoSite:Q8N1C3 DMDM:209572630 PRIDE:Q8N1C3 DNASU:2565
Ensembl:ENST00000295452 GeneID:2565 KEGG:hsa:2565 UCSC:uc003gxb.3
CTD:2565 GeneCards:GC04M045953 HGNC:HGNC:4086 HPA:HPA035622
MIM:137166 neXtProt:NX_Q8N1C3 PharmGKB:PA28500 InParanoid:Q8N1C3
KO:K05186 OMA:HYFTSNK OrthoDB:EOG44BB25 PhylomeDB:Q8N1C3
BindingDB:Q8N1C3 ChEMBL:CHEMBL4044 GenomeRNAi:2565 NextBio:10141
ArrayExpress:Q8N1C3 Bgee:Q8N1C3 CleanEx:HS_GABRG1
Genevestigator:Q8N1C3 GermOnline:ENSG00000163285 Uniprot:Q8N1C3
Length = 465
Score = 143 (55.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + F + W D RLK+N ++ L ++W+PD FF N ++ H I PN
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNS-TMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNR 166
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLY++
Sbjct: 167 LLRIWNDGRVLYTL 180
Score = 88 (36.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 98 CR--SWL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR SW + R +ID SRI FP FALFNL YW
Sbjct: 422 CRTGSWREGRIHIRIAKIDSYSRIFFPTAFALFNLVYW 459
>UNIPROTKB|E2RH22 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:HYFTSNK
EMBL:AAEX03009032 Ensembl:ENSCAFT00000002978 Uniprot:E2RH22
Length = 468
Score = 143 (55.4 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
EY++ + F + W D RLK+N ++ L ++W+PD FF N ++ H I PN
Sbjct: 111 EYTIDIIFAQTWFDSRLKFNS-TMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNR 169
Query: 61 YIRIHPQGSVLYSI 74
+RI G VLY++
Sbjct: 170 LLRIWNDGRVLYTL 183
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 101 WLAKFPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ R+ R IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 147 WIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQLHNFPMDEHSCP 206
Query: 157 LKMASYGWTTDDLIFLWKEGDPVQVV--KNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKV 214
L+ +SYG+ +++ + WK+ V+V K L +F S T +G Y + +
Sbjct: 207 LEFSSYGYPKNEIEYKWKKPS-VEVADPKYWRLYQFAFVGLRNSTEISHTISGDYIIMTI 265
Query: 215 DLLFKREFSYYLIQIY 230
R Y+ IQ Y
Sbjct: 266 FFDLSRRMGYFTIQTY 281
Score = 88 (36.0 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 98 CR--SWL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR SW + R +ID SRI FP FALFNL YW
Sbjct: 425 CRTGSWREGRIHIRIAKIDSYSRIFFPTAFALFNLVYW 462
>MGI|MGI:1888498 [details] [associations]
symbol:Gabrq "gamma-aminobutyric acid (GABA) A receptor,
subunit theta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISS] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236 MGI:MGI:1888498
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GeneTree:ENSGT00630000089685 CTD:55879
eggNOG:NOG317370 HOGENOM:HOG000049189 HOVERGEN:HBG051708 KO:K05192
OrthoDB:EOG48SGSN PANTHER:PTHR18945:SF87 EMBL:AF189260
IPI:IPI00124252 RefSeq:NP_065234.1 UniGene:Mm.117125
UniGene:Mm.487532 ProteinModelPortal:Q9JLF1 SMR:Q9JLF1
PhosphoSite:Q9JLF1 PRIDE:Q9JLF1 Ensembl:ENSMUST00000033711
GeneID:57249 KEGG:mmu:57249 InParanoid:Q9JLF1 BindingDB:Q9JLF1
ChEMBL:CHEMBL3249 NextBio:313527 Bgee:Q9JLF1 Genevestigator:Q9JLF1
GermOnline:ENSMUSG00000031344 Uniprot:Q9JLF1
Length = 638
Score = 181 (68.8 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 33/102 (32%), Positives = 62/102 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++ T +C ++L+ +P+D+QSC L++ SYG+T +D++ W++ + + + LH+P++
Sbjct: 173 YGIRLTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIHITDGLHIPQY 232
Query: 191 T-LEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
T L + T TG+Y L V +RE YL+Q+Y+
Sbjct: 233 TYLGRTITSK-EVYFYTGSYMRLIVKFQVQREVRSYLVQVYW 273
Score = 129 (50.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + + W D RL Y Y+ + LTL ++W+PD +F N K+ H++ +
Sbjct: 103 DYTITMFLHQTWKDTRLAY--YETNLN-LTLDYRMHEKLWVPDCYFVNSKDAFVHDVTVE 159
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N ++HP G+V Y I L C + + +++C
Sbjct: 160 NRVFQLHPDGTVRYGIR-LTTTAACSLDLQKFPMDKQSC 197
Score = 78 (32.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYW 132
P R ++D SR FPL F LFN+ YW
Sbjct: 607 PNRVPKVDRWSRFLFPLSFGLFNVVYW 633
>UNIPROTKB|G3V875 [details] [associations]
symbol:Gabrq "Gamma-aminobutyric acid A receptor, theta,
isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008101 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:FFHQTWK PANTHER:PTHR18945:SF87
EMBL:CH474110 UniGene:Rn.81067 ProteinModelPortal:G3V875
Ensembl:ENSRNOT00000022880 RGD:68331 Uniprot:G3V875
Length = 640
Score = 181 (68.8 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 33/102 (32%), Positives = 62/102 (60%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRF 190
Y ++ T +C ++L+ +P+D+QSC L++ SYG+T +D++ W++ + + + LH+P++
Sbjct: 173 YGIRLTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIHITDELHIPQY 232
Query: 191 T-LEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
T L + T TG+Y L V +RE YL+Q+Y+
Sbjct: 233 TYLGRTITSK-EVYFYTGSYMRLIVKFQVQREVRSYLVQVYW 273
Score = 127 (49.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEA--SRVWMPDLFFSNEKEGHFHNIIMP 58
+Y++ + + W D RL Y Y+ + LTL ++W+PD +F N K+ H++
Sbjct: 103 DYTITMFLHQTWKDTRLAY--YETNLN-LTLDYRMHEKLWVPDCYFVNSKDAFVHDVTAE 159
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNC 97
N ++HP G+V Y I L C + + +++C
Sbjct: 160 NRVFQLHPDGTVQYGIR-LTTTAACSLDLQKFPMDKQSC 197
Score = 78 (32.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 106 PTRSKRIDVISRITFPLVFALFNLTYW 132
P R ++D SR FPL F LFN+ YW
Sbjct: 609 PNRVPKVDRWSRFLFPLSFGLFNVVYW 635
>UNIPROTKB|F1NES8 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490 IPI:IPI00683388
Ensembl:ENSGALT00000027026 Uniprot:F1NES8
Length = 430
Score = 152 (58.6 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RL++N +K LTL SR+W+PD FF N K H I P
Sbjct: 66 EYTIDIFFAQTWYDRRLRFNS---TLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTP 122
Query: 59 NVYIRIHPQGSVLYSI 74
N +RI G VLY++
Sbjct: 123 NQLLRIWNDGKVLYTL 138
Score = 119 (46.9 bits), Expect = 0.00010, P = 0.00010
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 99 RSWLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQ 153
R W+ F SKR D IT P + ++N + Y +++ C + L+ +P+D
Sbjct: 100 RIWIPDTFFRNSKRADS-HWITTPNQLLRIWNDGKVLYTLRLTIEAECLLQLQNFPMDTH 158
Query: 154 SCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCL 212
SC L +SYG+ +++++ W+ V + L +F +T G Y +
Sbjct: 159 SCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFTGLRNTSEVLRTGAGEYMVM 218
Query: 213 KVDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 219 TVSFDLSRRMGYFAIQTY 236
Score = 73 (30.8 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
R+D SR+ FP F LFN+ YW
Sbjct: 403 RLDSYSRVFFPTAFLLFNIVYW 424
>UNIPROTKB|G1K310 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490
Ensembl:ENSGALT00000011777 OMA:FFCCIED Uniprot:G1K310
Length = 439
Score = 152 (58.6 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RL++N +K LTL SR+W+PD FF N K H I P
Sbjct: 75 EYTIDIFFAQTWYDRRLRFNS---TLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTP 131
Query: 59 NVYIRIHPQGSVLYSI 74
N +RI G VLY++
Sbjct: 132 NQLLRIWNDGKVLYTL 147
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 99 RSWLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQ 153
R W+ F SKR D IT P + ++N + Y +++ C + L+ +P+D
Sbjct: 109 RIWIPDTFFRNSKRADS-HWITTPNQLLRIWNDGKVLYTLRLTIEAECLLQLQNFPMDTH 167
Query: 154 SCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCL 212
SC L +SYG+ +++++ W+ V + L +F +T G Y +
Sbjct: 168 SCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFTGLRNTSEVLRTGAGEYMVM 227
Query: 213 KVDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 228 TVSFDLSRRMGYFAIQTY 245
Score = 73 (30.8 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
R+D SR+ FP F LFN+ YW
Sbjct: 412 RLDSYSRVFFPTAFLLFNIVYW 433
>UNIPROTKB|E1C7Q7 [details] [associations]
symbol:E1C7Q7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AADN02046491 EMBL:AADN02046492 EMBL:AADN02046493
EMBL:AADN02046494 EMBL:AADN02046495 IPI:IPI00602664
ProteinModelPortal:E1C7Q7 Ensembl:ENSGALT00000011429 OMA:VKNPYHI
Uniprot:E1C7Q7
Length = 437
Score = 177 (67.4 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 33/101 (32%), Positives = 59/101 (58%)
Query: 131 YWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEG-DPVQVVKNLHLPR 189
Y I+ T++C M+L YP+D+Q+C+L++ S+G+ +D++F W G D V+ + L L +
Sbjct: 146 YAIRITTTVACSMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNDSVRGLDTLQLAQ 205
Query: 190 FTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+T+E +T + TG Y L KR Y++++ Y
Sbjct: 206 YTVEDHFTSVSEAVYETGRYPKLVFHFELKRNILYFILETY 246
Score = 139 (54.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 34/106 (32%), Positives = 55/106 (51%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
+Y+ + R++W DERL + DG K L+L +W+PD F + K+ H+I +
Sbjct: 77 DYTATIFLRQRWTDERLCF---DGN-KSLSLDGRLVEMLWVPDTFIVDSKKSFLHDITVE 132
Query: 59 NVYIRIHPQGSVLYSISDLDNMRQCEVHMTVPQTPRKNCC---RSW 101
N IRI+P G+VLY+I + C + +T ++ C SW
Sbjct: 133 NRLIRIYPNGTVLYAIR-ITTTVACSMDLTKYPMDKQTCTLQLESW 177
Score = 58 (25.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 112 IDVISRITFPLVFALFNLTYW 132
ID +R +FPL F + N+ YW
Sbjct: 411 IDNYARFSFPLSFIIINVFYW 431
>UNIPROTKB|E1BE96 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2559
OMA:HSDSKYH EMBL:DAAA02020909 EMBL:DAAA02020910 IPI:IPI00704287
RefSeq:NP_001137557.1 UniGene:Bt.39107 ProteinModelPortal:E1BE96
Ensembl:ENSBTAT00000017637 GeneID:539194 KEGG:bta:539194
NextBio:20877838 Uniprot:E1BE96
Length = 453
Score = 150 (57.9 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L+L S++W PD FF N K+ HN+ P
Sbjct: 76 EYTMDVFFRQTWTDERLKFG---GPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 59 NVYIRIHPQGSVLYSI 74
N RI G++LY++
Sbjct: 133 NKLFRIMQNGTILYTM 148
Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + + +T P +F + N T T+ LT++ CPM L +P+D +C LK SY
Sbjct: 119 RNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMKLVNFPMDGHACPLKFGSYA 178
Query: 164 WTTDDLIFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ WK+G V+V + + L ++ L K+NTG Y + V +R
Sbjct: 179 YPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQR 238
Query: 221 EFSYYLIQIY 230
+ Y++IQIY
Sbjct: 239 KMGYFMIQIY 248
Score = 76 (31.8 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYW 437
>UNIPROTKB|Q16445 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471062 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0030425 GO:GO:0042734 GO:GO:0043083
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
DrugBank:DB00186 GO:GO:0051932 DrugBank:DB00683 DrugBank:DB01544
DrugBank:DB00404 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH EMBL:S81944 EMBL:AK289461 EMBL:BC096241
EMBL:BC096242 EMBL:BC099640 EMBL:BC099641 IPI:IPI00002215
RefSeq:NP_000802.2 UniGene:Hs.90791 ProteinModelPortal:Q16445
SMR:Q16445 STRING:Q16445 PhosphoSite:Q16445 DMDM:126302548
PRIDE:Q16445 Ensembl:ENST00000274545 GeneID:2559 KEGG:hsa:2559
UCSC:uc003lyu.2 GeneCards:GC05P161045 H-InvDB:HIX0005382
HGNC:HGNC:4080 MIM:137143 neXtProt:NX_Q16445 PharmGKB:PA28494
InParanoid:Q16445 PhylomeDB:Q16445 BindingDB:Q16445
ChEMBL:CHEMBL2579 GenomeRNAi:2559 NextBio:10107 ArrayExpress:Q16445
Bgee:Q16445 CleanEx:HS_GABRA6 Genevestigator:Q16445
GermOnline:ENSG00000145863 GO:GO:0022851 Uniprot:Q16445
Length = 453
Score = 150 (57.9 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L+L S++W PD FF N K+ HN+ P
Sbjct: 76 EYTMDVFFRQTWTDERLKFG---GPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 59 NVYIRIHPQGSVLYSI 74
N RI G++LY++
Sbjct: 133 NKLFRIMQNGTILYTM 148
Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + + +T P +F + N T T+ LT++ CPM L +P+D +C LK SY
Sbjct: 119 RNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYA 178
Query: 164 WTTDDLIFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ WK+G V+V + + L ++ L K+NTG Y + V +R
Sbjct: 179 YPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQR 238
Query: 221 EFSYYLIQIY 230
+ Y++IQIY
Sbjct: 239 KMGYFMIQIY 248
Score = 76 (31.8 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYW 437
>UNIPROTKB|P34904 [details] [associations]
symbol:GABRG4 "Gamma-aminobutyric acid receptor subunit
gamma-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2564 EMBL:X73533 IPI:IPI00595504 PIR:S38296
RefSeq:NP_990576.1 UniGene:Gga.692 ProteinModelPortal:P34904
GeneID:396173 KEGG:gga:396173 InParanoid:P34904 NextBio:20816227
Uniprot:P34904
Length = 457
Score = 152 (58.6 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RL++N +K LTL SR+W+PD FF N K H I P
Sbjct: 93 EYTIDIFFAQTWYDRRLRFNS---TLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTP 149
Query: 59 NVYIRIHPQGSVLYSI 74
N +RI G VLY++
Sbjct: 150 NQLLRIWNDGKVLYTL 165
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 99 RSWLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQ 153
R W+ F SKR D IT P + ++N + Y +++ C + L+ +P+D
Sbjct: 127 RIWIPDTFFRNSKRADS-HWITTPNQLLRIWNDGKVLYTLRLTIEAECLLQLQNFPMDTH 185
Query: 154 SCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCL 212
SC L +SYG+ +++++ W+ V + L +F +T G Y +
Sbjct: 186 SCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFTGLRNTSEVLRTGAGEYMVM 245
Query: 213 KVDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 246 TVSFDLSRRMGYFAIQTY 263
Score = 73 (30.8 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
R+D SR+ FP F LFN+ YW
Sbjct: 430 RLDSYSRVFFPTAFLLFNIVYW 451
>UNIPROTKB|F1NID8 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00577501 EMBL:AADN02035879
Ensembl:ENSGALT00000002621 Uniprot:F1NID8
Length = 438
Score = 150 (57.9 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 73 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 129
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 130 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 158
Score = 130 (50.8 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 109 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSC 167
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++I+ WK V+V ++ L +F+ KT +G Y +
Sbjct: 168 PLEFSSYGYPREEIIYQWKRSS-VEVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMS 226
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 227 VYFNLSRRMGYFTIQTY 243
Score = 75 (31.5 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 395 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 432
>UNIPROTKB|F1NVG2 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:GFTSQKS
EMBL:AADN02035879 IPI:IPI00820989 Ensembl:ENSGALT00000034794
Uniprot:F1NVG2
Length = 445
Score = 150 (57.9 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 144
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 145 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 173
Score = 130 (50.8 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 124 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSC 182
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++I+ WK V+V ++ L +F+ KT +G Y +
Sbjct: 183 PLEFSSYGYPREEIIYQWKRSS-VEVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMS 241
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 242 VYFNLSRRMGYFTIQTY 258
Score = 75 (31.5 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 402 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 439
>UNIPROTKB|F1M4V9 [details] [associations]
symbol:Gabrg2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR005437
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00950881 Ensembl:ENSRNOT00000065955
ArrayExpress:F1M4V9 Uniprot:F1M4V9
Length = 445
Score = 150 (57.9 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 144
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 145 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 173
Score = 128 (50.1 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 124 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 182
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 183 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMS 241
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 242 VYFDLSRRMGYFTIQTY 258
Score = 75 (31.5 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 402 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 439
>UNIPROTKB|E2RSQ0 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030534 "adult behavior" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:GFTSQKS EMBL:AAEX03003042
Ensembl:ENSCAFT00000027292 NextBio:20862353 Uniprot:E2RSQ0
Length = 453
Score = 150 (57.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 144
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 145 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 173
Score = 128 (50.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 124 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 182
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 183 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMS 241
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 242 VYFDLSRRMGYFTIQTY 258
Score = 75 (31.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 410 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 447
>RGD|61966 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor, gamma 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;ISO;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005237
"inhibitory extracellular ligand-gated ion channel activity"
evidence=TAS] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA;TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA;ISO;TAS] [GO:0007268 "synaptic transmission"
evidence=IEA;ISO] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0032590 "dendrite membrane" evidence=IDA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IDA] [GO:0060077 "inhibitory synapse" evidence=IDA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0005737 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 PDB:2PR9 PDBsum:2PR9 GO:GO:0051932 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237
GeneTree:ENSGT00540000070314 GO:GO:0060077 KO:K05186 CTD:2566
EMBL:L08497 IPI:IPI00192646 PIR:JQ0077 RefSeq:NP_899156.1
UniGene:Rn.230132 ProteinModelPortal:P18508 SMR:P18508
MINT:MINT-3371576 STRING:P18508 PRIDE:P18508
Ensembl:ENSRNOT00000004619 GeneID:29709 KEGG:rno:29709
UCSC:RGD:61966 BindingDB:P18508 ChEMBL:CHEMBL297
EvolutionaryTrace:P18508 NextBio:610135 ArrayExpress:P18508
Genevestigator:P18508 GermOnline:ENSRNOG00000003241 Uniprot:P18508
Length = 466
Score = 150 (57.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 165
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 166 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 194
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 145 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 203
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 204 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMS 262
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 263 VYFDLSRRMGYFTIQTY 279
Score = 75 (31.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 423 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 460
>UNIPROTKB|P18507 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
[GO:0051932 "synaptic transmission, GABAergic" evidence=ISS]
[GO:0032590 "dendrite membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0032590 GO:GO:0034707 GO:GO:0005254
Orphanet:64280 GO:GO:0051932 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 Orphanet:36387 KO:K05186
OrthoDB:EOG44BB25 CTD:2566 EMBL:X15376 EMBL:AF165124 EMBL:BC059389
EMBL:BC069348 EMBL:BC074795 IPI:IPI00000023 IPI:IPI00419200
PIR:S03905 RefSeq:NP_000807.2 RefSeq:NP_944494.1 UniGene:Hs.7195
ProteinModelPortal:P18507 SMR:P18507 STRING:P18507
PhosphoSite:P18507 DMDM:116242488 PRIDE:P18507
Ensembl:ENST00000356592 Ensembl:ENST00000361925 GeneID:2566
KEGG:hsa:2566 UCSC:uc003lyy.4 UCSC:uc003lyz.4 GeneCards:GC05P161494
HGNC:HGNC:4087 MIM:137164 MIM:604233 MIM:607208 MIM:607681
MIM:611277 neXtProt:NX_P18507 Orphanet:33069 PharmGKB:PA28501
BindingDB:P18507 ChEMBL:CHEMBL1788 GenomeRNAi:2566 NextBio:10145
ArrayExpress:P18507 Bgee:P18507 CleanEx:HS_GABRG2
Genevestigator:P18507 GermOnline:ENSG00000113327 Uniprot:P18507
Length = 467
Score = 150 (57.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 166
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 167 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 195
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 146 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 204
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 205 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMS 263
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 264 VYFDLSRRMGYFTIQTY 280
Score = 75 (31.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 424 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 461
>UNIPROTKB|G3MYR4 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000066231 Uniprot:G3MYR4
Length = 467
Score = 150 (57.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 166
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 167 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 195
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 146 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 204
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 205 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMT 263
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 264 VYFDLSRRMGYFTIQTY 280
Score = 75 (31.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 424 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 461
>UNIPROTKB|F1RR72 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030534 "adult behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0006821 GeneTree:ENSGT00540000070314 KO:K05186
CTD:2566 OMA:GFTSQKS EMBL:CU929724 RefSeq:XP_003359873.1
UniGene:Ssc.93419 Ensembl:ENSSSCT00000018537 GeneID:100516405
KEGG:ssc:100516405 Uniprot:F1RR72
Length = 467
Score = 150 (57.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 166
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 167 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 195
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 146 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 204
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 205 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMT 263
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 264 VYFDLSRRMGYFTIQTY 280
Score = 75 (31.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 424 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 461
>FB|FBgn0001134 [details] [associations]
symbol:Grd "Glycine receptor" species:7227 "Drosophila
melanogaster" [GO:0015276 "ligand-gated ion channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IDA] [GO:0006811
"ion transport" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 EMBL:AE014296
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0005261
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 EMBL:X78349 PIR:S60749
RefSeq:NP_524131.1 UniGene:Dm.2530 ProteinModelPortal:Q24352
SMR:Q24352 STRING:Q24352 PRIDE:Q24352 EnsemblMetazoa:FBtr0075139
GeneID:39984 KEGG:dme:Dmel_CG7446 CTD:39984 FlyBase:FBgn0001134
GeneTree:ENSGT00540000070314 InParanoid:Q24352 OMA:EVDIMVR
OrthoDB:EOG4W9GKJ PhylomeDB:Q24352 GenomeRNAi:39984 NextBio:816405
Bgee:Q24352 GermOnline:CG7446 GO:GO:0016933 Uniprot:Q24352
Length = 686
Score = 156 (60.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 30/86 (34%), Positives = 50/86 (58%)
Query: 2 YSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVY 61
YS+ FR+ W+D+RL + + L+++ +R+W PD +F N K+ + H I PN +
Sbjct: 154 YSMDCYFRQSWVDKRLAFEGAQDTLA-LSVSMLARIWKPDTYFYNGKQSYLHTITTPNKF 212
Query: 62 IRIHPQGSVLYSISDLDNMRQCEVHM 87
+RI+ G VLYS S L C +++
Sbjct: 213 VRIYQNGRVLYS-SRLTIKAGCPMNL 237
Score = 149 (57.5 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 120 FPLVFALFNLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLW-KEGDP 178
F ++ + Y S +++ CPMNL +P+D Q C LK S+G+TT D+I+ W KE P
Sbjct: 212 FVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSDVIYRWNKERPP 271
Query: 179 VQVVKNLHLPRFTL 192
V + +++ L +F L
Sbjct: 272 VAIAEDMKLSQFDL 285
Score = 71 (30.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 111 RIDVISRITFPLVFALFNLTYW 132
+ID SRI FPL+F L N+ YW
Sbjct: 646 KIDRASRIVFPLLFILINVFYW 667
Score = 46 (21.3 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 203 KTN-TGAYSCLKVDLLFKREFSYYLIQIY 230
+TN YS L V+ +R +LIQ+Y
Sbjct: 371 ETNHPSEYSMLMVNFHLQRHMGNFLIQVY 399
>ZFIN|ZDB-GENE-041014-174 [details] [associations]
symbol:gabrr2b "gamma-aminobutyric acid (GABA) A
receptor, rho 2b" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-041014-174 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:BX248418 IPI:IPI00497783 ProteinModelPortal:F1Q9D5
Ensembl:ENSDART00000023304 ArrayExpress:F1Q9D5 Uniprot:F1Q9D5
Length = 427
Score = 175 (66.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 38/137 (27%), Positives = 75/137 (54%)
Query: 101 WLAK-FPTRSKRIDVISRITFPLVFALF---NLTYWSTISLTLSCPMNLKLYPLDRQSCS 156
W+ F SKR + T ++ ++ ++ Y +++T +C M+ +PLD Q+C+
Sbjct: 97 WVPDVFFVHSKRSFIHDTTTENIMIRVYPDGHVLYSLRVTVTSACNMDFSRFPLDTQTCT 156
Query: 157 LKMASYGWTTDDLIFLWKEGDP-VQVVKNLHLPRFTLEKFYT-DYCNSKTNTGAYSCLKV 214
L++ SY +T +DL+ WK GD + + L +F ++KF+T ++TG Y+ L +
Sbjct: 157 LELESYAYTDEDLMLYWKSGDESLSTDDKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 216
Query: 215 DLLFKREFSYYLIQIYY 231
+ +R ++L+Q Y+
Sbjct: 217 NFTLRRHIFFFLLQTYF 233
Score = 133 (51.9 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
++++ L R W DERL + + ++W+PD+FF + K H+ N+
Sbjct: 60 DFTMTLYLRHYWKDERLSFPSKHNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENI 119
Query: 61 YIRIHPQGSVLYSI 74
IR++P G VLYS+
Sbjct: 120 MIRVYPDGHVLYSL 133
Score = 69 (29.3 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 112 IDVISRITFPLVFALFNLTYWS 133
ID SR+ FP F FNL YWS
Sbjct: 403 IDAYSRMIFPGAFIFFNLIYWS 424
>UNIPROTKB|F1LWJ7 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00565653 Ensembl:ENSRNOT00000047262
ArrayExpress:F1LWJ7 Uniprot:F1LWJ7
Length = 452
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L+L S++W PD FF N K+ HN+ P
Sbjct: 75 EYTMDVFFRQTWTDERLKFK---GPAEILSLNNLMVSKIWTPDTFFQNGKKSIAHNMTTP 131
Query: 59 NVYIRIHPQGSVLYSI 74
N R+ G++LY++
Sbjct: 132 NKLFRLMQNGTILYTM 147
Score = 147 (56.8 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 40/124 (32%), Positives = 65/124 (52%)
Query: 114 VISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDL 169
+ +T P +F L N T T+ LT++ CPM L +P+D +C LK SY + ++
Sbjct: 124 IAHNMTTPNKLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEI 183
Query: 170 IFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYL 226
I+ WK+G V+V + + L ++ L K+NTG Y + V +R+ Y++
Sbjct: 184 IYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFM 243
Query: 227 IQIY 230
IQIY
Sbjct: 244 IQIY 247
Score = 76 (31.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 413 TSKIDQYSRILFPVAFAGFNLVYW 436
>UNIPROTKB|P21548 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 CTD:2566 EMBL:X54944 IPI:IPI00577501
PIR:S13086 RefSeq:NP_990676.1 UniGene:Gga.50106
ProteinModelPortal:P21548 SMR:P21548 GeneID:396289 KEGG:gga:396289
NextBio:20816340 Uniprot:P21548
Length = 474
Score = 150 (57.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 165
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 166 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 194
Score = 130 (50.8 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 145 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSC 203
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++I+ WK V+V ++ L +F+ KT +G Y +
Sbjct: 204 PLEFSSYGYPREEIIYQWKRSS-VEVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMS 262
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 263 VYFNLSRRMGYFTIQTY 279
Score = 75 (31.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 431 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 468
>MGI|MGI:95623 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IDA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IDA] [GO:0007268 "synaptic transmission"
evidence=IDA] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030534 "adult
behavior" evidence=IMP] [GO:0032590 "dendrite membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060077 "inhibitory synapse"
evidence=ISO] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 MGI:MGI:95623 GO:GO:0005886 GO:GO:0005737
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 OrthoDB:EOG44BB25 CTD:2566
EMBL:M86572 EMBL:M62374 EMBL:AF233775 EMBL:AF233776 EMBL:AF233777
EMBL:AF233778 EMBL:AF233779 EMBL:AF233780 EMBL:AF233781
EMBL:AF233782 EMBL:AF233783 EMBL:AF233784 EMBL:AF233785
EMBL:AF233786 EMBL:AF233787 EMBL:AF233788 EMBL:AF233789
EMBL:AF233790 EMBL:AF233791 EMBL:AF233792 EMBL:AF233793
EMBL:AF233794 EMBL:AF233795 EMBL:AF233796 EMBL:AF233797
EMBL:AF233798 EMBL:AF233799 EMBL:AF233800 EMBL:AF233801
EMBL:AF233802 EMBL:BC031762 IPI:IPI00131369 IPI:IPI00228358
PIR:JH0316 PIR:JH0317 RefSeq:NP_032099.1 UniGene:Mm.5309
ProteinModelPortal:P22723 SMR:P22723 DIP:DIP-48995N STRING:P22723
PhosphoSite:P22723 PRIDE:P22723 Ensembl:ENSMUST00000070725
Ensembl:ENSMUST00000070735 GeneID:14406 KEGG:mmu:14406
UCSC:uc007imb.1 InParanoid:P22723 OMA:GFTSQKS BindingDB:P22723
ChEMBL:CHEMBL2941 NextBio:285971 Bgee:P22723 Genevestigator:P22723
GermOnline:ENSMUSG00000020436 Uniprot:P22723
Length = 474
Score = 150 (57.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 165
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 166 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 194
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 145 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 203
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 204 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMS 262
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 263 VYFDLSRRMGYFTIQTY 279
Score = 75 (31.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 431 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 468
>UNIPROTKB|Q6PW52 [details] [associations]
symbol:Gabrg2 "GABA-A gamma2 long isoform" species:10116
"Rattus norvegicus" [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 EMBL:CH473948 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:GFTSQKS UniGene:Rn.230132 EMBL:AY574252
IPI:IPI00202998 SMR:Q6PW52 STRING:Q6PW52 Ensembl:ENSRNOT00000004658
InParanoid:Q6PW52 Genevestigator:Q6PW52 Uniprot:Q6PW52
Length = 474
Score = 150 (57.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 165
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 166 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 194
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 145 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 203
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 204 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMS 262
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 263 VYFDLSRRMGYFTIQTY 279
Score = 75 (31.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 431 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 468
>UNIPROTKB|F1MIG7 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00690304 UniGene:Bt.408
OMA:GFTSQKS EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000013543 ArrayExpress:F1MIG7 Uniprot:F1MIG7
Length = 475
Score = 150 (57.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 166
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 167 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 195
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 146 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 204
Query: 156 SLKMASYGWTTDDLIFLWKEGDPVQV--VKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLK 213
L+ +SYG+ +++++ WK V+V ++ L +F+ KT +G Y +
Sbjct: 205 PLEFSSYGYPREEIVYQWKRSS-VEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMT 263
Query: 214 VDLLFKREFSYYLIQIY 230
V R Y+ IQ Y
Sbjct: 264 VYFDLSRRMGYFTIQTY 280
Score = 75 (31.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 432 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 469
>WB|WBGene00021437 [details] [associations]
symbol:lgc-42 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000231336 EMBL:FO081640
RefSeq:NP_497489.3 ProteinModelPortal:Q9N517 SMR:Q9N517
DIP:DIP-26084N IntAct:Q9N517 MINT:MINT-1049455
EnsemblMetazoa:Y39A3B.2 GeneID:189722 KEGG:cel:CELE_Y39A3B.2
UCSC:Y39A3B.2 CTD:189722 WormBase:Y39A3B.2 eggNOG:NOG290789
InParanoid:Q9N517 OMA:CHIAIDR NextBio:943412 Uniprot:Q9N517
Length = 412
Score = 174 (66.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 71 LYSISDLDNMRQCEV-HMTVPQTPRKNCCRSWLAKFPTRSKRIDVISRITFPLVFALF-- 127
LY D+MR E H+ V + + WL + R ++T F +F
Sbjct: 68 LYMSWQDDSMRHNETEHVLV--NDKDILDKIWLPDLYFANARTAYFHKVTVHN-FNMFIS 124
Query: 128 ---NLTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKN 184
++Y + ++L L+C ++LK YPLD Q+C +K+ SY +++ W DP++
Sbjct: 125 PQGTISYGTRVTLNLACNLDLKDYPLDYQTCYIKVISYAHVKNEMNVSWFPNDPIRFNPE 184
Query: 185 LHLPRFTLEKFYTDYCN---------SKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+ LP F + DYCN + + G +SCL L KR ++L+Q Y
Sbjct: 185 IDLPEFHIRALDKDYCNGVFLYTLTHNSSRVGEFSCLLGMLKLKRAIGFHLVQSY 239
Score = 113 (44.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 18/71 (25%), Positives = 39/71 (54%)
Query: 2 YSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVY 61
Y + + W D+ +++N+ + + ++W+PDL+F+N + +FH + + N
Sbjct: 62 YDMDMYLYMSWQDDSMRHNETE-HVLVNDKDILDKIWLPDLYFANARTAYFHKVTVHNFN 120
Query: 62 IRIHPQGSVLY 72
+ I PQG++ Y
Sbjct: 121 MFISPQGTISY 131
Score = 79 (32.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 104 KFPTRSKRIDVISRITFPLVFALFNLTYW 132
KF ++ ID +R FP VFA+FN+ YW
Sbjct: 373 KFSRKALSIDKAARFAFPCVFAIFNVFYW 401
>UNIPROTKB|E2RSN3 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:HSDSKYH
EMBL:AAEX03003042 Ensembl:ENSCAFT00000027311 NextBio:20862356
Uniprot:E2RSN3
Length = 550
Score = 150 (57.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L+L S++W PD FF N K+ HN+ P
Sbjct: 93 EYTMDVFFRQTWTDERLKFG---GPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 149
Query: 59 NVYIRIHPQGSVLYSI 74
N RI G++LY++
Sbjct: 150 NKLFRIMQNGTILYTM 165
Score = 148 (57.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + + +T P +F + N T T+ LT++ CPM L +P+D +C LK SY
Sbjct: 136 RNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYA 195
Query: 164 WTTDDLIFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ WK+G V+V + + L ++ L K+NTG Y + V +R
Sbjct: 196 YPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQR 255
Query: 221 EFSYYLIQIY 230
+ Y++IQIY
Sbjct: 256 KMGYFMIQIY 265
Score = 76 (31.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 513 TSKIDQYSRILFPVAFAGFNLVYW 536
>MGI|MGI:95618 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 6" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022851 "GABA-gated chloride ion
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032809
"neuronal cell body membrane" evidence=ISO] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043235 "receptor complex" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 MGI:MGI:95618 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043083 GO:GO:0043235 GO:GO:0032809 GO:GO:0034707
GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH GO:GO:0022851 EMBL:X51986 EMBL:U77411
EMBL:U77409 EMBL:U77410 EMBL:AF256197 EMBL:AF256198 EMBL:AK135145
EMBL:AL645823 EMBL:BC145158 EMBL:BC145702 IPI:IPI00133501
IPI:IPI00648214 IPI:IPI00857474 IPI:IPI01008575 PIR:S11396
RefSeq:NP_001093111.1 RefSeq:NP_032094.2 UniGene:Mm.4915
ProteinModelPortal:P16305 SMR:P16305 STRING:P16305
PhosphoSite:P16305 PRIDE:P16305 Ensembl:ENSMUST00000020703
Ensembl:ENSMUST00000109286 Ensembl:ENSMUST00000155218 GeneID:14399
KEGG:mmu:14399 InParanoid:Q5SUU5 BindingDB:P16305 ChEMBL:CHEMBL4710
NextBio:285939 Bgee:P16305 Genevestigator:P16305
GermOnline:ENSMUSG00000020428 Uniprot:P16305
Length = 453
Score = 149 (57.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + + +T P +F L N T T+ LT++ CPM L +P+D +C LK SY
Sbjct: 119 RNGKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYA 178
Query: 164 WTTDDLIFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ WK+G V+V + + L ++ L K+NTG Y + V +R
Sbjct: 179 YPKTEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQR 238
Query: 221 EFSYYLIQIY 230
+ Y++IQIY
Sbjct: 239 KMGYFMIQIY 248
Score = 148 (57.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L+L S++W PD FF N K+ HN+ P
Sbjct: 76 EYTMDVFFRQTWTDERLKFK---GPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 59 NVYIRIHPQGSVLYSI 74
N R+ G++LY++
Sbjct: 133 NKLFRLMQNGTILYTM 148
Score = 76 (31.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYW 437
>UNIPROTKB|Q90845 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4MPHQ4 EMBL:X94343 IPI:IPI00571969
RefSeq:NP_990389.1 UniGene:Gga.550 ProteinModelPortal:Q90845
SMR:Q90845 Ensembl:ENSGALT00000002601 GeneID:395931 KEGG:gga:395931
CTD:2559 InParanoid:Q90845 OMA:HSDSKYH NextBio:20815996
Uniprot:Q90845
Length = 465
Score = 148 (57.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L L S++W PD FF N K+ HN+ P
Sbjct: 76 EYTMDVFFRQTWTDERLKFG---GPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 59 NVYIRIHPQGSVLYSI 74
N RI G++LY++
Sbjct: 133 NKLFRIMQNGTILYTM 148
Score = 148 (57.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + + +T P +F + N T T+ LT++ CPM L +P+D +C LK SY
Sbjct: 119 RNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYA 178
Query: 164 WTTDDLIFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ WK+G V+V + + L ++ L K+NTG Y + V +R
Sbjct: 179 YPKSEIIYTWKKGPLHSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQR 238
Query: 221 EFSYYLIQIY 230
+ Y++IQIY
Sbjct: 239 KMGYFMIQIY 248
Score = 76 (31.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 416 TSKIDQYSRILFPVAFAGFNLVYW 439
>UNIPROTKB|P22300 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR005437
InterPro:IPR005439 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 OrthoDB:EOG44BB25 EMBL:M55563
IPI:IPI00687809 IPI:IPI00690304 PIR:B39272 RefSeq:NP_776970.1
UniGene:Bt.408 ProteinModelPortal:P22300 SMR:P22300 STRING:P22300
PRIDE:P22300 GeneID:282240 KEGG:bta:282240 CTD:2566
InParanoid:P22300 BindingDB:P22300 ChEMBL:CHEMBL5138
NextBio:20806059 Uniprot:P22300
Length = 475
Score = 149 (57.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + F + W D RLK+N IK L L ++W+PD FF N K+ H I P
Sbjct: 110 EYTIDIFFGQTWYDRRLKFNS---TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTP 166
Query: 59 NVYIRIHPQGSVLYSIS-DLDNMRQCEVH 86
N +RI G VLY++ +D Q ++H
Sbjct: 167 NRMLRIWNDGRVLYTLRLTIDAECQLQLH 195
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/136 (25%), Positives = 62/136 (45%)
Query: 101 WLAK-FPTRSKRIDVISRITFP-LVFALFN---LTYWSTISLTLSCPMNLKLYPLDRQSC 155
W+ F SK+ D IT P + ++N + Y +++ C + L +P+D SC
Sbjct: 146 WIPDTFFRNSKKADA-HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSC 204
Query: 156 SLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPRFTLEKFYTDYCNSKTNTGAYSCLKV 214
L+ +SYG+ +++++ WK V ++ L +F+ KT +G Y + V
Sbjct: 205 PLEFSSYGYPREEIVYQWKRSSVEVSDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTV 264
Query: 215 DLLFKREFSYYLIQIY 230
R Y+ IQ Y
Sbjct: 265 YFDLSRRMGYFTIQTY 280
Score = 75 (31.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 98 CRS--WL-AKFPTRSKRIDVISRITFPLVFALFNLTYW 132
CR+ W + R ++D +RI FP F LFNL YW
Sbjct: 432 CRTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYW 469
>RGD|61861 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor, alpha 6"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005237 "inhibitory
extracellular ligand-gated ion channel activity" evidence=IMP]
[GO:0005254 "chloride channel activity" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032809 "neuronal cell body
membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0051291 "protein
heterooligomerization" evidence=IPI] [GO:0051932 "synaptic
transmission, GABAergic" evidence=IMP] [GO:0008503 "benzodiazepine
receptor activity" evidence=IMP] [GO:0022851 "GABA-gated chloride
ion channel activity" evidence=IMP] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0051291 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0042734 GO:GO:0043235 GO:GO:0032809
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559
EMBL:L08495 EMBL:X55742 IPI:IPI00206049 PIR:S11087
RefSeq:NP_068613.1 UniGene:Rn.29890 ProteinModelPortal:P30191
SMR:P30191 STRING:P30191 GeneID:29708 KEGG:rno:29708 UCSC:RGD:61861
BindingDB:P30191 ChEMBL:CHEMBL293 NextBio:610131 ArrayExpress:P30191
Genevestigator:P30191 GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 150 (57.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + + +T P +F L N T T+ LT++ CPM L +P+D +C LK SY
Sbjct: 119 RNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYA 178
Query: 164 WTTDDLIFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ WK+G V+V + + L ++ L K+NTG Y + V +R
Sbjct: 179 YPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQR 238
Query: 221 EFSYYLIQIY 230
+ Y++IQIY
Sbjct: 239 KMGYFMIQIY 248
Score = 147 (56.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L+L S++W PD FF N K+ HN+ P
Sbjct: 76 EYTMDVFFRQTWTDERLKFK---GPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 59 NVYIRIHPQGSVLYSI 74
N R+ G++LY++
Sbjct: 133 NKLFRLMHNGTILYTM 148
Score = 76 (31.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYW 437
>UNIPROTKB|P30191 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 RGD:61861 GO:GO:0051291 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
GO:GO:0051932 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559 EMBL:L08495 EMBL:X55742
IPI:IPI00206049 PIR:S11087 RefSeq:NP_068613.1 UniGene:Rn.29890
ProteinModelPortal:P30191 SMR:P30191 STRING:P30191 GeneID:29708
KEGG:rno:29708 UCSC:RGD:61861 BindingDB:P30191 ChEMBL:CHEMBL293
NextBio:610131 ArrayExpress:P30191 Genevestigator:P30191
GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 150 (57.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 108 RSKRIDVISRITFP-LVFALF-NLTYWSTISLTLS--CPMNLKLYPLDRQSCSLKMASYG 163
R+ + + +T P +F L N T T+ LT++ CPM L +P+D +C LK SY
Sbjct: 119 RNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYA 178
Query: 164 WTTDDLIFLWKEGD--PVQVVK-NLHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKR 220
+ ++I+ WK+G V+V + + L ++ L K+NTG Y + V +R
Sbjct: 179 YPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQR 238
Query: 221 EFSYYLIQIY 230
+ Y++IQIY
Sbjct: 239 KMGYFMIQIY 248
Score = 147 (56.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR+ W DERLK+ G + L+L S++W PD FF N K+ HN+ P
Sbjct: 76 EYTMDVFFRQTWTDERLKFK---GPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 59 NVYIRIHPQGSVLYSI 74
N R+ G++LY++
Sbjct: 133 NKLFRLMHNGTILYTM 148
Score = 76 (31.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 109 SKRIDVISRITFPLVFALFNLTYW 132
+ +ID SRI FP+ FA FNL YW
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYW 437
>WB|WBGene00001373 [details] [associations]
symbol:exp-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0030421 "defecation" evidence=IMP] [GO:0045933 "positive
regulation of muscle contraction" evidence=IMP] [GO:0006814 "sodium
ion transport" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:0016917 "GABA receptor activity" evidence=IDA] [GO:0005231
"excitatory extracellular ligand-gated ion channel activity"
evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0009792
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0031594 GO:GO:0006813
GO:GO:0006814 GO:GO:0030421 GO:GO:0045933
GeneTree:ENSGT00540000070314 GO:GO:0016917 EMBL:AY383563
EMBL:FO081349 PIR:T33513 RefSeq:NP_495229.3
ProteinModelPortal:G5ECJ0 SMR:G5ECJ0 EnsemblMetazoa:H35N03.1
GeneID:186801 KEGG:cel:CELE_H35N03.1 CTD:186801 WormBase:H35N03.1
OMA:WMETETE NextBio:933050 GO:GO:0005231 Uniprot:G5ECJ0
Length = 539
Score = 174 (66.3 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/102 (35%), Positives = 55/102 (53%)
Query: 129 LTYWSTISLTLSCPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQV-VKNLHL 187
L Y ISL C M+L L+P D+Q C L + SYG+T D +++ W +G + +K + L
Sbjct: 219 LLYSRRISLVCECTMDLTLFPFDKQLCKLGIESYGYTADHVVYKWSKGARTALELKKIRL 278
Query: 188 PRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQI 229
P FT+++ Y TG YS L V +F R + +Q+
Sbjct: 279 PDFTIQEAYVTSQMESYATGNYSRLYVCFVFSRSSGFCFLQL 320
>WB|WBGene00020767 [details] [associations]
symbol:lgc-40 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 HSSP:P23415
HOGENOM:HOG000231336 KO:K05397 EMBL:FO081414 PIR:T16935
RefSeq:NP_508428.2 ProteinModelPortal:Q22741 SMR:Q22741
IntAct:Q22741 MINT:MINT-214095 TCDB:1.A.9.6.4 PaxDb:Q22741
EnsemblMetazoa:T24D8.1 GeneID:188854 KEGG:cel:CELE_T24D8.1
UCSC:T24D8.1 CTD:188854 WormBase:T24D8.1 eggNOG:NOG328391
InParanoid:Q22741 OMA:VISWFNF NextBio:940332 Uniprot:Q22741
Length = 494
Score = 173 (66.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 43/128 (33%), Positives = 66/128 (51%)
Query: 108 RSKRIDVISRITFPLVFALFNLTYW--STISLTLSCPMNLKLYPLDRQSCSLKMASYGWT 165
RS I+ F LV+ N W + IS+ SC M+L YPLD Q C+L++ SY +
Sbjct: 124 RSAAFQDITDDNF-LVWVYPNGRVWYDARISIVSSCNMDLWKYPLDSQECALRILSYAYP 182
Query: 166 TDDLIFLWKEGDPVQVV-KN--LHLPRFTLEKFYTDYCNSKTNTGAYSCLKVDLLFKREF 222
L LW E + V + +N + +P +L+ T YCN TG +SC+ +RE
Sbjct: 183 MTVLRLLWSEKEDVPAIDRNPDITMPDMSLKHIRTGYCNGTYATGEWSCMTAIFYVEREM 242
Query: 223 SYYLIQIY 230
++++Q Y
Sbjct: 243 MHHVMQTY 250
Score = 118 (46.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNV 60
+Y + + F+E+W D RL +N I LT +W PD++F+N + F +I N
Sbjct: 78 DYHLDVYFQEEWYDHRLAHNA-SAPILVRDLTVFKMMWHPDVYFANARSAAFQDITDDNF 136
Query: 61 YIRIHPQGSVLY 72
+ ++P G V Y
Sbjct: 137 LVWVYPNGRVWY 148
Score = 82 (33.9 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 109 SKRIDVISRITFPLVFALFNLTYWS 133
++RID RI FP++F LFN+ YWS
Sbjct: 464 AQRIDERCRIVFPMIFLLFNVAYWS 488
>UNIPROTKB|D6RBK9 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] InterPro:IPR001390
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 PRINTS:PR00252
PRINTS:PR01079 GO:GO:0016021 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF63712 GO:GO:0030424
HGNC:HGNC:4076 ChiTaRS:GABRA2 EMBL:AC084352 EMBL:AC093745
EMBL:AC095060 EMBL:AC104072 HOGENOM:HOG000206334 IPI:IPI00967696
ProteinModelPortal:D6RBK9 SMR:D6RBK9 Ensembl:ENST00000510233
BindingDB:D6RBK9 ArrayExpress:D6RBK9 Bgee:D6RBK9 Uniprot:D6RBK9
Length = 159
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 1 EYSVQLTFREQWLDERLKYNDYDGRIKYLTLTE--ASRVWMPDLFFSNEKEGHFHNIIMP 58
EY++ + FR++W DERLK+ G + L L AS++W PD FF N K+ HN+ MP
Sbjct: 86 EYTIDVFFRQKWKDERLKFK---GPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 59 NVYIRIHPQGSVLYSI 74
N +RI G++LY++
Sbjct: 143 NKLLRIQDDGTLLYTM 158
>WB|WBGene00020605 [details] [associations]
symbol:lgc-50 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 EMBL:FO081094
PIR:T16909 RefSeq:NP_498637.3 ProteinModelPortal:P41849 SMR:P41849
PaxDb:P41849 GeneID:188633 KEGG:cel:CELE_T20B12.9 CTD:188633
WormBase:T20B12.9 eggNOG:NOG322447 HOGENOM:HOG000016259
InParanoid:P41849 OMA:SPSENTF NextBio:939524 Uniprot:P41849
Length = 491
Score = 172 (65.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 42/156 (26%), Positives = 75/156 (48%)
Query: 79 NMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVI-SRITFPLVFALFNLTYWSTISL 137
++ C ++T+ RK ++S I S TF +++ N WS L
Sbjct: 94 HLNVCATNITLKSDFRKKIWTPDTCIINSKSSSIHSSPSENTFVILYE--NGLVWSNFRL 151
Query: 138 TLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEKF 195
+ C +NLK++P D SC + + SY + TD++ +W + P+ +++ + LP F L +
Sbjct: 152 NVKTPCSVNLKMFPFDSLSCEIVLESYSFNTDEVRLMWHDV-PITMMEKVELPDFDLIGW 210
Query: 196 YTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
TD+ + G + KV F R + +YL Q Y+
Sbjct: 211 STDHQRLEYPNGIWDRAKVKFTFARRYGFYLFQSYF 246
>UNIPROTKB|P41849 [details] [associations]
symbol:lgc-50 "Ligand-gated ion channel 50" species:6239
"Caenorhabditis elegans" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 EMBL:FO081094
PIR:T16909 RefSeq:NP_498637.3 ProteinModelPortal:P41849 SMR:P41849
PaxDb:P41849 GeneID:188633 KEGG:cel:CELE_T20B12.9 CTD:188633
WormBase:T20B12.9 eggNOG:NOG322447 HOGENOM:HOG000016259
InParanoid:P41849 OMA:SPSENTF NextBio:939524 Uniprot:P41849
Length = 491
Score = 172 (65.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 42/156 (26%), Positives = 75/156 (48%)
Query: 79 NMRQCEVHMTVPQTPRKNCCRSWLAKFPTRSKRIDVI-SRITFPLVFALFNLTYWSTISL 137
++ C ++T+ RK ++S I S TF +++ N WS L
Sbjct: 94 HLNVCATNITLKSDFRKKIWTPDTCIINSKSSSIHSSPSENTFVILYE--NGLVWSNFRL 151
Query: 138 TLS--CPMNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGDPVQVVKNLHLPRFTLEKF 195
+ C +NLK++P D SC + + SY + TD++ +W + P+ +++ + LP F L +
Sbjct: 152 NVKTPCSVNLKMFPFDSLSCEIVLESYSFNTDEVRLMWHDV-PITMMEKVELPDFDLIGW 210
Query: 196 YTDYCNSKTNTGAYSCLKVDLLFKREFSYYLIQIYY 231
TD+ + G + KV F R + +YL Q Y+
Sbjct: 211 STDHQRLEYPNGIWDRAKVKFTFARRYGFYLFQSYF 246
>UNIPROTKB|B7Z279 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00253 PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 OrthoDB:EOG45756F
UniGene:Hs.303527 HGNC:HGNC:4082 EMBL:AC008712 EMBL:AC022120
EMBL:AC091882 EMBL:AC091989 EMBL:AK294437 IPI:IPI00975760
SMR:B7Z279 STRING:B7Z279 Ensembl:ENST00000517547 UCSC:uc011deh.1
Uniprot:B7Z279
Length = 314
Score = 169 (64.5 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 143 MNLKLYPLDRQSCSLKMASYGWTTDDLIFLWKEGD-PVQVVKNLHLPRFTLEKFYTDYCN 201
M+L+ YPLD Q+C+L++ SYG+TTDD+ F W+ D V V + LP+F++ +
Sbjct: 2 MDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKK 61
Query: 202 SKTNTGAYSCLKVDLLFKREFSYYLIQIY 230
+TG+Y L + KR Y+++Q Y
Sbjct: 62 VVFSTGSYPRLSLSFKLKRNIGYFILQTY 90
WARNING: HSPs involving 84 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.449 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 232 232 0.00085 113 3 11 22 0.49 32
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 334
No. of states in DFA: 616 (65 KB)
Total size of DFA: 222 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.99u 0.09s 21.08t Elapsed: 00:00:01
Total cpu time: 21.04u 0.09s 21.13t Elapsed: 00:00:01
Start: Thu Aug 15 13:31:39 2013 End: Thu Aug 15 13:31:40 2013
WARNINGS ISSUED: 2