Query psy1866
Match_columns 235
No_of_seqs 53 out of 55
Neff 2.7
Searched_HMMs 29240
Date Fri Aug 16 18:19:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1866.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1866hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yuf_A NGFI-A-binding protein 99.9 1.1E-22 3.9E-27 167.6 5.0 72 156-227 5-80 (142)
2 1ucv_A Ephrin type-A receptor 97.3 0.00068 2.3E-08 49.2 6.9 61 16-81 10-70 (81)
3 1v38_A SAM-domain protein sams 97.3 0.0007 2.4E-08 49.2 6.8 58 19-81 18-75 (78)
4 1b4f_A EPHB2; SAM domain, EPH 97.2 0.00085 2.9E-08 48.5 6.5 60 15-79 13-72 (82)
5 1x40_A ARAP2; ASAP-related pro 97.2 0.00068 2.3E-08 50.5 6.0 60 15-79 17-76 (91)
6 2dl0_A SAM and SH3 domain-cont 97.2 0.00038 1.3E-08 53.0 4.3 60 16-80 26-85 (97)
7 2k4p_A Phosphatidylinositol-3, 97.1 0.00083 2.8E-08 50.3 5.9 57 16-77 29-85 (86)
8 2kso_A Ephrin type-A receptor 97.1 0.00086 2.9E-08 49.2 5.7 62 13-79 16-77 (82)
9 2eao_A Ephrin type-B receptor 97.1 0.00089 3E-08 50.4 5.8 62 15-81 24-85 (99)
10 2e8n_A Ephrin type-A receptor 97.0 0.0012 4E-08 48.7 5.9 61 15-80 14-74 (88)
11 1b0x_A Protein (EPHA4 receptor 96.9 0.0022 7.4E-08 47.8 6.6 59 15-78 28-86 (94)
12 2kg5_A ARF-GAP, RHO-GAP domain 96.9 0.0025 8.4E-08 48.7 6.8 62 15-81 28-89 (100)
13 2eam_A Putative 47 kDa protein 96.9 0.00084 2.9E-08 48.4 3.8 62 16-82 15-78 (80)
14 2qkq_A Ephrin type-B receptor 96.8 0.002 6.9E-08 46.7 5.4 59 15-78 17-75 (83)
15 2lmr_A ODIN, ankyrin repeat an 96.6 0.002 7E-08 49.5 4.5 61 16-81 32-94 (101)
16 3h8m_A Ephrin type-A receptor 96.2 0.013 4.4E-07 44.0 6.5 58 16-78 28-85 (90)
17 3kka_C Ephrin type-A receptor 96.1 0.014 4.9E-07 43.4 6.3 58 16-78 24-81 (86)
18 3sei_A Caskin-1; SAM domain, p 95.9 0.018 6.2E-07 46.2 6.6 58 16-78 82-139 (149)
19 2kiv_A Ankyrin repeat and ster 95.7 0.0054 1.9E-07 48.7 2.7 57 16-76 91-147 (148)
20 3hil_A Ephrin type-A receptor 95.7 0.015 5.2E-07 42.9 4.9 55 17-76 27-81 (82)
21 2kiv_A Ankyrin repeat and ster 95.5 0.012 4E-07 46.8 4.2 59 16-79 17-77 (148)
22 2ke7_A Ankyrin repeat and ster 95.5 0.016 5.3E-07 43.9 4.6 57 17-78 26-84 (103)
23 3sei_A Caskin-1; SAM domain, p 95.3 0.026 9E-07 45.2 5.5 59 15-79 12-70 (149)
24 3bq7_A Diacylglycerol kinase d 95.2 0.058 2E-06 38.8 6.6 61 13-79 12-72 (81)
25 3k1r_B Usher syndrome type-1G 94.7 0.089 3.1E-06 37.9 6.4 57 16-79 5-61 (74)
26 2gle_A Neurabin-1; SAM domain, 93.3 0.12 3.9E-06 36.1 4.5 58 15-78 11-68 (74)
27 2f3n_A SH3 and multiple ankyri 93.2 0.18 6.3E-06 35.7 5.6 59 14-78 8-66 (76)
28 2ean_A Connector enhancer of k 92.5 0.29 1E-05 34.9 5.9 58 15-78 15-74 (83)
29 3bs7_A Protein aveugle; sterIl 92.1 0.59 2E-05 32.8 6.9 59 14-78 9-69 (78)
30 1v85_A Similar to ring finger 90.9 0.87 3E-05 33.4 7.0 65 13-82 22-89 (91)
31 1ow5_A Serine/threonine-protei 90.6 0.33 1.1E-05 37.2 4.6 59 15-78 17-75 (85)
32 3bs5_B Connector enhancer of k 90.4 1 3.4E-05 31.7 6.8 59 14-78 10-70 (80)
33 3tad_C Liprin-beta-1; protein 89.3 0.46 1.6E-05 42.2 5.2 60 15-79 22-81 (265)
34 3bs5_A Protein aveugle; sterIl 88.5 1.5 5.1E-05 33.3 6.9 57 15-77 30-88 (106)
35 2d8c_A Phosphatidylcholine:cer 83.0 0.47 1.6E-05 36.0 1.7 66 8-79 14-82 (97)
36 2dkz_A Hypothetical protein LO 83.0 0.63 2.1E-05 35.7 2.3 66 8-78 12-80 (84)
37 3tad_C Liprin-beta-1; protein 82.2 2.4 8.1E-05 37.6 6.0 59 15-79 94-152 (265)
38 2e8o_A SAM domain and HD domai 80.6 2.5 8.5E-05 31.6 4.9 61 12-78 31-93 (103)
39 4e9f_A Methyl-CPG-binding doma 78.9 1.8 6E-05 35.3 3.8 53 22-78 46-99 (161)
40 3tac_B Liprin-alpha-2; transfe 77.2 5.5 0.00019 36.8 6.9 59 15-78 43-103 (334)
41 2b6g_A VTS1P; alpha-helix, pen 75.3 4.4 0.00015 32.4 5.1 54 16-77 52-105 (119)
42 3n5n_X A/G-specific adenine DN 72.0 2.9 0.0001 37.0 3.7 52 24-79 66-117 (287)
43 1kw4_A Polyhomeotic; SAM domai 69.4 11 0.00036 27.8 5.7 63 11-79 17-80 (89)
44 1kg2_A A/G-specific adenine gl 68.1 5.7 0.0002 33.0 4.4 54 23-80 46-99 (225)
45 3fsp_A A/G-specific adenine gl 62.9 4.9 0.00017 35.5 3.2 53 23-79 55-107 (369)
46 1pu6_A 3-methyladenine DNA gly 62.4 6.9 0.00024 32.5 3.9 53 23-78 46-105 (218)
47 3tac_B Liprin-alpha-2; transfe 55.3 16 0.00055 33.7 5.3 56 17-77 167-222 (334)
48 2d3d_A VTS1 protein; RNA bindi 53.1 19 0.00066 27.3 4.6 54 16-77 21-74 (88)
49 1wwv_A Connector enhancer of k 51.9 8.3 0.00028 28.7 2.4 57 15-79 18-76 (91)
50 1kea_A Possible G-T mismatches 50.3 13 0.00045 30.8 3.6 52 23-75 51-103 (221)
51 1orn_A Endonuclease III; DNA r 45.5 17 0.00056 30.4 3.5 52 24-76 50-102 (226)
52 3skq_A Mitochondrial distribut 44.6 26 0.0009 31.1 4.8 62 13-79 119-180 (249)
53 2y9u_A Tumor protein 63; apopt 44.3 41 0.0014 24.0 5.0 53 19-77 10-62 (69)
54 1pk1_B Sex COMB on midleg CG94 41.0 93 0.0032 22.8 6.6 63 10-78 16-80 (89)
55 3d55_A Antitoxin, uncharacteri 39.5 18 0.00063 26.0 2.6 55 22-80 9-72 (91)
56 2es6_A VTS1P; SAM domain, prot 38.1 30 0.001 27.0 3.7 54 16-77 34-87 (101)
57 1wix_A HOOK homolog 1, RSGI RU 33.4 41 0.0014 27.2 4.0 53 24-77 80-143 (164)
58 1eyh_A Epsin; superhelix of he 32.2 41 0.0014 26.9 3.7 38 38-75 24-65 (144)
59 2ob9_A Tail assembly chaperone 31.9 23 0.00079 28.9 2.2 47 14-75 62-114 (130)
60 2bzw_B BCL2-antagonist of cell 31.6 9 0.00031 24.0 -0.2 10 225-234 6-15 (27)
61 1mhq_A ADP-ribosylation factor 30.6 1.2E+02 0.004 23.9 6.1 48 29-80 62-117 (148)
62 2y9t_A Tumor protein 63; apopt 29.5 54 0.0018 24.2 3.7 55 19-79 12-66 (82)
63 1oxj_A RNA-binding protein sma 28.6 36 0.0012 28.9 2.9 56 15-79 9-64 (173)
64 2zfy_A Ubiquitin thioesterase 26.6 7.7 0.00026 32.9 -1.5 39 28-67 152-196 (234)
65 4dhi_B Ubiquitin thioesterase 25.8 10 0.00036 33.9 -0.9 40 28-68 187-232 (284)
66 1inz_A EPS15-interacting porte 25.1 57 0.002 26.2 3.4 39 37-75 41-83 (148)
67 2dhy_A CUE domain-containing p 24.9 79 0.0027 22.6 3.8 38 171-208 20-62 (67)
68 3sks_A Putative oligoendopepti 24.7 1.5E+02 0.005 27.7 6.5 55 14-80 501-561 (567)
69 1dvp_A HRS, hepatocyte growth 24.5 89 0.003 25.6 4.5 52 26-80 63-116 (220)
70 3fse_A Two-domain protein cont 24.3 72 0.0025 28.8 4.3 46 26-82 226-271 (365)
71 2dal_A Protein KIAA0794; FAS a 24.0 41 0.0014 23.1 2.1 46 36-81 4-55 (62)
72 2h56_A DNA-3-methyladenine gly 23.8 73 0.0025 26.6 3.9 46 24-73 68-117 (233)
73 2abk_A Endonuclease III; DNA-r 23.6 41 0.0014 27.4 2.3 51 25-79 47-98 (211)
74 2a1j_A DNA repair endonuclease 23.5 1.7E+02 0.0057 19.8 5.1 31 39-75 26-56 (63)
75 1rh5_B Preprotein translocase 23.0 28 0.00096 25.6 1.1 28 38-65 3-30 (74)
76 3onk_A Epsin-3, ENT3; helix, p 22.7 52 0.0018 26.6 2.7 39 37-75 29-72 (150)
77 2wm9_A Dedicator of cytokinesi 22.5 1.1E+02 0.0038 27.8 5.2 53 23-77 349-415 (428)
78 2sas_A Sarcoplasmic calcium-bi 22.4 1.4E+02 0.0049 21.2 4.8 52 22-78 7-62 (185)
79 1d2z_B Death domain of tube; s 21.4 1.1E+02 0.0037 25.5 4.4 16 64-79 68-97 (153)
80 3ilh_A Two component response 20.7 54 0.0018 22.5 2.1 27 59-85 118-144 (146)
81 1ci4_A Protein (barrier-TO-aut 20.6 1.5E+02 0.0051 22.7 4.7 39 30-79 47-86 (89)
82 2ccm_A Calexcitin; EF hand, ca 20.2 1.9E+02 0.0066 21.0 5.2 53 21-78 10-66 (191)
No 1
>2yuf_A NGFI-A-binding protein 1; transcriptional repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.1e-22 Score=167.56 Aligned_cols=72 Identities=17% Similarity=0.258 Sum_probs=65.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhhCCCCCchhh----hhhhhhHHhHHHHhcCCcccchhhhhhccccchhhhhhh
Q psy1866 156 QLTPVLDDSQIAKLADIAQQLVRALPHLEPKAQ----NSKKKICKDLEAVFQMSDEAVILKVKDNVHDSNLERITN 227 (235)
Q Consensus 156 q~tp~L~~~qi~~v~ecaeRL~~tLPq~dp~~~----~~nKKlaK~lehIf~Mse~DP~re~e~~~~~~~~~~~~~ 227 (235)
..+++||++||++|+||||||+++||++||+++ ++|||+||+|+|||+|+++||+|++|||||+--.-|..-
T Consensus 5 ~~~e~L~~~~v~~v~e~~erl~~tlP~~dp~e~~~~l~~~Kkl~k~l~~i~~m~~~dp~r~~EiRKYSaIYGRFDs 80 (142)
T 2yuf_A 5 SSGEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDS 80 (142)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHCSHHHHHHTHHHHSCSSCHHHHHHHHHHCCSSSCSCC
T ss_pred CcccccCHHHHHHHHHHHHHHHhhCCCCCchHHHHHHHHhHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHccccc
Confidence 456799999999999999999999999999975 799999999999999999999999999999976555443
No 2
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=97.31 E-value=0.00068 Score=49.25 Aligned_cols=61 Identities=10% Similarity=0.144 Sum_probs=52.8
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcCC
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNP 81 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~p 81 (235)
+-..|..-+|-+|.+.|++.|=|+.+.|+.+.++|+.+ +|+. ++=|.+|+.+|+++.....
T Consensus 10 V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~lt~~DL~~----lGI~-~~GhrkkIl~ai~~l~~~~ 70 (81)
T 1ucv_A 10 VGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRA----LGIT-LMGHQKKILGSIQTMRAQL 70 (81)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCBHHHHTTCCHHHHHH----HTCC-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCChHHHHHHcCHHHHHh----CCCC-ChhHHHHHHHHHHHHHHHH
Confidence 45579999999999999999999999999999999876 5764 5789999999999876443
No 3
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=97.29 E-value=0.0007 Score=49.19 Aligned_cols=58 Identities=28% Similarity=0.427 Sum_probs=51.0
Q ss_pred HHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcCC
Q psy1866 19 VMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNP 81 (235)
Q Consensus 19 vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~p 81 (235)
.|...+|-+|.+.|++.|=||++.++...++++.+ +|+. +|=|-+|+.+|++.+....
T Consensus 18 WL~~i~L~~Y~~~F~~~gy~~~~~~~~lt~~DL~~----lGI~-~~ghrkkil~ai~~L~~~~ 75 (78)
T 1v38_A 18 FLERIHLQEYTSTLLLNGYETLDDLKDIKESHLIE----LNIA-DPEDRARLLSAAESLLSGP 75 (78)
T ss_dssp HHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHH----TTTC-CHHHHHHHHHHHHHHHSCC
T ss_pred HHHHCCCHHHHHHHHHcCCCCHHHHhhcCHHHHHH----cCCC-CHHHHHHHHHHHHHHHhcc
Confidence 69999999999999999999999999999999776 5764 5889999999999876543
No 4
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=97.21 E-value=0.00085 Score=48.50 Aligned_cols=60 Identities=13% Similarity=0.233 Sum_probs=52.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
.+...|+.-+|-+|.+.|++.|=||.+.|+...++++.+ +|+. ++-|-+|+.+|+++...
T Consensus 13 ~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~----lGI~-~~GhrkkIl~ai~~l~~ 72 (82)
T 1b4f_A 13 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILR----VGVT-LAGHQKKILNSIQVMRA 72 (82)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHH----TTCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhCCHHHHHH----cCCC-CHHHHHHHHHHHHHHHH
Confidence 455689999999999999999999999999999999875 6764 57899999999988753
No 5
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=97.19 E-value=0.00068 Score=50.53 Aligned_cols=60 Identities=20% Similarity=0.256 Sum_probs=51.7
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
.+...|..-+|-+|-+.|++.|=||++.|+...++|+.+ +|.. ++=|.+|+.+|++++..
T Consensus 17 ~V~~WL~~lgL~qY~~~F~~~g~~~~~~l~~lt~~DL~~----lGI~-~~GHrkkIl~ai~~L~~ 76 (91)
T 1x40_A 17 DIKDFLMSINLEQYLLHFHESGFTTVKDCAAINDSLLQK----IGIS-PTGHRRRILKQLQIILS 76 (91)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBSGGGGGCCHHHHHH----HTCC-CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhcCHHHHHH----CCCC-CHhHHHHHHHHHHHHHh
Confidence 355679999999999999999999999999999999776 4664 57899999999887763
No 6
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.15 E-value=0.00038 Score=52.99 Aligned_cols=60 Identities=20% Similarity=0.232 Sum_probs=52.7
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcC
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTN 80 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~ 80 (235)
+...|..-+|-+|.+.|++.|=|+++.|+...++|+.+| |+. ++=|.+|+.+++++....
T Consensus 26 V~eWL~~igL~qY~~~F~~~g~d~le~l~~lt~~DL~~l----GIt-~~gHrkkIl~ai~~lr~~ 85 (97)
T 2dl0_A 26 VSDWLISIGLPMYAGTLSTAGFSTLSQVPSLSHTCLQEA----GIT-EERHIRKLLSAARLFKLP 85 (97)
T ss_dssp HHHHHHHHTCGGGHHHHHHHTCCSTTSGGGCCHHHHHHH----TCC-CHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCcHHHHHhcCHHHHHHC----CCC-CHHHHHHHHHHHHHHHcc
Confidence 556899999999999999999999999999999998765 664 588999999999987644
No 7
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=97.12 E-value=0.00083 Score=50.28 Aligned_cols=57 Identities=30% Similarity=0.403 Sum_probs=49.2
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEW 77 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w 77 (235)
+...|..-+|-+|-+.|++.|=||+++|++..++|+.+ +|.. ++=|-+|+.+|+++.
T Consensus 29 V~eWL~~lgL~qY~~~F~~~g~~~le~l~~lt~~DL~~----lGIt-~~GHRkkIL~aI~~L 85 (86)
T 2k4p_A 29 MSAWLRAIGLERYEEGLVHNGWDDLEFLSDITEEDLEE----AGVQ-DPAHKRLLLDTLQLS 85 (86)
T ss_dssp SHHHHHTTTCGGGHHHHHTTTCCCHHHHTTCCHHHHHH----TTCC-CHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHH----CCCC-CHHHHHHHHHHHHHc
Confidence 33459999999999999999999999999999999875 5654 688999999999863
No 8
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=97.10 E-value=0.00086 Score=49.25 Aligned_cols=62 Identities=11% Similarity=0.327 Sum_probs=52.0
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 13 ELQLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 13 elqly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
--++...|..-+|-+|.+.|++.|=|+.++|+.+.++|+.+ +|+ +++-|.+|+.+|++....
T Consensus 16 ~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~lt~~DL~~----lGI-~~~GhRkkIl~ai~~Lr~ 77 (82)
T 2kso_A 16 HMTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKR----IGV-RLPGHQKRIAYSLLGLKD 77 (82)
T ss_dssp --CHHHHHHHTTCTTHHHHHHHTTCCSHHHHTTCCHHHHHH----HHC-CCTTHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHH----CCC-CChhHHHHHHHHHHHHHH
Confidence 33566789999999999999999999999999999999865 465 457899999999987653
No 9
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.09 E-value=0.00089 Score=50.39 Aligned_cols=62 Identities=15% Similarity=0.320 Sum_probs=54.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcCC
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNP 81 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~p 81 (235)
.+...|+.-+|-+|.+.|++.|=||.+.|+...++++.+ +|+. ++=|-+|+.+|++++....
T Consensus 24 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~L~~lt~~DL~~----lGI~-~~GhRkkIl~ai~~l~~~~ 85 (99)
T 2eao_A 24 TVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLR----IGIT-LAGHQKKILNSIHSMRVQI 85 (99)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHH----HTCC-CHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCChHHHHhhCCHHHHHH----CCCC-ChhHHHHHHHHHHHHHHHh
Confidence 566789999999999999999999999999999999876 5764 5789999999999987554
No 10
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.03 E-value=0.0012 Score=48.70 Aligned_cols=61 Identities=11% Similarity=0.311 Sum_probs=52.9
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcC
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTN 80 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~ 80 (235)
.+...|+.-+|-+|.+.|++.|=|++++|+...++++.+ +|+. ++=|-+|+.+|+++....
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~----lGI~-~~GhRkkIl~ai~~l~~~ 74 (88)
T 2e8n_A 14 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDVKR----IGVR-LPGHQKRIAYSLLGLKDQ 74 (88)
T ss_dssp SHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTSCTTHHHH----TTCC-SHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHH----CCCC-ChhHHHHHHHHHHHHHHh
Confidence 456689999999999999999999999999999999765 5754 578999999999988754
No 11
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=96.93 E-value=0.0022 Score=47.84 Aligned_cols=59 Identities=12% Similarity=0.268 Sum_probs=50.9
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
.+...|..-+|-+|.+.|++.|=||+++|+...++++.+ +|+ .++=|-+|+.+|+++..
T Consensus 28 ~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~lt~~DL~~----lGI-~~~GhrkkIl~ai~~L~ 86 (94)
T 1b0x_A 28 SVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHMSQDDLAR----IGI-TAITHQNKILSSVQAMR 86 (94)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHH----HTC-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhCCHHHHHH----CCC-CChhHHHHHHHHHHHHH
Confidence 455689999999999999999999999999999999765 575 45789999999988764
No 12
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}
Probab=96.89 E-value=0.0025 Score=48.71 Aligned_cols=62 Identities=23% Similarity=0.264 Sum_probs=54.1
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcCC
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNP 81 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~p 81 (235)
++...|...+|-+|.+.|++.|=|+.+.|+.+.++++.+ +|+. ++=|-+|+.+|++.....+
T Consensus 28 ~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~Lt~eDLke----LGIt-~~GhRkkIL~aI~~Lr~~~ 89 (100)
T 2kg5_A 28 DIAVWLATVHLEQYADTFRRHGLATAGAARGLGHEELKQ----LGIS-ATGHRKRILRLLQTGTEEG 89 (100)
T ss_dssp BHHHHHGGGTCGGGHHHHHHTTCCBHHHHTTCCHHHHHH----HTCC-CHHHHHHHHHHHTTTTTCC
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhcCHHHHHH----CCCC-ChhHHHHHHHHHHHHHhcc
Confidence 567789999999999999999999999999999999776 5765 5789999999999876543
No 13
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.87 E-value=0.00084 Score=48.43 Aligned_cols=62 Identities=24% Similarity=0.408 Sum_probs=53.4
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHH--HhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcCCC
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQL--CEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNPA 82 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql--~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~p~ 82 (235)
+...|+.-+|-+|.+.|++.|=|+.+.| +...++++.+ +|+. ++-|-+|+.+|++++...|.
T Consensus 15 V~~WL~~lgL~~Y~~~F~~~~i~~~~~l~~~~lt~~dL~~----lGI~-~~ghR~kIl~ai~~L~~~~~ 78 (80)
T 2eam_A 15 VGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLE----IGIL-NSGHRQRILQAIQLLPSGPS 78 (80)
T ss_dssp HHHHHHHHTCGGGHHHHHHTTCCCTTTSSSSSSCTTHHHH----SSCC-CHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHHHH----CCCC-CHHHHHHHHHHHHHHhcCCC
Confidence 4457999999999999999999999999 7999999776 5765 58899999999999877664
No 14
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=96.81 E-value=0.002 Score=46.72 Aligned_cols=59 Identities=12% Similarity=0.259 Sum_probs=51.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
.+...|+.-+|-+|.+.|++.|=+|.++|+...++++.+ +|+. ++-|-+|+.+|+++..
T Consensus 17 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~----lGI~-~~GhrkkIl~ai~~l~ 75 (83)
T 2qkq_A 17 SVGEWLRAIKMGRYEESFAAAGFGSFELVSQISAEDLLR----IGVT-LAGHQKKILASVQHMK 75 (83)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHH----HTCC-CHHHHHHHHHHHTTC-
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhCCHHHHHH----CCCC-CHHHHHHHHHHHHHHH
Confidence 456689999999999999999889999999999999877 5874 5889999999988754
No 15
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens}
Probab=96.62 E-value=0.002 Score=49.52 Aligned_cols=61 Identities=26% Similarity=0.367 Sum_probs=51.6
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHH--hhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcCC
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLC--EAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNP 81 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~--~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~p 81 (235)
+...|..-+|-+|.+.|++.|=|+++.|+ ...++++.+ +|.. ++=|-+|+.+|++.+...+
T Consensus 32 V~eWL~~LgL~qY~~~F~~~g~d~~e~l~~~~Lt~eDL~e----LGIt-~~GHRkkIL~aI~~L~~~~ 94 (101)
T 2lmr_A 32 VGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRD----IGIS-DPQHRRKLLQAARSLPKVK 94 (101)
T ss_dssp HHHHHHHHTCGGGHHHHHHTTCCCTTSTTTSCCCHHHHHH----HTCC-CHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHHHH----CCCC-CHHHHHHHHHHHHHHHhcc
Confidence 34459999999999999999999999998 799998655 5764 6889999999999876554
No 16
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=96.16 E-value=0.013 Score=43.97 Aligned_cols=58 Identities=14% Similarity=0.272 Sum_probs=50.3
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
+...|..-+|-+|.+.|.+.|=|++++|....++|+.+ +|.. +|=|-+|+-+|++++.
T Consensus 28 V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL~~----lGIt-~~GHRkkIL~ai~~Lr 85 (90)
T 3h8m_A 28 VGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMS----LGIT-LVGHQKKIMSSIQTMR 85 (90)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHH----TTCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCChHHHHHHHHHcCCChHHHHhhCCHHHHHH----CCCC-CHHHHHHHHHHHHHHH
Confidence 44567888999999999999999999999999999765 4764 5789999999999874
No 17
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=96.07 E-value=0.014 Score=43.39 Aligned_cols=58 Identities=12% Similarity=0.331 Sum_probs=50.5
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
+...|..-+|-+|.+.|.+.|=|++++|....++++.+ +|. .+|=|-+|+-+|+++..
T Consensus 24 V~~WL~~lgL~qY~~~F~~~g~d~le~l~~lt~~DL~~----LGI-t~~GHRkkIL~ai~~Lr 81 (86)
T 3kka_C 24 VSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKR----IGV-RLPGHQKRIAYSLLGLK 81 (86)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHH----TTC-CCHHHHHHHHHHHHHCC
T ss_pred HHHHHHhCCcHHHHHHHHHcCCChHHHHHhCCHHHHHH----CCC-CCHHHHHHHHHHHHHHH
Confidence 44567888999999999999999999999999998875 576 56889999999999864
No 18
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=95.89 E-value=0.018 Score=46.16 Aligned_cols=58 Identities=22% Similarity=0.397 Sum_probs=49.4
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
+-..|+.-+|-+|.+.|.+.|=|+.+.|....++++.+ +|+ +++-|.+|+.+|++.+.
T Consensus 82 v~~WL~~igL~qY~~~F~~~g~d~~~~l~~lt~~dL~~----lGI-~~~gHr~kIl~ai~~l~ 139 (149)
T 3sei_A 82 LAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQE----IGI-TKLGHQKKLMLAVRKLA 139 (149)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHH----HTC-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCchhhHHHHHHCCCchHHHHhhCCHHHHHH----CCC-CCHHHHHHHHHHHHHHH
Confidence 34458888999999999999999999999999988754 576 46899999999998764
No 19
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=95.68 E-value=0.0054 Score=48.74 Aligned_cols=57 Identities=18% Similarity=0.223 Sum_probs=48.2
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQE 76 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~ 76 (235)
+...|..-+|-+|.+.|.+.|=|+++.|+...++++ +.-+|+. |+-|.+|+.+|+++
T Consensus 91 v~~WL~~i~L~qY~~~F~~~g~~~~~~l~~lt~~dL---l~~lGI~-~~gHrkrIl~ai~~ 147 (148)
T 2kiv_A 91 VAEWLDSIELGDYTKAFLINGYTSMDLLKKIAEVEL---INVLKIN-LIGHRKRILASLGD 147 (148)
T ss_dssp HHHHHHTTTCCTHHHHHHHHTCCSHHHHTSCCHHHH---HHHTCCC-CHHHHHHHHHHHTC
T ss_pred HHHHHHHCCcHHHHHHHHHcCCChHHHHHhCCHHHH---HHhCCCC-ChhHHHHHHHHHhh
Confidence 445799999999999999999999999999998775 3446764 68899999999864
No 20
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=95.66 E-value=0.015 Score=42.91 Aligned_cols=55 Identities=18% Similarity=0.294 Sum_probs=47.8
Q ss_pred HHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q psy1866 17 YRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQE 76 (235)
Q Consensus 17 y~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~ 76 (235)
-..|+.-+|-+|.+.|.+.|=|++++|....++|+.+ +|.. +|=|-+|+-+|+++
T Consensus 27 ~~WL~~lgL~qY~~~F~~~g~~s~e~l~~lt~~DL~~----lGIt-~~GHRkkIL~aiq~ 81 (82)
T 3hil_A 27 SEWLESIRMKRYILHFHSAGLDTMECVLELTAEDLTQ----MGIT-LPGHQKRILCSIQG 81 (82)
T ss_dssp HHHHHHTTCGGGHHHHHHTTCCSGGGGTTCCHHHHHH----TTCC-CHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHcCCChHHHHhcCCHHHHHH----CCCC-CHHHHHHHHHHHHh
Confidence 3457888999999999999999999999999999865 4764 58899999999986
No 21
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=95.54 E-value=0.012 Score=46.80 Aligned_cols=59 Identities=22% Similarity=0.345 Sum_probs=50.6
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHH--hhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLC--EAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~--~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
+...|..-+|-+|-+.|++.|=|+...++ ...++|+. -+|+. +|.|-+||.+|++....
T Consensus 17 V~~WL~~igL~~Y~~~F~~~g~d~~~~l~~~~lt~~DL~----~lGI~-~~ghRkkil~ai~~L~~ 77 (148)
T 2kiv_A 17 VGQWLESIGLPQYENHLMANGFDNVQAMGSNVMEDQDLL----EIGIL-NSGHRQRILQAIQLLPK 77 (148)
T ss_dssp HHHHHHHHSCTTSHHHHHHTTTTBGGGGTSSCCCHHHHH----HHCCS-STTSHHHHHHHHHHCSC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCHHHHhhhccCCHHHHH----HCCCC-CHHHHHHHHHHHHHHHH
Confidence 45579999999999999999999999998 88888875 46875 58999999999998743
No 22
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=95.49 E-value=0.016 Score=43.92 Aligned_cols=57 Identities=25% Similarity=0.371 Sum_probs=49.9
Q ss_pred HHHHHhhhhHHHHHHHHHcCCchHHHH--HhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 17 YRVMQRASLLAYYDTLLEMGGDDVQQL--CEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 17 y~vlqrAnLl~Yyd~~i~~GgDdvqql--~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
...|+.-+|-+|-+.|++.|=|+...| +...++++.+ +|+. ++-|-+|+.+|++...
T Consensus 26 ~~WL~~igL~qY~~~F~~~gid~~~~l~~~~lt~~DL~~----lGI~-~~GhRkkIl~ai~~L~ 84 (103)
T 2ke7_A 26 GQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLE----IGIL-NSGHRQRILQAIQLLP 84 (103)
T ss_dssp THHHHHTTCTTCHHHHHHTTCCCHHHHHTTCCCHHHHHH----HTCC-CHHHHHHHHHHHHHSC
T ss_pred HHHHHHCCCHHHHHHHHHcCCCcHHHHhcccCCHHHHhH----CCCC-CHHHHHHHHHHHHHHH
Confidence 347999999999999999999999999 7999999776 5764 5889999999999974
No 23
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=95.29 E-value=0.026 Score=45.20 Aligned_cols=59 Identities=15% Similarity=0.327 Sum_probs=51.5
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
++...|+.-+|-+|-+.|.+.|=| .++|....++|+. -+|+. +|.|-+|+.+|++++..
T Consensus 12 ~V~~WL~~lgL~~Y~~~F~~~g~d-~~~l~~lt~~DL~----~lGIt-~~gHrkkil~ai~~L~~ 70 (149)
T 3sei_A 12 AVSQWLTAFQLQLYAPNFISAGYD-LPTISRMTPEDLT----AIGVT-KPGHRKKIAAEISGLSI 70 (149)
T ss_dssp HHHHHHHTTTCGGGHHHHHHTTCC-HHHHTTCCHHHHH----HTTCC-SHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCC-HHHHccCCHHHHH----HcCCC-CHHHHHHHHHHHHHHHh
Confidence 566778999999999999999988 9999999999986 46885 59999999999998743
No 24
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=95.22 E-value=0.058 Score=38.80 Aligned_cols=61 Identities=16% Similarity=0.241 Sum_probs=50.7
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 13 ELQLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 13 elqly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
.-++...|+..+|-+|-+.|.+.|=|... |+.+.++++.+ +|+. ++-|.+|+.+|+++...
T Consensus 12 ~~~V~~WL~~lgl~~Y~~~F~~~~idg~~-Ll~Lt~~dL~~----lGI~-~~ghr~kIl~aI~~L~~ 72 (81)
T 3bq7_A 12 TEEVAAWLEHLSLCEYKDIFTRHDIRGSG-LLHLERRDLKD----LGVT-KVGHMKRILCGIKELSR 72 (81)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHHTTCCHHH-HTTCCHHHHHH----TTCC-CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHcCCCHHH-HCcCCHHHHhH----cCCC-CHHHHHHHHHHHHHHHH
Confidence 34677789999999999999998877655 99999999765 6764 68899999999998754
No 25
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}
Probab=94.69 E-value=0.089 Score=37.90 Aligned_cols=57 Identities=9% Similarity=0.088 Sum_probs=48.9
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
+...|+.-+|-+|.+.|.+.| =|.+.|..+.++++.+ +|+. +=|-+|+-+|++++..
T Consensus 5 v~~wL~~lgL~~Y~~~F~~~~-id~e~l~~lt~~DL~~----lGI~--~G~RkkIl~ai~~~~~ 61 (74)
T 3k1r_B 5 LETFLASLHMEDFAALLRQEK-IDLEALMLCSDLDLRS----ISVP--LGPREKILGAVRRRRQ 61 (74)
T ss_dssp HHHHHHTTTCGGGHHHHHHTT-CCHHHHTTCCHHHHHH----TTCC--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcC-cCHHHHhHCCHHHHHH----cCCC--cchHHHHHHHHHHHHH
Confidence 456789999999999999876 5799999999999664 5776 8899999999999875
No 26
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=93.26 E-value=0.12 Score=36.14 Aligned_cols=58 Identities=19% Similarity=0.203 Sum_probs=46.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
++...|+..+|-+|-+.|.+++=|- +.|+.+.++++.+ +|+. ++-|-+++.+|+++..
T Consensus 11 ~V~~WL~~~gl~~y~~~F~~~~i~g-~~Ll~l~~~dL~~----lGI~-~~g~r~kil~~i~~L~ 68 (74)
T 2gle_A 11 QVSHWLVGLSLDQYVSEFSAQNISG-EQLLQLDGNKLKA----LGMT-SSQDRALVKKKLKEMK 68 (74)
T ss_dssp GGHHHHHHTTTHHHHHHHTTTTCCH-HHHHTCCHHHHHT----TTCC-CHHHHHHHHHHHHSHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCH-HHHhhCCHHHHHH----cCCC-CHHHHHHHHHHHHHHH
Confidence 4566788899999999999986544 8999999998543 6764 4789999999988653
No 27
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=93.20 E-value=0.18 Score=35.74 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=47.8
Q ss_pred HHHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 14 LQLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 14 lqly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
-++...|+..+|-+|-+.|.+.|=|-. .|+.+.++++. -+|+ +++-|-+|+.+|+++..
T Consensus 8 ~~V~~WL~~lgl~~Y~~~F~~~~idg~-~Ll~Lt~~dL~----~lGI-~~~Ghr~kIl~aI~~l~ 66 (76)
T 2f3n_A 8 FDVGDWLESIHLGEHRDRFEDHEIEGA-HLPALTKEDFV----ELGV-TRVGHRENIERALRQLD 66 (76)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHTTCCGG-GGGGCCHHHHH----HTTC-CCHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHCCCHHHHHHHHHcCCCHH-HHccCCHHHHH----HcCC-CChhHHHHHHHHHHHHH
Confidence 356678999999999999999887665 89999999974 3565 35779999999998754
No 28
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.50 E-value=0.29 Score=34.92 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=47.2
Q ss_pred HHHHHHHhhh--hHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 15 QLYRVMQRAS--LLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 15 qly~vlqrAn--Ll~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
++...|+.-+ |-+|-+.|.+.+=| -+.|..+.++++.+ +|+. ++-|-+++.+|++...
T Consensus 15 ~V~~WL~~l~~gl~~Y~~~F~~~~I~-G~~Ll~Lt~~dL~~----LGI~-~~ghr~~il~~I~~L~ 74 (83)
T 2ean_A 15 QVVDWMKGLDDCLQQYIKNFEREKIS-GDQLLRITHQELED----LGVS-RIGHQELILEAVDLLC 74 (83)
T ss_dssp HHHHHHTTSCGGGTTTHHHHHHHTCC-HHHHTTCCHHHHHH----HTCC-CSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHCCCC-HHHHhhCCHHHHHH----hCCC-CHHHHHHHHHHHHHHH
Confidence 5666777664 88999999998764 78999999999865 6775 7889999999887753
No 29
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=92.08 E-value=0.59 Score=32.79 Aligned_cols=59 Identities=7% Similarity=0.120 Sum_probs=47.5
Q ss_pred HHHHHHHHhh--hhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 14 LQLYRVMQRA--SLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 14 lqly~vlqrA--nLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
=++...|+.. ++-+|-+.|.+++=|- +.|+.+.++++.+ +|+. ++-|-.++.++++.-.
T Consensus 9 ~~V~~WL~~~~~gl~~y~~~F~~~~I~G-~~Ll~L~~~dL~~----lGI~-~~g~r~~il~~I~~Lr 69 (78)
T 3bs7_A 9 SDVLKWYRRHCGEYTQYEQLFAQHDITG-RALLRITDSSLQR----MGVT-DNRDREAIWREIVKQR 69 (78)
T ss_dssp HHHHHHHHHHSGGGGGGHHHHHHTTCCH-HHHTTCCHHHHHH----HTCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHCCCCH-HHHhhCCHHHHhH----cCCC-CHHHHHHHHHHHHHHH
Confidence 3566778885 8999999999988766 8999999998765 5664 6789999999887653
No 30
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=90.87 E-value=0.87 Score=33.37 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=52.4
Q ss_pred hHHHHHHHHhhhh--HHHHHHHHHcCCchHHHHHhhChHHHHH-HHHHhcCCCCchHHHHHHHHHHHHhcCCC
Q psy1866 13 ELQLYRVMQRASL--LAYYDTLLEMGGDDVQQLCEAGEEEFLE-IMALVGMASKPLHVRRLQKALQEWTTNPA 82 (235)
Q Consensus 13 elqly~vlqrAnL--l~Yyd~~i~~GgDdvqql~~~~e~efle-im~lvGM~~KPlHVrRlqkal~~w~~~p~ 82 (235)
.=++-..|++.++ -+|-+.|.++ .=|-+.|+.+.++++.+ - +|+ .+.-|.+||.+++++....+.
T Consensus 22 ~~dV~~WL~~~gl~~~~Y~~~F~~~-~IdG~~Ll~Lt~~dL~~~~---LGI-~~~g~r~~il~~I~~Lr~~~~ 89 (91)
T 1v85_A 22 TEEVVLWLEQLGPWASLYRDRFLSE-RVNGRLLLTLTEEEFSRAP---YTI-ENSSHRRVILTELERVRSGPS 89 (91)
T ss_dssp HHHHHHHHHHHCGGGHHHHHHHHHT-TCCHHHHHHCCHHHHHSTT---TCC-CCHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHh-CCCHHHHhcCCHHHHhccC---CCC-CCHHHHHHHHHHHHHHHhccC
Confidence 3466677999999 9999999987 66788999999998875 2 255 567899999999999876653
No 31
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A
Probab=90.61 E-value=0.33 Score=37.22 Aligned_cols=59 Identities=7% Similarity=0.155 Sum_probs=51.1
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
++...|..-|+-+|.+.|++-|=+.++-|.+++.+.+.|| |. +|.=|..|+-|+.....
T Consensus 17 ~v~~wL~si~c~qY~~~F~eN~I~g~d~L~eLd~e~LkEl----GI-~kvGdRirIlk~vk~Lr 75 (85)
T 1ow5_A 17 FVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIAL----GV-NKIGDRLKILRKSKSFQ 75 (85)
T ss_dssp HHHHHHHHHSCTHHHHHHHHHTCCCHHHHHHCCHHHHHHH----TC-CCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCChhHHHHHHHcCCCcHHHHHHcCHHHHHHh----CC-CcccHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999998877664 65 47889999999887654
No 32
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=90.45 E-value=1 Score=31.73 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=47.0
Q ss_pred HHHHHHHHhh--hhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 14 LQLYRVMQRA--SLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 14 lqly~vlqrA--nLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
-++...|+.- +|-+|-+.|.+.+=| -+.|..+.++++.+ +|+. ++-|-+|+.+|++...
T Consensus 10 ~~V~~WL~~l~~gl~~Y~~~F~~~~i~-G~~Ll~L~~~dL~~----lGI~-~~ghr~~il~~I~~L~ 70 (80)
T 3bs5_B 10 SQVVDWMKGLDDCLQQYIKNFEREKIS-GDQLLRITHQELED----LGVS-RIGHQELILEAVDLLC 70 (80)
T ss_dssp HHHHHHHHTSCGGGGGGHHHHHHHTCC-HHHHHTCCHHHHHH----TTCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHcCCC-HHHHHHCCHHHHHH----cCCC-CHHHHHHHHHHHHHHH
Confidence 3566778877 499999999998764 78899999998865 6664 6789999999988753
No 33
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=89.27 E-value=0.46 Score=42.15 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=49.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
++..-|+.=+|-+|-+.|.+.+-|... |..+.++|+. .-+|| ++|+|-+||..||++...
T Consensus 22 ~V~~WLe~~GL~~Y~~~f~~n~~dG~~-Ll~lt~~dLe---~eLGI-~nplHRkKL~laI~el~~ 81 (265)
T 3tad_C 22 QVCSWLAEQGLGSYLSSGKHWIISGQT-LLQASQQDLE---KELGI-KHSLHRKKLQLALQALGS 81 (265)
T ss_dssp HHHHHHHHTTCCTTHHHHTTTCSCSHH-HHHSCHHHHH---HHTCC-CSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHHHHHhCCchHH-HHhCCHHHHH---HHhCC-CCHHHHHHHHHHHHHhcc
Confidence 556668878899999999999888775 7788888874 23488 599999999999999975
No 34
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=88.51 E-value=1.5 Score=33.32 Aligned_cols=57 Identities=7% Similarity=0.137 Sum_probs=47.4
Q ss_pred HHHHHHHhh--hhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q psy1866 15 QLYRVMQRA--SLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEW 77 (235)
Q Consensus 15 qly~vlqrA--nLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w 77 (235)
++...|+.. ++-+|-+.|.+++=|- +.|..+.++++.+ +|+. +.-|.+||.++++..
T Consensus 30 ~V~~WL~~~~~gl~~Y~~~F~~~~I~G-~~Ll~Lt~~dLk~----LGI~-~~GhR~kIl~~I~~L 88 (106)
T 3bs5_A 30 DVLKWYRRHCGEYTQYEQLFAQHDITG-RALLRITDSSLQR----MGVT-DNRDREAIWREIVKQ 88 (106)
T ss_dssp HHHHHHHHHSGGGGGGHHHHHHTTCCH-HHHTTCCHHHHHH----HTCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcchHHHHHHHHHcCccH-HHHhhCCHHHHHh----cCCC-CHHHHHHHHHHHHHH
Confidence 667778988 9999999999987665 8999999998765 6764 578999999988765
No 35
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=83.02 E-value=0.47 Score=35.97 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=52.4
Q ss_pred CCChhhH---HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 8 PNNEAEL---QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 8 p~~~~el---qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
+....+| ++-.-|++.++-+|-+.| .+ =|=+.|..+.+++|.+. . +|+ .+.-|.+||..|+++..+
T Consensus 14 ~~~v~~Ws~edV~~WL~~~Gl~~Y~~~F-~~--IdG~~LL~Lt~~dLk~~-~-LgI-~~~g~rkkl~~~I~~L~~ 82 (97)
T 2d8c_A 14 MKEVVYWSPKKVADWLLENAMPEYCEPL-EH--FTGQDLINLTQEDFKKP-P-LYR-VSSDNGQRLLDMIETLKM 82 (97)
T ss_dssp CSCCSSCCTTHHHHHHHHTTCTTTTTTT-TT--CCHHHHHTCCHHHHHSS-S-SSS-CSTTTTHHHHHHHHHHHH
T ss_pred CCchhhCCHHHHHHHHHHcCCHHHHHHH-Hc--CCCHHHhcCCHHHHhhC-C-CCC-CCHHHHHHHHHHHHHHHH
Confidence 3444455 888889999999999999 55 77889999999999871 0 254 678899999999998764
No 36
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.95 E-value=0.63 Score=35.68 Aligned_cols=66 Identities=15% Similarity=0.148 Sum_probs=49.3
Q ss_pred CCChhhH---HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 8 PNNEAEL---QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 8 p~~~~el---qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
|.++.+| ++-..|+-.+|-.||=.+.+.-+=|=.-|++..||+..| -.|| ++|||+.+-|.++-|-
T Consensus 12 P~dLs~lSv~EVs~~Lr~igL~e~vv~~F~~e~IDG~lL~~L~ee~L~e---df~l--s~Lq~kKi~~fI~GWr 80 (84)
T 2dkz_A 12 PADLSGLSIEEVSKSLRFIGLSEDVISFFVTEKIDGNLLVQLTEEILSE---DFKL--SKLQVKKIMQFINGSG 80 (84)
T ss_dssp CSCCSSCCHHHHHHHGGGTCCCHHHHHHHHTTTCCHHHHHHCCHHHHHH---TSCC--CHHHHHHHHHHHHCCC
T ss_pred chhhhhcCHHHHHHHHHHcCCcHHHHHHHHHHccchHHHHhCCHHHHHh---hcCC--CHHHHHHHHHHHhcCC
Confidence 5555555 566778899999988555555556667788888876544 3577 8999999999999884
No 37
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=82.16 E-value=2.4 Score=37.63 Aligned_cols=59 Identities=20% Similarity=0.175 Sum_probs=50.5
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
.+-+-|..-+|-||.+.|.+.|-| ..-|-...++|+. -.||.+ ++|-++|..|++....
T Consensus 94 wv~~WL~~IGL~QY~~~F~~~~iD-g~~L~~LT~~DL~----~LGIt~-~~HR~kil~aI~~L~~ 152 (265)
T 3tad_C 94 WVTRWLDDIGLPQYKTQFDEGRVD-GRMLHYMTVDDLL----SLKVVS-VLHHLSIKRAIQVLRI 152 (265)
T ss_dssp HHHHHHHHHTCGGGHHHHHHHTCC-HHHHHTCBHHHHH----HTTCCB-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHcCCC-HHHhcccCHHHHH----HcCCCc-HHhHHHHHHHHHHHhh
Confidence 456889999999999999999988 5788888899988 479976 9999999999987543
No 38
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.62 E-value=2.5 Score=31.57 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=46.5
Q ss_pred hhHHHHHHHHhhhhHH--HHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 12 AELQLYRVMQRASLLA--YYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 12 ~elqly~vlqrAnLl~--Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
..-|+...|+..+|-+ |-+.|.+++=|- +.|+.+.++++.| +|+. +.-|-++|.+++++..
T Consensus 31 s~~~V~~WL~~lgl~~~~y~~~F~~~~I~G-~~Ll~Lt~~dLke----LGI~-~~G~R~kil~~I~~Lr 93 (103)
T 2e8o_A 31 GPEQVCSFLRRGGFEEPVLLKNIRENEITG-ALLPCLDESRFEN----LGVS-SLGERKKLLSYIQRLV 93 (103)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHTTCCT-TTTTTCCHHHHHH----TTCC-CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHHHHHHHHcCCCH-HHHHhCCHHHHHH----cCCC-CHHHHHHHHHHHHHHH
Confidence 3446777899999987 999999975433 3788888888765 5664 5778889988888764
No 39
>4e9f_A Methyl-CPG-binding domain protein 4; HHH DNA glycosylase family, hydrolase-DNA complex; HET: DNA 3DR; 1.79A {Homo sapiens} PDB: 4e9e_A* 4e9g_A* 4e9h_A* 4ea5_A* 4dk9_A* 1ngn_A 4ea4_A* 4ew4_A* 4evv_A* 4ew0_A* 3iho_A
Probab=78.85 E-value=1.8 Score=35.25 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=44.4
Q ss_pred hhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCC-CchHHHHHHHHHHHHh
Q psy1866 22 RASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMAS-KPLHVRRLQKALQEWT 78 (235)
Q Consensus 22 rAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~-KPlHVrRlqkal~~w~ 78 (235)
.++...||..|++.. .+++.|++++++|+.+++.=+|+-. | .+||++.-+.++
T Consensus 46 ~~~v~~~~~~l~~~~-pt~~~la~a~~~el~~~i~~lG~y~~K---Ak~i~~~a~~~v 99 (161)
T 4e9f_A 46 GKMAIPVLWKFLEKY-PSAEVARTADWRDVSELLKPLGLYDLR---AKTIVKFSDEYL 99 (161)
T ss_dssp HHHHHHHHHHHHHHS-CSHHHHTTSCHHHHHHHHGGGSCHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCHHHHhccChHhHHhHhhhcCCHHHH---HHHHHHHhCCcC
Confidence 456778999999986 4899999999999999999999863 5 577777777665
No 40
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=77.15 E-value=5.5 Score=36.79 Aligned_cols=59 Identities=19% Similarity=0.263 Sum_probs=45.9
Q ss_pred HHHHHHHh-hhhHH-HHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 15 QLYRVMQR-ASLLA-YYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 15 qly~vlqr-AnLl~-Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
++..-|+. -++-+ |-+.|.+..-|. +-|..+.++|+ ..-+||.+ |||-++|+-||++.+
T Consensus 43 ~V~aWLe~~iGmp~~Yv~~~r~nvkSG-~~Ll~LSd~dL---ekeLGI~n-PLHRKKL~LAIqel~ 103 (334)
T 3tac_B 43 TVVAWLELWLGMPAWYVAACRANVKSG-AIMSALSDTEI---QREIGISN-PLHRLKLRLAIQEMV 103 (334)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHCCSH-HHHHTCCHHHH---HHTTCCCC-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHccch-HHHHhCCHHHH---HHHhCCCC-HHHHHHHHHHHHHHH
Confidence 44555767 57776 888898877766 66888888765 45578876 999999999999996
No 41
>2b6g_A VTS1P; alpha-helix, pentaloop, hairpin, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=75.33 E-value=4.4 Score=32.35 Aligned_cols=54 Identities=20% Similarity=0.137 Sum_probs=39.5
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEW 77 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w 77 (235)
+-.+|....|-.|.+.|.++ |++.|+.+.|+++.+ .|+..+ =|-|+|.+|+++-
T Consensus 52 V~~WL~sLrL~KY~~~F~~~---~~d~l~~LTeeDL~~----lGVta~-GaRrKlL~AI~~L 105 (119)
T 2b6g_A 52 IPMWLKSLRLHKYSDALSGT---PWIELIYLDDETLEK----KGVLAL-GARRKLLKAFGIV 105 (119)
T ss_dssp HHHHHHHHTCHHHHHHHTTS---CHHHHTTCCHHHHHH----HSCCCH-HHHHHHHHHHHHH
T ss_pred HHHHHHHCCChhHHHHHccC---CHHHHHhcCHHHHHH----CCCCcc-ccHHHHHHHHHHH
Confidence 34589999999999999554 778899999988776 465532 2666666666543
No 42
>3n5n_X A/G-specific adenine DNA glycosylase; alpha-helices, helix-hairpin-helix motif, iron-sulfur cluste hydrolase; 2.30A {Homo sapiens}
Probab=72.03 E-value=2.9 Score=36.99 Aligned_cols=52 Identities=27% Similarity=0.374 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 24 SLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 24 nLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
+...||..|++.- .+.+.|.+++++|+.+++.-+|+..| .++|+++.+..+.
T Consensus 66 ~v~~~~~rL~~~f-ptpe~La~a~~eel~~~ir~lG~~~K---A~~L~~~A~~i~~ 117 (287)
T 3n5n_X 66 TVINYYTGWMQKW-PTLQDLASASLEEVNQLWAGLGYYSR---GRRLQEGARKVVE 117 (287)
T ss_dssp HHHHHHHHHHHHC-CSHHHHHTSCHHHHHHHHTTSSCHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCHHHHHcCCHHHHHHHHHHcCCHHH---HHHHHHHHHHHHH
Confidence 4456899998875 48999999999999999999999866 5555555444443
No 43
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=69.38 E-value=11 Score=27.81 Aligned_cols=63 Identities=14% Similarity=0.143 Sum_probs=48.5
Q ss_pred hhhHHHHHHHHhh-hhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 11 EAELQLYRVMQRA-SLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 11 ~~elqly~vlqrA-nLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
-..-++...|++. ++-+|-+.|.++.= |=+.|..+.++++ ++-.|+ |-=|-.+|.+++++...
T Consensus 17 Ws~edV~~wL~~l~gl~~y~~~F~~~~I-dG~~LL~Lt~~dL---~k~lgI--klG~r~kI~~~I~~L~~ 80 (89)
T 1kw4_A 17 WSVDDVSNFIRELPGCQDYVDDFIQQEI-DGQALLRLKEKHL---VNAMGM--KLGPALKIVAKVESIKE 80 (89)
T ss_dssp CCHHHHHHHHHTSTTCGGGHHHHHHTTC-CHHHHHHCCHHHH---HTTTCC--CHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHCcChHHHHHHHHHhCc-cHHHHhcCCHHHH---HHHcCC--CHHHHHHHHHHHHHHHH
Confidence 3445778889998 99999999998643 4567888888875 455788 67789999999988653
No 44
>1kg2_A A/G-specific adenine glycosylase; DNA repair, hydrolase; 1.20A {Escherichia coli} SCOP: a.96.1.2 PDB: 1kg3_A 1muy_A 1kg6_A 1kg5_A 1mun_A 1mud_A 1kg4_A 1weg_A 1wei_A* 1wef_A* 1kg7_A 1kqj_A
Probab=68.13 E-value=5.7 Score=32.97 Aligned_cols=54 Identities=26% Similarity=0.398 Sum_probs=41.2
Q ss_pred hhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcC
Q psy1866 23 ASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTN 80 (235)
Q Consensus 23 AnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~ 80 (235)
++...+|..|++.- -+.+.|.+++++|+.+++.=+|+..| .++|+++.+.++.+
T Consensus 46 ~~v~~~~~~l~~~~-pt~~~la~~~~~~l~~~i~~~G~~~k---A~~l~~~a~~i~~~ 99 (225)
T 1kg2_A 46 ATVIPYFERFMARF-PTVTDLANAPLDEVLHLWTGLGYYAR---ARNLHKAAQQVATL 99 (225)
T ss_dssp HHHHHHHHHHHHHC-SSHHHHHHSCHHHHHHHHTTSCCTHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-CCHHHHHCCCHHHHHHHHHhCChHHH---HHHHHHHHHHHHHH
Confidence 44566888888764 57999999999999999999999865 66666655555543
No 45
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=62.95 E-value=4.9 Score=35.48 Aligned_cols=53 Identities=26% Similarity=0.487 Sum_probs=40.7
Q ss_pred hhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 23 ASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 23 AnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
++...||..|++.- -+++.|++++++|+.+++.-+|+..| .++|+++.+..+.
T Consensus 55 ~~~~~~~~~l~~~~-pt~~~la~a~~~~l~~~i~~~G~~~r---a~~l~~~a~~~~~ 107 (369)
T 3fsp_A 55 ETVIPYFEQFIDRF-PTLEALADADEDEVLKAWEGLGYYSR---VRNLHAAVKEVKT 107 (369)
T ss_dssp HHHHHHHHHHHHHC-CSHHHHHTSCHHHHHHTTTTSSCTHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-CCHHHHHCCCHHHHHHHHHhcChHHH---HHHHHHHHHHHHH
Confidence 45567888898764 48999999999999999999999876 5555555544443
No 46
>1pu6_A 3-methyladenine DNA glycosylase; helix-hairpin-helix, base excision repair, hydrolase; HET: KCX; 1.64A {Helicobacter pylori} SCOP: a.96.1.5 PDB: 1pu7_A* 1pu8_A*
Probab=62.40 E-value=6.9 Score=32.54 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=39.9
Q ss_pred hhhHHHHHHHHHcCCch------HHHHHhhChHHHHHHHHHhcCCC-CchHHHHHHHHHHHHh
Q psy1866 23 ASLLAYYDTLLEMGGDD------VQQLCEAGEEEFLEIMALVGMAS-KPLHVRRLQKALQEWT 78 (235)
Q Consensus 23 AnLl~Yyd~~i~~GgDd------vqql~~~~e~efleim~lvGM~~-KPlHVrRlqkal~~w~ 78 (235)
++-..+|..|.+.|--+ .+.|++++++|+.+++.-+|+.. | .++|+++.+.+.
T Consensus 46 ~~v~~~~~~L~~~~~pt~~~~~t~~~la~~~~e~L~~~ir~~G~~~~K---A~~L~~~a~~i~ 105 (218)
T 1pu6_A 46 EAVLKSLENLKNAFILENDDEINLKKIAYIEFSKLAECVRPSGFYNQK---AKRLIDLSGNIL 105 (218)
T ss_dssp HHHHHHHHHHHHTTSSCSCHHHHHHHHHHSCHHHHHHHTGGGSCHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCccccccHHHHHhCCHHHHHHHHHHCCCcHHH---HHHHHHHHHHHH
Confidence 44567899999986555 99999999999999999999875 6 444444444433
No 47
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=55.30 E-value=16 Score=33.72 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=46.0
Q ss_pred HHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q psy1866 17 YRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEW 77 (235)
Q Consensus 17 y~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w 77 (235)
.+-|..-+|-||.+.|.+.+. |-.-|-....++... ..||.+ ++|...|+.+++=.
T Consensus 167 ~~WL~dIGLpQY~~~F~~~~V-DgR~L~~Lt~~DL~~---~LgIt~-~~Hr~sI~~gI~~L 222 (334)
T 3tac_B 167 NEWLPSLGLPQYRSYFMECLV-DARMLDHLTKKDLRV---HLKMVD-SFHRTSLQYGIMCL 222 (334)
T ss_dssp HTHHHHTTCGGGHHHHHHTTC-CHHHHTTCCHHHHHH---TTCCCC-HHHHHHHHHHHHHH
T ss_pred hhhccccChHHhHHHHHhcCc-chhhhhhccHHHHHh---ccCCCc-HHHHHHHHHHHHHh
Confidence 378899999999999999999 558887777777633 358876 99999999988764
No 48
>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A
Probab=53.10 E-value=19 Score=27.29 Aligned_cols=54 Identities=20% Similarity=0.137 Sum_probs=41.1
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEW 77 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w 77 (235)
+-..|..=.|-.|.+.|.++ |++.++...|++..+ +|++.+ =|-|++-+|+++-
T Consensus 21 V~~WL~sLrLhKY~~~F~~~---~~~~l~~LtdedL~~----~GVta~-GaRrKil~aI~~l 74 (88)
T 2d3d_A 21 IPMWLKSLRLHKYSDALSGT---PWIELIYLDDETLEK----KGVLAL-GARRKLLKAFGIV 74 (88)
T ss_dssp HHHHHHHTTCGGGHHHHTTS---CHHHHTTCCHHHHHH----TTCCCH-HHHHHHHHHHHHH
T ss_pred HHHHHHHcccchhHHHHhcC---CHHHHHHcCHHHHHH----cCCccH-hHHHHHHHHHHHH
Confidence 34567788899999999875 889999999999877 576543 4777777776654
No 49
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=51.92 E-value=8.3 Score=28.67 Aligned_cols=57 Identities=9% Similarity=0.090 Sum_probs=43.3
Q ss_pred HHHHHHH--hhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 15 QLYRVMQ--RASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 15 qly~vlq--rAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
|+..-|+ .-++.+| .|.+.+= +-++|..+.++++.+ +|+ .|.-|..|+-++++...+
T Consensus 18 ~V~~WL~~l~~~l~~Y--~F~~~~I-~G~~LL~Lt~~dL~~----LGI-~~~Ghr~~Il~~I~~L~~ 76 (91)
T 1wwv_A 18 KVATWLRGLDDSLQDY--PFEDWQL-PGKNLLQLCPQSLEA----LAV-RSLGHQELILGGVEQLQA 76 (91)
T ss_dssp THHHHHHHHCHHHHTS--CHHHHCC-CHHHHTTCCTTTGGG----GTC-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCccccc--cHHhcCc-cHHHHhhCCHHHHHH----cCC-CcHhHHHHHHHHHHHHHH
Confidence 4455566 3367788 7987765 489999999999776 675 468999999999887754
No 50
>1kea_A Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.96.1.2
Probab=50.27 E-value=13 Score=30.78 Aligned_cols=52 Identities=10% Similarity=0.244 Sum_probs=38.1
Q ss_pred hhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCC-CCchHHHHHHHHHH
Q psy1866 23 ASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMA-SKPLHVRRLQKALQ 75 (235)
Q Consensus 23 AnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~-~KPlHVrRlqkal~ 75 (235)
++-..+|..|.+.- -+.+.|.++++||+.+++.-+|+. .|--+++.+-+++.
T Consensus 51 ~~~~~~~~~l~~~f-ptp~~la~a~~e~l~~~i~~~G~~~~KA~~l~~~a~~i~ 103 (221)
T 1kea_A 51 GHVKKIYDKFFVKY-KCFEDILKTPKSEIAKDIKEIGLSNQRAEQLKELARVVI 103 (221)
T ss_dssp HHHHHHHHHHHHHC-CSHHHHHHSCHHHHHHHTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-CCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 34456888888874 689999999999999999999997 46444444444333
No 51
>1orn_A Endonuclease III; DNA repair, DNA glycosylase, [4Fe-4S] cluster, iron-sulfur cluster, hydrolase/DNA complex; HET: PED; 1.70A {Geobacillus stearothermophilus} SCOP: a.96.1.1 PDB: 1orp_A* 1p59_A*
Probab=45.47 E-value=17 Score=30.40 Aligned_cols=52 Identities=15% Similarity=0.148 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCC-CCchHHHHHHHHHHH
Q psy1866 24 SLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMA-SKPLHVRRLQKALQE 76 (235)
Q Consensus 24 nLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~-~KPlHVrRlqkal~~ 76 (235)
+-..+|..|++.- .+.++|.+++++|+.+++.-+|+. .|--+++.+-+++.+
T Consensus 50 ~v~~~~~~l~~~f-pt~~~la~a~~~~l~~~i~~~G~~~~KA~~l~~~a~~i~~ 102 (226)
T 1orn_A 50 LVNKVTKRLFEKY-RTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLID 102 (226)
T ss_dssp HHHHHHHHHHHHC-CSHHHHHSSCHHHHHHHTGGGSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCHHHHHcCCHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 3456778887764 589999999999999999999986 465555555555443
No 52
>3skq_A Mitochondrial distribution and morphology protein; 14-3-3-like membrane protein, mitochondrial ribosome, respir chain biogenesis; 2.10A {Saccharomyces cerevisiae}
Probab=44.62 E-value=26 Score=31.06 Aligned_cols=62 Identities=19% Similarity=0.348 Sum_probs=52.6
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 13 ELQLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 13 elqly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
.+=-|++-.|+..+..=|..|..-| |.+| ..+|+......=||.+--+-..||...|++|..
T Consensus 119 ~~LR~rLr~rl~~I~~DDr~I~~EG--V~sL---s~~ELr~AC~~RGm~~~gls~e~LR~~L~~WL~ 180 (249)
T 3skq_A 119 NMLRYQIRSKLKDIMNDDKTIDYEG--VESL---SQEELYQACVSRGMKAYGVSKEDLVDNLKVWLE 180 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--GGGS---CHHHHHHHHHHTTCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhC--cccC---CHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence 3445677888888999999999888 6655 478999999999999998999999999999974
No 53
>2y9u_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle, mutations, A syndrome; 1.60A {Homo sapiens} PDB: 1rg6_A
Probab=44.31 E-value=41 Score=23.98 Aligned_cols=53 Identities=9% Similarity=0.140 Sum_probs=45.4
Q ss_pred HHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q psy1866 19 VMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEW 77 (235)
Q Consensus 19 vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w 77 (235)
.|..-++.+|-|.|.+.|=..++++....-||+.. +|..- =|.+++-+++++.
T Consensus 10 WLd~i~m~~Y~d~F~~~g~~s~~~v~~lt~eDL~~----~GIt~--ghqkkIl~siq~l 62 (69)
T 2y9u_A 10 FLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDLAS----LKIPE--QFRHAIWKGILDH 62 (69)
T ss_dssp HHHTTTCGGGHHHHHTTTCCBHHHHTTCCHHHHHH----TTCCH--HHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHcCCCcHHHHHHcCHHHHHh----cCCCh--hhHHHHHHhHHHH
Confidence 37888899999999999999999999999998765 57775 6888888887764
No 54
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=41.01 E-value=93 Score=22.83 Aligned_cols=63 Identities=13% Similarity=0.111 Sum_probs=46.4
Q ss_pred ChhhHHHHHHHHhh--hhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHh
Q psy1866 10 NEAELQLYRVMQRA--SLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 10 ~~~elqly~vlqrA--nLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~ 78 (235)
.-..-+++..|++. ++-.|-+.|.++. =|=+-|..+.++++++ ..|| |-=+..+|-.++.+..
T Consensus 16 ~WsvedV~~wl~~~~~g~~~y~~~F~~~e-IDG~aLL~Lt~~dl~~---~mgi--klGpalKi~~~I~~lk 80 (89)
T 1pk1_B 16 DWTIEEVIQYIESNDNSLAVHGDLFRKHE-IDGKALLRLNSERMMK---YMGL--KLGPALKICNLVNKVN 80 (89)
T ss_dssp GCCHHHHHHHHHHHCGGGGGGHHHHHHTT-CCHHHHHTCCHHHHHH---HSCC--CHHHHHHHHHHHHHHC
T ss_pred hCCHHHHHHHHHHHccchHHHHHHHHHcC-cChHHHhcCCHHHHHH---ccCC--CccHHHHHHHHHHHHH
Confidence 33455788889988 5889999999763 3446788899988655 4566 6667888888887654
No 55
>3d55_A Antitoxin, uncharacterized protein RV3357/MT3465; tetramer, toxin neutraliSer, toxin inhibitor; 2.13A {Mycobacterium tuberculosis} PDB: 3cto_A 3oei_A* 3oei_E*
Probab=39.50 E-value=18 Score=25.97 Aligned_cols=55 Identities=22% Similarity=0.311 Sum_probs=41.5
Q ss_pred hhhhHHHHHHHHH---------cCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcC
Q psy1866 22 RASLLAYYDTLLE---------MGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTN 80 (235)
Q Consensus 22 rAnLl~Yyd~~i~---------~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~ 80 (235)
|+||..|.|...+ .|+.++ |+. .+||..+++.+...+-|--.+||.+++.+....
T Consensus 9 r~~l~~~l~~v~~~~epv~Itr~g~~~~--l~s--~e~y~~l~et~~ll~~~~~~~~l~~a~~~~~~G 72 (91)
T 3d55_A 9 RQRLFPLIEQVNTDHQPVRITSRAGDAV--LMS--ADDYDAWQETVYLLRSPENARRLMEAVARDKAG 72 (91)
T ss_dssp HHTHHHHHHHHHHHCCCEEEECTTCCEE--EEE--HHHHHHHHHHHHHTTSHHHHHHHHHHHTC----
T ss_pred HHhHHHHHHHHHhhCCcEEEEECCCcce--eee--HHHHhhHHHHHHHHhChHHHHHHHHHHHHHHcC
Confidence 6888888888775 477776 554 578989998888888888899999999776543
No 56
>2es6_A VTS1P; SAM domain, protein structure, gene regulation; NMR {Saccharomyces cerevisiae} PDB: 2ese_A
Probab=38.13 E-value=30 Score=27.02 Aligned_cols=54 Identities=20% Similarity=0.137 Sum_probs=41.3
Q ss_pred HHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q psy1866 16 LYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEW 77 (235)
Q Consensus 16 ly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w 77 (235)
+-..|+.=.|-.|.+.|.++ |++.++...|+++.+ .|++.+ =|-|+|-+|+++.
T Consensus 34 V~~WLksLrLhKY~~~F~~~---~~~~l~~LTdedL~~----~GVta~-GARrKiL~aI~~L 87 (101)
T 2es6_A 34 IPMWLKSLRLHKYSDALSGT---PWIELIYLDDETLEK----KGVLAL-GARRKLLKAFGIV 87 (101)
T ss_dssp HHHHHHTTTCCCTHHHHTTS---CHHHHTTCCHHHHHH----HTCCSH-HHHHHHHHHHHHH
T ss_pred HHHHHHHccCcchHHHHccC---CHHHHHhcCHHHHHH----cCCccH-hHHHHHHHHHHHH
Confidence 45668888899999999876 889999999998877 575543 3677777776654
No 57
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=33.42 E-value=41 Score=27.19 Aligned_cols=53 Identities=26% Similarity=0.476 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHcCC-c----hHHHHHhh-ChHHHHHHHHH-hcCC----CCchHHHHHHHHHHHH
Q psy1866 24 SLLAYYDTLLEMGG-D----DVQQLCEA-GEEEFLEIMAL-VGMA----SKPLHVRRLQKALQEW 77 (235)
Q Consensus 24 nLl~Yyd~~i~~Gg-D----dvqql~~~-~e~efleim~l-vGM~----~KPlHVrRlqkal~~w 77 (235)
+|..||...+.+-- + |++.+.+- +.+|...++.+ +|.| .|--||.|++. |.+.
T Consensus 80 ~i~~Yy~e~L~~~i~~~~~pd~~~Ia~~~d~~el~kLl~LiLg~AV~c~~ke~~I~~I~~-L~~~ 143 (164)
T 1wix_A 80 GITSYYHEFLGQQISEELIPDLNQITECADPVELGRLLQLILGCAVNCEKKQEHIKNIMT-LEES 143 (164)
T ss_dssp HHHHHHHTTTCCCCCTTTCCCHHHHHTTCCHHHHHHHHHHHHHHTTSSSTHHHHHHHHHH-SCHH
T ss_pred HHHHHHHHHhcCcccccCCCCHHHHHhCCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHc-CCHH
Confidence 78899987766532 2 89999885 67777776665 5544 67788988863 4443
No 58
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=32.16 E-value=41 Score=26.88 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=28.3
Q ss_pred chHHHHHhh--ChHHHHHHHHHhc--CCCCchHHHHHHHHHH
Q psy1866 38 DDVQQLCEA--GEEEFLEIMALVG--MASKPLHVRRLQKALQ 75 (235)
Q Consensus 38 Ddvqql~~~--~e~efleim~lvG--M~~KPlHVrRlqkal~ 75 (235)
..+++|+.+ ..++|.|||.++- +..++=..|+.-|||.
T Consensus 24 ~~m~eIa~~T~~~~~~~~Im~~l~kRL~d~~k~Wr~vyKaL~ 65 (144)
T 1eyh_A 24 SLMSEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMT 65 (144)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHHHHHHHSCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHhCCHhhHHHHHHHHHHHHccCCcchHHHhHHHH
Confidence 346677777 5789999999874 5566667888888874
No 59
>2ob9_A Tail assembly chaperone; bacteriophage HK97, morphogenesis; 2.30A {Enterobacteria phage HK97}
Probab=31.93 E-value=23 Score=28.91 Aligned_cols=47 Identities=23% Similarity=0.299 Sum_probs=31.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHcCC------chHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHH
Q psy1866 14 LQLYRVMQRASLLAYYDTLLEMGG------DDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQ 75 (235)
Q Consensus 14 lqly~vlqrAnLl~Yyd~~i~~Gg------Ddvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~ 75 (235)
-+-+.-=-||++..|.|.|++-+| ||++|| +=..=|.|-|=|++||.
T Consensus 62 ~ek~~rn~rA~~vlf~~vL~DE~g~rvFsd~D~~~v---------------~~~ygpvh~RLl~~Al~ 114 (130)
T 2ob9_A 62 SEKAHRNLCADVVLFIDVLCDTDKQPVFSVDEEEQV---------------REIYGPVHSRLLKQALD 114 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHEECTTSCBSSCGGGHHHH---------------HTTCCHHHHHHHHHHHT
T ss_pred HHHHHHhccccHHHHHHHHhcCCCcccCCHHHHHHH---------------HHhhhhHHHHHHHHHHH
Confidence 344444567888888888776554 444444 34466999999999985
No 60
>2bzw_B BCL2-antagonist of cell death; transcription, apoptosis, phosphorylation, transcription complex, alternative splicing, mitochondrion; 2.3A {Mus musculus} PDB: 1g5j_B
Probab=31.57 E-value=9 Score=23.96 Aligned_cols=10 Identities=40% Similarity=0.916 Sum_probs=7.8
Q ss_pred hhhhhhhccc
Q psy1866 225 ITNKKYGRQL 234 (235)
Q Consensus 225 ~~~~~~~~~~ 234 (235)
...+||||+|
T Consensus 6 ~~A~rYGReL 15 (27)
T 2bzw_B 6 WAAQRYGREL 15 (27)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhHHH
Confidence 4568999986
No 61
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=30.57 E-value=1.2e+02 Score=23.94 Aligned_cols=48 Identities=21% Similarity=0.324 Sum_probs=33.9
Q ss_pred HHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCC-------chHHH-HHHHHHHHHhcC
Q psy1866 29 YDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASK-------PLHVR-RLQKALQEWTTN 80 (235)
Q Consensus 29 yd~~i~~GgDdvqql~~~~e~efleim~lvGM~~K-------PlHVr-Rlqkal~~w~~~ 80 (235)
-|+++..+|+-+++-.. ..+|++- |+.+.++ +..|+ |+-.-++.|...
T Consensus 62 Le~~vkNCG~~fh~eva--s~~Fl~e--L~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~ 117 (148)
T 1mhq_A 62 LEMCMNHCGEKFHSEVA--KFRFLNE--LIKVLSPKYLGSWATGKVKGRVIEILFSWTVW 117 (148)
T ss_dssp HHHHHHHSCHHHHHHHT--SHHHHHH--HHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCHHHHHHHh--hHHHHHH--HHHHHccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 48899999999965443 4699985 4555543 66776 566677899863
No 62
>2y9t_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle; NMR {Homo sapiens}
Probab=29.47 E-value=54 Score=24.20 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=46.2
Q ss_pred HHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 19 VMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 19 vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
.|..=++.+|-|.|.+.|=..++++....-||... +|..- =|.+++-+++++.-.
T Consensus 12 WLd~i~m~~Y~d~F~~~G~~sl~~V~~lt~eDL~~----mGIt~--gHqkkIl~siq~lr~ 66 (82)
T 2y9t_A 12 FLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDLAS----LKIPE--QFRHAIWKGILDHRQ 66 (82)
T ss_dssp HHHHHTCGGGHHHHHTTTCCBSGGGTTCCHHHHHH----TTCCH--HHHHHHHHHHHHHHH
T ss_pred HHHHcCchHHHHHHHHcCCCcHHHHHhcCHHHHHh----cCCCh--hhHHHHHhhHHHHHH
Confidence 37777899999999999999999999999988654 57775 699999888877544
No 63
>1oxj_A RNA-binding protein smaug; SAM domain, PHAT domain; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 a.118.1.13
Probab=28.63 E-value=36 Score=28.88 Aligned_cols=56 Identities=14% Similarity=0.185 Sum_probs=45.0
Q ss_pred HHHHHHHhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhc
Q psy1866 15 QLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 15 qly~vlqrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~ 79 (235)
-+...|..=.|-.|.+.|.+++ .+.+....|+++.+ .|++ + =|-|++-+|+++...
T Consensus 9 dV~~WLksLrLhKY~~~F~~~~---~e~~~~LTdedL~~----~GVT-~-GARrKIL~aIq~Lre 64 (173)
T 1oxj_A 9 GIGLWLKSLRLHKYIELFKNMT---YEEMLLITEDFLQS----VGVT-K-GASHKLALCIDKLKE 64 (173)
T ss_dssp THHHHHHHTTCGGGGGGGTTCC---HHHHTTCCHHHHHH----TTCC-H-HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcccchhHHHHccCC---HHHHHhcCHHHHHH----CCCc-h-HHHHHHHHHHHHHHH
Confidence 3456788889999999998764 66788888988877 4998 5 899999999887764
No 64
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=26.59 E-value=7.7 Score=32.88 Aligned_cols=39 Identities=28% Similarity=0.704 Sum_probs=27.6
Q ss_pred HHHHHHHcCCchHHHHHhh------ChHHHHHHHHHhcCCCCchHH
Q psy1866 28 YYDTLLEMGGDDVQQLCEA------GEEEFLEIMALVGMASKPLHV 67 (235)
Q Consensus 28 Yyd~~i~~GgDdvqql~~~------~e~efleim~lvGM~~KPlHV 67 (235)
.|..||+ ||.++++.|.. .+-+=+||+||.-.-..|++|
T Consensus 152 ~f~pFi~-~~~~~e~yc~~~ve~~~~~~~~i~i~ALa~al~v~I~V 196 (234)
T 2zfy_A 152 FFEHFIE-GGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQV 196 (234)
T ss_dssp HHGGGCC-SSCCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEE
T ss_pred HHhcccC-CCCCHHHHHHHHhhhHhhcCCHHHHHHHHHHhCCCEEE
Confidence 4677775 56799999952 244667888887777777766
No 65
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=25.78 E-value=10 Score=33.86 Aligned_cols=40 Identities=25% Similarity=0.503 Sum_probs=29.4
Q ss_pred HHHHHHHcCCchHHHHHhh------ChHHHHHHHHHhcCCCCchHHH
Q psy1866 28 YYDTLLEMGGDDVQQLCEA------GEEEFLEIMALVGMASKPLHVR 68 (235)
Q Consensus 28 Yyd~~i~~GgDdvqql~~~------~e~efleim~lvGM~~KPlHVr 68 (235)
.|..||. ||.+|++.|.. .|-+-++|+||.....-|++|-
T Consensus 187 ~f~pFi~-~~~~v~~yC~~eVe~~~~e~d~leI~ALa~aL~v~I~V~ 232 (284)
T 4dhi_B 187 EYAPFID-EGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIE 232 (284)
T ss_dssp HHGGGSC-TTCCHHHHHHHHTSSTTCCCCHHHHHHHHHHTTCCEEEE
T ss_pred HHHhhcC-CCCCHHHHHHHhceehhhcccHHHHHHHHHHhCCcEEEE
Confidence 5666775 67899999972 3567788888887777777764
No 66
>1inz_A EPS15-interacting portein(epsin); alpha-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.118.9.1
Probab=25.07 E-value=57 Score=26.21 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=27.8
Q ss_pred CchHHHHHhh--ChHHHHHHHHHhc--CCCCchHHHHHHHHHH
Q psy1866 37 GDDVQQLCEA--GEEEFLEIMALVG--MASKPLHVRRLQKALQ 75 (235)
Q Consensus 37 gDdvqql~~~--~e~efleim~lvG--M~~KPlHVrRlqkal~ 75 (235)
|..+++|+.+ ..++|.|||.++- +..|+=.-|+.-|||.
T Consensus 41 ~~~m~eIa~~T~~~~~~~eIm~~l~kRL~d~~k~WR~vyKaL~ 83 (148)
T 1inz_A 41 SSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMT 83 (148)
T ss_dssp SCHHHHHHHHHTSSHHHHHHHHHHHHGGGCCSSCTHHHHHHHH
T ss_pred HHHHHHHHHHhCCHhhHHHHHHHHHHHHccCCcchhHhhHHHH
Confidence 4567777777 5789999999873 4455556777777764
No 67
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.94 E-value=79 Score=22.62 Aligned_cols=38 Identities=11% Similarity=0.247 Sum_probs=29.5
Q ss_pred HHHHHHHhhCCCCCchhh-----hhhhhhHHhHHHHhcCCccc
Q psy1866 171 DIAQQLVRALPHLEPKAQ-----NSKKKICKDLEAVFQMSDEA 208 (235)
Q Consensus 171 ecaeRL~~tLPq~dp~~~-----~~nKKlaK~lehIf~Mse~D 208 (235)
+.++.|..-+|..|..-+ +++..+-+.|..+++|++++
T Consensus 20 ~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~LL~ms~~~ 62 (67)
T 2dhy_A 20 QAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLES 62 (67)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCCC
Confidence 346678888999999854 46778999999999997654
No 68
>3sks_A Putative oligoendopeptidase F; structural genomics, center for structural genomics of infec diseases, csgid, protease, hydrolase; 2.05A {Bacillus anthracis}
Probab=24.68 E-value=1.5e+02 Score=27.74 Aligned_cols=55 Identities=22% Similarity=0.558 Sum_probs=36.9
Q ss_pred HHHHHHHHhhh---hHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCch---HHHHHHHHHHHHhcC
Q psy1866 14 LQLYRVMQRAS---LLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPL---HVRRLQKALQEWTTN 80 (235)
Q Consensus 14 lqly~vlqrAn---Ll~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPl---HVrRlqkal~~w~~~ 80 (235)
++||...++.+ .-.|.+ |+..||-+ .+.|+++.+|+. +|+ .+..+.+.+.+|...
T Consensus 501 ~~l~~~~~~~~~~~~~~Y~~-~L~~Ggs~----------~~~ellk~aGvd-~~F~~~~i~~~~~~i~~~l~~ 561 (567)
T 3sks_A 501 LQFWKRARDNRQEAWEDYVN-LCQQGGSK----------SFLELVEVANLT-SPFAEGCVKSVITEIEAWLHA 561 (567)
T ss_dssp HHHHHHHHHCHHHHHHHHHH-HHHTTTSS----------CHHHHHHHTTCC-CTTSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCHHHHHHHHH-HHhCcCCC----------CHHHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHh
Confidence 45555444321 233443 77777754 788999999998 675 588888889888753
No 69
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=24.53 E-value=89 Score=25.56 Aligned_cols=52 Identities=17% Similarity=0.313 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCchHHHHHhhChHHHHHH-HHHhcCCCCchHHH-HHHHHHHHHhcC
Q psy1866 26 LAYYDTLLEMGGDDVQQLCEAGEEEFLEI-MALVGMASKPLHVR-RLQKALQEWTTN 80 (235)
Q Consensus 26 l~Yyd~~i~~GgDdvqql~~~~e~eflei-m~lvGM~~KPlHVr-Rlqkal~~w~~~ 80 (235)
|.-.|+++..+|+-+++.. ..++|++- +.+++ ...+..|+ |+..-+++|...
T Consensus 63 L~Lle~~vkNcG~~f~~ev--a~~~fl~~l~~l~~-~~~~~~Vk~kil~li~~W~~~ 116 (220)
T 1dvp_A 63 LLVLESIVKNCGAPVHEEV--FTKENCEMFSSFLE-STPHENVRQKMLELVQTWAYA 116 (220)
T ss_dssp HHHHHHHHHHSHHHHHHHH--SSHHHHHHHHHHHH-HCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHH--HhHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHH
Confidence 3456888999999887543 34567764 44444 24456675 456677899863
No 70
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=24.25 E-value=72 Score=28.79 Aligned_cols=46 Identities=22% Similarity=0.314 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHHHHhcCCC
Q psy1866 26 LAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNPA 82 (235)
Q Consensus 26 l~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~~w~~~p~ 82 (235)
...|+.|++..+|.+=+ ..|.+|.. .|=-|+.||++-|++|-.+|.
T Consensus 226 ~~a~e~~a~~~~d~~~~------~~~~~i~~-----~~~~h~~~l~~~~~~~g~~~~ 271 (365)
T 3fse_A 226 LEALEKYTEKESDVEAK------ALFQEMIT-----NKQRHIEYLETYLTRLGEKPS 271 (365)
T ss_dssp HHHHHHHHHHCCCHHHH------HHHHHHHH-----HHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHhcCCHHHH------HHHHHHHH-----HHHHHHHHHHHHHHHhCCCcC
Confidence 67899999999887654 36888864 688999999999999988875
No 71
>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.05 E-value=41 Score=23.15 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=28.4
Q ss_pred CCchHHHHHhhChHHHHHHHHHhcCCCCch------HHHHHHHHHHHHhcCC
Q psy1866 36 GGDDVQQLCEAGEEEFLEIMALVGMASKPL------HVRRLQKALQEWTTNP 81 (235)
Q Consensus 36 GgDdvqql~~~~e~efleim~lvGM~~KPl------HVrRlqkal~~w~~~p 81 (235)
|.+|+-+|...-++-..+.|++.|...+.- |=..|+.|+..|..+|
T Consensus 4 ~~~~~~~~s~~~~e~i~qF~~iTg~~~~~A~~~Le~~~WnLe~Av~~ff~~~ 55 (62)
T 2dal_A 4 GSSGGSAASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGG 55 (62)
T ss_dssp CCCCCCSSCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTSCHHHHHHHHHHSC
T ss_pred CccchhhcCccHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 566666666555666777777777652110 1123567888887766
No 72
>2h56_A DNA-3-methyladenine glycosidase; 10174367, EC 3.2.2.-, struc genomics, PSI-2, protein structure initiative, joint center structural genomics; 2.55A {Bacillus halodurans}
Probab=23.77 E-value=73 Score=26.58 Aligned_cols=46 Identities=22% Similarity=0.367 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHc-CCc--hHHHHHhhChHHHHHHHHHhcCCC-CchHHHHHHHH
Q psy1866 24 SLLAYYDTLLEM-GGD--DVQQLCEAGEEEFLEIMALVGMAS-KPLHVRRLQKA 73 (235)
Q Consensus 24 nLl~Yyd~~i~~-GgD--dvqql~~~~e~efleim~lvGM~~-KPlHVrRlqka 73 (235)
+-..+|..|.+. |.- +.++|++++++|+ .-+|+.. |--.++++-++
T Consensus 68 ~a~~~~~rL~~~~G~~fPtp~~la~~~~e~L----r~~G~~~~KA~~I~~~A~~ 117 (233)
T 2h56_A 68 AASAIYGRVEQLVGGALEKPEQLYRVSDEAL----RQAGVSKRKIEYIRHVCEH 117 (233)
T ss_dssp HHHHHHHHHHHHHTSCCCCTHHHHTSCHHHH----HHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHcCCHHHH----HHcCCCHHHHHHHHHHHHH
Confidence 345688888887 777 8999999999886 6688865 44444443333
No 73
>2abk_A Endonuclease III; DNA-repair, DNA glycosylase; 1.85A {Escherichia coli} SCOP: a.96.1.1
Probab=23.61 E-value=41 Score=27.45 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=35.9
Q ss_pred hHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhcCC-CCchHHHHHHHHHHHHhc
Q psy1866 25 LLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMA-SKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 25 Ll~Yyd~~i~~GgDdvqql~~~~e~efleim~lvGM~-~KPlHVrRlqkal~~w~~ 79 (235)
-...+..|.+. --+.+.|.+++++|+.+++.=+|+. .| .++|+++.+.++.
T Consensus 47 v~~~~~~l~~~-fpt~~~la~a~~~~l~~~i~~~G~~~~K---A~~l~~~a~~~~~ 98 (211)
T 2abk_A 47 VNKATAKLYPV-ANTPAAMLELGVEGVKTYIKTIGLYNSK---AENIIKTCRILLE 98 (211)
T ss_dssp HHHHHHHHTTT-CCSHHHHHHHHHHHHHHHHTTSTTHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCHHHHHCCCHHHHHHHHHHcCCChHH---HHHHHHHHHHHHH
Confidence 44566666655 4689999999999999999989985 35 4455554444443
No 74
>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=23.45 E-value=1.7e+02 Score=19.82 Aligned_cols=31 Identities=16% Similarity=0.449 Sum_probs=20.9
Q ss_pred hHHHHHhhChHHHHHHHHHhcCCCCchHHHHHHHHHH
Q psy1866 39 DVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQ 75 (235)
Q Consensus 39 dvqql~~~~e~efleim~lvGM~~KPlHVrRlqkal~ 75 (235)
.++.|+.|..||+.++ +| +-...+++.+.|+
T Consensus 26 s~~~i~~As~eeL~~v---ig---~~~~A~~I~~~l~ 56 (63)
T 2a1j_A 26 NIAELAALSQDELTSI---LG---NAANAKQLYDFIH 56 (63)
T ss_dssp SHHHHHTCCHHHHHHH---HS---CHHHHHHHHHHHH
T ss_pred CHHHHHHCCHHHHHHH---cC---chHHHHHHHHHHh
Confidence 5789999999998888 55 3233455554443
No 75
>1rh5_B Preprotein translocase SECE subunit; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.23.28.1 PDB: 1rhz_B 2yxq_B 2yxr_B 3dkn_B
Probab=23.02 E-value=28 Score=25.63 Aligned_cols=28 Identities=25% Similarity=0.099 Sum_probs=13.3
Q ss_pred chHHHHHhhChHHHHHHHHHhcCCCCch
Q psy1866 38 DDVQQLCEAGEEEFLEIMALVGMASKPL 65 (235)
Q Consensus 38 Ddvqql~~~~e~efleim~lvGM~~KPl 65 (235)
||++++.+.-.+-+.+.+.++-+++||=
T Consensus 3 ~~~~~~~e~~~~f~kd~~rvlk~~~KPd 30 (74)
T 1rh5_B 3 TDFNQKIEQLKEFIEECRRVWLVLKKPT 30 (74)
T ss_dssp ---------CCHHHHHHHHHHHSEECCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5667777766666777777777777773
No 76
>3onk_A Epsin-3, ENT3; helix, protein transport; 2.09A {Saccharomyces cerevisiae} PDB: 3onl_A
Probab=22.73 E-value=52 Score=26.61 Aligned_cols=39 Identities=26% Similarity=0.268 Sum_probs=27.7
Q ss_pred CchHHHHHhhC--hHHHHHHHHHhc--CCCC-chHHHHHHHHHH
Q psy1866 37 GDDVQQLCEAG--EEEFLEIMALVG--MASK-PLHVRRLQKALQ 75 (235)
Q Consensus 37 gDdvqql~~~~--e~efleim~lvG--M~~K-PlHVrRlqkal~ 75 (235)
|...++++.+. .++|.|||.++- +..| +=+-|+.-|||.
T Consensus 29 ~~~m~eIa~~T~~~~~~~eIm~~l~kRL~d~~~k~WR~vyKaL~ 72 (150)
T 3onk_A 29 STLMDQISQGTYNFREREEILSMIFRRFTEKAGSEWRQIYKALQ 72 (150)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHcccccchHHHHHHHHH
Confidence 34456677664 789999999875 4444 457888888875
No 77
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=22.51 E-value=1.1e+02 Score=27.79 Aligned_cols=53 Identities=23% Similarity=0.291 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHHc------CCchHHHHHhhChHHHHHHHH--------HhcCCCCchHHHHHHHHHHHH
Q psy1866 23 ASLLAYYDTLLEM------GGDDVQQLCEAGEEEFLEIMA--------LVGMASKPLHVRRLQKALQEW 77 (235)
Q Consensus 23 AnLl~Yyd~~i~~------GgDdvqql~~~~e~efleim~--------lvGM~~KPlHVrRlqkal~~w 77 (235)
++.+.|..+|+.- ..|.|++|.++ =.+|..+++ +++..-+|+|- +|.+..+++
T Consensus 349 ~G~~~y~~~Fl~~~~~~~~~~~~v~~Lk~~-~~~~~~~~~~~L~lh~~~~~~~~~~~h~-~le~~f~~l 415 (428)
T 2wm9_A 349 AGPLAYARAFLDDTNTKRYPDNKVKLLKEV-FRQFVEACGQALAVNERLIKEDQLEYQE-EMKANYREM 415 (428)
T ss_dssp CCTHHHHHHHSCC-------CTTHHHHHHH-HHHHHHHHHHHHHHHHHHCCSTTTHHHH-HHHHHHHHH
T ss_pred CcHHHHHHHHcCCcccccCCHHHHHHHHHH-HHHHHHHHHHHHHHhhhhCChhHHHHHH-HHHHHHHHH
Confidence 3688999999853 45778899887 456666654 67788899994 344444443
No 78
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=22.37 E-value=1.4e+02 Score=21.16 Aligned_cols=52 Identities=15% Similarity=0.261 Sum_probs=34.3
Q ss_pred hhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHhc----CCCCchHHHHHHHHHHHHh
Q psy1866 22 RASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVG----MASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 22 rAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lvG----M~~KPlHVrRlqkal~~w~ 78 (235)
+..|-..|+.|++.-||- ....+||..+|..+| .....-.+++|+.++..|.
T Consensus 7 ~~~l~~~F~~~~D~d~dG-----~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ 62 (185)
T 2sas_A 7 KQKIKFTFDFFLDMNHDG-----SIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEW 62 (185)
T ss_dssp HHHHHHHHHHHTCTTCSS-----EECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHheeCCCCC-----eEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 445666677664444442 245678888888877 7667777888877766664
No 79
>1d2z_B Death domain of tube; six-helix bundle, linear array of death domains, plastic interfaces, apoptosis; HET: EPE; 2.00A {Drosophila melanogaster} SCOP: a.77.1.2
Probab=21.41 E-value=1.1e+02 Score=25.53 Aligned_cols=16 Identities=25% Similarity=0.607 Sum_probs=12.6
Q ss_pred chHHHHHHH--------------HHHHHhc
Q psy1866 64 PLHVRRLQK--------------ALQEWTT 79 (235)
Q Consensus 64 PlHVrRlqk--------------al~~w~~ 79 (235)
-.||++++. -|.||.+
T Consensus 68 ~~~i~~ie~~~~r~~~~~Spt~~lLdeWGT 97 (153)
T 1d2z_B 68 AQDVFQIDEAANRLPPDQSKSQMMIDEWKT 97 (153)
T ss_dssp HHHHHHHHHHHHHSCTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHhcc
Confidence 358988875 5889998
No 80
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=20.65 E-value=54 Score=22.49 Aligned_cols=27 Identities=19% Similarity=0.169 Sum_probs=19.8
Q ss_pred cCCCCchHHHHHHHHHHHHhcCCCCcc
Q psy1866 59 GMASKPLHVRRLQKALQEWTTNPAMFQ 85 (235)
Q Consensus 59 GM~~KPlHVrRlqkal~~w~~~p~~Fq 85 (235)
|.-.||+....|..+|+.+.....-+.
T Consensus 118 ~~l~KP~~~~~L~~~i~~~~~~~~~~~ 144 (146)
T 3ilh_A 118 YYVSKPLTANALNNLYNKVLNEGHHHH 144 (146)
T ss_dssp EEECSSCCHHHHHHHHHHHHCC-----
T ss_pred eeeeCCCCHHHHHHHHHHHHHhccCCC
Confidence 367899999999999999988766543
No 81
>1ci4_A Protein (barrier-TO-autointegration factor (BAF) ); DNA binding protein, retroviral integration, preintegration complex; 1.90A {Homo sapiens} SCOP: a.60.5.1 PDB: 1qck_A 2bzf_A 2ezx_A 2ezy_A 2ezz_A 2odg_A
Probab=20.58 E-value=1.5e+02 Score=22.70 Aligned_cols=39 Identities=28% Similarity=0.434 Sum_probs=30.3
Q ss_pred HHHHHcCCchHHHHHhhChHHHHHHHHHh-cCCCCchHHHHHHHHHHHHhc
Q psy1866 30 DTLLEMGGDDVQQLCEAGEEEFLEIMALV-GMASKPLHVRRLQKALQEWTT 79 (235)
Q Consensus 30 d~~i~~GgDdvqql~~~~e~efleim~lv-GM~~KPlHVrRlqkal~~w~~ 79 (235)
-.|+-++.| ++.|.+-|.-+ |..+| |-+---..|+||..
T Consensus 47 GqFL~l~kd---------~~~F~~WLk~~~gan~k--q~~dc~~cl~eWc~ 86 (89)
T 1ci4_A 47 GQFLVLKKD---------EDLFREWLKDTCGANAK--QSRDCFGCLREWCD 86 (89)
T ss_dssp HHHHHTTTC---------HHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHH
T ss_pred HHHHHcCCC---------HHHHHHHHHHHhCcCHH--HHHHHHHHHHHHHH
Confidence 345556665 88999999888 99988 66667789999964
No 82
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=20.23 E-value=1.9e+02 Score=20.99 Aligned_cols=53 Identities=13% Similarity=0.167 Sum_probs=36.9
Q ss_pred HhhhhHHHHHHHHHcCCchHHHHHhhChHHHHHHHHHh----cCCCCchHHHHHHHHHHHHh
Q psy1866 21 QRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALV----GMASKPLHVRRLQKALQEWT 78 (235)
Q Consensus 21 qrAnLl~Yyd~~i~~GgDdvqql~~~~e~efleim~lv----GM~~KPlHVrRlqkal~~w~ 78 (235)
+++.|...|+.|++..||- ....+||..++.-+ |.....-.++++.+++..|.
T Consensus 10 ~~~~l~~~F~~~~D~d~dG-----~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~ 66 (191)
T 2ccm_A 10 QRNKILRVFNTFYDCNHDG-----VIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIW 66 (191)
T ss_dssp HHHHHHHHHHHHTCTTCSS-----EECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccccCCCCC-----eeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 3455667788775655653 24578888888887 88777778888876666553
Done!