Query psy1868
Match_columns 108
No_of_seqs 138 out of 1073
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 18:22:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1868.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1868hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4do4_A Alpha-N-acetylgalactosa 100.0 2.3E-35 7.8E-40 233.0 6.9 90 18-108 1-90 (400)
2 3hg3_A Alpha-galactosidase A; 100.0 1.3E-33 4.3E-38 228.8 7.4 91 18-108 1-91 (404)
3 3lrk_A Alpha-galactosidase 1; 100.0 1.2E-31 4E-36 221.1 6.3 94 4-108 8-101 (479)
4 1uas_A Alpha-galactosidase; TI 100.0 4.1E-29 1.4E-33 197.5 6.8 81 18-108 1-81 (362)
5 1szn_A Alpha-galactosidase; (b 99.9 4.1E-28 1.4E-32 196.1 5.7 82 17-108 2-84 (417)
6 3a5v_A Alpha-galactosidase; be 99.9 7.3E-28 2.5E-32 193.3 6.7 80 19-108 2-81 (397)
7 3cc1_A BH1870 protein, putativ 99.9 6E-27 2E-31 189.6 6.2 82 16-108 2-101 (433)
8 3a21_A Putative secreted alpha 99.9 1.7E-26 5.9E-31 193.0 5.7 80 19-108 5-84 (614)
9 4fnq_A Alpha-galactosidase AGA 99.8 1.1E-20 3.7E-25 161.3 5.7 72 22-108 325-399 (729)
10 2xn2_A Alpha-galactosidase; hy 99.7 3.7E-18 1.3E-22 145.9 6.6 70 23-108 330-403 (732)
11 3mi6_A Alpha-galactosidase; NE 99.7 4E-18 1.4E-22 146.5 5.7 72 22-108 326-400 (745)
12 2yfo_A Alpha-galactosidase-suc 99.7 2.9E-18 1E-22 146.4 3.6 71 23-108 326-399 (720)
13 1zy9_A Alpha-galactosidase; TM 99.6 1.3E-16 4.6E-21 133.1 4.9 68 21-108 190-257 (564)
14 2f2h_A Putative family 31 gluc 98.0 8.2E-06 2.8E-10 70.3 6.6 70 21-107 259-332 (773)
15 2g3m_A Maltase, alpha-glucosid 97.7 5.7E-05 2E-09 64.2 6.2 50 50-107 187-236 (693)
16 4ba0_A Alpha-glucosidase, puta 97.2 0.00064 2.2E-08 58.9 6.4 53 51-107 275-328 (817)
17 3lpp_A Sucrase-isomaltase; gly 97.0 0.00074 2.5E-08 59.2 4.9 50 50-107 330-379 (898)
18 2xvl_A Alpha-xylosidase, putat 96.8 0.0013 4.4E-08 58.5 5.5 52 50-107 445-496 (1020)
19 3l4y_A Maltase-glucoamylase, i 96.8 0.0016 5.4E-08 57.0 5.9 50 50-107 302-351 (875)
20 3nsx_A Alpha-glucosidase; stru 96.8 0.0013 4.5E-08 55.8 4.7 49 51-107 176-224 (666)
21 3a24_A Alpha-galactosidase; gl 96.2 0.0059 2E-07 51.9 5.3 49 50-108 306-354 (641)
22 3top_A Maltase-glucoamylase, i 93.3 0.059 2E-06 47.5 3.8 48 51-107 304-351 (908)
23 2x2h_A Alpha-1,4-glucan lyase 76.3 0.81 2.8E-05 40.7 1.2 42 51-99 377-418 (1027)
24 2d73_A Alpha-glucosidase SUSB; 52.9 13 0.00044 32.2 4.0 29 50-83 368-399 (738)
25 3rpd_A Methionine synthase (B1 42.9 10 0.00036 29.5 1.8 31 51-81 162-194 (357)
26 2knq_A General secretion pathw 41.2 43 0.0015 22.3 4.5 14 67-80 42-55 (142)
27 3eau_A Voltage-gated potassium 36.3 29 0.00099 25.8 3.3 43 24-81 14-56 (327)
28 1t6s_A Conserved hypothetical 34.4 39 0.0013 23.5 3.5 39 50-89 36-76 (162)
29 3lut_A Voltage-gated potassium 34.3 32 0.0011 26.2 3.3 43 24-81 48-90 (367)
30 4gac_A Alcohol dehydrogenase [ 30.5 21 0.00072 26.4 1.7 39 16-75 5-43 (324)
31 3hcz_A Possible thiol-disulfid 30.4 55 0.0019 20.0 3.5 35 29-79 38-72 (148)
32 3erp_A Putative oxidoreductase 30.2 39 0.0013 25.6 3.2 43 24-81 45-87 (353)
33 4hd5_A Polysaccharide deacetyl 28.8 54 0.0019 25.8 3.8 35 49-83 164-210 (360)
34 4h51_A Aspartate aminotransfer 28.6 66 0.0023 25.0 4.3 37 42-84 199-235 (420)
35 2jvf_A De novo protein M7; tet 28.5 38 0.0013 21.3 2.4 27 51-78 58-84 (96)
36 1rzw_A Protein AF2095(GR4); be 28.2 64 0.0022 21.5 3.6 29 51-83 57-85 (123)
37 3n6q_A YGHZ aldo-keto reductas 27.6 46 0.0016 24.9 3.2 43 24-81 24-66 (346)
38 2f2l_A Peptidoglycan-recogniti 27.2 79 0.0027 21.7 4.1 19 64-82 57-75 (167)
39 1wdd_S Ribulose bisphosphate c 26.9 75 0.0026 21.6 3.8 29 50-81 21-49 (128)
40 1w79_A D-alanyl-D-alanine carb 26.4 78 0.0027 25.5 4.5 38 46-85 94-132 (489)
41 1gk8_I Ribulose bisphosphate c 25.8 77 0.0026 21.9 3.7 29 50-81 21-49 (140)
42 2lju_A Putative oxidoreductase 25.4 79 0.0027 20.8 3.6 43 24-79 46-88 (108)
43 3v39_A D-alanyl-D-alanine carb 25.4 84 0.0029 25.1 4.4 36 46-83 76-111 (418)
44 7aat_A Aspartate aminotransfer 25.2 1E+02 0.0034 22.6 4.6 37 42-84 184-220 (401)
45 1byi_A Dethiobiotin synthase; 24.8 58 0.002 22.0 3.0 10 71-80 108-117 (224)
46 1wv9_A Rhodanese homolog TT165 24.2 23 0.00079 21.2 0.8 17 67-83 73-89 (94)
47 3ep1_A PGRP-HD - peptidoglycan 23.9 36 0.0012 24.1 1.8 26 56-81 63-89 (176)
48 1w5d_A Penicillin-binding prot 23.8 87 0.003 24.9 4.3 37 46-84 97-134 (462)
49 3iwh_A Rhodanese-like domain p 23.6 27 0.00092 21.8 1.0 16 67-82 76-91 (103)
50 3foj_A Uncharacterized protein 23.2 28 0.00095 21.1 1.0 17 67-83 76-92 (100)
51 1yzs_A Sulfiredoxin; PARB doma 22.5 79 0.0027 21.1 3.2 19 50-68 41-59 (121)
52 3ppg_A 5-methyltetrahydroptero 22.2 49 0.0017 28.8 2.6 31 52-82 608-640 (789)
53 1rbl_M Ribulose 1,5 bisphospha 22.2 64 0.0022 21.2 2.7 30 50-82 20-49 (109)
54 4e8j_A Lincosamide resistance 22.1 65 0.0022 22.6 2.9 29 49-83 5-33 (161)
55 3eme_A Rhodanese-like domain p 21.8 28 0.00096 21.1 0.8 17 67-83 76-92 (103)
56 4eu1_A Mitochondrial aspartate 21.4 1.3E+02 0.0045 22.1 4.6 37 42-84 192-228 (409)
57 1svd_M Ribulose bisphosphate c 21.3 74 0.0025 21.0 2.8 30 50-82 22-51 (110)
58 3gk5_A Uncharacterized rhodane 20.7 29 0.001 21.5 0.7 16 67-82 75-90 (108)
59 2h62_A BMP-2, BMP-2A, bone mor 20.5 17 0.00058 23.8 -0.5 18 28-45 26-50 (114)
60 3q9l_A Septum site-determining 20.5 92 0.0031 21.4 3.4 26 50-80 97-122 (260)
61 4f4e_A Aromatic-amino-acid ami 20.4 1.2E+02 0.0042 22.4 4.3 37 42-84 204-240 (420)
62 1ypx_A Putative vitamin-B12 in 20.4 64 0.0022 24.9 2.8 30 52-81 159-190 (375)
63 4gqr_A Pancreatic alpha-amylas 20.3 78 0.0027 23.9 3.2 22 51-78 75-96 (496)
64 2fsx_A RV0390, COG0607: rhodan 20.0 66 0.0023 20.8 2.4 17 67-83 100-117 (148)
No 1
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=100.00 E-value=2.3e-35 Score=233.00 Aligned_cols=90 Identities=60% Similarity=1.241 Sum_probs=86.8
Q ss_pred ccCCCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCC
Q psy1868 18 LDNGVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAK 97 (108)
Q Consensus 18 ~~~~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~ 97 (108)
++||+++|||||||||++|+|++++...+..+++|+.|+++||.|+++||+++||+||+|||||+. .||++|+|++|++
T Consensus 1 l~ngla~tPpmGWnSW~~~~~~i~~~~~~~~~~se~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~-~rd~~G~~~~d~~ 79 (400)
T 4do4_A 1 LDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIG-GRDASGRLMPDPK 79 (400)
T ss_dssp CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHSSHHHHTCCEEECCSSCEE-EECTTCCEEECTT
T ss_pred CCCCcCCCCCCcccchHhhccccCccccccccccHHHHHHHHHHHHHCcchhhCCeEEEECCCccc-CCCCCCCEeECcc
Confidence 689999999999999999999999999999999999999999999999999999999999999996 7999999999999
Q ss_pred CCCCChhhhhC
Q psy1868 98 RFPRGIADLSN 108 (108)
Q Consensus 98 rFP~G~k~Lad 108 (108)
|||+|||+|+|
T Consensus 80 rFP~G~k~lad 90 (400)
T 4do4_A 80 RFPHGIPFLAD 90 (400)
T ss_dssp TSTTCHHHHHH
T ss_pred cCCcccHHHHH
Confidence 99999999985
No 2
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=100.00 E-value=1.3e-33 Score=228.78 Aligned_cols=91 Identities=62% Similarity=1.240 Sum_probs=88.3
Q ss_pred ccCCCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCC
Q psy1868 18 LDNGVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAK 97 (108)
Q Consensus 18 ~~~~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~ 97 (108)
++|+++++||||||||++|+|+++|.++|..||||+.|+++||.|+++||+++||+||+|||||+...||.+|+|++|++
T Consensus 1 l~ngla~tppmGWnsW~~~~~~~d~~~~~~~~i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~ 80 (404)
T 3hg3_A 1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 80 (404)
T ss_dssp CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTT
T ss_pred CCCCCCCCCceEEEcHhhhccCccccccccCCcCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChh
Confidence 57999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCChhhhhC
Q psy1868 98 RFPRGIADLSN 108 (108)
Q Consensus 98 rFP~G~k~Lad 108 (108)
|||+|||+|+|
T Consensus 81 kFP~Gl~~l~~ 91 (404)
T 3hg3_A 81 RFPHGIRQLAN 91 (404)
T ss_dssp TSTTHHHHHHH
T ss_pred hcCCCHHHHHH
Confidence 99999999975
No 3
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=99.97 E-value=1.2e-31 Score=221.06 Aligned_cols=94 Identities=36% Similarity=0.738 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEecccccc
Q psy1868 4 AGLLVASLVAVSKALDNGVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLD 83 (108)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~ 83 (108)
+++++++++..+.+++|+++++||||||||++|+|+ |||+.|+++||.|++.||+++||+||+|||||+.
T Consensus 8 ~~~~~~~~~~~~~a~~ngla~tPpmGWNSW~~~~~~----------i~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~ 77 (479)
T 3lrk_A 8 TACISLKGVFGVSPSYNGLGLTPQMGWDNWNTFACD----------VSEQLLLDTADRISDLGLKDMGYKYIILDDCWSS 77 (479)
T ss_dssp -----------CCCCSSSCCSSCCEEEESHHHHTTC----------CCHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEE
T ss_pred HHHHHHHhhhhhhhhhCCCCCCCceEEEchHhhCcC----------CCHHHHHHHHHHHHhcCccccCceEEEECCcccc
Confidence 455666667788899999999999999999999999 9999999999999999999999999999999997
Q ss_pred CCCCCCCCeeccCCCCCCChhhhhC
Q psy1868 84 KTRSFNGRLQADAKRFPRGIADLSN 108 (108)
Q Consensus 84 ~~rd~~G~~~~d~~rFP~G~k~Lad 108 (108)
.||.+|+|++|++|||+|||+|+|
T Consensus 78 -~rd~~G~~~~d~~kFP~Glk~Lad 101 (479)
T 3lrk_A 78 -GRDSDGFLVADEQKFPNGMGHVAD 101 (479)
T ss_dssp -EECTTSCEEECTTTCTTCHHHHHH
T ss_pred -ccCCCCCEecChhhcCCCHHHHHH
Confidence 799999999999999999999985
No 4
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=99.95 E-value=4.1e-29 Score=197.46 Aligned_cols=81 Identities=42% Similarity=0.976 Sum_probs=77.7
Q ss_pred ccCCCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCC
Q psy1868 18 LDNGVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAK 97 (108)
Q Consensus 18 ~~~~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~ 97 (108)
++|+++++||||||||++|+|+ +||+.|++.||.|++.||+++||+||+|||||+...||.+|+|++|++
T Consensus 1 ~~~~~~~~pp~gwnsW~~~~~~----------~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~ 70 (362)
T 1uas_A 1 FENGLGRTPQMGWNSWNHFYCG----------INEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQ 70 (362)
T ss_dssp CCSSCCSSCCEEEESHHHHTTC----------CCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTT
T ss_pred CCCCCCCCCCEEEECHHHHCCC----------CCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChh
Confidence 4789999999999999999999 999999999999999999999999999999999878999999999999
Q ss_pred CCCCChhhhhC
Q psy1868 98 RFPRGIADLSN 108 (108)
Q Consensus 98 rFP~G~k~Lad 108 (108)
|||+|||+|+|
T Consensus 71 ~FP~Gl~~l~~ 81 (362)
T 1uas_A 71 TFPSGIKALAD 81 (362)
T ss_dssp TCTTCHHHHHH
T ss_pred ccCccHHHHHH
Confidence 99999999975
No 5
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=99.94 E-value=4.1e-28 Score=196.08 Aligned_cols=82 Identities=39% Similarity=0.918 Sum_probs=78.4
Q ss_pred hccCC-CCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeecc
Q psy1868 17 ALDNG-VALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQAD 95 (108)
Q Consensus 17 ~~~~~-~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d 95 (108)
.++|| ++++||||||||++|+|+ +||+.|+++||.|++.||+++||+||+|||||+...||..|+|++|
T Consensus 2 ~~~ng~~~~~ppmgwnsW~~~~~~----------~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~ 71 (417)
T 1szn_A 2 VMPDGVTGKVPSLGWNSWNAYHCD----------IDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPN 71 (417)
T ss_dssp CCTTSSTTTSCCEEEESHHHHTTC----------CCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBC
T ss_pred cccCCccCCCCCEEEEchHhhCcC----------CCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEEC
Confidence 46899 999999999999999999 9999999999999999999999999999999998878889999999
Q ss_pred CCCCCCChhhhhC
Q psy1868 96 AKRFPRGIADLSN 108 (108)
Q Consensus 96 ~~rFP~G~k~Lad 108 (108)
++|||+|||+|+|
T Consensus 72 ~~kFP~Gl~~l~~ 84 (417)
T 1szn_A 72 ATRFPDGIDGLAK 84 (417)
T ss_dssp TTTCTTHHHHHHH
T ss_pred cccCCcCHHHHHH
Confidence 9999999999975
No 6
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=99.94 E-value=7.3e-28 Score=193.35 Aligned_cols=80 Identities=43% Similarity=0.939 Sum_probs=77.1
Q ss_pred cCCCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCC
Q psy1868 19 DNGVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKR 98 (108)
Q Consensus 19 ~~~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~r 98 (108)
+|+++++||||||||++|+|+ +||+.|+++||.|++.||+++||+||+|||||+...||.+|+|++|++|
T Consensus 2 ~~gla~~pp~gwnsW~~~~~~----------~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~k 71 (397)
T 3a5v_A 2 NNGLAITPQMGWNTWNKYGCN----------VDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTK 71 (397)
T ss_dssp CSSCCSSCCEEEESHHHHGGG----------CCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTT
T ss_pred CCCcCCCCCEEEECHHHhCcC----------CCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhc
Confidence 689999999999999999999 9999999999999999999999999999999998789999999999999
Q ss_pred CCCChhhhhC
Q psy1868 99 FPRGIADLSN 108 (108)
Q Consensus 99 FP~G~k~Lad 108 (108)
||+|||+|+|
T Consensus 72 FP~Gl~~l~~ 81 (397)
T 3a5v_A 72 FPRGIKPLVD 81 (397)
T ss_dssp CTTCHHHHHH
T ss_pred CCcCHHHHHH
Confidence 9999999974
No 7
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=99.93 E-value=6e-27 Score=189.64 Aligned_cols=82 Identities=32% Similarity=0.629 Sum_probs=76.4
Q ss_pred hhccCCCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccC-----------
Q psy1868 16 KALDNGVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDK----------- 84 (108)
Q Consensus 16 ~~~~~~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~----------- 84 (108)
.+++|+++++||||||||++|+|+ |||+.|+++||.| +.||+++||+||+|||||+..
T Consensus 2 ~~~~~~~~~~pp~gwnsW~~~~~~----------i~e~~i~~~ad~~-~~gl~~~G~~~~~iDDgW~~~~~~~~~y~~~~ 70 (433)
T 3cc1_A 2 MEVNRLSALTPPMGWNSWDCYGAS----------VTEEEVLGNAEYM-ANHLKKYGWEYIVVDIQWYEPTANSSAYNPFA 70 (433)
T ss_dssp CCCSCBTTBCCCEEEESHHHHTTC----------CCHHHHHHHHHHH-HHHTGGGTCCEEEECSCTTCCCTTSTTCCTTS
T ss_pred ccccCCCCCCCCEEEEChhhhCCc----------CCHHHHHHHHHHH-HhcchhhCCeEEEECCCcCCCCCccccccccc
Confidence 367899999999999999999999 9999999999999 899999999999999999975
Q ss_pred --CCCCCCCeeccCCCCCC-----ChhhhhC
Q psy1868 85 --TRSFNGRLQADAKRFPR-----GIADLSN 108 (108)
Q Consensus 85 --~rd~~G~~~~d~~rFP~-----G~k~Lad 108 (108)
.||+.|+|++|++|||+ |||+|+|
T Consensus 71 ~~~~d~~G~~~~~~~kFP~~~~~~Gl~~l~~ 101 (433)
T 3cc1_A 71 PLCMDEYGRLLPATNRFPSAKNGAGFKPLSD 101 (433)
T ss_dssp CSCBCTTSCBCCCTTTCGGGTTTTTTHHHHH
T ss_pred ccccCCCCCEeECCccCCCcccCCCHHHHHH
Confidence 35678999999999999 9999975
No 8
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=99.93 E-value=1.7e-26 Score=193.00 Aligned_cols=80 Identities=31% Similarity=0.712 Sum_probs=76.4
Q ss_pred cCCCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCC
Q psy1868 19 DNGVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKR 98 (108)
Q Consensus 19 ~~~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~r 98 (108)
.+.++++||||||||++|+|+ +||+.|+++||.|++.||+++||+||+|||||+...||.+|+|++|++|
T Consensus 5 ~~~~~~~~p~gwnsw~~~~~~----------~~~~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~g~~~~~~~~ 74 (614)
T 3a21_A 5 RQITVPSAPMGWASWNSFAAK----------IDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSAGNITVDTAE 74 (614)
T ss_dssp EECCCCCCCEEEESHHHHTTC----------CCHHHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTTCCBCCCTTT
T ss_pred ccccCCCCceEEEchhhhCcc----------CCHHHHHHHHHHHHHcCHHhhCCEEEEECCCcCCCCcCCCCCEEECccc
Confidence 467899999999999999999 9999999999999999999999999999999998789999999999999
Q ss_pred CCCChhhhhC
Q psy1868 99 FPRGIADLSN 108 (108)
Q Consensus 99 FP~G~k~Lad 108 (108)
||+|||+|+|
T Consensus 75 fP~gl~~l~~ 84 (614)
T 3a21_A 75 WPGGMSAITA 84 (614)
T ss_dssp STTCHHHHHH
T ss_pred cCCcHHHHHH
Confidence 9999999975
No 9
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=99.81 E-value=1.1e-20 Score=161.32 Aligned_cols=72 Identities=21% Similarity=0.400 Sum_probs=63.9
Q ss_pred CCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCC---CCCCeeccCCC
Q psy1868 22 VALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRS---FNGRLQADAKR 98 (108)
Q Consensus 22 ~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd---~~G~~~~d~~r 98 (108)
..+.+||+||||++++|+ +||++|+++||.++ ++||+||+|||||+...++ ..|+|++|++|
T Consensus 325 ~~~~rPv~~NsW~a~~~d----------~~e~~i~~~ad~aa-----~lG~e~fviDDGWf~~r~~d~~~lGdW~~d~~k 389 (729)
T 4fnq_A 325 RDRERPILINNWEATYFD----------FNEEKLVNIAKTEA-----ELGIELFVLDDGWFGKRDDDRRSLGDWIVNRRK 389 (729)
T ss_dssp TTSCCCCEEECSTTTTTC----------CCHHHHHHHHHHHH-----HHTCCEEEECSCCBTTCCSTTSCTTCCSBCTTT
T ss_pred cccCceeEEccccccccc----------CCHHHHHHHHHHHH-----hcCccEEEEcceeecCCCCCcccCCcEEEChhh
Confidence 356789999999999999 99999999999974 6899999999999975443 44999999999
Q ss_pred CCCChhhhhC
Q psy1868 99 FPRGIADLSN 108 (108)
Q Consensus 99 FP~G~k~Lad 108 (108)
||+|||+|+|
T Consensus 390 FP~Glk~Lad 399 (729)
T 4fnq_A 390 LPNGLDGLAK 399 (729)
T ss_dssp CTTHHHHHHH
T ss_pred cCccHHHHHH
Confidence 9999999985
No 10
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=99.72 E-value=3.7e-18 Score=145.91 Aligned_cols=70 Identities=24% Similarity=0.482 Sum_probs=62.5
Q ss_pred CCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCC----CCCCeeccCCC
Q psy1868 23 ALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRS----FNGRLQADAKR 98 (108)
Q Consensus 23 ~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd----~~G~~~~d~~r 98 (108)
.++||||||||++++|+ +||+.|++.||.++ ++||+||+|||||+.. |+ ..|+|.+|++|
T Consensus 330 ~~~~p~~wnsW~~~~~~----------~~ee~v~~~ad~~~-----~~G~~~~viDDGW~~~-r~~~~~~~Gd~~~d~~k 393 (732)
T 2xn2_A 330 DQIRPVLVNNWEATYFD----------FNEDKLKTIVDKAK-----KLGLEMFVLDDGWFGH-RDDDNSSLGDWKVYKKK 393 (732)
T ss_dssp TSCCCCEEECHHHHTTC----------CCHHHHHHHHHHHH-----HTTCCEEEECSSSBTT-CSSTTSCTTCCSBCTTT
T ss_pred cCCCCeEEEchhhhccC----------CCHHHHHHHHHHHH-----HcCCcEEEEcCccccc-CCCCccccCceeeCchh
Confidence 57899999999999998 99999999999974 6789999999999964 54 34999999999
Q ss_pred CCCChhhhhC
Q psy1868 99 FPRGIADLSN 108 (108)
Q Consensus 99 FP~G~k~Lad 108 (108)
||+|||+|++
T Consensus 394 FP~Glk~lv~ 403 (732)
T 2xn2_A 394 FPNGLGHFAD 403 (732)
T ss_dssp CTTCHHHHHH
T ss_pred cCccHHHHHH
Confidence 9999999874
No 11
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=99.72 E-value=4e-18 Score=146.47 Aligned_cols=72 Identities=24% Similarity=0.426 Sum_probs=63.1
Q ss_pred CCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCC---CCCCCeeccCCC
Q psy1868 22 VALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTR---SFNGRLQADAKR 98 (108)
Q Consensus 22 ~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~r---d~~G~~~~d~~r 98 (108)
..++||||||||++++|+ +||+.|++.|+.++ ++||++|+|||||+...+ +..|+|.+|++|
T Consensus 326 ~~~~~P~~wNsW~~~~~d----------~tee~il~~ad~~~-----~~G~e~fviDDGW~~~r~~d~~~~Gdw~~d~~k 390 (745)
T 3mi6_A 326 AHEERPVLINNWEATYFD----------FNEAKLMTIVNQAK-----RLGIEMFVLDDGWFGHRDDDTTSLGDWFVDQRK 390 (745)
T ss_dssp TTSCCCCEEECHHHHTTC----------CCHHHHHHHHHHHH-----HHTCCEEEECTTCBTTCSSTTSCTTCCSBCTTT
T ss_pred cCCCCceEEEchHhhCcC----------CCHHHHHHHHHHHH-----HcCCcEEEECcccccCCCCCcccCCCceeChhh
Confidence 457899999999999998 99999999999974 678899999999997432 346999999999
Q ss_pred CCCChhhhhC
Q psy1868 99 FPRGIADLSN 108 (108)
Q Consensus 99 FP~G~k~Lad 108 (108)
||+||+.|++
T Consensus 391 FP~Gl~~lv~ 400 (745)
T 3mi6_A 391 FPDGIEHFSQ 400 (745)
T ss_dssp CTTHHHHHHH
T ss_pred cCccHHHHHH
Confidence 9999999864
No 12
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=99.71 E-value=2.9e-18 Score=146.42 Aligned_cols=71 Identities=20% Similarity=0.381 Sum_probs=62.2
Q ss_pred CCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCC---CCCCCeeccCCCC
Q psy1868 23 ALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTR---SFNGRLQADAKRF 99 (108)
Q Consensus 23 ~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~r---d~~G~~~~d~~rF 99 (108)
.++||||||||++++|+ +||+.|++.||.++ ++||++|+|||||+...+ +..|+|.+|++||
T Consensus 326 ~~~~p~~~nsW~~~~~~----------~~e~~i~~~ad~~~-----~~G~~~~viDDgW~~~r~~~~~~~Gdw~~d~~kF 390 (720)
T 2yfo_A 326 HMQRPVLINSWEAAYFD----------FTGDTIVDLAKEAA-----SLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKL 390 (720)
T ss_dssp GSCCCCEEEHHHHHTTC----------CCHHHHHHHHHHHH-----HHTCCEEEECSSSBTTCSSTTSCTTCCSBCHHHH
T ss_pred CCCCCeEEEchHHhCcC----------CCHHHHHHHHHHHH-----HcCCcEEEECcccccCCCcccccCCCCeeChhhc
Confidence 36899999999999998 99999999999974 678899999999996432 3459999999999
Q ss_pred CCChhhhhC
Q psy1868 100 PRGIADLSN 108 (108)
Q Consensus 100 P~G~k~Lad 108 (108)
|+|||+|++
T Consensus 391 P~Glk~lvd 399 (720)
T 2yfo_A 391 GGSLAELIT 399 (720)
T ss_dssp TSCHHHHHH
T ss_pred CccHHHHHH
Confidence 999999874
No 13
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=99.63 E-value=1.3e-16 Score=133.12 Aligned_cols=68 Identities=19% Similarity=0.385 Sum_probs=62.1
Q ss_pred CCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCCC
Q psy1868 21 GVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFP 100 (108)
Q Consensus 21 ~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rFP 100 (108)
..+++||||||||++++|+ +||+.|+++|+.|+ ++||++|+|||||+. ..|+|.+|++|||
T Consensus 190 ~w~~~~P~gwnsW~~~~~~----------~te~~v~~~ad~~~-----~~G~~~~~IDdgW~~----~~Gdw~~d~~kFP 250 (564)
T 1zy9_A 190 RVPKHTPTGWCSWYHYFLD----------LTWEETLKNLKLAK-----NFPFEVFQIDDAYEK----DIGDWLVTRGDFP 250 (564)
T ss_dssp CCCSSCCEEEESHHHHGGG----------CCHHHHHHHHHHGG-----GTTCSEEEECTTSEE----ETTEEEEECTTCC
T ss_pred ccccCCceEEcchhccCcC----------CCHHHHHHHHHHHH-----hcCCcEEEECccccc----ccCCcccCcccCC
Confidence 3478899999999999999 89999999999985 799999999999997 3799999999999
Q ss_pred CChhhhhC
Q psy1868 101 RGIADLSN 108 (108)
Q Consensus 101 ~G~k~Lad 108 (108)
+ |++|++
T Consensus 251 ~-lk~lvd 257 (564)
T 1zy9_A 251 S-VEEMAK 257 (564)
T ss_dssp C-HHHHHH
T ss_pred C-HHHHHH
Confidence 9 999874
No 14
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=98.02 E-value=8.2e-06 Score=70.26 Aligned_cols=70 Identities=21% Similarity=0.388 Sum_probs=52.9
Q ss_pred CCCCCCce---e-eechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccC
Q psy1868 21 GVALTPPM---G-WLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADA 96 (108)
Q Consensus 21 ~~~~~Ppm---G-WnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~ 96 (108)
|....||. | |.|+. |+++ .+|+.|++.++.+.+.|+. ++.|+||++|+.. ...+++.+|+
T Consensus 259 G~p~lpP~walG~w~s~~-y~~~----------y~e~~v~~v~~~~r~~~IP---~dvi~lD~~w~~~--~~w~dft~d~ 322 (773)
T 2f2h_A 259 GRPALPPAWSFGLWLTTS-FTTN----------YDEATVNSFIDGMAERNLP---LHVFHFDCFWMKA--FQWCDFEWDP 322 (773)
T ss_dssp CCCCCCCGGGGSEEEECC-SSSC----------CCHHHHHHHHHHHHHTTCC---CCEEEECGGGBCT--TCCSSCCBCT
T ss_pred cccccCCccccCcEEecc-ccCC----------CCHHHHHHHHHHHHHcCCC---eeEEEECcccccc--cccccceECh
Confidence 44456666 4 66663 4445 6899999999999887665 7999999999963 1246899999
Q ss_pred CCCCCChhhhh
Q psy1868 97 KRFPRGIADLS 107 (108)
Q Consensus 97 ~rFP~G~k~La 107 (108)
+|||+ .+.++
T Consensus 323 ~~FPd-p~~mv 332 (773)
T 2f2h_A 323 LTFPD-PEGMI 332 (773)
T ss_dssp TTCSC-HHHHH
T ss_pred hhCCC-HHHHH
Confidence 99998 56654
No 15
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=97.68 E-value=5.7e-05 Score=64.23 Aligned_cols=50 Identities=18% Similarity=0.288 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCCCCChhhhh
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 107 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rFP~G~k~La 107 (108)
-||+.|++.++.+.+.|+. ++.|.||++|+.. .+++..|++|||+ ++.++
T Consensus 187 ~~~~ev~~v~~~~~~~~IP---~dvi~lD~~y~~~----~~dft~d~~~FPd-p~~mv 236 (693)
T 2g3m_A 187 YPQDKVVELVDIMQKEGFR---VAGVFLDIHYMDS----YKLFTWHPYRFPE-PKKLI 236 (693)
T ss_dssp CSHHHHHHHHHHHHHTTCC---EEEEEECGGGSBT----TBTTCCCTTTCSC-HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCC---cceEEEecceecC----CccceEChhhCCC-HHHHH
Confidence 4899999999999887665 7999999999863 6789999999998 77665
No 16
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=97.16 E-value=0.00064 Score=58.94 Aligned_cols=53 Identities=26% Similarity=0.430 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHHccccccCceEEEeccccccCC-CCCCCCeeccCCCCCCChhhhh
Q psy1868 51 SERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKT-RSFNGRLQADAKRFPRGIADLS 107 (108)
Q Consensus 51 ~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~-rd~~G~~~~d~~rFP~G~k~La 107 (108)
+++.|++.++.+.+.|+. ++.|.+|++|+... .+..|++..|++|||+ .+.++
T Consensus 275 s~~ev~~vv~~~r~~~IP---~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPd-p~~mv 328 (817)
T 4ba0_A 275 SEAETRATVQKYKTEDFP---LDTIVLDLYWFGKDIKGHMGNLDWDKENFPT-PLDMM 328 (817)
T ss_dssp SHHHHHHHHHHHHHHTCC---CCEEEECGGGSCSSSSSCTTCCSCCTTTCSC-HHHHH
T ss_pred CHHHHHHHHHHHHHhCCC---CcEEEEcccccCCccccccCccccccccCCC-HHHHH
Confidence 899999999999887665 79999999998642 2356899999999998 56554
No 17
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=96.95 E-value=0.00074 Score=59.24 Aligned_cols=50 Identities=10% Similarity=0.158 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCCCCChhhhh
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 107 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rFP~G~k~La 107 (108)
-+++.|++.++.+.+.|+. ++.+.+|++|+.. .+++..|++|||+ ++.++
T Consensus 330 ~s~~ev~~vv~~~r~~~IP---~Dvi~lDidy~~~----~~dFt~D~~~FPd-p~~mv 379 (898)
T 3lpp_A 330 KSLDVVKEVVRRNREAGIP---FDTQVTDIDYMED----KKDFTYDQVAFNG-LPQFV 379 (898)
T ss_dssp CSHHHHHHHHHHHHHTTCC---CCEEEECGGGSST----TCTTCCCTTTTTT-HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCC---ceeeEeccccccC----CCcceEChhhCCC-HHHHH
Confidence 4889999999999887665 7999999999864 5889999999994 77765
No 18
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=96.84 E-value=0.0013 Score=58.51 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCCCCChhhhh
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 107 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rFP~G~k~La 107 (108)
-|++.|++.++.+.+.|+. ++.|.+|++|... +..+++..|++|||+ ++.++
T Consensus 445 ~sq~ev~~va~~~re~gIP---lDvi~lD~~y~~~--~~~~dFtwD~~rFPd-p~~mv 496 (1020)
T 2xvl_A 445 KSSDEIIQNLKEYRDRKIP---IDNIVLDWSYWPE--DAWGSHDFDKQFFPD-PKALV 496 (1020)
T ss_dssp CSHHHHHHHHHHHHHTTCC---CCEEEECSCCSCT--TCTTSCCCCTTTCSC-HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCC---cceEEEecccccc--CcccceEEChhhCCC-HHHHH
Confidence 4889999999999887666 8899999998753 457889999999998 76654
No 19
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=96.82 E-value=0.0016 Score=57.03 Aligned_cols=50 Identities=12% Similarity=0.181 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCCCCChhhhh
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 107 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rFP~G~k~La 107 (108)
-+++.|++.++.+.+.|+. ++.+.+|.+|+.. .+++..|++|||+ ++.++
T Consensus 302 ~s~~ev~~vv~~~r~~~IP---~Dvi~lDidy~~~----~~dFt~D~~~FPd-p~~mv 351 (875)
T 3l4y_A 302 GTLDNMREVVERNRAAQLP---YDVQHADIDYMDE----RRDFTYDSVDFKG-FPEFV 351 (875)
T ss_dssp CSHHHHHHHHHHHHHTTCC---CCEEEECGGGSBT----TBTTCCCTTTTTT-HHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC---CceEEEccchhcC----CCceeeChhhCCC-HHHHH
Confidence 3889999999999887665 7999999999864 5789999999997 77665
No 20
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=96.76 E-value=0.0013 Score=55.77 Aligned_cols=49 Identities=16% Similarity=0.295 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCCCCChhhhh
Q psy1868 51 SERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 107 (108)
Q Consensus 51 ~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rFP~G~k~La 107 (108)
|++.|++.++.+.+.|+. ++.|.+|..|... .+++..|++|||+ ++.++
T Consensus 176 ~~~~v~~v~~~~~~~~IP---~dvi~lD~dy~~~----~~~ft~d~~~FPd-p~~mv 224 (666)
T 3nsx_A 176 TKEDFRAVAKGYRENHIP---IDMIYMDIDYMQD----FKDFTVNEKNFPD-FPEFV 224 (666)
T ss_dssp SHHHHHHHHHHHHHTTCC---CCEEEECGGGSST----TCTTCCCTTTCTT-HHHHH
T ss_pred CHHHHHHHHHHHHhcCCC---cceEEEecHHHHh----hcccccChhhCCC-HHHHH
Confidence 889999999999987666 8999999999864 6789999999997 77664
No 21
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=96.18 E-value=0.0059 Score=51.95 Aligned_cols=49 Identities=18% Similarity=0.433 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCCCCChhhhhC
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSN 108 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rFP~G~k~Lad 108 (108)
+|.+.+++-+|..+ ++||+||+||+||+...++ .-..|++. .+|+.|++
T Consensus 306 ~n~~~~k~yIDfAa-----~~G~~yvlvD~gW~~~~~~--d~~~~~p~---~di~~l~~ 354 (641)
T 3a24_A 306 VNNPTYKAYIDFAS-----ANGIEYVILDEGWAVNLQA--DLMQVVKE---IDLKELVD 354 (641)
T ss_dssp SSHHHHHHHHHHHH-----HTTCCEEEECTTSBCTTSC--CTTCBCTT---CCHHHHHH
T ss_pred CCHHHHHHHHHHHH-----HcCCCEEEEecccccCCCC--CccccCCc---CCHHHHHH
Confidence 79999999999864 6889999999999853232 11355554 37888863
No 22
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=93.34 E-value=0.059 Score=47.46 Aligned_cols=48 Identities=13% Similarity=0.236 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCCCCChhhhh
Q psy1868 51 SERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 107 (108)
Q Consensus 51 ~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rFP~G~k~La 107 (108)
|++.|++.++.+.+.++. ++.+.+|..|... ..++..|+ +||+ ++.++
T Consensus 304 ~~~ev~~vv~~~r~~~IP---lDvi~~Didym~~----~~~FT~d~-~FPd-p~~mv 351 (908)
T 3top_A 304 NDSEIASLYDEMVAAQIP---YDVQYSDIDYMER----QLDFTLSP-KFAG-FPALI 351 (908)
T ss_dssp SHHHHHHHHHHHHHHTCC---CCEEEECGGGSST----TCTTCCCG-GGTT-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCC---eeeEEeecccccc----ccccccCC-CCCC-HHHHH
Confidence 789999999999987665 9999999999864 55799999 9997 66654
No 23
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*
Probab=76.32 E-value=0.81 Score=40.71 Aligned_cols=42 Identities=10% Similarity=0.177 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHHccccccCceEEEeccccccCCCCCCCCeeccCCCC
Q psy1868 51 SERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRF 99 (108)
Q Consensus 51 ~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~~rd~~G~~~~d~~rF 99 (108)
+|+.|++.++.+.+.++. ++.|.+|..|....| .+..|+++|
T Consensus 377 ~~~~v~~vv~~~r~~~IP---lDvi~lDidymd~~r----~FT~D~~~~ 418 (1027)
T 2x2h_A 377 NNISVEEIVEGYQNNNFP---FEGLAVDVDMQDNLR----VFTTKGEFW 418 (1027)
T ss_dssp TCCBHHHHHHHHHHTTCC---CCEEEECGGGSSTTC----TTCCCGGGB
T ss_pred cHHHHHHHHHHHHHcCCC---CcceEEecccccCCC----ccccccccC
Confidence 345799999999998766 899999999987544 345555444
No 24
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=52.91 E-value=13 Score=32.19 Aligned_cols=29 Identities=17% Similarity=0.457 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEe---cccccc
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINI---DDCWLD 83 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~I---DdgW~~ 83 (108)
+|-+.+++-+|..+ +.|++||.| |.||..
T Consensus 368 ~nte~~K~YIDFAA-----~~G~eyvLveGwD~GW~~ 399 (738)
T 2d73_A 368 ANTANVKRYIDFAA-----AHGFDAVLVEGWNEGWED 399 (738)
T ss_dssp CCHHHHHHHHHHHH-----HTTCSEEEECSCBTTGGG
T ss_pred CCHHHHHHHHHHHH-----HcCCCEEEEEeccCCccc
Confidence 68899999999865 678889999 999974
No 25
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=42.91 E-value=10 Score=29.45 Aligned_cols=31 Identities=23% Similarity=0.324 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHH--ccccccCceEEEecccc
Q psy1868 51 SERLFRTMADLVVS--EGYAAVGYEYINIDDCW 81 (108)
Q Consensus 51 ~e~~i~~~ad~l~~--~Gl~~~Gy~yv~IDdgW 81 (108)
.++.+.+.|+++.+ ..|.++|.++|+|||.-
T Consensus 162 ~~e~~~dlA~a~~~ei~~l~~aG~~~IQiDeP~ 194 (357)
T 3rpd_A 162 REKLAWEFAKILNEEAKELEAAGVDIIQFDEPA 194 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEECGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcc
Confidence 45556666665543 23678999999999963
No 26
>2knq_A General secretion pathway protein H; GSPH, minor pseudopilin, methylation, transport protein, Pro transport; NMR {Escherichia coli}
Probab=41.16 E-value=43 Score=22.35 Aligned_cols=14 Identities=0% Similarity=0.169 Sum_probs=10.9
Q ss_pred ccccCceEEEeccc
Q psy1868 67 YAAVGYEYINIDDC 80 (108)
Q Consensus 67 l~~~Gy~yv~IDdg 80 (108)
+.+.||++...|++
T Consensus 42 i~~~gy~f~~~~~~ 55 (142)
T 2knq_A 42 FSDSAWRIMVPGKT 55 (142)
T ss_dssp ECSSCEEEEECCSC
T ss_pred EeCCeEEEEEECCC
Confidence 34569999999974
No 27
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=36.33 E-value=29 Score=25.78 Aligned_cols=43 Identities=14% Similarity=0.346 Sum_probs=29.7
Q ss_pred CCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEecccc
Q psy1868 24 LTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCW 81 (108)
Q Consensus 24 ~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW 81 (108)
+.|++|.-+|..++.. ++++...+..+... ++||++|--=+.+
T Consensus 14 ~vs~iglGt~~~~g~~----------~~~~~~~~~l~~Al-----~~Gi~~~DTA~~Y 56 (327)
T 3eau_A 14 RVSCLGLGTWVTFGGQ----------ITDEMAEHLMTLAY-----DNGINLFDTAEVY 56 (327)
T ss_dssp EEESEEEECTTCCCCC----------SCHHHHHHHHHHHH-----HTTCCEEEEETTG
T ss_pred cccceeecCccccCCC----------CCHHHHHHHHHHHH-----HcCCCEEECcccc
Confidence 3688999999766644 67777777776653 5788876544445
No 28
>1t6s_A Conserved hypothetical protein; A winged helix-turn-helix, structural genomics, BSGC structu by NIH, protein structure initiative, PSI; 1.95A {Chlorobium tepidum tls} SCOP: a.4.5.60 a.4.5.60
Probab=34.38 E-value=39 Score=23.55 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHHHcccc--ccCceEEEeccccccCCCCCC
Q psy1868 50 ISERLFRTMADLVVSEGYA--AVGYEYINIDDCWLDKTRSFN 89 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~--~~Gy~yv~IDdgW~~~~rd~~ 89 (108)
++.+.|.+..+.|.+. +. +.|++.+.+.+||+-..+.+.
T Consensus 36 ~~~~~v~~~l~~L~~~-y~~~~rg~~l~~v~~gy~l~t~~~~ 76 (162)
T 1t6s_A 36 FTPSELQEAVDELNRD-YEATGRTFRIHAIAGGYRFLTEPEF 76 (162)
T ss_dssp CCHHHHHHHHHHHHHH-HHHHTCSEEEEEETTEEEEEECGGG
T ss_pred CCHHHHHHHHHHHHHH-hhhCCCCEEEEEECCEEEEEEcHHH
Confidence 4667788887777643 44 689999999999986555444
No 29
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=34.28 E-value=32 Score=26.18 Aligned_cols=43 Identities=14% Similarity=0.346 Sum_probs=28.9
Q ss_pred CCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEecccc
Q psy1868 24 LTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCW 81 (108)
Q Consensus 24 ~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW 81 (108)
+.|++|.-+|..++-. ++++...+..+... ++||++|--=+.+
T Consensus 48 ~vs~iglGt~~~~g~~----------~~~~~~~~~l~~Al-----~~Gi~~~DTA~~Y 90 (367)
T 3lut_A 48 RVSCLGLGTWVTFGGQ----------ITDEMAEHLMTLAY-----DNGINLFDTAEVY 90 (367)
T ss_dssp EEESEEEECTTCCCCC----------SCHHHHHHHHHHHH-----HTTCCEEEEETTG
T ss_pred cccceeECCccccCCC----------CCHHHHHHHHHHHH-----HcCCCEEECcccc
Confidence 3578899999766544 67777777776653 5788876444444
No 30
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=30.51 E-value=21 Score=26.42 Aligned_cols=39 Identities=21% Similarity=0.388 Sum_probs=26.1
Q ss_pred hhccCCCCCCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEE
Q psy1868 16 KALDNGVALTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYI 75 (108)
Q Consensus 16 ~~~~~~~~~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv 75 (108)
..+++|+ +.|.+|.-+|. ++++...+..+... ++||++|
T Consensus 5 v~LntG~-~vp~iGlGtw~---------------~~~~~a~~~i~~Al-----~~Gin~~ 43 (324)
T 4gac_A 5 VLLHTGQ-KMPLIGLGTWK---------------SEPGQVKAAIKHAL-----SAGYRHI 43 (324)
T ss_dssp EECTTSC-EEESBCEECTT---------------CCHHHHHHHHHHHH-----HTTCCEE
T ss_pred EECCCCC-EeccceeECCC---------------CCHHHHHHHHHHHH-----HcCCCEE
Confidence 3466676 57889998885 46666666666543 5777776
No 31
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=30.40 E-value=55 Score=20.02 Aligned_cols=35 Identities=11% Similarity=-0.024 Sum_probs=19.5
Q ss_pred eeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEecc
Q psy1868 29 GWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDD 79 (108)
Q Consensus 29 GWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDd 79 (108)
=|.+|+.. |. -....+.+..+.+ ++.|++.+.|+.
T Consensus 38 f~~~~C~~-C~----------~~~~~l~~l~~~~-----~~~~~~~v~v~~ 72 (148)
T 3hcz_A 38 FWDSQCGH-CQ----------QETPKLYDWWLKN-----RAKGIQVYAANI 72 (148)
T ss_dssp EECGGGCT-TC----------SHHHHHHHHHHHH-----GGGTEEEEEEEC
T ss_pred EECCCCcc-HH----------HHHHHHHHHHHHh-----ccCCEEEEEEEe
Confidence 57788764 64 2333455555554 344666766654
No 32
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=30.22 E-value=39 Score=25.60 Aligned_cols=43 Identities=12% Similarity=0.252 Sum_probs=28.5
Q ss_pred CCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEecccc
Q psy1868 24 LTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCW 81 (108)
Q Consensus 24 ~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW 81 (108)
+.|++|.-+|..++-. ++++...+..+... ++||++|--=+.+
T Consensus 45 ~vs~lglGt~~~~g~~----------~~~~~~~~~l~~Al-----~~Gi~~~DTA~~Y 87 (353)
T 3erp_A 45 KLPAISLGLWHNFGDT----------TRVENSRALLQRAF-----DLGITHFDLANNY 87 (353)
T ss_dssp EEESEEEECSSSCSTT----------SCHHHHHHHHHHHH-----HTTCCEEECCTTC
T ss_pred ccCCeeecChhhcCCC----------CCHHHHHHHHHHHH-----HcCCCEEEChhhh
Confidence 3578899999666543 67777777777654 5788876444444
No 33
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=28.80 E-value=54 Score=25.76 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=23.5
Q ss_pred CCCHHHHHHHHHHHHHcccc-----cc-------CceEEEecccccc
Q psy1868 49 CISERLFRTMADLVVSEGYA-----AV-------GYEYINIDDCWLD 83 (108)
Q Consensus 49 ~i~e~~i~~~ad~l~~~Gl~-----~~-------Gy~yv~IDdgW~~ 83 (108)
.|+.+.+.++.+.|.+.|+. ++ -.-.+.+||||.+
T Consensus 164 ~Vspe~Fe~QL~~Lk~~GY~~Isl~el~~~~~p~K~V~LTFDDGy~d 210 (360)
T 4hd5_A 164 FVSPANFEAQMKHLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKN 210 (360)
T ss_dssp EECHHHHHHHHHHHHHTTCEEECGGGGGGTTTSSSEEEEEEEECBTT
T ss_pred eeCHHHHHHHHHHHHHCcCEEecHHHHhhccCCCCeEEEEEeCCCCc
Confidence 38999999999998776531 11 1234667777753
No 34
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=28.63 E-value=66 Score=25.04 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=30.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccC
Q psy1868 42 CKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDK 84 (108)
Q Consensus 42 ~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~ 84 (108)
|.|+.+..++.+.+++.++.+.+.++ +++.|+-+++-
T Consensus 199 p~NPtG~~~~~~~~~~i~~~~~~~~~------~~~~D~~Y~~~ 235 (420)
T 4h51_A 199 AHNPTGVDPSQEQWNEIASLMLAKHH------QVFFDSAYQGY 235 (420)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTC------EEEEEESCTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCc------eEeeehhhhhh
Confidence 56777888899999999999987654 58899999753
No 35
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=28.52 E-value=38 Score=21.32 Aligned_cols=27 Identities=19% Similarity=0.443 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHHHccccccCceEEEec
Q psy1868 51 SERLFRTMADLVVSEGYAAVGYEYINID 78 (108)
Q Consensus 51 ~e~~i~~~ad~l~~~Gl~~~Gy~yv~ID 78 (108)
|+++.++..+.++.. |..+||+-|++-
T Consensus 58 ndeqakelleliarl-lqklgykdinvr 84 (96)
T 2jvf_A 58 NDEQAKELLELIARL-LQKLGYKDINVR 84 (96)
T ss_dssp SHHHHHHHHHHHHHH-HHHHTCSEEEEE
T ss_pred ChHHHHHHHHHHHHH-HHHhCCCceEEE
Confidence 666666666655544 778899888764
No 36
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=28.22 E-value=64 Score=21.47 Aligned_cols=29 Identities=14% Similarity=-0.019 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHHccccccCceEEEecccccc
Q psy1868 51 SERLFRTMADLVVSEGYAAVGYEYINIDDCWLD 83 (108)
Q Consensus 51 ~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~ 83 (108)
||+.+.+..+...+.|+. -+++.|.||..
T Consensus 57 ~e~el~~L~~~a~~~gl~----~~~I~DAG~Te 85 (123)
T 1rzw_A 57 SLEELLGIKHKAESLGLV----TGLVQDAGLTE 85 (123)
T ss_dssp CHHHHHHHHHHHHHTTCC----EEEECCTTCCS
T ss_pred CHHHHHHHHHHHHHCCCC----EEEEECCCCcc
Confidence 799999988888766665 36788999964
No 37
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=27.61 E-value=46 Score=24.95 Aligned_cols=43 Identities=12% Similarity=0.231 Sum_probs=27.8
Q ss_pred CCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEecccc
Q psy1868 24 LTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCW 81 (108)
Q Consensus 24 ~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW 81 (108)
+.|.+|.-+|..++-. .+++...+..+... ++||++|=-=+.+
T Consensus 24 ~vs~lglGt~~~~g~~----------~~~~~~~~~l~~Al-----~~Gi~~~DTA~~Y 66 (346)
T 3n6q_A 24 RLPALSLGLWHNFGHV----------NALESQRAILRKAF-----DLGITHFDLANNY 66 (346)
T ss_dssp EEESEEEECSSSCSTT----------SCHHHHHHHHHHHH-----HTTCCEEECCTTC
T ss_pred eecCeeecCccccCCC----------CCHHHHHHHHHHHH-----HcCCCEEECcccc
Confidence 4678899898766543 56777766666543 5788876433333
No 38
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=27.20 E-value=79 Score=21.71 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=16.6
Q ss_pred HccccccCceEEEeccccc
Q psy1868 64 SEGYAAVGYEYINIDDCWL 82 (108)
Q Consensus 64 ~~Gl~~~Gy~yv~IDdgW~ 82 (108)
++|+.+.||.|++=-||--
T Consensus 57 ~~gw~dIGYhflI~~dG~I 75 (167)
T 2f2l_A 57 SSQKCDIAYNFLIGGDGNV 75 (167)
T ss_dssp TSCCSSCSCSEEECTTSCE
T ss_pred hCCCCCcCCcEEEcCCCEE
Confidence 6899999999999888863
No 39
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=26.94 E-value=75 Score=21.58 Aligned_cols=29 Identities=3% Similarity=0.125 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEecccc
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCW 81 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW 81 (108)
+|++.|.+|.+.|.+.|++- +.||- |++.
T Consensus 21 lt~eqI~kQI~Yll~qGw~p-~lEf~--d~~~ 49 (128)
T 1wdd_S 21 LTVEDLLKQIEYLLRSKWVP-CLEFS--KVGF 49 (128)
T ss_dssp CCHHHHHHHHHHHHHTTCEE-EEEEE--SCCS
T ss_pred CCHHHHHHHHHHHHHCCCee-eEEec--CCCc
Confidence 89999999999999999984 47776 6663
No 40
>1w79_A D-alanyl-D-alanine carboxypeptidase; penicillin-binding, peptidoglycan, transpeptidase, antibiotic resistance, hydrolase; 1.8A {Actinomadura SP} SCOP: e.3.1.3 PDB: 1w8q_A 1w8y_A* 2vgj_A* 2vgk_A* 2xln_A* 2y5o_A* 2xdm_A* 2xk1_A* 2y4a_A* 2y55_A* 2y59_A* 2wke_A* 2y5r_A* 3zvt_A* 3zvw_A*
Probab=26.38 E-value=78 Score=25.54 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=27.9
Q ss_pred CCCCCCHHHHHHHHHHHHHcccccc-CceEEEeccccccCC
Q psy1868 46 PENCISERLFRTMADLVVSEGYAAV-GYEYINIDDCWLDKT 85 (108)
Q Consensus 46 ~~~~i~e~~i~~~ad~l~~~Gl~~~-Gy~yv~IDdgW~~~~ 85 (108)
++..++.+.+.+.++.+++.|++.. | -|++|+.++...
T Consensus 94 GDPtL~~~~L~~La~~L~~~GI~~I~G--~lv~D~s~f~~~ 132 (489)
T 1w79_A 94 GDPTLSAEDLDAMAAEVAASGVRTVRG--DLYADDTWFDSE 132 (489)
T ss_dssp SCTTCCHHHHHHHHHHHHHTTCCEECS--CEEEECTTSCSC
T ss_pred CCCccCHHHHHHHHHHHHHcCCcEEee--eEEEECCccCCC
Confidence 4444889999999999887777652 2 468899987643
No 41
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=25.80 E-value=77 Score=21.86 Aligned_cols=29 Identities=14% Similarity=0.357 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEecccc
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCW 81 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW 81 (108)
+|++.|.+|++.|.+.|+.- +.||- |++-
T Consensus 21 lt~eqI~kQI~YlL~qGw~p-~lEf~--d~~~ 49 (140)
T 1gk8_I 21 LTDEQIAAQVDYIVANGWIP-CLEFA--EADK 49 (140)
T ss_dssp CCHHHHHHHHHHHHHTTCEE-EEEEE--CGGG
T ss_pred CCHHHHHHHHHHHHHCCCEe-eEEec--cCCc
Confidence 89999999999999999984 47777 7766
No 42
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=25.41 E-value=79 Score=20.78 Aligned_cols=43 Identities=19% Similarity=0.215 Sum_probs=24.4
Q ss_pred CCCceeeechhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEecc
Q psy1868 24 LTPPMGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDD 79 (108)
Q Consensus 24 ~~PpmGWnSW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDd 79 (108)
.-|=|||.|-.-...++. -..-|.+. |-++++ ..|++|.+...
T Consensus 46 ~nPLMGWtsS~D~~~qv~-----L~F~skE~----AiayAe----k~G~~y~V~ep 88 (108)
T 2lju_A 46 TEPLMNWTGSHDTKQQVC-----LSFTTREL----AIAYAV----AHKIDYTVLQD 88 (108)
T ss_dssp CCCCCCCSSSCCCCCCSC-----EEESSHHH----HHHHHH----HTTCEEEEECS
T ss_pred cCCCccccCCCCccccce-----EecCCHHH----HHHHHH----HcCCEEEEecC
Confidence 468899998765433311 00014433 334432 58999999864
No 43
>3v39_A D-alanyl-D-alanine carboxypeptidase; peptidoglycan transpeptidase fold, endopeptidase, serine MOD hepes buffer molecule, hydrolase; HET: PGE; 1.45A {Bdellovibrio bacteriovorus}
Probab=25.37 E-value=84 Score=25.14 Aligned_cols=36 Identities=8% Similarity=0.105 Sum_probs=28.1
Q ss_pred CCCCCCHHHHHHHHHHHHHccccccCceEEEecccccc
Q psy1868 46 PENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLD 83 (108)
Q Consensus 46 ~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~ 83 (108)
++..++.+.+.+.++.+.+.|++.. +-+++|+.++.
T Consensus 76 GDP~l~~~~l~~la~~l~~~Gi~~I--~~Li~D~S~f~ 111 (418)
T 3v39_A 76 RDPLFGRNMSYFLISELNRMKITKI--EKLTFDENFLL 111 (418)
T ss_dssp CCTTCSHHHHHHHHHHHHHTTCCEE--EEEEECTTCCC
T ss_pred CCCCcCHHHHHHHHHHHHHcCCceE--eEEEEECcccc
Confidence 3444899999999999988877753 46889998875
No 44
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=25.25 E-value=1e+02 Score=22.58 Aligned_cols=37 Identities=11% Similarity=0.114 Sum_probs=27.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccC
Q psy1868 42 CKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDK 84 (108)
Q Consensus 42 ~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~ 84 (108)
+.|+.+...+.+.+++.++...+.|+ ++++|+.++.-
T Consensus 184 p~NPtG~~~~~~~l~~i~~~~~~~~~------~li~Deay~~~ 220 (401)
T 7aat_A 184 AHNPTGVDPRQEQWKELASVVKKRNL------LAYFDMAYQGF 220 (401)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTC------EEEEEESCTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCc------EEEEccccccc
Confidence 45666667799999999988765432 69999998754
No 45
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=24.78 E-value=58 Score=22.00 Aligned_cols=10 Identities=0% Similarity=0.338 Sum_probs=8.9
Q ss_pred CceEEEeccc
Q psy1868 71 GYEYINIDDC 80 (108)
Q Consensus 71 Gy~yv~IDdg 80 (108)
.|+||+||+.
T Consensus 108 ~yD~viID~p 117 (224)
T 1byi_A 108 QADWVLVEGA 117 (224)
T ss_dssp TCSEEEEECS
T ss_pred hCCEEEEEcC
Confidence 5999999985
No 46
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=24.22 E-value=23 Score=21.21 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=13.0
Q ss_pred ccccCceEEEecccccc
Q psy1868 67 YAAVGYEYINIDDCWLD 83 (108)
Q Consensus 67 l~~~Gy~yv~IDdgW~~ 83 (108)
|+++||+..+++.|+..
T Consensus 73 L~~~G~~v~~l~GG~~~ 89 (94)
T 1wv9_A 73 LEAEGYEAMSLEGGLQA 89 (94)
T ss_dssp HHHHTCCEEEETTGGGC
T ss_pred HHHcCCcEEEEcccHHH
Confidence 45678887789999864
No 47
>3ep1_A PGRP-HD - peptidoglycan recognition protein homologue; immune system, thermophIle, model system; 2.10A {Alvinella pompejana}
Probab=23.85 E-value=36 Score=24.12 Aligned_cols=26 Identities=15% Similarity=0.151 Sum_probs=19.8
Q ss_pred HHHHHHHH-HccccccCceEEEecccc
Q psy1868 56 RTMADLVV-SEGYAAVGYEYINIDDCW 81 (108)
Q Consensus 56 ~~~ad~l~-~~Gl~~~Gy~yv~IDdgW 81 (108)
.+..+... ++|+.+.||.|++=-||-
T Consensus 63 vr~iq~~H~~~GW~dIGYhflI~~dG~ 89 (176)
T 3ep1_A 63 VKALQDADFKEGNDDIKYNFLIDQDGV 89 (176)
T ss_dssp HHHHHHHHHHTTCSSCSCSEEECTTSC
T ss_pred HHHHHHHHHHcCCCCcCccEEEcCCCE
Confidence 44454433 799999999999988884
No 48
>1w5d_A Penicillin-binding protein; D-Ala-D-Ala-carboxypeptidase, peptidoglycan, beta-lactam, hydrolase, peptidoglycan synthesis; 2.1A {Bacillus subtilis} SCOP: e.3.1.3 PDB: 2j9p_A*
Probab=23.77 E-value=87 Score=24.93 Aligned_cols=37 Identities=24% Similarity=0.453 Sum_probs=26.6
Q ss_pred CCCCCCHHHHHHHHHHHHHcccccc-CceEEEeccccccC
Q psy1868 46 PENCISERLFRTMADLVVSEGYAAV-GYEYINIDDCWLDK 84 (108)
Q Consensus 46 ~~~~i~e~~i~~~ad~l~~~Gl~~~-Gy~yv~IDdgW~~~ 84 (108)
++..++.+.+.+.++.+++.|++.. | -|++|+.++..
T Consensus 97 GDPtL~~~~l~~la~~l~~~Gi~~I~G--~l~~D~s~f~~ 134 (462)
T 1w5d_A 97 GDPTLLPSDFDKMAEILKHSGVKVIKG--NLIGDDTWHDD 134 (462)
T ss_dssp SCTTCCHHHHHHHHHHHHHTTCCEESS--CEEEECTTSCS
T ss_pred CCCccCHHHHHHHHHHHHHcCCcEEee--eEEEECCccCC
Confidence 3444888899999998877776642 1 46899988754
No 49
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=23.57 E-value=27 Score=21.85 Aligned_cols=16 Identities=19% Similarity=0.304 Sum_probs=12.8
Q ss_pred ccccCceEEEeccccc
Q psy1868 67 YAAVGYEYINIDDCWL 82 (108)
Q Consensus 67 l~~~Gy~yv~IDdgW~ 82 (108)
|++.||+.++++.|+.
T Consensus 76 L~~~G~~~~~l~GG~~ 91 (103)
T 3iwh_A 76 LEANGIDAVNVEGGMH 91 (103)
T ss_dssp HHTTTCEEEEETTHHH
T ss_pred HHHcCCCEEEecChHH
Confidence 4578888899999864
No 50
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=23.24 E-value=28 Score=21.10 Aligned_cols=17 Identities=12% Similarity=0.204 Sum_probs=13.7
Q ss_pred ccccCceEEEecccccc
Q psy1868 67 YAAVGYEYINIDDCWLD 83 (108)
Q Consensus 67 l~~~Gy~yv~IDdgW~~ 83 (108)
|+++||+..+++.|+..
T Consensus 76 L~~~G~~v~~l~GG~~~ 92 (100)
T 3foj_A 76 LEQNGVNAVNVEGGMDE 92 (100)
T ss_dssp HHTTTCEEEEETTHHHH
T ss_pred HHHCCCCEEEecccHHH
Confidence 45788889999999864
No 51
>1yzs_A Sulfiredoxin; PARB domain fold, oxidoreductase; NMR {Homo sapiens} SCOP: d.268.1.4 PDB: 2b6f_A*
Probab=22.51 E-value=79 Score=21.10 Aligned_cols=19 Identities=5% Similarity=0.181 Sum_probs=18.1
Q ss_pred CCHHHHHHHHHHHHHcccc
Q psy1868 50 ISERLFRTMADLVVSEGYA 68 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~ 68 (108)
+|++++.+.++.|.+.|++
T Consensus 41 ~d~~kv~eL~eSI~~~Gl~ 59 (121)
T 1yzs_A 41 LDPAKVQSLVDTIREDPDS 59 (121)
T ss_dssp CCHHHHHHHHHHHHHCGGG
T ss_pred CCHHHHHHHHHHHHhcCCC
Confidence 7999999999999999997
No 52
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=22.23 E-value=49 Score=28.77 Aligned_cols=31 Identities=10% Similarity=0.096 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHH--ccccccCceEEEeccccc
Q psy1868 52 ERLFRTMADLVVS--EGYAAVGYEYINIDDCWL 82 (108)
Q Consensus 52 e~~i~~~ad~l~~--~Gl~~~Gy~yv~IDdgW~ 82 (108)
++.+.+.|+++.+ ..|.++|.++|+|||.-.
T Consensus 608 ee~~~dlA~A~r~Ei~~L~~AG~r~IQiDEPal 640 (789)
T 3ppg_A 608 KIQALQLGLALRDEVNDLEGAGITVIQVDEPAI 640 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEcccch
Confidence 4555566655442 236789999999999754
No 53
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=22.20 E-value=64 Score=21.23 Aligned_cols=30 Identities=13% Similarity=0.319 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEeccccc
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWL 82 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~ 82 (108)
+|++.|.+|.+.|.+.|+.- +.||- |++-.
T Consensus 20 lt~eqI~kQI~Yll~qGw~p-~lEf~--d~~~~ 49 (109)
T 1rbl_M 20 LSDRQIAAQIEYMIEQGFHP-LIEFN--EHSNP 49 (109)
T ss_dssp CCHHHHHHHHHHHHHHTCEE-EEEEE--SCCCT
T ss_pred CCHHHHHHHHHHHHHCCCEE-EEEec--cCccc
Confidence 89999999999999999983 46665 65543
No 54
>4e8j_A Lincosamide resistance protein; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: MSE LN0; 1.82A {Staphylococcus haemolyticus} PDB: 4e8i_A* 4fo1_A*
Probab=22.12 E-value=65 Score=22.55 Aligned_cols=29 Identities=17% Similarity=0.184 Sum_probs=23.3
Q ss_pred CCCHHHHHHHHHHHHHccccccCceEEEecccccc
Q psy1868 49 CISERLFRTMADLVVSEGYAAVGYEYINIDDCWLD 83 (108)
Q Consensus 49 ~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~ 83 (108)
.|+.+.+++.++.|...+.+ ..|+.||.-
T Consensus 5 ~~~~~d~~evl~~l~~~~v~------~~i~GGwAv 33 (161)
T 4e8j_A 5 NVTEKELFYILDLFEHMKVT------YWLDGGWGV 33 (161)
T ss_dssp CCCHHHHHHHHHHHHHHTCC------EEEEHHHHH
T ss_pred ccCHHHHHHHHHHHHhCCCc------EEEEcHhhh
Confidence 48888899999999876655 678999963
No 55
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=21.82 E-value=28 Score=21.15 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=13.6
Q ss_pred ccccCceEEEecccccc
Q psy1868 67 YAAVGYEYINIDDCWLD 83 (108)
Q Consensus 67 l~~~Gy~yv~IDdgW~~ 83 (108)
|+.+||+..+++.||..
T Consensus 76 L~~~G~~v~~l~GG~~~ 92 (103)
T 3eme_A 76 LEANGIDAVNVEGGMHA 92 (103)
T ss_dssp HHTTTCEEEEETTHHHH
T ss_pred HHHCCCCeEEeCCCHHH
Confidence 45778888999998864
No 56
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=21.36 E-value=1.3e+02 Score=22.10 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=27.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccC
Q psy1868 42 CKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDK 84 (108)
Q Consensus 42 ~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~ 84 (108)
+.|+.+...+.+.+++.++...+.|+ ++++|+-++.-
T Consensus 192 p~NPtG~~~~~~~l~~i~~~~~~~~~------~li~De~y~~~ 228 (409)
T 4eu1_A 192 AHNPTGVDPTHDDWRQVCDVIKRRNH------IPFVDMAYQGF 228 (409)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTC------EEEEEESCTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCc------EEEEecccccc
Confidence 55666677788888888887765432 69999988753
No 57
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=21.35 E-value=74 Score=20.98 Aligned_cols=30 Identities=13% Similarity=0.295 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEeccccc
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWL 82 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~ 82 (108)
+|++.|.+|.+.|.+.|+.- +.||. |+.-.
T Consensus 22 lt~eqI~kQV~Yll~qGw~p-~iEf~--d~~~~ 51 (110)
T 1svd_M 22 MNAERIRAQIKYAIAQGWSP-GIEHV--EVKNS 51 (110)
T ss_dssp CCHHHHHHHHHHHHHTTCEE-EEEEE--CGGGT
T ss_pred CCHHHHHHHHHHHHHCCCee-EEEec--cCCcc
Confidence 89999999999999999883 46665 65543
No 58
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=20.68 E-value=29 Score=21.47 Aligned_cols=16 Identities=6% Similarity=0.320 Sum_probs=13.2
Q ss_pred ccccCceEEEeccccc
Q psy1868 67 YAAVGYEYINIDDCWL 82 (108)
Q Consensus 67 l~~~Gy~yv~IDdgW~ 82 (108)
|+++||+..+++.||.
T Consensus 75 L~~~G~~v~~l~GG~~ 90 (108)
T 3gk5_A 75 LSQLGLNIVDVEGGIQ 90 (108)
T ss_dssp HHTTTCCEEEETTHHH
T ss_pred HHHcCCCEEEEcCcHH
Confidence 4578888899999986
No 59
>2h62_A BMP-2, BMP-2A, bone morphogenetic protein 2; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.17.1.2 PDB: 2goo_A* 1rew_A 3bmp_A 2qj9_B 1es7_A 2qja_A 2qjb_A 2h64_A 3bk3_A 1reu_A
Probab=20.54 E-value=17 Score=23.84 Aligned_cols=18 Identities=33% Similarity=1.104 Sum_probs=14.5
Q ss_pred eeeech-------hhhhccCCCCCC
Q psy1868 28 MGWLAW-------ERFRCNTDCKND 45 (108)
Q Consensus 28 mGWnSW-------~~~~~~~~~~~~ 45 (108)
+||+.| ++++|...|...
T Consensus 26 lGW~~WIiaP~gy~a~yC~G~C~~p 50 (114)
T 2h62_A 26 VGWNDWIVAPPGYHAFYCHGECPFP 50 (114)
T ss_dssp HTCTTTEEECSEEECCEEECBCCSS
T ss_pred cCCcccEEcCCceEeEeeeeECCCC
Confidence 589888 789998778754
No 60
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=20.48 E-value=92 Score=21.38 Aligned_cols=26 Identities=15% Similarity=0.270 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHHHHHccccccCceEEEeccc
Q psy1868 50 ISERLFRTMADLVVSEGYAAVGYEYINIDDC 80 (108)
Q Consensus 50 i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdg 80 (108)
++.+.+.+..+.+.+ ..|+||+||..
T Consensus 97 ~~~~~~~~~l~~l~~-----~~yD~viiD~p 122 (260)
T 3q9l_A 97 LTREGVAKVLDDLKA-----MDFEFIVCDSP 122 (260)
T ss_dssp SCHHHHHHHHHHHHH-----TTCSEEEEECC
T ss_pred CCHHHHHHHHHHHhc-----cCCCEEEEcCC
Confidence 566777777766642 26999999985
No 61
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=20.44 E-value=1.2e+02 Score=22.45 Aligned_cols=37 Identities=11% Similarity=0.195 Sum_probs=27.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHccccccCceEEEeccccccC
Q psy1868 42 CKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDK 84 (108)
Q Consensus 42 ~~~~~~~~i~e~~i~~~ad~l~~~Gl~~~Gy~yv~IDdgW~~~ 84 (108)
+.|+.+..++.+.+++.++...+.|+ ++++|+-+..-
T Consensus 204 p~NPtG~~~~~~~l~~i~~~~~~~~~------~li~De~y~~~ 240 (420)
T 4f4e_A 204 CHNPTGVDLNDAQWAQVVEVVKARRL------VPFLDIAYQGF 240 (420)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTC------EEEEEESCTTS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCc------EEEEccccccc
Confidence 45666667788889999988766543 68999988653
No 62
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=20.41 E-value=64 Score=24.89 Aligned_cols=30 Identities=20% Similarity=0.433 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHH--ccccccCceEEEecccc
Q psy1868 52 ERLFRTMADLVVS--EGYAAVGYEYINIDDCW 81 (108)
Q Consensus 52 e~~i~~~ad~l~~--~Gl~~~Gy~yv~IDdgW 81 (108)
++.+.+.|+++.+ .-|.++|.++|+||+.=
T Consensus 159 ~~l~~~la~a~~~ei~~l~~aG~~~IQiDeP~ 190 (375)
T 1ypx_A 159 EKFANDLATAYQKAIQAFYDAGCRYLQLDDTS 190 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEecCCc
Confidence 4445555544432 23667899999999953
No 63
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=20.31 E-value=78 Score=23.95 Aligned_cols=22 Identities=32% Similarity=0.424 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHHccccccCceEEEec
Q psy1868 51 SERLFRTMADLVVSEGYAAVGYEYINID 78 (108)
Q Consensus 51 ~e~~i~~~ad~l~~~Gl~~~Gy~yv~ID 78 (108)
|++.+++.+++++++|++ |++|
T Consensus 75 t~~df~~lv~~aH~~Gi~------VilD 96 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVR------IYVD 96 (496)
T ss_dssp CHHHHHHHHHHHHHTTCE------EEEE
T ss_pred CHHHHHHHHHHHHHCCCE------EEEE
Confidence 788999999999998888 6666
No 64
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=20.05 E-value=66 Score=20.83 Aligned_cols=17 Identities=18% Similarity=0.149 Sum_probs=12.5
Q ss_pred ccccCc-eEEEecccccc
Q psy1868 67 YAAVGY-EYINIDDCWLD 83 (108)
Q Consensus 67 l~~~Gy-~yv~IDdgW~~ 83 (108)
|+++|| +..+++.||..
T Consensus 100 L~~~G~~~v~~l~GG~~~ 117 (148)
T 2fsx_A 100 ATEAGITPAYNVLDGFEG 117 (148)
T ss_dssp HHHTTCCSEEEETTTTTC
T ss_pred HHHcCCcceEEEcCChhh
Confidence 345677 47899999864
Done!