BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy187
(493 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5MJS3|DMP4_MOUSE Extracellular serine/threonine protein kinase FAM20C OS=Mus
musculus GN=Fam20c PE=2 SV=1
Length = 579
Score = 305 bits (782), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/273 (54%), Positives = 180/273 (65%), Gaps = 49/273 (17%)
Query: 33 LVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYP 92
L K + R+Q+T P+ FYF+DYERHN+EIA FHLDR+L FRR PV GR+ N+T EI
Sbjct: 278 LFKPMKQTREQETPPDFFYFSDYERHNAEIAAFHLDRILDFRRVPPVAGRMINMTKEIRD 337
Query: 93 LV-DGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKV 151
+ D +L +TFFVSP NNICF+G+CSYYC T HA+CG PD +EGS AAFLPD S+A+RK
Sbjct: 338 VTRDKKLWRTFFVSPANNICFYGECSYYCSTEHALCGRPDQIEGSLAAFLPDLSLAKRKT 397
Query: 152 WRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHY 211
WR+PWRRSYHKR+KA+WE D DYC+ V++ PPY+ G R+LD+MDM V DFL+GNMDRHHY
Sbjct: 398 WRNPWRRSYHKRKKAEWEVDPDYCEEVKQTPPYDSGHRILDIMDMTVFDFLMGNMDRHHY 457
Query: 212 ETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFP 271
ETF + F NETF
Sbjct: 458 ETF------------------------------------------------EKFGNETFI 469
Query: 272 IHLDHGRGFGRAYHDELSILAPILQCCLIRERT 304
IHLD+GRGFG+ HDELSILAP+ QCC IR T
Sbjct: 470 IHLDNGRGFGKYSHDELSILAPLHQCCRIRRST 502
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 1 MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHL 33
MDM V DFL+GNMDRHHYETF+ F NETF IHL
Sbjct: 440 MDMTVFDFLMGNMDRHHYETFEKFGNETFIIHL 472
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 425 KLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIE 467
KLS M ES+ D +AP+L+Q HL+ALDRR++I+LQA+R C+E
Sbjct: 515 KLSLLMAESLQHDKVAPVLYQLHLEALDRRLRIVLQAVRDCVE 557
>sp|Q8IXL6|DMP4_HUMAN Extracellular serine/threonine protein kinase FAM20C OS=Homo
sapiens GN=FAM20C PE=1 SV=2
Length = 584
Score = 302 bits (773), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 206/351 (58%), Gaps = 59/351 (16%)
Query: 33 LVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYP 92
L K + R+Q+T P+ FYF+DYERHN+EIA FHLDR+L FRR PV GR+ N+T EI
Sbjct: 283 LFKPMKQTREQETPPDFFYFSDYERHNAEIAAFHLDRILDFRRVPPVAGRMVNMTKEIRD 342
Query: 93 LV-DGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKV 151
+ D +L +TFF+SP NNICF+G+CSYYC T HA+CG PD +EGS AAFLPD S+A+RK
Sbjct: 343 VTRDKKLWRTFFISPANNICFYGECSYYCSTEHALCGKPDQIEGSLAAFLPDLSLAKRKT 402
Query: 152 WRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHY 211
WR+PWRRSYHKR+KA+WE D DYC+ V++ PPY+ R+LD+MDM + DFL+GNMDRHHY
Sbjct: 403 WRNPWRRSYHKRKKAEWEVDPDYCEEVKQTPPYDSSHRILDVMDMTIFDFLMGNMDRHHY 462
Query: 212 ETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFP 271
ETF + F NETF
Sbjct: 463 ETF------------------------------------------------EKFGNETFI 474
Query: 272 IHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGD-- 329
IHLD+GRGFG+ HDELSIL P+ QCC IR+ T L Y ++ + GD
Sbjct: 475 IHLDNGRGFGKYSHDELSILVPLQQCCRIRKSTYLRLQLLAKEEYKLSLLMAESLRGDQV 534
Query: 330 -----EPQLPGVGEHVTVMTQMESSTQEIHKSLNTII--DYQTHHRLREAQ 373
+P L + + V+ + E L++++ D T HR A+
Sbjct: 535 APVLYQPHLEALDRRLRVVLKAVRDCVE-RNGLHSVVDDDLDTEHRAASAR 584
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 1 MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHL 33
MDM + DFL+GNMDRHHYETF+ F NETF IHL
Sbjct: 445 MDMTIFDFLMGNMDRHHYETFEKFGNETFIIHL 477
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 425 KLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIE 467
KLS M ES+ D +AP+L+QPHL+ALDRR++++L+A+R C+E
Sbjct: 520 KLSLLMAESLRGDQVAPVLYQPHLEALDRRLRVVLKAVRDCVE 562
>sp|Q96MK3|FA20A_HUMAN Protein FAM20A OS=Homo sapiens GN=FAM20A PE=1 SV=4
Length = 541
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/277 (44%), Positives = 163/277 (58%), Gaps = 49/277 (17%)
Query: 29 FPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITS 88
F + K R RD++T + FYF D++RHN+EIA FHLDR+L FRR P GR+ N+T
Sbjct: 231 FGKAMFKPMRQQRDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTK 290
Query: 89 EIYPLVDGELLKT-FFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVA 147
EI + E+L++ FFVSP +N+CF KC Y C T +AVCGNP +LEGS +AFLP ++A
Sbjct: 291 EILEVTKNEILQSVFFVSPASNVCFFAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLA 350
Query: 148 ERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMD 207
R +PW RSY K +WE
Sbjct: 351 PRLSVPNPWIRSYTLAGKEEWE-------------------------------------- 372
Query: 208 RHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDN 267
+ YCD V++I PYN +RLL+++DMA+ DFLIGNMDRHHYE F F +
Sbjct: 373 ----------VNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGD 422
Query: 268 ETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERT 304
+ F IHLD+ RGFGR HDE+SIL+P+ QCC+I+++T
Sbjct: 423 DGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKT 459
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 28/41 (68%)
Query: 1 MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPR 41
+DMA+ DFLIGNMDRHHYE F F ++ F IHL F R
Sbjct: 397 IDMAIFDFLIGNMDRHHYEMFTKFGDDGFLIHLDNARGFGR 437
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 425 KLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCI------EVRLDKPTEN 476
+LS+ M ES+ D ++P+L +PHL ALDRR++ IL+ + CI V +D P E
Sbjct: 472 RLSDVMRESLLEDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQ 529
>sp|Q8CID3|FA20A_MOUSE Protein FAM20A OS=Mus musculus GN=Fam20a PE=1 SV=1
Length = 541
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/277 (44%), Positives = 159/277 (57%), Gaps = 49/277 (17%)
Query: 29 FPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITS 88
F + K R R+++T + FYF D++RHN+EIA FHLDR+L FRR P GRL N+T
Sbjct: 231 FGKAMFKPMRQQREEETPEDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRLVNVTK 290
Query: 89 EIYPLVDGELLKT-FFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVA 147
EI + E+L++ FFVSP NN+CF KC Y C T +AVCGNP +LEGS +AFLP ++A
Sbjct: 291 EILEVTKNEILQSVFFVSPANNVCFFAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLA 350
Query: 148 ERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMD 207
R +PW RSY K +WE
Sbjct: 351 PRLSVPNPWIRSYSLSGKEEWE-------------------------------------- 372
Query: 208 RHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDN 267
+ YCD V++I PYN RLL ++DMAV DFLIGNMDRHHYE F F +
Sbjct: 373 ----------LNPLYCDTVKQIYPYNSSNRLLGIIDMAVFDFLIGNMDRHHYEMFTKFGD 422
Query: 268 ETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERT 304
+ + IHLD+ RGFGR DE+SILAP+ QCC+I+ +T
Sbjct: 423 DGYLIHLDNARGFGRHSQDEISILAPLAQCCMIKRKT 459
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 29/44 (65%)
Query: 1 MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQ 44
+DMAV DFLIGNMDRHHYE F F ++ + IHL F R Q
Sbjct: 397 IDMAVFDFLIGNMDRHHYEMFTKFGDDGYLIHLDNARGFGRHSQ 440
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 425 KLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEV 468
+LS+ M ES+ D ++P+L +PHL ALDRR++IIL+ + CIE
Sbjct: 472 RLSDVMRESLLEDQLSPVLTEPHLLALDRRLQIILKTVEDCIEA 515
>sp|Q8VCS3|XYLK_MOUSE Glycosaminoglycan xylosylkinase OS=Mus musculus GN=Fam20b PE=2 SV=1
Length = 409
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 143/262 (54%), Gaps = 62/262 (23%)
Query: 52 FTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNIC 111
+ Y+RHN+E+A FHLDR+LGFRRA V GR N+ +E+ P+ +LL TF + GNN C
Sbjct: 138 YAGYDRHNAEVAAFHLDRILGFRRAPLVVGRYVNLRTEVKPVATEQLLSTFL-TVGNNTC 196
Query: 112 FHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVW-----RHPWRRSYHKRRKA 166
F+GKC YYC + C + DM+EGS +LPD VW RHPW R+Y + + A
Sbjct: 197 FYGKC-YYCRETEPACADGDMMEGSVTLWLPD-------VWPLQKHRHPWGRTYREGKLA 248
Query: 167 QWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIV 226
+WE+D YCD V++ PY+ G RLLD++D AV D+LIGN DRHHYE+F+
Sbjct: 249 RWEYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQ----------- 297
Query: 227 REIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHD 286
++G +L I LD+ + FG D
Sbjct: 298 -----DDEGASML--------------------------------ILLDNAKSFGNPSLD 320
Query: 287 ELSILAPILQCCLIRERTLNTL 308
E SILAP+ QCC+IR T N L
Sbjct: 321 ERSILAPLYQCCIIRVSTWNRL 342
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 426 LSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIE 467
L A+ +M+ DPI+P+L PHLD +D+R+ +L I+ C +
Sbjct: 350 LKSALKSAMAHDPISPVLSDPHLDTVDQRLLNVLATIKQCTD 391
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 1 MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRF 39
+D AV D+LIGN DRHHYE+F+ + + I L F
Sbjct: 276 IDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSF 314
>sp|Q5RH51|XYLK_DANRE Glycosaminoglycan xylosylkinase OS=Danio rerio GN=fam20b PE=2 SV=1
Length = 409
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 159/321 (49%), Gaps = 67/321 (20%)
Query: 52 FTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNIC 111
+ Y+RHN+EIA FHLDR+LGFRRA V GR N+ +EI P+ +LL TF + GNN C
Sbjct: 138 YAGYDRHNAEIAAFHLDRILGFRRAPLVVGRFMNLRTEIKPVATDQLLSTFLMH-GNNTC 196
Query: 112 FHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVW-----RHPWRRSYHKRRKA 166
F+GKC YYC + C D++EGS +LPD VW RHPW R+Y + + A
Sbjct: 197 FYGKC-YYCRETEPACAEGDVMEGSVTLWLPD-------VWPLQKHRHPWGRTYREGKLA 248
Query: 167 QWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIV 226
+WE+D YC+ V+++PPY+ G RLLD++D ++ D+LIGN DRHHYE+F+ A
Sbjct: 249 RWEYDESYCEAVKKMPPYDAGPRLLDVIDTSIFDYLIGNADRHHYESFQDDGGA------ 302
Query: 227 REIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHD 286
+ I LD+ + FG D
Sbjct: 303 ------------------------------------------SMLILLDNAKSFGNPSLD 320
Query: 287 ELSILAPILQCCLIRERT---LNTLLNNEFSTYSHKVVYMD--FQVGDEPQLPGVGEHVT 341
E SILAP+ QCC++R T LN L S+ + D F V L + +
Sbjct: 321 ERSILAPLYQCCMVRVSTWNRLNLLKGGVLSSAMRQATAHDPAFPVLTGAHLTALDRRLN 380
Query: 342 VMTQMESSTQEIHKSLNTIID 362
+ E S NT+I+
Sbjct: 381 GVLATVRQCMETQGSENTLIE 401
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 426 LSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPT 474
LS AM ++ + DP P+L HL ALDRR+ +L +R C+E + + T
Sbjct: 350 LSSAMRQATAHDPAFPVLTGAHLTALDRRLNGVLATVRQCMETQGSENT 398
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 1 MDMAVLDFLIGNMDRHHYETFK 22
+D ++ D+LIGN DRHHYE+F+
Sbjct: 276 IDTSIFDYLIGNADRHHYESFQ 297
>sp|O75063|XYLK_HUMAN Glycosaminoglycan xylosylkinase OS=Homo sapiens GN=FAM20B PE=1 SV=1
Length = 409
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 142/262 (54%), Gaps = 62/262 (23%)
Query: 52 FTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNIC 111
+ Y+RHN+E+A FHLDR+LGF RA V GR N+ +EI P+ +LL TF + GNN C
Sbjct: 138 YAGYDRHNAEVAAFHLDRILGFHRAPLVVGRFVNLRTEIKPVATEQLLSTFL-TVGNNTC 196
Query: 112 FHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVW-----RHPWRRSYHKRRKA 166
F+GKC YYC + C + D++EGS +LPD VW RHPW R+Y + + A
Sbjct: 197 FYGKC-YYCRETEPACADGDIMEGSVTLWLPD-------VWPLQKHRHPWGRTYREGKLA 248
Query: 167 QWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIV 226
+WE+D YCD V++ PY+ G RLLD++D AV D+LIGN DRHHYE+F+
Sbjct: 249 RWEYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQ----------- 297
Query: 227 REIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHD 286
++G +L I LD+ + FG D
Sbjct: 298 -----DDEGASML--------------------------------ILLDNAKSFGNPSLD 320
Query: 287 ELSILAPILQCCLIRERTLNTL 308
E SILAP+ QCC+IR T N L
Sbjct: 321 ERSILAPLYQCCIIRVSTWNRL 342
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 426 LSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIE 467
L A+ +M+ DPI+P+L PHLDA+D+R+ +L ++ C +
Sbjct: 350 LKSALKSAMAHDPISPVLSDPHLDAVDQRLLSVLATVKQCTD 391
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 1 MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRF 39
+D AV D+LIGN DRHHYE+F+ + + I L F
Sbjct: 276 IDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSF 314
>sp|Q9Y3Q3|TMED3_HUMAN Transmembrane emp24 domain-containing protein 3 OS=Homo sapiens
GN=TMED3 PE=1 SV=1
Length = 217
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQ-LPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHH 367
+NEFST+SHK VY DFQVGDEP LP +G VT +TQMES+ IH++L T+ID QTH+
Sbjct: 102 FSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEALKTVIDSQTHY 161
Query: 368 RLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
RLREAQ R RAEDLN RV +WS E + + + S QV ++K+FF +
Sbjct: 162 RLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEK 208
>sp|Q78IS1|TMED3_MOUSE Transmembrane emp24 domain-containing protein 3 OS=Mus musculus
GN=Tmed3 PE=2 SV=1
Length = 221
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQ-LPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHH 367
+NEFST+SHK VY DFQVGDEP LP +G VT +TQMES+ IH++L T+ID QTH+
Sbjct: 106 FSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEALKTVIDSQTHY 165
Query: 368 RLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
RLREAQ R RAEDLN RV +WS E + + + S QV ++K+FF +
Sbjct: 166 RLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEK 212
>sp|Q6AY25|TMED3_RAT Transmembrane emp24 domain-containing protein 3 OS=Rattus
norvegicus GN=Tmed3 PE=1 SV=1
Length = 221
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQ-LPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHH 367
+NEFST+SHK VY DFQVGDEP LP +G VT +TQMES+ IH++L T+ID QTH+
Sbjct: 106 FSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEALKTVIDSQTHY 165
Query: 368 RLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
RLREAQ R RAEDLN RV +WS E + + + S QV ++K+FF +
Sbjct: 166 RLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEK 212
>sp|D3ZTX0|TMED7_RAT Transmembrane emp24 domain-containing protein 7 OS=Rattus
norvegicus GN=Tmed7 PE=1 SV=1
Length = 226
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 82/114 (71%)
Query: 301 RERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTI 360
+ T +NEFST++HK VY DFQVG++P L V+ +TQMES+ IH++L ++
Sbjct: 104 KNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSV 163
Query: 361 IDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
IDYQTH RLREAQGR RAEDLN RV +WS E +++L+ S QV+++K+FF+ +
Sbjct: 164 IDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDK 217
>sp|Q9Y3B3|TMED7_HUMAN Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens
GN=TMED7 PE=1 SV=2
Length = 224
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 82/114 (71%)
Query: 301 RERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTI 360
+ T +NEFST++HK VY DFQVG++P L V+ +TQMES+ IH++L ++
Sbjct: 102 KNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSV 161
Query: 361 IDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
IDYQTH RLREAQGR RAEDLN RV +WS E +++L+ S QV+++K+FF+ +
Sbjct: 162 IDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDK 215
>sp|P32803|EMP24_YEAST Endosomal protein P24B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=EMP24 PE=1 SV=1
Length = 203
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 20/131 (15%)
Query: 285 HDELSILAPI---LQCCLIRERTLNTLLNNEFSTYS-HKVVYMDFQVGDEPQLPGVGEHV 340
H E+++ AP Q C + E NT + + T++ H VVY+D D+P
Sbjct: 83 HGEITLSAPYKGHFQYCFLNE---NTGIETKDVTFNIHGVVYVDL---DDPN-------- 128
Query: 341 TVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLAS 400
++S+ +++ K + D Q++ +RE R AE N+RV WWS + VV+ S
Sbjct: 129 --TNTLDSAVRKLSKLTREVKDEQSYIVIRERTHRNTAESTNDRVKWWSIFQLGVVIANS 186
Query: 401 TLQVYIVKNFF 411
Q+Y ++ FF
Sbjct: 187 LFQIYYLRRFF 197
>sp|O13770|YE98_SCHPO Uncharacterized membrane protein C17A5.08 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC17A5.08 PE=3 SV=1
Length = 210
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTV---MTQMESSTQEIHKSLNTIIDYQT 365
+N ST++ K+V M+ + +E LP + M+S+ EI +L+ I Q
Sbjct: 97 FDNHMSTFTDKIVTMEITMENELSLPALTRDEAKDYKKDSMQSTVLEISTALSEIDRVQN 156
Query: 366 HHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNER 417
+ + RE + + R+ W+S E ++V+ S LQV+IVK FF R
Sbjct: 157 YFKTREHRNYSTVKSTQARIFWFSLAESIMVVALSALQVFIVKTFFKRSGRR 208
>sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing protein A OS=Dictyostelium
discoideum GN=empA PE=3 SV=1
Length = 205
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHR 368
+N+ S+ + K V VG+ + + + +T +E S + + + + Q + +
Sbjct: 98 FSNKMSSLTDKTVSFILSVGESSPIREIAKKKD-LTPIERSIMTLSDGVIAVKNEQNYFK 156
Query: 369 LREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFF 411
+REA R AE N RV+WWS E V++ S Q+Y ++ FF
Sbjct: 157 MREAAHRNTAESTNSRVLWWSVFEAFVLIALSIWQIYYLRRFF 199
>sp|Q7Z7H5|TMED4_HUMAN Transmembrane emp24 domain-containing protein 4 OS=Homo sapiens
GN=TMED4 PE=1 SV=1
Length = 227
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 321 VYMDFQVGDE----PQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRK 376
V++D QVG+ P++ + +T+++ +++ + I Q + R RE + R
Sbjct: 131 VHLDIQVGEHANNYPEIAAKDK----LTELQLRARQLLDQVEQIQKEQDYQRYREERFRL 186
Query: 377 RAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
+E N+RV+WWS + V+++L Q+ +K+FF ++
Sbjct: 187 TSESTNQRVLWWSIAQTVILILTGIWQMRHLKSFFEAKK 225
>sp|Q8R1V4|TMED4_MOUSE Transmembrane emp24 domain-containing protein 4 OS=Mus musculus
GN=Tmed4 PE=2 SV=1
Length = 227
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 321 VYMDFQVGDE----PQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRK 376
V++D QVG+ P++ + +T+++ +++ + I Q + R RE + R
Sbjct: 131 VHLDIQVGEHANNYPEIAAKDK----LTELQLRARQLLDQVEQIQKEQDYQRYREERFRL 186
Query: 377 RAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
+E N+RV+WWS + V+++L Q+ +K+FF ++
Sbjct: 187 TSESTNQRVLWWSIAQTVILILTGIWQMRHLKSFFEAKK 225
>sp|A7SXK3|TMED_NEMVE Transmembrane emp24 domain-containing protein OS=Nematostella
vectensis GN=v1g194562 PE=3 SV=1
Length = 203
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 304 TLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDY 363
T N +N+ ST + KV+ +G+ P+ E ++ ++ +++ +
Sbjct: 91 TYNYCFSNKMSTMTPKVLKFSMDIGEAPK-DTSKEDNAGHDKLSEMVSQLSEAMTGVKHE 149
Query: 364 QTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
Q + +RE R ++ N RV+WWS E +V++ + QVY +K FF R
Sbjct: 150 QEYMEVRERIHRSINDNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFFEVR 200
>sp|Q9BVK6|TMED9_HUMAN Transmembrane emp24 domain-containing protein 9 OS=Homo sapiens
GN=TMED9 PE=1 SV=2
Length = 235
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 310 NNEFSTYSHKV--VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHH 367
+ +FS ++ + V++D QVG+ +++++ +++ + + I Q +
Sbjct: 126 STKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQ 185
Query: 368 RLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
R RE + R+ +E N+RV+WWS ++ ++++ Q+ +K+FF ++
Sbjct: 186 RWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233
>sp|Q3T133|TMED9_BOVIN Transmembrane emp24 domain-containing protein 9 OS=Bos taurus
GN=TMED9 PE=2 SV=1
Length = 235
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 310 NNEFSTYSHKV--VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHH 367
+ +FS ++ + V++D QVG+ +++++ +++ + + I Q +
Sbjct: 126 STKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQ 185
Query: 368 RLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
R RE + R+ +E N+RV+WWS ++ ++++ Q+ +K+FF ++
Sbjct: 186 RWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233
>sp|Q99KF1|TMED9_MOUSE Transmembrane emp24 domain-containing protein 9 OS=Mus musculus
GN=Tmed9 PE=2 SV=2
Length = 235
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 310 NNEFSTYSHKV--VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHH 367
+ +FS ++ + V++D QVG+ +++++ +++ + + I Q +
Sbjct: 126 STKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQ 185
Query: 368 RLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
R RE + R+ +E N+RV+WWS ++ ++++ Q+ +K+FF ++
Sbjct: 186 RWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233
>sp|Q5I0E7|TMED9_RAT Transmembrane emp24 domain-containing protein 9 OS=Rattus
norvegicus GN=Tmed9 PE=1 SV=1
Length = 235
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 310 NNEFSTYSHKV--VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHH 367
+ +FS ++ + V++D QVG+ +++++ +++ + + I Q +
Sbjct: 126 STKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQ 185
Query: 368 RLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
R RE + R+ +E N+RV+WWS ++ ++++ Q+ +K+FF ++
Sbjct: 186 RWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233
>sp|B4NKL0|TMEDE_DROWI Transmembrane emp24 domain-containing protein eca OS=Drosophila
willistoni GN=eca PE=3 SV=1
Length = 216
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ ++ I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVDQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B4KB41|TMEDE_DROMO Transmembrane emp24 domain-containing protein eca OS=Drosophila
mojavensis GN=eca PE=3 SV=1
Length = 216
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B4LYB8|TMEDE_DROVI Transmembrane emp24 domain-containing protein eca OS=Drosophila
virilis GN=eca PE=3 SV=1
Length = 216
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B4JG34|TMEDE_DROGR Transmembrane emp24 domain-containing protein eca OS=Drosophila
grimshawi GN=eca PE=3 SV=1
Length = 216
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVQQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B4GMC3|TMEDE_DROPE Transmembrane emp24 domain-containing protein eca OS=Drosophila
persimilis GN=eca PE=3 SV=1
Length = 216
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B3NZM5|TMEDE_DROER Transmembrane emp24 domain-containing protein eca OS=Drosophila
erecta GN=eca PE=3 SV=1
Length = 216
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B4PVC6|TMEDE_DROYA Transmembrane emp24 domain-containing protein eca OS=Drosophila
yakuba GN=eca PE=3 SV=1
Length = 216
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B4QWH9|TMEDE_DROSI Transmembrane emp24 domain-containing protein eca OS=Drosophila
simulans GN=eca PE=3 SV=1
Length = 216
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B3MTS8|TMEDE_DROAN Transmembrane emp24 domain-containing protein eca OS=Drosophila
ananassae GN=eca PE=3 SV=1
Length = 216
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|Q9I7K5|TMEDE_DROME Transmembrane emp24 domain-containing protein eca OS=Drosophila
melanogaster GN=eca PE=2 SV=2
Length = 216
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + VV++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
>sp|B4HJV5|TMEDE_DROSE Transmembrane emp24 domain-containing protein eca OS=Drosophila
sechellia GN=eca PE=3 SV=1
Length = 216
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + +V++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTIVLVCMGFWQMRHLKSFFEAKK 214
>sp|Q28BQ6|TMED1_XENTR Transmembrane emp24 domain-containing protein 1 OS=Xenopus
tropicalis GN=tmed1 PE=2 SV=1
Length = 220
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 309 LNNEFSTYSHKVVYM----DFQVGDEPQLPGVGEHVT--------VMTQMESSTQEIHKS 356
+N FST S K+V+ D Q GDE P V + ++ S + +
Sbjct: 100 FDNSFSTISEKLVFFELIFDNQQGDEE--PDSWADVVEPDELLDIKLEDIKESIESVKSR 157
Query: 357 LNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFF 411
L I QT R EA+ R + ERV +WS+I V++ + LQVY++K+ F
Sbjct: 158 LERSIQMQTVLRAFEARDRNLQDSNLERVNFWSAINVGVLVTVAFLQVYMLKSLF 212
>sp|Q295B2|TMEDE_DROPS Transmembrane emp24 domain-containing protein eca OS=Drosophila
pseudoobscura pseudoobscura GN=eca PE=3 SV=1
Length = 216
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V++D QVG+ +T+++ +++ + I Q + R RE + R +E
Sbjct: 120 VHLDIQVGEHAIDYANVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSES 179
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N RV+WWS + +V++ Q+ +K+FF ++
Sbjct: 180 TNSRVLWWSLAQTLVLVCMGFWQMRHLKSFFEAKK 214
>sp|P38819|ERP5_YEAST Protein ERP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERP5 PE=1 SV=1
Length = 212
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
V+++ ++G+ L + M ++ ++ + L++I Q R +EA+ R ++E
Sbjct: 118 VFIELEIGNVEALDSKKKED--MNSLKGRVGQLTQRLSSIRKEQDAIREKEAEFRNQSES 175
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
N ++M WS + +++L Q+ +KNFF +
Sbjct: 176 ANSKIMTWSVFQLLILLGTCAFQLRYLKNFFVKQ 209
>sp|Q9R0Q3|TMED2_MOUSE Transmembrane emp24 domain-containing protein 2 OS=Mus musculus
GN=Tmed2 PE=1 SV=1
Length = 201
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHR 368
+N ST + K+V +G+ P+ + E ++E E+ ++ + Q +
Sbjct: 94 FSNRMSTMTPKIVMFTIDIGEAPKGQDM-ETEAHQNKLEEMINELAVAMTAVKHEQEYME 152
Query: 369 LREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
+RE R ++ N RV+ WS E +V++ + Q+Y +K FF R
Sbjct: 153 VRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFEVR 198
>sp|Q63524|TMED2_RAT Transmembrane emp24 domain-containing protein 2 OS=Rattus
norvegicus GN=Tmed2 PE=1 SV=1
Length = 201
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHR 368
+N ST + K+V +G+ P+ + E ++E E+ ++ + Q +
Sbjct: 94 FSNRMSTMTPKIVMFTIDIGEAPKGQDM-ETEAHQNKLEEMINELAVAMTAVKHEQEYME 152
Query: 369 LREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
+RE R ++ N RV+ WS E +V++ + Q+Y +K FF R
Sbjct: 153 VRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFEVR 198
>sp|Q15363|TMED2_HUMAN Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens
GN=TMED2 PE=1 SV=1
Length = 201
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHR 368
+N ST + K+V +G+ P+ + E ++E E+ ++ + Q +
Sbjct: 94 FSNRMSTMTPKIVMFTIDIGEAPKGQDM-ETEAHQNKLEEMINELAVAMTAVKHEQEYME 152
Query: 369 LREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
+RE R ++ N RV+ WS E +V++ + Q+Y +K FF R
Sbjct: 153 VRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFEVR 198
>sp|P49020|TMED2_CRIGR Transmembrane emp24 domain-containing protein 2 (Fragment)
OS=Cricetulus griseus GN=TMED2 PE=1 SV=1
Length = 196
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHR 368
+N ST + K+V +G+ P+ + E ++E E+ ++ + Q +
Sbjct: 89 FSNRMSTMTPKIVMFTIDIGEAPKGQDM-ETEAHQNKLEEMINELAVAMTAVKHEQEYME 147
Query: 369 LREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
+RE R ++ N RV+ WS E +V++ + Q+Y +K FF R
Sbjct: 148 VRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFEVR 193
>sp|Q5BK85|TMED1_RAT Transmembrane emp24 domain-containing protein 1 OS=Rattus
norvegicus GN=Tmed1 PE=2 SV=1
Length = 227
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 309 LNNEFSTYSHKVVYMDF---QVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTI----- 360
+N FST S K+V+ + DE ++ G E V ++ ++I +S+ T+
Sbjct: 107 FDNSFSTISEKLVFFELIFDSFQDEEEVEGWAEAVEPEEMLDVKMEDIKESIETMRTRLE 166
Query: 361 --IDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFF 411
I T R EA+ R ED ERV +WS+ V+LL + LQV +K FF
Sbjct: 167 RSIQMLTLLRAFEARDRNLQEDNLERVNFWSAANVAVLLLVAVLQVCTLKRFF 219
>sp|Q3V009|TMED1_MOUSE Transmembrane emp24 domain-containing protein 1 OS=Mus musculus
GN=Tmed1 PE=2 SV=1
Length = 227
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 309 LNNEFSTYSHKVVYMDF---QVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTI----- 360
+N FST S K+V+ + DE ++ G E V ++ ++I +S+ T+
Sbjct: 107 FDNSFSTISEKLVFFELIFDSFQDEEEVEGWAEAVEPEEMLDVKMEDIKESIETMRTRLE 166
Query: 361 --IDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFF 411
I T R EA+ R ED ERV +WS+ V+LL + LQV +K FF
Sbjct: 167 RSIQMLTLLRAFEARDRNLQEDNLERVNFWSAANVAVLLLVAVLQVCTLKRFF 219
>sp|P27869|TMD11_CANFA Transmembrane emp24 domain-containing protein 11 OS=Canis
familiaris GN=TMED11 PE=1 SV=1
Length = 215
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 46/95 (48%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
++++ +VG + + + ++ + + + + I+ Q + R RE R +ED
Sbjct: 119 IHLEIRVGQHDLDAAIAQAKDKVNEVSFKLEHLIEQIEQIVKEQNYQRDREENFRMISED 178
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N V+WW+ + ++ + Q+ +KNFF ++
Sbjct: 179 TNSNVLWWAFAQTLIFIAIGIFQMKSLKNFFIAKK 213
>sp|Q05359|ERP1_YEAST Protein ERP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERP1 PE=1 SV=1
Length = 219
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 323 MDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLN 382
++FQVG + +L G+ + + + ++ + I Q R REA R +E +N
Sbjct: 127 VEFQVGSDEKLDSKGK--ATIDILHAKVNVLNSKIGEIRREQKLMRDREATFRDASEAVN 184
Query: 383 ERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
R MWW I+ +V+ + Q+ + FF +
Sbjct: 185 SRAMWWIVIQLIVLAVTCGWQMKHLGKFFVKQK 217
>sp|Q9CXE7|TMED5_MOUSE Transmembrane emp24 domain-containing protein 5 OS=Mus musculus
GN=Tmed5 PE=2 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 309 LNNEFSTYSHKVVYMDF---QVGDEPQ-LPGVGEHVTVMTQMESSTQEIHKSLNTIID-- 362
+N FST S KV++ + +G+E Q +++T +E ++I +S+N+I
Sbjct: 108 FDNTFSTISEKVIFFELILDNMGEEVQGQEDWKKYITNTDVLEMKLEDILESINSIKSRL 167
Query: 363 -----YQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
QT R EA+ R E +RV +WS + +V+++ S +QVY +K+ F +
Sbjct: 168 SKSGHIQTLLRAFEARDRNIQESNFDRVNFWSVVNLMVMVVVSAIQVYTLKSLFEDK 224
>sp|Q5R809|TMED5_PONAB Transmembrane emp24 domain-containing protein 5 OS=Pongo abelii
GN=TMED5 PE=2 SV=1
Length = 229
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 309 LNNEFSTYSHKVVYMDF---QVGDEPQ-LPGVGEHVTVMTQMESSTQEIHKSLNTIID-- 362
+N FST S KV++ + +G++ Q +++T ++ ++I +S+N+I
Sbjct: 108 FDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGTDMLDMKLEDILESINSIKSRL 167
Query: 363 -----YQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
QT R EA+ R E +RV +WS + VV+++ S +QVY++K+ F +
Sbjct: 168 SKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDK 224
>sp|O17528|TMED2_CAEEL Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans
GN=sel-9 PE=1 SV=1
Length = 203
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 309 LNNEFSTYSHKVVYMDFQVGDEP--QLPGVGEHVTVMT--QMESSTQEIHKSLNTIIDYQ 364
N+ ST + K V ++ EP Q PG + ++E +E+ +L ++ Q
Sbjct: 92 FGNKMSTMTPKAVMFTVEI-TEPHQQAPGAAANQDAADNAKLEEMVRELSSALMSVKHEQ 150
Query: 365 THHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
+ +RE R E+ N RV+ W++ E V++ + Q++ +K FF R
Sbjct: 151 EYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFFEVRT 201
>sp|Q9D2R4|TMD11_MOUSE Transmembrane emp24 domain-containing protein 11 OS=Mus musculus
GN=Tmed11 PE=2 SV=1
Length = 215
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 47/95 (49%)
Query: 321 VYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAED 380
+++D +VG+ + + + ++ Q + + + I+ Q + R RE R +ED
Sbjct: 119 IHLDIRVGEHDLDAAIVQAKDKVNEVTFKLQHLIEQVEQILKEQDYQRDREENFRITSED 178
Query: 381 LNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRN 415
N V+WW+ + ++ + Q+ +K+FF ++
Sbjct: 179 TNRNVLWWAFAQILIFISVGIFQMKHLKDFFIAKK 213
>sp|Q2KJ84|TMED5_BOVIN Transmembrane emp24 domain-containing protein 5 OS=Bos taurus
GN=TMED5 PE=2 SV=1
Length = 226
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 309 LNNEFSTYSHKVVYMDF---QVGDEPQ-LPGVGEHVTVMTQMESSTQEIHKSLNTIID-- 362
+N FST S KV++ + +G++ Q +++T ++ ++I +S+N+I
Sbjct: 105 FDNTFSTISEKVIFFELILDNMGEQEQEQEDWKKYITGTDMLDMKLEDILESINSIKSRL 164
Query: 363 -----YQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASR 414
QT R EA+ R E +RV +WS + VV+++ S +QVY++K+ F +
Sbjct: 165 SKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDK 221
>sp|Q9P7I9|EMP24_SCHPO Endosomal protein P24B OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=emp24 PE=3 SV=1
Length = 199
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 348 SSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIV 407
+++H +++ + Q + RE R AE N+RV WWS ++ V+++ Q++ +
Sbjct: 130 GKVRQLHDTISKVKHEQEYFVARERIHRNTAESTNDRVKWWSILQTVILVSVCVFQIFYL 189
Query: 408 KNFFASR 414
K F +
Sbjct: 190 KRLFEVK 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,892,576
Number of Sequences: 539616
Number of extensions: 8291997
Number of successful extensions: 22783
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 22658
Number of HSP's gapped (non-prelim): 112
length of query: 493
length of database: 191,569,459
effective HSP length: 122
effective length of query: 371
effective length of database: 125,736,307
effective search space: 46648169897
effective search space used: 46648169897
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)