RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1873
(157 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 97.9 bits (243), Expect = 4e-27
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTF-VKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G VGK+ + +F + F ++ TI F ++T ++ + L++ DTAGQ+ +
Sbjct: 12 IGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTI 71
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y G +LVY IT+ KSF+ ++ + + + V +++
Sbjct: 72 TTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEH--------------ASADVEKMIL 117
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK D++ +R +S + G++LA + F+E SAK +
Sbjct: 118 GNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANI 154
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 88.8 bits (219), Expect = 9e-24
Identities = 55/156 (35%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G VGKS+L++QFV G F++ YDPTIE+ + K +++ L+++DTAG ++++
Sbjct: 9 LGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMR 68
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y + G++LVYS+ + +SF+ ++ + D+++ + VP++LVG
Sbjct: 69 DLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-------------EKVPVILVG 115
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK DL ER +S EG+ LAE W F+E SAK
Sbjct: 116 NKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKT 151
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 86.4 bits (213), Expect = 1e-22
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 16/157 (10%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTF-VKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G VGKS L ++FV+ +F S+ TI F +KT +N + L++ DTAGQ+ +
Sbjct: 8 IGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTI 67
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y G +LVY IT ++F ++ + + + ++LV
Sbjct: 68 TTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEH--------------ANDEAQLLLV 113
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK D+ R+++ D+G+ LA+ F+E+SAK DD
Sbjct: 114 GNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDD 149
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 84.9 bits (209), Expect = 3e-22
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENT-FVKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G VGKS L QF + +F+ TI + ++ Q L++ DTAGQ+ +
Sbjct: 10 IGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAV 69
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y G ++VY IT ++ + ++ + I+L+
Sbjct: 70 TRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNL--------------TNPNTVIILI 115
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL +R ++Y+E K+ AE F+EASAK +
Sbjct: 116 GNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGE 152
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 84.1 bits (207), Expect = 7e-22
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 15/154 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTF-VKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G VGK+ L +F G F TI F +KT +N + L++ DTAGQ+ +
Sbjct: 11 IGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSI 70
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y + +L Y IT +SF + ++ + V VLV
Sbjct: 71 TQSYYRSANALILTYDITCEESFRCLPEWLREIEQY--------------ASNKVITVLV 116
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAK 153
GNK DL R +S + +E+ ++E SAK
Sbjct: 117 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK 150
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 82.6 bits (203), Expect = 3e-21
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTT-RMNNQDYDLKLVDTAGQDEYSIF 59
+G VGKS+L +F +F TI F + +++ + ++ DTAGQ+ Y
Sbjct: 10 IGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRI 69
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
+ Y G +LVY I H ++E V+ +L D S++ I+LV
Sbjct: 70 TSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDH--------------ADSNIVIMLV 115
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL R + DE + AE F+E SA
Sbjct: 116 GNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDST 152
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 82.2 bits (202), Expect = 6e-21
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTF-VKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G VGKS L ++F D + + Y TI F +KT ++ + L++ DTAGQ+ +
Sbjct: 12 IGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTI 71
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
+ Y HG ++VY +T +SF V++ ++ S+V +LV
Sbjct: 72 TSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRY--------------ATSTVLKLLV 117
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL +R++ YD K A++ K F+E SA
Sbjct: 118 GNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDST 154
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 80.8 bits (198), Expect = 2e-20
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 13/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G VGKS+L++QF+ +FV+ Y+PT +++ K ++ ++ + ++DTAGQ++Y+
Sbjct: 10 VGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 69
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y G++ V+SIT +SF +++L + +VP +LVG
Sbjct: 70 DNYFRSGEGFLCVFSITEMESFAATADFREQILRVKED-------------ENVPFLLVG 116
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK DL +R +S +E K A+ W +VE SAK
Sbjct: 117 NKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRA 152
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 80.3 bits (197), Expect = 2e-20
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLV--DTAGQDEYSI 58
+G VGK+ L ++F DG F+ + + ++ +KL DTAGQ+ +
Sbjct: 12 VGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRS 71
Query: 59 FPAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVL 118
Y D H +L+Y +T+ SF+ +Q ++ + V ++L
Sbjct: 72 VTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEY--------------AQHDVALML 117
Query: 119 VGNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
+GNK D ER++ ++G++LA+ + F+E SAK
Sbjct: 118 LGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGL 155
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 78.7 bits (193), Expect = 1e-19
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIE-NTFVKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G VGKSSL ++F D F TI + VKT ++ L + DTAGQ+ +
Sbjct: 13 IGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTL 72
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y G +LVY +T +F + ++L + + ++
Sbjct: 73 TPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDI--------------VNML 118
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
K R + +EG + A F+EASAK D
Sbjct: 119 VGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCD 155
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 78.9 bits (193), Expect = 1e-19
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G +VGK+ L I + +F Y PT+ + + T + + Y L L DTAGQ++Y
Sbjct: 9 VGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+++ +S+ S SFE V+ + + P +LVG
Sbjct: 69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH--------------HCPKTPFLLVG 114
Query: 121 NKKDLHMERMI------------SYDEGKRLAESWKA-GFVEASAKQDD 156
+ DL + + + ++LA KA +VE SA
Sbjct: 115 TQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQK 163
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 78.1 bits (191), Expect = 1e-19
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G VGKS+L+IQ + FVD YDPTIE+++ K ++ + L ++DTAGQ+EYS
Sbjct: 9 VGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMR 68
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
QY G++ V++I + KSFE + +++ + VP+VLVG
Sbjct: 69 DQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDS-------------DDVPMVLVG 115
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK D R + + + LA S+ ++E SAK
Sbjct: 116 NKCD-LAARTVESRQAQDLARSYGIPYIETSAKTRQ 150
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 78.0 bits (191), Expect = 2e-19
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRM-NNQDYDLKLVDTAGQDEYSIF 59
+G VGKS L +QF D +F +D TI F + + L++ DTAGQ+ +
Sbjct: 9 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSI 68
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y G +LVY IT ++F + + + ++ I+L+
Sbjct: 69 TRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSS--------------NMVIMLI 114
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL R + +EG+ A F+E SAK
Sbjct: 115 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTAC 151
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 77.3 bits (189), Expect = 3e-19
Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTI-ENTFVKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G +SVGK+SL +F+ F ++Y TI + KT + ++ L+L DTAGQ+ +
Sbjct: 6 LGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSL 65
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y D V+VY IT+ SF+ D + G S V I+LV
Sbjct: 66 IPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG--------------SDVIIMLV 111
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL +R +S +EG+R A+ F+E SAK
Sbjct: 112 GNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGY 148
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 77.3 bits (189), Expect = 4e-19
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTT-RMNNQDYDLKLVDTAGQDEYSIF 59
+G GKS L QF++ +F D + TI F + + L++ DTAGQ+ +
Sbjct: 11 IGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSV 70
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y G +LVY ITS +++ + + + + I+L
Sbjct: 71 TRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQN--------------IVIILC 116
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNKKDL +R +++ E R A+ + F+E SA +
Sbjct: 117 GNKKDLDADREVTFLEASRFAQENELMFLETSALTGE 153
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 77.2 bits (189), Expect = 5e-19
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 24/167 (14%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTT-----------RMNNQDYDLKLVD 49
+G VGK++ ++ D +F + T+ F + L+L D
Sbjct: 11 LGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWD 70
Query: 50 TAGQDEYSIFPAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTS 109
TAGQ+ + + D G++L++ +TS +SF V+ +L
Sbjct: 71 TAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA------------- 117
Query: 110 CVSSVPIVLVGNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
+ IVL+GNK DL +R ++ + + LA+ + + E SA
Sbjct: 118 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQ 164
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 76.2 bits (186), Expect = 7e-19
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRM-NNQDYDLKLVDTAGQDEY-SI 58
+G +VGK+ L+ +F G+F D + TI F + + + ++L DTAGQ+ +
Sbjct: 8 IGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKS 67
Query: 59 FPAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVL 118
Y ++H V VY +T+ SF + ++ + +P +L
Sbjct: 68 MVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQH-------------LLANDIPRIL 114
Query: 119 VGNKKDLHMERMISYDEGKRLAESWKAGFVEASAK 153
VGNK DL + D ++ A++ E SAK
Sbjct: 115 VGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK 149
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 76.2 bits (186), Expect = 1e-18
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 12/156 (7%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
G VGKSSL ++FV G F +SY PT+E+T+ + + L++ DT G ++
Sbjct: 8 FGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQ 67
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
H ++LVYSITS +S E ++ +Y+++ ++ G +++ +PI+LVG
Sbjct: 68 RLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVES------------IPIMLVG 115
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK D R + E + LA +WK F+E SAK +
Sbjct: 116 NKCDESPSREVQSSEAEALARTWKCAFMETSAKLNH 151
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 73.8 bits (180), Expect = 6e-18
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFV-KTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G VGK+SL +++ + +F D + T+ +F+ K + + +L + DTAGQ+ +
Sbjct: 9 LGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHAL 68
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y D +G +LVY IT SF+ V+ +L M + + + +V
Sbjct: 69 GPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKM--------------LGNEICLCIV 114
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL ER +S E + AES A SAKQ+
Sbjct: 115 GNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNK 151
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 73.8 bits (180), Expect = 7e-18
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRM-NNQDYDLKLVDTAGQDEYSIF 59
+G VGKSSL ++V +F TI F+ + +++ DTAGQ+ +
Sbjct: 12 LGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSL 71
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
+ +L +S+ +SF+ + + + + S P V++
Sbjct: 72 RTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEP----------ESFPFVIL 121
Query: 120 GNKKDLHMERMISYDEGKRLA-ESWKAGFVEASAK 153
GNK D+ ER +S +E + ++ + E SAK
Sbjct: 122 GNKIDIS-ERQVSTEEAQAWCRDNGDYPYFETSAK 155
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 73.5 bits (179), Expect = 8e-18
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 14/157 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G VGKS+L++QFV G FV+ YDPTIE+++ K ++ Q L+++DTAG ++++
Sbjct: 9 LGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMR 68
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y + G+ LVYSIT+ +F +Q L +++L + VP++LVG
Sbjct: 69 DLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDT-------------EDVPMILVG 115
Query: 121 NKKDLHMERMISYDEGKRLAESWKA-GFVEASAKQDD 156
NK DL ER++ ++G+ LA W F+E+SAK
Sbjct: 116 NKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKI 152
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 73.0 bits (178), Expect = 1e-17
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIE-NTFVKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G SVGK+S ++ D F ++ T+ + VKT N++ L++ DTAGQ+ Y
Sbjct: 11 IGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTI 70
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y G++L+Y IT+ +SF VQ ++ + ++LV
Sbjct: 71 TTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY--------------SWDNAQVLLV 116
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK D+ ER++S + G++LA+ F EASAK +
Sbjct: 117 GNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNI 153
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 71.6 bits (174), Expect = 5e-17
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 13/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G VGKS+L+IQF+ FV YDPTIE+++ K ++++ L ++DTAGQ+E+
Sbjct: 11 VGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMR 70
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
QY G++LV+S+T SFE + ++L + P++L+G
Sbjct: 71 EQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVK-------------DRDEFPMILIG 117
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK DL +R ++ +EG++LA K ++EASAK
Sbjct: 118 NKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRM 153
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 70.5 bits (171), Expect = 1e-16
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 13/157 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G VGKS+L+IQF FV YDPTIE++++K T ++NQ L ++DTAGQ+E+S
Sbjct: 10 VGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMR 69
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
QY G+++VYS+T SFE V + +L + + P++LV
Sbjct: 70 EQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESF-------------PMILVA 116
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDDY 157
NK DL R ++ D+GK +A + ++E SAK
Sbjct: 117 NKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPL 153
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 70.0 bits (170), Expect = 2e-16
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 27/166 (16%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G +VGK+ L I + F Y PT+ + + ++ + +L L DTAGQ++Y
Sbjct: 11 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLR 70
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
++ +S+ S SFE V+ + + + PI+LVG
Sbjct: 71 PLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRH--------------HCPNTPIILVG 116
Query: 121 NKKDLHMERMIS------------YDEGKRLAESWKA-GFVEASAK 153
K DL ++ Y +G +A+ A ++E SA
Sbjct: 117 TKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSAL 162
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 69.7 bits (169), Expect = 4e-16
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIE-NTFVKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G VGK+SL Q+V+ +F + Y TI + K ++++ +++ DTAGQ+ +
Sbjct: 8 LGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSL 67
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
+ VLV+ +T+ +F+ + D+ L + P V++
Sbjct: 68 GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPR----------DPENFPFVVL 117
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL ++ + + E SAK+
Sbjct: 118 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAI 154
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 68.5 bits (166), Expect = 1e-15
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G +VGK+ L + + + F + Y PT+ + + + + + Y L L DTAGQ++Y
Sbjct: 15 VGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLR 74
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+++ +S+ + SF+ V+ + L +VP +L+G
Sbjct: 75 PLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE--------------YAPNVPFLLIG 120
Query: 121 NKKDLHMER------------MISYDEGKRLAESWKA-GFVEASAKQDD 156
+ DL + I ++G++LA+ A +VE SA
Sbjct: 121 TQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQK 169
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 68.2 bits (165), Expect = 1e-15
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G VGKS+L+IQF+ FV YDPTIE+++ K ++ L ++DTAGQ+E+
Sbjct: 12 VGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMR 71
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
QY HG++LV++I +SF V L+ ++L + + P+VLVG
Sbjct: 72 EQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDR-------------DDFPVVLVG 118
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK DL +R + E S + EASAK
Sbjct: 119 NKADLESQRQVPRSEASAFGASHHVAYFEASAKLRL 154
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 66.6 bits (161), Expect = 5e-15
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRM-NNQDYDLKLVDTAGQDEYSIF 59
+G +VGKSSL ++FV GQF + + TI F+ T ++ ++ DTAGQ+ Y
Sbjct: 12 LGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSL 71
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y ++VY IT+ +SF + +L ++ I L
Sbjct: 72 APMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP--------------NIVIALS 117
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL +R + + E + A+ F+E SAK
Sbjct: 118 GNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSM 154
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 66.6 bits (161), Expect = 5e-15
Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G GK++L F F ++Y PT+ + + ++ Q +L L DT+G Y
Sbjct: 8 VGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVR 67
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
D ++ + I+ ++ + V + + + ++LVG
Sbjct: 68 PLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQE--------------FCPNTKMLLVG 113
Query: 121 NKKDL------------HMERMISYDEGKRLAESWKA-GFVEASAK 153
K DL H + +SYD+G +A+ A ++E SA
Sbjct: 114 CKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSAL 159
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 66.2 bits (160), Expect = 6e-15
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLV-DTAGQDEYSIF 59
+G +VGKSS+ ++FV F ++ +PTI F+ N+ + DTAGQ+ ++
Sbjct: 9 LGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASL 68
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y + ++VY +T +SF + +L + + I LV
Sbjct: 69 APMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQ--------------ASKDIIIALV 114
Query: 120 GNKKDLHM---ERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK D+ ER ++ +EG++LAE F E SAK +
Sbjct: 115 GNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGE 154
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 65.5 bits (158), Expect = 9e-15
Identities = 101/156 (64%), Positives = 124/156 (79%), Gaps = 13/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+GYRSVGKSSL+IQFV+GQFVDSYDPTIENTF K +N Q+Y L+LVDTAGQDEYSIFP
Sbjct: 10 LGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFP 69
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
YS+DI+GY+LVYS+TS KSFEV+++++ KLLDM +PI+LVG
Sbjct: 70 QTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMV-------------GKVQIPIMLVG 116
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NKKDLHMER+ISY+EGK LAESW A F+E+SAK++
Sbjct: 117 NKKDLHMERVISYEEGKALAESWNAAFLESSAKENQ 152
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 65.0 bits (157), Expect = 2e-14
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLV-DTAGQDEYSIF 59
+G VGKSS+ +FV+ F + +PTI +F+ T + L+ DTAG + +
Sbjct: 10 LGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRAL 69
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y ++VY IT ++F ++ +L + +
Sbjct: 70 APMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIV--------------VAIA 115
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK DL R + + K A+S A FVE SAK
Sbjct: 116 GNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAI 152
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 63.5 bits (153), Expect = 5e-14
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
G VGKS+L ++F+ +F+ YDPT+E+T+ ++++ ++++DTAGQ++
Sbjct: 8 FGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDTIQRE 67
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+ G+VLVY IT S + ++ +V ++LVG
Sbjct: 68 -GHMRWGEGFVLVYDITDRGS-------------FEEVLPLKNILDEIKKPKNVTLILVG 113
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK DL R +S +EG++LA F E SA +
Sbjct: 114 NKADLDHSRQVSTEEGEKLATELACAFYECSACTGE 149
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 63.9 bits (154), Expect = 5e-14
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK+ L I QF + Y PT+ +V ++ + +L L DTAG ++Y
Sbjct: 8 VGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRLR 67
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
D ++ +SI S S E + + + +VPI+LVG
Sbjct: 68 PLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--------------HFCPNVPIILVG 113
Query: 121 NKKDLHMERMI------------SYDEGKRLAESWKA-GFVEASAKQDD 156
NKKDL + +EG+ +A A G++E SAK D
Sbjct: 114 NKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKD 162
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 60.9 bits (146), Expect = 8e-13
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 14/160 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFV--KTTRMNNQDYDLKLVDTAGQDEYSI 58
+G VGK+SL ++V+ ++ Y TI F+ + T ++ +++ DTAGQ+ +
Sbjct: 8 LGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQS 67
Query: 59 FPAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVL 118
+ VLVY +T+ SFE ++ V + + + P V+
Sbjct: 68 LGVAFYRGADCCVLVYDVTNASSFE----------NIKSWRDEFLVHANVNSPETFPFVI 117
Query: 119 VGNKKDLHMERMISYDEGKRL--AESWKAGFVEASAKQDD 156
+GNK D + I ++ + SAK
Sbjct: 118 LGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAI 157
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 57.8 bits (138), Expect = 7e-12
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTI-ENTFVKTTRMNNQDYDLKLVDTAGQDEYSIF 59
+G +VGKSS+ ++ G F Y TI + + ++N++D L L DTAGQ+E+
Sbjct: 8 VGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAI 67
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y VLV+S T +SFE + +K + V +P LV
Sbjct: 68 TKAYYRGAQACVLVFSTTDRESFEAISSWREK---------------VVAEVGDIPTALV 112
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK DL + I +E + LA+ K F S K+D
Sbjct: 113 QNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDL 149
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 55.9 bits (133), Expect = 5e-11
Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 10/156 (6%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + VGKS+L+ F D + + ++ +
Sbjct: 9 IGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENKGENE 68
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+ + + S + + + + +PI+LVG
Sbjct: 69 WLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLR----------RARQTEDIPIILVG 118
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK DL R +S EG+ A + F+E SA
Sbjct: 119 NKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQH 154
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 54.3 bits (129), Expect = 2e-10
Identities = 21/159 (13%), Positives = 46/159 (28%), Gaps = 20/159 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK+++ + G+ V TI + ++ + D GQD+
Sbjct: 6 VGLDAAGKTTILYKLKLGEIV----TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLW 61
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y + G + V + + ++L + +++
Sbjct: 62 RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAED-------------ELRDAVLLVFA 108
Query: 121 NKK---DLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK+ + I+ G A D
Sbjct: 109 NKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGD 147
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 54.4 bits (129), Expect = 2e-10
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G VGKS+L+ F + +T+ ++ ++ ++ L + D QD P
Sbjct: 7 LGAPGVGKSALARIFGGVED-GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLP 65
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
YV+VYS+T SFE L +L VPI+LVG
Sbjct: 66 GHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRAR-------------QTDDVPIILVG 112
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK DL R +S DEG+ A + F+E SA
Sbjct: 113 NKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHH 148
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 53.1 bits (126), Expect = 6e-10
Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 20/159 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G GKSSL +F+ G + + T + K ++ Q + + + + AG +
Sbjct: 11 LGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPDA---- 65
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
++S + V+S+ SF+ V L+ +L + + + LVG
Sbjct: 66 -KFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSL-----------RGEGRGGLALALVG 113
Query: 121 NKKDLHME--RMISYDEGKRLA-ESWKAGFVEASAKQDD 156
+ + R++ + L + + + E A
Sbjct: 114 TQDRISASSPRVVGDARARALCADMKRCSYYETCATYGL 152
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 51.3 bits (122), Expect = 3e-09
Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 5 SVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFPAQYS 64
GKS++ Q V T + T+ + + D GQ + Q
Sbjct: 16 ESGKSTIVKQMRILHVV----LTSG---IFETKFQVDKVNFHMFDVGGQRDERRKWIQCF 68
Query: 65 MDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVGNKKD 124
D+ + V + +S+ ++L + + S + + ++ ++L NK+D
Sbjct: 69 NDVTAIIFVVASSSYNMVIREDNQTNRLQEAL-NLFKSIWNNR--WLRTISVILFLNKQD 125
Query: 125 LHMERMIS 132
L E++++
Sbjct: 126 LLAEKVLA 133
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 50.4 bits (119), Expect = 4e-09
Identities = 30/157 (19%), Positives = 60/157 (38%), Gaps = 18/157 (11%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTR-MNNQDYDLKLVDTAGQDEYSIF 59
+G GK++ + + G+F Y T+ N + DTAGQ+++
Sbjct: 9 VGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGL 68
Query: 60 PAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLV 119
Y + ++++ +TS +++ V + L+ + I PIVL
Sbjct: 69 RDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENI---------------PIVLC 113
Query: 120 GNKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
GNK D+ ++ + + + SAK +
Sbjct: 114 GNKVDIKDRKVKAKS--IVFHRKKNLQYYDISAKSNY 148
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 50.0 bits (118), Expect = 6e-09
Identities = 24/159 (15%), Positives = 47/159 (29%), Gaps = 20/159 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK+++ + GQ V TI + ++ + D GQD+
Sbjct: 18 LGLDAAGKTTILYKLKLGQSVT----TIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLW 73
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y G + V + + ++++ + I++
Sbjct: 74 RHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND-------------REMRDAIILIFA 120
Query: 121 NKKDLHMER---MISYDEGKRLAESWKAGFVEASAKQDD 156
NK+DL I G + A D
Sbjct: 121 NKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGD 159
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 49.7 bits (117), Expect = 8e-09
Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 19/159 (11%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK++ GQF + PT+ ++ + +KL D GQ +
Sbjct: 8 VGLQYSGKTTFVNVIASGQFNEDMIPTV---GFNMRKITKGNVTIKLWDIGGQPRFRSMW 64
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+Y + V + + E + LLD + +P++++G
Sbjct: 65 ERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK-------------PQLQGIPVLVLG 111
Query: 121 NKKDLH---MERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK+DL E+ + + + S K+ D
Sbjct: 112 NKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKD 150
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 49.5 bits (117), Expect = 1e-08
Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 9/140 (6%)
Query: 2 GYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFPA 61
G GKS+ Q + + DPT + ++ K+VD GQ
Sbjct: 9 GAGESGKSTFLKQM---RIIHGQDPTK---GIHEYDFEIKNVPFKMVDVGGQRSERKRWF 62
Query: 62 QYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVGN 121
+ + + + S + + ++ L + I + V + S+V I+L N
Sbjct: 63 ECFDSVTSILFLVSSSEFDQVLMEDRQTNR-LTESLNIFETIVNNR--VFSNVSIILFLN 119
Query: 122 KKDLHMERMISYDEGKRLAE 141
K DL E++ E
Sbjct: 120 KTDLLEEKVQVVSIKDYFLE 139
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 49.2 bits (116), Expect = 2e-08
Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 11/153 (7%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G GKS++ Q + T +D K+ D GQ
Sbjct: 8 LGAGESGKSTIVKQMKIIHE-----AGT---GIVETHFTFKDLHFKMFDVGGQRSERKKW 59
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+ + +++ + +++ + + + I+L
Sbjct: 60 IHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNN---KWFTDTSIILFL 116
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAK 153
NKKDL E++ E + E +A
Sbjct: 117 NKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAA 149
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 48.1 bits (113), Expect = 5e-08
Identities = 22/161 (13%), Positives = 52/161 (32%), Gaps = 20/161 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G GK+ L ++ + GQ+ D+ +++ + N + + +
Sbjct: 6 VGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRFQLL 65
Query: 61 AQYSMDIHGYVLVYSITSHKSF--EVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVL 118
++ V V + + +V + LY L+D + +++
Sbjct: 66 DRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNS------------PSLLI 113
Query: 119 VGNKKDLHMERMISYD------EGKRLAESWKAGFVEASAK 153
NK+D+ M + E L + A +
Sbjct: 114 ACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSS 154
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 46.9 bits (110), Expect = 9e-08
Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 20/156 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK++L Q N + +Q + L + D GQ + +
Sbjct: 22 LGLDNAGKTTLLKQLASEDISHITPTQGFNIK----SVQSQGFKLNVWDIGGQRKIRPYW 77
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y + + V K FE +LL+ +S VP+++
Sbjct: 78 RSYFENTDILIYVIDSADRKRFEETGQELTELLEE-------------EKLSCVPVLIFA 124
Query: 121 NKKDLHMER---MISYDEGKRLAESWKAGFVEASAK 153
NK+DL I+ SA
Sbjct: 125 NKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSAL 160
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 44.6 bits (104), Expect = 7e-07
Identities = 22/159 (13%), Positives = 48/159 (30%), Gaps = 20/159 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK+++ QF + V + N + + + D GQ+
Sbjct: 21 VGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE----EIVINNTRFLMWDIGGQESLRSSW 76
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y + ++V T + V + K+L + +++
Sbjct: 77 NTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHE-------------DLRKAGLLIFA 123
Query: 121 NKKDL---HMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK+D+ IS + + A +
Sbjct: 124 NKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGE 162
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 43.0 bits (100), Expect = 3e-06
Identities = 23/150 (15%), Positives = 52/150 (34%), Gaps = 8/150 (5%)
Query: 5 SVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFPAQYS 64
GKS+ Q S PT + + Q ++VD GQ
Sbjct: 12 ESGKSTFIKQMRIIHG--SGVPTT---GIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCF 66
Query: 65 MDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVGNKKD 124
++ + + +++ + V +++ + + + + P + ++L NKKD
Sbjct: 67 ENVTSIMFLVALSEYDQVLVESDNENRMEESKALFR-TIITYP--WFQNSSVILFLNKKD 123
Query: 125 LHMERMISYDEGKRLAESWKAGFVEASAKQ 154
L E+++ E +A++
Sbjct: 124 LLEEKIMYSHLVDYFPEYDGPQRDAQAARE 153
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 41.9 bits (97), Expect = 6e-06
Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 20/159 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G GK+++ + G+ V + ++ ++ L + D GQ +
Sbjct: 23 LGLDGAGKTTILYRLQIGEVVTTKP----TIGFNVETLSYKNLKLNVWDLGGQTSIRPYW 78
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y D + V T +L + +++
Sbjct: 79 RCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQE-------------EELQDAALLVFA 125
Query: 121 NKKDL---HMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK+D +S + + V +SA + +
Sbjct: 126 NKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGE 164
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 41.2 bits (95), Expect = 9e-06
Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 20/159 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK+++ +F G+ VD+ PT+ + ++ + L + D GQ +
Sbjct: 8 LGLDNAGKTTILKKFN-GEDVDTISPTLGFNIK---TLEHRGFKLNIWDVGGQKSLRSYW 63
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y G + V + + Q LL ++ +++
Sbjct: 64 RNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVE-------------ERLAGATLLIFA 110
Query: 121 NKKDLHMERMIS---YDEGKRLAESWKAGFVEASAKQDD 156
NK+DL + S SA +
Sbjct: 111 NKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGE 149
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 40.8 bits (94), Expect = 2e-05
Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 20/159 (12%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G GK+++ + G+ V TI + ++ ++ D G +
Sbjct: 11 LGLDGAGKTTILYRLQVGEVVT----TIPTIGFNVETVTYKNLKFQVWDLGGLTSIRPYW 66
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y + + V + + +L+ + +V+
Sbjct: 67 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEE-------------ELRKAILVVFA 113
Query: 121 NKKDLHMERMIS---YDEGKRLAESWKAGFVEASAKQDD 156
NK+D+ S G + K + SA +
Sbjct: 114 NKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGT 152
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 37.8 bits (86), Expect = 2e-04
Identities = 19/154 (12%), Positives = 45/154 (29%), Gaps = 7/154 (4%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK++L + + PT T + + + D G +
Sbjct: 6 LGLDNAGKTTLLHMLKNDRLAT-LQPTWHPTSEE---LAIGNIKFTTFDLGGHIQARRLW 61
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
Y +++G V + + F+ ++ D L ++ V + +
Sbjct: 62 KDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAE 121
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQ 154
+ L + +R+ S
Sbjct: 122 LRSALGLLNTT---GSQRIEGQRPVEVFMCSVVM 152
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 36.9 bits (84), Expect = 3e-04
Identities = 23/164 (14%), Positives = 42/164 (25%), Gaps = 18/164 (10%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
G ++ GK+SL + + D
Sbjct: 9 AGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLVDFPGHVKLRYKLSDYLK 68
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+ +V S K +L +T + + I++
Sbjct: 69 TRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCE----------NGIDILIAC 118
Query: 121 NKKDLHMERMISYD------EGKRLAESWKAG--FVEASAKQDD 156
NK +L R S E +++ E K VE ++D
Sbjct: 119 NKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEED 162
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 34.7 bits (78), Expect = 0.002
Identities = 14/155 (9%), Positives = 38/155 (24%), Gaps = 6/155 (3%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G + GK++L D + + + D G +
Sbjct: 19 LGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSE----ELTIAGMTFTTFDLGGHIQARRVW 74
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQ--ILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVL 118
Y I+G V + H+ + + + + + + ++
Sbjct: 75 KNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEER 134
Query: 119 VGNKKDLHMERMISYDEGKRLAESWKAGFVEASAK 153
+ L+ + + + S
Sbjct: 135 LREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVL 169
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 29.7 bits (66), Expect = 0.15
Identities = 21/166 (12%), Positives = 45/166 (27%), Gaps = 30/166 (18%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTR-----MNNQDYDLKLVDTAGQDE 55
G GKSS I + G + + V+ T + ++ D G
Sbjct: 62 TGETGSGKSSF-INTLRGIGNEEEG-AAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGS 119
Query: 56 YSIFPAQY--SMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSS 113
+ P Y M + Y I++ + + + + M
Sbjct: 120 TNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMM-----------------K 162
Query: 114 VPIVLVGNKKDLHM----ERMISYDEGKRLAESWKAGFVEASAKQD 155
V K D + + + +++ + + V +
Sbjct: 163 KEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENG 208
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 27.4 bits (59), Expect = 0.58
Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 14/156 (8%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
G + GKSSL + D V ++ L ++DTA
Sbjct: 7 AGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTA-------GL 59
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+ S ++ + + + + V + D + + +PI +V
Sbjct: 60 REASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVR 119
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQDD 156
NK D+ E ++E + SA+ +
Sbjct: 120 NKADIT-------GETLGMSEVNGHALIRLSARTGE 148
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 27.4 bits (59), Expect = 0.68
Identities = 21/167 (12%), Positives = 45/167 (26%), Gaps = 19/167 (11%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
G +VGKS+L + + P + ++ N++ D+ +
Sbjct: 6 AGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKEVQE 65
Query: 61 AQYSMDIHGYVLVYSIT---------SHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCV 111
+H + + + + + +
Sbjct: 66 RIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRE------ 119
Query: 112 SSVPIVLVGNKKDL---HMERMISYDEGKRLAES-WKAGFVEASAKQ 154
+P ++ NK D E + E + S F+ SAK
Sbjct: 120 LDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKF 166
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 27.3 bits (60), Expect = 0.82
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 7/100 (7%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENT-----FVKTTRMNNQDYDLKLVDTAGQDE 55
+G GKS L + + S T+++ + L L+DT G +
Sbjct: 38 VGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGD 97
Query: 56 YSIFPAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDM 95
Q I + L ++S + + + + +D
Sbjct: 98 VEKGDNQNDSWI--FALAVLLSSTFVYNSIGTINQQAMDQ 135
>d2aqaa1 g.41.16.1 (A:2-58) H/aca ribonucleoprotein complex
subunit 3 {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 57
Score = 24.3 bits (53), Expect = 2.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 39 NNQDYDLKLVDTAGQDEYSIFPAQYSMD 66
+ Y LK V +G+ S PA++S D
Sbjct: 10 GKRIYTLKKVTESGEITKSAHPARFSPD 37
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 25.1 bits (53), Expect = 3.9
Identities = 24/154 (15%), Positives = 53/154 (34%), Gaps = 9/154 (5%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G +VGKS+L + + GQ +I + +TTR + A Q Y P
Sbjct: 11 VGRPNVGKSTL-LNKLLGQ-----KISITSRKAQTTRHRIVGIH---TEGAYQAIYVDTP 61
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+ + + + + S V+++ + + V + + I+ V
Sbjct: 62 GLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVN 121
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQ 154
++ + + ++ V SA+
Sbjct: 122 KVDNVQEKADLLPHLQFLASQMNFLDIVPISAET 155
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 25.0 bits (53), Expect = 4.1
Identities = 21/154 (13%), Positives = 45/154 (29%), Gaps = 1/154 (0%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDEYSIFP 60
+G +VGKS+L ++ + + VDTAG S
Sbjct: 14 VGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRRKSRVE 73
Query: 61 AQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCVSSVPIVLVG 120
+ Y +V SI +V + ++ + + V +
Sbjct: 74 PRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFNKWDLV 133
Query: 121 NKKDLHMERMISYDEGKRLAESWKAGFVEASAKQ 154
++ + ++L + + SA +
Sbjct: 134 VHREKRYDEFTKLFR-EKLYFIDYSPLIFTSADK 166
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle
domain {Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 25.0 bits (53), Expect = 4.7
Identities = 12/54 (22%), Positives = 18/54 (33%)
Query: 2 GYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAGQDE 55
GY + GKSSL + P + +++ L D G E
Sbjct: 8 GYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIE 61
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 24.2 bits (51), Expect = 7.3
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 1 MGYRSVGKSSLSIQFVDGQFVDSYDPTIENTFVKTTRMNNQDYDLKLVDTAG 52
+G +VGKS+L + ++ D V + + + ++VDTAG
Sbjct: 6 VGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAG 57
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 88
Score = 23.6 bits (51), Expect = 7.4
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 45 LKLVDTAGQDEYSIFPAQYSMDIHGYVLVYSITSHKSFEVVQIL 88
LK G + F +++ + + V S E +IL
Sbjct: 18 LKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEIL 61
>d1k8wa5 d.265.1.2 (A:9-250) Pseudouridine synthase II TruB
{Escherichia coli [TaxId: 562]}
Length = 242
Score = 24.4 bits (52), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 65 MDIHGYVLVYSITSHKSFEVVQIL 88
MDI+G +L+ S + +Q +
Sbjct: 1 MDINGVLLLDKPQGMSSNDALQKV 24
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 24.4 bits (52), Expect = 7.8
Identities = 19/144 (13%), Positives = 40/144 (27%), Gaps = 21/144 (14%)
Query: 1 MGYRSVGKSSL--SIQFVDGQFVDSYDPTIENTFVKTTRMNNQD----YDLKLVDTAGQD 54
MG VGKSS SI + + + + L++ +
Sbjct: 38 MGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYIN 97
Query: 55 EY---SIFPAQYSMDIHGYVLVYSITSHKSFEVVQILYDKLLDMTGKIQNSSVKSPTSCV 111
+ I I + V + +++ + +++ + D GK
Sbjct: 98 DMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGK------------G 145
Query: 112 SSVPIVLVGNKKDLHMERMISYDE 135
++ + YDE
Sbjct: 146 IWNKAIVALTHAQFSPPDGLPYDE 169
>d1un8a4 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citrobacter
freundii [TaxId: 546]}
Length = 335
Score = 24.1 bits (52), Expect = 9.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 62 QYSMDIHGYVLVYSITSHKSFEVVQILYDKLLD 94
+ M IHG I + S +VV ++ DKLL
Sbjct: 214 ELGMGIHGEPGASVIDTQNSAQVVNLMVDKLLA 246
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.131 0.370
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 544,880
Number of extensions: 22021
Number of successful extensions: 193
Number of sequences better than 10.0: 1
Number of HSP's gapped: 127
Number of HSP's successfully gapped: 75
Length of query: 157
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 79
Effective length of database: 1,336,656
Effective search space: 105595824
Effective search space used: 105595824
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.3 bits)