Query psy1878
Match_columns 98
No_of_seqs 106 out of 699
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 18:35:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hg3_A Alpha-galactosidase A; 99.9 1.5E-26 5.1E-31 183.6 4.2 85 10-95 159-243 (404)
2 3lrk_A Alpha-galactosidase 1; 99.9 6.6E-25 2.3E-29 177.3 2.4 75 10-95 173-270 (479)
3 1szn_A Alpha-galactosidase; (b 99.7 1.1E-18 3.6E-23 138.1 4.5 74 11-95 191-265 (417)
4 3a5v_A Alpha-galactosidase; be 99.7 3.7E-19 1.3E-23 139.8 1.9 73 12-95 155-248 (397)
5 1uas_A Alpha-galactosidase; TI 99.7 8.5E-18 2.9E-22 129.9 4.3 73 12-95 151-224 (362)
6 3cc1_A BH1870 protein, putativ 99.7 6.9E-18 2.3E-22 133.7 2.1 73 11-93 206-279 (433)
7 4do4_A Alpha-N-acetylgalactosa 99.6 4.6E-16 1.6E-20 119.9 3.0 87 10-96 158-244 (400)
8 3a21_A Putative secreted alpha 99.5 3.1E-15 1E-19 122.4 4.9 70 12-95 169-246 (614)
9 1zy9_A Alpha-galactosidase; TM 98.9 5.2E-11 1.8E-15 97.3 -1.0 72 7-93 364-445 (564)
10 2xn2_A Alpha-galactosidase; hy 96.2 0.0029 9.8E-08 53.1 3.6 66 12-94 519-585 (732)
11 4fnq_A Alpha-galactosidase AGA 93.4 0.06 2.1E-06 45.0 3.7 69 14-96 517-586 (729)
12 2f2h_A Putative family 31 gluc 29.7 52 0.0018 27.6 4.0 36 15-65 459-495 (773)
13 2g3m_A Maltase, alpha-glucosid 25.6 51 0.0017 27.2 3.3 36 15-65 393-429 (693)
No 1
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=99.92 E-value=1.5e-26 Score=183.60 Aligned_cols=85 Identities=41% Similarity=0.659 Sum_probs=71.7
Q ss_pred cccccCcceEEEcCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878 10 ICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89 (98)
Q Consensus 10 ~~~~~~RpIvySCsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML 89 (98)
.+..+||||+|||+||.+.... ..|+|++++++|||||+++||+++|+++.++++.+...++.+++|+|||+|||||||
T Consensus 159 AL~~tGRpi~~sc~w~~~~~~~-~~~~~~~~~~~~n~WR~~~Di~d~W~sv~~i~~~~~~~~~~~~~~agpG~wnDpDML 237 (404)
T 3hg3_A 159 ALNRTGRSIVYSCEWPLYMWPF-QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDML 237 (404)
T ss_dssp HHHHTTCCCEEEECTGGGGTTT-SCCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTHHHHTTTCBTTBEEECCCB
T ss_pred HHHhcCCCEEEEeCCCcccccc-cccchHHHhhhCcEEEecCCcCcchHHHHHHHHHHhhhhhhhHhhcCCCCcCCCcce
Confidence 3467899999999998754111 135788889999999999999999999999998755456789999999999999999
Q ss_pred cccCCC
Q psy1878 90 KSYLDY 95 (98)
Q Consensus 90 ~VG~~~ 95 (98)
+||+.+
T Consensus 238 ~vGn~g 243 (404)
T 3hg3_A 238 VIGNFG 243 (404)
T ss_dssp CTTSSS
T ss_pred ecCCCC
Confidence 999864
No 2
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=99.90 E-value=6.6e-25 Score=177.29 Aligned_cols=75 Identities=21% Similarity=0.253 Sum_probs=67.1
Q ss_pred cccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHH----------------------HHHHHHHh
Q psy1878 10 ICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQ----------------------SLESIIDY 66 (98)
Q Consensus 10 ~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~----------------------sv~~~~d~ 66 (98)
.+..+||||+|| |+||... + |.|++++|||||+++||+++|+ +|..+++.
T Consensus 173 AL~~tGRpI~~Slc~Wg~~~------~-~~w~~~~~n~WR~s~DI~d~W~~~~~~~~~~~~~~~~~~~g~~~sv~~i~~~ 245 (479)
T 3lrk_A 173 ALNKTGRPVFYSLCNWGQDL------T-FYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILNK 245 (479)
T ss_dssp HHHHHCSCCEEEECSTTTTT------H-HHHSTTTCSEEECSSCBCSCSSCCCTTSCSCTTCSSCSCCCSCBCHHHHHHH
T ss_pred HHHHhCCCeEEEeccCccCc------h-hhhhhhhCCeeeecCCccccccccccccccccccccccccccchhHHHHHHH
Confidence 346789999999 9999875 4 8999999999999999999997 68888885
Q ss_pred hccccCcccCCCCCCCCCCcccccccCCC
Q psy1878 67 YGNNQDTIVPNAGPGHWNDPDMVKSYLDY 95 (98)
Q Consensus 67 ~~~~~~~~~~~agPG~wNDpDML~VG~~~ 95 (98)
++.++.+++||+|||||||+||+++
T Consensus 246 ----~~~~~~~agpG~wNDpDML~vGn~g 270 (479)
T 3lrk_A 246 ----AAPMGQNAGVGGWNDLDNLEVGVGN 270 (479)
T ss_dssp ----HGGGGGGCBTTBEEECCSBCTTSTT
T ss_pred ----hhhhhhccCCCCCCCCCeEeeCCCC
Confidence 6789999999999999999999864
No 3
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=99.73 E-value=1.1e-18 Score=138.15 Aligned_cols=74 Identities=18% Similarity=0.134 Sum_probs=65.8
Q ss_pred ccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878 11 CPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89 (98)
Q Consensus 11 ~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML 89 (98)
+...+|||+|| |+||... + +.|+.+++|+||+++||.|.|+++.++++. +..+.++++||+|||||||
T Consensus 191 L~~~~~~i~~~~C~~G~~~------~-~~w~~~~~n~wR~s~D~~d~w~~~~~i~~~----~~~~~~~~~~g~~~D~DmL 259 (417)
T 1szn_A 191 LAKQSHEIVLSMCIWGQAD------V-FSWGNSTGISWRMSDDISPNWGSVTRILNL----NSFKLNSVDFWGHNDADML 259 (417)
T ss_dssp HHTSSSCCEEEECCTTGGG------H-HHHGGGTCSEEECSSCCCSSHHHHHHHHHH----HHTCGGGCBTTBEEECCSC
T ss_pred HHHhCCCEEEEeCCCCCCc------c-hhhHhhcccceeecCCccccHHHHHHHHHH----HhhhcccccCccccCCccc
Confidence 34678999999 9999875 4 788999999999999999999999999874 5688899999999999999
Q ss_pred cccCCC
Q psy1878 90 KSYLDY 95 (98)
Q Consensus 90 ~VG~~~ 95 (98)
+||+++
T Consensus 260 ~vg~~~ 265 (417)
T 1szn_A 260 EVGNGN 265 (417)
T ss_dssp CTTCTT
T ss_pred ccCCCC
Confidence 999764
No 4
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=99.73 E-value=3.7e-19 Score=139.76 Aligned_cols=73 Identities=23% Similarity=0.312 Sum_probs=64.5
Q ss_pred cccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHH--------------------HHHHHHHhhccc
Q psy1878 12 PVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQ--------------------SLESIIDYYGNN 70 (98)
Q Consensus 12 ~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~--------------------sv~~~~d~~~~~ 70 (98)
..++|||+|| |+||... + +.|+++++|+||+++||.++|+ ++.++++.
T Consensus 155 ~~~~~~i~~~~c~~G~~~------~-~~w~~~~~n~wR~s~Di~~~w~~~~~~~~~~~~~~~~~~~~~s~~~~~~~---- 223 (397)
T 3a5v_A 155 NKTGRPMLYSLCNWGEDG------P-WNFASTISNSWRISGDVYDNFNRPDPACPCTTYDCVLAGFRCSVMNIINK---- 223 (397)
T ss_dssp HHTCSCCEEEECSTTTTC------H-HHHSTTTCSEEECSSCBCSCSSCCCTTSCCCSSCCSCCCSCBCHHHHHHH----
T ss_pred HhhCCCcEEEeccCCCCc------h-hhHHhhcCcEEEEcCCcCCccccccccccccccccccccccchHHHHHHH----
Confidence 4568999999 9999865 3 7889999999999999999998 68888874
Q ss_pred cCcccCCCCCCCCCCcccccccCCC
Q psy1878 71 QDTIVPNAGPGHWNDPDMVKSYLDY 95 (98)
Q Consensus 71 ~~~~~~~agPG~wNDpDML~VG~~~ 95 (98)
+..+..+++||+|||||||+||++.
T Consensus 224 ~~~~~~~~~pg~~nD~Dml~vg~~~ 248 (397)
T 3a5v_A 224 AVAVSQKARSGGWNDLDMLEVGNGG 248 (397)
T ss_dssp HHHHGGGCBTTBEEECCCBCTTSSS
T ss_pred hhhhHhhcCCCccCCccccccCCCC
Confidence 5688999999999999999999754
No 5
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=99.69 E-value=8.5e-18 Score=129.90 Aligned_cols=73 Identities=32% Similarity=0.438 Sum_probs=65.0
Q ss_pred cccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccccc
Q psy1878 12 PVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90 (98)
Q Consensus 12 ~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML~ 90 (98)
...+|+|+|| |+||.+. | +.|..+++|+||+++|+.++|+++..+++. ++.+..+++||+|||||||+
T Consensus 151 ~~~~~~i~~~~c~~g~~~------p-~~w~~~~~n~~R~~~D~~~~w~~~~~~~~~----~~~~~~~~~pg~~~D~Dml~ 219 (362)
T 1uas_A 151 KTYGKNIFFSLCEWGKEN------P-ATWAGRMGNSWRTTGDIADNWGSMTSRADE----NDQWAAYAGPGGWNDPDMLE 219 (362)
T ss_dssp HHHCTTSEEEEESTTTTC------G-GGTGGGTCSEEECSSCCCSSHHHHHHHHHH----HHTTGGGCBTTBEEECCCCC
T ss_pred HhhCCCcEEEecCCCCCC------h-HHHHhhheeEEEecCCCCcCchhHHHHHHH----HHHHHHhcCCCcccCcchhe
Confidence 4568999999 9999876 4 788899999999999999999999999874 56888999999999999999
Q ss_pred ccCCC
Q psy1878 91 SYLDY 95 (98)
Q Consensus 91 VG~~~ 95 (98)
||+.+
T Consensus 220 vg~~~ 224 (362)
T 1uas_A 220 VGNGG 224 (362)
T ss_dssp TTSSS
T ss_pred eCCCC
Confidence 99754
No 6
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=99.68 E-value=6.9e-18 Score=133.70 Aligned_cols=73 Identities=19% Similarity=0.276 Sum_probs=60.2
Q ss_pred ccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878 11 CPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89 (98)
Q Consensus 11 ~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML 89 (98)
+..++|||+|| |..+... ..+.|+.+++|+||+++||+++|+++.++++. ++.++.+++||+|||||||
T Consensus 206 L~~~gr~i~~slc~g~~~~------~~~~~~~~~~n~wR~s~D~~~~w~~~~~~~~~----~~~~~~~~~~g~~nD~Dml 275 (433)
T 3cc1_A 206 IQACGRPMVLSLSPGPAPI------KYAHHFKTNANMWRITDDFWDDWSLLYQMFER----CEVWEKHIGTGHWPDCGML 275 (433)
T ss_dssp HHHSSSCCEEECCCSBSSE------ESCSSSCCTTGGGCCEECCCSCHHHHHHHHHH----HHHHHHSCCCSCCCBCCCB
T ss_pred HHhcCCCEEEEecCCCCCh------hhhhhhhhhCcEEEeccCccccHHHHHHHHHH----HHHHHhhcCCCccCChHHh
Confidence 34679999999 5532221 12557789999999999999999999999985 4578899999999999999
Q ss_pred cccC
Q psy1878 90 KSYL 93 (98)
Q Consensus 90 ~VG~ 93 (98)
+||.
T Consensus 276 ~vg~ 279 (433)
T 3cc1_A 276 PLGH 279 (433)
T ss_dssp CCSE
T ss_pred cccC
Confidence 9995
No 7
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=99.58 E-value=4.6e-16 Score=119.92 Aligned_cols=87 Identities=36% Similarity=0.622 Sum_probs=71.0
Q ss_pred cccccCcceEEEcCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878 10 ICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89 (98)
Q Consensus 10 ~~~~~~RpIvySCsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML 89 (98)
.+...+|||+|||+|+.+.........+.|..+++|+||+++||.+.|.++..+.+.....+..+..+++||+|||||||
T Consensus 158 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~Di~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~d~d~l 237 (400)
T 4do4_A 158 ALNATGRPIAFSCSWPAYEGGLPPRVQYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDML 237 (400)
T ss_dssp HHHHTCSCCEEEECGGGGTTSSTTTCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTHHHHGGGCBTTBEEECCCC
T ss_pred HHHHhCccceecccccccccccccccchhhcccccccccccCcccCcccchhhHHHHHHHHhHHhhhhcCCCCCCCCccc
Confidence 45678999999988776553323334588889999999999999999999998877654456778899999999999999
Q ss_pred cccCCCC
Q psy1878 90 KSYLDYD 96 (98)
Q Consensus 90 ~VG~~~~ 96 (98)
++|+...
T Consensus 238 ~~~~~~~ 244 (400)
T 4do4_A 238 LIGNFGL 244 (400)
T ss_dssp CTTSSSC
T ss_pred cccCCCC
Confidence 9998653
No 8
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=99.54 E-value=3.1e-15 Score=122.39 Aligned_cols=70 Identities=23% Similarity=0.282 Sum_probs=57.5
Q ss_pred cccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccH-------HHHHHHHHhhccccCcccCCCCCCCC
Q psy1878 12 PVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSW-------QSLESIIDYYGNNQDTIVPNAGPGHW 83 (98)
Q Consensus 12 ~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W-------~sv~~~~d~~~~~~~~~~~~agPG~w 83 (98)
..++|||+|| |+||... + +.|+.+++|+||+++||. .| ..+..+++. +..+. ++||+|
T Consensus 169 ~~~gr~i~~s~c~~g~~~------~-~~~~~~~~~~wR~~~Di~-~~~~~~~~~~~~~~~~~~----~~~~~--~~pg~~ 234 (614)
T 3a21_A 169 ATTGRPLTLSICNWGYQN------P-WNWAAGQAPLWRTSTDII-YYGNQPSMTSLLSNFDQT----LHPTA--QHTGYY 234 (614)
T ss_dssp HHHSCCCEEEECCTTTTC------G-GGTCTTTCSEEECSSCSC-CTTSCCCHHHHHHHHHHH----CCTTT--CBTTBE
T ss_pred HhcCCCeEEEecCCccCC------h-hhhhhccCcccccccccc-cccccCchHHHHHHHHHh----hhHHh--hCCCcc
Confidence 5569999999 9999876 3 778889999999999999 55 566666653 44555 899999
Q ss_pred CCcccccccCCC
Q psy1878 84 NDPDMVKSYLDY 95 (98)
Q Consensus 84 NDpDML~VG~~~ 95 (98)
||||||+||++.
T Consensus 235 nD~Dml~~g~~~ 246 (614)
T 3a21_A 235 NDPDMLMVGMDG 246 (614)
T ss_dssp EECCSCCTTCTT
T ss_pred cCCCeeeeCCCC
Confidence 999999999754
No 9
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=98.95 E-value=5.2e-11 Score=97.35 Aligned_cols=72 Identities=13% Similarity=-0.039 Sum_probs=51.8
Q ss_pred eeecccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHH---------HHHhhccccCcccC
Q psy1878 7 FKTICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLES---------IIDYYGNNQDTIVP 76 (98)
Q Consensus 7 ~~~~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~---------~~d~~~~~~~~~~~ 76 (98)
++.|.+..+|+|+++ |+||... ..+.+|+||+++||.+.|.++.. .+.. ....+..
T Consensus 364 l~~l~~~~pr~i~i~~C~~g~~~-----------s~~~~n~~Ris~Di~~~W~s~~~~~~~p~~~~~~~n---~~~~~~~ 429 (564)
T 1zy9_A 364 IETIRKAVGEDSFILGCGSPLLP-----------AVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWALRN---AITRYFM 429 (564)
T ss_dssp HHHHHHHHCTTSEEEECSCBSGG-----------GTTTCSEEECSSCCCSSCCTTSCSSSSSCHHHHHHH---HHHTGGG
T ss_pred HHHHHhhCCCCeEEEecCCcccc-----------cccccceEEEcCCccccccccccccccHHHHHHHHH---HHHHHhh
Confidence 345667778789998 9998532 15789999999999998887531 1111 1234555
Q ss_pred CCCCCCCCCcccccccC
Q psy1878 77 NAGPGHWNDPDMVKSYL 93 (98)
Q Consensus 77 ~agPG~wNDpDML~VG~ 93 (98)
+++| +|||||||+||.
T Consensus 430 ~~~~-~~nDPDml~vg~ 445 (564)
T 1zy9_A 430 HDRF-WLNDPDCLILRE 445 (564)
T ss_dssp BTTT-BEEECCCBCCCS
T ss_pred ccCC-cccCCCEeEecC
Confidence 6677 799999999997
No 10
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=96.24 E-value=0.0029 Score=53.05 Aligned_cols=66 Identities=12% Similarity=0.063 Sum_probs=48.2
Q ss_pred cccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccccc
Q psy1878 12 PVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90 (98)
Q Consensus 12 ~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML~ 90 (98)
...+++|+|+ |+||... .++.......+.|+ +|+.+.|+++. +.. . ..+.-|+.+++++|+.
T Consensus 519 ~~~~p~i~~~~C~~Gg~r------~d~g~l~~~~~~W~--sD~~d~~~r~~-i~~-------g-~s~~~P~~~~~~~~~~ 581 (732)
T 2xn2_A 519 VTRYPDILFEGCSGGGGR------FDVGQAYYTPQIWA--SDNTDAIERLK-IQY-------G-TSLVYPQSMMTSHVSV 581 (732)
T ss_dssp HHHCTTSEEEECBTBBTT------CSHHHHTTCSEEEC--BSCCCHHHHHH-HHH-------H-HTTTSCGGGEEEEEEC
T ss_pred HHhCCCcEEEEecCcccc------cCchhhcccceEEC--CCCcCHHHHHH-Hhc-------c-hhhcCCcccCCCCEEe
Confidence 3457899999 9998754 34555556678886 69999998762 211 1 1356799999999999
Q ss_pred ccCC
Q psy1878 91 SYLD 94 (98)
Q Consensus 91 VG~~ 94 (98)
+|++
T Consensus 582 ~pn~ 585 (732)
T 2xn2_A 582 SPNE 585 (732)
T ss_dssp SSCT
T ss_pred eCCC
Confidence 9976
No 11
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=93.36 E-value=0.06 Score=44.96 Aligned_cols=69 Identities=6% Similarity=-0.106 Sum_probs=45.8
Q ss_pred cCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccccccc
Q psy1878 14 AIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSY 92 (98)
Q Consensus 14 ~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML~VG 92 (98)
..++|+|+ |+||... . +.+....++.+++++|..+.+. +.-.. ...+.-.+++++++++||+..+
T Consensus 517 ~~P~i~ie~C~~Gg~r------~-d~~~l~~~~~~w~SD~~d~~~r-~~i~~------g~s~~~p~~~~g~hv~~~~~~~ 582 (729)
T 4fnq_A 517 RFPHILFESCSGGGGR------F-DPGMLYYMPQTWTSDNTDAVSR-LKIQY------GTSLVYPISAMGAHVSAVPNHQ 582 (729)
T ss_dssp HCTTCEEEEEBTBBTT------C-SHHHHTTSSEEECBSCCCHHHH-HHHHH------HHTTTSCGGGEEEEEECSSCSS
T ss_pred HCCCcEEEcccCCCCC------c-cchhhhcccceeecCCcchHHH-HHHHh------chhcccCchhcccCccCCcccC
Confidence 45799999 9999865 3 3345566777777877654432 22111 1234445778899999999988
Q ss_pred CCCC
Q psy1878 93 LDYD 96 (98)
Q Consensus 93 ~~~~ 96 (98)
.++.
T Consensus 583 ~gr~ 586 (729)
T 4fnq_A 583 VGRV 586 (729)
T ss_dssp SCCC
T ss_pred CcCc
Confidence 7664
No 12
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=29.70 E-value=52 Score=27.58 Aligned_cols=36 Identities=11% Similarity=0.215 Sum_probs=26.0
Q ss_pred CcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHH
Q psy1878 15 IGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIID 65 (98)
Q Consensus 15 ~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d 65 (98)
.||++++ +.+...+ ..+..| ++|...+|+++...+.
T Consensus 459 ~rp~ilsRS~~aGsq-------------Ry~~~W--sGDn~s~W~~L~~si~ 495 (773)
T 2f2h_A 459 EEAVLFARSASVGAQ-------------KFPVHW--GGDCYANYESMAESLR 495 (773)
T ss_dssp GGCCEEESCBCTTGG-------------GSCCEE--CCCCCSSHHHHHHHHH
T ss_pred CCceEEeecccCccC-------------CCceEe--CCCCcchHHHHHHHHH
Confidence 5899999 6665433 125578 8999999998766553
No 13
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=25.64 E-value=51 Score=27.20 Aligned_cols=36 Identities=17% Similarity=0.333 Sum_probs=25.6
Q ss_pred CcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHH
Q psy1878 15 IGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIID 65 (98)
Q Consensus 15 ~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d 65 (98)
.||++++ +.+...+ ..+..| ++|...+|+++...+.
T Consensus 393 ~RpfilsRS~~aGsq-------------ry~~~W--~GD~~s~W~~L~~~i~ 429 (693)
T 2g3m_A 393 NEIFILSRAGYAGIQ-------------RYAFIW--TGDNTPSWDDLKLQLQ 429 (693)
T ss_dssp CSCCEEESCEETTGG-------------GTCEEE--CCSCCCSHHHHHHHHH
T ss_pred CCcEEEEccccCCCC-------------CCcccc--CCCcccCHHHHHHHHH
Confidence 5999999 6554433 124567 8999999998766554
Done!