BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1882
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JHT5|AMMR1_MOUSE AMME syndrome candidate gene 1 protein homolog OS=Mus musculus
GN=Ammecr1 PE=2 SV=1
Length = 344
Score = 270 bits (691), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Query: 35 SVDKIAQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKIGKDQRLRGCIGTF 94
S + EMC FCFDVLYCHL+ + P P +N+ +PLFVTWKIG+D+RLRGCIGTF
Sbjct: 132 SRKMVVSAEMCCFCFDVLYCHLYGYQQPRTPR-FTNEPYPLFVTWKIGRDKRLRGCIGTF 190
Query: 95 NAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGI 154
+A+NLH GLREY +TSA KDSRF P+T DE +L SVS+L +FED DY DW++GVHGI
Sbjct: 191 SAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGI 250
Query: 155 RIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQS 214
RIEF NE+G+KRTATYLPEVA EQGWD IQTIDSLLRKGG+K PIT + R IKLTRY+S
Sbjct: 251 RIEFINEKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRS 310
Query: 215 ELVSVSYQDYLNH 227
E +++SY +YL H
Sbjct: 311 EKMTLSYAEYLAH 323
>sp|Q5RAS7|AMMR1_PONAB AMME syndrome candidate gene 1 protein homolog OS=Pongo abelii
GN=AMMECR1 PE=2 SV=1
Length = 333
Score = 270 bits (691), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Query: 35 SVDKIAQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKIGKDQRLRGCIGTF 94
S + EMC FCFDVLYCHL+ + P P +N+ +PLFVTWKIG+D+RLRGCIGTF
Sbjct: 121 SRKMVVSAEMCCFCFDVLYCHLYGYQQPRTPR-FTNEPYPLFVTWKIGRDKRLRGCIGTF 179
Query: 95 NAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGI 154
+A+NLH GLREY +TSA KDSRF P+T DE +L SVS+L +FED DY DW++GVHGI
Sbjct: 180 SAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGI 239
Query: 155 RIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQS 214
RIEF NE+G+KRTATYLPEVA EQGWD IQTIDSLLRKGG+K PIT + R IKLTRY+S
Sbjct: 240 RIEFINEKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRS 299
Query: 215 ELVSVSYQDYLNH 227
E +++SY +YL H
Sbjct: 300 EKMTLSYAEYLAH 312
>sp|Q9Y4X0|AMMR1_HUMAN AMME syndrome candidate gene 1 protein OS=Homo sapiens GN=AMMECR1
PE=2 SV=1
Length = 333
Score = 270 bits (691), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Query: 35 SVDKIAQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKIGKDQRLRGCIGTF 94
S + EMC FCFDVLYCHL+ + P P +N+ +PLFVTWKIG+D+RLRGCIGTF
Sbjct: 121 SRKMVVSAEMCCFCFDVLYCHLYGYQQPRTPR-FTNEPYPLFVTWKIGRDKRLRGCIGTF 179
Query: 95 NAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGI 154
+A+NLH GLREY +TSA KDSRF P+T DE +L SVS+L +FED DY DW++GVHGI
Sbjct: 180 SAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGI 239
Query: 155 RIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQS 214
RIEF NE+G+KRTATYLPEVA EQGWD IQTIDSLLRKGG+K PIT + R IKLTRY+S
Sbjct: 240 RIEFINEKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRS 299
Query: 215 ELVSVSYQDYLNH 227
E +++SY +YL H
Sbjct: 300 EKMTLSYAEYLAH 312
>sp|Q8JZZ6|AMERL_MOUSE AMMECR1-like protein OS=Mus musculus GN=Ammecr1l PE=2 SV=1
Length = 310
Score = 270 bits (691), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 153/192 (79%), Gaps = 1/192 (0%)
Query: 34 SSVDKIAQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKIGKDQRLRGCIGT 93
S+ + + EMC +CFDVLYCHL+ P P +ND +PLFVTWK G+D+RLRGCIGT
Sbjct: 98 STKNLVVTAEMCCYCFDVLYCHLYGFPQPRLPR-FTNDPYPLFVTWKTGRDKRLRGCIGT 156
Query: 94 FNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHG 153
F+A+NLH GLREY +TSA KDSRF P+T +E KL SVS+L +FED +DY DW++GVHG
Sbjct: 157 FSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHG 216
Query: 154 IRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQ 213
IRIEF NE+G KRTATYLPEVA EQ WDQIQTIDSLLRKGGFK PIT + R +IKLTRY+
Sbjct: 217 IRIEFINEKGIKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKSIKLTRYR 276
Query: 214 SELVSVSYQDYL 225
SE V++SY +Y+
Sbjct: 277 SEKVTISYAEYI 288
>sp|Q5RDQ3|AMERL_PONAB AMMECR1-like protein OS=Pongo abelii GN=AMMECR1L PE=2 SV=1
Length = 310
Score = 270 bits (689), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
Query: 39 IAQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKIGKDQRLRGCIGTFNAIN 98
+ EMC +CFDVLYCHL+ P P +ND +PLFVTWK G+D+RLRGCIGTF+A+N
Sbjct: 103 VVTAEMCCYCFDVLYCHLYGFPQPRLPR-FTNDPYPLFVTWKTGRDKRLRGCIGTFSAMN 161
Query: 99 LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGIRIEF 158
LH GLREY +TSA KDSRF P+T +E KL SVS+L +FED +DY DW++GVHGIRIEF
Sbjct: 162 LHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEF 221
Query: 159 HNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQSELVS 218
NE+G KRTATYLPEVA EQ WDQIQTIDSLLRKGGFK PIT + R IKLTRY+SE V+
Sbjct: 222 INEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVT 281
Query: 219 VSYQDYL 225
+SY +Y+
Sbjct: 282 ISYAEYI 288
>sp|Q6DCA0|AMERL_HUMAN AMMECR1-like protein OS=Homo sapiens GN=AMMECR1L PE=1 SV=1
Length = 310
Score = 270 bits (689), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
Query: 39 IAQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKIGKDQRLRGCIGTFNAIN 98
+ EMC +CFDVLYCHL+ P P +ND +PLFVTWK G+D+RLRGCIGTF+A+N
Sbjct: 103 VVTAEMCCYCFDVLYCHLYGFPQPRLPR-FTNDPYPLFVTWKTGRDKRLRGCIGTFSAMN 161
Query: 99 LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGIRIEF 158
LH GLREY +TSA KDSRF P+T +E KL SVS+L +FED +DY DW++GVHGIRIEF
Sbjct: 162 LHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEF 221
Query: 159 HNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQSELVS 218
NE+G KRTATYLPEVA EQ WDQIQTIDSLLRKGGFK PIT + R IKLTRY+SE V+
Sbjct: 222 INEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVT 281
Query: 219 VSYQDYL 225
+SY +Y+
Sbjct: 282 ISYAEYI 288
>sp|Q9VCF0|Y5902_DROME Uncharacterized protein CG5902 OS=Drosophila melanogaster GN=CG5902
PE=2 SV=1
Length = 243
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/199 (62%), Positives = 161/199 (80%), Gaps = 5/199 (2%)
Query: 26 LTNGHGPSSSVDKIAQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKIGKDQ 85
+NGHG + +A P+MC FCF+VL C L++++ P+ P SNDA+PLFVTWKIG+D+
Sbjct: 35 FSNGHG----MKTVAVPDMCLFCFEVLDCELNNVDGPSVPV-FSNDAYPLFVTWKIGRDK 89
Query: 86 RLRGCIGTFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
RLRGCIGTF+A+ LH GLREYA+TSAFKDSRF PI+ DE +L VSVSIL++FE+ +
Sbjct: 90 RLRGCIGTFSAMELHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHL 149
Query: 146 DWKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRC 205
DW++GVHGIRIEF ERG KRTATYLP+VA EQGWDQ+QTIDSLLRKGG++ ITP+ R
Sbjct: 150 DWQLGVHGIRIEFLTERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYRAAITPETRK 209
Query: 206 NIKLTRYQSELVSVSYQDY 224
+IKLTRY+S+ + + Y++Y
Sbjct: 210 SIKLTRYRSQEIQMHYKEY 228
>sp|Q9ZVJ2|AMERL_ARATH Uncharacterized protein At2g38710 OS=Arabidopsis thaliana
GN=At2g38710 PE=2 SV=1
Length = 214
Score = 187 bits (475), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 119/194 (61%), Gaps = 6/194 (3%)
Query: 40 AQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKI---GKDQRLRGCIGTFNA 96
A EM +CFD L H ++ E PP PLFVTWK G + RLRGCIGT A
Sbjct: 4 ANREMAVYCFDTLVSHYNNEE--TPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLEA 61
Query: 97 INLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGIRI 156
L G ++YA+TSA +D RF PI E L +VS+L +ED DY DW++G HGI I
Sbjct: 62 RRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWEVGKHGIII 121
Query: 157 EFHN-ERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQSE 215
EF E KR+ATYLPEV +GW +I+ IDSL+RK G+ G IT +R I LTRYQS
Sbjct: 122 EFTEPETNTKRSATYLPEVPAHEGWTKIEAIDSLVRKAGYNGVITEAVRRRINLTRYQST 181
Query: 216 LVSVSYQDYLNHWK 229
L S+ Y +YL++ K
Sbjct: 182 LFSMHYSEYLSYVK 195
>sp|Q22004|AMERL_CAEEL Uncharacterized protein R166.3 OS=Caenorhabditis elegans GN=R166.3
PE=4 SV=1
Length = 200
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
Query: 40 AQPEMCFFCFDVLYCHLHSLEPPNPPSGISNDAFPLFVTWKIGKDQRLRGCIGTFNAINL 99
A +M +CFDV+ L+ + P P I N PLFVTWK G LRGCIGTF+ + L
Sbjct: 4 ANIQMAVYCFDVINAQLNREKEPPVPKEIPNVKLPLFVTWKKGHQHDLRGCIGTFSDLRL 63
Query: 100 HGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGIRIEFH 159
GL EYA TSAF DSRF PI+ +E L VS+L +FE +++ DW IG HG+R+ F
Sbjct: 64 GEGLNEYAKTSAFHDSRFKPISREEVPSLQCGVSLLINFEPIHNFRDWTIGRHGVRMNFD 123
Query: 160 NERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQSELVSV 219
+ N R+A +LPEVA EQGW+ ++TID L+RK G+ G I +R +++ R+QS + +
Sbjct: 124 DGHRN-RSAVFLPEVAQEQGWNHVETIDHLIRKSGYGGHINDALRSALRIVRFQSSKLVL 182
Query: 220 SYQDYLNH 227
Y+DY+N+
Sbjct: 183 DYKDYVNY 190
>sp|Q9P6M2|YKQ3_SCHPO Uncharacterized protein C688.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC688.03c PE=4 SV=2
Length = 193
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 113/190 (59%), Gaps = 7/190 (3%)
Query: 41 QPEMCFFCFDVLYCHLHSLEPPNPPSGIS-NDAFPLFVTWKIGK--DQRLRGCIGTFNAI 97
+ E C++CF+V+ L + + + S + PLFV + GK D++LRGCIGTF A
Sbjct: 3 KKEYCYYCFEVVAATLEHRKVRDKWNAKSWTRSIPLFVKFASGKGHDKQLRGCIGTFRAR 62
Query: 98 NLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGIRIE 157
L L ++ +AF D RF PI++ E + L + +L FE +D DW++G+HG+ I+
Sbjct: 63 PLVTNLTYFSKQAAFCDERFRPISLGELALLECQIDLLVDFEPIDDPLDWEVGIHGVSIK 122
Query: 158 FHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQSELV 217
F G + ++TYLP VA EQ WDQ +T++SL+ K G+ G I I TRY+S +
Sbjct: 123 F-TANGIRYSSTYLPSVAAEQRWDQEETLESLIHKAGYYGSIRS---LQITATRYKSLEI 178
Query: 218 SVSYQDYLNH 227
+Y++YL++
Sbjct: 179 GCTYEEYLHN 188
>sp|Q9URS8|Y464_KLULA Uncharacterized protein KLLA0D02464g OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0D02464g PE=4 SV=1
Length = 227
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 85/133 (63%), Gaps = 12/133 (9%)
Query: 74 PLFVTWKIGK--DQRLRGCIGTFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVS 131
PLFVTWK K + +LRGCIGTF+ + GL+ YA+ SA +DSRF PI +E S+L
Sbjct: 50 PLFVTWKKLKKGEYQLRGCIGTFSEGKIEEGLKRYALISALQDSRFTPIEREELSQLRCG 109
Query: 132 VSILRHFE---------DGNDYTDWKIGVHGIRIEFHNERGNKR-TATYLPEVAPEQGWD 181
++L F+ + D +W+IG HGI I+F + + N R +AT+LPEV PEQGWD
Sbjct: 110 CNLLSQFKTIYSSEGTGNSGDIWNWEIGKHGIEIKFRHPKTNSRMSATFLPEVIPEQGWD 169
Query: 182 QIQTIDSLLRKGG 194
Q +T ++L+ K G
Sbjct: 170 QRETFENLIEKAG 182
>sp|Q12012|YO289_YEAST Uncharacterized protein YOR289W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YOR289W PE=1 SV=1
Length = 251
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 46/228 (20%)
Query: 44 MCFFCFDVLYCHLHSLEPPNPPSGIS----------------NDAFPLFVTWKIGKDQR- 86
F+ F LY HL+ P S +S N+ LF+TWK ++
Sbjct: 26 FAFYAFYQLYSHLN----PGKSSSLSLEDIRRRLYPDFKIDYNEKTSLFITWKKKSNKHH 81
Query: 87 ----------LRGCIGTFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILR 136
LRGCIGTF + + G+ +Y++ +A +D RF+PI E L S +IL
Sbjct: 82 TIDTNEENYILRGCIGTFAKMPIAHGIEKYSLIAALEDRRFSPIQKRELVDLKCSCNILG 141
Query: 137 HFED-----GN---DYTDWKIGVHGIRIEF-HNERGNKRTATYLPEVAPEQGWDQIQTID 187
+F+ GN D DW++G HGI + F H + G +AT+LP+V PEQ W++ T
Sbjct: 142 NFKTIFRGGGNPNGDIFDWELGKHGIELYFKHPKTGTTCSATFLPDVMPEQHWNKEDTFA 201
Query: 188 SLLRKGGFKGPITPDIRCN-----IKLTRYQSELVSVSYQDYLNHWKN 230
+L+ K G+ G I+ ++ N I++ RY+ + S++Y+++ K+
Sbjct: 202 NLIEKAGYWGNIS-EVMDNFETYFIEVIRYEGKKSSITYEEFNKQLKD 248
>sp|Q58220|Y810_METJA Protein MJ0810 OS=Methanocaldococcus jannaschii (strain ATCC 43067
/ DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0810
PE=3 SV=2
Length = 201
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 18/150 (12%)
Query: 76 FVTWKIGKDQRLRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSI 134
F T D+ LRGCIG I L L E A+++A KD RF P+T++E + V VSI
Sbjct: 45 FCTLHTYPDKELRGCIGIPEPIMPLIEALEEAAISAATKDPRFPPVTLEEMDSIVVEVSI 104
Query: 135 LRHFE-----DGNDYTD-WKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDS 188
L E +Y + KIG G+ IE+ RG LP+V E GWD + +
Sbjct: 105 LTPPELIKVNHPKEYLEKIKIGRDGLIIEYGFYRG-----LLLPQVPVEYGWDVEEYLAH 159
Query: 189 LLRKGGFKGPITPDIRC--NIKLTRYQSEL 216
L K G + PD+ +K+ R+++++
Sbjct: 160 LCLKAG----LPPDMWLAEGVKIYRFEAQI 185
>sp|Q8TY18|Y488_METKA Protein MK0488 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 /
JCM 9639 / NBRC 100938) GN=MK0488 PE=3 SV=1
Length = 207
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 63 NPPSGISNDAFPLFVTWKIGKDQRLRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPIT 121
PP+ + +FVT K D LRGCIG I L E A+++A D RF P+
Sbjct: 34 KPPTQRLAEKRGVFVTLKKYPDDELRGCIGFPEPIKPLVEATVEAAISAATGDPRFPPMR 93
Query: 122 -VDEFSKLHVSVSILR-----HFEDGNDYTD-WKIGVHGIRIEFHNERGNKRTATYLPEV 174
E ++ + VS+L ++ +Y + +IG HGI + R R+ LP+V
Sbjct: 94 DPSEMEEIKIEVSVLTPPKKLEVDNPKEYVEKIEIGRHGIIV-----RRGARSGLLLPQV 148
Query: 175 APEQGWDQIQTIDSLLRKGGFKGPITPDIRCN 206
E+GWD+I+ + K G + PD C+
Sbjct: 149 PVEEGWDEIEFLSHACLKAG----LPPDWWCS 176
>sp|Q4JAL7|Y792_SULAC Protein Saci_0792 OS=Sulfolobus acidocaldarius (strain ATCC 33909 /
DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=Saci_0792 PE=3 SV=1
Length = 227
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 17/136 (12%)
Query: 76 FVTWKIGKDQR--LRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSV 132
FVT + +D+R LRGCIG A+ L + + AV +AF D RF P++ E + + + V
Sbjct: 54 FVTIEKIEDERTSLRGCIGYVEAVAPLKEIVSKAAVAAAFSDPRFPPLSKSELNDILIEV 113
Query: 133 SILRHFEDGNDYTDWK------IGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTI 186
+IL E+ + WK +G G+ +E+ G + LP+VA E WD
Sbjct: 114 TILTKPEEISVKDRWKLPSFINVGEDGLIVEY----GIMYSGLLLPQVASEYCWDS---- 165
Query: 187 DSLLRKGGFKGPITPD 202
++ L + K + PD
Sbjct: 166 ETFLAETCIKAGLKPD 181
>sp|Q976G0|Y229_SULTO Protein STK_02290 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=STK_02290 PE=1 SV=1
Length = 230
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 55 HLHSLEPPNPPSGISNDAFPLFVTWKI--GKDQRLRGCIGTFNAIN-LHGGLREYAVTSA 111
+L SL P I N FVT + G LRGCIG A+ L + + A+ +A
Sbjct: 42 YLSSLNDP-----ILNKKGLAFVTLETYYGNSTSLRGCIGYVEAVAPLKEIVSKAAIAAA 96
Query: 112 FKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTDW------KIGVHGIRIEFHNERGNK 165
F D RF P++ EF + + V++L ++ + W K+G G+ +E+ G
Sbjct: 97 FSDPRFPPLSKGEFDNIIIEVTVLTKPQEIDVENRWELPKKIKVGEDGLIVEY----GIL 152
Query: 166 RTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCN--IKLTRYQ 213
+ LP+V E WD+ ++ L + K + PD N +K+ ++Q
Sbjct: 153 YSGLLLPQVPMEYCWDE----ETFLAETCIKAGLEPDCWLNNKVKIKKFQ 198
>sp|A8MBB6|Y360_CALMQ Protein Cmaq_0360 OS=Caldivirga maquilingensis (strain ATCC 700844
/ DSMZ 13496 / JCM 10307 / IC-167) GN=Cmaq_0360 PE=3
SV=1
Length = 219
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 61 PPNPPSGISNDAFPLFVTWKIGKDQ---RLRGCIGTFNA-INLHGGLREYAVTSAFKDSR 116
P + PS + D + +F T + ++ LRGCIG +N A+ +AF D R
Sbjct: 34 PEDTPSRLLEDNYGVFTTIETIREDGSTELRGCIGFPRGNVNTVKATINSALAAAFDDPR 93
Query: 117 FNPITVDEFSKLHVSVSILRHFEDG--NDYTDW----KIGVHGIRIEFHNERGNKRTATY 170
F P+ V+E + VS+L E+ N + K+GVHG+ I ERG +
Sbjct: 94 FAPLDVNELESVIFEVSVLSPLEEAKFNSPKELVNLVKVGVHGLVI----ERG-MYSGLL 148
Query: 171 LPEVAPEQGWDQIQTIDSLLRKGGFK 196
LP+V E WD + +D K +
Sbjct: 149 LPQVPVEYCWDTVMFLDEACEKAYLR 174
>sp|O26945|Y857_METTH Protein MTH_857 OS=Methanothermobacter thermautotrophicus (strain
ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta
H) GN=MTH_857 PE=3 SV=1
Length = 192
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 75 LFVTWKIGKDQRLRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVS 133
+FVT + K LRGCIG + L L E A+++A D RF P+ +E + V VS
Sbjct: 48 VFVT--LEKKGNLRGCIGYPEPVKPLIDALIEAAISAATGDPRFPPVKPEELDDIDVEVS 105
Query: 134 ILR-----HFEDGNDYTDW-KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTID 187
+L E DY ++GV G+ +E RG LP+VA E GWD + +
Sbjct: 106 VLTPPEPLEVESPADYPSLIRVGVDGLIVERGWARG-----LLLPQVATEWGWDAEEFLC 160
Query: 188 SLLRKGGF 195
+ K G
Sbjct: 161 NTCMKAGL 168
>sp|A6UTA8|Y138_META3 Protein Maeo_0138 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC
BAA-1280) GN=Maeo_0138 PE=3 SV=1
Length = 199
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 75 LFVTWKIGKDQRLRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVS 133
+F T + LRGCIG + L L+E +++++ D RF P+ E + + +S
Sbjct: 44 VFTTLYTYPKRNLRGCIGIPEPVMPLIDALKEASISASVDDPRFPPVGRMELRDITIEIS 103
Query: 134 ILR--HFEDGNDYTDW----KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTID 187
IL + N D+ K+G G+ IE+ RG LP+V E WD + +
Sbjct: 104 ILTPPKLVEANSPADYLEKIKVGRDGLIIEYGTYRG-----LLLPQVPIEHNWDIGEYLA 158
Query: 188 SLLRKGGFKGPITPDIRCNIKLTRYQSEL 216
+L K G P+ I+ + + ++S++
Sbjct: 159 NLCLKAGL--PVDTWIKKKVNIYSFESQI 185
>sp|Q46BJ4|Y1807_METBF Protein Mbar_A1807 OS=Methanosarcina barkeri (strain Fusaro / DSM
804) GN=Mbar_A1807 PE=3 SV=1
Length = 202
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 75 LFVTWKIGKDQRLRGCIG-TFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVS 133
+FVT + + LRGCIG F L + + A+++A +D RF P+ DE +K+ V V+
Sbjct: 47 VFVT--LTESGLLRGCIGHPFPDSRLEDAIMDSAISAATRDPRFPPVREDELNKIVVEVT 104
Query: 134 ILRHFEDGNDYTD-----WKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDS 188
IL E N + ++G HG+ ++ +G LP+VAPE D I+ +
Sbjct: 105 ILTQPEKINAPAEELPERIEVGKHGLIVKQGYCQG-----LLLPQVAPEYNMDSIEFLGH 159
Query: 189 LLRKGGF 195
K G
Sbjct: 160 TCLKAGL 166
>sp|C3NF81|Y855_SULIN Protein YN1551_0855 OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=YN1551_0855 PE=3 SV=1
Length = 227
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 87 LRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
LRGCIG A+ L + A +AF D RFNP+ DE S++ + V++L E+
Sbjct: 67 LRGCIGYVEAVAPLKQIVASAAKAAAFSDPRFNPLQKDELSEIIIEVTVLTKPEEIKVKD 126
Query: 146 DW------KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPI 199
W K+G G+ + E+G + LP+V E WD+ ++ L + K +
Sbjct: 127 RWDLPKIIKVGEDGLIV----EKGILHSGLLLPQVPMEYCWDE----ETFLAETCIKASL 178
Query: 200 TPD 202
PD
Sbjct: 179 EPD 181
>sp|C3MJ10|Y2104_SULIL Protein LS215_2104 OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=LS215_2104 PE=3 SV=1
Length = 227
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 87 LRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
LRGCIG A+ L + A +AF D RFNP+ DE S++ + V++L E+
Sbjct: 67 LRGCIGYVEAVAPLKQIVASAAKAAAFSDPRFNPLQKDELSEIIIEVTVLTKPEEIKVKD 126
Query: 146 DW------KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPI 199
W K+G G+ + E+G + LP+V E WD+ ++ L + K +
Sbjct: 127 RWDLPKIIKVGEDGLIV----EKGILHSGLLLPQVPMEYCWDE----ETFLAETCIKASL 178
Query: 200 TPD 202
PD
Sbjct: 179 EPD 181
>sp|C3N830|Y2063_SULIY Protein YG5714_2063 OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=YG5714_2063 PE=3 SV=1
Length = 227
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 87 LRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
LRGCIG A+ L + A +AF D RFNP+ DE S++ + V++L E+
Sbjct: 67 LRGCIGYVEAVAPLKQIVASAAKAAAFSDPRFNPLQKDELSEIIIEVTVLTKPEEIKVKD 126
Query: 146 DW------KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPI 199
W K+G G+ + E+G + LP+V E WD+ ++ L + K +
Sbjct: 127 RWDLPKIIKVGEDGLIV----EKGILHSGLLLPQVPMEYCWDE----ETFLAETCIKASL 178
Query: 200 TPD 202
PD
Sbjct: 179 EPD 181
>sp|C3MZQ7|Y2019_SULIA Protein M1627_2019 OS=Sulfolobus islandicus (strain M.16.27)
GN=M1627_2019 PE=3 SV=1
Length = 227
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 87 LRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
LRGCIG A+ L + A +AF D RFNP+ DE S++ + V++L E+
Sbjct: 67 LRGCIGYVEAVAPLKQIVASAAKAAAFSDPRFNPLQKDELSEIIIEVTVLTKPEEIKVKD 126
Query: 146 DW------KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPI 199
W K+G G+ + E+G + LP+V E WD+ ++ L + K +
Sbjct: 127 RWDLPKIIKVGEDGLIV----EKGILHSGLLLPQVPMEYCWDE----ETFLAETCIKASL 178
Query: 200 TPD 202
PD
Sbjct: 179 EPD 181
>sp|C4KIY8|Y1949_SULIK Protein M164_1949 OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=M164_1949 PE=3 SV=1
Length = 227
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 87 LRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
LRGCIG A+ L + A +AF D RFNP+ DE S++ + V++L E+
Sbjct: 67 LRGCIGYVEAVAPLKQIVASAAKAAAFSDPRFNPLQKDELSEIIIEVTVLTKPEEIKVKD 126
Query: 146 DW------KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPI 199
W K+G G+ + E+G + LP+V E WD+ ++ L + K +
Sbjct: 127 RWDLPKIIKVGEDGLIV----EKGILHSGLLLPQVPMEYCWDE----ETFLAETCIKASL 178
Query: 200 TPD 202
PD
Sbjct: 179 EPD 181
>sp|C3MYC8|Y1941_SULIM Protein M1425_1941 OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=M1425_1941 PE=3 SV=1
Length = 227
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 87 LRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
LRGCIG A+ L + A +AF D RFNP+ DE S++ + V++L E+
Sbjct: 67 LRGCIGYVEAVAPLKQIVASAAKAAAFSDPRFNPLQKDELSEIIIEVTVLTKPEEIKVKD 126
Query: 146 DW------KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPI 199
W K+G G+ + E+G + LP+V E WD+ ++ L + K +
Sbjct: 127 RWDLPKIIKVGEDGLIV----EKGILHSGLLLPQVPMEYCWDE----ETFLAETCIKASL 178
Query: 200 TPD 202
PD
Sbjct: 179 EPD 181
>sp|O67431|Y1444_AQUAE Protein aq_1444 OS=Aquifex aeolicus (strain VF5) GN=aq_1444 PE=3
SV=1
Length = 195
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 75 LFVTWKIGKDQRLRGCIGT-FNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVS 133
+F T K + LRGCIG L ++ +AF+D RF P+ +EF K+ ++
Sbjct: 39 VFTTLKTYPEHNLRGCIGVPLPVYPLWYATVYSSLQAAFQDPRFYPLKKEEFDKVLWEIT 98
Query: 134 ILRHFEDGNDYTD-----WKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDS 188
+L E+ + +IG HG+ IE ++G LP+V E GW ++ ++
Sbjct: 99 LLTPPEELKVPKEELPEQIEIGKHGLIIEKGEQKG-----LLLPQVPVEYGWSPVEFLEY 153
Query: 189 LLRKGGF 195
K G
Sbjct: 154 TCLKAGL 160
>sp|Q980T4|Y193_SULSO Protein SSO0193 OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM
1617 / JCM 11322 / P2) GN=SSO0193 PE=3 SV=1
Length = 227
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 87 LRGCIGTFNAIN-LHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
LRGCIG A+ L A +AF D RFNP+ DE + + + V++L E+
Sbjct: 67 LRGCIGYVEAVAPLKQIAASAAKAAAFSDPRFNPLQEDELANIIIEVTVLTKPEEIKVKD 126
Query: 146 DW------KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPI 199
W K+G G+ + E+G + LP+V E WD+ ++ L + K +
Sbjct: 127 RWDLPKIIKVGEDGLIV----EKGILHSGLLLPQVPMEYCWDE----ETFLAETCIKASL 178
Query: 200 TPD--IRCNIKLTRY 212
PD + ++++ R+
Sbjct: 179 EPDCWLDSSVRIKRF 193
>sp|Q12WB4|Y1344_METBU Protein Mbur_1344 OS=Methanococcoides burtonii (strain DSM 6242)
GN=Mbur_1344 PE=3 SV=1
Length = 200
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 75 LFVTWKIGKDQRLRGCIG-TFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVS 133
+FVT + K+ LRGCIG + L + + A+++A +D RF + + E S + V V+
Sbjct: 43 VFVT--LTKNGNLRGCIGHPYADSVLESAIVDSAISAATRDPRFPMVDISEMSDIIVEVT 100
Query: 134 ILRHFEDGNDYTD-----WKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDS 188
+L E + D +IG HG+ + +G LP+VAPE +D I ++
Sbjct: 101 VLTQPELVDVLPDKLPEVIEIGRHGLIAKMGMYQG-----LLLPQVAPENDFDAIDLLNH 155
Query: 189 LLRKGGF 195
K G
Sbjct: 156 TCLKAGL 162
>sp|Q9X1N7|Y1551_THEMA Protein TM_1551 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 /
DSM 3109 / JCM 10099) GN=TM_1551 PE=3 SV=1
Length = 174
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 84 DQRLRGCIGTF--NAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDG 141
D LRGCIGT+ NL +R+ A+ +A +D RF P++ DE + V V IL E
Sbjct: 50 DGSLRGCIGTYLPTKPNLALEIRDNAIAAATQDPRFPPVSPDELDDIVVHVDILSPPEPV 109
Query: 142 NDYTDWKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITP 201
D ++ +G+ + RG LP++ + + T++ LR K I P
Sbjct: 110 RDISELDPKKYGVIVVKGWRRG-----LLLPDI------EGVDTVEEQLRIAKLKAGI-P 157
Query: 202 DIRCNIKLTRYQSE 215
+ ++++ R+ E
Sbjct: 158 EWDDDVEIYRFTVE 171
>sp|Q8TK33|Y3591_METAC Protein MA_3591 OS=Methanosarcina acetivorans (strain ATCC 35395 /
DSM 2834 / JCM 12185 / C2A) GN=MA_3591 PE=3 SV=1
Length = 199
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 13/127 (10%)
Query: 75 LFVTWKIGKDQRLRGCIG-TFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVS 133
+FVT + + LRGCIG + L + + A+++A +D RF P+ +E L V V+
Sbjct: 47 VFVT--LTEKGMLRGCIGHPYPDSTLEQAIIDSAISAAVRDPRFPPVGGEELESLIVEVT 104
Query: 134 ILRHFEDGN----DYTD-WKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDS 188
IL E N + D +IG HG+ ++ +G LP+VAPE D I +
Sbjct: 105 ILTQPEKINAPPKELPDKVEIGKHGLIVKQGYCQG-----LLLPQVAPENEMDSIDFLGH 159
Query: 189 LLRKGGF 195
K G
Sbjct: 160 TCMKAGL 166
>sp|Q5JFK7|Y174_PYRKO Protein TK0174 OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 /
JCM 12380 / KOD1) GN=TK0174 PE=3 SV=1
Length = 205
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 22/179 (12%)
Query: 55 HLHSLEPPNPPSGISNDAFPLFVTWK---IGKDQRLRGCIG-TFNAINLHGGLREYAVTS 110
H +EPP + +FVT + LRGCIG L + A+ +
Sbjct: 26 HKRVIEPPEDTPTELWEKMGVFVTLNRHNVPPQMALRGCIGFPLPIYPLVEATIKAAIYA 85
Query: 111 AFKDSRFNPITVDEFSKLHVSVSILRHFE------DGNDYTDWKIGVHGIRIEFHNERGN 164
A D RF P+ +E +L V VS+L E +G K+G G+ IE
Sbjct: 86 AVDDPRFPPVQPEELDELTVEVSVLTPPELVEGPPEGRP-KKIKVGRDGLLIE-----KG 139
Query: 165 KRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPD--IRCNIKLTRYQSELVSVSY 221
+ LP+V E GWD+ + L + +K + PD + + K+ R+ +E+ Y
Sbjct: 140 IYSGLLLPQVPVEWGWDE----EEFLAQTCWKAGLPPDCWLDPDTKVYRFTAEIFEEEY 194
>sp|Q8PZK8|Y484_METMA Protein MM_0484 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM
3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_0484 PE=1
SV=1
Length = 199
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 75 LFVTWKIGKDQRLRGCIG-TFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVS 133
+FVT G LRGCIG + L + + A+++A +D RF + DE + V V+
Sbjct: 47 VFVTLTEGG--LLRGCIGHPYPDSTLKEAILDSAISAATRDPRFPTVEQDEMKNILVEVT 104
Query: 134 ILRHFEDGN----DYTD-WKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDS 188
IL E N + D +IG HG+ ++ +G LP+VAPE D I +
Sbjct: 105 ILTQPEKINASPKELPDKVEIGKHGLIVKQGYCQG-----LLLPQVAPENDMDSIDFLSH 159
Query: 189 LLRKGGF 195
K G
Sbjct: 160 TCMKAGL 166
>sp|A3DP40|Y1309_STAMF Protein Smar_1309 OS=Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1) GN=Smar_1309 PE=3 SV=1
Length = 226
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 87 LRGCIGTFNAI-NLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYT 145
LRGCIG I +L + A+ +AF D RF P+ +E + V++L E+
Sbjct: 69 LRGCIGFLAPIYSLVESTIKSALEAAFNDPRFPPLRPEELDNIIFEVTVLSEPEEIIVRN 128
Query: 146 DW------KIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPI 199
W KIG HG+ +E +G T LP V E WD+ ++ L + K +
Sbjct: 129 RWDLPNMIKIGKHGLVVEKGWFKG-----TLLPVVPIEYCWDE----ETFLSETCIKAGL 179
Query: 200 TPD 202
PD
Sbjct: 180 QPD 182
>sp|Q8TZL1|Y1979_PYRFU Protein PF1979 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638
/ JCM 8422 / Vc1) GN=PF1979 PE=3 SV=1
Length = 210
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 87 LRGCIG-TFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFE-----D 140
LRGCIG L + A+ +A D RF P+ ++E + + V VS+L E
Sbjct: 61 LRGCIGFPLPIYPLVKATIKAAIYAAVDDPRFPPVKLEEMNNIVVEVSVLTPPELIEGPP 120
Query: 141 GNDYTDWKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPIT 200
K+G G+ +E T LP+VA E GWD+ + L + +K +
Sbjct: 121 EERPKKIKVGRDGLIVE-----KGIYTGLLLPQVAVEWGWDE----EEFLAETCWKAGLP 171
Query: 201 PD--IRCNIKLTRYQSELVSVSY 221
PD + + K+ ++ +E+ Y
Sbjct: 172 PDCWLDEDTKVYKFTAEIFEEEY 194
>sp|Q9YD56|Y1056_AERPE Protein APE_1056.1 OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=APE_1056.1 PE=3
SV=2
Length = 231
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 76 FVTW--KIGKDQRLRGCIGTFNAI-NLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSV 132
FVT + G LRGCIG + L + AV +A D RF P++ +E ++ V V
Sbjct: 61 FVTLERRSGDGWELRGCIGVVRPVLPLVEAVVTAAVDAASSDPRFEPLSREELDRVRVEV 120
Query: 133 SILRHFEDGNDYTDWK-----IGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTID 187
++L E + +G+HG+ +E G LP+VA ++GWD I +
Sbjct: 121 TVLGSMEPLPKKPHERPALVEVGLHGLYVEKPPYAG-----LLLPQVAVDEGWDPILFLT 175
Query: 188 SLLRKGGFKGPITPDIRCNIKLTRYQS 214
K G G T +R ++++ R+++
Sbjct: 176 WACIKAGLPG--TCWLREDVEIYRFRA 200
>sp|A1RT97|Y1005_PYRIL Protein Pisl_1005 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM
9189) GN=Pisl_1005 PE=3 SV=1
Length = 221
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 61 PPNPPSGISNDAFPLFVTWKI--GKDQRLRGCIGTFNAI--NLHGGLREYAVTSAFKDSR 116
P +PP + D + +F T + G LRGCIG L+ + A+ + +D R
Sbjct: 33 PESPPQRLLIDNYGVFTTIETVSGDRYELRGCIGYPEGYKNTLYATIYS-AIGACCQDPR 91
Query: 117 FNPITVDEFSKLHVSVSILRHF----EDGNDYTDW-KIGVHGIRIEFHNERGNKRTATYL 171
F + +DE + VSIL +D Y + ++G HG+ + R L
Sbjct: 92 FPALRIDELPHVIFEVSILSPLTLLQDDPRKYPELIQVGRHGLVV-----RRGPYAGLLL 146
Query: 172 PEVAPEQGWDQIQTIDSLLRKGGFKGPITPDIRCNIKLTRYQSEL 216
P+VA E+ WD + + + K G D R KL Y++++
Sbjct: 147 PQVAVEECWDAEEFLLHVCMKAWLPGDCWLDRRT--KLYIYEAQI 189
>sp|O57770|Y010_PYRHO Protein PH0010 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0010 PE=1
SV=1
Length = 206
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 20/176 (11%)
Query: 57 HSLEPPNPPSGISNDAFPLFVT---WKIGKDQRLRGCIGTFNAI-NLHGGLREYAVTSAF 112
+EPP + +FVT + + LRGCIG I L + A+ SA
Sbjct: 29 KEIEPPKDTPPELWEKMGVFVTLNRYNVPPQTALRGCIGFPTPIYPLVEATIKAAIYSAV 88
Query: 113 KDSRFNPITVDEFSKLHVSVSILRHFE-----DGNDYTDWKIGVHGIRIEFHNERGNKRT 167
D RF P+ ++E L V VS+L E K+G G+ +E +
Sbjct: 89 DDPRFPPVKLEEMDNLVVEVSVLTPPELIEGPPEERPRKIKVGRDGLIVE-----KGIYS 143
Query: 168 ATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPD--IRCNIKLTRYQSELVSVSY 221
LP+V E GWD+ + L + +K + PD + + K+ ++ +E+ Y
Sbjct: 144 GLLLPQVPVEWGWDE----EEFLAETCWKAGLPPDCWLDEDTKVYKFTAEIFEEEY 195
>sp|Q9V2R5|Y010_PYRAB Protein PYRAB00100 OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=PYRAB00100 PE=3 SV=1
Length = 205
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 87 LRGCIG-TFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFE-----D 140
LRGCIG L + A+ SA D RF P+ ++E + V VS+L E
Sbjct: 61 LRGCIGFPLPIYPLVKATIKAAIYSAVDDPRFPPVKLEEMDNIIVEVSVLTPPELIEGPP 120
Query: 141 GNDYTDWKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPIT 200
K+G G+ +E + LP+V E GWD+ + L + +K +
Sbjct: 121 EERPKKIKVGRDGLIVE-----KGIYSGLLLPQVPIEWGWDE----EEFLAETCWKAGLP 171
Query: 201 PD--IRCNIKLTRYQSELVSVSY 221
PD + + K+ R+ +E+ Y
Sbjct: 172 PDCWLDEDTKVYRFTAEIFEEEY 194
>sp|C5A6U0|Y1450_THEGJ Protein TGAM_1450 OS=Thermococcus gammatolerans (strain DSM 15229 /
JCM 11827 / EJ3) GN=TGAM_1450 PE=3 SV=1
Length = 205
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 24/176 (13%)
Query: 59 LEPPNPPSGISNDAFPLFVT---WKIGKDQRLRGCIG-TFNAINLHGGLREYAVTSAFKD 114
+EPP + +FVT ++ LRGCIG L + A+ +A +D
Sbjct: 30 IEPPEDTPPELWEKMGVFVTLNRYRAPPQMALRGCIGFPLPIYPLVEATIKAAIHAAVED 89
Query: 115 SRFNPITVDEFSKLHVSVSIL-----RHFEDGNDYTDWKIGVHGIRIE--FHNERGNKRT 167
RF P+ +E +L V VS+L K+G G+ +E F+ +
Sbjct: 90 PRFPPVRPEELDELTVEVSVLTPPEPIEGPPEERPRKIKVGRDGLIVEKGFY-------S 142
Query: 168 ATYLPEVAPEQGWDQIQTIDSLLRKGGFKGPITPD--IRCNIKLTRYQSELVSVSY 221
LP+V E GWD+ + L + +K + PD + + K+ R+ +E+ Y
Sbjct: 143 GLLLPQVPVEWGWDE----EEFLAQTCWKAGLPPDCWLDPDTKVYRFTAEIFEEEY 194
>sp|A4WGW1|Y011_PYRAR Protein Pars_0011 OS=Pyrobaculum arsenaticum (strain DSM 13514 /
JCM 11321) GN=Pars_0011 PE=3 SV=1
Length = 213
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 61 PPNPPSGISNDAFPLFVTWKI--GKDQRLRGCIGTFNAI--NLHGGLREYAVTSAFKDSR 116
P NPP + ND + +F T + G+ LRGCIG L+ + A+ + +D R
Sbjct: 33 PENPPPRLINDNYGVFTTIETVQGEKFELRGCIGYPEGYKNTLYATIYS-AIGACCQDPR 91
Query: 117 FNPITVDEFSKLHVSVSILRHF----EDGNDYTDW-KIGVHGIRIEFHNERGNKRTATYL 171
F + +E + + VSIL +D Y + ++G HG+ + +RG + L
Sbjct: 92 FPAMRREELNSVVFEVSILSPLTLLDDDPRKYLELVQVGRHGLVV----KRG-PYSGLLL 146
Query: 172 PEVAPEQGW 180
P+VA E+ W
Sbjct: 147 PQVAVEECW 155
>sp|Q8R8N9|Y1956_THETN Protein TTE1956 OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=TTE1956 PE=3
SV=1
Length = 458
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 18/143 (12%)
Query: 62 PNP-PSGISNDAFP----LFVTWKIGKDQRLRGCIGTF--NAINLHGGLREYAVTSAFKD 114
P P P G+ + + +FVT + K LRGCIGT N+ + A+++ F+D
Sbjct: 306 PMPVPEGLPEEMYRRKAGVFVT--LHKKGELRGCIGTVVPQKKNVAEEIIRNAISAGFED 363
Query: 115 SRFNPITVDEFSKLHVSVSILRHFEDGNDYTDWKIGVHGIRIEFHNERGNKRTATYLPEV 174
RF P+ +E ++ SV +L + + +G+ + R R LP++
Sbjct: 364 PRFPPVREEELPEIEYSVDVLMPTQPVKSKDELDPKRYGVIV-----RKGFRAGLLLPDI 418
Query: 175 APEQGWDQIQTIDSL-LRKGGFK 196
+G D ++ S+ LRK G +
Sbjct: 419 ---EGVDTVEEQLSIALRKAGIR 438
>sp|Q9HLJ2|Y236_THEAC Protein Ta0236 OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=Ta0236 PE=3
SV=1
Length = 206
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 10/147 (6%)
Query: 55 HLHSLEPPNPPSG-ISNDAFPLFVTWKIGKDQRLRGCIGTFNAI-NLHGGLREYAVTSAF 112
+L + + P+PP+ I + +F T LRGCIG L G+ ++ +A
Sbjct: 32 YLRNEKLPDPPADPIFQEKHGVFTTINTYPGNTLRGCIGFPEPYYPLGEGIIRSSIYAAT 91
Query: 113 KDSRFNPITVDEFSKLHVSVSILRH-FEDGNDYTDWKIGVHGIR---IEFHNERGNKRTA 168
+D RF P+ +DE S + VSIL E + D VH R I + N +
Sbjct: 92 EDPRFEPMKIDEISHVTFEVSILTQPVEITVNPEDRPKAVHIGRDGLIAVY----NGASG 147
Query: 169 TYLPEVAPEQGWDQIQTIDSLLRKGGF 195
LP+VA E + + +++L K G
Sbjct: 148 LLLPQVATEYRMNPEEFLEALCEKAGL 174
>sp|B6YW91|Y1965_THEON Protein TON_1965 OS=Thermococcus onnurineus (strain NA1)
GN=TON_1965 PE=3 SV=1
Length = 205
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 63 NPPSGISNDAFP---LFVTWK---IGKDQRLRGCIG-TFNAINLHGGLREYAVTSAFKDS 115
PP G + + +FVT + LRGCIG L + A+ +A D
Sbjct: 31 EPPEGTPPELWEKMGVFVTLNRHNVPPQMSLRGCIGFPLPIYPLVEATIKAAIYAAVDDP 90
Query: 116 RFNPITVDEFSKLHVSVSILRHFE-----DGNDYTDWKIGVHGIRIEFHNERGNKRTATY 170
RF P+ E + + VS+L E K+G G+ IE +
Sbjct: 91 RFPPVKESELDDIVIEVSVLTPPELIEGPPEERPRKIKVGRDGLIIE-----KGIHSGLL 145
Query: 171 LPEVAPEQGWDQIQTIDSLLRKGGFKGPITPD--IRCNIKLTRYQSELVSVSY 221
LP+V E GWD+ + L + +K + PD + + K+ R+ +E+ Y
Sbjct: 146 LPQVPIEWGWDE----EEFLAQTCWKAGLPPDCWLDEDTKVYRFTAEIFEEEY 194
>sp|Q978N1|Y1384_THEVO Protein TV1384 OS=Thermoplasma volcanium (strain ATCC 51530 / DSM
4299 / JCM 9571 / NBRC 15438 / GSS1) GN=TV1384 PE=3 SV=1
Length = 201
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 61 PPNPPSGISNDAFPLFVTWKIGKDQRLRGCIGTFNAI-NLHGGLREYAVTSAFKDSRFNP 119
P P I ++ +F T D +LRGCIG L G+ + ++ +A D RF+P
Sbjct: 34 PEVPDDPIFHEKHGVFTTINTYPDNQLRGCIGFPEPYYELGEGIIKSSIYAATDDPRFDP 93
Query: 120 ITVDEFSKLHVSVSILRHFEDGNDYTDWK-----IGVHGIRIEFHNERGNKRTATYLPEV 174
+ DE +++ +SIL ++ + + +G GI ++ G LP+V
Sbjct: 94 MEPDELNRVTFELSILTVPQEVTVNPEERPKAITVGKDGIIAVYNGASG-----LLLPQV 148
Query: 175 APEQGWDQIQTIDSLLRKGGF 195
A E + +++L K G
Sbjct: 149 ATEYRMSAEEFLEALCEKAGL 169
>sp|Q74M72|Y441_NANEQ Protein NEQ441 OS=Nanoarchaeum equitans (strain Kin4-M) GN=NEQ441
PE=3 SV=1
Length = 180
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 84 DQRLRGCIGT-FNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFED-- 140
D +LRGC+G + L L+ A+ +AF+D RF P+ +E + V++L
Sbjct: 44 DNQLRGCMGIPYPIYPLWQSLKYSALMAAFEDPRFPPLQKEELDNVKFEVTVLTPPRKLI 103
Query: 141 GNDYTDWKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGF 195
N+ ++ + + +RG + LP+V E+GWD + + K G
Sbjct: 104 VNNPLEYLEKIKIGKHGIIIKRG-PYSGLLLPQVPIEEGWDAKEFLSYGCLKAGL 157
>sp|Q0W787|Y2425_UNCMA Protein UNCMA_24250 OS=Uncultured methanogenic archaeon RC-I
GN=UNCMA_24250 PE=3 SV=1
Length = 198
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 75 LFVTWKIGKDQRLRGCIG---TFNAINLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVS 131
+FVT I D LRGCIG ++L L + A+++A +D RF + +E ++ V
Sbjct: 42 VFVTLSINHD--LRGCIGYPYPMEDMSLGEALADAAMSAATRDPRFPRVHKNELDQIRVE 99
Query: 132 VSILRHFE-----DGNDYTDWKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTI 186
V+IL E KIG G+ IE+ +G LP+V E WD + +
Sbjct: 100 VTILGQPELLKCKPLERPHHIKIGRDGLIIEYGLHKG-----LLLPQVPVEWHWDATEFL 154
Query: 187 DSLLRKGGFKGPITPDIRCNIKLTRY 212
++L K G I+PD K Y
Sbjct: 155 ENLCLKAG----ISPDAWVEEKAKIY 176
>sp|A1RY70|Y748_THEPD Protein Tpen_0748 OS=Thermofilum pendens (strain Hrk 5)
GN=Tpen_0748 PE=3 SV=1
Length = 213
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 89 GCIGTFNAI-NLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSILRHFEDGNDYTD- 146
GCIG + L A+ +A +D RF P+T E + VS+L E DY
Sbjct: 68 GCIGYPEPVLPLAEATIHAAIAAATEDPRFPPMTPRELDTVVFEVSVLTKPEP-VDYRSP 126
Query: 147 ------WKIGVHGIRIEFHNERGNKRTATYLPEVAPEQGWDQIQTIDSLLRKGGFK 196
K+G G+ +E+ RG LP+VA ++GWD + + K G +
Sbjct: 127 EELPDKIKVGRDGLIVEYGAARG-----LLLPQVAVDEGWDPEEFLSYACLKAGLR 177
>sp|A3PFD3|MUTS_PROM0 DNA mismatch repair protein MutS OS=Prochlorococcus marinus (strain
MIT 9301) GN=mutS PE=3 SV=1
Length = 913
Score = 32.3 bits (72), Expect = 3.2, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 97 INLHGGLREYAVTSAFKDSRFNPITVDEFSKLHVSVSI----LRHFEDGNDYTDW----- 147
IN+ GL E A T +FK P+++ E +H V LR+ D DY++W
Sbjct: 493 INIDEGLLELADTISFKLVENPPLSISEGGMIHDGVDNILDGLRNLMD--DYSEWLNKEE 550
Query: 148 ----KIG-VHGIRIEFHNERG-----NKRTATYLPEVAPEQGWDQIQTI 186
KI + ++I+FH G NK P Q W + QT+
Sbjct: 551 LKERKISKISNLKIQFHKNFGYYISINKSKVNLAP-----QHWIKRQTL 594
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,074,196
Number of Sequences: 539616
Number of extensions: 4347871
Number of successful extensions: 7383
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 7304
Number of HSP's gapped (non-prelim): 59
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)