Query psy1886
Match_columns 170
No_of_seqs 148 out of 1826
Neff 9.0
Searched_HMMs 46136
Date Fri Aug 16 18:46:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1886.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1886hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158|consensus 100.0 7.9E-45 1.7E-49 298.8 15.5 167 1-170 331-498 (499)
2 KOG0156|consensus 100.0 3.3E-41 7.3E-46 279.1 14.9 163 1-170 323-487 (489)
3 PLN02971 tryptophan N-hydroxyl 100.0 9.5E-41 2.1E-45 281.0 15.9 166 1-170 364-533 (543)
4 PLN02183 ferulate 5-hydroxylas 100.0 1E-40 2.2E-45 279.3 15.6 168 1-170 341-511 (516)
5 PLN03234 cytochrome P450 83B1; 100.0 1.1E-40 2.3E-45 277.9 15.6 168 1-170 325-498 (499)
6 PLN02394 trans-cinnamate 4-mon 100.0 1.4E-40 3E-45 277.5 16.1 167 1-170 330-501 (503)
7 PF00067 p450: Cytochrome P450 100.0 4.9E-41 1.1E-45 272.8 12.4 163 1-167 299-463 (463)
8 KOG0157|consensus 100.0 1.3E-40 2.8E-45 277.5 15.2 165 1-170 328-495 (497)
9 PTZ00404 cytochrome P450; Prov 100.0 1.5E-40 3.3E-45 276.0 14.9 161 1-170 320-482 (482)
10 PLN02738 carotene beta-ring hy 100.0 3.5E-40 7.5E-45 281.2 16.2 164 1-170 428-594 (633)
11 PLN02169 fatty acid (omega-1)- 100.0 2.3E-40 5E-45 276.3 14.7 158 1-170 338-499 (500)
12 PLN00110 flavonoid 3',5'-hydro 100.0 3.7E-40 8E-45 275.3 15.5 166 1-170 326-496 (504)
13 PLN00168 Cytochrome P450; Prov 100.0 4.3E-40 9.3E-45 275.7 15.9 167 1-170 343-516 (519)
14 PLN02500 cytochrome P450 90B1 100.0 4.4E-40 9.5E-45 273.9 15.5 163 1-169 316-488 (490)
15 PLN02426 cytochrome P450, fami 100.0 4.4E-40 9.5E-45 274.7 15.4 167 1-170 330-499 (502)
16 PLN02655 ent-kaurene oxidase 100.0 6.8E-40 1.5E-44 271.3 15.8 164 1-170 299-463 (466)
17 PLN02290 cytokinin trans-hydro 100.0 5.9E-40 1.3E-44 274.5 14.9 161 1-170 353-514 (516)
18 KOG0159|consensus 100.0 3.4E-40 7.4E-45 268.2 12.9 165 1-170 353-517 (519)
19 PLN03195 fatty acid omega-hydr 100.0 9.9E-40 2.2E-44 273.2 14.2 166 1-170 329-515 (516)
20 PLN02687 flavonoid 3'-monooxyg 100.0 2.6E-39 5.6E-44 270.9 16.1 168 1-170 334-508 (517)
21 PLN02774 brassinosteroid-6-oxi 100.0 2E-39 4.4E-44 268.3 15.0 161 1-169 301-462 (463)
22 PLN03018 homomethionine N-hydr 100.0 6.4E-39 1.4E-43 269.4 17.0 166 1-170 351-523 (534)
23 PLN02966 cytochrome P450 83A1 100.0 4.4E-39 9.6E-44 268.6 15.8 141 1-141 326-469 (502)
24 PLN03112 cytochrome P450 famil 100.0 6.3E-39 1.4E-43 268.2 15.5 168 1-170 333-507 (514)
25 PLN03141 3-epi-6-deoxocathaste 100.0 7.1E-39 1.5E-43 264.3 15.4 160 1-170 288-449 (452)
26 PLN02987 Cytochrome P450, fami 100.0 1E-37 2.2E-42 258.8 16.3 164 1-170 304-468 (472)
27 PLN02196 abscisic acid 8'-hydr 100.0 5.9E-38 1.3E-42 259.6 14.5 160 1-169 301-461 (463)
28 PLN02302 ent-kaurenoic acid ox 100.0 8.2E-38 1.8E-42 259.7 15.3 162 1-170 324-487 (490)
29 PLN02936 epsilon-ring hydroxyl 100.0 9E-38 1.9E-42 260.1 15.5 163 1-170 315-481 (489)
30 KOG0684|consensus 100.0 5.8E-38 1.3E-42 250.8 12.4 166 1-170 310-484 (486)
31 PLN02648 allene oxide synthase 100.0 2.4E-33 5.2E-38 232.7 14.3 136 1-139 310-459 (480)
32 COG2124 CypX Cytochrome P450 [ 100.0 3.5E-30 7.6E-35 210.5 10.9 130 26-169 280-409 (411)
33 PF12508 DUF3714: Protein of u 67.8 2 4.3E-05 32.1 0.3 43 25-68 52-94 (200)
34 PF08492 SRP72: SRP72 RNA-bind 63.1 5.8 0.00012 23.5 1.6 7 87-93 44-50 (59)
35 PF09201 SRX: SRX; InterPro: 59.0 7.9 0.00017 27.1 1.9 22 113-134 19-40 (148)
36 TIGR03779 Bac_Flav_CT_M Bacter 47.3 5.2 0.00011 33.2 -0.5 43 26-69 256-298 (410)
37 KOG3506|consensus 34.3 19 0.00042 20.9 0.7 11 105-115 12-22 (56)
38 PF07886 BA14K: BA14K-like pro 30.2 49 0.0011 16.8 1.7 16 100-115 16-31 (31)
39 PF12444 Sox_N: Sox developmen 26.4 49 0.0011 21.1 1.6 18 122-139 60-77 (84)
40 PF02663 FmdE: FmdE, Molybdenu 26.3 71 0.0015 21.8 2.6 22 112-133 5-26 (131)
41 PRK06789 flagellar motor switc 23.6 1.4E+02 0.003 18.5 3.2 39 31-69 21-62 (74)
42 PF15300 INT_SG_DDX_CT_C: INTS 21.6 49 0.0011 20.0 0.9 14 26-39 41-54 (65)
No 1
>KOG0158|consensus
Probab=100.00 E-value=7.9e-45 Score=298.78 Aligned_cols=167 Identities=37% Similarity=0.739 Sum_probs=148.3
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeec-CEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLC-GYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|||||+++..+. ..++++.+++|+||++||+||||+||+++.+.|.+++|+++. ++.|++|+.|.++.+++|+||++
T Consensus 331 LreEI~~~~~~~--~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~ 408 (499)
T KOG0158|consen 331 LREEIDEVLEEK--EGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEY 408 (499)
T ss_pred HHHHHHHHhccc--CCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCccc
Confidence 689999997764 339999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeeec
Q psy1886 80 WPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKT 159 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p 159 (170)
||+|++|+||||.+++.+...+..|+|||.|||+|+|++||++|+|++|+.||++|+++.+. ...........++++.|
T Consensus 409 ~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~~~~~~~~~~l~p 487 (499)
T KOG0158|consen 409 WPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIPLEGDPKGFTLSP 487 (499)
T ss_pred CCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCcccCCccceeeec
Confidence 99999999999998877777889999999999999999999999999999999999996544 11122111123678899
Q ss_pred CCCceeEEeeC
Q psy1886 160 LPGNDIKLEPR 170 (170)
Q Consensus 160 ~~~~~v~~~~R 170 (170)
+.++++++++|
T Consensus 488 k~gi~Lkl~~r 498 (499)
T KOG0158|consen 488 KGGIWLKLEPR 498 (499)
T ss_pred CCceEEEEEeC
Confidence 99999999987
No 2
>KOG0156|consensus
Probab=100.00 E-value=3.3e-41 Score=279.05 Aligned_cols=163 Identities=33% Similarity=0.608 Sum_probs=140.2
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccc-eeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIV-ARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
+++||++++|.+ ..++.+++.+||||+|+|+|++|+||++|.. +|.+.+|+.++||.||+||.|+++.|++|+||++
T Consensus 323 ~qeEId~vvG~~--r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~v 400 (489)
T KOG0156|consen 323 LQEEIDEVVGKG--RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKV 400 (489)
T ss_pred HHHHHHHHhCCC--CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCcc
Confidence 589999999986 5599999999999999999999999999974 8999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeee
Q psy1886 80 WPNPEQFNPDRFLPSE-SSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLK 158 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~-~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 158 (170)
|+||++|+||||++++ ... ....++|||.|+|.|||..+|.+++.+++|.++++|+|+.... ..++... +.++.
T Consensus 401 w~dP~eF~PERFl~~~d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~---~~d~~e~-~~~~~ 475 (489)
T KOG0156|consen 401 WEDPEEFKPERFLDSNDGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG---KVDMEEA-GLTLK 475 (489)
T ss_pred CCCccccChhhhcCCccccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC---CCCCccc-cccee
Confidence 9999999999999874 444 6788999999999999999999999999999999999964332 2233323 24455
Q ss_pred cCCCceeEEeeC
Q psy1886 159 TLPGNDIKLEPR 170 (170)
Q Consensus 159 p~~~~~v~~~~R 170 (170)
.+.++.+...+|
T Consensus 476 ~~~pl~~~~~~r 487 (489)
T KOG0156|consen 476 KKKPLKAVPVPR 487 (489)
T ss_pred cCCcceeeeecC
Confidence 555666665544
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=9.5e-41 Score=281.04 Aligned_cols=166 Identities=23% Similarity=0.419 Sum_probs=140.9
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCcc-ceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPI-VARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~-~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
+++||+++++.+ ..++++++++|||++|||+|+||++|+++. +.|.+.+|+.++||.||||+.|+++.|++|+|+++
T Consensus 364 l~~EI~~v~g~~--~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~ 441 (543)
T PLN02971 364 AMEEIDRVVGKE--RFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKV 441 (543)
T ss_pred HHHHHHHHhCCC--CCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhh
Confidence 589999999864 678999999999999999999999999987 58999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC---CCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeeccee
Q psy1886 80 WPNPEQFNPDRFLPSESS---KRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLT 156 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~---~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~ 156 (170)
|+||++|+||||++++.. ...++.|+|||.|+|.|+|++||.+|+++++|.|+++|+|++.+.. ...+.....+ +
T Consensus 442 ~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~-~ 519 (543)
T PLN02971 442 WSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE-TRVELMESSH-D 519 (543)
T ss_pred CCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC-CCcchhhhcC-c
Confidence 999999999999975432 1345689999999999999999999999999999999999754322 1233333344 5
Q ss_pred eecCCCceeEEeeC
Q psy1886 157 LKTLPGNDIKLEPR 170 (170)
Q Consensus 157 ~~p~~~~~v~~~~R 170 (170)
+..++++.+.+++|
T Consensus 520 ~~~~~~~~~~~~~~ 533 (543)
T PLN02971 520 MFLSKPLVMVGELR 533 (543)
T ss_pred ccccccceeeeeec
Confidence 53444888888887
No 4
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1e-40 Score=279.30 Aligned_cols=168 Identities=26% Similarity=0.496 Sum_probs=139.3
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHW 80 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~ 80 (170)
|++||+++++.+ ..++++++++|||++|||+|+||++|+++...|++.+|++++|+.||||+.|.++.+++|+|+++|
T Consensus 341 l~~Ei~~v~~~~--~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~ 418 (516)
T PLN02183 341 VQQELADVVGLN--RRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSW 418 (516)
T ss_pred HHHHHHHHcCCC--CCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCcccc
Confidence 579999999854 568999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC--CCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCc-ccceeeecceee
Q psy1886 81 PNPEQFNPDRFLPSESSK--RHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKT-MEDIRFQFGLTL 157 (170)
Q Consensus 81 ~~p~~f~p~R~l~~~~~~--~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~ 157 (170)
+||++|+||||++++... ...+.|+|||.|+|+|+|++||.+|+++++|.|+++|++++...... ........+.+.
T Consensus 419 ~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 498 (516)
T PLN02183 419 EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTA 498 (516)
T ss_pred CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccccc
Confidence 999999999999754422 24568999999999999999999999999999999999975432211 111112234443
Q ss_pred ecCCCceeEEeeC
Q psy1886 158 KTLPGNDIKLEPR 170 (170)
Q Consensus 158 ~p~~~~~v~~~~R 170 (170)
.+..++.+.+++|
T Consensus 499 ~~~~~~~~~~~~r 511 (516)
T PLN02183 499 PRATRLVAVPTYR 511 (516)
T ss_pred ccCCCcEEEeecC
Confidence 3444777777766
No 5
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.1e-40 Score=277.92 Aligned_cols=168 Identities=24% Similarity=0.476 Sum_probs=143.7
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccc-eeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIV-ARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||++++++. ..++++++++|||++|||+|++|++|+++.. .|.+.+|++++|+.||+|+.|.++.+++|+||++
T Consensus 325 l~~Ei~~~~~~~--~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~ 402 (499)
T PLN03234 325 AQDEVRNVIGDK--GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAA 402 (499)
T ss_pred HHHHHHHHhCCC--CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCccc
Confidence 579999999764 5689999999999999999999999999975 7999999999999999999999999999999999
Q ss_pred C-CCCCCCCCCCCCCCCCC---CCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCC-cccceeeecc
Q psy1886 80 W-PNPEQFNPDRFLPSESS---KRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCK-TMEDIRFQFG 154 (170)
Q Consensus 80 ~-~~p~~f~p~R~l~~~~~---~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~ 154 (170)
| +||++|+||||+++... ......|+|||.|+|.|+|+++|++|+++++|.|+++|+|++.+... .........+
T Consensus 403 ~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~ 482 (499)
T PLN03234 403 WGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTG 482 (499)
T ss_pred ccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccc
Confidence 9 89999999999975432 22456799999999999999999999999999999999997654321 1223444567
Q ss_pred eeeecCCCceeEEeeC
Q psy1886 155 LTLKTLPGNDIKLEPR 170 (170)
Q Consensus 155 ~~~~p~~~~~v~~~~R 170 (170)
++..|++.+.+..++|
T Consensus 483 ~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 483 LAMHKKEHLVLAPTKH 498 (499)
T ss_pred cccccCCCeEEEeecC
Confidence 7777888888888775
No 6
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=1.4e-40 Score=277.51 Aligned_cols=167 Identities=29% Similarity=0.543 Sum_probs=140.0
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccc-eeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIV-ARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++.+ ..++++++++|||++|||+|+||++|+++.. .|.+.+|++++|+.||+|+.|.++.+++|+|+++
T Consensus 330 l~~Ei~~v~~~~--~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~ 407 (503)
T PLN02394 330 LRDELDTVLGPG--NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPEL 407 (503)
T ss_pred HHHHHHHHhCCC--CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCccc
Confidence 589999999864 5678999999999999999999999999876 6888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC---CCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeec-ce
Q psy1886 80 WPNPEQFNPDRFLPSESS---KRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQF-GL 155 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~---~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~-~~ 155 (170)
|+||++|+||||++++.. ......|+|||.|+|+|+|++||++|+++++|.++++|+|++.... +..+..... ++
T Consensus 408 ~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~ 486 (503)
T PLN02394 408 WKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ-SKIDVSEKGGQF 486 (503)
T ss_pred CCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC-CcCccccccCce
Confidence 999999999999975432 2235679999999999999999999999999999999999653322 112233223 24
Q ss_pred eeecCCCceeEEeeC
Q psy1886 156 TLKTLPGNDIKLEPR 170 (170)
Q Consensus 156 ~~~p~~~~~v~~~~R 170 (170)
......++++++.+|
T Consensus 487 ~~~~~~~~~~~~~~r 501 (503)
T PLN02394 487 SLHIAKHSTVVFKPR 501 (503)
T ss_pred eeccCCCceEEeecC
Confidence 553445899999987
No 7
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=4.9e-41 Score=272.78 Aligned_cols=163 Identities=40% Similarity=0.725 Sum_probs=135.2
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCc-cceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVP-IVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~-~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++++ ..++.+++++||||+|||+|++|++|+++ .+.|.+.+|++++|+.||+|+.|.++.+++|+|+++
T Consensus 299 l~~Ei~~~~~~~--~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~ 376 (463)
T PF00067_consen 299 LREEIDSVLGDG--REITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEY 376 (463)
T ss_dssp HHHHHHHHTTTS--SSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTT
T ss_pred cccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999998654 57899999999999999999999999999 678999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeee
Q psy1886 80 WPNPEQFNPDRFLPSES-SKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLK 158 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 158 (170)
|+||++|+|+||++++. .......++|||.|+|.|+|++||.+|+++++|.|+++|+|++.+......... ..+++.
T Consensus 377 ~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~-~~~~~~- 454 (463)
T PF00067_consen 377 FPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQ-QNGFLL- 454 (463)
T ss_dssp SSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEEC-SCSSSE-
T ss_pred cccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccc-cCceEe-
Confidence 99999999999998776 345678899999999999999999999999999999999997633222221122 123444
Q ss_pred cCCCceeEE
Q psy1886 159 TLPGNDIKL 167 (170)
Q Consensus 159 p~~~~~v~~ 167 (170)
|..+++|++
T Consensus 455 ~~~~~~~~~ 463 (463)
T PF00067_consen 455 PPKPLKVKF 463 (463)
T ss_dssp EESSSEEEE
T ss_pred eCCCcEEeC
Confidence 444787764
No 8
>KOG0157|consensus
Probab=100.00 E-value=1.3e-40 Score=277.53 Aligned_cols=165 Identities=45% Similarity=0.827 Sum_probs=141.8
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeec-CEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLC-GYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
+++|++++++++. ..++....++|+|+++||+|||||||+++.+.|.+.+|+.++ |+.||||+.|+++.+++|+|+++
T Consensus 328 ~~eEi~~i~~~~~-~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~ 406 (497)
T KOG0157|consen 328 LREEVDEILGNRD-DKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRV 406 (497)
T ss_pred HHHHHHHHhCCCC-CCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccc
Confidence 5799999998642 223334444799999999999999999999999999999994 89999999999999999999999
Q ss_pred CC-CCCCCCCCCCCCCCCC-CCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceee
Q psy1886 80 WP-NPEQFNPDRFLPSESS-KRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTL 157 (170)
Q Consensus 80 ~~-~p~~f~p~R~l~~~~~-~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 157 (170)
|+ ||++|+||||+++... .+++++|+|||+|+|+|+|++||++|||++++.++++|+|++.. +.. .......++
T Consensus 407 ~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~---~~~-~~~~~~~~l 482 (497)
T KOG0157|consen 407 WGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVG---GDK-PKPVPELTL 482 (497)
T ss_pred cCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecC---CCC-ceeeeEEEE
Confidence 95 9999999999965333 55679999999999999999999999999999999999995432 221 445567889
Q ss_pred ecCCCceeEEeeC
Q psy1886 158 KTLPGNDIKLEPR 170 (170)
Q Consensus 158 ~p~~~~~v~~~~R 170 (170)
.|+.+++|++++|
T Consensus 483 ~~~~gl~v~~~~r 495 (497)
T KOG0157|consen 483 RPKNGLKVKLRPR 495 (497)
T ss_pred EecCCeEEEEEeC
Confidence 9999999999987
No 9
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=1.5e-40 Score=276.02 Aligned_cols=161 Identities=34% Similarity=0.566 Sum_probs=139.3
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCcc-ceeccCCceee-cCEEeCCCCEEEEechhhccCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPI-VARSSPEELHL-CGYTIPAGVTIAVFIYGLHRHPQ 78 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~-~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~ 78 (170)
|++||+++++++ ..++++++++|||++||++|+||+||+++. ++|.+.+|+++ +|+.||+|+.|.++.+++|+||+
T Consensus 320 l~~Ei~~v~~~~--~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~ 397 (482)
T PTZ00404 320 AYNEIKSTVNGR--NKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEK 397 (482)
T ss_pred HHHHHHHHhcCC--CCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCcc
Confidence 579999999864 567899999999999999999999999986 58999999999 99999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeee
Q psy1886 79 HWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLK 158 (170)
Q Consensus 79 ~~~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 158 (170)
+|+||++|+||||+++. .+..|+|||.|+|.|+|++||++|++++++.++++|+|++... ++.......++++.
T Consensus 398 ~~~dP~~F~PeRwl~~~----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~--~~~~~~~~~~~~~~ 471 (482)
T PTZ00404 398 YFENPEQFDPSRFLNPD----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDG--KKIDETEEYGLTLK 471 (482)
T ss_pred ccCCccccCccccCCCC----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCC--CCCCcccccceeec
Confidence 99999999999998642 4568999999999999999999999999999999999965322 22222223456666
Q ss_pred cCCCceeEEeeC
Q psy1886 159 TLPGNDIKLEPR 170 (170)
Q Consensus 159 p~~~~~v~~~~R 170 (170)
|. +++|.+++|
T Consensus 472 ~~-~~~v~~~~R 482 (482)
T PTZ00404 472 PN-KFKVLLEKR 482 (482)
T ss_pred CC-CceeeeecC
Confidence 54 899999987
No 10
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=3.5e-40 Score=281.22 Aligned_cols=164 Identities=32% Similarity=0.659 Sum_probs=141.7
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHW 80 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~ 80 (170)
|++|+++++++ ..++++++++||||+|||+|+|||+|+++.+.|++.+|++++||.||+|+.|.++.+.+|+||++|
T Consensus 428 LreEl~~v~~~---~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~if 504 (633)
T PLN02738 428 LQEEVDSVLGD---RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHW 504 (633)
T ss_pred HHHHHHHhcCC---CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCcccc
Confidence 58999999873 567999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCC---CCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceee
Q psy1886 81 PNPEQFNPDRFLPSES---SKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTL 157 (170)
Q Consensus 81 ~~p~~f~p~R~l~~~~---~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 157 (170)
+||++|+||||++... .......|+|||.|+|.|+|++||++|++++||.|+++|+|++.... .+.....+.+.
T Consensus 505 pdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~---~~~~~~~~~~~ 581 (633)
T PLN02738 505 DDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGA---PPVKMTTGATI 581 (633)
T ss_pred CCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC---CCcccccceEE
Confidence 9999999999984321 12345689999999999999999999999999999999999764321 22333345677
Q ss_pred ecCCCceeEEeeC
Q psy1886 158 KTLPGNDIKLEPR 170 (170)
Q Consensus 158 ~p~~~~~v~~~~R 170 (170)
.|.+++++++++|
T Consensus 582 ~p~~~l~v~l~~R 594 (633)
T PLN02738 582 HTTEGLKMTVTRR 594 (633)
T ss_pred eeCCCcEEEEEEC
Confidence 7888999999887
No 11
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=2.3e-40 Score=276.34 Aligned_cols=158 Identities=29% Similarity=0.530 Sum_probs=134.7
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceee-cCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHL-CGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||++++ +++++++|||++||++|+||+||+++...|.+.+|.++ +|+.||+|+.|.++.+++|+||++
T Consensus 338 l~~Ei~~v~--------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~ 409 (500)
T PLN02169 338 IRHEINTKF--------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSV 409 (500)
T ss_pred HHHHHHhhC--------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccc
Confidence 467776653 56889999999999999999999999888887766554 899999999999999999999999
Q ss_pred C-CCCCCCCCCCCCCCCCCCC--CCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeeccee
Q psy1886 80 W-PNPEQFNPDRFLPSESSKR--HPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLT 156 (170)
Q Consensus 80 ~-~~p~~f~p~R~l~~~~~~~--~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~ 156 (170)
| +||++|+||||++++.... .++.|+|||+|+|+|+|++||++|+++++|.|+++|+|++.+ .. .+....+++
T Consensus 410 w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~---~~-~~~~~~~~~ 485 (500)
T PLN02169 410 WGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIE---GH-KIEAIPSIL 485 (500)
T ss_pred cCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcC---CC-CcccccceE
Confidence 9 8999999999997654432 367899999999999999999999999999999999996532 11 223344577
Q ss_pred eecCCCceeEEeeC
Q psy1886 157 LKTLPGNDIKLEPR 170 (170)
Q Consensus 157 ~~p~~~~~v~~~~R 170 (170)
+.|+.+++|++++|
T Consensus 486 l~~~~gl~l~l~~~ 499 (500)
T PLN02169 486 LRMKHGLKVTVTKK 499 (500)
T ss_pred EecCCCEEEEEEeC
Confidence 88999999999987
No 12
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=3.7e-40 Score=275.33 Aligned_cols=166 Identities=27% Similarity=0.550 Sum_probs=142.4
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCcc-ceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPI-VARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~-~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++|++++++++ ..++++++++|||++||++|++|++|+++. +.|.+.+|+.++|+.||+|+.|.++.+++|+|+++
T Consensus 326 l~~Ei~~~~~~~--~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~ 403 (504)
T PLN00110 326 AHEEMDQVIGRN--RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDV 403 (504)
T ss_pred HHHHHHHHhCCC--CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhh
Confidence 579999998864 568999999999999999999999999987 68999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCC----CCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecce
Q psy1886 80 WPNPEQFNPDRFLPSESSKR----HPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGL 155 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~~~----~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~ 155 (170)
|+||++|+||||++++.... ....++|||.|+|.|+|++||.+|+++++|.|+++|+|++.+. ...+.....++
T Consensus 404 ~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~--~~~~~~~~~~~ 481 (504)
T PLN00110 404 WENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG--VELNMDEAFGL 481 (504)
T ss_pred cCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC--CccCccccccc
Confidence 99999999999996543221 2357999999999999999999999999999999999975332 12222223456
Q ss_pred eeecCCCceeEEeeC
Q psy1886 156 TLKTLPGNDIKLEPR 170 (170)
Q Consensus 156 ~~~p~~~~~v~~~~R 170 (170)
++.|+.++++++++|
T Consensus 482 ~~~~~~~~~~~~~~r 496 (504)
T PLN00110 482 ALQKAVPLSAMVTPR 496 (504)
T ss_pred ccccCCCceEeeccC
Confidence 777888999999887
No 13
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=4.3e-40 Score=275.73 Aligned_cols=167 Identities=27% Similarity=0.478 Sum_probs=140.7
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccc-eeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIV-ARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
+++||+++++++ ...++++++++|||++||++|++|++|+++.. .|.+.+|++++|+.||+|+.|.++.+++|+||++
T Consensus 343 l~~Ei~~v~~~~-~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~ 421 (519)
T PLN00168 343 LHDEIKAKTGDD-QEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDERE 421 (519)
T ss_pred HHHHHHHHhCCC-CCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccc
Confidence 579999999753 35679999999999999999999999999875 7999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC------CCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeec
Q psy1886 80 WPNPEQFNPDRFLPSES------SKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQF 153 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~------~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~ 153 (170)
|++|++|+||||+++.. .....+.|+|||.|+|+|+|++||.+|++++++.|+++|+|++... ...++....
T Consensus 422 ~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~--~~~~~~~~~ 499 (519)
T PLN00168 422 WERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPG--DEVDFAEKR 499 (519)
T ss_pred cCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCC--CcCChhhhc
Confidence 99999999999996422 1123467999999999999999999999999999999999965432 112222223
Q ss_pred ceeeecCCCceeEEeeC
Q psy1886 154 GLTLKTLPGNDIKLEPR 170 (170)
Q Consensus 154 ~~~~~p~~~~~v~~~~R 170 (170)
+++..+..+++|++++|
T Consensus 500 ~~~~~~~~~~~~~~~~R 516 (519)
T PLN00168 500 EFTTVMAKPLRARLVPR 516 (519)
T ss_pred eeEEeecCCcEEEEEec
Confidence 45666777899999887
No 14
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=4.4e-40 Score=273.87 Aligned_cols=163 Identities=25% Similarity=0.422 Sum_probs=135.9
Q ss_pred CHHHHHHHhCC---CCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCC
Q psy1886 1 VYNEIQAILGN---DPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHP 77 (170)
Q Consensus 1 l~~Ei~~~~~~---~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~ 77 (170)
|++||+++++. .+...++++++++|||++||++|++|++|+++.+.|.+.+|++++||.||||+.|.++.+++|+||
T Consensus 316 l~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp 395 (490)
T PLN02500 316 LREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDS 395 (490)
T ss_pred HHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCc
Confidence 57899998742 112458999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-------CCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCccccee
Q psy1886 78 QHWPNPEQFNPDRFLPSESSK-------RHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIR 150 (170)
Q Consensus 78 ~~~~~p~~f~p~R~l~~~~~~-------~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~ 150 (170)
++|+||++|+||||++++... ..++.|+|||.|+|.|+|++||.+|+++++|.|+++|+|++.... ....
T Consensus 396 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~---~~~~ 472 (490)
T PLN02500 396 SLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD---QAFA 472 (490)
T ss_pred ccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC---ccee
Confidence 999999999999999754321 245789999999999999999999999999999999999653321 1111
Q ss_pred eecceeeecCCCceeEEee
Q psy1886 151 FQFGLTLKTLPGNDIKLEP 169 (170)
Q Consensus 151 ~~~~~~~~p~~~~~v~~~~ 169 (170)
.... .+..+++|++++
T Consensus 473 --~~~~-~~~~~l~~~~~~ 488 (490)
T PLN02500 473 --FPFV-DFPKGLPIRVRR 488 (490)
T ss_pred --cccc-cCCCCceEEEEe
Confidence 1222 334589998875
No 15
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=4.4e-40 Score=274.73 Aligned_cols=167 Identities=26% Similarity=0.522 Sum_probs=143.1
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceee-cCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHL-CGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++.+ ...++++++++||||+|||+|+||++|+++...|.+.+|.++ +|+.||+|+.|.++.+++|+|+++
T Consensus 330 l~~Ei~~~~~~~-~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~ 408 (502)
T PLN02426 330 IREEADRVMGPN-QEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERI 408 (502)
T ss_pred HHHHHHHhhCCC-CCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccc
Confidence 579999998754 246899999999999999999999999999888999888777 899999999999999999999999
Q ss_pred C-CCCCCCCCCCCCCCCCC-CCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceee
Q psy1886 80 W-PNPEQFNPDRFLPSESS-KRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTL 157 (170)
Q Consensus 80 ~-~~p~~f~p~R~l~~~~~-~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 157 (170)
| +||++|+||||++++.. ...++.++|||.|+|.|+|++||++|++++++.++++|++++.... ...+....++++
T Consensus 409 ~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~ 486 (502)
T PLN02426 409 WGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRS--NRAPRFAPGLTA 486 (502)
T ss_pred cCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCC--CCCCcccceeEE
Confidence 9 99999999999974321 2345679999999999999999999999999999999999753221 112334456788
Q ss_pred ecCCCceeEEeeC
Q psy1886 158 KTLPGNDIKLEPR 170 (170)
Q Consensus 158 ~p~~~~~v~~~~R 170 (170)
.|+++++|++++|
T Consensus 487 ~~~~gl~v~~~~r 499 (502)
T PLN02426 487 TVRGGLPVRVRER 499 (502)
T ss_pred ecCCCEEEEEEEc
Confidence 8999999999887
No 16
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=6.8e-40 Score=271.32 Aligned_cols=164 Identities=33% Similarity=0.575 Sum_probs=142.8
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccc-eeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIV-ARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++.+ . ++++++++|||++|+++|+||++|+++.. .|.+.+|++++|+.||+|+.|+++.+++|+|+++
T Consensus 299 l~~Ei~~~~~~~--~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~ 375 (466)
T PLN02655 299 LYREIREVCGDE--R-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKR 375 (466)
T ss_pred HHHHHHHHhCCC--C-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCccc
Confidence 579999999863 3 89999999999999999999999998876 6999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeeec
Q psy1886 80 WPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKT 159 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p 159 (170)
|++|++|+|+||++.+......+.++|||.|+|.|+|++||..|++++++.|+++|+|++..... ......+++..+
T Consensus 376 ~~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~ 452 (466)
T PLN02655 376 WENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE---EKEDTVQLTTQK 452 (466)
T ss_pred CCChhccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc---cccchhheeEee
Confidence 99999999999997654433457899999999999999999999999999999999997643221 122234677778
Q ss_pred CCCceeEEeeC
Q psy1886 160 LPGNDIKLEPR 170 (170)
Q Consensus 160 ~~~~~v~~~~R 170 (170)
++++++++++|
T Consensus 453 ~~~~~~~~~~r 463 (466)
T PLN02655 453 LHPLHAHLKPR 463 (466)
T ss_pred cCCcEEEEeec
Confidence 88999999876
No 17
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=5.9e-40 Score=274.55 Aligned_cols=161 Identities=31% Similarity=0.616 Sum_probs=140.3
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHW 80 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~ 80 (170)
|++||++++++ ..++++++++|||++|||+|+||++|+++.+.|.+.+|++++|+.||+|+.|.++.+++|+||++|
T Consensus 353 l~~Ei~~v~~~---~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~ 429 (516)
T PLN02290 353 VRAEVAEVCGG---ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELW 429 (516)
T ss_pred HHHHHHHHhCC---CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhh
Confidence 57999999985 367999999999999999999999999988899999999999999999999999999999999999
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeeec
Q psy1886 81 -PNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKT 159 (170)
Q Consensus 81 -~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p 159 (170)
+||++|+||||++... .....|+|||.|+|.|+|++||++|++++++.|+++|++++.+.. . .....+++..|
T Consensus 430 ~~dP~~F~PeRfl~~~~--~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~--~--~~~~~~~~~~p 503 (516)
T PLN02290 430 GKDANEFNPDRFAGRPF--APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNY--R--HAPVVVLTIKP 503 (516)
T ss_pred CCChhhcCccccCCCCC--CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCc--c--cCccceeeecC
Confidence 8999999999995321 234579999999999999999999999999999999999653321 1 11123577889
Q ss_pred CCCceeEEeeC
Q psy1886 160 LPGNDIKLEPR 170 (170)
Q Consensus 160 ~~~~~v~~~~R 170 (170)
..+++|++++|
T Consensus 504 ~~~~~~~~~~~ 514 (516)
T PLN02290 504 KYGVQVCLKPL 514 (516)
T ss_pred CCCCeEEEEeC
Confidence 99999999987
No 18
>KOG0159|consensus
Probab=100.00 E-value=3.4e-40 Score=268.18 Aligned_cols=165 Identities=36% Similarity=0.662 Sum_probs=149.6
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHW 80 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~ 80 (170)
|++|+.+++.++ +..++-+.+.+||||+|||||++||||.++...|+..+|++++||.|||||.|.++.+.+.+||++|
T Consensus 353 L~~Ei~~~~p~~-~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F 431 (519)
T KOG0159|consen 353 LREEILAVLPSG-NSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYF 431 (519)
T ss_pred HHHHHHhhCCCc-ccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhC
Confidence 578999998874 4678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeeecC
Q psy1886 81 PNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKTL 160 (170)
Q Consensus 81 ~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~ 160 (170)
++|++|.|||||++.....+++.++|||.|+|+|+|++||.+||.++||.++++|+++.. .+ .++.....+++.|.
T Consensus 432 ~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~---~~-~pv~~~~~~il~P~ 507 (519)
T KOG0159|consen 432 PDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFL---HE-EPVEYVYRFILVPN 507 (519)
T ss_pred CCccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeec---CC-CCccceeEEEEcCC
Confidence 999999999999877566788999999999999999999999999999999999999542 22 34566677888899
Q ss_pred CCceeEEeeC
Q psy1886 161 PGNDIKLEPR 170 (170)
Q Consensus 161 ~~~~v~~~~R 170 (170)
.++++++++|
T Consensus 508 ~~l~f~f~~r 517 (519)
T KOG0159|consen 508 RPLRFKFRPR 517 (519)
T ss_pred CCcceeeeeC
Confidence 9999999876
No 19
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=9.9e-40 Score=273.25 Aligned_cols=166 Identities=30% Similarity=0.528 Sum_probs=138.3
Q ss_pred CHHHHHHHhCCC------------------CCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceee-cCEEeC
Q psy1886 1 VYNEIQAILGND------------------PDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHL-CGYTIP 61 (170)
Q Consensus 1 l~~Ei~~~~~~~------------------~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~-~g~~ip 61 (170)
|++||++++++. ....++++++++||||+|||+|+||++|+++...|.+.+|.++ +|+.||
T Consensus 329 l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~Ip 408 (516)
T PLN03195 329 LYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVK 408 (516)
T ss_pred HHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEEC
Confidence 578999887531 0245789999999999999999999999999887777777665 899999
Q ss_pred CCCEEEEechhhccCCCCC-CCCCCCCCCCCCCCCC-CCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEee
Q psy1886 62 AGVTIAVFIYGLHRHPQHW-PNPEQFNPDRFLPSES-SKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLV 139 (170)
Q Consensus 62 ~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~ 139 (170)
||+.|.++.+++|+||++| +||++|+||||++++. ....++.|+|||.|+|+|+|++||++|+++++|.|+++|++++
T Consensus 409 kGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~ 488 (516)
T PLN03195 409 AGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQL 488 (516)
T ss_pred CCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEe
Confidence 9999999999999999999 9999999999996443 2334567999999999999999999999999999999999975
Q ss_pred cCcCCcccceeeecceeeecCCCceeEEeeC
Q psy1886 140 GDRCKTMEDIRFQFGLTLKTLPGNDIKLEPR 170 (170)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 170 (170)
... . +.......+..|..+++|++++|
T Consensus 489 ~~~--~--~~~~~~~~~~~~~~~~~v~~~~r 515 (516)
T PLN03195 489 VPG--H--PVKYRMMTILSMANGLKVTVSRR 515 (516)
T ss_pred cCC--C--cceeeeeeEEecCCCEEEEEEeC
Confidence 321 1 22223345667888999999887
No 20
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=2.6e-39 Score=270.92 Aligned_cols=168 Identities=32% Similarity=0.631 Sum_probs=139.8
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCcc-ceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPI-VARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~-~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++.+ ..++++++++|||++||++|+||++|+++. +.|.+.+|++++|+.||+|+.|.++.+++|+|+++
T Consensus 334 l~~Ei~~~~~~~--~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~ 411 (517)
T PLN02687 334 AQEELDAVVGRD--RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQ 411 (517)
T ss_pred HHHHHHHHcCCC--CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCccc
Confidence 579999998764 668999999999999999999999999986 58999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC-----CCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCC-cccceeeec
Q psy1886 80 WPNPEQFNPDRFLPSESS-----KRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCK-TMEDIRFQF 153 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~-----~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~ 153 (170)
|+||++|+||||++++.. ......++|||.|+|.|+|++||.+|+++++|.|+++|+|++.+... ...+.....
T Consensus 412 ~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~ 491 (517)
T PLN02687 412 WPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAY 491 (517)
T ss_pred CCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCccccc
Confidence 999999999999975322 12346799999999999999999999999999999999997543211 111122233
Q ss_pred ceeeecCCCceeEEeeC
Q psy1886 154 GLTLKTLPGNDIKLEPR 170 (170)
Q Consensus 154 ~~~~~p~~~~~v~~~~R 170 (170)
++...+..++++++++|
T Consensus 492 ~~~~~~~~~~~~~~~~R 508 (517)
T PLN02687 492 GLTLQRAVPLMVHPRPR 508 (517)
T ss_pred ceeeecCCCeEEeeccC
Confidence 44555666788888776
No 21
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=2e-39 Score=268.26 Aligned_cols=161 Identities=26% Similarity=0.433 Sum_probs=136.4
Q ss_pred CHHHHHHHhCCC-CCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGND-PDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~-~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++.. ++..++++++++|||++||++|+||++|+++.+.|.+.+|++++|+.||||+.|+++.+++|+||++
T Consensus 301 l~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~ 380 (463)
T PLN02774 301 LRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFL 380 (463)
T ss_pred HHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCccc
Confidence 578999998642 1356899999999999999999999999998888999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeeec
Q psy1886 80 WPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKT 159 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p 159 (170)
|+||++|+||||++.+... ...|+|||+|+|.|+|++||.+|++++++.|+++|+|++.+. ..... . .+..|
T Consensus 381 ~~dP~~F~PeRfl~~~~~~--~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~---~~~~~--~-~~~~p 452 (463)
T PLN02774 381 YPDPMTFNPWRWLDKSLES--HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGG---DKLMK--F-PRVEA 452 (463)
T ss_pred CCChhccCchhcCCCCcCC--CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCC---Ccccc--C-CCCCC
Confidence 9999999999999654221 236999999999999999999999999999999999965332 11111 1 13447
Q ss_pred CCCceeEEee
Q psy1886 160 LPGNDIKLEP 169 (170)
Q Consensus 160 ~~~~~v~~~~ 169 (170)
+++++|++++
T Consensus 453 ~~g~~~~~~~ 462 (463)
T PLN02774 453 PNGLHIRVSP 462 (463)
T ss_pred CCCceEEeee
Confidence 7899999875
No 22
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=6.4e-39 Score=269.43 Aligned_cols=166 Identities=25% Similarity=0.460 Sum_probs=139.7
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccc-eeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIV-ARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
+++||+++++.+ ..++.+++++|||++||++|++|++|+++.. .|.+.+|+.++|+.||||+.|.++.+++|+||++
T Consensus 351 l~~Ei~~v~~~~--~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~ 428 (534)
T PLN03018 351 ALKELDEVVGKD--RLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKI 428 (534)
T ss_pred HHHHHHHHhCCC--CCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCccc
Confidence 579999999764 6689999999999999999999999999876 6889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCC------CCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeec
Q psy1886 80 WPNPEQFNPDRFLPSESSK------RHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQF 153 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~~------~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~ 153 (170)
|++|++|+||||+++++.. .....++|||.|+|.|+|++||.+|+++++|.|+++|+|++.... ...++....
T Consensus 429 ~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~ 507 (534)
T PLN03018 429 WKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF-GPLSLEEDD 507 (534)
T ss_pred CCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC-CCCCccccc
Confidence 9999999999999654321 235679999999999999999999999999999999999754321 111222223
Q ss_pred ceeeecCCCceeEEeeC
Q psy1886 154 GLTLKTLPGNDIKLEPR 170 (170)
Q Consensus 154 ~~~~~p~~~~~v~~~~R 170 (170)
+.+..| .++.|.+++|
T Consensus 508 ~~~~~p-~~~~v~~~~R 523 (534)
T PLN03018 508 ASLLMA-KPLLLSVEPR 523 (534)
T ss_pred cceecC-CCeEEEEEec
Confidence 444444 5899999987
No 23
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=4.4e-39 Score=268.60 Aligned_cols=141 Identities=28% Similarity=0.632 Sum_probs=126.4
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCcc-ceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPI-VARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~-~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++.++...++++++++|||++|+++|+||++|+++. +.|.+.+|++++|+.||+|+.|.++.+++|+||++
T Consensus 326 l~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~ 405 (502)
T PLN02966 326 AQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKE 405 (502)
T ss_pred HHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCccc
Confidence 57999999975423457999999999999999999999999997 48999999999999999999999999999999999
Q ss_pred C-CCCCCCCCCCCCCCCCC-CCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecC
Q psy1886 80 W-PNPEQFNPDRFLPSESS-KRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGD 141 (170)
Q Consensus 80 ~-~~p~~f~p~R~l~~~~~-~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~ 141 (170)
| ++|++|+||||++++.. ......|+|||.|+|+|+|++||.+|+++++|.|+++|+|++..
T Consensus 406 ~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~ 469 (502)
T PLN02966 406 WGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPN 469 (502)
T ss_pred ccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCC
Confidence 9 99999999999975432 22456899999999999999999999999999999999997543
No 24
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=268.24 Aligned_cols=168 Identities=24% Similarity=0.452 Sum_probs=140.5
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCcc-ceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPI-VARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~-~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++++ +.++++++++|||++|+|+|++|++|+++. +.|.+.+|+.++|+.||+|+.|.++.+++|+||++
T Consensus 333 l~~Ei~~~~~~~--~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~ 410 (514)
T PLN03112 333 IQEELDSVVGRN--RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKI 410 (514)
T ss_pred HHHHHHHhcCCC--CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCccc
Confidence 589999998864 568999999999999999999999999987 48999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC---CC--CCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcC-Ccccceeeec
Q psy1886 80 WPNPEQFNPDRFLPSES---SK--RHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRC-KTMEDIRFQF 153 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~---~~--~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~ 153 (170)
|+||++|+||||+++.. .. ...+.|+|||.|+|.|+|++||++|++++++.++++|+|++.... ..........
T Consensus 411 ~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~ 490 (514)
T PLN03112 411 WDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVY 490 (514)
T ss_pred CCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCcccc
Confidence 99999999999875321 11 224679999999999999999999999999999999999754221 1111222334
Q ss_pred ceeeecCCCceeEEeeC
Q psy1886 154 GLTLKTLPGNDIKLEPR 170 (170)
Q Consensus 154 ~~~~~p~~~~~v~~~~R 170 (170)
++.+.+..++.+++++|
T Consensus 491 ~~~~~~~~~~~~~~~~r 507 (514)
T PLN03112 491 GMTMPKAKPLRAVATPR 507 (514)
T ss_pred CcccccCCCeEEEeecC
Confidence 55666666999999987
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=7.1e-39 Score=264.29 Aligned_cols=160 Identities=21% Similarity=0.342 Sum_probs=137.9
Q ss_pred CHHHHHHHhCCC--CCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCC
Q psy1886 1 VYNEIQAILGND--PDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQ 78 (170)
Q Consensus 1 l~~Ei~~~~~~~--~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~ 78 (170)
|++|++++++.. ....++++++.+|||++|||+|++|++|+++.+.|.+.+|++++||.||+|+.|.++.+++|+|++
T Consensus 288 l~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~ 367 (452)
T PLN03141 288 LTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEE 367 (452)
T ss_pred HHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCch
Confidence 478998887421 134579999999999999999999999998878899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeee
Q psy1886 79 HWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLK 158 (170)
Q Consensus 79 ~~~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 158 (170)
+|+||++|+||||++... .+..|+|||.|+|.|+|++||.+|+++++|.|+++|+|++. +... . ...++.
T Consensus 368 ~~~dP~~F~PeRfl~~~~---~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~---~~~~-~---~~~~~~ 437 (452)
T PLN03141 368 NYDNPYQFNPWRWQEKDM---NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAE---EDTI-V---NFPTVR 437 (452)
T ss_pred hcCCccccCcccccCCCC---CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecC---CCCe-e---eccccc
Confidence 999999999999997532 35679999999999999999999999999999999999642 2221 1 124678
Q ss_pred cCCCceeEEeeC
Q psy1886 159 TLPGNDIKLEPR 170 (170)
Q Consensus 159 p~~~~~v~~~~R 170 (170)
|..++.|.+++|
T Consensus 438 ~~~~~~~~~~~~ 449 (452)
T PLN03141 438 MKRKLPIWVTRI 449 (452)
T ss_pred CCCCceEEEEeC
Confidence 888999999987
No 26
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=1e-37 Score=258.83 Aligned_cols=164 Identities=21% Similarity=0.366 Sum_probs=140.5
Q ss_pred CHHHHHHHhCCC-CCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGND-PDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~-~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
+++|++++.+.. ....++++++.+|||++|+++|++|++|+++.+.|.+.+|++++|+.||+|+.|+++.+.+|+|+++
T Consensus 304 l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~ 383 (472)
T PLN02987 304 LKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEY 383 (472)
T ss_pred HHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCccc
Confidence 478999887532 1245789999999999999999999999988778999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeeec
Q psy1886 80 WPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKT 159 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p 159 (170)
|++|++|+||||++..........++|||.|+|.|+|++||.+|++++++.|+++|+|++.+ .. ++.. ..+..|
T Consensus 384 ~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~---~~-~~~~--~~~~~p 457 (472)
T PLN02987 384 FKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAE---QD-KLVF--FPTTRT 457 (472)
T ss_pred CCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECC---CC-ceee--cccccC
Confidence 99999999999997544333456799999999999999999999999999999999996532 21 2222 347788
Q ss_pred CCCceeEEeeC
Q psy1886 160 LPGNDIKLEPR 170 (170)
Q Consensus 160 ~~~~~v~~~~R 170 (170)
.+++++++++|
T Consensus 458 ~~~~~~~~~~r 468 (472)
T PLN02987 458 QKRYPINVKRR 468 (472)
T ss_pred CCCceEEEEec
Confidence 88999999887
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=5.9e-38 Score=259.60 Aligned_cols=160 Identities=29% Similarity=0.510 Sum_probs=138.1
Q ss_pred CHHHHHHHhCCCC-CCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDP-DKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~-~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++|++++.+..+ ...++++++++|||++|+++|++|++|+++...|.+.+|+.++||.||||+.|.++.+++|+|+++
T Consensus 301 l~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~ 380 (463)
T PLN02196 301 VTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADI 380 (463)
T ss_pred HHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchh
Confidence 4789998886431 356899999999999999999999999998888999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeeec
Q psy1886 80 WPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKT 159 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p 159 (170)
|+||++|+||||++.. .+..++|||.|+|.|+|++||++|++++++.|+++|+|++.+ ...... ...+..|
T Consensus 381 ~~dP~~F~PeRfl~~~----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~---~~~~~~--~~~~~~p 451 (463)
T PLN02196 381 FSDPGKFDPSRFEVAP----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVG---TSNGIQ--YGPFALP 451 (463)
T ss_pred cCCcCccChhhhcCCC----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcC---CCCceE--EcccccC
Confidence 9999999999998532 356899999999999999999999999999999999996543 222232 3334568
Q ss_pred CCCceeEEee
Q psy1886 160 LPGNDIKLEP 169 (170)
Q Consensus 160 ~~~~~v~~~~ 169 (170)
+++++|+++.
T Consensus 452 ~~~~~~~~~~ 461 (463)
T PLN02196 452 QNGLPIALSR 461 (463)
T ss_pred CCCceEEEec
Confidence 9999998875
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=8.2e-38 Score=259.72 Aligned_cols=162 Identities=25% Similarity=0.447 Sum_probs=138.3
Q ss_pred CHHHHHHHhCCCC--CCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCC
Q psy1886 1 VYNEIQAILGNDP--DKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQ 78 (170)
Q Consensus 1 l~~Ei~~~~~~~~--~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~ 78 (170)
|++|+++++++.. ...++++++++|||++|+|+|++|++|+++...|.+.+|++++|+.||+|+.|.++.+++|+|++
T Consensus 324 l~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~ 403 (490)
T PLN02302 324 AKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPE 403 (490)
T ss_pred HHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcc
Confidence 5789999987431 12378999999999999999999999998888899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeee
Q psy1886 79 HWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLK 158 (170)
Q Consensus 79 ~~~~p~~f~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 158 (170)
+|+||++|+|+||++.. ..+..++|||.|+|.|+|++||.+|++++++.++++|+|++.++ ...+. ......
T Consensus 404 ~~~dP~~F~PeR~~~~~---~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~---~~~~~--~~~~~~ 475 (490)
T PLN02302 404 VYPNPKEFDPSRWDNYT---PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP---GCKVM--YLPHPR 475 (490)
T ss_pred cCCCccccChhhcCCCC---CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC---CCcce--eCCCCC
Confidence 99999999999998643 24567999999999999999999999999999999999965432 11222 222367
Q ss_pred cCCCceeEEeeC
Q psy1886 159 TLPGNDIKLEPR 170 (170)
Q Consensus 159 p~~~~~v~~~~R 170 (170)
|.+++.+++++|
T Consensus 476 p~~~~~~~~~~~ 487 (490)
T PLN02302 476 PKDNCLARITKV 487 (490)
T ss_pred CCCCceEEEEec
Confidence 888999999876
No 29
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=9e-38 Score=260.09 Aligned_cols=163 Identities=33% Similarity=0.637 Sum_probs=136.8
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccc-eeccCCceeecCEEeCCCCEEEEechhhccCCCC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIV-ARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQH 79 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 79 (170)
|++||+++++. ..++++++++||||+||++|+||++|+++.. .|.+..|+.++|+.||+|+.|+++.+++|+||++
T Consensus 315 l~~Ei~~~~~~---~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~ 391 (489)
T PLN02936 315 AQEELDRVLQG---RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEV 391 (489)
T ss_pred HHHHHHHHhcC---CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhh
Confidence 58999999875 3478999999999999999999999998875 4555677778999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC---CCCCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeeccee
Q psy1886 80 WPNPEQFNPDRFLPSESS---KRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLT 156 (170)
Q Consensus 80 ~~~p~~f~p~R~l~~~~~---~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~ 156 (170)
|+||++|+||||++++.. ...+..|+|||.|+|.|+|++||++|++++++.|+++|+++++.. + ......+++
T Consensus 392 ~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~--~--~~~~~~~~~ 467 (489)
T PLN02936 392 WERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPD--Q--DIVMTTGAT 467 (489)
T ss_pred CCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCC--C--ccceecceE
Confidence 999999999999964321 122457999999999999999999999999999999999965432 1 122234566
Q ss_pred eecCCCceeEEeeC
Q psy1886 157 LKTLPGNDIKLEPR 170 (170)
Q Consensus 157 ~~p~~~~~v~~~~R 170 (170)
..|+.+++|++++|
T Consensus 468 ~~~~~~~~v~~~~R 481 (489)
T PLN02936 468 IHTTNGLYMTVSRR 481 (489)
T ss_pred EeeCCCeEEEEEee
Confidence 77888999999887
No 30
>KOG0684|consensus
Probab=100.00 E-value=5.8e-38 Score=250.76 Aligned_cols=166 Identities=33% Similarity=0.615 Sum_probs=145.2
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeecC----EEeCCCCEEEEechhhccC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCG----YTIPAGVTIAVFIYGLHRH 76 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g----~~ip~g~~v~~~~~~~~~d 76 (170)
+++|+.+++|++ ...++++++++||.|++||+|||||+||.+.+.|.+.+|.++.+ |.||+|..|.++...+|+|
T Consensus 310 ~~eE~k~vlG~~-~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~ 388 (486)
T KOG0684|consen 310 VREEQKRVLGEK-KEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRD 388 (486)
T ss_pred HHHHHHHHhhcc-CCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCC
Confidence 479999999886 35599999999999999999999999998889999999999966 9999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC---C--CCCccccCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceee
Q psy1886 77 PQHWPNPEQFNPDRFLPSESSK---R--HPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRF 151 (170)
Q Consensus 77 ~~~~~~p~~f~p~R~l~~~~~~---~--~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~ 151 (170)
|++|++|++|+|+||++++++. . -.+.+||||+|.+.|||+.||.+|++.++..+|++||+++.++ +.+.+++
T Consensus 389 peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~--~~P~~d~ 466 (486)
T KOG0684|consen 389 PEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG--PFPEVDY 466 (486)
T ss_pred ccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC--CCCCCCH
Confidence 9999999999999999766554 1 2355799999999999999999999999999999999977653 3334443
Q ss_pred ecceeeecCCCceeEEeeC
Q psy1886 152 QFGLTLKTLPGNDIKLEPR 170 (170)
Q Consensus 152 ~~~~~~~p~~~~~v~~~~R 170 (170)
. ..++.|..++++++|.|
T Consensus 467 s-~~v~~P~g~v~irYK~R 484 (486)
T KOG0684|consen 467 S-RMVMQPEGDVRIRYKRR 484 (486)
T ss_pred H-HhhcCCCCCceEEEeec
Confidence 3 34778999999999987
No 31
>PLN02648 allene oxide synthase
Probab=100.00 E-value=2.4e-33 Score=232.73 Aligned_cols=136 Identities=24% Similarity=0.471 Sum_probs=118.4
Q ss_pred CHHHHHHHhCCCCCCCCCHHHhcCCHHHHHHHHHHccCCCCCccceeccCCceeec----CEEeCCCCEEEEechhhccC
Q psy1886 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLC----GYTIPAGVTIAVFIYGLHRH 76 (170)
Q Consensus 1 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~----g~~ip~g~~v~~~~~~~~~d 76 (170)
|++||+++++.. ...++++++++|||++++++|+||++|+++...|++.+|++++ ||.||+|+.|+++.+.+|+|
T Consensus 310 lr~Ei~~~~~~~-~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrd 388 (480)
T PLN02648 310 LAEEVRSAVKAG-GGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRD 388 (480)
T ss_pred HHHHHHHHhccC-CCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCC
Confidence 579999998642 3568999999999999999999999999998888899999996 79999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcccc---------CCCCCCCcccHHHHHHHHHHHHHHHhhccE-Eee
Q psy1886 77 PQHWPNPEQFNPDRFLPSESSKRHPNAFMP---------FSLGARNCLGYKYAMLQMKVTVSTILRRYK-VLV 139 (170)
Q Consensus 77 ~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~---------Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~-~~~ 139 (170)
+++|+||++|+|+||+++.... ...+++ ||+|+|.|+|++||++|++++++.|+++|+ |++
T Consensus 389 p~~~~dP~~F~PeRf~~~~~~~--~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l 459 (480)
T PLN02648 389 PKVFDRPEEFVPDRFMGEEGEK--LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEI 459 (480)
T ss_pred cccCCCcceeCCCCCCCCCccc--cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEee
Confidence 9999999999999998643321 123333 367889999999999999999999999998 954
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=3.5e-30 Score=210.50 Aligned_cols=130 Identities=37% Similarity=0.698 Sum_probs=110.9
Q ss_pred HHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEechhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy1886 26 DLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFM 105 (170)
Q Consensus 26 p~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~ 105 (170)
||+.++++|+||++|+++...|.+.+|++++|+.||+|+.|.++.+++|+||++|++|++|+|+||. ..++
T Consensus 280 ~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~---------~~~l 350 (411)
T COG2124 280 PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN---------NAHL 350 (411)
T ss_pred HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC---------CCCc
Confidence 6999999999999999999889999999999999999999999999999999999999999999995 6799
Q ss_pred cCCCCCCCcccHHHHHHHHHHHHHHHhhccEEeecCcCCcccceeeecceeeecCCCceeEEee
Q psy1886 106 PFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEP 169 (170)
Q Consensus 106 ~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~ 169 (170)
|||+|+|.|+|..||++|++++++.++++|++.... ..... ....+..+.....+.++.
T Consensus 351 ~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~---~~~~~--~~~~~~~~~g~~~l~v~~ 409 (411)
T COG2124 351 PFGGGPHRCLGAALARLELKVALAELLRRFPLLLLA---EPPPL--VRRPTLVPRGGERLPVRR 409 (411)
T ss_pred CCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcC---CCCCc--cccccccCCCcceeeeec
Confidence 999999999999999999999999999999995322 21111 223344455556665554
No 33
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=67.80 E-value=2 Score=32.07 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEE
Q psy1886 25 LDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAV 68 (170)
Q Consensus 25 lp~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~ 68 (170)
-..+.|||.|+.-+.... .+.=+..+|+.++|..||+|+.++.
T Consensus 52 ~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence 345668888887665432 2222357889999999999998876
No 34
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=63.12 E-value=5.8 Score=23.53 Aligned_cols=7 Identities=57% Similarity=1.540 Sum_probs=5.5
Q ss_pred CCCCCCC
Q psy1886 87 NPDRFLP 93 (170)
Q Consensus 87 ~p~R~l~ 93 (170)
||||||.
T Consensus 44 DPERWLP 50 (59)
T PF08492_consen 44 DPERWLP 50 (59)
T ss_pred CccccCc
Confidence 7888885
No 35
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=58.98 E-value=7.9 Score=27.09 Aligned_cols=22 Identities=32% Similarity=0.667 Sum_probs=16.6
Q ss_pred CcccHHHHHHHHHHHHHHHhhc
Q psy1886 113 NCLGYKYAMLQMKVTVSTILRR 134 (170)
Q Consensus 113 ~C~G~~la~~e~~~~l~~ll~~ 134 (170)
+|.|+.||...+..+|..++..
T Consensus 19 N~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 19 NCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp ETTS----HHHHHHHHHHHHHS
T ss_pred cccchHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999873
No 36
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=47.25 E-value=5.2 Score=33.18 Aligned_cols=43 Identities=16% Similarity=0.186 Sum_probs=27.4
Q ss_pred HHHHHHHHHHccCCCCCccceeccCCceeecCEEeCCCCEEEEe
Q psy1886 26 DLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVF 69 (170)
Q Consensus 26 p~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~ 69 (170)
..+.|||+|+.-+.-.. .+.=+..+|+.++|..||+|+.|+..
T Consensus 256 n~I~A~V~~~qtv~~G~-~vrlRLle~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 256 NTIRACVHETQTVVDGS-AVKLRLLEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred CceEEEEcCceEEecCC-EEEEEEcCceeeCCEEecCCCEEEEE
Confidence 44556666665544321 22223467888899999999987764
No 37
>KOG3506|consensus
Probab=34.29 E-value=19 Score=20.88 Aligned_cols=11 Identities=36% Similarity=0.791 Sum_probs=9.1
Q ss_pred ccCCCCCCCcc
Q psy1886 105 MPFSLGARNCL 115 (170)
Q Consensus 105 ~~Fg~G~r~C~ 115 (170)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 46999999985
No 38
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=30.22 E-value=49 Score=16.83 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=12.6
Q ss_pred CCCccccCCCCCCCcc
Q psy1886 100 HPNAFMPFSLGARNCL 115 (170)
Q Consensus 100 ~~~~~~~Fg~G~r~C~ 115 (170)
....|+++++..|.|.
T Consensus 16 ~~~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 16 RDNTYQPYDGPRRFCR 31 (31)
T ss_pred CCCcEeCCCCccccCc
Confidence 3467899999888884
No 39
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=26.36 E-value=49 Score=21.08 Aligned_cols=18 Identities=22% Similarity=0.425 Sum_probs=15.2
Q ss_pred HHHHHHHHHHhhccEEee
Q psy1886 122 LQMKVTVSTILRRYKVLV 139 (170)
Q Consensus 122 ~e~~~~l~~ll~~f~~~~ 139 (170)
.-|+-++..+|+-|||.|
T Consensus 60 ~~IrdAVsqVLkGYDWtL 77 (84)
T PF12444_consen 60 VCIRDAVSQVLKGYDWTL 77 (84)
T ss_pred HHHHHHHHHHhccCCcee
Confidence 456788999999999965
No 40
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=26.29 E-value=71 Score=21.75 Aligned_cols=22 Identities=14% Similarity=0.153 Sum_probs=17.4
Q ss_pred CCcccHHHHHHHHHHHHHHHhh
Q psy1886 112 RNCLGYKYAMLQMKVTVSTILR 133 (170)
Q Consensus 112 r~C~G~~la~~e~~~~l~~ll~ 133 (170)
|.|||.-++......++..+-.
T Consensus 5 H~Cpgl~~G~r~~~~a~~~l~~ 26 (131)
T PF02663_consen 5 HLCPGLALGYRMAKYALEELGI 26 (131)
T ss_dssp S--HHHHHHHHHHHHHHHHHTS
T ss_pred CcCccHHHHHHHHHHHHHHcCC
Confidence 7899999999999999888744
No 41
>PRK06789 flagellar motor switch protein; Validated
Probab=23.58 E-value=1.4e+02 Score=18.51 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=28.0
Q ss_pred HHHHHccCCCCCcc-ceeccCCc--eeecCEEeCCCCEEEEe
Q psy1886 31 VIKETMRLYPAVPI-VARSSPEE--LHLCGYTIPAGVTIAVF 69 (170)
Q Consensus 31 ~i~E~lRl~~~~~~-~~r~~~~~--~~~~g~~ip~g~~v~~~ 69 (170)
-++|.+.+.+..-. +-+.+.++ +.++|..|.+|..|..+
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~ 62 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN 62 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence 36788888877543 34555554 55689999999988775
No 42
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=21.58 E-value=49 Score=20.00 Aligned_cols=14 Identities=29% Similarity=0.532 Sum_probs=12.0
Q ss_pred HHHHHHHHHHccCC
Q psy1886 26 DLLNRVIKETMRLY 39 (170)
Q Consensus 26 p~l~~~i~E~lRl~ 39 (170)
-+++.+|+|++|+.
T Consensus 41 ~fv~~~IkEA~RFk 54 (65)
T PF15300_consen 41 QFVEMIIKEAARFK 54 (65)
T ss_pred HHHHHHHHHHHHHH
Confidence 57999999999963
Done!