RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1886
(170 letters)
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 140 bits (353), Expect = 1e-40
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 2 YNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIP 61
EI A+L N PTY+ + +++ L+ V+ ET+RL+P + R +++ + G IP
Sbjct: 305 QEEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIP 362
Query: 62 AGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAM 121
GV + + Y LHR P++W PE+F P+RF P + PF G RNC+G ++A+
Sbjct: 363 KGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFAL 422
Query: 122 LQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEPR 170
+ MK+ + +L+ + +T ++ G L+ +K+E R
Sbjct: 423 MNMKLALIRVLQNFSFKPCK--ETQIPLKLSLGGLLQPEKPVVLKVESR 469
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 135 bits (340), Expect = 7e-39
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Query: 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPI-VARSSPEELHLCGYT 59
V EI I+G + P+++ K+ V+ E +R VP+ + ++ E+ + GY+
Sbjct: 297 VQKEIDLIMGPNGK--PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 354
Query: 60 IPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKY 119
IP G T+ +Y +H ++W +PE F+P+RFL S A +PFSLG R+CLG
Sbjct: 355 IPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHL 414
Query: 120 AMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEPR 170
A ++M + + +L+R+ + + + D++ + G+TL+ P I E R
Sbjct: 415 ARMEMFLFFTALLQRFHLHFPH--ELVPDLKPRLGMTLQPQPYL-ICAERR 462
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 124 bits (311), Expect = 1e-34
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 1 VYNEIQAILGNDPDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVAR-SSPEELHLCGYT 59
V EI+ ++G+ P + K+ + VI E RL +P + ++ GY
Sbjct: 297 VQKEIEQVIGSHRP--PALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 354
Query: 60 IPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKY 119
IP + + P+++ P FNP FL + + + FMPFSLG R CLG
Sbjct: 355 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGI 414
Query: 120 AMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEPR 170
A ++ + +TIL+ + + + ++ + G+ P I+ R
Sbjct: 415 ARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFLAR 464
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 105 bits (263), Expect = 5e-28
Identities = 34/159 (21%), Positives = 66/159 (41%), Gaps = 2/159 (1%)
Query: 13 PDKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSP-EELHLCGYTIPAGVTIAVFIY 71
++ P + + + V+ E R +P + ++ Y IP G TI + +
Sbjct: 308 RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLT 367
Query: 72 GLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTI 131
+ + +PNPE F+P FL + + FMPFS G R C+G A +++ + +++I
Sbjct: 368 SVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSI 427
Query: 132 LRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEPR 170
L+ + + K ++ G + P
Sbjct: 428 LQNFNLKSLVDPKNLDTTPVVNGFASVPPF-YQLCFIPI 465
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 100 bits (250), Expect = 3e-26
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 14 DKVPTYEQLQKLDLLNRVIKETMRLYPAVPIVARSSPEELHLCG-YTIPAGVTIAVFIYG 72
D VP+Y+Q+++L + V+ E +RL+P P + + E+ L G Y + G + V I
Sbjct: 298 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 357
Query: 73 LHRHPQHW-PNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTI 131
LHR W + E+F P+RF S +AF PF G R C+G ++A+ + + + +
Sbjct: 358 LHRDKTIWGDDVEEFRPERFE--NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMM 415
Query: 132 LRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEPR 170
L+ + ++ + LTLK +K + +
Sbjct: 416 LKHFDFEDHTN----YELDIKETLTLKPEGFV-VKAKSK 449
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 94.2 bits (232), Expect = 1e-23
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 51 EELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFL-PSESSKRHPNAFMPFSL 109
E + G+ I G +A +R P+ +P+P F P R+ P + + ++PF
Sbjct: 326 GEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGA 385
Query: 110 GARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEP 169
G C+G +A++Q+K S +LR Y+ + + ++ ++
Sbjct: 386 GRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQ--PPESYRNDHSKMVVQLAQPAAVRYRR 443
Query: 170 R 170
R
Sbjct: 444 R 444
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 88.7 bits (218), Expect = 7e-22
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 56 CGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCL 115
G I G I + +R + + NP++F+ RF PN + F GA CL
Sbjct: 328 RGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF---------PNRHLGFGWGAHMCL 378
Query: 116 GYKYAMLQMKVTVSTILRRYKVL 138
G A L+MK+ +L + K +
Sbjct: 379 GQHLAKLEMKIFFEELLPKLKSV 401
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 86.2 bits (212), Expect = 5e-21
Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 13/148 (8%)
Query: 28 LNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFN 87
++E R YP P + ++ G ++ + +YG + P+ W +P++F
Sbjct: 271 REMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 330
Query: 88 PDRFLPSESSKRHPNAFMPFSLG----ARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRC 143
P+RF + + +P G C G + MK ++ ++ + + V +
Sbjct: 331 PERFAE---REENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPE-- 385
Query: 144 KTMEDIRFQF-GLTLKTLPGNDIKLEPR 170
+ + + + G + R
Sbjct: 386 ---QSLHYSLARMPSLPESGFVMSGIRR 410
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 86.0 bits (211), Expect = 7e-21
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 11/122 (9%)
Query: 47 RSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMP 106
+ + G TI G I +RHP + + F+ R +
Sbjct: 290 YAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT---------VKEHLA 340
Query: 107 FSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIK 166
F G CLG A +++ + + ++ R+ L E++ L +
Sbjct: 341 FGHGVHFCLGAPLARMEVTLALESLFGRFPDL--RLADPAEELPPVPSLISNGHQRLPVL 398
Query: 167 LE 168
L
Sbjct: 399 LH 400
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 85.3 bits (209), Expect = 1e-20
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 11/133 (8%)
Query: 36 MRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSE 95
+R R + EE+ + G IP T+ V +R P+ +P+P +F+ R
Sbjct: 280 LRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRD---- 335
Query: 96 SSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGL 155
+ F G C+G A L+ +V + + R+ L +D+ ++ L
Sbjct: 336 -----TRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL--SLGIDADDVVWRRSL 388
Query: 156 TLKTLPGNDIKLE 168
L+ + ++L+
Sbjct: 389 LLRGIDHLPVRLD 401
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 84.1 bits (206), Expect = 3e-20
Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 36 MRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSE 95
L R + E+L L G I G ++ + +R P P+ ++ + R
Sbjct: 274 RYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR----- 328
Query: 96 SSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGL 155
P + F G +CLG A L+++ + + RR+ L +D F+
Sbjct: 329 ----EPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPAL--RLADPAQDTEFRLTT 382
Query: 156 T---LKTLP 161
L L
Sbjct: 383 PAYGLTELM 391
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 82.2 bits (201), Expect = 2e-19
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 47 RSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMP 106
R++ E++ + + A I +R + + NP++FN +R P P +
Sbjct: 288 RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-------PQDPLG 340
Query: 107 FSLGARNCLGYKYAMLQMKVTVSTILRRYKVL 138
F G C+ A ++ ST+ +++ L
Sbjct: 341 FGFGDHRCIAEHLAKAELTTVFSTLYQKFPDL 372
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 81.4 bits (199), Expect = 3e-19
Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 11/136 (8%)
Query: 36 MRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHW-PNPEQFNPDRFLPS 94
P ++ R + E++ + IPAG + V L R + P ++F+ R
Sbjct: 277 RFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRT--- 333
Query: 95 ESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFG 154
N + F G C G + ++ V + + R+ L D ++R +
Sbjct: 334 -----SGNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHL--DLAVPAAELRNKPV 386
Query: 155 LTLKTLPGNDIKLEPR 170
+T L ++L
Sbjct: 387 VTQNDLFELPVRLAHH 402
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 79.4 bits (194), Expect = 1e-18
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 74 HRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILR 133
H+P+ E F P+RFL + PF LG R CLG +A+L+ + + R
Sbjct: 298 VTQRLHFPDGEAFRPERFLEER--GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFR 355
Query: 134 RYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEPR 170
R+++ + R +TL+ P + PR
Sbjct: 356 RFRL------DPLPFPRVLAQVTLR--PEGGLPARPR 384
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 78.6 bits (192), Expect = 2e-18
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 13/133 (9%)
Query: 31 VIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDR 90
V + L P R + +++ + G I AG + I +R P+P+ + +R
Sbjct: 279 VNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR 338
Query: 91 FLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIR 150
+ + F G C+G A +++ T+ RR+ L +E+++
Sbjct: 339 A---------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGL--RLAVPIEEVK 387
Query: 151 FQFGLT--LKTLP 161
++ +P
Sbjct: 388 YRSAFVDCPDQVP 400
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 77.6 bits (189), Expect = 6e-18
Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 56 CGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCL 115
CG +I G + + I R + P+ F+ R +A + + G C
Sbjct: 301 CGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCP 351
Query: 116 GYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTLKTLPGNDIKLEP 169
G A L+ ++ V TI RR+ + K E F + + + ++ L+P
Sbjct: 352 GVSLARLEAEIAVGTIFRRFPEM-----KLKETPVFGYHPAFRNIESLNVILKP 400
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 76.8 bits (187), Expect = 1e-17
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 54 HLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARN 113
+ G I AG + V +R P+ +P+P++ + +R PN + F G
Sbjct: 295 EIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER---------SPNPHVSFGFGPHY 345
Query: 114 CLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLT---LKTLP 161
C G A L+ ++ V +L R L ED+ F+ G + LP
Sbjct: 346 CPGGMLARLESELLVDAVLDRVPGL--KLAVAPEDVPFKKGALIRGPEALP 394
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 75.6 bits (184), Expect = 2e-17
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 26 DLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQ 85
+ ++E +R P V R + E++ + I G + V+I +R + + +P+
Sbjct: 238 KGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDS 297
Query: 86 FNPDRFLPSESSKRHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVLVGDRCKT 145
F PDR PN + F G CLG A L+ ++ + ++++V
Sbjct: 298 FIPDR---------TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVK---EIVK 345
Query: 146 MEDIRFQFGLTLKTLP 161
E I + + L
Sbjct: 346 KEKIDNEVLNGYRKLV 361
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 74.4 bits (181), Expect = 7e-17
Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 54 HLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARN 113
+ + G + V + G + P+H+PNP DR +P + + F G
Sbjct: 292 QVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRP--------NPTSHLAFGRGQHF 343
Query: 114 CLGYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLTL---KTLP 161
C G ++ + +L++ + D ++ + ++ + LP
Sbjct: 344 CPGSALGRRHAQIGIEALLKKMPGV--DLAVPIDQLVWRTRFQRRIPERLP 392
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 71.7 bits (174), Expect = 6e-16
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 17/117 (14%)
Query: 56 CGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKRHPNAFMPFSLGARNCL 115
G + G I + + P + R + F G+ CL
Sbjct: 298 HGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR---------QKVSHTTFGHGSHLCL 348
Query: 116 GYKYAMLQMKVTVSTILRRYKVLVGDRCKTMEDIRFQFGLT--LKTLPGNDIKLEPR 170
G A ++ VT+ L R I+ + G+ ++ LP + +P
Sbjct: 349 GQHLARREIIVTLKEWLTRIPDF---SIAPGAQIQHKSGIVSGVQALP---LVWDPA 399
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 71.4 bits (173), Expect = 7e-16
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 39 YPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSK 98
P V R + E + L TI G + V+I +R + + + E+F PDR
Sbjct: 251 SPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR-------- 302
Query: 99 RHPNAFMPFSLGARNCLGYKYAMLQMKVTVSTILRRYKVL 138
+PN + F G CLG A L+ ++ + +R++ +
Sbjct: 303 -NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHI 341
>d1mpxa1 b.18.1.13 (A:405-637) Alpha-amino acid ester hydrolase
{Xanthomonas citri [TaxId: 346]}
Length = 233
Score = 31.7 bits (71), Expect = 0.028
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 52 ELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKR 99
L +T G + V + P + NP+ + P+ F +
Sbjct: 166 GLPTANHTFQPGHRVMVQVQS-SLFPLYDRNPQTYVPNIFFAKPGDYQ 212
>d2b9va1 b.18.1.13 (A:435-666) Alpha-amino acid ester hydrolase
{Acetobacter pasteurianus [TaxId: 438]}
Length = 232
Score = 28.9 bits (64), Expect = 0.22
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 52 ELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPEQFNPDRFLPSESSKR 99
L + G I V I P + NP++F P+ F +
Sbjct: 164 TLPAVNHVFAKGHRIMVQIQS-SWFPLYDRNPQKFVPNIFDAKPADYT 210
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate
carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 363
Score = 28.7 bits (64), Expect = 0.33
Identities = 8/28 (28%), Positives = 10/28 (35%)
Query: 61 PAGVTIAVFIYGLHRHPQHWPNPEQFNP 88
P GV I I+G R E +
Sbjct: 164 PEGVPIEGIIFGGRRPAGVPLVYEALSW 191
>d1lnsa2 b.18.1.13 (A:551-763) X-Prolyl dipeptidyl aminopeptidase
PepX {Lactococcus lactis [TaxId: 1358]}
Length = 213
Score = 26.5 bits (58), Expect = 1.5
Identities = 8/61 (13%), Positives = 17/61 (27%), Gaps = 4/61 (6%)
Query: 25 LDLLNRVIKETMRLYPAVPIVARSSPEELHLCGYTIPAGVTIAVFIYGLHRHPQHWPNPE 84
+L N+ + L + EL Y + + V +Y +
Sbjct: 136 TNLQNQSLLTVSDLKADEWFTIKF---ELQPTIYHLEKADKLRVILYS-TDFEHTVRDNR 191
Query: 85 Q 85
+
Sbjct: 192 K 192
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima
[TaxId: 2336]}
Length = 87
Score = 25.5 bits (56), Expect = 1.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 131 ILRRYKVLVGDRCKTMEDIRFQFGLT 156
+LR L+ + KT+E++ F +T
Sbjct: 26 VLRMRYGLLDGKPKTLEEVGQYFNVT 51
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli
[TaxId: 562]}
Length = 68
Score = 24.7 bits (54), Expect = 2.0
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 131 ILRRYKVLVGDRCKTMEDIRFQFGLT 156
+LR + + T+E++ QF +T
Sbjct: 13 VLRMRFGIDMNTDYTLEEVGKQFDVT 38
>d3bp8c1 d.95.1.1 (C:13-87) Glucose permease domain IIB
{Escherichia coli [TaxId: 562]}
Length = 75
Score = 23.9 bits (52), Expect = 4.2
Identities = 5/23 (21%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Query: 3 NEIQAILGNDPDKVPTYEQLQKL 25
+ +QAI G D + ++ +
Sbjct: 53 SGVQAIFGTKSDNL--KTEMDEY 73
>d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin
oxidoreductase {Archaeon Pyrococcus furiosus [TaxId:
2261]}
Length = 409
Score = 24.9 bits (54), Expect = 6.4
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Query: 7 AILGNDPDKVPTYEQLQKLDL------LNRVIK 33
I G D +P E L++LDL L +V
Sbjct: 375 RIRGWDERGIPKKETLKELDLDFVIPELEKVTN 407
Score = 24.6 bits (53), Expect = 8.7
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 59 TIPAGVTIAVFIY----GLHRHPQHWPNPEQF 86
TI GV+IA + G+ + + + +
Sbjct: 129 TISLGVSIAHVMEAVERGILKEGPTFGDFKGA 160
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus
[TaxId: 271]}
Length = 61
Score = 22.7 bits (49), Expect = 8.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 131 ILRRYKVLVGDRCKTMEDIRFQFGLT 156
+L+ K L+ R T+E++ FG+T
Sbjct: 16 VLKMRKGLIDGREHTLEEVGAYFGVT 41
>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 107
Score = 23.8 bits (51), Expect = 8.8
Identities = 5/17 (29%), Positives = 7/17 (41%)
Query: 76 HPQHWPNPEQFNPDRFL 92
H + PE F + L
Sbjct: 20 HSSLFREPELFVGESVL 36
>d1aora1 a.110.1.1 (A:211-605) Aldehyde ferredoxin oxidoreductase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 395
Score = 24.5 bits (53), Expect = 9.4
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 7 AILGNDPDKVPTYEQLQKLDL 27
+ G D E+L++L +
Sbjct: 371 KLRGWTEDGKIPKEKLEELGI 391
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.140 0.431
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 685,026
Number of extensions: 32483
Number of successful extensions: 123
Number of sequences better than 10.0: 1
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 34
Length of query: 170
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 91
Effective length of database: 1,322,926
Effective search space: 120386266
Effective search space used: 120386266
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)