BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1888
(386 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5FVJ0|RUFY3_RAT Protein RUFY3 OS=Rattus norvegicus GN=Rufy3 PE=1 SV=1
Length = 469
Score = 354 bits (909), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 188/417 (45%), Positives = 272/417 (65%), Gaps = 55/417 (13%)
Query: 5 ELTGGAQDTIYLCNFRVSVDGEWLCLKQLDDVEVRVRDPPELRSPSPEP----PLFVARN 60
++T A +TIYLC FRVS+DGEWLCL++LDD+ + +P PEP P ++ N
Sbjct: 17 KITQAAMETIYLCKFRVSMDGEWLCLRELDDISL---------TPDPEPTHEDPNYLMAN 67
Query: 61 PVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLL 120
ER NL+N++KL +K LIE++ GR LDSD+ PLQ FF+V+EH L+HGLK KK L
Sbjct: 68 ----ERMNLMNMAKLSIKGLIESALNLGRTLDSDYAPLQQFFVVMEHCLKHGLKAKKTFL 123
Query: 121 GPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVL 180
G K W L+LVEKL PEA++ITASV+DLP +KT +GR RAWLRLALMQKKL++Y++ L
Sbjct: 124 GQNKSFWGPLELVEKLVPEAAEITASVKDLPGLKTPVGRGRAWLRLALMQKKLSEYMKAL 183
Query: 181 VDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVIDFSLYL 240
++ + ++L E++E +AL+M +E +I G L+ LNVID N C+K EDLD Q GVIDFS+YL
Sbjct: 184 INKK-ELLSEFYEANALMMEEEGAIIAGLLVGLNVIDANFCMKGEDLDSQVGVIDFSMYL 242
Query: 241 RSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGNLQTQVESLTTTNALMRE 300
+ D S+ + ++ +LDQKNY+EELNRHLNATV NLQ +V++L +N + E
Sbjct: 243 K-----DGNSSKGSEGDGQITAILDQKNYVEELNRHLNATVNNLQAKVDALEKSNTKLTE 297
Query: 301 DLSIAEKNLRILIQENENLKNQ----------------------LANSSQHTS-----NL 333
+L++A + L +E E +K + L+ + +H L
Sbjct: 298 ELAVANNRIITLQEEMERVKEESSYLLESNRKGPKQDRTAEGQALSEARKHLKEETQLRL 357
Query: 334 SVH-----EVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIKMINLEMYKKLQA 385
V ++ ++ EME+AMK+LE+DV +KQD ++ LR+QL+D++ + E+ KLQ+
Sbjct: 358 DVEKELELQISMRQEMELAMKMLEKDVCEKQDALVSLRQQLDDLRALKHELAFKLQS 414
>sp|Q9D394|RUFY3_MOUSE Protein RUFY3 OS=Mus musculus GN=Rufy3 PE=1 SV=1
Length = 469
Score = 354 bits (908), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 189/417 (45%), Positives = 272/417 (65%), Gaps = 55/417 (13%)
Query: 5 ELTGGAQDTIYLCNFRVSVDGEWLCLKQLDDVEVRVRDPPELRSPSPEP----PLFVARN 60
++T A +TIYLC FRVS+DGEWLCL++LDD+ + +P PEP P ++ N
Sbjct: 17 KITQAAMETIYLCKFRVSMDGEWLCLRELDDISL---------TPDPEPTHEDPNYLMAN 67
Query: 61 PVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLL 120
ER NL+N++KL +K LIE++ GR LDSD+ PLQ FF+V+EH L+HGLK KK L
Sbjct: 68 ----ERMNLMNMAKLSIKGLIESALNLGRTLDSDYAPLQQFFVVMEHCLKHGLKAKKTFL 123
Query: 121 GPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVL 180
G K W L+LVEKL PEA++ITASV+DLP +KT +GR RAWLRLALMQKKL++Y++ L
Sbjct: 124 GQNKSFWGPLELVEKLVPEAAEITASVKDLPGLKTPVGRGRAWLRLALMQKKLSEYMKAL 183
Query: 181 VDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVIDFSLYL 240
++ + ++L E++E +AL+M +E +I G L+ LNVID N C+K EDLD Q GVIDFS+YL
Sbjct: 184 INKK-ELLSEFYEVNALMMEEEGAIIAGLLVGLNVIDANFCMKGEDLDSQVGVIDFSMYL 242
Query: 241 RSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGNLQTQVESLTTTNALMRE 300
+ D S+ + ++ +LDQKNY+EELNRHLNATV NLQT+V+ L +N + E
Sbjct: 243 K-----DGNSSKGSEGDGQITAILDQKNYVEELNRHLNATVNNLQTKVDLLEKSNTKLTE 297
Query: 301 DLSIAEKNLRILIQENENLKNQ----------------------LANSSQHTS-----NL 333
+L++A + L +E E +K + L+ + +H L
Sbjct: 298 ELAVANNRIITLQEEMERVKEESSYLLESNRKGPKQDRTAEGQALSEARKHLKEETQLRL 357
Query: 334 SVH-----EVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIKMINLEMYKKLQA 385
V ++ ++ EME+AMK+LE+DV +KQD ++ LR+QL+D++ + E+ KLQ+
Sbjct: 358 DVEKELELQISMRQEMELAMKMLEKDVCEKQDALVSLRQQLDDLRALKHELAFKLQS 414
>sp|Q7L099|RUFY3_HUMAN Protein RUFY3 OS=Homo sapiens GN=RUFY3 PE=1 SV=1
Length = 469
Score = 353 bits (905), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/417 (44%), Positives = 272/417 (65%), Gaps = 55/417 (13%)
Query: 5 ELTGGAQDTIYLCNFRVSVDGEWLCLKQLDDVEVRVRDPPELRSPSPEP----PLFVARN 60
++T A +TIYLC FRVS+DGEWLCL++LDD+ + +P PEP P ++ N
Sbjct: 17 KITQAAMETIYLCKFRVSMDGEWLCLRELDDISL---------TPDPEPTHEDPNYLMAN 67
Query: 61 PVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLL 120
ER NL+N++KL +K LIE++ GR LDSD+ PLQ FF+V+EH L+HGLK KK L
Sbjct: 68 ----ERMNLMNMAKLSIKGLIESALNLGRTLDSDYAPLQQFFVVMEHCLKHGLKAKKTFL 123
Query: 121 GPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVL 180
G K W L+LVEKL PEA++ITASV+DLP +KT +GR RAWLRLALMQKKL++Y++ L
Sbjct: 124 GQNKSFWGPLELVEKLVPEAAEITASVKDLPGLKTPVGRGRAWLRLALMQKKLSEYMKAL 183
Query: 181 VDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVIDFSLYL 240
++ + ++L E++E +AL+M +E +I G L+ LNVID N C+K EDLD Q GVIDFS+YL
Sbjct: 184 INKK-ELLSEFYEPNALMMEEEGAIIAGLLVGLNVIDANFCMKGEDLDSQVGVIDFSMYL 242
Query: 241 RSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGNLQTQVESLTTTNALMRE 300
+ D ++ + ++ +LDQKNY+EELNRHLNATV NLQ +V++L +N + E
Sbjct: 243 K-----DGNSSKGTEGDGQITAILDQKNYVEELNRHLNATVNNLQAKVDALEKSNTKLTE 297
Query: 301 DLSIAEKNLRILIQENENLKNQ----------------------LANSSQHTS-----NL 333
+L++A + L +E E +K + L+ + +H L
Sbjct: 298 ELAVANNRIITLQEEMERVKEESSYILESNRKGPKQDRTAEGQALSEARKHLKEETQLRL 357
Query: 334 SVH-----EVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIKMINLEMYKKLQA 385
V ++ ++ EME+AMK+LE+DV +KQD ++ LR+QL+D++ + E+ KLQ+
Sbjct: 358 DVEKELEMQISMRQEMELAMKMLEKDVCEKQDALVSLRQQLDDLRALKHELAFKLQS 414
>sp|Q5R4V2|RUFY3_PONAB Protein RUFY3 OS=Pongo abelii GN=RUFY3 PE=2 SV=1
Length = 469
Score = 350 bits (898), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 186/417 (44%), Positives = 271/417 (64%), Gaps = 55/417 (13%)
Query: 5 ELTGGAQDTIYLCNFRVSVDGEWLCLKQLDDVEVRVRDPPELRSPSPEP----PLFVARN 60
++T A +TIYLC FRVS+DGEWLCL++LDD+ + +P PEP P ++ N
Sbjct: 17 KITQAAMETIYLCKFRVSMDGEWLCLRELDDISL---------TPDPEPTHEDPNYLMAN 67
Query: 61 PVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLL 120
ER NL+N++KL +K LIE++ GR LDSD+ PLQ FF+V+EH L+HGLK KK L
Sbjct: 68 ----ERMNLMNMAKLSIKGLIESALNLGRTLDSDYAPLQQFFVVMEHCLKHGLKAKKTFL 123
Query: 121 GPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVL 180
G K W L+LVEKL PEA++ITASV+DLP +KT +GR RAWLRLALMQKKL++Y++ L
Sbjct: 124 GQNKSFWGPLELVEKLVPEAAEITASVKDLPGLKTPVGRGRAWLRLALMQKKLSEYMKAL 183
Query: 181 VDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVIDFSLYL 240
++ + ++L E++E +AL+M +E +I G L+ LNVID N C+K EDLD Q GVIDFS+YL
Sbjct: 184 INKK-ELLSEFYEPNALMMEEEGAIIAGLLVGLNVIDANFCMKGEDLDSQVGVIDFSMYL 242
Query: 241 RSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGNLQTQVESLTTTNALMRE 300
+ D ++ + ++ +LDQKNY+EELNRHLNATV NLQ +V++L +N +
Sbjct: 243 K-----DGNSSKGTEGDGQITAILDQKNYVEELNRHLNATVNNLQAKVDALEKSNTKLTG 297
Query: 301 DLSIAEKNLRILIQENENLKNQ----------------------LANSSQHTS-----NL 333
+L++A + L +E E +K + L+ + +H L
Sbjct: 298 ELAVANNRIITLQEEMERVKEESSYILESNRKGPKQDRTAEGQALSEARKHLKEETQLRL 357
Query: 334 SVH-----EVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIKMINLEMYKKLQA 385
V ++ ++ EME+AMK+LE+DV +KQD ++ LR+QL+D++ + E+ KLQ+
Sbjct: 358 DVEKELEMQISMRQEMELAMKMLEKDVCEKQDALVSLRQQLDDLRALKHELAFKLQS 414
>sp|Q8R4C2|RUFY2_MOUSE RUN and FYVE domain-containing protein 2 OS=Mus musculus GN=Rufy2
PE=1 SV=2
Length = 606
Score = 325 bits (832), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 180/379 (47%), Positives = 247/379 (65%), Gaps = 58/379 (15%)
Query: 56 FVARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKP 115
++P +ER NL+N++KL +K LIE++ GR LDSD+ PLQ FF+V+EH L+HGLK
Sbjct: 1 MATKDPTAVERANLLNMAKLSIKGLIESALSFGRTLDSDYPPLQQFFVVMEHCLKHGLKG 60
Query: 116 KKGLLGPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLAD 175
+K L K +W L+LVEKL PEA +I ASVRDLP +KT +GRARAWLRLALMQKK+AD
Sbjct: 61 RKSFLSYNKTIWGPLELVEKLYPEAEEIGASVRDLPGLKTPLGRARAWLRLALMQKKMAD 120
Query: 176 YLQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVID 235
YL+ L+ R ++L E++E AL+M +E VI+G L+ LNVID NLCVK EDLD Q GVID
Sbjct: 121 YLRCLIIQR-ELLSEFYEYHALMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSQVGVID 179
Query: 236 FSLYLRSACYHDHPEEVTSQVEDNMSL--VLDQKNYIEELNRHLNATVGNLQTQVESLTT 293
FS+YL++ EE E N+ + +LDQKNY+EELNR LN+TV +L ++V+SL
Sbjct: 180 FSMYLKN-------EEEIGNKERNVQIAAILDQKNYVEELNRQLNSTVSSLHSRVDSLEK 232
Query: 294 TNALMREDLSIAEKNLRILIQENENLKNQ----LANSSQH-------------------- 329
+N + E+L+IA+ N+ L +EN L+++ L + QH
Sbjct: 233 SNTKLIEELAIAKNNIIKLQEENHQLRSENELILMRTRQHLEVTKVDVETELQTYKHSRQ 292
Query: 330 -----------------------TSNLSVHEVGLKAEMEVAMKLLERDVHQKQDTIIELR 366
+ LSV +VG+K EME+AMKLLE+D+H+KQDT+I LR
Sbjct: 293 GLDEMYNDARRQLRDESQLRQDVENELSV-QVGMKHEMELAMKLLEKDIHEKQDTLIGLR 351
Query: 367 RQLEDIKMINLEMYKKLQA 385
+QLE++K IN+EMY++LQ
Sbjct: 352 QQLEEVKAINIEMYQRLQG 370
>sp|Q5R5R4|RUFY2_PONAB RUN and FYVE domain-containing protein 2 OS=Pongo abelii GN=RUFY2
PE=2 SV=1
Length = 606
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/378 (47%), Positives = 243/378 (64%), Gaps = 56/378 (14%)
Query: 56 FVARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKP 115
++P +ER NL+N++KL +K LIE++ GR LDSD+ PLQ FF+V+EH L+HGLK
Sbjct: 1 MATKDPTAVERANLLNMAKLSIKGLIESALSFGRTLDSDYPPLQQFFVVMEHCLKHGLKV 60
Query: 116 KKGLLGPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLAD 175
+K L K +W L+LVEKL PEA +I ASVRDLP +KT +GRARAWLRLALMQKK+AD
Sbjct: 61 RKSFLSYNKTIWGPLELVEKLYPEAEEIGASVRDLPGLKTPLGRARAWLRLALMQKKMAD 120
Query: 176 YLQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVID 235
YL+ L+ R D+L E++E AL+M +E VI+G L+ LNVID NLCVK EDLD Q GVID
Sbjct: 121 YLRCLIIQR-DLLSEFYEYHALMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSQVGVID 179
Query: 236 FSLYLRSACYHDHPEEVTSQVEDNMSL--VLDQKNYIEELNRHLNATVGNLQTQVESLTT 293
FS+YL++ EE E N+ + +LDQKNY+EELNR LN+TV +L ++V+SL
Sbjct: 180 FSMYLKN-------EEDIGNKERNVQIAAILDQKNYVEELNRQLNSTVSSLHSRVDSLEK 232
Query: 294 TNALMREDLSIAEKNLRILIQENENLKNQ----LANSSQHTSNLSVH------------- 336
+N + E+L+IA+ N+ L +EN L+N+ L + QH V
Sbjct: 233 SNTKLIEELAIAKNNIIKLQEENHQLRNENKLILMKTQQHIEVTKVDVETELQTYKHSRQ 292
Query: 337 -----------------------------EVGLKAEMEVAMKLLERDVHQKQDTIIELRR 367
+V +K E+E+AMKLLE+D+H+KQDT+I LR+
Sbjct: 293 GLDEMYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEKDIHEKQDTLIGLRQ 352
Query: 368 QLEDIKMINLEMYKKLQA 385
QLE++K IN+EMY+KLQ
Sbjct: 353 QLEEVKAINIEMYQKLQG 370
>sp|Q8WXA3|RUFY2_HUMAN RUN and FYVE domain-containing protein 2 OS=Homo sapiens GN=RUFY2
PE=1 SV=2
Length = 655
Score = 321 bits (823), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 178/377 (47%), Positives = 243/377 (64%), Gaps = 56/377 (14%)
Query: 57 VARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPK 116
++P +ER NL+N++KL +K LIE++ GR LDSD+ PLQ FF+V+EH L+HGLK +
Sbjct: 51 ATKDPTAVERANLLNMAKLSIKGLIESALSFGRTLDSDYPPLQQFFVVMEHCLKHGLKVR 110
Query: 117 KGLLGPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADY 176
K L K +W L+LVEKL PEA +I ASVRDLP +KT +GRARAWLRLALMQKK+ADY
Sbjct: 111 KSFLSYNKTIWGPLELVEKLYPEAEEIGASVRDLPGLKTPLGRARAWLRLALMQKKMADY 170
Query: 177 LQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVIDF 236
L+ L+ R D+L E++E AL+M +E VI+G L+ LNVID NLCVK EDLD Q GVIDF
Sbjct: 171 LRCLIIQR-DLLSEFYEYHALMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSQVGVIDF 229
Query: 237 SLYLRSACYHDHPEEVTSQVEDNMSL--VLDQKNYIEELNRHLNATVGNLQTQVESLTTT 294
S+YL++ EE E N+ + +LDQKNY+EELNR LN+TV +L ++V+SL +
Sbjct: 230 SMYLKN-------EEDIGNKERNVQIAAILDQKNYVEELNRQLNSTVSSLHSRVDSLEKS 282
Query: 295 NALMREDLSIAEKNLRILIQENENLKNQ----LANSSQH--------------------- 329
N + E+L+IA+ N+ L +EN L+++ L + QH
Sbjct: 283 NTKLIEELAIAKNNIIKLQEENHQLRSENKLILMKTQQHLEVTKVDVETELQTYKHSRQG 342
Query: 330 ---------------------TSNLSVHEVGLKAEMEVAMKLLERDVHQKQDTIIELRRQ 368
N +V +K E+E+AMKLLE+D+H+KQDT+I LR+Q
Sbjct: 343 LDEMYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEKDIHEKQDTLIGLRQQ 402
Query: 369 LEDIKMINLEMYKKLQA 385
LE++K IN+EMY+KLQ
Sbjct: 403 LEEVKAINIEMYQKLQG 419
>sp|Q8BIJ7|RUFY1_MOUSE RUN and FYVE domain-containing protein 1 OS=Mus musculus GN=Rufy1
PE=1 SV=1
Length = 712
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 239/374 (63%), Gaps = 52/374 (13%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
++ ++ ER NL+++ KL +K L++++ GR LD+D+ PLQ FF+V+EH L+HGLK KK
Sbjct: 109 SKGQMMEERANLMHMMKLSIKVLLQSALSLGRSLDADYAPLQQFFVVMEHCLKHGLKVKK 168
Query: 118 GLLGPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYL 177
+G K + L+LVEKL PEASDI SVR+LP +KT +GR RAWL LALMQKKLADYL
Sbjct: 169 SFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRAWLYLALMQKKLADYL 228
Query: 178 QVLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVIDFS 237
+VL+D++ +L E++E +AL+M +E +VI+G L+ LNV+D NLC+K EDLD Q GVIDFS
Sbjct: 229 KVLIDNK-QLLSEFYEPEALMMEEEGMVIVGLLVGLNVLDANLCLKGEDLDSQVGVIDFS 287
Query: 238 LYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGNLQTQVESLTTTNAL 297
L L+ A D E + ++ VLDQKNY+EELNRHL+ TVG+LQT+++ L TN+
Sbjct: 288 LCLKDAQDLDSGRE-----HERITDVLDQKNYVEELNRHLSCTVGDLQTKIDGLEKTNSK 342
Query: 298 MREDLSIAEKNLRILIQENENLKNQ----------------------LANSSQHTSNL-- 333
++E+LS A + L +E + L+ Q L Q L
Sbjct: 343 LQEELSAATDRICSLQKEQQQLREQNEVIRERSEKSVEITKQDTKVELETYKQTRQGLDE 402
Query: 334 ----------------------SVHEVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLED 371
++G+K EME+AMKLLE+D H+KQDT++ LR+QLE+
Sbjct: 403 MYSDVWKQLKEEKKVRLELEKELELQIGMKTEMEIAMKLLEKDTHEKQDTLVALRQQLEE 462
Query: 372 IKMINLEMYKKLQA 385
+K INL+M+ K+Q+
Sbjct: 463 VKAINLQMFHKVQS 476
>sp|Q96T51|RUFY1_HUMAN RUN and FYVE domain-containing protein 1 OS=Homo sapiens GN=RUFY1
PE=1 SV=2
Length = 708
Score = 305 bits (780), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/374 (45%), Positives = 240/374 (64%), Gaps = 52/374 (13%)
Query: 57 VARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPK 116
++ ++ ER NL+++ KL +K L++++ GR LD+DH PLQ FF+V+EH L+HGLK K
Sbjct: 104 ASKCQMMEERANLMHMMKLSIKVLLQSALSLGRSLDADHAPLQQFFVVMEHCLKHGLKVK 163
Query: 117 KGLLGPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADY 176
K +G K + L+LVEKL PEASDI SVR+LP +KT +GR RAWL LALMQKKLADY
Sbjct: 164 KSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRAWLYLALMQKKLADY 223
Query: 177 LQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQGVIDF 236
L+VL+D++ +L E++E +AL+M +E +VI+G L+ LNV+D NLC+K EDLD Q GVIDF
Sbjct: 224 LKVLIDNK-HLLSEFYEPEALMMEEEGMVIVGLLVGLNVLDANLCLKGEDLDSQVGVIDF 282
Query: 237 SLYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGNLQTQVESLTTTNA 296
SLYL+ D +E + ++ VLDQKNY+EELNRHL+ TVG+LQT+++ L TN+
Sbjct: 283 SLYLKDVQDLDGGKE-----HERITDVLDQKNYVEELNRHLSCTVGDLQTKIDGLEKTNS 337
Query: 297 LMREDLSIA-------------------------EKNLRILIQEN----ENLKNQLANSS 327
++E+LS A EK++ I Q+ E K
Sbjct: 338 KLQEELSAATDRICSLQEEQQQLREQNELIRERSEKSVEITKQDTKVELETYKQTRQGLD 397
Query: 328 QHTSNL-----------------SVHEVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLE 370
+ S++ ++G+K EME+AMKLLE+D H+KQDT++ LR+QLE
Sbjct: 398 EMYSDVWKQLKEEKKVRLELEKELELQIGMKTEMEIAMKLLEKDTHEKQDTLVALRQQLE 457
Query: 371 DIKMINLEMYKKLQ 384
++K INL+M+ K Q
Sbjct: 458 EVKAINLQMFHKAQ 471
>sp|A7YDW0|RUN3A_DANRE RUN domain-containing protein 3A OS=Danio rerio GN=rundc3a PE=2
SV=1
Length = 428
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 40/266 (15%)
Query: 62 VIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLLG 121
+ +ER+NL+ + + VK L+E + +D +F +LEH+L H K
Sbjct: 24 IAVERKNLITVCRFSVKTLLE--KYTAEPIDDSSEEFINFAAILEHILSHRFKGSGSWFD 81
Query: 122 PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQ-VL 180
++ WD ++L P ++ +S+ ++ + + + RAWLR+ALM+K+L++Y+ L
Sbjct: 82 GQRSFWDFIRLACSKVP--NNCISSIENMENINSSRAKGRAWLRVALMEKRLSEYIATAL 139
Query: 181 VDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQ-QGVIDFSLY 239
D R +++ A+++ +EA V+ G L+ L ID + C+K E LD + + VID++ Y
Sbjct: 140 RDSR--TTRRFYDEGAIMLREEATVLTGMLIGLGAIDFSFCLKGEALDGKSEAVIDYTPY 197
Query: 240 LRSACYHD---------------------HP-------EEV----TSQVEDNMSLVLDQK 267
L+ +D HP EE ++E +V QK
Sbjct: 198 LKFTQSYDYLSDDEDGQSVDSSNSDDSVEHPYIPLVTDEESWRNKCRKMEQRFKIVNAQK 257
Query: 268 NYIEELNRHLNATVGNLQTQVESLTT 293
Y+EEL R + + N++ + + LT
Sbjct: 258 GYLEELVRLRESQLKNVEMENKKLTA 283
>sp|O08576|RUN3A_MOUSE RUN domain-containing protein 3A OS=Mus musculus GN=Rundc3a PE=1
SV=1
Length = 446
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 145/290 (50%), Gaps = 41/290 (14%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
+RN VI+ERRNL+ + + VK L+E + +D +F +LE +L H K
Sbjct: 21 SRN-VIVERRNLITVCRFSVKTLLE--KYTAEPIDDSSEEFVNFAAILEQILSHRFK-AC 76
Query: 118 GLLGP--------KKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALM 169
GP ++ WD ++L P ++ +S+ ++ + T + RAW+R+ALM
Sbjct: 77 APAGPASWFSSDGQRGFWDYIRLACSKVP--NNCVSSIENMENISTARAKGRAWIRVALM 134
Query: 170 QKKLADYLQ-VLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLD 228
+K++++Y+ L D+R ++++ A+++ +EA V+ G L+ L+ ID + C+K E LD
Sbjct: 135 EKRMSEYITTALRDNR--TTRRFYDSGAIMLREEATVLTGMLIGLSAIDFSFCLKGEVLD 192
Query: 229 CQQG-VIDFSLYLRSACYHD--------HPEEVTSQVEDN------MSLVLDQKNYIEEL 273
+ VID++ YL+ +D H E +S EDN + LV D+ ++ +
Sbjct: 193 GKTPVVIDYTPYLKFTQSYDYLTDEEERHSAE-SSTSEDNSPEHPYLPLVTDEDSWYNKW 251
Query: 274 NRHLNATVGNLQTQVESLTTTNALMREDLSIAEKNLRILIQENENLKNQL 323
++ ++ + + + E + + E L+ L EN L+ QL
Sbjct: 252 HK--------MEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL 293
>sp|Q5NVC2|RUN3B_PONAB RUN domain-containing protein 3B OS=Pongo abelii GN=RUNDC3B PE=2
SV=1
Length = 456
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 45/256 (17%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
ARN + ERRNL+ + + VK LI+ S +D +F +LE +L H LK +
Sbjct: 26 ARNAAV-ERRNLITVCRFSVKTLIDRSCFE--TIDDSSPEFNNFAAILEQILSHRLKGQV 82
Query: 118 GLLG--PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLAD 175
G + WD +++ + + S+ ++ V + + RAW+R+ALM+K L++
Sbjct: 83 TWFGYESPRSFWDYIRVA--CRKVSQNCICSIENMENVSSSRAKGRAWIRVALMEKHLSE 140
Query: 176 YLQVLVDHRD-DILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQ-QGV 233
Y+ + RD ++E A+++ +EA ++ G LL LN ID + C+K E LD V
Sbjct: 141 YISTAL--RDFKTTRRFYEDGAIVLGEEANMLAGMLLGLNAIDFSFCLKGEGLDGSFPAV 198
Query: 234 IDFSLYLR--------------------SACYHDHPEEV--------------TSQVEDN 259
ID++ YL+ S PE V +V+
Sbjct: 199 IDYTPYLKYIQGSDSISSDEEELRTLGSSGSESSTPENVGPPFLMDENSWFNKCKRVKQK 258
Query: 260 MSLVLDQKNYIEELNR 275
L L+QK Y+EEL R
Sbjct: 259 YQLTLEQKGYLEELLR 274
>sp|Q17QK1|RUN3A_BOVIN RUN domain-containing protein 3A OS=Bos taurus GN=RUNDC3A PE=2 SV=1
Length = 441
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 141/284 (49%), Gaps = 34/284 (11%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
+RN V +ERRNL+ + + VK L+E + +D +F +LE +L H K
Sbjct: 21 SRN-VAVERRNLITVCRFSVKTLLE--KYTTEPIDDSSEEFVNFAAILEQILSHRFKGPV 77
Query: 118 GLLGP--KKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLAD 175
++ WD ++L P ++ +S+ ++ + T + RAW+R+ALM+K++++
Sbjct: 78 SWFSSDGQRGFWDYIRLACSKVP--NNCVSSIENMENISTARAKGRAWIRVALMEKRMSE 135
Query: 176 YLQ-VLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQG-V 233
Y+ L D R ++++ A++M +EA V+ G L+ L+ ID + C+K E LD + V
Sbjct: 136 YITTALRDTR--TTRRFYDSGAIMMREEATVLTGMLIGLSAIDFSFCLKGEVLDGKTPVV 193
Query: 234 IDFSLYLRSACYHD--------HPEEVTSQVEDN------MSLVLDQKNYIEELNRHLNA 279
ID++ YL+ +D H E +S EDN + LV D+ ++ + ++
Sbjct: 194 IDYTPYLKFTQSYDYLTDEEERHSAE-SSTSEDNSPEHPYLPLVTDEDSWYSKWHK---- 248
Query: 280 TVGNLQTQVESLTTTNALMREDLSIAEKNLRILIQENENLKNQL 323
++ + + + E + + E L+ L EN L+ QL
Sbjct: 249 ----MEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL 288
>sp|Q3B7K9|RUN3B_RAT RUN domain-containing protein 3B OS=Rattus norvegicus GN=Rundc3b
PE=2 SV=1
Length = 403
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 45/256 (17%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
ARN + ERRNL+ + + VK LI+ S +D +F VLE +L H LK +
Sbjct: 22 ARNAAV-ERRNLITVCRFSVKTLIDRSCFE--TIDDSSPEFNNFAAVLEQILSHRLKGQV 78
Query: 118 GLLG--PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLAD 175
G + WD +++ + + S+ ++ V + + RAW+R+ALM+K L++
Sbjct: 79 TWFGYESPRSFWDYIRVA--CRKVSQNCICSIENMENVSSSRAKGRAWIRVALMEKHLSE 136
Query: 176 YLQVLVDHRD-DILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQ-QGV 233
Y+ + RD ++E A+++ +EA ++ G LL LN ID + C+K E LD V
Sbjct: 137 YISTAL--RDFKTTRRFYEEGAIVLGEEANMLAGMLLGLNAIDFSFCLKGEGLDGTFPAV 194
Query: 234 IDFSLYLR--------------------SACYHDHPEEV--------------TSQVEDN 259
ID++ YL+ S PE V +V
Sbjct: 195 IDYTPYLKFEQSSDSISSDEEELRTFGSSDSEGSTPENVGPPLILDENSWFNKCKRVRQK 254
Query: 260 MSLVLDQKNYIEELNR 275
L L+QK Y+EEL R
Sbjct: 255 YQLTLEQKGYLEELLR 270
>sp|Q6PDC0|RUN3B_MOUSE RUN domain-containing protein 3B OS=Mus musculus GN=Rundc3b PE=2
SV=1
Length = 408
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 45/256 (17%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
ARN + ERRNL+ + + VK LI+ S +D +F VLE +L H LK +
Sbjct: 27 ARNAAV-ERRNLITVCRFSVKTLIDRSCFE--TIDDSSPEFNNFAAVLEQILSHRLKGQV 83
Query: 118 GLLG--PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLAD 175
G + WD +++ + + S+ ++ V + + RAW+R+ALM+K L++
Sbjct: 84 TWFGYESPRSFWDYIRVA--CRKVSQNCICSIENMENVSSSRAKGRAWIRVALMEKHLSE 141
Query: 176 YLQVLVDHRD-DILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQ-QGV 233
Y+ + RD ++E A+++ +EA ++ G LL LN ID + C+K E LD V
Sbjct: 142 YISTAL--RDFKTTRRFYEDGAIVLGEEANMLAGMLLGLNAIDFSFCLKGEGLDGTFPAV 199
Query: 234 IDFSLYLR--------------------SACYHDHPEEV--------------TSQVEDN 259
ID++ YL+ S PE V +V
Sbjct: 200 IDYTPYLKFEQSSDSISSDEEELRTFGSSDSESSTPENVGPPLILDENTWFNKCKRVRQK 259
Query: 260 MSLVLDQKNYIEELNR 275
L L+QK Y+EEL R
Sbjct: 260 YQLTLEQKGYLEELLR 275
>sp|Q59EK9|RUN3A_HUMAN RUN domain-containing protein 3A OS=Homo sapiens GN=RUNDC3A PE=2
SV=2
Length = 446
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 41/290 (14%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
+RN V +ER+NL+ + + VK L+E + +D +F +LE +L H K
Sbjct: 21 SRN-VAVERKNLITVCRFSVKTLLE--KYTAEPIDDSSEEFVNFAAILEQILSHRFK-AC 76
Query: 118 GLLGP--------KKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALM 169
GP ++ WD ++L P ++ +S+ ++ + T + RAW+R+ALM
Sbjct: 77 APAGPVSWFSSDGQRGFWDYIRLACSKVP--NNCVSSIENMENISTARAKGRAWIRVALM 134
Query: 170 QKKLADYLQ-VLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLD 228
+K++++Y+ L D R ++++ A+++ DEA ++ G L+ L+ ID + C+K E LD
Sbjct: 135 EKRMSEYITTALRDTR--TTRRFYDSGAIMLRDEATILTGMLIGLSAIDFSFCLKGEVLD 192
Query: 229 CQQG-VIDFSLYLRSACYHD--------HPEEVTSQVEDN------MSLVLDQKNYIEEL 273
+ VID++ YL+ +D H E +S EDN + LV D+ ++ +
Sbjct: 193 GKTPVVIDYTPYLKFTQSYDYLTDEEERHSAE-SSTSEDNSPEHPYLPLVTDEDSWYSKW 251
Query: 274 NRHLNATVGNLQTQVESLTTTNALMREDLSIAEKNLRILIQENENLKNQL 323
++ ++ + + + E + + E L+ L EN L+ QL
Sbjct: 252 HK--------MEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL 293
>sp|Q4R7B9|RUN3B_MACFA RUN domain-containing protein 3B OS=Macaca fascicularis GN=RUNDC3B
PE=2 SV=1
Length = 456
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 44/252 (17%)
Query: 62 VIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLLG 121
+ERRNL+ + + VK LI+ S +D +F +LE +L H LK + G
Sbjct: 29 AAVERRNLITVCRFSVKTLIDRS--CFETIDDSSPEFNNFAAILEQILSHRLKGQVTWFG 86
Query: 122 --PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQV 179
+ WD +++ + + S+ ++ V + + RAW+R+ALM+K L++Y+
Sbjct: 87 YESPRSFWDYIRVA--CRKVSQNCICSIENMENVSSSRAKGRAWIRVALMEKHLSEYIST 144
Query: 180 LVDHRD-DILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQ-QGVIDFS 237
+ RD ++E A+++ +EA ++ G LL LN ID + C+K E LD VID++
Sbjct: 145 AL--RDFKTTRRFYEDGAIVLGEEANMLAGMLLGLNAIDFSFCLKGEGLDGSFPAVIDYT 202
Query: 238 LYLR--------------------SACYHDHPEEV--------------TSQVEDNMSLV 263
YL+ S PE V +V+ L
Sbjct: 203 PYLKYIQSSDSISSDEEELRTLGSSGSESSTPENVGPPFLMDENSWFNKCKRVKQKYQLT 262
Query: 264 LDQKNYIEELNR 275
L+QK Y+EEL R
Sbjct: 263 LEQKGYLEELLR 274
>sp|Q5R565|RUN3A_PONAB RUN domain-containing protein 3A OS=Pongo abelii GN=RUNDC3A PE=2
SV=1
Length = 446
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 41/290 (14%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
+RN V +ER+NL+ + + VK L+E + +D +F +LE +L H K
Sbjct: 21 SRN-VAVERKNLITVCRFSVKTLLE--KYTAEPIDDSSEEFVNFAAILEQILSHRFK-AC 76
Query: 118 GLLGP--------KKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALM 169
GP ++ WD ++L P ++ +S+ ++ + T + RAW+R+ALM
Sbjct: 77 APAGPVSWFSSDGQRGFWDYIRLACSKVP--NNCVSSIENMENISTARAKGRAWIRVALM 134
Query: 170 QKKLADYLQ-VLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLD 228
+K++++Y+ L D R ++++ A+++ DEA ++ G L+ L+ ID + C+K E LD
Sbjct: 135 EKRMSEYITTALRDTR--TTRRFYDSGAIMLRDEATILTGMLIGLSAIDFSFCLKGEVLD 192
Query: 229 CQQG-VIDFSLYLRSACYHD--------HPEEVTSQVEDN------MSLVLDQKNYIEEL 273
+ VID++ YL+ +D H E +S EDN + LV D+ ++ +
Sbjct: 193 GKTPVVIDYTPYLKFTQSYDYLTDEEERHSAE-SSTSEDNSPEHPYLPLVTDEDSWYSKW 251
Query: 274 NRHLNATVGNLQTQVESLTTTNALMREDLSIAEKNLRILIQENENLKNQL 323
++ ++ + + + E + + E L+ L EN L+ QL
Sbjct: 252 HK--------MEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL 293
>sp|Q0V9V7|RUN3A_XENTR RUN domain-containing protein 3A OS=Xenopus tropicalis GN=rundc3a
PE=2 SV=1
Length = 440
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 131/272 (48%), Gaps = 44/272 (16%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKK 117
+RN + +ER+NL+ + + VK L+E + +D +F +LEH+L H K
Sbjct: 21 SRN-IAVERKNLLTVCRFSVKTLLE--KYTAEPIDDSSEEFVNFAAILEHILSHRFKGHV 77
Query: 118 GLLGP--KKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLAD 175
++ WD +++ + ++ +S+ ++ + + + RAW+RLALM+K+L++
Sbjct: 78 SWFSTDGQRGFWDYIRIA--CSKVTNNCISSIENMENISSARAKGRAWIRLALMEKRLSE 135
Query: 176 YL-QVLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDLDCQQ-GV 233
Y+ L D R +++ A+L+ +E+ V+ G L+ L+ ID + C+K E +D + V
Sbjct: 136 YIVTALRDTR--TTRRFYDDGAILLREESSVLTGMLIGLSAIDFSFCLKGEGIDGKTPAV 193
Query: 234 IDFSLYLRSACYHD----------------------HP--------EEVTS---QVEDNM 260
ID++ YL+ +D HP E S ++E
Sbjct: 194 IDYTPYLKFTQSYDYLSEEDDRESVGGSSSEDSSPEHPYLPLLTDEESWYSKWRKMEQKF 253
Query: 261 SLVLDQKNYIEELNRHLNATVGNLQTQVESLT 292
+V QK Y+EEL R + NL+ + + LT
Sbjct: 254 RIVYAQKGYLEELVRLRETQLKNLEAENKRLT 285
>sp|Q96NL0|RUN3B_HUMAN RUN domain-containing protein 3B OS=Homo sapiens GN=RUNDC3B PE=2
SV=1
Length = 473
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 62/273 (22%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLK--- 114
ARN + ERRNL+ + + VK LI+ S +D +F +LE +L H LK
Sbjct: 26 ARNAAV-ERRNLITVCRFSVKTLIDRS--CFETIDDSSPEFNNFAAILEQILSHRLKEIS 82
Query: 115 -----------PKKG---LLG--PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMG 158
P +G G + WD +++ + + S+ ++ V +
Sbjct: 83 QSCRWLAHLQIPLQGQVTWFGYESPRSFWDYIRVA--CRKVSQNCICSIENMENVSSSRA 140
Query: 159 RARAWLRLALMQKKLADYLQVLVDHRD-DILVEYFETDALLMSDEAIVILGKLLSLNVID 217
+ RAW+R+ALM+K L++Y+ + RD ++E A+++ +EA ++ G LL LN ID
Sbjct: 141 KGRAWIRVALMEKHLSEYISTAL--RDFKTTRRFYEDGAIVLGEEANMLAGMLLGLNAID 198
Query: 218 CNLCVKEEDLDCQ-QGVIDFSLYLR--------------------SACYHDHPEEV---- 252
+ C+K E LD VID++ YL+ S PE V
Sbjct: 199 FSFCLKGEGLDGSFPAVIDYTPYLKYIQSSDSISSDEEELRTLGSSGSESSTPENVGPPF 258
Query: 253 ----------TSQVEDNMSLVLDQKNYIEELNR 275
+V+ L L+QK Y+EEL R
Sbjct: 259 LMDENSWFNKCKRVKQKYQLTLEQKGYLEELLR 291
>sp|Q08E29|RUN3B_BOVIN RUN domain-containing protein 3B OS=Bos taurus GN=RUNDC3B PE=2 SV=1
Length = 423
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 58 ARNPVIIERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLK--- 114
ARN + ERRNL+ + + VK LI+ S +D +F +LE +L H LK
Sbjct: 25 ARNAAV-ERRNLITVCRFSVKTLIDRS--CFETIDDSSPEFNNFAAILEQILSHRLKESS 81
Query: 115 -----------PKKGLL-----GPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMG 158
P +G + G + WD +++ + + S+ ++ V +
Sbjct: 82 QSCRWLSHLQIPLQGQVTWFGYGSPRSFWDYIRVA--CRKVSQNCICSIENMEHVSSSRA 139
Query: 159 RARAWLRLALMQKKLADYLQVLVDHRD-DILVEYFETDALLMSDEAIVILGKLLSLNVID 217
+ RAW+R+ALM+K L++Y+ + RD ++E A+++ +EA ++ G LL LN ID
Sbjct: 140 KGRAWIRVALMEKHLSEYISTAL--RDFKTTRRFYEDGAIVLGEEANMLAGMLLGLNAID 197
Query: 218 CNLCVKEEDLDCQ-QGVIDFSLYLR 241
+ C+K E LD VID+ YLR
Sbjct: 198 FSFCLKGERLDGNLPAVIDYIPYLR 222
>sp|Q5U3W3|RUN3B_DANRE RUN domain-containing protein 3B OS=Danio rerio GN=rundc3b PE=2
SV=1
Length = 450
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 12/183 (6%)
Query: 64 IERRNLVNISKLIVKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLLG-- 121
+ERRNL+ + + VK LI+ S +D +F +LEH+L H LK + G
Sbjct: 22 VERRNLITVCRFSVKTLIDRSCFE--TIDDTSAEFINFVSILEHILSHRLKGQVSWFGYE 79
Query: 122 PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVLV 181
+ WD +++ P + S+ ++ V++ + RAW+R+ALM+K+L++Y+ +
Sbjct: 80 SPRSFWDFIRMACSKVPHS--CIHSIENMENVRSSRAKGRAWIRVALMEKRLSEYISAAL 137
Query: 182 DHRD-DILVEYFETDALLMSDEAIVILGKLLSLNVIDCNLCVKEEDL--DCQQGVIDFSL 238
RD ++E ALL+ +EA ++ L+ LN ID + C+K E L DC VID++
Sbjct: 138 --RDFKTTRRFYEEGALLLGEEAGLLADTLIGLNAIDFSFCLKGEGLDEDCPV-VIDYTP 194
Query: 239 YLR 241
YL+
Sbjct: 195 YLK 197
>sp|Q9BQS8|FYCO1_HUMAN FYVE and coiled-coil domain-containing protein 1 OS=Homo sapiens
GN=FYCO1 PE=1 SV=3
Length = 1478
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%)
Query: 77 VKELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLLGPKKELWDILQLVEKL 136
V EL + Q+ G + D L F LE++L+ K K LLG KK+ WD
Sbjct: 21 VTELSKEFQEAGEPITDDSTSLHKFSYKLEYLLQFDQKEKATLLGNKKDYWDYFCACLAK 80
Query: 137 NPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDA 196
A+D V+ + ++T +G+ RA++R +L+ ++LAD LQ + Y+
Sbjct: 81 VKGANDGIRFVKSISELRTSLGKGRAFIRYSLVHQRLADTLQQCFMNTKVTSDWYYARSP 140
Query: 197 LLMSDEAIVILGKLLSLNVIDCNLCVKEEDLD 228
L + I+G+L L + +L + DLD
Sbjct: 141 FLQPKLSSDIVGQLYELTEVQFDLASRGFDLD 172
>sp|Q8VDC1|FYCO1_MOUSE FYVE and coiled-coil domain-containing protein 1 OS=Mus musculus
GN=Fyco1 PE=1 SV=1
Length = 1437
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%)
Query: 79 ELIETSQKHGRMLDSDHMPLQHFFIVLEHVLRHGLKPKKGLLGPKKELWDILQLVEKLNP 138
EL ++ G + D L F LE++L+ K K LLG KK+ WD
Sbjct: 23 ELSHEFKEGGEPITDDSTSLHKFSYKLEYLLQFDQKEKASLLGSKKDYWDYFCACLAKVK 82
Query: 139 EASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDALL 198
A+D VR + ++T +G+ RA++R +L+ ++LAD LQ + Y+ L
Sbjct: 83 GANDGIRFVRSISELRTSLGKGRAFIRYSLVHQRLADTLQQCFMNTKVTSDWYYARSPFL 142
Query: 199 MSDEAIVILGKLLSLNVIDCNLCVKEEDLD 228
+ I+G+L L + +L + DLD
Sbjct: 143 KPKLSSDIVGQLYELTEVQFDLAPRGYDLD 172
>sp|Q6ZNE9|RUFY4_HUMAN RUN and FYVE domain-containing protein 4 OS=Homo sapiens GN=RUFY4
PE=2 SV=2
Length = 571
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 98 LQHFFIVLEHVLRHGLKPKKGLLGPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHM 157
L LE +L+ K +K LGP+K+ WD L + + VR +KT +
Sbjct: 39 LHRLCGCLELLLQFDQKEQKSFLGPRKDYWDFLCTALRRQRGNMEPIHFVRSQDKLKTPL 98
Query: 158 GRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVID 217
G+ RA++R L + +LA+ LQ+ + + + Y LL + IL L +LN +
Sbjct: 99 GKGRAFIRFCLARGQLAEALQLCLLNSELTREWYGPRSPLLCPERQEDILDSLYALNGVA 158
Query: 218 CNLCVKEEDLD 228
L +++ DLD
Sbjct: 159 FELDLQQPDLD 169
>sp|Q3TYX8|RUFY4_MOUSE RUN and FYVE domain-containing protein 4 OS=Mus musculus GN=Rufy4
PE=2 SV=3
Length = 563
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 98 LQHFFIVLEHVLRHGLKPKKGLLGPKKELWDILQLVEKLNPEASDITASVRDLPTVKTHM 157
L LE +L+ K ++ LG +K+ WD L + + ++ + + +KT +
Sbjct: 39 LHRLCGCLELLLQFDQKEQRSFLGARKDYWDFLFTALRRHRGYTEQMSFICSQDKLKTSL 98
Query: 158 GRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLSLNVID 217
G+ RA++RL L + +LA+ +Q+ + + Y LL ++ IL L +LN +
Sbjct: 99 GKGRAFIRLCLARGQLAESMQLCLLNPQLTREWYGPRSPLLCAELQEDILDSLYALNGVA 158
Query: 218 CNLCVKEEDLD 228
NL ++ DLD
Sbjct: 159 FNLDLQRPDLD 169
>sp|Q6ZUT9|DEN5B_HUMAN DENN domain-containing protein 5B OS=Homo sapiens GN=DENND5B PE=1
SV=2
Length = 1274
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 36/145 (24%)
Query: 104 VLEHVLRHGLKPKKGLLGPKKELWD-ILQLVEK-------------LNPEASDITASVRD 149
+LE + HGL+ K+G K LW ++Q ++ L PE + V
Sbjct: 784 LLERIWSHGLQVKQG----KSALWSHLIQFQDREEKQEHLAESPVALGPERRKSDSGVM- 838
Query: 150 LPT-----------------VKTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYF 192
LPT +KT +GRARAW+RL+L +K L+ +L+ L+ ++ Y
Sbjct: 839 LPTLRVSLIQDMRHIQNMSEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSNQPLTKKLYK 898
Query: 193 ETDALLMSDEAIVILGKLLSLNVID 217
L +E L LLSLN +D
Sbjct: 899 RYAFLRCEEEREQFLYHLLSLNAVD 923
>sp|Q6PAL8|DEN5A_MOUSE DENN domain-containing protein 5A OS=Mus musculus GN=Dennd5a PE=1
SV=1
Length = 1287
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 41/149 (27%)
Query: 104 VLEHVLRHGLKPKKGLLGPKKELWD----------------------ILQLVEKLNPEAS 141
+LE + HGL+ K+G K LW IL E+ +AS
Sbjct: 799 LLERIWSHGLQVKQG----KSALWSHLLHYQENRQRKLTSGSLSTSGILLDSERRKSDAS 854
Query: 142 DITASVR-----------DLPTVKTHMGRARAWLRLALMQKKLADYL-QVLVDHRDDILV 189
+ + +R ++ +KT +G+ARAW+RL++ +K L+ +L Q+L DH ++
Sbjct: 855 AVMSPLRISLIQDMRHIQNIGEIKTDVGKARAWVRLSMEKKLLSRHLKQLLSDH--ELTK 912
Query: 190 EYFETDALL-MSDEAIVILGKLLSLNVID 217
+ ++ A L DE L LLS N +D
Sbjct: 913 KLYKRYAFLRCDDEKEQFLYHLLSFNAVD 941
>sp|A2RSQ0|DEN5B_MOUSE DENN domain-containing protein 5B OS=Mus musculus GN=Dennd5b PE=1
SV=2
Length = 1274
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 36/145 (24%)
Query: 104 VLEHVLRHGLKPKKGLLGPKKELWD-ILQLVEK-------------LNPEASDITASVRD 149
+LE + HGL K+G K LW +LQ ++ L PE + V
Sbjct: 784 LLERIWSHGLLVKQG----KSALWSHLLQFQDREEKQEHLTDSPVALGPERRKSDSGVM- 838
Query: 150 LPT-----------------VKTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYF 192
LPT +KT +GRARAW+RL+L +K L+ +L+ L+ ++ Y
Sbjct: 839 LPTLRVSLIQDMRHIQNMTEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSNQPLTKKLYK 898
Query: 193 ETDALLMSDEAIVILGKLLSLNVID 217
L +E L LLSLN +D
Sbjct: 899 RYAFLRCEEEREQFLYHLLSLNAVD 923
>sp|Q6NXD8|DEN5B_DANRE DENN domain-containing protein 5B OS=Danio rerio GN=dennd5b PE=2
SV=2
Length = 1311
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 147 VRDLPTVKTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDALLMSDEAIVI 206
++++ +KT +GRARAW+RL+L +K L+ +L+ L+ ++ Y L +E
Sbjct: 890 IQNMAEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSNQALTKKLYKRYAFLRCEEEKEQF 949
Query: 207 LGKLLSLNVID 217
L LLSLN +D
Sbjct: 950 LFHLLSLNAVD 960
>sp|Q08DX0|SNX29_BOVIN Sorting nexin-29 OS=Bos taurus GN=SNX29 PE=2 SV=1
Length = 817
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 13/138 (9%)
Query: 105 LEHVLRHGLKPKKGLLGPKKELWDILQLVEKLNPE-----------ASDITASVRDLPTV 153
E VL+HGLK +GL + K E + L +
Sbjct: 50 FEAVLQHGLKRSRGLALTAAAIKQAAGFASKTETEPVFWFYVKEVLSKHELQRFHALRHI 109
Query: 154 KTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLS- 212
+ +GR RAWLR AL + L YL +L+ R L ++E A +M +E +L + +
Sbjct: 110 ASDVGRGRAWLRCALNENSLERYLHMLLADRGR-LSTFYEDWAFVMDEERSSMLPTMAAG 168
Query: 213 LNVIDCNLCVKEEDLDCQ 230
LN I + + +DL+ Q
Sbjct: 169 LNSILFAINIDNKDLNGQ 186
>sp|Q5PQS0|PKHM1_RAT Pleckstrin homology domain-containing family M member 1 OS=Rattus
norvegicus GN=Plekhm1 PE=1 SV=1
Length = 1059
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 122 PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVLV 181
P+ W +L+ V + I + + L + T +GR RAWLRLAL + YL++L+
Sbjct: 84 PQPVFWPLLKAVTHKH-----IISDLEHLVFINTDVGRCRAWLRLALNDGLMECYLKLLL 138
Query: 182 DHRDDILVEYFETDALLM-SDEAIVILGKLLSLNVIDCNLCVKEEDLD 228
L EY++ ALL ++EA +L L L + L K L+
Sbjct: 139 -QEPARLCEYYQPTALLRDAEEAEFLLSFLQGLTSLSFELSYKSAILN 185
>sp|Q7TSI1|PKHM1_MOUSE Pleckstrin homology domain-containing family M member 1 OS=Mus
musculus GN=Plekhm1 PE=1 SV=1
Length = 1074
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 122 PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVLV 181
P+ W +L+ + + I + + L + T +GR RAWLRLAL + YL++L+
Sbjct: 84 PQPVFWPLLKAITHRH-----IVSDLEHLVFINTDVGRCRAWLRLALNDGLMECYLKLLL 138
Query: 182 DHRDDILVEYFETDALLM-SDEAIVILGKLLSLNVIDCNLCVKEEDLD 228
L EY++ ALL ++EA +L L L + L K L+
Sbjct: 139 -QEPARLCEYYQPTALLRDAEEAEFLLSFLQGLTSLSFELSYKSAILN 185
>sp|Q6IQ26|DEN5A_HUMAN DENN domain-containing protein 5A OS=Homo sapiens GN=DENND5A PE=1
SV=2
Length = 1287
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 41/149 (27%)
Query: 104 VLEHVLRHGLKPKKGLLGPKKELWD----------------------ILQLVEKLNPEAS 141
+LE + HGL+ K+G K LW IL E+ +AS
Sbjct: 799 LLERIWSHGLQVKQG----KSALWSHLLHYQDNRQRKLTSGSLSTSGILLDSERRKSDAS 854
Query: 142 DITASVR-----------DLPTVKTHMGRARAWLRLALMQKKLADYL-QVLVDHRDDILV 189
+ +R ++ +KT +G+ARAW+RL++ +K L+ +L Q+L DH ++
Sbjct: 855 SLMPPLRISLIQDMRHIQNIGEIKTDVGKARAWVRLSMEKKLLSRHLKQLLSDH--ELTK 912
Query: 190 EYFETDALL-MSDEAIVILGKLLSLNVID 217
+ ++ A L DE L LLS N +D
Sbjct: 913 KLYKRYAFLRCDDEKEQFLYHLLSFNAVD 941
>sp|Q9Y4G2|PKHM1_HUMAN Pleckstrin homology domain-containing family M member 1 OS=Homo
sapiens GN=PLEKHM1 PE=1 SV=3
Length = 1056
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 122 PKKELWDILQLVEKLNPEASDITASVRDLPTVKTHMGRARAWLRLALMQKKLADYLQVLV 181
P+ W +L+ V + I + + L V T +GR RAWLRLAL + YL++L+
Sbjct: 85 PQPVFWPLLKAVTHKH-----IISELEHLTFVNTDVGRCRAWLRLALNDGLMECYLKLLL 139
Query: 182 DHRDDILVEYFETDALLM-SDEAIVILGKLLSLNVIDCNLCVKEEDLD 228
+ L EY++ ALL ++E +L L L + L K L+
Sbjct: 140 QEQAR-LHEYYQPTALLRDAEEGEFLLSFLQGLTSLSFELSYKSAILN 186
>sp|Q80TQ5|PKHM2_MOUSE Pleckstrin homology domain-containing family M member 2 OS=Mus
musculus GN=Plekhm2 PE=1 SV=2
Length = 1018
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 153 VKTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLS 212
V T++GR+RAWL LAL + L YL++ ++ +L +Y+ +AL+ S + + + L+S
Sbjct: 86 VATNLGRSRAWLYLALNENSLESYLRLFQENL-GLLQKYYVRNALVCSHDHLTLFLTLVS 144
Query: 213 -LNVIDCNLCVKEEDLDCQQGVIDFSLYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIE 271
L I +L + LD + D Y + D + + S V + SL L+ N +
Sbjct: 145 GLEFIRFDLDLDAPYLDLAPYMPD---YYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVT 201
Query: 272 ELNRHLNATVGNLQTQVESLTTTNALMR---EDLSIAEKNLRILIQENENLKNQLANSS 327
N + + ++ LT T + R DL+ ++ + + Q + + A ++
Sbjct: 202 STNLEWDDSAIAPSSEDGDLTDTISGPRSTASDLTSSKTSTKSPTQRHNPFNEEQAETA 260
>sp|Q8TEQ0|SNX29_HUMAN Sorting nexin-29 OS=Homo sapiens GN=SNX29 PE=1 SV=3
Length = 813
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 105 LEHVLRHGLKPKKGL------------LGPKKE----LWDILQLVEKLNPEASDITASVR 148
E VL+HGLK +GL K E W ++ E LN S+R
Sbjct: 49 FEAVLQHGLKRSRGLALTAAAIKQAAGFASKTETEPVFWYYVK--EVLNKHELQRFYSLR 106
Query: 149 DLPTVKTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDALLMSDEAIVILG 208
+ + +GR RAWLR AL + L YL +L+ R L ++E + +M +E +L
Sbjct: 107 H---IASDVGRGRAWLRCALNEHSLERYLHMLLADRCR-LSTFYEDWSFVMDEERSSMLP 162
Query: 209 KLLS-LNVIDCNLCVKEEDLDCQ 230
+ + LN I + + +DL+ Q
Sbjct: 163 TMAAGLNSILFAINIDNKDLNGQ 185
>sp|Q8IWE5|PKHM2_HUMAN Pleckstrin homology domain-containing family M member 2 OS=Homo
sapiens GN=PLEKHM2 PE=1 SV=2
Length = 1019
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 153 VKTHMGRARAWLRLALMQKKLADYLQVLVDHRDDILVEYFETDALLMSDEAIVILGKLLS 212
V T++GR+RAWL LAL + L YL++ ++ +L +Y+ +AL+ S + + + L+S
Sbjct: 86 VATNLGRSRAWLYLALNENSLESYLRLFQENL-GLLHKYYVKNALVCSHDHLTLFLTLVS 144
Query: 213 -LNVIDCNLCVKEEDLDCQQGVIDFSLYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIE 271
L I L + LD + D Y + D + + S V + SL L+ N +
Sbjct: 145 GLEFIRFELDLDAPYLDLAPYMPD---YYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVT 201
Query: 272 ELN 274
N
Sbjct: 202 STN 204
>sp|Q8CHD8|RFIP3_MOUSE Rab11 family-interacting protein 3 OS=Mus musculus GN=Rab11fip3
PE=1 SV=2
Length = 1047
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 59/117 (50%)
Query: 266 QKNYIEELNRHLNATVGNLQTQVESLTTTNALMREDLSIAEKNLRILIQENENLKNQLAN 325
QK + ++ R + + NLQ +++ L N+ +R + N+ L +E + + +++
Sbjct: 817 QKELLCKMEREKSIEIENLQARLQQLDEENSELRSCTPCLKANIERLEEEKQKMLDEIEE 876
Query: 326 SSQHTSNLSVHEVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIKMINLEMYKK 382
+Q S ++ + + +RD Q+ I +LR+QLE ++++ LE+ ++
Sbjct: 877 LTQRLSEEQENKRKMGDRLSHERHQFQRDKEATQELIEDLRKQLEHLQLLRLEVEQR 933
>sp|Q99972|MYOC_HUMAN Myocilin OS=Homo sapiens GN=MYOC PE=1 SV=2
Length = 504
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 262 LVLDQKNYIEELNRHLNATVGNL-------QTQVESLTTTNALMREDLSIAEKNLRILIQ 314
L LDQ +E L +G L +TQ L T + + D S+ E+ + L Q
Sbjct: 102 LTLDQAARPQETQEGLQRELGTLRRERDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQ 161
Query: 315 ENENLKNQLANSSQHTSNL 333
ENENL +L +SSQ + L
Sbjct: 162 ENENLARRLESSSQEVARL 180
>sp|Q866N2|MYOC_RABIT Myocilin OS=Oryctolagus cuniculus GN=MYOC PE=2 SV=1
Length = 490
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 249 PEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGNLQTQVESLTTTNALMREDLSIAEKN 308
P+E+ +++ + + +++ +E R L A NL +R D S E+
Sbjct: 96 PQEIQEELQKELGTLRRERDQLESQTRELEAAYSNL-------------LR-DKSALEEE 141
Query: 309 LRILIQENENLKNQLANSSQHTSNLS 334
R L+QENE+L +L +SSQ + L+
Sbjct: 142 KRRLMQENEDLARRLESSSQEVARLA 167
>sp|Q6DIX6|BICR2_XENTR Bicaudal D-related protein 2 OS=Xenopus tropicalis GN=ccdc64b PE=2
SV=1
Length = 475
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 253 TSQVEDNMSLVLDQKNYIEELNRHLNATVGNLQTQVESLTTTNALMREDLSIAEKNLRIL 312
SQVE ++ L+ K+ EE NR L + G ++SL + NAL+ E E + L
Sbjct: 157 ASQVE--QAITLEMKSLKEE-NRDLTISRGQFAPCLQSLRSENALLLEKKKEMESQTKQL 213
Query: 313 IQENENLKNQL 323
+EN+N++NQL
Sbjct: 214 QEENDNVQNQL 224
>sp|O75154|RFIP3_HUMAN Rab11 family-interacting protein 3 OS=Homo sapiens GN=RAB11FIP3
PE=1 SV=1
Length = 756
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 59/117 (50%)
Query: 266 QKNYIEELNRHLNATVGNLQTQVESLTTTNALMREDLSIAEKNLRILIQENENLKNQLAN 325
QK + ++ R + + NLQT+++ L N+ +R + N+ L +E + L +++ +
Sbjct: 526 QKELLCKMEREKSIEIENLQTRLQQLDEENSELRSCTPCLKANIERLEEEKQKLLDEIES 585
Query: 326 SSQHTSNLSVHEVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIKMINLEMYKK 382
+ S ++ + + +RD Q+ I +LR+QLE ++++ LE ++
Sbjct: 586 LTLRLSEEQENKRRMGDRLSHERHQFQRDKEATQELIEDLRKQLEHLQLLKLEAEQR 642
>sp|Q863A3|MYOC_MACFA Myocilin OS=Macaca fascicularis GN=MYOC PE=3 SV=1
Length = 491
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 284 LQTQVESLTTTNALMREDLSIAEKNLRILIQENENLKNQLANSSQHTSNL 333
L+TQ L T + + D S+ E+ + L QENENL +L +SSQ + L
Sbjct: 118 LETQTRELETAYSNLLRDKSVLEEEKKRLRQENENLARRLESSSQEVARL 167
>sp|Q04750|TOP1_MOUSE DNA topoisomerase 1 OS=Mus musculus GN=Top1 PE=1 SV=2
Length = 767
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 226 DLDCQQGVIDFSLYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGN-- 283
+LD Q+ V++F + + + + V +V N+ L ++ K ++L LN + N
Sbjct: 519 ELDGQEYVVEFDFPGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKH 578
Query: 284 LQTQVESLTTTNALMREDLSIA-EKNLRILIQENENLKNQLANSSQHTSNLSV---HEVG 339
LQ +E LT + SI ++ L+ L +EN+ ++ + ++ +++ H+
Sbjct: 579 LQDLMEGLTAK-VFRTYNASITLQQQLKELTAPDENVPAKILSYNRANRAVAILCNHQRA 637
Query: 340 LKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIK 373
E +M L+ + K+D + + RR L+ K
Sbjct: 638 PPKTFEKSMMNLQSKIDAKKDQLADARRDLKSAK 671
>sp|O42657|YF82_SCHPO GRIP and coiled-coil domain-containing protein C27D7.02c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC27D7.02c PE=4 SV=1
Length = 750
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 272 ELNRHLNATVGNLQTQVESLTTTNALMREDLSIAEKNLRILIQ----ENENLKNQLANSS 327
E +R L +LQ + E LT L+RE ++K LR+L++ E ++LK N
Sbjct: 499 EFDRQLKEQEEDLQNKEEELTELRKLLREQTQDSQK-LRLLVEQLELERQDLKQAGEN-- 555
Query: 328 QHTSNLSV-HEVGLKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIKMINLEMYKKLQAL 386
H SNLS +E +K+ +E ++ + + Q+ I EL Q++++K+ E KK Q L
Sbjct: 556 -HYSNLSSDYETQIKS-LESSLTNSQAECVSFQEKINELNSQIDELKLKLNEANKKYQEL 613
>sp|Q07050|TOP1_CRIGR DNA topoisomerase 1 OS=Cricetulus griseus GN=TOP1 PE=2 SV=1
Length = 767
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 226 DLDCQQGVIDFSLYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGN-- 283
+LD Q+ V++F + + + + V +V N+ L ++ K ++L LN + N
Sbjct: 519 ELDGQEYVVEFDFPGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKH 578
Query: 284 LQTQVESLTTTNALMREDLSIA-EKNLRILIQENENLKNQLANSSQHTSNLSV---HEVG 339
LQ +E LT + SI ++ L+ L +EN+ ++ + ++ +++ H+
Sbjct: 579 LQDLMEGLTAK-VFRTYNASITLQQQLKELTAPDENVPAKILSYNRANRAVAILCNHQRA 637
Query: 340 LKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIK 373
E +M L+ + K+D + + RR L+ K
Sbjct: 638 PPKTFEKSMMNLQSKIDAKKDQLADARRDLKSAK 671
>sp|Q7YR26|TOP1_CHLAE DNA topoisomerase 1 OS=Chlorocebus aethiops GN=TOP1 PE=2 SV=1
Length = 767
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 226 DLDCQQGVIDFSLYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGN-- 283
+LD Q+ V++F + + + + V +V N+ L ++ K ++L LN + N
Sbjct: 519 ELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKH 578
Query: 284 LQTQVESLTTTNALMREDLSIA-EKNLRILIQENENLKNQLANSSQHTSNLSV---HEVG 339
LQ +E LT + SI ++ L+ L +EN+ ++ + ++ +++ H+
Sbjct: 579 LQDLMEGLTAK-VFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRA 637
Query: 340 LKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIK 373
E +M L+ + K++ + + RR L+ K
Sbjct: 638 PPKTFEKSMMNLQSKIDAKKEQLADARRDLKSAK 671
>sp|O94419|YQG2_SCHPO Putative GTPase-activating protein C1620.12c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1620.12c PE=3
SV=2
Length = 640
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 233 VIDFSLYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGNL--QTQVES 290
V ++ Y R+ P ++ + VED+++L +D + L+ H + N Q +E
Sbjct: 453 VQKYTFYTRT------PVDLNAWVEDSLALNIDTTQFPSYLSYHETSVSHNTYRQNNLEE 506
Query: 291 LTTTNALMREDLSIAEKNLRILIQENENLKNQLANSSQHTSNLSVHEVGLKAEMEVAMKL 350
L N + ++ E+ + +L +EN L L+N H V ++EME A ++
Sbjct: 507 LKNQNDYLTSQITNLEEGMVMLNKENTKLSEALSN----------HRVT-RSEMEEATEI 555
Query: 351 LERD 354
L+ +
Sbjct: 556 LKNN 559
>sp|Q9WUL0|TOP1_RAT DNA topoisomerase 1 OS=Rattus norvegicus GN=Top1 PE=2 SV=1
Length = 767
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 226 DLDCQQGVIDFSLYLRSACYHDHPEEVTSQVEDNMSLVLDQKNYIEELNRHLNATVGN-- 283
+LD Q+ V++F + + + + V +V N+ L ++ K ++L LN + N
Sbjct: 519 ELDGQEYVVEFDFPGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKH 578
Query: 284 LQTQVESLTTTNALMREDLSIA-EKNLRILIQENENLKNQLANSSQHTSNLSV---HEVG 339
LQ +E LT + SI ++ L+ L +EN+ ++ + ++ +++ H+
Sbjct: 579 LQDLMEGLTAK-VFRTYNASITLQQQLKELTAPDENVPAKILSYNRANRAVAILCNHQRA 637
Query: 340 LKAEMEVAMKLLERDVHQKQDTIIELRRQLEDIK 373
E +M L+ + K+D + + R+ L+ K
Sbjct: 638 PPKTFEKSMMNLQSKIDAKKDQLADARKDLKSAK 671
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,442,072
Number of Sequences: 539616
Number of extensions: 5619784
Number of successful extensions: 20883
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 412
Number of HSP's that attempted gapping in prelim test: 19984
Number of HSP's gapped (non-prelim): 1252
length of query: 386
length of database: 191,569,459
effective HSP length: 119
effective length of query: 267
effective length of database: 127,355,155
effective search space: 34003826385
effective search space used: 34003826385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)