BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1891
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5PQZ3|ZNT9_DANRE Zinc transporter 9 OS=Danio rerio GN=slc30a9 PE=2 SV=1
Length = 573
Score = 182 bits (463), Expect = 6e-46, Method: Composition-based stats.
Identities = 83/158 (52%), Positives = 121/158 (76%)
Query: 1 MGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLDKINAELESDV 60
MGLT TG+ D++GS VG +LG V+ F++ +N EAL+GRSI +++ K+ LE+D
Sbjct: 416 MGLTSLTGNPYYDSLGSLGVGTLLGTVSAFLIYTNTEALLGRSIQAEHMQKLTEFLENDP 475
Query: 61 MIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAF 120
+RAI+DVK MG S +R+KAEVDFDGR +TRSYL+KQD+ +L E+Q +KT +E+E F
Sbjct: 476 AVRAIHDVKATDMGLSKVRFKAEVDFDGRVVTRSYLEKQDIEQILNEIQQVKTPEELENF 535
Query: 121 LLKHSENIVDMVGGEIDRIEMKLRKKYPDIRHVDLEVL 158
+LKH ENI+D +G E+DR+E +L+++ P++RHVDLE+L
Sbjct: 536 MLKHGENIIDTLGAEVDRLEKELKQRNPEVRHVDLEIL 573
>sp|Q6PML9|ZNT9_HUMAN Zinc transporter 9 OS=Homo sapiens GN=SLC30A9 PE=1 SV=1
Length = 568
Score = 182 bits (461), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/158 (51%), Positives = 121/158 (76%)
Query: 1 MGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLDKINAELESDV 60
MGLT TG+ + D++GS VG +LG V+ F++ +N EAL+GRSI + + ++ LE+D
Sbjct: 411 MGLTSITGNPLYDSLGSLGVGTLLGMVSAFLIYTNTEALLGRSIQPEQVQRLTELLENDP 470
Query: 61 MIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAF 120
+RAI+DVK +G +R+KAEVDFDGR +TRSYL+KQD + ML+E+Q +KT +E+E F
Sbjct: 471 SVRAIHDVKATDLGLGKVRFKAEVDFDGRVVTRSYLEKQDFDQMLQEIQEVKTPEELETF 530
Query: 121 LLKHSENIVDMVGGEIDRIEMKLRKKYPDIRHVDLEVL 158
+LKH ENI+D +G E+DR+E +L+K+ P++RHVDLE+L
Sbjct: 531 MLKHGENIIDTLGAEVDRLEKELKKRNPEVRHVDLEIL 568
>sp|Q5R4H0|ZNT9_PONAB Zinc transporter 9 OS=Pongo abelii GN=SLC30A9 PE=2 SV=1
Length = 569
Score = 182 bits (461), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/158 (51%), Positives = 121/158 (76%)
Query: 1 MGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLDKINAELESDV 60
MGLT TG+ + D++GS VG +LG V+ F++ +N EAL+GRSI + + ++ LE+D
Sbjct: 412 MGLTSITGNPLYDSLGSLGVGTLLGMVSAFLIYTNTEALLGRSIQPEQVQRLTELLENDP 471
Query: 61 MIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAF 120
+RAI+DVK +G +R+KAEVDFDGR +TRSYL+KQD + ML+E+Q +KT +E+E F
Sbjct: 472 SVRAIHDVKATDLGLGKVRFKAEVDFDGRVVTRSYLEKQDFDQMLQEIQEVKTPEELETF 531
Query: 121 LLKHSENIVDMVGGEIDRIEMKLRKKYPDIRHVDLEVL 158
+LKH ENI+D +G E+DR+E +L+K+ P++RHVDLE+L
Sbjct: 532 MLKHGENIIDTLGAEVDRLEKELKKRNPEVRHVDLEIL 569
>sp|Q6DCE3|ZNT9_XENLA Zinc transporter 9 OS=Xenopus laevis GN=slc30a9 PE=2 SV=1
Length = 559
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 123/158 (77%)
Query: 1 MGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLDKINAELESDV 60
MGLT TG+ + D++GS VG +LG V+ F++ +N EAL+GRSI D + ++ LESD
Sbjct: 402 MGLTSLTGNPLYDSLGSLGVGTLLGAVSAFLIYTNTEALIGRSIQPDQVQRLTELLESDP 461
Query: 61 MIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAF 120
+RAI+DVK MG S +R+KAEVDFDGR +TRSYL+KQD++ +L E++ +KT +++EAF
Sbjct: 462 AVRAIHDVKATDMGMSKVRFKAEVDFDGRVVTRSYLEKQDIDLVLNEIRQVKTAEDLEAF 521
Query: 121 LLKHSENIVDMVGGEIDRIEMKLRKKYPDIRHVDLEVL 158
+LKH ENI+D +G E+DR+E +L+++ P++RHVDLE+L
Sbjct: 522 MLKHGENIIDTLGAEVDRLEKELKQRNPEVRHVDLEIL 559
>sp|Q5IRJ6|ZNT9_MOUSE Zinc transporter 9 OS=Mus musculus GN=Slc30a9 PE=1 SV=2
Length = 567
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 122/158 (77%)
Query: 1 MGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLDKINAELESDV 60
MGLT TG+ + D++GS VG +LG V+ F++ +N EAL+GRSI + + ++ LESD
Sbjct: 410 MGLTSITGNPLYDSLGSLGVGTLLGVVSAFLIYTNTEALLGRSIQPEQVQRLTELLESDP 469
Query: 61 MIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAF 120
+RAI+DVK +G +R+KAEVDFDGR +TRSYL+KQD + M++E+Q +KT +++EAF
Sbjct: 470 SVRAIHDVKATDLGLGKVRFKAEVDFDGRVVTRSYLEKQDFDQMMQEIQEVKTPEQLEAF 529
Query: 121 LLKHSENIVDMVGGEIDRIEMKLRKKYPDIRHVDLEVL 158
+LKH ENI+D +G E+DR+E +L+K+ P++RHVDLE+L
Sbjct: 530 MLKHGENIIDTLGAEVDRLEKELKKRNPEVRHVDLEIL 567
>sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2
SV=1
Length = 457
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 7 TGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLDKINAELESDVMIRAIY 66
TG+ I D +GS +VG +LG VA F++ N AL+GR++ D + K+ L +D ++ ++Y
Sbjct: 294 TGNPIYDPIGSIVVGNLLGMVAIFLIQRNRHALIGRAMDDQDMSKVLKFLRNDSVVDSLY 353
Query: 67 DVKGIQMGNSLIRYKAEVDFDGRELTRSYLD---KQDLNTMLEEVQNMKTIDEMEAFLLK 123
D K +G R+KAE+DF+G+ + ++YL +++ M E M +
Sbjct: 354 DCKSEVIGPGSFRFKAEIDFNGQMVVQNYLKRTGREEWAKMFREAAKNGDDSAMLNIMSN 413
Query: 124 HSENIVDMVGGEIDRIEMKLRKKYPDIRHVDLEV 157
+ E +V +G E+DR+E ++++ P I+HVD+E
Sbjct: 414 YGEEVVTALGSEVDRLEKEIQELVPGIQHVDIEA 447
>sp|P68653|TERS_ECOL6 P21 prophage-derived terminase small subunit OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nohA PE=3
SV=1
Length = 182
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 84 VDFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAFLLKHSENIVDMVGGEIDRIEMKL 143
+D++ LT++ D Q+L E+ ++T E+ F+L+ + + G + R+ + L
Sbjct: 82 IDYERYRLTKAQADAQELKNAREDGVVLET--ELFTFILQR---VAQEISGILVRVPLTL 136
Query: 144 RKKYPDIRHVDLEVL 158
++KYPDI L+V+
Sbjct: 137 QRKYPDISPSHLDVV 151
>sp|P68654|TERS_BPP21 Terminase small subunit OS=Enterobacteria phage P21 GN=1 PE=3 SV=1
Length = 182
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 84 VDFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAFLLKHSENIVDMVGGEIDRIEMKL 143
+D++ LT++ D Q+L E+ ++T E+ F+L+ + + G + R+ + L
Sbjct: 82 IDYERYRLTKAQADAQELKNAREDGVVLET--ELFTFILQR---VAQEISGILVRVPLTL 136
Query: 144 RKKYPDIRHVDLEVL 158
++KYPDI L+V+
Sbjct: 137 QRKYPDISPSHLDVV 151
>sp|Q823N2|MURE_CHLCV UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Chlamydophila caviae (strain GPIC) GN=murE
PE=3 SV=1
Length = 483
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 4 TLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYL-DKINAELESDVMI 62
TL+ G + P G++G + + + ++ I+ G + P+ L K AE+ + +
Sbjct: 122 TLFDGCNKPS--------GLIGTIEHVLGNNRIQD--GYTTPESCLLQKYLAEMVKNRLT 171
Query: 63 RAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEVQNMK 112
A+ +V + + ++ AEVDFD LT LD D + EE N K
Sbjct: 172 SAVMEVSSVGL---VLERLAEVDFDVGVLTNITLDHLDFHGSFEEYINAK 218
>sp|Q3A5X3|CRCB_PELCD Protein CrcB homolog OS=Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1) GN=crcB PE=3 SV=1
Length = 123
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 22 GILGCVAYFIVSSNIEALVGRSIP 45
G LGC++ F+VS + AL+GR++P
Sbjct: 10 GALGCLSRFMVSGWVYALIGRALP 33
>sp|P0A9K1|PHOH_ECOLI Protein PhoH OS=Escherichia coli (strain K12) GN=phoH PE=1 SV=1
Length = 354
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 62 IRAIYDVKGIQMGNSLIRYKAEVDFDGRELTR-SYLDKQDLNT---MLEEVQNMKTIDEM 117
R +YDV ++G S ++Y + E+ +Y+ + +L+E QN+ T +M
Sbjct: 227 FRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDEAQNV-TAAQM 285
Query: 118 EAFLLKHSENIVDMVGGEIDRIEM 141
+ FL + EN+ +V G+I + ++
Sbjct: 286 KMFLTRLGENVTVIVNGDITQCDL 309
>sp|P0A9K2|PHOH_ECO57 Protein PhoH OS=Escherichia coli O157:H7 GN=phoH PE=3 SV=1
Length = 354
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 62 IRAIYDVKGIQMGNSLIRYKAEVDFDGRELTR-SYLDKQDLNT---MLEEVQNMKTIDEM 117
R +YDV ++G S ++Y + E+ +Y+ + +L+E QN+ T +M
Sbjct: 227 FRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDEAQNV-TAAQM 285
Query: 118 EAFLLKHSENIVDMVGGEIDRIEM 141
+ FL + EN+ +V G+I + ++
Sbjct: 286 KMFLTRLGENVTVIVNGDITQCDL 309
>sp|O43837|IDH3B_HUMAN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo
sapiens GN=IDH3B PE=1 SV=2
Length = 385
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Query: 105 LEEVQNMKTIDEMEAFLLKHSENIVDMVG---------GEIDRIEMKLRKK---YPDIRH 152
L EVQNM + +++E L EN V ++G GE+ +M+LR+K + ++ H
Sbjct: 85 LSEVQNMASEEKLEQVLSSMKENKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVH 144
Query: 153 V 153
V
Sbjct: 145 V 145
>sp|Q57891|Y449_METJA Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0449 PE=3 SV=1
Length = 283
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 8 GSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLDKINAELESDVMIRAIYD 67
G + DA+ +V ++ VA+ I +NI+ L GR+ P + + I E + + ++D
Sbjct: 169 GIYYGDAIAGIIVALMIAKVAFDICLTNIDYLTGRAPPKKFFELIEKEALNVDKVIGVHD 228
Query: 68 VKGIQMG 74
+K +G
Sbjct: 229 IKAHYVG 235
>sp|Q28479|IDH3B_MACFA Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Macaca fascicularis GN=IDH3B PE=2 SV=2
Length = 385
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Query: 105 LEEVQNMKTIDEMEAFLLKHSENIVDMVG---------GEIDRIEMKLRKK---YPDIRH 152
L EVQNM + +++E L EN V ++G GE+ +M+LR+K + ++ H
Sbjct: 85 LSEVQNMASEEKLEQVLSSMKENKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVH 144
Query: 153 V 153
V
Sbjct: 145 V 145
>sp|O77784|IDH3B_BOVIN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos
taurus GN=IDH3B PE=2 SV=2
Length = 385
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Query: 105 LEEVQNMKTIDEMEAFLLKHSENIVDMVG---------GEIDRIEMKLRKK---YPDIRH 152
L EVQNM + +++E L EN V ++G GE+ +M+LR+K + ++ H
Sbjct: 85 LSEVQNMASEEKLEQVLSSMKENKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVH 144
Query: 153 V 153
V
Sbjct: 145 V 145
>sp|Q5RBT4|IDH3B_PONAB Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo
abelii GN=IDH3B PE=2 SV=1
Length = 385
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Query: 105 LEEVQNMKTIDEMEAFLLKHSENIVDMVG---------GEIDRIEMKLRKK---YPDIRH 152
L EVQNM + +++E L EN V ++G GE+ +M+LR+K + ++ H
Sbjct: 85 LSEVQNMASEEKLEQVLSSMKENKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVH 144
Query: 153 V 153
V
Sbjct: 145 V 145
>sp|Q12263|GIN4_YEAST Serine/threonine-protein kinase GIN4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GIN4 PE=1 SV=1
Length = 1142
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 93 RSYLDKQDLNTMLEEVQNMKTID--EMEAFLLKHSENIVDMVGGEIDRIEMKLRKKYPDI 150
R L+K+DL EE++ ID ++E L KH E +D G I I + + +I
Sbjct: 593 RKLLEKEDLKRKQEELKKQIEIDISDLEQELSKHKEEKLD---GNIRSISAPMENEEKNI 649
Query: 151 RHVDLEV 157
H+++++
Sbjct: 650 NHLEVDI 656
>sp|Q68FX0|IDH3B_RAT Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Rattus norvegicus GN=Idh3B PE=1 SV=1
Length = 385
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Query: 105 LEEVQNMKTIDEMEAFLLKHSENIVDMVG---------GEIDRIEMKLRKK---YPDIRH 152
L EVQNM + +++E L EN V ++G GE+ +M+LR+K + ++ H
Sbjct: 85 LSEVQNMASEEKLEQVLSSMKENKVAIIGKIYTPMEYKGELASYDMQLRRKLDLFANVVH 144
Query: 153 V 153
V
Sbjct: 145 V 145
>sp|Q97WC6|CBID_SULSO Putative cobalt-precorrin-6A synthase [deacetylating] OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=cbiD PE=3 SV=1
Length = 349
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 46 DDYLDKINAELESDVMIRAIYDVKGIQMGNSLIRYKAEVDFD 87
DDYL+ I EL +IR YD I GNS +Y AE+ FD
Sbjct: 180 DDYLEHIRCELN---VIRQSYDYVVIAPGNSAAKYAAEL-FD 217
>sp|P56931|E2F2_MOUSE Transcription factor E2F2 OS=Mus musculus GN=E2f2 PE=1 SV=2
Length = 443
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 59 DVMIRAIYDVKGIQMGNSLIRYKAE--VDFDGREL----TRSYLDKQDLNTMLEEVQNM- 111
DV R IYD+ + G LIR K++ + + GREL TR +Q L L+E+ N
Sbjct: 165 DVQKRRIYDITNVLEGIQLIRKKSKNNIQWVGRELFEDPTRPS-RQQQLGQELKELMNAE 223
Query: 112 KTIDEM 117
+T+D++
Sbjct: 224 QTLDQL 229
>sp|P46307|RR3_CHLMO 30S ribosomal protein S3, chloroplastic OS=Chlamydomonas moewusii
GN=rps3 PE=3 SV=1
Length = 800
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 49 LDKINAELESDVMIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLD-KQDLNTMLEE 107
L+ I+ E I + DV +++ Y A + R+L + KQ L+ L
Sbjct: 556 LENISNEYRKMKFIEYLKDVVQKHRTDNIYLYLASISESRRKLKEIKNEVKQHLDLYLPG 615
Query: 108 VQNMKTIDEMEAFLLKHSENIVDMVGGEIDRIEMKLRKKYP 148
++K +++ K SE+ +++ E++ + MKL KK+P
Sbjct: 616 ANSIKELNQ------KSSEDSINLATNEVNNVLMKLAKKHP 650
>sp|C0MFA1|SYP_STRS7 Proline--tRNA ligase OS=Streptococcus equi subsp. zooepidemicus
(strain H70) GN=proS PE=3 SV=1
Length = 618
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 19/99 (19%)
Query: 29 YFIVSSNIEALVGRSIPDDYLDKINAELESDVMIRAIYDVKGIQMGNSLIRYKAEVDFDG 88
+ ++ +I +L IP++ L++I AEL S ++ G I Y +E +
Sbjct: 223 WLVLDKSIPSLA--DIPEEVLEEIKAELASWLV-----------SGEDTIAYSSESSYAA 269
Query: 89 R-ELTRSYLDKQDLNTMLE-----EVQNMKTIDEMEAFL 121
E+ S T L+ E N KTIDE+ AFL
Sbjct: 270 NLEMATSEYKPSSKVTALDDLVEIETPNCKTIDEVAAFL 308
>sp|C0M9E6|SYP_STRE4 Proline--tRNA ligase OS=Streptococcus equi subsp. equi (strain
4047) GN=proS PE=3 SV=1
Length = 618
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 19/99 (19%)
Query: 29 YFIVSSNIEALVGRSIPDDYLDKINAELESDVMIRAIYDVKGIQMGNSLIRYKAEVDFDG 88
+ ++ +I +L IP++ L++I AEL S ++ G I Y +E +
Sbjct: 223 WLVLDKSIPSLA--DIPEEVLEEIKAELASWLV-----------SGEDTIAYSSESSYAA 269
Query: 89 R-ELTRSYLDKQDLNTMLE-----EVQNMKTIDEMEAFL 121
E+ S T L+ E N KTIDE+ AFL
Sbjct: 270 NLEMATSEYKSSSKVTALDDLVEIETPNCKTIDEVAAFL 308
>sp|Q9SL29|CNG15_ARATH Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis
thaliana GN=CNGC15 PE=3 SV=1
Length = 678
Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 85 DFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAFLLKHSENIVDMVGGEIDRIEMK-L 143
DF G EL LD + + + + +K I E+EAF LK + + V + R+ K L
Sbjct: 538 DFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAED--LQFVASQFRRLHTKQL 595
Query: 144 RKKY 147
R K+
Sbjct: 596 RHKF 599
>sp|B4U738|RPOC_HYDS0 DNA-directed RNA polymerase subunit beta' OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=rpoC PE=3 SV=1
Length = 1563
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 100 DLNTMLEEVQNMKTIDEMEAFLLKHSENIVDMVGGEID--RIEMKLRK 145
D +LEE+ +K IDE++ FLLK + + + G +I+ IE+ +R+
Sbjct: 1391 DGTPLLEEILKIKGIDELQKFLLKEVQMVYKLQGVDINDKHIEIIIRQ 1438
>sp|Q9VR99|CATIN_DROME Cactin OS=Drosophila melanogaster GN=cactin PE=1 SV=3
Length = 720
Score = 30.0 bits (66), Expect = 6.3, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 37 EALVGRSIPDDYLDKINAELESDVMIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYL 96
E + + D +++ + E E D + V+ Q GN RY E DF GR +
Sbjct: 465 EEMETQDAEDPEVEEGSPEDEEDPLNELRKTVRLYQAGNYSPRYIREEDFTGRRAQNEDV 524
Query: 97 DKQDLNTMLEEVQNMKTIDEMEAFLLKHSENI 128
D+ + +L E ++ + + + L+ H E +
Sbjct: 525 DEPEAEGLLYEEEDDERRTQRQRLLILHPERV 556
>sp|Q8XBY1|CUSA_ECO57 Cation efflux system protein CusA OS=Escherichia coli O157:H7
GN=cusA PE=3 SV=1
Length = 1045
Score = 29.6 bits (65), Expect = 8.1, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 36/70 (51%)
Query: 72 QMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEVQNMKTIDEMEAFLLKHSENIVDM 131
Q G SL K+ +D +E S ++ + M+ ++T+D+ +LK SEN V +
Sbjct: 198 QYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPV 257
Query: 132 VGGEIDRIEM 141
++ +I++
Sbjct: 258 YLRDVAKIQV 267
>sp|Q5ZMW3|API5_CHICK Apoptosis inhibitor 5 OS=Gallus gallus GN=API5 PE=2 SV=1
Length = 523
Score = 29.6 bits (65), Expect = 8.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 40 VGRSIPDDYLDKINAELESDVMIRAIYDVKGIQM 73
+GR +PD K+NAE D IR Y +G+Q+
Sbjct: 353 LGRKLPDFLTAKLNAEKLKDFKIRLQYFARGLQV 386
>sp|Q5R644|API5_PONAB Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2 SV=1
Length = 504
Score = 29.6 bits (65), Expect = 8.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 40 VGRSIPDDYLDKINAELESDVMIRAIYDVKGIQM 73
+GR +PD K+NAE D IR Y +G+Q+
Sbjct: 353 LGRKLPDFLTAKLNAEKLKDFKIRLQYFARGLQV 386
>sp|O35841|API5_MOUSE Apoptosis inhibitor 5 OS=Mus musculus GN=Api5 PE=2 SV=2
Length = 504
Score = 29.6 bits (65), Expect = 8.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 40 VGRSIPDDYLDKINAELESDVMIRAIYDVKGIQM 73
+GR +PD K+NAE D IR Y +G+Q+
Sbjct: 353 LGRKLPDFLTAKLNAEKLKDFKIRLQYFARGLQV 386
>sp|Q9BZZ5|API5_HUMAN Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1 SV=3
Length = 524
Score = 29.6 bits (65), Expect = 8.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 40 VGRSIPDDYLDKINAELESDVMIRAIYDVKGIQM 73
+GR +PD K+NAE D IR Y +G+Q+
Sbjct: 353 LGRKLPDFLTAKLNAEKLKDFKIRLQYFARGLQV 386
>sp|B3EH20|HPRK_CHLL2 HPr kinase/phosphorylase OS=Chlorobium limicola (strain DSM 245 /
NBRC 103803) GN=hprK PE=3 SV=1
Length = 330
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 55 ELESDVMIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEV------ 108
+++++ IRAI D+K +Q+ L+ + E D++ R LD + + + EV
Sbjct: 226 DVKANFGIRAIRDIKDVQVVVELLEWNRETDYE-----RLGLDMKSIKILGVEVPLVQLP 280
Query: 109 ----QNMKTIDEMEA--FLLKHSENIV 129
+N+ I E+ A FLLKH N V
Sbjct: 281 IFPGKNIAVIIEVVALNFLLKHYSNYV 307
>sp|P31061|NOHA_ECOLI Putative prophage Qin DNA-packaging protein NU1 homolog
OS=Escherichia coli (strain K12) GN=nohA PE=5 SV=2
Length = 189
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 53 NAELESDVMIRAIYDVKGIQMGNSLIRYKAEVDFDGRELTRSYLDKQDLNTMLEEVQNMK 112
+AE+E++ + R +V+ ++ + ++++ LTR+ D Q+L + + ++
Sbjct: 54 DAEIENEKLRR---EVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVE 110
Query: 113 TIDEMEAFLLKHSENIVDMVGGEIDRIEMKLRKKYPDI--RHVDL 155
T AF I + +D I + +++++P++ RHVD
Sbjct: 111 T-----AFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDF 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.140 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,044,001
Number of Sequences: 539616
Number of extensions: 2344422
Number of successful extensions: 8230
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 8187
Number of HSP's gapped (non-prelim): 90
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)