BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1893
         (78 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6DCE3|ZNT9_XENLA Zinc transporter 9 OS=Xenopus laevis GN=slc30a9 PE=2 SV=1
          Length = 559

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
           EDAAAVL +++A SCMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct: 387 EDAAAVLGLVMAASCMGLTSLTGNPLYDSLGSLGVGTLLGAVSAFLIYTNTEALIGRSIQ 446

Query: 66  PDDYLAQKMLLQS 78
           PD       LL+S
Sbjct: 447 PDQVQRLTELLES 459


>sp|Q5PQZ3|ZNT9_DANRE Zinc transporter 9 OS=Danio rerio GN=slc30a9 PE=2 SV=1
          Length = 573

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           EDAAAVL V++A  CMGLT  TG+   D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct: 401 EDAAAVLGVVLAAGCMGLTSLTGNPYYDSLGSLGVGTLLGTVSAFLIYTNTEALLGRSIQ 460

Query: 67  DDYLAQKM 74
            +++ QK+
Sbjct: 461 AEHM-QKL 467


>sp|Q5IRJ6|ZNT9_MOUSE Zinc transporter 9 OS=Mus musculus GN=Slc30a9 PE=1 SV=2
          Length = 567

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
           ED AAVL V++A +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct: 395 EDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGVVSAFLIYTNTEALLGRSIQ 454

Query: 66  PDDYLAQKMLLQS 78
           P+       LL+S
Sbjct: 455 PEQVQRLTELLES 467


>sp|Q5R4H0|ZNT9_PONAB Zinc transporter 9 OS=Pongo abelii GN=SLC30A9 PE=2 SV=1
          Length = 569

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI 65
           ED AAVL V++A +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI
Sbjct: 397 EDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGMVSAFLIYTNTEALLGRSI 455


>sp|Q6PML9|ZNT9_HUMAN Zinc transporter 9 OS=Homo sapiens GN=SLC30A9 PE=1 SV=1
          Length = 568

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI 65
           ED AAVL V++A +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI
Sbjct: 396 EDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGMVSAFLIYTNTEALLGRSI 454


>sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2
           SV=1
          Length = 457

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%)

Query: 6   TEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI 65
           TED AAV  + +A + +     TG+ I D +GS +VG +LG VA F++  N  AL+GR++
Sbjct: 272 TEDGAAVAGLAIAAASLVAVRMTGNPIYDPIGSIVVGNLLGMVAIFLIQRNRHALIGRAM 331

Query: 66  PDDYLAQ 72
            D  +++
Sbjct: 332 DDQDMSK 338


>sp|Q3A5X3|CRCB_PELCD Protein CrcB homolog OS=Pelobacter carbinolicus (strain DSM 2380
          / Gra Bd 1) GN=crcB PE=3 SV=1
          Length = 123

 Score = 32.3 bits (72), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 23/33 (69%)

Query: 43 GILGCVAYFIVSSNIEALVGRSIPDDYLAQKML 75
          G LGC++ F+VS  + AL+GR++P   LA  ++
Sbjct: 10 GALGCLSRFMVSGWVYALIGRALPYGTLAVNVI 42


>sp|P61389|CRCB_GEOSL Protein CrcB homolog OS=Geobacter sulfurreducens (strain ATCC
          51573 / DSM 12127 / PCA) GN=crcB PE=3 SV=1
          Length = 140

 Score = 29.3 bits (64), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 41 VGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKML 75
          V G +GCVA ++++  + AL GR+ P   LA  ++
Sbjct: 25 VFGAVGCVARYLLAGGVYALAGRAFPWGTLAVNVI 59


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.136    0.387 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,697,449
Number of Sequences: 539616
Number of extensions: 869258
Number of successful extensions: 2563
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2554
Number of HSP's gapped (non-prelim): 13
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)