BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1896
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49415|SDC_DROME Syndecan OS=Drosophila melanogaster GN=Sdc PE=2 SV=2
Length = 399
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/57 (91%), Positives = 55/57 (96%), Gaps = 1/57 (1%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNS-NREFYA 101
AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYAL+EPKRSPA+NSY KN+ NREFYA
Sbjct: 343 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALDEPKRSPANNSYAKNANNREFYA 399
>sp|P50605|SDC_CAEEL Probable syndecan OS=Caenorhabditis elegans GN=sdn-1 PE=2 SV=1
Length = 288
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%), Gaps = 5/70 (7%)
Query: 34 ETIGDAYMVNCLAVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRS-P-ASNSY 91
ET+ + + A+ GG +V ++ AIL+V+F+V+R+RKKDEGSYAL+EPK++ P AS Y
Sbjct: 222 ETLANGFYA---AIAGGVLVAVITAILLVLFVVFRIRKKDEGSYALDEPKQARPYASYGY 278
Query: 92 MKNSNREFYA 101
K S +EFYA
Sbjct: 279 TKASTKEFYA 288
>sp|P26261|SDC3_CHICK Syndecan-3 OS=Gallus gallus GN=SDC3 PE=2 SV=2
Length = 405
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
Query: 45 LAVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMK-NSNREFYA 101
+AVI G VVG L A +VM ++YRM+KKDEGSY LEEPK+ A+ +Y K + EFYA
Sbjct: 350 IAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQ--ANVTYQKPDKQEEFYA 405
>sp|P26260|SDC1_RAT Syndecan-1 OS=Rattus norvegicus GN=Sdc1 PE=2 SV=2
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
VI G +VGL+ A+ +V F++YRM+KKDEGSY+LEEPK++ EFYA
Sbjct: 258 GVIAGGLVGLIFAVCLVAFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA 313
>sp|P18828|SDC1_MOUSE Syndecan-1 OS=Mus musculus GN=Sdc1 PE=1 SV=1
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
VI G +VGL+ A+ +V F++YRM+KKDEGSY+LEEPK++ EFYA
Sbjct: 256 GVIAGGLVGLIFAVCLVAFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA 311
>sp|Q6GR51|SDC2B_XENLA Syndecan-2-B OS=Xenopus laevis GN=sdc2-b PE=2 SV=1
Length = 190
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
AVI G +G L A+ +++ +VYRMRKKDEGSY L E R P+S Y K +EFYA
Sbjct: 137 AVIAGGGIGFLFAVFLILLLVYRMRKKDEGSYDLGE--RKPSSAVYQKAPTKEFYA 190
>sp|P49414|SDC2A_XENLA Syndecan-2-A OS=Xenopus laevis GN=sdc2-a PE=2 SV=2
Length = 191
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
AVI G +G L A+ +++ +VYRMRKKDEGSY L E R P+S Y K +EFYA
Sbjct: 138 AVIAGGGIGFLFAVFLILLLVYRMRKKDEGSYDLGE--RKPSSAVYQKAPTKEFYA 191
>sp|P16065|GCY_STRPU Speract receptor OS=Strongylocentrotus purpuratus PE=2 SV=1
Length = 1125
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/39 (74%), Positives = 31/39 (79%)
Query: 4 ATGASMVVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
A+ VVN LNDLYTLFD II YDVYKVETIGDAYM+
Sbjct: 929 ASTPIQVVNLLNDLYTLFDAIISNYDVYKVETIGDAYML 967
>sp|P34740|SDC1_MESAU Syndecan-1 OS=Mesocricetus auratus GN=SDC1 PE=2 SV=1
Length = 309
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
VI G +VGL+ A+ +V F++YRM+KKDEGSY+LEEPK++ EFYA
Sbjct: 254 GVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA 309
>sp|P18827|SDC1_HUMAN Syndecan-1 OS=Homo sapiens GN=SDC1 PE=1 SV=3
Length = 310
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
VI G +VGL+ A+ +V F++YRM+KKDEGSY+LEEPK++ EFYA
Sbjct: 255 GVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA 310
>sp|P47951|SDC1_CRIGR Syndecan-1 OS=Cricetulus griseus GN=SDC1 PE=2 SV=1
Length = 309
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
VI G +VGL+ A+ +V F++YRM+KKDEGSY+LEEPK++ EFYA
Sbjct: 254 GVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA 309
>sp|Q08DZ5|SDC1_BOVIN Syndecan-1 OS=Bos taurus GN=SDC1 PE=2 SV=1
Length = 311
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
VI G +VGL+ A+ +V F++YRM+KKDEGSY+LEEPK++ EFYA
Sbjct: 256 GVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA 311
>sp|P52785|GUC2E_MOUSE Guanylyl cyclase GC-E OS=Mus musculus GN=Gucy2e PE=2 SV=2
Length = 1108
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 904 VVDLLNDLYTLFDAIIGAHDVYKVETIGDAYMV 936
>sp|P51842|GUC2F_RAT Retinal guanylyl cyclase 2 OS=Rattus norvegicus GN=Gucy2f PE=2 SV=1
Length = 1108
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 905 VVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMV 937
>sp|Q5SDA5|GUC2F_MOUSE Retinal guanylyl cyclase 2 OS=Mus musculus GN=Gucy2f PE=2 SV=1
Length = 1108
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 905 VVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMV 937
>sp|P51841|GUC2F_HUMAN Retinal guanylyl cyclase 2 OS=Homo sapiens GN=GUCY2F PE=2 SV=2
Length = 1108
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 905 VVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMV 937
>sp|O02740|GUC2F_BOVIN Retinal guanylyl cyclase 2 OS=Bos taurus GN=GUCY2F PE=2 SV=1
Length = 1103
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 905 VVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMV 937
>sp|P51840|GUC2E_RAT Guanylyl cyclase GC-E OS=Rattus norvegicus GN=Gucy2e PE=1 SV=1
Length = 1108
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 904 VVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMV 936
>sp|Q02846|GUC2D_HUMAN Retinal guanylyl cyclase 1 OS=Homo sapiens GN=GUCY2D PE=1 SV=2
Length = 1103
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 901 VVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMV 933
>sp|O19179|GUC2D_CANFA Retinal guanylyl cyclase 1 OS=Canis familiaris GN=GUCY2D PE=2 SV=1
Length = 1109
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 905 VVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMV 937
>sp|P55203|GUC2D_BOVIN Retinal guanylyl cyclase 1 OS=Bos taurus GN=GUCY2D PE=1 SV=1
Length = 1110
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLYTLFD II +DVYKVETIGDAYMV
Sbjct: 906 VVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMV 938
>sp|P51839|GUC2D_RAT Olfactory guanylyl cyclase GC-D OS=Rattus norvegicus GN=Gucy2d PE=2
SV=1
Length = 1110
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV FLNDLYT+FD ++ +DVYKVETIGDAYMV
Sbjct: 914 VVGFLNDLYTMFDAVLDSHDVYKVETIGDAYMV 946
>sp|P16067|ANPRB_RAT Atrial natriuretic peptide receptor 2 OS=Rattus norvegicus GN=Npr2
PE=1 SV=1
Length = 1047
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLYT FD II +DVYKVETIGDAYMV
Sbjct: 882 VVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMV 914
>sp|Q6VVW5|ANPRB_MOUSE Atrial natriuretic peptide receptor 2 OS=Mus musculus GN=Npr2 PE=2
SV=2
Length = 1047
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLYT FD II +DVYKVETIGDAYMV
Sbjct: 882 VVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMV 914
>sp|P20594|ANPRB_HUMAN Atrial natriuretic peptide receptor 2 OS=Homo sapiens GN=NPR2 PE=1
SV=1
Length = 1047
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLYT FD II +DVYKVETIGDAYMV
Sbjct: 882 VVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMV 914
>sp|P46197|ANPRB_BOVIN Atrial natriuretic peptide receptor 2 OS=Bos taurus GN=NPR2 PE=2
SV=1
Length = 1047
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLYT FD II +DVYKVETIGDAYMV
Sbjct: 882 VVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMV 914
>sp|P34900|SDC2_RAT Syndecan-2 OS=Rattus norvegicus GN=Sdc2 PE=2 SV=2
Length = 201
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 22 DRIIKGYDVYKVETIGDAYMVNCL--AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYAL 79
D +K DVY + + + + AVI G V+G L AI +++ +VYRMRKKDEGSY L
Sbjct: 122 DPAVKSTDVYTEKHSDNLFKRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDL 181
Query: 80 EEPKRSPASNSYMKNSNREFYA 101
E R P+S +Y K +EFYA
Sbjct: 182 GE--RKPSSAAYQKAPTKEFYA 201
>sp|P55202|ANPRB_ANGJA Atrial natriuretic peptide receptor 2 OS=Anguilla japonica GN=npr2
PE=2 SV=1
Length = 1050
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLYT FD II +DVYKVETIGDAYMV
Sbjct: 886 VVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMV 918
>sp|Q6TL19|GUC2G_MOUSE Guanylate cyclase 2G OS=Mus musculus GN=Gucy2g PE=1 SV=1
Length = 1100
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLY+LFD I+ +DVYKVETIGDAYMV
Sbjct: 922 VVKLLNDLYSLFDHTIQSHDVYKVETIGDAYMV 954
>sp|P18910|ANPRA_RAT Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus GN=Npr1
PE=1 SV=1
Length = 1057
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLYT FD +I +DVYKVETIGDAYMV
Sbjct: 893 VVTLLNDLYTCFDAVIDNFDVYKVETIGDAYMV 925
>sp|P18293|ANPRA_MOUSE Atrial natriuretic peptide receptor 1 OS=Mus musculus GN=Npr1 PE=2
SV=2
Length = 1057
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLYT FD +I +DVYKVETIGDAYMV
Sbjct: 893 VVTLLNDLYTCFDAVIDNFDVYKVETIGDAYMV 925
>sp|P16066|ANPRA_HUMAN Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1
SV=1
Length = 1061
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLYT FD +I +DVYKVETIGDAYMV
Sbjct: 897 VVTLLNDLYTCFDAVIDNFDVYKVETIGDAYMV 929
>sp|P55205|GUC2G_RAT Guanylate cyclase 2G OS=Rattus norvegicus GN=Gucy2g PE=2 SV=2
Length = 1100
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLY+LFD I+ +DVYKVETIGDAYMV
Sbjct: 922 VVKLLNDLYSLFDHTIQTHDVYKVETIGDAYMV 954
>sp|P43407|SDC2_MOUSE Syndecan-2 OS=Mus musculus GN=Sdc2 PE=1 SV=1
Length = 202
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 25 IKGYDVYKVETIGDAYMVNCL--AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEP 82
IK DVY + + + + AVI G V+G L AI +++ +VYRMRKKDEGSY L E
Sbjct: 126 IKSTDVYTEKHSDNLFKRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGE- 184
Query: 83 KRSPASNSYMKNSNREFYA 101
R P+S +Y K +EFYA
Sbjct: 185 -RKPSSAAYQKAPTKEFYA 202
>sp|Q58DD4|SDC2_BOVIN Syndecan-2 OS=Bos taurus GN=SDC2 PE=2 SV=1
Length = 202
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
AVI G V+G L AI +++ +VYRMRKKDEGSY L E R P+S +Y K +EFYA
Sbjct: 149 AVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGE--RKPSSAAYQKAPTKEFYA 202
>sp|P34741|SDC2_HUMAN Syndecan-2 OS=Homo sapiens GN=SDC2 PE=1 SV=2
Length = 201
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
AVI G V+G L AI +++ +VYRMRKKDEGSY L E R P+S +Y K +EFYA
Sbjct: 148 AVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGE--RKPSSAAYQKAPTKEFYA 201
>sp|Q07553|GCY3E_DROME Guanylate cyclase 32E OS=Drosophila melanogaster GN=Gyc32E PE=1
SV=4
Length = 1163
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 25/33 (75%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LND YT D II YDVYKVETIGDAYMV
Sbjct: 894 VVEMLNDWYTCCDSIISNYDVYKVETIGDAYMV 926
>sp|P25092|GUC2C_HUMAN Heat-stable enterotoxin receptor OS=Homo sapiens GN=GUCY2C PE=1
SV=2
Length = 1073
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LND+Y FD I+ +DVYKVETIGDAYMV
Sbjct: 845 VVDMLNDIYKSFDHIVDHHDVYKVETIGDAYMV 877
>sp|P49416|SDC4_CHICK Syndecan-4 OS=Gallus gallus GN=SDC4 PE=1 SV=1
Length = 197
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
A+I G VGLL A+ +++ +VYRM+KKDEGSY L + P Y K EFYA
Sbjct: 148 ALIAGGAVGLLFAVFLILLLVYRMKKKDEGSYDL---GKKPI---YKKAPTNEFYA 197
>sp|P55204|GUC2C_PIG Heat-stable enterotoxin receptor OS=Sus scrofa GN=GUCY2C PE=2 SV=2
Length = 1073
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LND+Y FD I+ +DVYKVETIGDAYMV
Sbjct: 845 VVDMLNDIYKSFDHILDHHDVYKVETIGDAYMV 877
>sp|P23897|GUC2C_RAT Heat-stable enterotoxin receptor OS=Rattus norvegicus GN=Gucy2c
PE=2 SV=2
Length = 1072
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LND+Y FD+I+ +DVYKVETIGDAY+V
Sbjct: 844 VVDMLNDIYKSFDQIVDHHDVYKVETIGDAYVV 876
>sp|Q3UWA6|GUC2C_MOUSE Heat-stable enterotoxin receptor OS=Mus musculus GN=Gucy2c PE=2
SV=1
Length = 1072
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LND+Y FD+I+ +DVYKVETIGDAY+V
Sbjct: 844 VVDMLNDIYKSFDQIVDHHDVYKVETIGDAYVV 876
>sp|O02298|GCY35_CAEEL Soluble guanylate cyclase gcy-35 OS=Caenorhabditis elegans
GN=gcy-35 PE=1 SV=3
Length = 688
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV LNDLY FDR++ +D YKVETIGDAYM+
Sbjct: 445 VVTLLNDLYLRFDRLVGLHDAYKVETIGDAYMI 477
>sp|P22717|GCYB2_RAT Guanylate cyclase soluble subunit beta-2 OS=Rattus norvegicus
GN=Gucy1b2 PE=2 SV=1
Length = 682
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 26/32 (81%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYM 41
+VN LN +Y+ FDR+ +DVYKVETIGDAYM
Sbjct: 429 IVNMLNSMYSKFDRLTSVHDVYKVETIGDAYM 460
>sp|P33671|SDC3_RAT Syndecan-3 OS=Rattus norvegicus GN=Sdc3 PE=2 SV=3
Length = 442
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 58 AILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMK-NSNREFYA 101
A +V ++YRM+KKDEGSY LEEPK+ AS +Y K + EFYA
Sbjct: 400 AAFLVTLLIYRMKKKDEGSYTLEEPKQ--ASVTYQKPDKQEEFYA 442
>sp|Q64519|SDC3_MOUSE Syndecan-3 OS=Mus musculus GN=Sdc3 PE=2 SV=2
Length = 442
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 58 AILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMK-NSNREFYA 101
A +V ++YRM+KKDEGSY LEEPK+ AS +Y K + EFYA
Sbjct: 400 AAFLVTLLIYRMKKKDEGSYTLEEPKQ--ASVTYQKPDKQEEFYA 442
>sp|O75056|SDC3_HUMAN Syndecan-3 OS=Homo sapiens GN=SDC3 PE=1 SV=2
Length = 442
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 58 AILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMK-NSNREFYA 101
A +V ++YRM+KKDEGSY LEEPK+ AS +Y K + EFYA
Sbjct: 400 AAFLVTLLIYRMKKKDEGSYTLEEPKQ--ASVTYQKPDKQEEFYA 442
>sp|O35988|SDC4_MOUSE Syndecan-4 OS=Mus musculus GN=Sdc4 PE=1 SV=1
Length = 198
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
A+I G VVG+L A+ +++ +VYRM+KKDEGSY L + P Y K EFYA
Sbjct: 149 ALIVGGVVGILFAVFLILLLVYRMKKKDEGSYDL---GKKPI---YKKAPTNEFYA 198
>sp|P70106|GUC2C_CAVPO Heat-stable enterotoxin receptor OS=Cavia porcellus GN=GUCY2C PE=2
SV=1
Length = 1076
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 10 VVNFLNDLYTLFDRIIKGYDVYKVETIGDAYMV 42
VV+ LNDLY FD+I+ +DV+KVETIGDAY+V
Sbjct: 848 VVDMLNDLYKSFDQIVDHHDVHKVETIGDAYVV 880
>sp|P34901|SDC4_RAT Syndecan-4 OS=Rattus norvegicus GN=Sdc4 PE=1 SV=1
Length = 202
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Query: 46 AVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALEEPKRSPASNSYMKNSNREFYA 101
A+I G VVG+L A+ +++ +VYRM+KKDEGSY L + P Y K EFYA
Sbjct: 153 ALIVGGVVGILFAVFLILLLVYRMKKKDEGSYDL---GKKPI---YKKAPTNEFYA 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,255,344
Number of Sequences: 539616
Number of extensions: 1247231
Number of successful extensions: 5339
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5156
Number of HSP's gapped (non-prelim): 167
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)