BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1897
(473 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VYV5|FUT8_DROME Alpha-(1,6)-fucosyltransferase OS=Drosophila melanogaster GN=FucT6
PE=1 SV=1
Length = 619
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/473 (45%), Positives = 308/473 (65%), Gaps = 13/473 (2%)
Query: 5 PNVLDLKTNKPYASKHRHILNNIEEFWFYVQSEVRKLKKSNAV---------DVDKILDL 55
P+ + + + Y R I NI E W + SE+ K++K+ A ++++L
Sbjct: 145 PDHGEFEPSLEYEFTRRRIQTNIGEIWNFFSSELGKVRKAVAAGHASADLEESINQVLLQ 204
Query: 56 TSQFKRSLMTDMEELGTLAGGDTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQIN 115
++ KRSL++DME + G + ++ R L +LVQ RL H+QNP DC+ ARK+ C++N
Sbjct: 205 GAEHKRSLLSDMERMRQSDGYEAWRHKEARDLSDLVQRRLHHLQNPSDCQNARKLVCKLN 264
Query: 116 WACGFGCQLHHVTYCLIIAYATNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVI 175
CG+GCQLHHV YC I+AYAT RTL+L S GW YH GGWEE+F+P+S +C A +
Sbjct: 265 KGCGYGCQLHHVVYCFIVAYATERTLILKSRGWRYHKGGWEEVFQPVSNSCHDAGTANTY 324
Query: 176 YWPDHKPDKQIIKLASQTYSLSGPGFIPRAVPQDIAQEL--IHGEPIVWWVGQIVKYIFK 233
WP KP+ Q++ L + P ++P AVP+D+A L +HG+PIVWWVGQ +KY+ +
Sbjct: 325 NWPG-KPNTQVLVLPIIDSLMPRPPYLPLAVPEDLAPRLKRLHGDPIVWWVGQFLKYLLR 383
Query: 234 PNAKVRAMLSHHAQQIGFSHPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQV 292
P R L+ + +G+ P+VGVH+RRTDK G+EAA H + EYM +VE+YY L +
Sbjct: 384 PQPTTRDFLTSGMRNLGWERPIVGVHVRRTDKVGTEAACHSVEEYMTYVEDYYRTLEVNG 443
Query: 293 NVTERKVYVATDEKGVIMEIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFL 352
+ R++++A+D+ VI E R+KYP Y I+GD AS RY+ L GII D++ L
Sbjct: 444 STVARRIFLASDDAQVIEEARRKYPQYQIIGDPEVARMASVSTRYTDTALNGIILDIHLL 503
Query: 353 SHSDYLVCTFSSQICRIAYELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQT 412
S SD+LVCTFSSQ+CR+AYE++ T + DA+ FKSLDDI+++ GQ + + V+ H P+T
Sbjct: 504 SMSDHLVCTFSSQVCRVAYEIMQTMYPDAAHRFKSLDDIYYYGGQNAHNRRVVIAHKPRT 563
Query: 413 ADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTY 465
+ ++LRVGD V AGNHWDG S+G N RTN+ GL+PSFKV +V+T K P Y
Sbjct: 564 HEDLQLRVGDLVSVAGNHWDGNSKGKNTRTNQGGLFPSFKVEEKVDTAKLPLY 616
>sp|Q6EV77|FUT8_PANTR Alpha-(1,6)-fucosyltransferase OS=Pan troglodytes GN=FUT8 PE=2 SV=1
Length = 575
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/459 (46%), Positives = 304/459 (66%), Gaps = 11/459 (2%)
Query: 21 RHILNNIEEFWFYVQSEVRKLKKSNAVDVDK-----ILDLTSQFKRSLMTDMEELGTLAG 75
R I N +E WF++QSE++KLK ++ + +LDL +RS+MTD+ L G
Sbjct: 117 RRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDL-GHHERSIMTDLYYLSQTDG 175
Query: 76 GDTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAY 135
E++ + L ELVQ R+ ++QNP+DC A+K+ C IN CG+GCQLHHV YC +IAY
Sbjct: 176 AGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAY 235
Query: 136 ATNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQT 193
T RTL+L+S W Y +GGWE +F P+S+TC + S +W DK Q+++L
Sbjct: 236 GTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVD 295
Query: 194 YSLSGPGFIPRAVPQDIAQELI--HGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGF 251
P ++P AVP+D+A L+ HG+P VWWV Q VKY+ +P + + +++GF
Sbjct: 296 SLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGF 355
Query: 252 SHPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIM 310
HPV+GVH+RRTDK G+EAA HPI EYM HVEE++ L+ ++ V +++VY+ATD+ ++
Sbjct: 356 KHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLK 415
Query: 311 EIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIA 370
E + KYP Y + D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+A
Sbjct: 416 EAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVA 475
Query: 371 YELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNH 430
YE++ T H DAS NF SLDDI++F GQ + Q+A+ H P+TAD+I + GD + AGNH
Sbjct: 476 YEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNH 535
Query: 431 WDGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEVK 469
WDG+S+G N + R GLYPS+KV ++ET K+PTYPE +
Sbjct: 536 WDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAE 574
>sp|Q9BYC5|FUT8_HUMAN Alpha-(1,6)-fucosyltransferase OS=Homo sapiens GN=FUT8 PE=1 SV=2
Length = 575
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/459 (46%), Positives = 304/459 (66%), Gaps = 11/459 (2%)
Query: 21 RHILNNIEEFWFYVQSEVRKLKKSNAVDVDK-----ILDLTSQFKRSLMTDMEELGTLAG 75
R I N +E WF++QSE++KLK ++ + +LDL +RS+MTD+ L G
Sbjct: 117 RRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDL-GHHERSIMTDLYYLSQTDG 175
Query: 76 GDTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAY 135
E++ + L ELVQ R+ ++QNP+DC A+K+ C IN CG+GCQLHHV YC +IAY
Sbjct: 176 AGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAY 235
Query: 136 ATNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQT 193
T RTL+L+S W Y +GGWE +F P+S+TC + S +W DK Q+++L
Sbjct: 236 GTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVD 295
Query: 194 YSLSGPGFIPRAVPQDIAQELI--HGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGF 251
P ++P AVP+D+A L+ HG+P VWWV Q VKY+ +P + + +++GF
Sbjct: 296 SLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGF 355
Query: 252 SHPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIM 310
HPV+GVH+RRTDK G+EAA HPI EYM HVEE++ L+ ++ V +++VY+ATD+ ++
Sbjct: 356 KHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLK 415
Query: 311 EIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIA 370
E + KYP Y + D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+A
Sbjct: 416 EAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVA 475
Query: 371 YELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNH 430
YE++ T H DAS NF SLDDI++F GQ + Q+A+ H P+TAD+I + GD + AGNH
Sbjct: 476 YEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNH 535
Query: 431 WDGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEVK 469
WDG+S+G N + R GLYPS+KV ++ET K+PTYPE +
Sbjct: 536 WDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAE 574
>sp|Q659X0|FUT8_CANFA Alpha-(1,6)-fucosyltransferase OS=Canis familiaris GN=FUT8 PE=2
SV=1
Length = 575
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/458 (46%), Positives = 303/458 (66%), Gaps = 9/458 (1%)
Query: 21 RHILNNIEEFWFYVQSEVRKLK--KSNAVD--VDKILDLTSQFKRSLMTDMEELGTLAGG 76
R I N +E WF++QSE++KLK + N + D+ L +RS+MTD+ L G
Sbjct: 117 RRIENGAKELWFFLQSELKKLKNLEGNVLQRHADEFLSDLGHHERSIMTDLYYLSQTDGA 176
Query: 77 DTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAYA 136
E++ + L ELVQ R+ ++QNP+DC A+K+ C IN CG+GCQLHHV YC +IAY
Sbjct: 177 GDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYG 236
Query: 137 TNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQTY 194
T RTL+L+S W Y +GGWE +F P+++TC + S +W DK Q+++L
Sbjct: 237 TQRTLILESQNWRYATGGWETVFRPVNETCTDRSGTSTGHWSGEVKDKNVQVVELPIVDS 296
Query: 195 SLSGPGFIPRAVPQDIAQELI--HGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGFS 252
P ++P AVP+D+A L+ HG+P VWWV Q VKY+ +P + + +++GF+
Sbjct: 297 LHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFN 356
Query: 253 HPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIME 311
PV+GVH+RRTDK G+EAA HPI EYM HVEE++ L+ ++ V +R+VY+ATD+ ++ E
Sbjct: 357 IPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKRRVYLATDDPSLLKE 416
Query: 312 IRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIAY 371
+ KYP Y + D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+AY
Sbjct: 417 AKTKYPTYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAY 476
Query: 372 ELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHW 431
E++ T H DAS NF SLDDI++F GQ + Q+A+ H P+TAD+I + GD + AGNHW
Sbjct: 477 EIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYPHQPRTADEIPMEPGDIIGVAGNHW 536
Query: 432 DGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEVK 469
DG+S+G N + R GLYPS+KV ++ET K+PTYPE +
Sbjct: 537 DGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAE 574
>sp|Q6NVP8|FUT8_XENTR Alpha-(1,6)-fucosyltransferase OS=Xenopus tropicalis GN=fut8 PE=2
SV=1
Length = 578
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/459 (45%), Positives = 305/459 (66%), Gaps = 11/459 (2%)
Query: 21 RHILNNIEEFWFYVQSEVRKLKKSNAVDVDK-----ILDLTSQFKRSLMTDMEELGTLAG 75
R I N +EFW++VQSEV+KLK + ++ + I+D+ Q +RS+MTD+ L G
Sbjct: 120 RAIENGAKEFWYFVQSEVKKLKHLDRNELQRHVDEIIIDMGHQ-QRSVMTDLYYLSQTDG 178
Query: 76 GDTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAY 135
ER+ + L +LVQ R+ ++QNP+DC A+K+ C IN CG+GCQLHHV YC +IAY
Sbjct: 179 AGDWREREAKDLTDLVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAY 238
Query: 136 ATNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQT 193
T RTL+L+S W Y +GGWE +F+P+S+TC + S +W DK Q+++L
Sbjct: 239 GTQRTLILESQSWRYATGGWETVFKPVSETCTDRSGSSTGHWSGEANDKNVQVVELPIVD 298
Query: 194 YSLSGPGFIPRAVPQDIAQELI--HGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGF 251
P ++P VP+D+A LI HG+P VWWV Q VKY+ +P + + +++GF
Sbjct: 299 SLHPRPPYLPLGVPEDLADRLIRLHGDPAVWWVSQFVKYLIRPQPWLEKEIEESTKKLGF 358
Query: 252 SHPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIM 310
HPV+GVH+RRTDK G+EAA HPI EYM HVEE++ L+ ++ + +++VY+ATD+ ++
Sbjct: 359 KHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQIDKKRVYLATDDPTLLQ 418
Query: 311 EIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIA 370
E + KYP Y + D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+A
Sbjct: 419 EAKAKYPQYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVA 478
Query: 371 YELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNH 430
YE++ T H DAS +F SLDDI++F GQ + QLA+ H P+ A++I L GD + AGNH
Sbjct: 479 YEIMQTLHPDASAHFHSLDDIYYFGGQNAHNQLAIYPHQPRNAEEIPLEPGDIIGVAGNH 538
Query: 431 WDGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEVK 469
WDG+S+G N + R GLYPS+KV ++ET K+PTY E +
Sbjct: 539 WDGYSKGINRKLGRTGLYPSYKVKEKIETVKYPTYQEAE 577
>sp|Q5NVB3|FUT8_PONAB Alpha-(1,6)-fucosyltransferase OS=Pongo abelii GN=FUT8 PE=2 SV=1
Length = 574
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/459 (46%), Positives = 304/459 (66%), Gaps = 12/459 (2%)
Query: 21 RHILNNIEEFWFYVQSEVRKLKKSNAVDVDK-----ILDLTSQFKRSLMTDMEELGTLAG 75
R I N +E WF++QSE++KLK ++ + +LDL +RS+MTD+ L G
Sbjct: 117 RRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDL-GHHERSIMTDLYYLSQTDG 175
Query: 76 GDTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAY 135
E++ + L ELVQ R+ ++QNP+DC A+K+ C IN CG+GCQLHHV YC +IAY
Sbjct: 176 AGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAY 235
Query: 136 ATNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQT 193
T RTL+L+S W Y +GGWE +F P+S+TC + S +W DK Q+++L
Sbjct: 236 GTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVD 295
Query: 194 YSLSGPGFIPRAVPQDIAQELI--HGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGF 251
P ++P AVP+D+A L+ HG+P VWWV Q VKY+ +P + + +++GF
Sbjct: 296 SLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATRKLGF 355
Query: 252 SHPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIM 310
HPV+GVH+RRTDK G+EAA HPI EYM HVEE++ L+ ++ V +++VY+ATD+ ++
Sbjct: 356 KHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLK 415
Query: 311 EIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIA 370
E + KYP Y I D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+A
Sbjct: 416 EAKTKYPNYFI-SDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVA 474
Query: 371 YELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNH 430
YE++ T H DAS NF SLDDI++F GQ + Q+A+ H P+TAD+I + GD + AGNH
Sbjct: 475 YEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNH 534
Query: 431 WDGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEVK 469
WDG+S+G N + R GLYPS+KV ++ET K+PTYPE +
Sbjct: 535 WDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAE 573
>sp|Q6EV76|FUT8_RAT Alpha-(1,6)-fucosyltransferase OS=Rattus norvegicus GN=Fut8 PE=2
SV=1
Length = 575
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/458 (45%), Positives = 301/458 (65%), Gaps = 9/458 (1%)
Query: 21 RHILNNIEEFWFYVQSEVRKLKKSNAVDV----DKILDLTSQFKRSLMTDMEELGTLAGG 76
R I N +E WF++QSE++KLK ++ D+IL +RS+MTD+ L G
Sbjct: 117 RRIENGAKELWFFLQSELKKLKHLEGNELQRHADEILLDLGHHERSIMTDLYYLSQTDGA 176
Query: 77 DTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAYA 136
E++ + L ELVQ R+ ++QNP+DC ARK+ C IN CG+GCQLHHV YC +IAY
Sbjct: 177 GDWREKEAKDLTELVQRRITYLQNPKDCSKARKLVCNINKGCGYGCQLHHVVYCFMIAYG 236
Query: 137 TNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQTY 194
T RTL+L+S W Y +GGWE +F P+S+TC + S +W DK Q+++L
Sbjct: 237 TQRTLILESQNWRYATGGWETVFRPVSETCTDRSGLSTGHWSGEVNDKNIQVVELPIVDS 296
Query: 195 SLSGPGFIPRAVPQDIAQELI--HGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGFS 252
P ++P AVP+D+A L+ HG+P VWWV Q VKY+ +P + + +++GF
Sbjct: 297 LHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFK 356
Query: 253 HPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIME 311
HPV+GVH+RRTDK G+EAA HPI EYM HVEE++ L+ ++ V +++VY+ATD+ ++ E
Sbjct: 357 HPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPALLKE 416
Query: 312 IRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIAY 371
+ KY Y + D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+AY
Sbjct: 417 AKTKYSNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAY 476
Query: 372 ELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHW 431
E++ T H DAS NF SLDDI++F GQ + Q+AV H P+T ++I + GD + AGNHW
Sbjct: 477 EIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAVYPHKPRTDEEIPMEPGDIIGVAGNHW 536
Query: 432 DGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEVK 469
DG+S+G N + + GLYPS+KV ++ET K+PTYPE +
Sbjct: 537 DGYSKGVNRKLGKTGLYPSYKVREKIETVKYPTYPEAE 574
>sp|Q9WTS2|FUT8_MOUSE Alpha-(1,6)-fucosyltransferase OS=Mus musculus GN=Fut8 PE=2 SV=2
Length = 575
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/458 (45%), Positives = 301/458 (65%), Gaps = 9/458 (1%)
Query: 21 RHILNNIEEFWFYVQSEVRKLKKSNAVDV----DKILDLTSQFKRSLMTDMEELGTLAGG 76
R I N +E WF++QSE++KLK ++ D+IL +RS+MTD+ L G
Sbjct: 117 RRIENGAKELWFFLQSELKKLKHLEGNELQRHADEILLDLGHHERSIMTDLYYLSQTDGA 176
Query: 77 DTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAYA 136
E++ + L ELVQ R+ ++QNP+DC ARK+ C IN CG+GCQLHHV YC +IAY
Sbjct: 177 GDWREKEAKDLTELVQRRITYLQNPKDCSKARKLVCNINKGCGYGCQLHHVVYCFMIAYG 236
Query: 137 TNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQTY 194
T RTL+L+S W Y +GGWE +F P+S+TC + S +W DK Q+++L
Sbjct: 237 TQRTLILESQNWRYATGGWETVFRPVSETCTDRSGLSTGHWSGEVNDKNIQVVELPIVDS 296
Query: 195 SLSGPGFIPRAVPQDIAQEL--IHGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGFS 252
P ++P AVP+D+A L +HG+P VWWV Q VKY+ +P + + +++GF
Sbjct: 297 LHPRPPYLPLAVPEDLADRLLRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFK 356
Query: 253 HPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIME 311
HPV+GVH+RRTDK G+EAA HPI EYM HVEE++ L+ ++ V +++VY+ATD+ ++ E
Sbjct: 357 HPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPTLLKE 416
Query: 312 IRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIAY 371
+ KY Y + D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+AY
Sbjct: 417 AKTKYSNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAY 476
Query: 372 ELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHW 431
E++ T H DAS NF SLDDI++F GQ + Q+AV H P+T ++I + GD + AGNHW
Sbjct: 477 EIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAVYPHKPRTEEEIPMEPGDIIGVAGNHW 536
Query: 432 DGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEVK 469
DG+S+G N + + GLYPS+KV ++ET K+PTYPE +
Sbjct: 537 DGYSKGINRKLGKTGLYPSYKVREKIETVKYPTYPEAE 574
>sp|Q9N0W2|FUT8_BOVIN Alpha-(1,6)-fucosyltransferase OS=Bos taurus GN=FUT8 PE=2 SV=1
Length = 575
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/458 (45%), Positives = 298/458 (65%), Gaps = 9/458 (1%)
Query: 21 RHILNNIEEFWFYVQSEVRKLKKSNAVDV----DKILDLTSQFKRSLMTDMEELGTLAGG 76
R I N +E WF++QSE++KLK ++ D+ L +RS+MTD+ L G
Sbjct: 117 RRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLSDLGHHERSIMTDLYYLSQTDGA 176
Query: 77 DTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAYA 136
E++ + L ELVQ R+ ++QNP+DC A+K+ C IN CG+GCQLHHV YC +IAY
Sbjct: 177 GDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYG 236
Query: 137 TNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQTY 194
T RTL+L+S W Y +GGWE +F P+S+TC + +W DK Q+++L
Sbjct: 237 TQRTLILESHNWRYATGGWETVFRPVSETCTDRSGVYTGHWSGEIKDKNVQVVELPIVDS 296
Query: 195 SLSGPGFIPRAVPQDIAQELI--HGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGFS 252
P ++P AVP+D+A L+ HG+P VWWV Q VKY+ +P + + +++GF
Sbjct: 297 LHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFK 356
Query: 253 HPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIME 311
HPV+GVH+RRTDK G+EAA HPI EYM HVEE++ L+ ++ V +++VY+ATD+ ++ E
Sbjct: 357 HPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKE 416
Query: 312 IRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIAY 371
+ KYP Y + D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+AY
Sbjct: 417 AKTKYPHYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAY 476
Query: 372 ELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHW 431
E++ T H DAS NF SLDDI++F GQ + Q+A+ H P+TAD+I + GD + AGNHW
Sbjct: 477 EIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYPHEPRTADEIPMEPGDIIGVAGNHW 536
Query: 432 DGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEVK 469
DG+S+G N + R GLYPS+KV ++ET K P PE +
Sbjct: 537 DGYSKGVNRKLGRTGLYPSYKVREKIETVKVPHVPEAE 574
>sp|P79282|FUT8_PIG Alpha-(1,6)-fucosyltransferase OS=Sus scrofa GN=FUT8 PE=1 SV=1
Length = 575
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/457 (44%), Positives = 295/457 (64%), Gaps = 9/457 (1%)
Query: 21 RHILNNIEEFWFYVQSEVRKLKKSNAVDV----DKILDLTSQFKRSLMTDMEELGTLAGG 76
R I N +E WF++QSE++KLK ++ D+ L +RS+MTD+ L G
Sbjct: 117 RRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLSDLGHHERSIMTDLYYLSQTDGA 176
Query: 77 DTLAERQNRRLGELVQARLRHIQNPRDCKTARKVSCQINWACGFGCQLHHVTYCLIIAYA 136
E++ + L ELVQ R+ ++QNP+DC A+K+ C IN CG+GCQLHHV YC +IAY
Sbjct: 177 GDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYG 236
Query: 137 TNRTLVLDSTGWNYHSGGWEEMFEPLSQTCRTATEGSVIYWPDHKPDK--QIIKLASQTY 194
T RTL L+S W Y +GGWE +F P+S+TC + S +W DK Q+++L
Sbjct: 237 TQRTLALESHNWRYATGGWETVFRPVSETCTDRSGSSTGHWSGEVKDKNVQVVELPIVDS 296
Query: 195 SLSGPGFIPRAVPQDIAQELI--HGEPIVWWVGQIVKYIFKPNAKVRAMLSHHAQQIGFS 252
P ++P AVP+D+A L+ HG+P VWWV Q VKY+ +P + + +++GF
Sbjct: 297 VHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFK 356
Query: 253 HPVVGVHIRRTDK-GSEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIME 311
HPV+GVH+RRTDK G+EAA HPI EY HVEE + L+ ++ V +++VY+ATD+ ++ E
Sbjct: 357 HPVIGVHVRRTDKVGAEAAFHPIEEYTVHVEEDFQLLARRMQVDKKRVYLATDDPALLKE 416
Query: 312 IRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSHSDYLVCTFSSQICRIAY 371
+ KYP+Y + D S +A RY+ L G+I D++FLS +D+LVCTFSSQ+CR+AY
Sbjct: 417 AKTKYPSYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAY 476
Query: 372 ELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHW 431
E++ H DAS NF+SLDDI++F G + Q+A+ H P+T +I + GD + AGNHW
Sbjct: 477 EIMQALHPDASANFRSLDDIYYFGGPNAHNQIAIYPHQPRTEGEIPMEPGDIIGVAGNHW 536
Query: 432 DGFSRGTNLRTNRHGLYPSFKVISRVETYKFPTYPEV 468
DG+ +G N + R GLYPS+KV ++ET K+PTYPE
Sbjct: 537 DGYPKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEA 573
>sp|Q498M5|SH3R2_RAT Putative E3 ubiquitin-protein ligase SH3RF2 OS=Rattus norvegicus
GN=Sh3rf2 PE=2 SV=1
Length = 735
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 400 NIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKVISRVET 459
N+ +A+ ++ Q ++++L+ G+ ++ G + DG+ RG +L T R G++PS VI +
Sbjct: 386 NMFVALHTYSAQGPEELDLKKGEGIRVLGKNQDGWLRGVSLVTGRTGIFPSDYVIPVFSS 445
Query: 460 Y--KFPTYPEVKLP 471
K ++P+ + P
Sbjct: 446 TARKTSSFPDSRHP 459
>sp|Q8C120|SH3R3_MOUSE SH3 domain-containing RING finger protein 3 OS=Mus musculus
GN=Sh3rf3 PE=2 SV=2
Length = 878
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 11/123 (8%)
Query: 346 ITDLYFLSHSDYLVCTFSSQICRIAYELLNTDHRDASLNFKSLDDIWFFAGQRD------ 399
I+ +S SD ++ ++ + D A +L AG++
Sbjct: 398 ISAPVLISSSDPRAAARIGELAHLSCTVPTQDSSSAGPVPTALPRAAAVAGEQGMSPKVQ 457
Query: 400 ---NIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKV--I 454
N+ LA+ + PQ D++ELR G+ + DG+ +G +L+T G++P V +
Sbjct: 458 LPLNVYLALYAYKPQKNDELELRKGEMYRVLEKCQDGWFKGASLKTGVSGVFPGNYVTPV 517
Query: 455 SRV 457
SRV
Sbjct: 518 SRV 520
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 405 VLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
V+ + PQ+ +IEL+ GD V H DG+ +GT R R GL+P
Sbjct: 827 VVSYPPQSEAEIELKEGDIVFVHKKHEDGWFKGTLQRNGRTGLFP 871
>sp|Q9ERE9|JIP2_MOUSE C-Jun-amino-terminal kinase-interacting protein 2 OS=Mus musculus
GN=Mapk8ip2 PE=1 SV=1
Length = 830
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 397 QRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSF 451
+R+ AV P+ D++EL V D V D + RG N+RT G++P+F
Sbjct: 610 EREQTHRAVFRFIPRHPDELELDVDDPVLVEAEEDDFWFRGFNMRTGERGVFPAF 664
>sp|A5D8S5|SH3R1_DANRE E3 ubiquitin-protein ligase SH3RF1 OS=Danio rerio GN=sh3rf1 PE=2
SV=2
Length = 867
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 397 QRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKVISR 456
QR + +A+ ++P+ D++ELR G+ DG+ +GT++ T + G++P +
Sbjct: 436 QRPTVYVAMFPYSPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPGNYMSPV 495
Query: 457 VETYKFPTYPEVKL 470
T + P+V L
Sbjct: 496 SRTVSGSSQPKVPL 509
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 405 VLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
V+ + PQ+ ++EL+ GD V DG+ +GT R R GL+P
Sbjct: 816 VVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGRTGLFP 860
>sp|Q13387|JIP2_HUMAN C-Jun-amino-terminal kinase-interacting protein 2 OS=Homo sapiens
GN=MAPK8IP2 PE=1 SV=2
Length = 824
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 397 QRDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSF 451
+R+ AV P+ D++EL V D V D + RG N+RT G++P+F
Sbjct: 604 EREQTHRAVFRFIPRHPDELELDVDDPVLVEAEEDDFWFRGFNMRTGERGVFPAF 658
>sp|Q8TEJ3|SH3R3_HUMAN SH3 domain-containing RING finger protein 3 OS=Homo sapiens
GN=SH3RF3 PE=1 SV=2
Length = 882
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 400 NIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKV--ISRV 457
N+ LA+ + PQ +D++EL G+ + DG+ +G +LRT G++P V +SRV
Sbjct: 467 NVYLALYAYKPQKSDELELHKGEMYRVLEKCQDGWFKGASLRTGVSGVFPGNYVTPVSRV 526
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 405 VLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
V+ + PQ+ +IEL+ GD V DG+ +GT R R GL+P
Sbjct: 831 VVSYPPQSEAEIELKEGDIVFVHKKREDGWYKGTLQRNGRTGLFP 875
>sp|P38041|BOB1_YEAST Protein BOB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BOI1 PE=1 SV=1
Length = 980
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 403 LAVLDHTPQTADQIELRVGDEVK---PAGNHWDGFSRGTNLRTNRHGLYPS 450
+AV ++ + D++ ++ GD++K G + DG+ G NLRT GLYP+
Sbjct: 19 IAVNQYSKRMEDELNMKPGDKIKVITDDGEYNDGWYYGRNLRTKEEGLYPA 69
>sp|Q9W0K0|JIP1_DROME JNK-interacting protein 1 OS=Drosophila melanogaster GN=Aplip1 PE=1
SV=2
Length = 490
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 410 PQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPS 450
P+ D+IEL +GD + D + G NLRT R G++PS
Sbjct: 284 PRHHDEIELEIGDAIYVQKEAEDLWCEGVNLRTGRQGIFPS 324
>sp|Q3SIG0|CHEB_THIDA Chemotaxis response regulator protein-glutamate methylesterase
OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=cheB PE=3 SV=1
Length = 356
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 6/162 (3%)
Query: 298 KVYVATDE---KGVIMEIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDLYFLSH 354
KV + D +GV+ EI P ++G A AA + + +L + ++ +
Sbjct: 4 KVLIVDDSALIRGVMREIINSQPDMEVVGVAPDPIAARELIKQTNPDVLTLDVEMPKMDG 63
Query: 355 SDYLVCTFSSQICRIAYELLNTDHRDASLNFKSLD--DIWFFAGQRDNIQLAVLDHTPQT 412
++L + + + + R + + ++L+ + F + +IQ +L++T
Sbjct: 64 LEFLEKLMRLRPMPVVM-VSSLTERGSEITMRALELGAVDFVTKPKMSIQSGMLEYTDLI 122
Query: 413 ADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKVI 454
AD+I + +KP H G GT L R+ L S K+I
Sbjct: 123 ADKIRIAARARIKPRTPHAQGGQSGTTLAAVRNPLTSSEKLI 164
>sp|Q8TEC5|SH3R2_HUMAN Putative E3 ubiquitin-protein ligase SH3RF2 OS=Homo sapiens
GN=SH3RF2 PE=1 SV=3
Length = 729
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 400 NIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKVISRV-E 458
N+ +A+ ++ D+++L+ G+ V+ G DG+ RG +L T R G++P+ VI +
Sbjct: 383 NMFVALHSYSAHGPDELDLQKGEGVRVLGKCQDGWLRGVSLVTGRVGIFPNNYVIPIFRK 442
Query: 459 TYKFP 463
T FP
Sbjct: 443 TSSFP 447
>sp|Q8BZT2|SH3R2_MOUSE Putative E3 ubiquitin-protein ligase SH3RF2 OS=Mus musculus
GN=Sh3rf2 PE=1 SV=2
Length = 735
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 399 DNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKVISRVE 458
+N+ +A+ ++ ++++L+ G+ ++ G + DG+ +G +L T R G++PS VI
Sbjct: 384 NNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVFS 443
Query: 459 TY--KFPTYPEVKLP 471
+ K ++P+ + P
Sbjct: 444 STARKTSSFPDSRSP 458
>sp|P39969|BOI2_YEAST Protein BOI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BOI2 PE=1 SV=1
Length = 1040
Score = 35.8 bits (81), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 403 LAVLDHTPQTADQIELRVGDEVKPAGN---HWDGFSRGTNLRTNRHGLYPSFKVISRVET 459
+A+ ++ + D+++++ GD++K + + DG+ G NLRTN GLYP ++
Sbjct: 49 IAINEYFKRMEDELDMKPGDKIKVITDDEEYKDGWYFGRNLRTNEEGLYPVV-FTQKITV 107
Query: 460 YKFPTYPEVKLPQR 473
K PT K +R
Sbjct: 108 EKAPTLMRAKSTKR 121
>sp|Q7Z6J0|SH3R1_HUMAN E3 ubiquitin-protein ligase SH3RF1 OS=Homo sapiens GN=SH3RF1 PE=1
SV=2
Length = 888
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 387 SLDDIWFFAGQ-RDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRH 445
S D I Q R ++ +A+ +TP+ D++ELR G+ DG+ +GT++ T++
Sbjct: 434 STDQIAHLRPQTRPSVYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKI 493
Query: 446 GLYP 449
G++P
Sbjct: 494 GVFP 497
>sp|Q5RBR0|SH3R1_PONAB E3 ubiquitin-protein ligase SH3RF1 OS=Pongo abelii GN=SH3RF1 PE=2
SV=1
Length = 888
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 387 SLDDIWFFAGQ-RDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRH 445
S D I Q R ++ +A+ +TP+ D++ELR G+ DG+ +GT++ T++
Sbjct: 434 STDQIAHLRPQTRPSVYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKI 493
Query: 446 GLYP 449
G++P
Sbjct: 494 GVFP 497
>sp|Q71F54|SH3R1_RAT E3 ubiquitin-protein ligase SH3RF1 OS=Rattus norvegicus GN=Sh3rf1
PE=1 SV=1
Length = 894
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 398 RDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
R ++ +A+ +TP+ D++ELR G+ DG+ +GT++ T++ G++P
Sbjct: 454 RPSVYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWYKGTSMHTSKIGVFP 505
>sp|Q69ZI1|SH3R1_MOUSE E3 ubiquitin-protein ligase SH3RF1 OS=Mus musculus GN=Sh3rf1 PE=1
SV=2
Length = 892
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 398 RDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
R ++ +A+ +TP+ D++ELR G+ DG+ +GT++ T++ G++P
Sbjct: 453 RPSVYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWYKGTSMHTSKIGVFP 504
>sp|A5D7F8|SH3R1_BOVIN E3 ubiquitin-protein ligase SH3RF1 OS=Bos taurus GN=SH3RF1 PE=2
SV=1
Length = 840
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 398 RDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
R ++ +A+ +TP+ D++ELR G+ DG+ +GT++ T++ G++P
Sbjct: 440 RPSVYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFP 491
>sp|Q0K6I0|TRPC_CUPNH Indole-3-glycerol phosphate synthase OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=trpC PE=3
SV=1
Length = 267
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 301 VATDEKGVIMEIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDL-YFLSHSDYL 358
+A + GVI E+++ P+ +L + EA + A L ++TD+ +F H+DYL
Sbjct: 54 IAAGQAGVIAEVKKASPSKGVLREHFVPEAIAESYASHGAACLSVLTDVNFFQGHADYL 112
>sp|A9KTE7|ADDB_CLOPH ATP-dependent helicase/deoxyribonuclease subunit B OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=addB PE=3 SV=2
Length = 1147
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 60 KRSLMTDMEELGTLAGGDTLAERQNRRLGELVQARLRHIQNPRDCKTARKVS-CQINWAC 118
KRS + EEL TL D + + +R ++++ ++RH NP K + C C
Sbjct: 1046 KRSSVAKEEELITLT--DYIKDLMHRFSEQIMEGKVRH--NPYRAKNRNACTYCSFQSVC 1101
Query: 119 GFGCQLHHVTY 129
GF C++ +Y
Sbjct: 1102 GFDCKVSGFSY 1112
>sp|Q46WU7|TRPC_CUPPJ Indole-3-glycerol phosphate synthase OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=trpC PE=3 SV=1
Length = 267
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 301 VATDEKGVIMEIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDL-YFLSHSDYL 358
+A GVI E+++ P+ +L + EA + A L ++TD+ +F H+DYL
Sbjct: 54 IAAGHAGVIAEVKKASPSKGVLRENFVPEAIAESYASHGAACLSVLTDVNFFQGHADYL 112
>sp|Q62417|SRBS1_MOUSE Sorbin and SH3 domain-containing protein 1 OS=Mus musculus GN=Sorbs1
PE=1 SV=2
Length = 1290
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 404 AVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
A+ + PQ D++ELR GD V DG+ GT+ RT + G +P
Sbjct: 1236 ALYSYVPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFP 1281
>sp|Q6NRD3|SH3R1_XENLA E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis GN=sh3rf1 PE=2
SV=1
Length = 826
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 398 RDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKV--IS 455
R ++ +A+ + P+ D++ELR G+ DG+ +GT++ T++ G++P V ++
Sbjct: 399 RPSVFIAIYPYIPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVT 458
Query: 456 RVETYKFP 463
R T P
Sbjct: 459 RALTTATP 466
>sp|Q28E95|SH3R1_XENTR E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus tropicalis GN=sh3rf1
PE=2 SV=1
Length = 861
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 398 RDNIQLAVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYPSFKV--IS 455
R ++ +A+ + P+ D++ELR G+ DG+ +GT++ T++ G++P V ++
Sbjct: 436 RPSVFVAIYPYIPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVT 495
Query: 456 RVETYKFP 463
R T P
Sbjct: 496 RALTTATP 503
>sp|Q9BX66|SRBS1_HUMAN Sorbin and SH3 domain-containing protein 1 OS=Homo sapiens GN=SORBS1
PE=1 SV=3
Length = 1292
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 404 AVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
A+ + PQ D++ELR GD V DG+ GT+ RT + G +P
Sbjct: 1238 ALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFP 1283
>sp|A5VYG8|MURI_PSEP1 Glutamate racemase OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=murI PE=3 SV=1
Length = 265
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 267 SEAAPHPIHEYMRHVEEYYAQLSLQVNVTERKVYVATDEKGVIMEIRQKYPAYTILGDAS 326
E +P I E RH+ E++ + + V + T + ++R+ YP + ++G
Sbjct: 45 GEKSPDYIRERCRHIAEFFHEQGAKAMV----LACNTATVAAVADLRELYPTWPLVGMEP 100
Query: 327 TVEAASSDRRYSTAGLL 343
V+ A++ R G+L
Sbjct: 101 AVKPAAAATRSGVVGVL 117
>sp|P04713|SSG1_MAIZE Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea
mays GN=WAXY PE=3 SV=1
Length = 605
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 20/176 (11%)
Query: 309 IMEIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGII---TDLYFLSHSDYLVCTFSSQ 365
+M + +Y Y D S V Y T D F+ H +L +
Sbjct: 113 VMVVSPRYDQYKDAWDTSVVSEIKMGDGYETVRFFHCYKRGVDRVFVDHPLFLERVWGKT 172
Query: 366 ICRIAYELLNTDHRDASLNFKSLDDIWFFAGQRDNIQLAVLDHTPQTADQIELRVGDEVK 425
+I + TD+RD L F L A + + L++ P + G++V
Sbjct: 173 EEKIYGPVAGTDYRDNQLRFSLLCQAALEAPR-----ILSLNNNPYFSGPY----GEDVV 223
Query: 426 PAGNHWDGFSRGTNLRTN--RHGLYPSFKV------ISRVETYKFPTYPEVKLPQR 473
N W L++N HG+Y K IS + F YPE+ LP+R
Sbjct: 224 FVCNDWHTGPLSCYLKSNYQSHGIYRDAKTAFCIHNISYQGRFAFSDYPELNLPER 279
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 283 EYYAQLSLQVNVTERKVYVATD--EKGVIMEIRQKYPAYTILGDASTVEAASSDRRYS 338
E Y Q+ Q+ VT +Y+ TD EKG++ I Q+ ++G A++DR YS
Sbjct: 97 EKYLQICRQMQVTAEIIYIETDSVEKGILQLISQRGVTKLVMG-------AAADRHYS 147
>sp|P27111|CYNR_ECOLI HTH-type transcriptional regulator CynR OS=Escherichia coli (strain
K12) GN=cynR PE=1 SV=5
Length = 299
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 166 CRTATEGSVIYWPDHKPDKQIIKLASQTYSLSGPGFIPRAVPQDIAQELIHGEPIVWWVG 225
CR + + + P H P+ + I L +++ +L P AV + +A +H E +V
Sbjct: 137 CRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSA 196
Query: 226 QIVKYIFKPNAKVRAMLSHHAQQIGFSHPVVGV 258
+ R + H+ ++ G HP V +
Sbjct: 197 EFA---------TREQIDHYCEKAGL-HPQVVI 219
>sp|Q5NQ36|TRPC_ZYMMO Indole-3-glycerol phosphate synthase OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=trpC PE=3
SV=1
Length = 264
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 307 GVIMEIRQKYPAYTILGDASTVEAASSDRRYSTAGLLGIITDL-YFLSHSDYLVCT 361
G+I EI++ P+ ++ T A + D A L ++TD YF H DYL+
Sbjct: 55 GLIAEIKKASPSKGLIRSDFTPAAHARDYEEGGAACLSVLTDRPYFQGHEDYLIAA 110
>sp|O60504|VINEX_HUMAN Vinexin OS=Homo sapiens GN=SORBS3 PE=1 SV=2
Length = 671
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 404 AVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
A+ + PQ D++ELR GD V DG+ G + RT + G +P
Sbjct: 619 AMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFP 664
>sp|Q9R1Z8|VINEX_MOUSE Vinexin OS=Mus musculus GN=Sorbs3 PE=1 SV=1
Length = 733
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 404 AVLDHTPQTADQIELRVGDEVKPAGNHWDGFSRGTNLRTNRHGLYP 449
A+ + PQ D++ELR GD V DG+ G + RT + G +P
Sbjct: 681 AMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFP 726
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,566,978
Number of Sequences: 539616
Number of extensions: 7365112
Number of successful extensions: 17364
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 17266
Number of HSP's gapped (non-prelim): 59
length of query: 473
length of database: 191,569,459
effective HSP length: 121
effective length of query: 352
effective length of database: 126,275,923
effective search space: 44449124896
effective search space used: 44449124896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)