Query psy19
Match_columns 494
No_of_seqs 366 out of 3219
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 19:06:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy19.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/19hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ldg_A Putative uncharacterize 100.0 3.7E-62 1.2E-66 509.6 26.8 325 15-469 3-376 (384)
2 3k0b_A Predicted N6-adenine-sp 100.0 1.2E-60 3.9E-65 499.9 26.6 324 16-469 14-383 (393)
3 3ldu_A Putative methylase; str 100.0 4.6E-59 1.6E-63 486.7 25.3 322 16-468 6-376 (385)
4 3v97_A Ribosomal RNA large sub 100.0 8.4E-58 2.9E-62 509.7 31.3 328 17-471 3-382 (703)
5 3tm4_A TRNA (guanine N2-)-meth 100.0 2E-56 7E-61 464.6 28.7 345 17-476 1-373 (373)
6 3tma_A Methyltransferase; thum 100.0 8.6E-55 2.9E-59 448.3 31.3 332 17-470 20-354 (354)
7 3evz_A Methyltransferase; NYSG 99.7 6.1E-17 2.1E-21 154.7 18.5 160 307-477 51-227 (230)
8 3lpm_A Putative methyltransfer 99.7 6.4E-16 2.2E-20 151.4 20.6 147 301-455 38-201 (259)
9 4dzr_A Protein-(glutamine-N5) 99.7 6.5E-17 2.2E-21 151.4 11.3 160 290-459 8-196 (215)
10 2ozv_A Hypothetical protein AT 99.7 3.9E-16 1.3E-20 153.6 16.7 149 302-456 27-195 (260)
11 2b3t_A Protein methyltransfera 99.7 2.3E-15 7.7E-20 148.8 19.5 161 291-462 90-269 (276)
12 3eey_A Putative rRNA methylase 99.7 3.5E-15 1.2E-19 139.1 17.7 165 307-476 18-194 (197)
13 3khk_A Type I restriction-modi 99.6 6.2E-16 2.1E-20 167.7 13.1 168 295-472 229-448 (544)
14 1o9g_A RRNA methyltransferase; 99.6 6.3E-16 2.2E-20 150.3 11.7 130 298-432 38-216 (250)
15 2okc_A Type I restriction enzy 99.6 4.9E-16 1.7E-20 164.5 11.3 172 295-472 155-359 (445)
16 2f8l_A Hypothetical protein LM 99.6 1.2E-15 4E-20 156.0 13.5 175 289-472 108-307 (344)
17 2b78_A Hypothetical protein SM 99.6 2.9E-15 1E-19 155.8 16.7 150 310-480 211-370 (385)
18 2ar0_A M.ecoki, type I restric 99.6 3.5E-15 1.2E-19 161.8 16.2 173 296-472 154-364 (541)
19 3s1s_A Restriction endonucleas 99.6 1.3E-15 4.6E-20 168.9 12.9 144 290-435 294-470 (878)
20 3p9n_A Possible methyltransfer 99.6 2.9E-15 9.9E-20 139.2 13.2 128 292-433 22-156 (189)
21 3lkd_A Type I restriction-modi 99.6 2.1E-15 7.2E-20 163.4 13.6 173 288-471 198-409 (542)
22 2frn_A Hypothetical protein PH 99.6 9.4E-15 3.2E-19 145.2 17.2 105 309-432 123-227 (278)
23 4dmg_A Putative uncharacterize 99.6 9.7E-15 3.3E-19 152.4 18.0 149 310-480 213-367 (393)
24 4dcm_A Ribosomal RNA large sub 99.6 6.7E-15 2.3E-19 152.7 16.5 126 301-433 212-337 (375)
25 1nv8_A HEMK protein; class I a 99.6 7.2E-15 2.5E-19 146.7 14.0 135 291-433 103-252 (284)
26 2esr_A Methyltransferase; stru 99.6 8.4E-15 2.9E-19 134.2 12.6 126 294-434 13-142 (177)
27 2fhp_A Methylase, putative; al 99.6 9.1E-15 3.1E-19 134.4 12.8 129 291-434 23-158 (187)
28 2ih2_A Modification methylase 99.6 8.7E-15 3E-19 152.4 13.3 159 295-471 23-212 (421)
29 2ift_A Putative methylase HI07 99.6 7.2E-15 2.5E-19 138.7 10.9 125 296-434 37-167 (201)
30 1dus_A MJ0882; hypothetical pr 99.6 1E-13 3.5E-18 127.2 17.6 122 298-434 39-161 (194)
31 3e05_A Precorrin-6Y C5,15-meth 99.6 7.5E-14 2.5E-18 131.1 16.8 133 295-444 24-159 (204)
32 3mti_A RRNA methylase; SAM-dep 99.6 1.3E-13 4.4E-18 127.1 18.1 116 308-431 19-136 (185)
33 2fpo_A Methylase YHHF; structu 99.6 1.5E-14 5.2E-19 136.6 11.8 125 294-434 36-164 (202)
34 2igt_A SAM dependent methyltra 99.6 1.3E-13 4.4E-18 140.8 19.3 115 309-430 151-272 (332)
35 1yzh_A TRNA (guanine-N(7)-)-me 99.5 4.2E-14 1.4E-18 134.1 14.1 121 310-436 40-162 (214)
36 1wxx_A TT1595, hypothetical pr 99.5 4.1E-14 1.4E-18 146.8 14.6 152 307-480 206-366 (382)
37 2as0_A Hypothetical protein PH 99.5 5.1E-14 1.7E-18 146.6 14.8 152 310-480 216-377 (396)
38 3mb5_A SAM-dependent methyltra 99.5 1.5E-13 5.3E-18 133.2 17.0 134 292-444 74-211 (255)
39 3dmg_A Probable ribosomal RNA 99.5 1.5E-13 5.3E-18 142.8 17.7 127 295-433 215-343 (381)
40 3k6r_A Putative transferase PH 99.5 2.7E-13 9.3E-18 135.1 17.5 101 309-428 123-223 (278)
41 3hm2_A Precorrin-6Y C5,15-meth 99.5 2E-13 6.7E-18 124.4 15.0 121 295-433 9-130 (178)
42 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.7E-18 131.9 13.4 119 310-436 37-159 (213)
43 2h00_A Methyltransferase 10 do 99.5 4.1E-13 1.4E-17 130.4 17.7 144 311-461 65-244 (254)
44 3ufb_A Type I restriction-modi 99.5 4.2E-14 1.4E-18 152.9 11.8 168 295-471 201-414 (530)
45 3dxy_A TRNA (guanine-N(7)-)-me 99.5 8E-14 2.7E-18 133.7 12.4 122 311-440 34-160 (218)
46 3dh0_A SAM dependent methyltra 99.5 7.9E-13 2.7E-17 124.8 18.3 159 300-477 26-200 (219)
47 1xdz_A Methyltransferase GIDB; 99.5 8.7E-13 3E-17 127.4 18.9 143 310-472 69-221 (240)
48 3njr_A Precorrin-6Y methylase; 99.5 5E-13 1.7E-17 126.5 16.8 123 295-437 39-161 (204)
49 2pwy_A TRNA (adenine-N(1)-)-me 99.5 6.9E-13 2.4E-17 128.3 17.7 128 292-438 77-206 (258)
50 3c0k_A UPF0064 protein YCCW; P 99.5 2.3E-13 7.7E-18 141.8 15.2 118 310-432 219-341 (396)
51 3a27_A TYW2, uncharacterized p 99.5 2.7E-13 9.2E-18 134.3 14.9 107 306-431 114-220 (272)
52 3q87_B N6 adenine specific DNA 99.5 1.2E-12 4.1E-17 120.1 17.8 143 290-460 4-154 (170)
53 1ws6_A Methyltransferase; stru 99.5 6.4E-14 2.2E-18 126.6 9.0 125 293-434 21-151 (171)
54 2pxx_A Uncharacterized protein 99.5 6E-13 2E-17 124.5 16.0 152 310-472 41-200 (215)
55 3dlc_A Putative S-adenosyl-L-m 99.5 3.1E-13 1E-17 126.6 14.0 123 293-430 26-148 (219)
56 1nkv_A Hypothetical protein YJ 99.5 4.3E-13 1.5E-17 129.6 15.0 125 292-431 17-141 (256)
57 1o54_A SAM-dependent O-methylt 99.5 4.8E-13 1.6E-17 132.0 15.6 123 293-434 94-217 (277)
58 3kkz_A Uncharacterized protein 99.5 4.5E-13 1.5E-17 130.9 15.0 124 293-431 27-151 (267)
59 3ajd_A Putative methyltransfer 99.5 7E-14 2.4E-18 138.4 9.2 123 304-432 76-213 (274)
60 2yxd_A Probable cobalt-precorr 99.5 6.8E-13 2.3E-17 120.8 15.1 129 293-444 17-148 (183)
61 1ixk_A Methyltransferase; open 99.5 2.5E-13 8.7E-18 137.4 12.9 125 302-432 109-248 (315)
62 1i9g_A Hypothetical protein RV 99.5 1.3E-12 4.4E-17 128.4 17.6 131 292-439 80-212 (280)
63 1l3i_A Precorrin-6Y methyltran 99.5 7.9E-13 2.7E-17 121.1 14.8 133 293-444 15-151 (192)
64 1yb2_A Hypothetical protein TA 99.5 6.5E-13 2.2E-17 131.1 14.8 126 293-438 92-219 (275)
65 3uwp_A Histone-lysine N-methyl 99.5 3.1E-13 1.1E-17 140.8 13.0 125 292-429 154-287 (438)
66 2qm3_A Predicted methyltransfe 99.5 1.2E-12 4.2E-17 135.2 17.3 121 295-431 154-279 (373)
67 3f4k_A Putative methyltransfer 99.5 8.4E-13 2.9E-17 127.6 15.0 123 294-431 28-151 (257)
68 3bt7_A TRNA (uracil-5-)-methyl 99.4 4.7E-13 1.6E-17 138.2 13.8 124 295-441 198-337 (369)
69 3g89_A Ribosomal RNA small sub 99.4 1.9E-12 6.3E-17 126.7 17.2 142 310-471 79-230 (249)
70 4gek_A TRNA (CMO5U34)-methyltr 99.4 8.9E-13 3E-17 130.0 14.9 108 309-429 68-177 (261)
71 2pjd_A Ribosomal RNA small sub 99.4 6.5E-13 2.2E-17 135.7 14.4 123 299-433 184-306 (343)
72 1wy7_A Hypothetical protein PH 99.4 2.9E-12 9.9E-17 120.1 17.0 117 294-429 29-148 (207)
73 3jwh_A HEN1; methyltransferase 99.4 4.6E-13 1.6E-17 126.7 11.5 133 292-432 10-142 (217)
74 3lec_A NADB-rossmann superfami 99.4 4.5E-12 1.6E-16 122.8 18.5 145 309-470 19-164 (230)
75 3ntv_A MW1564 protein; rossman 99.4 7.2E-13 2.5E-17 127.6 12.7 118 295-428 55-174 (232)
76 3m6w_A RRNA methylase; rRNA me 99.4 3.7E-13 1.3E-17 143.0 11.4 121 304-431 94-230 (464)
77 3v97_A Ribosomal RNA large sub 99.4 1.5E-12 5.1E-17 145.3 16.5 117 311-432 539-659 (703)
78 3kr9_A SAM-dependent methyltra 99.4 5.6E-12 1.9E-16 121.8 18.4 143 309-469 13-157 (225)
79 2yxl_A PH0851 protein, 450AA l 99.4 1.6E-12 5.6E-17 137.7 15.1 127 300-432 248-391 (450)
80 3sm3_A SAM-dependent methyltra 99.4 6.4E-12 2.2E-16 119.1 17.6 114 310-431 29-142 (235)
81 2yx1_A Hypothetical protein MJ 99.4 2.7E-12 9.1E-17 131.0 15.9 111 310-443 194-306 (336)
82 1fbn_A MJ fibrillarin homologu 99.4 3.7E-12 1.3E-16 122.2 16.0 117 294-429 54-177 (230)
83 3gnl_A Uncharacterized protein 99.4 7.8E-12 2.7E-16 122.2 18.3 145 309-470 19-164 (244)
84 3jwg_A HEN1, methyltransferase 99.4 8.4E-13 2.9E-17 124.9 10.7 131 293-431 11-141 (219)
85 2yvl_A TRMI protein, hypotheti 99.4 4.6E-12 1.6E-16 121.8 16.1 129 293-441 73-201 (248)
86 1sqg_A SUN protein, FMU protei 99.4 1.2E-12 4E-17 137.9 12.9 128 297-431 232-375 (429)
87 3vc1_A Geranyl diphosphate 2-C 99.4 1.7E-12 5.7E-17 130.3 13.5 123 294-431 99-222 (312)
88 1ne2_A Hypothetical protein TA 99.4 7.1E-12 2.4E-16 117.1 16.9 103 297-419 34-139 (200)
89 1jsx_A Glucose-inhibited divis 99.4 3.6E-12 1.2E-16 119.3 14.8 137 311-470 65-205 (207)
90 2ipx_A RRNA 2'-O-methyltransfe 99.4 3E-12 1E-16 122.8 14.5 120 294-431 57-183 (233)
91 3gdh_A Trimethylguanosine synt 99.4 2.4E-13 8.1E-18 130.8 6.8 100 310-425 77-176 (241)
92 3bus_A REBM, methyltransferase 99.4 4.3E-12 1.5E-16 123.9 15.8 121 296-430 46-166 (273)
93 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.4E-12 4.6E-17 126.6 11.9 124 310-437 45-175 (235)
94 1vl5_A Unknown conserved prote 99.4 1.9E-12 6.5E-17 125.8 13.0 114 301-430 27-140 (260)
95 2b25_A Hypothetical protein; s 99.4 3.8E-12 1.3E-16 129.2 15.7 135 293-441 87-230 (336)
96 3grz_A L11 mtase, ribosomal pr 99.4 9.4E-12 3.2E-16 116.6 17.1 116 309-444 58-176 (205)
97 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1.7E-12 5.9E-17 125.9 11.9 121 310-434 48-177 (246)
98 3m4x_A NOL1/NOP2/SUN family pr 99.4 7.3E-13 2.5E-17 140.5 10.0 140 280-431 79-235 (456)
99 2xvm_A Tellurite resistance pr 99.4 4.9E-12 1.7E-16 117.0 14.4 113 303-430 24-136 (199)
100 3mgg_A Methyltransferase; NYSG 99.4 3.9E-12 1.3E-16 124.6 14.2 120 298-431 24-143 (276)
101 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.1E-11 3.6E-16 130.8 18.5 127 293-440 268-398 (433)
102 2frx_A Hypothetical protein YE 99.4 2.5E-12 8.6E-17 137.4 13.8 121 305-431 109-247 (479)
103 4df3_A Fibrillarin-like rRNA/T 99.4 2.8E-12 9.6E-17 124.6 12.5 136 274-429 36-181 (233)
104 1ve3_A Hypothetical protein PH 99.4 4.3E-12 1.5E-16 120.0 13.6 109 310-433 37-145 (227)
105 3ocj_A Putative exported prote 99.4 4.5E-12 1.5E-16 126.8 14.4 113 307-430 114-227 (305)
106 3fpf_A Mtnas, putative unchara 99.4 7.3E-12 2.5E-16 125.6 15.7 117 297-432 108-224 (298)
107 3dr5_A Putative O-methyltransf 99.4 4.1E-12 1.4E-16 122.1 13.2 114 299-428 44-161 (221)
108 2gpy_A O-methyltransferase; st 99.4 1.5E-12 5.1E-17 124.8 10.0 119 295-429 38-159 (233)
109 3lbf_A Protein-L-isoaspartate 99.4 7.1E-12 2.4E-16 117.7 14.1 116 295-432 61-176 (210)
110 2nxc_A L11 mtase, ribosomal pr 99.4 9.8E-12 3.4E-16 121.6 15.6 115 309-444 118-235 (254)
111 2o57_A Putative sarcosine dime 99.4 7.1E-12 2.4E-16 124.2 14.7 121 297-431 64-188 (297)
112 1zx0_A Guanidinoacetate N-meth 99.4 2.8E-12 9.5E-17 123.3 11.3 111 309-430 58-170 (236)
113 1pjz_A Thiopurine S-methyltran 99.4 3.7E-12 1.3E-16 120.2 11.8 127 295-431 7-141 (203)
114 3hem_A Cyclopropane-fatty-acyl 99.3 1.1E-11 3.7E-16 123.5 15.8 121 301-431 62-184 (302)
115 2gb4_A Thiopurine S-methyltran 99.3 6.4E-12 2.2E-16 123.2 13.7 127 295-430 52-191 (252)
116 3e23_A Uncharacterized protein 99.3 3.4E-11 1.2E-15 113.1 18.2 146 308-476 40-207 (211)
117 3tr6_A O-methyltransferase; ce 99.3 1.8E-12 6E-17 123.2 9.1 120 294-429 47-173 (225)
118 2ex4_A Adrenal gland protein A 99.3 1.1E-11 3.8E-16 119.2 14.8 122 310-444 78-216 (241)
119 2fyt_A Protein arginine N-meth 99.3 5.6E-12 1.9E-16 128.8 13.4 117 298-427 51-168 (340)
120 3duw_A OMT, O-methyltransferas 99.3 3.2E-12 1.1E-16 121.4 10.6 119 295-429 42-166 (223)
121 3h2b_A SAM-dependent methyltra 99.3 4.6E-11 1.6E-15 111.4 18.3 121 312-453 42-180 (203)
122 3thr_A Glycine N-methyltransfe 99.3 5.6E-12 1.9E-16 124.5 12.6 136 297-437 43-182 (293)
123 3tfw_A Putative O-methyltransf 99.3 4.6E-12 1.6E-16 123.4 11.7 119 295-429 47-169 (248)
124 3dtn_A Putative methyltransfer 99.3 6.2E-12 2.1E-16 120.0 12.4 120 297-431 29-149 (234)
125 1xxl_A YCGJ protein; structura 99.3 1.8E-11 6E-16 117.9 15.3 114 302-431 12-125 (239)
126 3ofk_A Nodulation protein S; N 99.3 9.7E-12 3.3E-16 117.1 13.2 120 298-433 38-157 (216)
127 3m70_A Tellurite resistance pr 99.3 8.4E-12 2.9E-16 123.1 13.1 105 311-431 120-224 (286)
128 3ujc_A Phosphoethanolamine N-m 99.3 6.3E-12 2.1E-16 121.6 11.9 122 294-430 38-159 (266)
129 3u81_A Catechol O-methyltransf 99.3 9.3E-12 3.2E-16 118.5 12.7 138 293-444 40-187 (221)
130 3g5t_A Trans-aconitate 3-methy 99.3 1.5E-11 5.2E-16 122.3 14.7 119 296-428 22-147 (299)
131 2b9e_A NOL1/NOP2/SUN domain fa 99.3 2.2E-11 7.6E-16 123.1 15.6 121 305-432 96-236 (309)
132 3axs_A Probable N(2),N(2)-dime 99.3 1.7E-11 5.9E-16 127.7 14.8 107 310-433 51-161 (392)
133 1nt2_A Fibrillarin-like PRE-rR 99.3 1.6E-11 5.5E-16 116.9 13.2 118 294-430 38-161 (210)
134 1y8c_A S-adenosylmethionine-de 99.3 7.4E-11 2.5E-15 112.5 18.0 125 297-436 21-148 (246)
135 1dl5_A Protein-L-isoaspartate 99.3 1.2E-11 4E-16 124.9 13.0 118 295-432 59-177 (317)
136 3l8d_A Methyltransferase; stru 99.3 4.3E-11 1.5E-15 114.4 16.3 102 310-430 52-153 (242)
137 3c3p_A Methyltransferase; NP_9 99.3 9.6E-12 3.3E-16 117.3 11.4 116 296-428 41-158 (210)
138 2jjq_A Uncharacterized RNA met 99.3 3.3E-11 1.1E-15 126.9 16.7 123 294-442 276-398 (425)
139 2p35_A Trans-aconitate 2-methy 99.3 1.3E-11 4.3E-16 119.3 12.5 118 295-432 17-134 (259)
140 1ri5_A MRNA capping enzyme; me 99.3 3E-11 1E-15 118.9 15.2 122 309-440 62-184 (298)
141 1zq9_A Probable dimethyladenos 99.3 1.8E-11 6.2E-16 122.0 13.7 94 295-396 12-105 (285)
142 1g8a_A Fibrillarin-like PRE-rR 99.3 1E-11 3.5E-16 118.4 11.2 119 294-430 53-178 (227)
143 2avd_A Catechol-O-methyltransf 99.3 4.4E-12 1.5E-16 120.8 8.6 118 295-428 53-177 (229)
144 3cgg_A SAM-dependent methyltra 99.3 3.5E-11 1.2E-15 110.3 14.4 118 309-444 44-166 (195)
145 2yxe_A Protein-L-isoaspartate 99.3 2.6E-11 8.8E-16 114.3 13.6 119 295-433 61-180 (215)
146 3p2e_A 16S rRNA methylase; met 99.3 2E-12 6.8E-17 124.5 6.0 110 310-428 23-137 (225)
147 3orh_A Guanidinoacetate N-meth 99.3 9.4E-12 3.2E-16 120.3 10.7 109 310-429 59-169 (236)
148 1xtp_A LMAJ004091AAA; SGPP, st 99.3 5.2E-11 1.8E-15 114.6 15.7 118 299-431 81-198 (254)
149 3r3h_A O-methyltransferase, SA 99.3 1.4E-12 4.7E-17 127.0 4.4 118 295-428 44-168 (242)
150 3lcc_A Putative methyl chlorid 99.3 4.9E-11 1.7E-15 114.0 15.2 119 312-444 67-198 (235)
151 1kpg_A CFA synthase;, cyclopro 99.3 4.3E-11 1.5E-15 117.9 15.1 118 299-431 52-169 (287)
152 1g6q_1 HnRNP arginine N-methyl 99.3 1.8E-11 6.3E-16 124.2 12.8 118 298-427 25-142 (328)
153 3q7e_A Protein arginine N-meth 99.3 1.3E-11 4.3E-16 126.6 11.6 114 302-427 57-170 (349)
154 3gu3_A Methyltransferase; alph 99.3 4.2E-11 1.5E-15 118.4 14.9 120 297-432 7-128 (284)
155 4htf_A S-adenosylmethionine-de 99.3 4.5E-11 1.6E-15 117.7 15.0 108 311-433 68-176 (285)
156 3r0q_C Probable protein argini 99.3 2E-11 6.8E-16 126.4 12.6 118 297-428 49-167 (376)
157 2fk8_A Methoxy mycolic acid sy 99.3 3.5E-11 1.2E-15 120.5 14.0 118 299-431 78-195 (318)
158 1i1n_A Protein-L-isoaspartate 99.3 1.2E-11 4E-16 117.7 9.8 124 295-433 59-185 (226)
159 3bkw_A MLL3908 protein, S-aden 99.3 3.7E-11 1.3E-15 114.7 13.3 114 302-434 34-148 (243)
160 3g5l_A Putative S-adenosylmeth 99.3 3.4E-11 1.2E-15 116.3 13.0 114 303-434 36-149 (253)
161 2h1r_A Dimethyladenosine trans 99.3 3.6E-11 1.2E-15 120.7 13.6 93 295-396 26-118 (299)
162 1iy9_A Spermidine synthase; ro 99.3 1.2E-10 4E-15 115.6 17.1 116 311-432 75-191 (275)
163 2yqz_A Hypothetical protein TT 99.3 5.4E-11 1.8E-15 114.9 14.1 117 297-430 24-141 (263)
164 1vbf_A 231AA long hypothetical 99.3 5E-11 1.7E-15 113.6 13.5 116 294-433 53-168 (231)
165 4fsd_A Arsenic methyltransfera 99.2 7.2E-11 2.5E-15 122.2 15.7 110 309-430 81-203 (383)
166 1wzn_A SAM-dependent methyltra 99.2 6.7E-11 2.3E-15 114.0 14.4 116 303-433 33-148 (252)
167 1jg1_A PIMT;, protein-L-isoasp 99.2 2.9E-11 1E-15 116.2 11.8 119 293-433 73-192 (235)
168 3g2m_A PCZA361.24; SAM-depende 99.2 1.5E-11 5.2E-16 122.3 10.0 126 297-435 69-195 (299)
169 3adn_A Spermidine synthase; am 99.2 1.1E-10 3.9E-15 117.0 16.2 115 311-430 83-198 (294)
170 3bwc_A Spermidine synthase; SA 99.2 1.2E-10 4.2E-15 117.0 16.3 117 309-432 93-212 (304)
171 2kw5_A SLR1183 protein; struct 99.2 6.8E-11 2.3E-15 110.1 13.4 105 310-432 29-133 (202)
172 2pbf_A Protein-L-isoaspartate 99.2 2.9E-11 1E-15 115.0 11.0 122 296-432 63-195 (227)
173 3i9f_A Putative type 11 methyl 99.2 1.1E-10 3.6E-15 105.8 14.2 144 304-478 10-168 (170)
174 1u2z_A Histone-lysine N-methyl 99.2 3.7E-11 1.3E-15 126.6 12.8 121 296-429 227-358 (433)
175 1sui_A Caffeoyl-COA O-methyltr 99.2 2.3E-11 7.9E-16 118.6 10.5 117 296-428 64-188 (247)
176 3e8s_A Putative SAM dependent 99.2 6.8E-11 2.3E-15 111.2 13.2 108 302-432 43-154 (227)
177 2dul_A N(2),N(2)-dimethylguano 99.2 5.1E-11 1.7E-15 123.6 13.3 104 311-432 47-166 (378)
178 4hg2_A Methyltransferase type 99.2 2.2E-11 7.6E-16 119.8 10.0 110 297-431 27-136 (257)
179 2p8j_A S-adenosylmethionine-de 99.2 4.8E-11 1.6E-15 111.5 11.7 110 308-431 20-129 (209)
180 3hnr_A Probable methyltransfer 99.2 3E-11 1E-15 113.9 10.4 104 309-431 43-146 (220)
181 2y1w_A Histone-arginine methyl 99.2 6.5E-11 2.2E-15 121.1 13.5 118 297-428 36-153 (348)
182 3mq2_A 16S rRNA methyltransfer 99.2 2.2E-11 7.6E-16 115.1 9.2 118 307-430 23-140 (218)
183 3ege_A Putative methyltransfer 99.2 3.1E-11 1.1E-15 117.8 10.4 115 295-432 18-132 (261)
184 3g07_A 7SK snRNA methylphospha 99.2 4.2E-11 1.5E-15 119.3 11.4 120 310-432 45-222 (292)
185 3ccf_A Cyclopropane-fatty-acyl 99.2 3.2E-11 1.1E-15 118.6 10.1 111 300-432 46-156 (279)
186 1yub_A Ermam, rRNA methyltrans 99.2 4.7E-13 1.6E-17 130.2 -3.0 123 295-431 13-146 (245)
187 3c3y_A Pfomt, O-methyltransfer 99.2 4.2E-11 1.5E-15 115.8 10.8 118 296-429 55-180 (237)
188 3cbg_A O-methyltransferase; cy 99.2 4.7E-11 1.6E-15 114.9 10.8 119 295-429 56-181 (232)
189 1inl_A Spermidine synthase; be 99.2 2.4E-10 8.1E-15 114.6 16.3 115 311-432 90-207 (296)
190 3id6_C Fibrillarin-like rRNA/T 99.2 3.6E-10 1.2E-14 109.7 16.8 120 293-430 55-181 (232)
191 3bzb_A Uncharacterized protein 99.2 1.5E-10 5.2E-15 114.8 14.5 125 296-431 64-206 (281)
192 1qzz_A RDMB, aclacinomycin-10- 99.2 3.3E-10 1.1E-14 116.0 17.5 117 301-431 172-288 (374)
193 1ej0_A FTSJ; methyltransferase 99.2 5.1E-11 1.7E-15 107.0 10.0 108 308-432 19-138 (180)
194 3d2l_A SAM-dependent methyltra 99.2 2.3E-10 7.8E-15 109.2 15.1 124 297-438 21-145 (243)
195 1p91_A Ribosomal RNA large sub 99.2 4.3E-11 1.5E-15 116.8 10.3 117 294-437 69-185 (269)
196 1x19_A CRTF-related protein; m 99.2 5.7E-10 2E-14 114.0 19.0 118 299-430 178-295 (359)
197 2pt6_A Spermidine synthase; tr 99.2 9.6E-11 3.3E-15 118.9 13.0 113 311-431 116-231 (321)
198 2hnk_A SAM-dependent O-methylt 99.2 3.6E-11 1.2E-15 115.8 9.0 121 294-430 43-181 (239)
199 3b3j_A Histone-arginine methyl 99.2 5.5E-11 1.9E-15 127.1 11.1 118 296-428 143-261 (480)
200 3tqs_A Ribosomal RNA small sub 99.2 5.8E-11 2E-15 116.8 10.3 92 295-396 13-108 (255)
201 3gru_A Dimethyladenosine trans 99.2 5E-11 1.7E-15 119.7 10.0 95 293-396 32-126 (295)
202 3ou2_A SAM-dependent methyltra 99.2 2.1E-10 7.1E-15 107.5 13.5 108 306-432 41-148 (218)
203 3bkx_A SAM-dependent methyltra 99.2 1.4E-10 4.7E-15 113.3 11.9 118 300-430 32-159 (275)
204 3bgv_A MRNA CAP guanine-N7 met 99.2 2.5E-10 8.6E-15 114.3 13.9 141 295-441 16-166 (313)
205 2avn_A Ubiquinone/menaquinone 99.2 1.8E-10 6.3E-15 112.1 12.5 113 299-434 44-156 (260)
206 2r6z_A UPF0341 protein in RSP 99.2 9.4E-11 3.2E-15 115.5 10.3 85 308-398 80-175 (258)
207 2o07_A Spermidine synthase; st 99.1 9.7E-11 3.3E-15 118.0 10.5 115 308-430 92-209 (304)
208 2r3s_A Uncharacterized protein 99.1 3.7E-10 1.3E-14 113.6 14.8 122 297-431 149-272 (335)
209 3m33_A Uncharacterized protein 99.1 1.7E-10 5.7E-15 110.2 11.5 125 292-444 30-158 (226)
210 2b2c_A Spermidine synthase; be 99.1 2.7E-10 9.4E-15 115.3 13.6 113 311-431 108-223 (314)
211 3iv6_A Putative Zn-dependent a 99.1 1.5E-10 5E-15 114.4 11.3 113 298-431 32-149 (261)
212 4hc4_A Protein arginine N-meth 99.1 5.5E-11 1.9E-15 123.2 8.6 105 310-427 82-186 (376)
213 1xj5_A Spermidine synthase 1; 99.1 1.4E-10 4.9E-15 118.3 11.3 115 308-430 117-235 (334)
214 3gjy_A Spermidine synthase; AP 99.1 2E-10 7E-15 116.3 12.3 125 297-431 72-201 (317)
215 3dli_A Methyltransferase; PSI- 99.1 1.3E-10 4.4E-15 111.6 10.4 117 295-433 24-143 (240)
216 2p7i_A Hypothetical protein; p 99.1 2.5E-10 8.6E-15 108.7 12.2 105 309-434 40-145 (250)
217 2i7c_A Spermidine synthase; tr 99.1 8.5E-10 2.9E-14 109.8 16.4 115 310-432 77-194 (283)
218 1tw3_A COMT, carminomycin 4-O- 99.1 1.3E-09 4.3E-14 111.2 17.9 116 301-430 173-288 (360)
219 1r18_A Protein-L-isoaspartate( 99.1 2.1E-10 7.1E-15 109.5 11.2 122 295-432 66-196 (227)
220 3fut_A Dimethyladenosine trans 99.1 7.7E-11 2.6E-15 117.0 8.4 91 295-396 31-122 (271)
221 3gwz_A MMCR; methyltransferase 99.1 3.4E-09 1.1E-13 109.0 20.8 119 298-430 189-307 (369)
222 2gs9_A Hypothetical protein TT 99.1 2.9E-10 1E-14 106.5 11.7 99 311-433 36-135 (211)
223 3pfg_A N-methyltransferase; N, 99.1 2.7E-10 9.4E-15 110.7 11.8 101 310-429 49-150 (263)
224 2plw_A Ribosomal RNA methyltra 99.1 5.8E-10 2E-14 103.7 13.0 105 309-431 20-155 (201)
225 1qam_A ERMC' methyltransferase 99.1 2.3E-10 7.9E-15 111.4 10.5 94 293-396 12-106 (244)
226 1mjf_A Spermidine synthase; sp 99.1 3.6E-10 1.2E-14 112.3 12.0 112 310-431 74-194 (281)
227 2i62_A Nicotinamide N-methyltr 99.1 8.3E-10 2.8E-14 106.7 14.2 117 308-430 53-198 (265)
228 1uir_A Polyamine aminopropyltr 99.1 7.1E-10 2.4E-14 112.0 14.0 115 311-430 77-195 (314)
229 3dou_A Ribosomal RNA large sub 99.1 6.1E-10 2.1E-14 104.4 12.2 104 309-431 23-140 (191)
230 1m6y_A S-adenosyl-methyltransf 99.1 1.6E-10 5.4E-15 116.4 7.8 92 297-394 12-108 (301)
231 2a14_A Indolethylamine N-methy 99.1 1.4E-09 4.7E-14 106.5 14.2 117 308-430 52-197 (263)
232 3dp7_A SAM-dependent methyltra 99.1 1.3E-09 4.4E-14 111.9 13.9 108 310-430 178-287 (363)
233 3ggd_A SAM-dependent methyltra 99.0 4.9E-10 1.7E-14 107.6 10.0 108 308-432 53-165 (245)
234 2nyu_A Putative ribosomal RNA 99.0 1.2E-09 4.1E-14 101.0 12.1 108 308-432 19-147 (196)
235 3bxo_A N,N-dimethyltransferase 99.0 1.1E-09 3.8E-14 104.1 12.0 103 310-431 39-142 (239)
236 3htx_A HEN1; HEN1, small RNA m 99.0 1.7E-09 5.9E-14 120.5 15.0 132 293-433 703-837 (950)
237 2g72_A Phenylethanolamine N-me 99.0 2.3E-09 7.9E-14 105.9 14.5 129 310-444 70-247 (289)
238 3ll7_A Putative methyltransfer 99.0 3.2E-10 1.1E-14 118.5 8.6 93 295-396 79-175 (410)
239 2vdw_A Vaccinia virus capping 99.0 2.4E-09 8.3E-14 107.6 14.5 119 311-436 48-175 (302)
240 2oyr_A UPF0341 protein YHIQ; a 99.0 3.8E-10 1.3E-14 111.2 8.3 93 303-397 78-177 (258)
241 3i53_A O-methyltransferase; CO 99.0 1.3E-09 4.5E-14 110.0 12.4 110 307-430 165-274 (332)
242 3cc8_A Putative methyltransfer 99.0 1E-09 3.5E-14 103.3 10.8 107 303-433 25-133 (230)
243 2bm8_A Cephalosporin hydroxyla 99.0 2.3E-10 7.9E-15 110.8 6.5 111 297-429 67-186 (236)
244 2ip2_A Probable phenazine-spec 99.0 1.4E-09 4.9E-14 109.7 11.8 117 298-429 155-271 (334)
245 3mcz_A O-methyltransferase; ad 99.0 1.7E-09 5.8E-14 109.9 12.2 117 302-430 169-287 (352)
246 3uzu_A Ribosomal RNA small sub 99.0 7.3E-10 2.5E-14 110.4 9.2 93 295-396 26-126 (279)
247 2qfm_A Spermine synthase; sper 99.0 1.3E-09 4.5E-14 111.9 10.2 121 311-433 188-317 (364)
248 3ftd_A Dimethyladenosine trans 99.0 7.6E-10 2.6E-14 108.4 8.1 92 295-396 15-107 (249)
249 4e2x_A TCAB9; kijanose, tetron 99.0 5.3E-09 1.8E-13 108.9 14.1 119 296-432 92-210 (416)
250 1qyr_A KSGA, high level kasuga 98.9 6.6E-10 2.3E-14 109.0 6.6 91 295-396 5-102 (252)
251 1vlm_A SAM-dependent methyltra 98.9 3.2E-09 1.1E-13 100.4 11.0 95 311-432 47-141 (219)
252 2zfu_A Nucleomethylin, cerebra 98.9 7.3E-09 2.5E-13 97.3 13.1 126 308-473 64-194 (215)
253 1af7_A Chemotaxis receptor met 98.9 9.8E-10 3.3E-14 109.2 7.1 112 311-429 105-251 (274)
254 2qe6_A Uncharacterized protein 98.9 1.4E-08 4.9E-13 100.4 15.4 107 311-431 77-197 (274)
255 3fzg_A 16S rRNA methylase; met 98.9 1.5E-09 5.1E-14 102.1 7.7 104 310-429 48-151 (200)
256 4fzv_A Putative methyltransfer 98.9 3.7E-09 1.3E-13 108.8 11.3 127 305-432 142-286 (359)
257 2aot_A HMT, histamine N-methyl 98.9 5.1E-09 1.8E-13 103.8 10.1 110 310-431 51-173 (292)
258 2xyq_A Putative 2'-O-methyl tr 98.9 2.3E-08 7.8E-13 100.1 14.1 115 308-444 60-188 (290)
259 3lst_A CALO1 methyltransferase 98.9 2.8E-08 9.7E-13 101.1 14.9 114 300-430 173-286 (348)
260 2cmg_A Spermidine synthase; tr 98.8 6.5E-09 2.2E-13 102.4 7.7 100 311-432 72-173 (262)
261 3opn_A Putative hemolysin; str 98.8 6.1E-09 2.1E-13 100.8 6.9 113 299-430 25-137 (232)
262 4a6d_A Hydroxyindole O-methylt 98.8 3.9E-08 1.3E-12 100.7 12.8 118 298-430 166-283 (353)
263 1g60_A Adenine-specific methyl 98.8 1.3E-08 4.5E-13 99.8 8.5 67 290-359 192-258 (260)
264 2wa2_A Non-structural protein 98.8 2.4E-09 8.3E-14 106.4 3.2 110 307-430 78-193 (276)
265 3hp7_A Hemolysin, putative; st 98.7 1.3E-08 4.3E-13 102.0 8.0 98 310-429 84-184 (291)
266 2oxt_A Nucleoside-2'-O-methylt 98.7 3E-09 1E-13 105.0 2.9 111 307-430 70-185 (265)
267 2zig_A TTHA0409, putative modi 98.7 1.9E-08 6.4E-13 100.6 8.4 66 290-358 215-280 (297)
268 2dir_A Thump domain-containing 98.7 1.9E-08 6.6E-13 84.5 7.0 59 218-276 32-91 (98)
269 3reo_A (ISO)eugenol O-methyltr 98.7 2.7E-08 9.3E-13 102.3 9.6 107 301-429 192-299 (368)
270 1vbk_A Hypothetical protein PH 98.7 9.7E-08 3.3E-12 96.3 13.2 59 219-277 108-167 (307)
271 3p9c_A Caffeic acid O-methyltr 98.7 5.5E-08 1.9E-12 99.9 11.0 108 300-429 189-297 (364)
272 1fp1_D Isoliquiritigenin 2'-O- 98.6 6.3E-08 2.2E-12 99.4 9.5 108 300-429 197-305 (372)
273 4auk_A Ribosomal RNA large sub 98.6 2.1E-06 7.1E-11 88.3 18.3 159 219-392 102-278 (375)
274 1fp2_A Isoflavone O-methyltran 98.5 1.7E-07 5.7E-12 95.5 9.2 100 309-430 186-288 (352)
275 2p41_A Type II methyltransfera 98.5 2E-07 7E-12 93.7 9.2 107 309-431 80-192 (305)
276 3giw_A Protein of unknown func 98.5 4.8E-07 1.6E-11 89.7 11.5 108 311-429 78-199 (277)
277 3sso_A Methyltransferase; macr 98.5 9.7E-08 3.3E-12 99.3 6.6 95 311-429 216-323 (419)
278 4azs_A Methyltransferase WBDD; 98.5 2.4E-07 8.3E-12 100.8 9.9 74 311-391 66-141 (569)
279 3frh_A 16S rRNA methylase; met 98.4 6.8E-07 2.3E-11 86.9 10.3 72 310-391 104-175 (253)
280 3lcv_B Sisomicin-gentamicin re 98.4 3E-07 1E-11 90.4 7.7 76 310-392 131-206 (281)
281 1zg3_A Isoflavanone 4'-O-methy 98.4 4.9E-07 1.7E-11 92.2 8.5 99 309-429 191-292 (358)
282 1boo_A Protein (N-4 cytosine-s 98.4 2.7E-07 9.3E-12 93.4 6.5 81 290-379 232-312 (323)
283 2ld4_A Anamorsin; methyltransf 98.4 4.2E-07 1.5E-11 82.7 6.4 105 308-445 9-128 (176)
284 1eg2_A Modification methylase 98.4 4.1E-07 1.4E-11 92.1 6.8 67 290-359 222-291 (319)
285 2c5s_A THII, probable thiamine 98.3 6E-07 2.1E-11 94.0 7.9 128 219-347 115-258 (413)
286 2oo3_A Protein involved in cat 98.3 3E-07 1E-11 91.2 4.8 102 312-431 92-199 (283)
287 1wg8_A Predicted S-adenosylmet 98.3 1.1E-06 3.6E-11 87.2 8.7 86 298-394 9-99 (285)
288 3o4f_A Spermidine synthase; am 98.3 1.8E-05 6E-10 79.2 17.5 151 311-466 83-242 (294)
289 4gqb_A Protein arginine N-meth 98.1 5.6E-06 1.9E-10 90.8 10.3 103 311-426 357-463 (637)
290 3ua3_A Protein arginine N-meth 98.0 1.3E-05 4.4E-10 88.4 9.7 103 312-426 410-530 (745)
291 2qy6_A UPF0209 protein YFCK; s 98.0 8.1E-06 2.8E-10 80.1 6.9 127 310-444 59-226 (257)
292 1g55_A DNA cytosine methyltran 97.7 4.3E-05 1.5E-09 77.9 7.3 72 313-394 3-78 (343)
293 3cvo_A Methyltransferase-like 97.7 0.00014 4.8E-09 68.8 9.4 112 295-427 16-151 (202)
294 3tka_A Ribosomal RNA small sub 97.7 3.6E-05 1.2E-09 78.1 5.4 86 300-394 46-138 (347)
295 2c7p_A Modification methylase 97.7 0.00017 5.8E-09 73.1 10.4 97 312-422 11-114 (327)
296 3g7u_A Cytosine-specific methy 97.6 0.00021 7.1E-09 73.8 10.5 97 313-422 3-113 (376)
297 3c6k_A Spermine synthase; sper 97.6 0.00028 9.6E-09 72.7 11.2 117 311-429 205-330 (381)
298 2zig_A TTHA0409, putative modi 97.6 0.00012 4E-09 72.9 7.5 65 367-432 21-99 (297)
299 3qv2_A 5-cytosine DNA methyltr 97.4 0.00043 1.5E-08 70.2 9.6 100 312-422 10-124 (327)
300 2k4m_A TR8_protein, UPF0146 pr 97.4 0.00014 4.9E-09 65.2 5.2 78 293-394 19-100 (153)
301 1i4w_A Mitochondrial replicati 97.2 0.00071 2.4E-08 69.3 8.5 95 294-396 35-154 (353)
302 3evf_A RNA-directed RNA polyme 97.2 0.0024 8.1E-08 62.9 11.7 110 308-428 71-182 (277)
303 1boo_A Protein (N-4 cytosine-s 97.1 0.00041 1.4E-08 70.0 5.6 66 367-433 14-87 (323)
304 1g60_A Adenine-specific methyl 97.1 0.00045 1.5E-08 67.4 5.1 64 369-433 6-77 (260)
305 2px2_A Genome polyprotein [con 97.0 0.00038 1.3E-08 67.9 3.9 101 309-428 71-181 (269)
306 2qrv_A DNA (cytosine-5)-methyl 97.0 0.0015 5.3E-08 65.1 8.2 76 309-394 13-93 (295)
307 2wk1_A NOVP; transferase, O-me 97.0 0.0037 1.3E-07 62.0 10.8 103 312-428 107-242 (282)
308 1eg2_A Modification methylase 96.8 0.0016 5.4E-08 65.7 6.5 64 368-432 39-108 (319)
309 3gcz_A Polyprotein; flavivirus 96.6 0.0014 4.7E-08 64.7 4.6 108 308-428 87-199 (282)
310 4h0n_A DNMT2; SAH binding, tra 96.6 0.0031 1.1E-07 64.0 7.3 72 313-394 4-79 (333)
311 3ubt_Y Modification methylase 96.6 0.0055 1.9E-07 61.2 8.7 96 314-422 2-104 (331)
312 3lkz_A Non-structural protein 96.5 0.014 4.9E-07 57.9 11.0 113 308-431 91-207 (321)
313 3p8z_A Mtase, non-structural p 96.5 0.019 6.4E-07 55.4 11.2 114 308-433 75-191 (267)
314 2efj_A 3,7-dimethylxanthine me 96.3 0.027 9.4E-07 58.1 12.1 112 312-431 53-226 (384)
315 3b5i_A S-adenosyl-L-methionine 96.2 0.018 6.1E-07 59.3 10.3 119 312-431 53-226 (374)
316 3eld_A Methyltransferase; flav 95.7 0.09 3.1E-06 52.2 12.3 107 309-428 79-189 (300)
317 3r24_A NSP16, 2'-O-methyl tran 95.6 0.029 9.8E-07 55.8 8.2 99 309-428 107-215 (344)
318 3me5_A Cytosine-specific methy 95.1 0.029 9.9E-07 59.6 6.9 73 312-393 88-178 (482)
319 1m6e_X S-adenosyl-L-methionnin 95.1 0.053 1.8E-06 55.5 8.6 132 295-431 32-210 (359)
320 3swr_A DNA (cytosine-5)-methyl 92.9 0.15 5E-06 58.8 7.2 43 312-356 540-584 (1002)
321 2py6_A Methyltransferase FKBM; 92.6 0.27 9.1E-06 50.9 8.3 49 309-357 224-274 (409)
322 1f8f_A Benzyl alcohol dehydrog 92.3 0.4 1.4E-05 48.3 9.0 102 305-430 184-289 (371)
323 4dkj_A Cytosine-specific methy 92.2 0.46 1.6E-05 49.2 9.5 45 313-357 11-60 (403)
324 4ej6_A Putative zinc-binding d 92.1 0.75 2.6E-05 46.5 10.8 104 303-430 174-284 (370)
325 4ft4_B DNA (cytosine-5)-methyl 91.8 0.2 6.8E-06 56.1 6.6 45 311-355 211-260 (784)
326 3fpc_A NADP-dependent alcohol 91.4 0.85 2.9E-05 45.5 10.2 108 299-430 154-266 (352)
327 3vyw_A MNMC2; tRNA wobble urid 90.9 0.97 3.3E-05 45.1 9.8 127 311-445 96-240 (308)
328 3two_A Mannitol dehydrogenase; 90.1 1.4 4.8E-05 43.9 10.4 100 300-430 165-265 (348)
329 1uuf_A YAHK, zinc-type alcohol 90.0 0.7 2.4E-05 46.7 8.2 102 303-430 186-288 (369)
330 3pvc_A TRNA 5-methylaminomethy 89.2 2.1 7.1E-05 47.0 11.8 128 311-445 58-225 (689)
331 1v3u_A Leukotriene B4 12- hydr 89.1 1.4 4.8E-05 43.4 9.4 101 305-430 139-244 (333)
332 3av4_A DNA (cytosine-5)-methyl 89.0 0.66 2.2E-05 54.9 7.9 44 311-356 850-895 (1330)
333 3m6i_A L-arabinitol 4-dehydrog 88.9 1.6 5.5E-05 43.6 9.8 103 303-430 171-283 (363)
334 2h6e_A ADH-4, D-arabinose 1-de 88.7 1.1 3.7E-05 44.6 8.4 106 300-430 155-269 (344)
335 4b7c_A Probable oxidoreductase 88.0 0.75 2.6E-05 45.5 6.6 102 305-430 143-248 (336)
336 4eez_A Alcohol dehydrogenase 1 88.0 1.7 5.8E-05 43.0 9.2 107 301-430 153-263 (348)
337 1piw_A Hypothetical zinc-type 87.1 1.5 5.3E-05 43.8 8.3 106 301-430 169-276 (360)
338 1pqw_A Polyketide synthase; ro 86.8 1.5 5.2E-05 39.6 7.4 101 306-431 33-138 (198)
339 3gms_A Putative NADPH:quinone 85.5 0.96 3.3E-05 44.9 5.8 101 305-430 138-243 (340)
340 2hcy_A Alcohol dehydrogenase 1 85.4 1.8 6.1E-05 43.1 7.7 106 301-430 159-269 (347)
341 4dvj_A Putative zinc-dependent 85.3 2 6.7E-05 43.2 8.0 101 305-429 160-269 (363)
342 2c0c_A Zinc binding alcohol de 83.7 3.9 0.00013 40.9 9.4 102 305-431 157-262 (362)
343 1vj0_A Alcohol dehydrogenase, 83.5 2.5 8.5E-05 42.7 7.9 103 304-430 187-298 (380)
344 3fwz_A Inner membrane protein 83.1 6.3 0.00021 33.6 9.3 104 314-444 9-118 (140)
345 3ip1_A Alcohol dehydrogenase, 82.7 8.6 0.0003 39.0 11.7 104 308-430 210-318 (404)
346 4a2c_A Galactitol-1-phosphate 82.2 5.9 0.0002 39.0 9.9 106 302-430 151-260 (346)
347 2dph_A Formaldehyde dismutase; 81.5 2.6 8.7E-05 42.9 7.1 52 300-352 174-227 (398)
348 3s2e_A Zinc-containing alcohol 81.1 3.9 0.00013 40.3 8.2 106 300-429 155-262 (340)
349 2d8a_A PH0655, probable L-thre 81.0 4.3 0.00015 40.3 8.4 102 304-430 161-267 (348)
350 3jyn_A Quinone oxidoreductase; 80.3 3.1 0.0001 40.9 7.0 100 306-430 135-239 (325)
351 3uko_A Alcohol dehydrogenase c 79.7 3.8 0.00013 41.2 7.7 103 305-430 187-295 (378)
352 3ps9_A TRNA 5-methylaminomethy 79.7 5 0.00017 43.8 9.1 128 311-445 66-233 (676)
353 4dup_A Quinone oxidoreductase; 78.4 3.5 0.00012 41.1 6.8 101 305-430 161-265 (353)
354 1kol_A Formaldehyde dehydrogen 77.0 6.1 0.00021 39.9 8.3 53 300-353 174-228 (398)
355 2zb4_A Prostaglandin reductase 76.9 4.9 0.00017 39.9 7.4 102 305-430 152-260 (357)
356 1qor_A Quinone oxidoreductase; 76.8 4.6 0.00016 39.6 7.1 100 306-430 135-239 (327)
357 3qwb_A Probable quinone oxidor 76.8 4.5 0.00016 39.8 7.1 99 307-430 144-247 (334)
358 1pl8_A Human sorbitol dehydrog 76.3 5.7 0.00019 39.5 7.7 103 304-430 164-273 (356)
359 2dq4_A L-threonine 3-dehydroge 75.7 2.4 8.3E-05 42.0 4.7 97 306-430 160-262 (343)
360 2b5w_A Glucose dehydrogenase; 74.7 8 0.00027 38.4 8.3 104 301-430 156-273 (357)
361 1e3j_A NADP(H)-dependent ketos 74.3 6.5 0.00022 39.0 7.5 105 302-430 159-271 (352)
362 2dpm_A M.dpnii 1, protein (ade 74.2 3.8 0.00013 40.1 5.6 35 312-350 36-70 (284)
363 1rjd_A PPM1P, carboxy methyl t 72.7 37 0.0013 33.8 12.6 48 310-358 96-143 (334)
364 1yqd_A Sinapyl alcohol dehydro 72.6 6.5 0.00022 39.3 7.1 105 300-430 175-282 (366)
365 3fbg_A Putative arginate lyase 72.6 8 0.00027 38.3 7.7 101 305-430 138-248 (346)
366 4dcm_A Ribosomal RNA large sub 71.3 60 0.002 32.6 14.0 102 311-433 38-139 (375)
367 2cdc_A Glucose dehydrogenase g 71.0 13 0.00043 37.1 8.8 98 306-430 166-278 (366)
368 1xa0_A Putative NADPH dependen 70.9 7.1 0.00024 38.2 6.8 98 307-429 144-245 (328)
369 2cf5_A Atccad5, CAD, cinnamyl 70.6 5.2 0.00018 39.9 5.8 104 301-430 169-275 (357)
370 1jvb_A NAD(H)-dependent alcoho 69.7 9.9 0.00034 37.5 7.6 108 300-430 159-271 (347)
371 4fgs_A Probable dehydrogenase 69.3 27 0.00091 33.8 10.4 109 311-431 28-160 (273)
372 3tqh_A Quinone oxidoreductase; 69.2 13 0.00043 36.3 8.2 104 299-431 140-246 (321)
373 2g1p_A DNA adenine methylase; 69.0 4.9 0.00017 39.2 5.0 33 312-348 28-60 (278)
374 1tt7_A YHFP; alcohol dehydroge 68.1 8.3 0.00028 37.7 6.6 99 307-430 145-247 (330)
375 3jv7_A ADH-A; dehydrogenase, n 67.9 7.8 0.00027 38.2 6.4 99 308-430 168-270 (345)
376 4eso_A Putative oxidoreductase 66.0 43 0.0015 31.3 10.9 110 311-431 7-139 (255)
377 3uog_A Alcohol dehydrogenase; 65.5 12 0.00042 37.2 7.3 101 305-430 183-287 (363)
378 3t7c_A Carveol dehydrogenase; 65.4 26 0.00088 33.7 9.5 77 311-394 27-127 (299)
379 3nx4_A Putative oxidoreductase 64.4 15 0.00053 35.5 7.7 96 308-430 142-241 (324)
380 4g81_D Putative hexonate dehyd 64.2 56 0.0019 31.1 11.5 77 311-394 8-96 (255)
381 1rjw_A ADH-HT, alcohol dehydro 63.9 19 0.00065 35.4 8.3 106 300-430 153-261 (339)
382 4fs3_A Enoyl-[acyl-carrier-pro 63.8 33 0.0011 32.2 9.8 79 311-394 5-96 (256)
383 1yf3_A DNA adenine methylase; 63.3 4.3 0.00015 39.1 3.3 34 312-350 25-58 (259)
384 3tos_A CALS11; methyltransfera 62.7 1.1E+02 0.0037 29.3 13.2 103 311-428 70-215 (257)
385 1zkd_A DUF185; NESG, RPR58, st 62.2 28 0.00097 35.5 9.3 45 312-356 81-132 (387)
386 3pxx_A Carveol dehydrogenase; 61.0 80 0.0027 29.5 12.0 113 311-431 9-154 (287)
387 4fn4_A Short chain dehydrogena 60.9 65 0.0022 30.6 11.2 76 311-393 6-93 (254)
388 3ek2_A Enoyl-(acyl-carrier-pro 59.8 46 0.0016 30.8 9.9 113 311-431 13-154 (271)
389 3tjr_A Short chain dehydrogena 59.6 56 0.0019 31.3 10.7 78 311-395 30-119 (301)
390 1wma_A Carbonyl reductase [NAD 59.1 56 0.0019 30.0 10.4 113 312-432 4-140 (276)
391 3dmg_A Probable ribosomal RNA 58.6 1.5E+02 0.005 29.8 14.0 132 311-468 45-176 (381)
392 3o38_A Short chain dehydrogena 58.2 78 0.0027 29.3 11.2 79 311-395 21-112 (266)
393 4a27_A Synaptic vesicle membra 57.4 12 0.0004 37.1 5.4 99 305-430 136-238 (349)
394 3oig_A Enoyl-[acyl-carrier-pro 56.7 95 0.0032 28.7 11.5 115 311-431 6-148 (266)
395 2eih_A Alcohol dehydrogenase; 56.4 23 0.0008 34.7 7.4 99 307-430 162-265 (343)
396 3ioy_A Short-chain dehydrogena 56.3 1E+02 0.0036 29.7 12.2 79 311-394 7-97 (319)
397 3sx2_A Putative 3-ketoacyl-(ac 56.2 67 0.0023 30.1 10.5 78 311-395 12-113 (278)
398 1h2b_A Alcohol dehydrogenase; 56.2 25 0.00086 34.8 7.7 47 307-353 182-229 (359)
399 1cdo_A Alcohol dehydrogenase; 55.1 15 0.0005 36.7 5.7 48 305-353 186-235 (374)
400 3lf2_A Short chain oxidoreduct 55.0 1.1E+02 0.0038 28.4 11.7 80 311-395 7-98 (265)
401 2j3h_A NADP-dependent oxidored 54.8 16 0.00054 35.8 5.9 102 305-430 149-255 (345)
402 1xg5_A ARPG836; short chain de 54.4 63 0.0021 30.3 9.9 78 312-394 32-121 (279)
403 3l77_A Short-chain alcohol deh 53.9 52 0.0018 29.8 9.0 76 313-395 3-91 (235)
404 2dpm_A M.dpnii 1, protein (ade 52.7 55 0.0019 31.7 9.3 41 345-395 156-198 (284)
405 2jhf_A Alcohol dehydrogenase E 52.7 17 0.00058 36.2 5.7 48 305-353 185-234 (374)
406 4f3n_A Uncharacterized ACR, CO 52.4 15 0.0005 38.2 5.3 69 289-357 111-188 (432)
407 3ftp_A 3-oxoacyl-[acyl-carrier 52.1 53 0.0018 30.9 9.0 77 311-394 27-115 (270)
408 3grk_A Enoyl-(acyl-carrier-pro 51.9 1.6E+02 0.0055 27.9 12.8 113 311-431 30-170 (293)
409 1e3i_A Alcohol dehydrogenase, 51.7 17 0.0006 36.1 5.7 48 305-353 189-238 (376)
410 1p0f_A NADP-dependent alcohol 51.7 14 0.00049 36.7 5.0 48 305-353 185-234 (373)
411 2fzw_A Alcohol dehydrogenase c 51.4 15 0.0005 36.6 5.0 48 305-353 184-233 (373)
412 3ucx_A Short chain dehydrogena 51.1 1.1E+02 0.0036 28.5 10.9 75 311-392 10-96 (264)
413 3pk0_A Short-chain dehydrogena 51.0 37 0.0013 31.8 7.6 77 312-394 10-98 (262)
414 3h7a_A Short chain dehydrogena 51.0 79 0.0027 29.3 9.9 78 311-395 6-94 (252)
415 2hwk_A Helicase NSP2; rossman 50.8 27 0.00091 34.4 6.4 58 372-431 195-255 (320)
416 4egf_A L-xylulose reductase; s 50.8 56 0.0019 30.6 8.9 77 312-395 20-109 (266)
417 3llv_A Exopolyphosphatase-rela 50.6 19 0.00065 30.2 5.0 67 313-393 7-79 (141)
418 3k31_A Enoyl-(acyl-carrier-pro 50.0 73 0.0025 30.4 9.7 113 311-431 29-169 (296)
419 3goh_A Alcohol dehydrogenase, 49.2 11 0.00036 36.7 3.5 95 304-431 135-230 (315)
420 3l6e_A Oxidoreductase, short-c 49.2 58 0.002 29.9 8.6 73 313-395 4-88 (235)
421 1yf3_A DNA adenine methylase; 49.1 16 0.00055 35.0 4.7 28 367-396 149-176 (259)
422 3sju_A Keto reductase; short-c 48.2 1.1E+02 0.0037 28.8 10.6 77 311-394 23-111 (279)
423 4ibo_A Gluconate dehydrogenase 48.1 51 0.0017 31.1 8.1 77 311-394 25-113 (271)
424 3uve_A Carveol dehydrogenase ( 47.7 1.1E+02 0.0039 28.6 10.6 78 311-395 10-115 (286)
425 3gqv_A Enoyl reductase; medium 47.3 50 0.0017 32.8 8.3 96 310-430 163-263 (371)
426 3gaf_A 7-alpha-hydroxysteroid 47.2 1.3E+02 0.0044 27.8 10.7 77 311-394 11-99 (256)
427 1xu9_A Corticosteroid 11-beta- 46.8 64 0.0022 30.4 8.6 74 312-391 28-113 (286)
428 3tfo_A Putative 3-oxoacyl-(acy 46.7 1.2E+02 0.0042 28.4 10.6 76 312-394 4-91 (264)
429 3r3s_A Oxidoreductase; structu 46.4 1.4E+02 0.0046 28.4 11.0 113 311-431 48-186 (294)
430 4dry_A 3-oxoacyl-[acyl-carrier 46.2 1E+02 0.0034 29.2 9.9 78 311-394 32-121 (281)
431 3v8b_A Putative dehydrogenase, 46.1 1.3E+02 0.0045 28.3 10.8 77 311-394 27-115 (283)
432 1yb5_A Quinone oxidoreductase; 46.1 33 0.0011 33.9 6.6 100 306-430 165-269 (351)
433 3ijr_A Oxidoreductase, short c 46.0 1.2E+02 0.0042 28.6 10.6 113 311-431 46-183 (291)
434 1ja9_A 4HNR, 1,3,6,8-tetrahydr 45.9 53 0.0018 30.4 7.8 77 312-395 21-110 (274)
435 4eye_A Probable oxidoreductase 45.8 21 0.00071 35.2 5.0 100 305-430 153-257 (342)
436 3svt_A Short-chain type dehydr 45.4 1.4E+02 0.0049 27.8 10.9 80 311-394 10-101 (281)
437 1zsy_A Mitochondrial 2-enoyl t 44.3 60 0.0021 31.9 8.2 39 306-345 162-203 (357)
438 3t4x_A Oxidoreductase, short c 44.2 1.5E+02 0.0053 27.4 10.9 78 312-394 10-95 (267)
439 3c85_A Putative glutathione-re 44.2 1.1E+02 0.0039 26.5 9.4 104 312-442 39-150 (183)
440 1yb1_A 17-beta-hydroxysteroid 44.1 90 0.0031 29.1 9.2 78 311-395 30-119 (272)
441 3rkr_A Short chain oxidoreduct 44.0 1.6E+02 0.0054 27.2 10.9 77 311-394 28-116 (262)
442 3l4b_C TRKA K+ channel protien 44.0 45 0.0015 30.2 6.8 61 320-391 6-72 (218)
443 3imf_A Short chain dehydrogena 44.0 91 0.0031 28.9 9.1 75 312-393 6-92 (257)
444 3edm_A Short chain dehydrogena 44.0 1.4E+02 0.0048 27.6 10.5 113 311-431 7-144 (259)
445 2j8z_A Quinone oxidoreductase; 43.5 47 0.0016 32.7 7.3 100 306-430 157-261 (354)
446 3guy_A Short-chain dehydrogena 43.4 96 0.0033 28.0 9.0 71 315-395 4-83 (230)
447 1oaa_A Sepiapterin reductase; 43.1 1.7E+02 0.0059 26.7 10.9 78 312-394 6-102 (259)
448 1gu7_A Enoyl-[acyl-carrier-pro 42.7 40 0.0014 33.2 6.6 38 307-345 162-202 (364)
449 2jah_A Clavulanic acid dehydro 42.7 1.4E+02 0.005 27.2 10.3 76 312-394 7-94 (247)
450 3is3_A 17BETA-hydroxysteroid d 42.5 1.6E+02 0.0053 27.4 10.6 113 311-431 17-153 (270)
451 3v2g_A 3-oxoacyl-[acyl-carrier 42.4 2.1E+02 0.0071 26.7 11.5 113 311-431 30-166 (271)
452 3l9w_A Glutathione-regulated p 42.1 1.3E+02 0.0044 30.6 10.5 95 314-434 6-106 (413)
453 1ae1_A Tropinone reductase-I; 42.0 1.7E+02 0.0059 27.1 10.9 77 311-394 20-109 (273)
454 2g1p_A DNA adenine methylase; 41.8 29 0.00098 33.6 5.2 28 367-395 157-185 (278)
455 1e7w_A Pteridine reductase; di 41.4 2.2E+02 0.0077 26.7 11.7 60 312-378 9-72 (291)
456 3u5t_A 3-oxoacyl-[acyl-carrier 41.4 1.3E+02 0.0045 28.0 9.9 114 311-432 26-163 (267)
457 2ae2_A Protein (tropinone redu 40.9 1.9E+02 0.0064 26.6 10.8 76 312-394 9-97 (260)
458 4imr_A 3-oxoacyl-(acyl-carrier 40.8 69 0.0023 30.3 7.8 77 311-394 32-119 (275)
459 3gvc_A Oxidoreductase, probabl 40.7 1.6E+02 0.0056 27.6 10.5 74 311-394 28-113 (277)
460 1xhl_A Short-chain dehydrogena 40.4 1E+02 0.0035 29.4 9.0 80 311-394 25-116 (297)
461 3pgx_A Carveol dehydrogenase; 40.3 1.8E+02 0.0062 27.1 10.7 77 311-394 14-115 (280)
462 1wly_A CAAR, 2-haloacrylate re 40.3 49 0.0017 32.1 6.8 100 306-430 140-244 (333)
463 3oid_A Enoyl-[acyl-carrier-pro 40.2 1.1E+02 0.0039 28.2 9.2 76 312-394 4-92 (258)
464 3ksu_A 3-oxoacyl-acyl carrier 39.9 1.1E+02 0.0038 28.5 9.0 114 311-432 10-149 (262)
465 4e6p_A Probable sorbitol dehyd 39.8 2E+02 0.0067 26.5 10.8 74 311-394 7-92 (259)
466 4dyv_A Short-chain dehydrogena 39.5 1.4E+02 0.0048 28.0 9.7 73 312-394 28-112 (272)
467 1spx_A Short-chain reductase f 39.4 48 0.0016 31.0 6.4 79 312-394 6-96 (278)
468 2qq5_A DHRS1, dehydrogenase/re 38.8 2.2E+02 0.0074 26.1 10.9 74 312-392 5-91 (260)
469 3tsc_A Putative oxidoreductase 38.7 2.1E+02 0.007 26.6 10.8 78 311-395 10-112 (277)
470 2pd4_A Enoyl-[acyl-carrier-pro 38.6 1.7E+02 0.0059 27.1 10.2 112 312-431 6-145 (275)
471 3nyw_A Putative oxidoreductase 38.5 2.3E+02 0.008 25.9 11.7 80 311-394 6-97 (250)
472 4da9_A Short-chain dehydrogena 38.3 2.3E+02 0.008 26.4 11.2 77 311-394 28-117 (280)
473 4dqx_A Probable oxidoreductase 38.0 2.1E+02 0.0073 26.7 10.8 75 311-395 26-112 (277)
474 1id1_A Putative potassium chan 37.8 1.1E+02 0.0038 25.7 8.0 94 320-434 9-109 (153)
475 3uf0_A Short-chain dehydrogena 37.6 1.4E+02 0.0047 28.0 9.3 76 311-394 30-116 (273)
476 3iup_A Putative NADPH:quinone 37.5 27 0.00092 35.0 4.4 57 295-353 155-214 (379)
477 1iz0_A Quinone oxidoreductase; 36.8 28 0.00097 33.3 4.3 95 306-430 121-218 (302)
478 2p91_A Enoyl-[acyl-carrier-pro 36.7 2.1E+02 0.0072 26.7 10.6 77 311-394 20-109 (285)
479 3lyl_A 3-oxoacyl-(acyl-carrier 36.4 2.4E+02 0.0082 25.4 12.1 77 312-395 5-93 (247)
480 3rih_A Short chain dehydrogena 35.9 52 0.0018 31.6 6.1 78 311-394 40-129 (293)
481 2qhx_A Pteridine reductase 1; 35.8 2.5E+02 0.0087 27.0 11.2 60 312-378 46-109 (328)
482 3ged_A Short-chain dehydrogena 35.4 1E+02 0.0035 29.0 8.0 71 313-394 3-85 (247)
483 2h7i_A Enoyl-[acyl-carrier-pro 35.4 67 0.0023 30.0 6.7 111 311-431 6-149 (269)
484 3oec_A Carveol dehydrogenase ( 34.9 2.7E+02 0.0091 26.6 11.2 77 311-394 45-145 (317)
485 3tox_A Short chain dehydrogena 34.3 1.5E+02 0.0051 28.0 9.0 76 311-393 7-94 (280)
486 1hxh_A 3BETA/17BETA-hydroxyste 34.2 1.6E+02 0.0055 27.0 9.1 73 312-394 6-90 (253)
487 1geg_A Acetoin reductase; SDR 33.5 2.2E+02 0.0075 26.0 9.9 74 314-394 4-89 (256)
488 3f1l_A Uncharacterized oxidore 33.4 2.8E+02 0.0096 25.3 11.5 78 311-394 11-102 (252)
489 3op4_A 3-oxoacyl-[acyl-carrier 33.2 2.5E+02 0.0087 25.5 10.3 74 311-394 8-93 (248)
490 1xkq_A Short-chain reductase f 32.6 2E+02 0.0067 26.8 9.5 79 312-394 6-96 (280)
491 4dmm_A 3-oxoacyl-[acyl-carrier 32.1 1.9E+02 0.0064 26.9 9.3 77 311-394 27-116 (269)
492 4fc7_A Peroxisomal 2,4-dienoyl 31.9 2.7E+02 0.0092 25.9 10.4 77 311-393 26-114 (277)
493 2uyo_A Hypothetical protein ML 31.9 3.6E+02 0.012 26.1 13.7 104 313-429 104-217 (310)
494 3osu_A 3-oxoacyl-[acyl-carrier 31.8 2E+02 0.007 26.1 9.3 76 313-395 5-93 (246)
495 4iin_A 3-ketoacyl-acyl carrier 31.7 1.4E+02 0.0047 27.8 8.2 78 311-395 28-118 (271)
496 3r1i_A Short-chain type dehydr 31.6 1.7E+02 0.0057 27.5 8.8 77 311-394 31-119 (276)
497 1gee_A Glucose 1-dehydrogenase 31.4 1.4E+02 0.0047 27.3 8.1 76 312-394 7-95 (261)
498 1xq1_A Putative tropinone redu 31.3 1.5E+02 0.0053 27.1 8.5 76 312-394 14-102 (266)
499 3sc4_A Short chain dehydrogena 31.3 1.7E+02 0.0058 27.5 8.9 114 311-431 8-152 (285)
500 3krt_A Crotonyl COA reductase; 31.2 78 0.0027 32.4 6.8 46 307-353 224-271 (456)
No 1
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=100.00 E-value=3.7e-62 Score=509.64 Aligned_cols=325 Identities=20% Similarity=0.269 Sum_probs=283.0
Q ss_pred ceEEEEEEcCCChHHHHHHHHHHHhCCccceEEEcCeEEEEeChhhHHHHh-hhhhhhhhhhhhhcccccCCCCCCCccC
Q psy19 15 KQITIEATVVTGFEDVVVEECQEKFGKDLLLMKSIGRVFFNIDLKDIEKVK-ELRGIDNILFIIATFENFGFSNKGTEED 93 (494)
Q Consensus 15 ~~~~~~~t~~~GlE~~~~~E~~~kl~~~~~~~~~~G~V~F~~~~~~~~~~~-~lR~a~rl~~~l~~~~~~~~~~~~~~~~ 93 (494)
+.++|||||++|||.+|++||++ ||. ++...+|+|+|+++++++|++| |||+|+||++++++|++.++
T Consensus 3 ~~~~~~a~~~~GlE~~la~El~~-lG~--~~~~~~g~V~f~gd~~~~~~~~l~~R~a~RVl~~l~~f~a~~~-------- 71 (384)
T 3ldg_A 3 KTFNLVATAAAGIEAVVGKELRN-LGL--DCQVENGRVLFKGNIETIAKSNLWLRSADRIKIVVGEFPARTF-------- 71 (384)
T ss_dssp CSEEEEEECCTTCHHHHHHHHHH-TTC--CCEEETTEEEEEECHHHHHHHHHHCSSCSEEEEEEEEEECSSH--------
T ss_pred ccEEEEEECChhHHHHHHHHHHh-CCC--CcEEeeeEEEEEECHHHHHHHHhhcccceeEEEEEEEEecCCH--------
Confidence 34899999999999999999999 997 6888999999999999999999 99999999999999876543
Q ss_pred CCCCcchhhHHhhhhhHHHHHHhhhccCchhhHHHhhhhhccCCCcCcchhhccchhhhhhhccccchhhcccccCccCc
Q psy19 94 SGQKDESDLLKDKLKDVATIQNKVLEIDWKKYMEIWKQITNYNGVLYPSIEQFNKYNDILRHKKSIRNEINIKKESSCET 173 (494)
Q Consensus 94 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~W~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (494)
++ ||+.|+.++|+++|...
T Consensus 72 --------------~~---Ly~~~~~i~W~~~l~~~-------------------------------------------- 90 (384)
T 3ldg_A 72 --------------EE---LFQGVYALDWENYLPLG-------------------------------------------- 90 (384)
T ss_dssp --------------HH---HHHHHHHSCGGGTCCTT--------------------------------------------
T ss_pred --------------HH---HHHHHHcCCHHHhCCCC--------------------------------------------
Confidence 23 99999999999864421
Q ss_pred ccccccchhccccchhhhhhhhhhhcccccccccCCCCCCCCcceEEEE-EEEEecCcccChHHHHHHHHHHHHhhcCC-
Q psy19 174 EPQVNNVQIEKGDLQNQELKEIDINSMCSSQNQKTNFTNPEENLLKFRV-TCNRVGKHTVTSMESERAFGGKLNDTYFW- 251 (494)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tFrV-~~~~~g~~~~~s~~~~~~v~~aI~d~~~~- 251 (494)
.||+| ++++.++|.|++.++++++|+||+|+++.
T Consensus 91 --------------------------------------------~tf~V~~~~~~~s~~~~s~~~~~~vkdAi~d~~~~~ 126 (384)
T 3ldg_A 91 --------------------------------------------CQFPVAKAKSVKSKLHNEPSIQGITKKAIVKKLQHY 126 (384)
T ss_dssp --------------------------------------------CBCCBCCCEEESCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------CeEEEEeeeecCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 27999 88888889999999999999999998842
Q ss_pred -----C--CCCCCCCEEEEEEEecCcceeccccccccccccccc-ccccccchHHHHHHHHHHhCCCCCCEEEEEcCCcC
Q psy19 252 -----L--VDLDDYDIDINLQIRYNEAYVGLPVTQTSLHRRNIV-EFNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGG 323 (494)
Q Consensus 252 -----~--vdl~~pdi~i~v~l~~~~~~l~l~lsg~sL~~Rgy~-~~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSG 323 (494)
. ||+++||++|++++.+|.+++++|+||++||+|||+ ..++|||+|+||++|+.+++|+++.+|+|||||||
T Consensus 127 ~~~r~~~~v~~~~pd~~i~v~~~~~~~~~~ld~sg~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSG 206 (384)
T 3ldg_A 127 FHRPDSVPLPENGPEFKIEISLLKDQARVMIDTTGPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSG 206 (384)
T ss_dssp TTCCTTSCCCCCSCBCEEEEEEETTEEEEEEESSSSCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTS
T ss_pred hCCCCccccCCCCCCEEEEEEEECCEEEEEEeccCCcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCC
Confidence 3 999999999999999999999999999999999997 56899999999999999999999999999999999
Q ss_pred hHHHHHHhcCCC--------------------------------------CeEEEEeCCHHHHHHHHHHHHhccCCCCcc
Q psy19 324 TIPVECSLSYPH--------------------------------------TFFVCGDINEKLVLKTQANVLHNSGNLNRE 365 (494)
Q Consensus 324 tilIEAA~~~~~--------------------------------------~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~ 365 (494)
||+||||++..+ ..++|+|+|+.|++.|++|+..+|+ .
T Consensus 207 t~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl----~ 282 (384)
T 3ldg_A 207 TFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGL----E 282 (384)
T ss_dssp HHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTC----T
T ss_pred HHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCC----C
Confidence 999999986322 4599999999999999999998875 4
Q ss_pred cceeeeeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHhccc
Q psy19 366 LKVSPLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITSA 445 (494)
Q Consensus 366 ~~i~~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~~~~ 445 (494)
+.+.+.++|+.+++.+ ..||+||+|||||.|++...++..+|+.+.+.+.+ .+| |+++++|++.. +.+.++
T Consensus 283 ~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~--~~g-~~~~iit~~~~-l~~~~g---- 353 (384)
T 3ldg_A 283 DVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAP--LKT-WSQFILTNDTD-FEQKFG---- 353 (384)
T ss_dssp TTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT--CTT-SEEEEEESCTT-HHHHHT----
T ss_pred CceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh--CCC-cEEEEEECCHH-HHHHhC----
Confidence 5689999999998765 58999999999999998877888888864333332 247 99999999987 566665
Q ss_pred cceeeeeEEEccCCceEEEEEEee
Q psy19 446 LWKCRKQIKINMSGMKSFVFILNR 469 (494)
Q Consensus 446 l~~~~~~~~v~~Ggl~~~i~v~~~ 469 (494)
++..+++.++||+++|++|.|.-
T Consensus 354 -~~~~~~~~l~nG~l~~~~~~~~~ 376 (384)
T 3ldg_A 354 -RKADKKRKLYNGSLKVDLYQFYG 376 (384)
T ss_dssp -SCCSEEEEEEETTEEEEEEEECC
T ss_pred -CCccceeEEecCCEEEEEEEEEC
Confidence 57889999999999999999863
No 2
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=100.00 E-value=1.2e-60 Score=499.94 Aligned_cols=324 Identities=21% Similarity=0.294 Sum_probs=280.8
Q ss_pred eEEEEEEcCCChHHHHHHHHHHHhCCccceEEEcCeEEEEeChhhHHHHh-hhhhhhhhhhhhhcccccCCCCCCCccCC
Q psy19 16 QITIEATVVTGFEDVVVEECQEKFGKDLLLMKSIGRVFFNIDLKDIEKVK-ELRGIDNILFIIATFENFGFSNKGTEEDS 94 (494)
Q Consensus 16 ~~~~~~t~~~GlE~~~~~E~~~kl~~~~~~~~~~G~V~F~~~~~~~~~~~-~lR~a~rl~~~l~~~~~~~~~~~~~~~~~ 94 (494)
.++|+|||++|||.+|++||++ ||. .+...+|+|+|++++++++++| |||+|+|||+++++|++.++
T Consensus 14 ~~~~~at~~~GlE~~la~El~~-lG~--~v~~~~g~V~f~g~~~~~~r~~l~~R~a~RVl~~l~~f~a~~~--------- 81 (393)
T 3k0b_A 14 SFQLVATAASGLEAIVGKEVAR-LGY--DPKVENGKVYFEGDLSAIARANLWLRVADRVKIVVGVFKATTF--------- 81 (393)
T ss_dssp CEEEEEECCTTCHHHHHHHHHH-TTC--CCEEETTEEEEEECHHHHHHHHHHCSSCSCEEEEEEEEECSSH---------
T ss_pred ceEEEEECCccHHHHHHHHHHh-CCC--CcEEeccEEEEEECHHHHHHHHhcccceeeEEEEEEEEecCCH---------
Confidence 4799999999999999999999 986 6888999999999999999999 99999999999999876543
Q ss_pred CCCcchhhHHhhhhhHHHHHHhhhccCchhhHHHhhhhhccCCCcCcchhhccchhhhhhhccccchhhcccccCccCcc
Q psy19 95 GQKDESDLLKDKLKDVATIQNKVLEIDWKKYMEIWKQITNYNGVLYPSIEQFNKYNDILRHKKSIRNEINIKKESSCETE 174 (494)
Q Consensus 95 ~~~~~~~~~~~~l~~~~~l~~~~~~~~W~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (494)
++ ||+.++.++|++++...
T Consensus 82 -------------~~---L~~~~~~i~w~~~l~~~--------------------------------------------- 100 (393)
T 3k0b_A 82 -------------DE---LFEKTKALPWEDYLPLD--------------------------------------------- 100 (393)
T ss_dssp -------------HH---HHHHHHTSCGGGTCCTT---------------------------------------------
T ss_pred -------------HH---HHHHHHhCCHHHhCCCC---------------------------------------------
Confidence 23 99999999999864321
Q ss_pred cccccchhccccchhhhhhhhhhhcccccccccCCCCCCCCcceEEEEEEEEecCcccChHHHHHHHHHHHHhhcC----
Q psy19 175 PQVNNVQIEKGDLQNQELKEIDINSMCSSQNQKTNFTNPEENLLKFRVTCNRVGKHTVTSMESERAFGGKLNDTYF---- 250 (494)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tFrV~~~~~g~~~~~s~~~~~~v~~aI~d~~~---- 250 (494)
.||+|++++.++|.|++.++++++|+||+|+++
T Consensus 101 -------------------------------------------~tF~V~~~~~~s~~fss~~~~~~vkdAI~d~~~~~~~ 137 (393)
T 3k0b_A 101 -------------------------------------------AQFPVAGKSVKSTLYSVPDCQAIVKKAIVNRVSEKYR 137 (393)
T ss_dssp -------------------------------------------CBCCEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------------------CeEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 279999999999999999999999999999874
Q ss_pred C--CCCCCCCCEEEEEEEecCcceeccccccccccccccc-ccccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHH
Q psy19 251 W--LVDLDDYDIDINLQIRYNEAYVGLPVTQTSLHRRNIV-EFNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPV 327 (494)
Q Consensus 251 ~--~vdl~~pdi~i~v~l~~~~~~l~l~lsg~sL~~Rgy~-~~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilI 327 (494)
. .||+++||++|++++.++.+++++|++|++||+|||+ ..++|||+|+||++|+.+++|.++.+|||||||||||+|
T Consensus 138 ~rp~vd~~~Pd~~i~v~l~~~~~~~~ld~sg~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~i 217 (393)
T 3k0b_A 138 RSGRLMETGALFKLEVSILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPI 217 (393)
T ss_dssp TCTTCCSCSSBCCEEEEEETTEEEEEEESSSSCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHH
T ss_pred CCCCCCCCCCCEEEEEEEECCEEEEEEecCCCcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHH
Confidence 2 6999999999999999999999999999999999997 668999999999999999999999999999999999999
Q ss_pred HHHhcCCC--------------------------------------CeEEEEeCCHHHHHHHHHHHHhccCCCCccccee
Q psy19 328 ECSLSYPH--------------------------------------TFFVCGDINEKLVLKTQANVLHNSGNLNRELKVS 369 (494)
Q Consensus 328 EAA~~~~~--------------------------------------~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~ 369 (494)
|||++..+ ..|+|+|+|+.|++.|+.|+..+|+ .+.+.
T Consensus 218 eaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl----~~~I~ 293 (393)
T 3k0b_A 218 EAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGL----GDLIT 293 (393)
T ss_dssp HHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTC----TTCSE
T ss_pred HHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCC----CCceE
Confidence 99986332 4599999999999999999998876 34578
Q ss_pred eeeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHhcccccee
Q psy19 370 PLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITSALWKC 449 (494)
Q Consensus 370 ~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~~~~l~~~ 449 (494)
+.++|+.+++.+ .+||+||+|||||.+++...++..+|+.+.+.+.. -+| |+++++|++.. +.+.++ .+.
T Consensus 294 ~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~--~~g-~~~~iit~~~~-l~~~~g-----~~~ 363 (393)
T 3k0b_A 294 FRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR--MPT-WSVYVLTSYEL-FEEVYG-----KKA 363 (393)
T ss_dssp EEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT--CTT-CEEEEEECCTT-HHHHHT-----SCC
T ss_pred EEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc--CCC-CEEEEEECCHH-HHHHhC-----CCc
Confidence 999999998765 58999999999999988766778888864433332 247 99999999987 566665 478
Q ss_pred eeeEEEccCCceEEEEEEee
Q psy19 450 RKQIKINMSGMKSFVFILNR 469 (494)
Q Consensus 450 ~~~~~v~~Ggl~~~i~v~~~ 469 (494)
.+++.++||+++|++|.|.-
T Consensus 364 ~~~~~l~nG~l~~~~~~~~~ 383 (393)
T 3k0b_A 364 TKKRKLYNGYLRTDLYQYWG 383 (393)
T ss_dssp SEEEEEC----CEEEEEECC
T ss_pred ccceEEecCCEEEEEEEEEC
Confidence 89999999999999999863
No 3
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=100.00 E-value=4.6e-59 Score=486.74 Aligned_cols=322 Identities=21% Similarity=0.299 Sum_probs=282.4
Q ss_pred eEEEEEEcCCChHHHHHHHHHHHhCCccceEEEcCeEEEEeChhhHHHHh-hhhhhhhhhhhhhcccccCCCCCCCccCC
Q psy19 16 QITIEATVVTGFEDVVVEECQEKFGKDLLLMKSIGRVFFNIDLKDIEKVK-ELRGIDNILFIIATFENFGFSNKGTEEDS 94 (494)
Q Consensus 16 ~~~~~~t~~~GlE~~~~~E~~~kl~~~~~~~~~~G~V~F~~~~~~~~~~~-~lR~a~rl~~~l~~~~~~~~~~~~~~~~~ 94 (494)
.++|+|||++|||.+|++||++ ||.. .+...+|+|+|+++++++|++| |||+|+||++++++|++.+++
T Consensus 6 ~~~~~at~~~GlE~~l~~El~~-Lg~~-~~~~~~g~V~f~g~~~~~~~~~l~~R~a~RVl~~l~~f~~~~~~-------- 75 (385)
T 3ldu_A 6 NYTLISPCFFGMEKMLAREITN-LGYE-IIKTEDGRITYKTDEFGIAKSNMWLRCAERVHLKIAEFEAKSFD-------- 75 (385)
T ss_dssp CEEEEEECCTTCHHHHHHHHHH-TTCE-EEEEETTEEEEEECTTHHHHHHHHCSSCSCCEEEEEEEECSSHH--------
T ss_pred ceEEEEECChhHHHHHHHHHHh-cCCC-ceEEeccEEEEEECHHHHHHHHhccCceeEEEEEeeeEecCCHH--------
Confidence 4799999999999999999999 9965 6888999999999999999999 999999999999998665432
Q ss_pred CCCcchhhHHhhhhhHHHHHHhhhccCchhhHHHhhhhhccCCCcCcchhhccchhhhhhhccccchhhcccccCccCcc
Q psy19 95 GQKDESDLLKDKLKDVATIQNKVLEIDWKKYMEIWKQITNYNGVLYPSIEQFNKYNDILRHKKSIRNEINIKKESSCETE 174 (494)
Q Consensus 95 ~~~~~~~~~~~~l~~~~~l~~~~~~~~W~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (494)
+ ||+.++.++|+++|...
T Consensus 76 --------------~---L~~~~~~i~w~~~~~~~--------------------------------------------- 93 (385)
T 3ldu_A 76 --------------E---LFENTKRINWSRYIPYG--------------------------------------------- 93 (385)
T ss_dssp --------------H---HHHHHHTSCGGGTSCTT---------------------------------------------
T ss_pred --------------H---HHHHHHhCCHHHhCCCC---------------------------------------------
Confidence 2 99999999999864321
Q ss_pred cccccchhccccchhhhhhhhhhhcccccccccCCCCCCCCcceEEEEE-EEEecCcccChHHHHHHHHHHHHhhcC---
Q psy19 175 PQVNNVQIEKGDLQNQELKEIDINSMCSSQNQKTNFTNPEENLLKFRVT-CNRVGKHTVTSMESERAFGGKLNDTYF--- 250 (494)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tFrV~-~~~~g~~~~~s~~~~~~v~~aI~d~~~--- 250 (494)
.||+|+ +++.+++.|++.+++.++|+||+|+++
T Consensus 94 -------------------------------------------~tf~V~~~~~~~s~~~~~~~~~~~vkdAIvd~~~~~~ 130 (385)
T 3ldu_A 94 -------------------------------------------AQFPISKASSIKSKLYSTPDVQAIVKKAIVESLKKSY 130 (385)
T ss_dssp -------------------------------------------CBCCEEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------------------ceEEEEeecccCCCcCcHHHHHHHHHHHHHHHHHHhh
Confidence 279999 888888999999999999999999873
Q ss_pred -C--CCCCCCCCEEEEEEEecCcceeccccccccccccccc-ccccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHH
Q psy19 251 -W--LVDLDDYDIDINLQIRYNEAYVGLPVTQTSLHRRNIV-EFNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIP 326 (494)
Q Consensus 251 -~--~vdl~~pdi~i~v~l~~~~~~l~l~lsg~sL~~Rgy~-~~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtil 326 (494)
. .||+++|++.|.+++.++.+++++|++|++||+|||+ ..++|||+|++|++|+.+++|.++.+|||||||||||+
T Consensus 131 ~~rp~v~~~~p~~~i~~~i~~~~~~~~lD~sG~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~l 210 (385)
T 3ldu_A 131 LEDGLLKEDKEKYPIFVFIHKDKVTISIDTTGDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTIL 210 (385)
T ss_dssp TCCSCCCCCSCBCCEEEEEETTEEEEEEESCCSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHH
T ss_pred CCCCCCCCCCCCEEEEEEEECCEEEEEEecCCChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHH
Confidence 2 6899999999999999999999999999999999997 56899999999999999999999999999999999999
Q ss_pred HHHHhcCCC--------------------------------------CeEEEEeCCHHHHHHHHHHHHhccCCCCcccce
Q psy19 327 VECSLSYPH--------------------------------------TFFVCGDINEKLVLKTQANVLHNSGNLNRELKV 368 (494)
Q Consensus 327 IEAA~~~~~--------------------------------------~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i 368 (494)
||||++..+ ..|+|+|+|+.|++.|++|+..+|+ .+.+
T Consensus 211 ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl----~~~i 286 (385)
T 3ldu_A 211 IEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGV----DEYI 286 (385)
T ss_dssp HHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTC----GGGE
T ss_pred HHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCC----CCce
Confidence 999987321 4699999999999999999998875 4568
Q ss_pred eeeeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhccc--CCCcEEEEEecCHHHHHHHHHhcccc
Q psy19 369 SPLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVR--PQIGRAILLTSDRKHLIQALHITSAL 446 (494)
Q Consensus 369 ~~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLk--pg~G~lvllt~~~~~l~~~l~~~~~l 446 (494)
++.++|+.+++.+ ..||+||+|||||.+++...++..+|+. ++++|+ +| |+++++|++.. +.+.++
T Consensus 287 ~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~----lg~~lk~~~g-~~~~iit~~~~-l~~~~g----- 354 (385)
T 3ldu_A 287 EFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKE----LGYAFRKLKN-WSYYLITSYED-FEYEFG----- 354 (385)
T ss_dssp EEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHH----HHHHHHTSBS-CEEEEEESCTT-HHHHHT-----
T ss_pred EEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHH----HHHHHhhCCC-CEEEEEECCHH-HHHhhC-----
Confidence 9999999998654 5899999999999998876677788885 555555 47 99999999987 556555
Q ss_pred ceeeeeEEEccCCceEEEEEEe
Q psy19 447 WKCRKQIKINMSGMKSFVFILN 468 (494)
Q Consensus 447 ~~~~~~~~v~~Ggl~~~i~v~~ 468 (494)
.+..+++.++||+++|++|.|.
T Consensus 355 ~~~~~~~~l~nG~l~~~~~~~~ 376 (385)
T 3ldu_A 355 QKADKKRKLYNGMLKTNFFQYP 376 (385)
T ss_dssp SCCSEEEEEEETTEEEEEEEEC
T ss_pred CCcccceEEecCCEEEEEEEEE
Confidence 4778899999999999999886
No 4
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=100.00 E-value=8.4e-58 Score=509.74 Aligned_cols=328 Identities=20% Similarity=0.249 Sum_probs=284.5
Q ss_pred EEEEEEcCCChHHHHHHHHHHHhCCccceEEEcCeEEEEeChhhHHHHh-hhhhhhhhhhhhhcccccCCCCCCCccCCC
Q psy19 17 ITIEATVVTGFEDVVVEECQEKFGKDLLLMKSIGRVFFNIDLKDIEKVK-ELRGIDNILFIIATFENFGFSNKGTEEDSG 95 (494)
Q Consensus 17 ~~~~~t~~~GlE~~~~~E~~~kl~~~~~~~~~~G~V~F~~~~~~~~~~~-~lR~a~rl~~~l~~~~~~~~~~~~~~~~~~ 95 (494)
++|||||++|||.+|++||++ ||.. .+...+|+|+|+++++++|++| |||+|+||++++++|++.+++
T Consensus 3 ~~~~a~~~~GlE~~l~~El~~-lg~~-~~~~~~g~V~f~g~~~~~~~~~l~~R~a~Rvl~~l~~f~~~~~~--------- 71 (703)
T 3v97_A 3 NSLFASTARGLEELLKTELEN-LGAV-ECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDL--------- 71 (703)
T ss_dssp EEEEEECCTTCHHHHHHHHHH-TTCE-EEEEETTEEEEEECHHHHHHHHHHCSSCSEEEEEEEEEECSSHH---------
T ss_pred eeEEEECCCcHHHHHHHHHHh-cCCc-ccEEECCEEEEEeCHHHHHHHHHhhCceeEEEEEEEEEecCCHH---------
Confidence 579999999999999999999 9975 7888999999999999999999 999999999999998665432
Q ss_pred CCcchhhHHhhhhhHHHHHHhhhccCchhhHHHhhhhhccCCCcCcchhhccchhhhhhhccccchhhcccccCccCccc
Q psy19 96 QKDESDLLKDKLKDVATIQNKVLEIDWKKYMEIWKQITNYNGVLYPSIEQFNKYNDILRHKKSIRNEINIKKESSCETEP 175 (494)
Q Consensus 96 ~~~~~~~~~~~l~~~~~l~~~~~~~~W~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (494)
+ ||+.++.+||+++|...
T Consensus 72 -------------~---L~~~~~~~~w~~~~~~~---------------------------------------------- 89 (703)
T 3v97_A 72 -------------D---LYLGVQAINWTEMFNPG---------------------------------------------- 89 (703)
T ss_dssp -------------H---HHHHHHTSCHHHHBCTT----------------------------------------------
T ss_pred -------------H---HHHHHHcCCHHHhCCCC----------------------------------------------
Confidence 3 99999999999865432
Q ss_pred ccccchhccccchhhhhhhhhhhcccccccccCCCCCCCCcceEEEEEEEEecCcccChHHHHHHHHHHHHhhc----CC
Q psy19 176 QVNNVQIEKGDLQNQELKEIDINSMCSSQNQKTNFTNPEENLLKFRVTCNRVGKHTVTSMESERAFGGKLNDTY----FW 251 (494)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tFrV~~~~~g~~~~~s~~~~~~v~~aI~d~~----~~ 251 (494)
.||+|++++.+++.+++++++.++|+||+|++ ++
T Consensus 90 ------------------------------------------~tf~V~~~~~~~~~~~~~~~~~~vk~ai~d~~~~~~g~ 127 (703)
T 3v97_A 90 ------------------------------------------ATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLP 127 (703)
T ss_dssp ------------------------------------------CCEEEEEECCCSSCCSHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------------------------------------------ceEEEEEEEecCCcCChHHHHHHHHHHHHHHHHHhhCC
Confidence 27999998888888899999999999999988 33
Q ss_pred --CCCCCCCCEEEEEEEecCcceeccccccccccccccc-ccccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHH
Q psy19 252 --LVDLDDYDIDINLQIRYNEAYVGLPVTQTSLHRRNIV-EFNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVE 328 (494)
Q Consensus 252 --~vdl~~pdi~i~v~l~~~~~~l~l~lsg~sL~~Rgy~-~~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIE 328 (494)
+||+++||++|++++.++.+++++|+||++||+|||+ ..++|||+|+||++|+.+++|.++.+|||||||||||+||
T Consensus 128 rp~v~~~~pd~~i~v~l~~~~~~l~ld~sg~~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIe 207 (703)
T 3v97_A 128 RPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIE 207 (703)
T ss_dssp CCCBCSSSCSEEEEEEEETTEEEEEEESSSSCTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHH
T ss_pred CCCCCCCCCCEEEEEEEECCEEEEEEecCCCccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHH
Confidence 5999999999999999999999999999999999997 5689999999999999999999999999999999999999
Q ss_pred HHhcC------------------------------------------CCCeEEEEeCCHHHHHHHHHHHHhccCCCCccc
Q psy19 329 CSLSY------------------------------------------PHTFFVCGDINEKLVLKTQANVLHNSGNLNREL 366 (494)
Q Consensus 329 AA~~~------------------------------------------~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~ 366 (494)
||++. +...++|+|+|+.|++.|++|+..+|+ .+
T Consensus 208 Aa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv----~~ 283 (703)
T 3v97_A 208 AAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI----GE 283 (703)
T ss_dssp HHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTC----GG
T ss_pred HHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCC----CC
Confidence 99862 114799999999999999999999876 45
Q ss_pred ceeeeeeccccccCC--CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHhcc
Q psy19 367 KVSPLVCNVRQLCFK--PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITS 444 (494)
Q Consensus 367 ~i~~~~~Da~~l~~~--~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~~~ 444 (494)
.+.+.++|+.++..+ .+.||+||+|||||.|++...++..+|+.+ .++.+.+.|| |+++++|++.. +.+.++
T Consensus 284 ~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l-~~~lk~~~~g-~~~~ilt~~~~-l~~~~g--- 357 (703)
T 3v97_A 284 LITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLL-GRIMKNQFGG-WNLSLFSASPD-LLSCLQ--- 357 (703)
T ss_dssp GEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHH-HHHHHHHCTT-CEEEEEESCHH-HHHTTC---
T ss_pred ceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHH-HHHHHhhCCC-CeEEEEeCCHH-HHHHhC---
Confidence 689999999988432 338999999999999998887888899853 3344445588 99999999987 444333
Q ss_pred ccceeeeeEEEccCCceEEEEEEeeCC
Q psy19 445 ALWKCRKQIKINMSGMKSFVFILNRTA 471 (494)
Q Consensus 445 ~l~~~~~~~~v~~Ggl~~~i~v~~~~~ 471 (494)
++..+++.++||+++|++|.|+...
T Consensus 358 --lk~~k~~~l~nG~l~~~~~~y~~~~ 382 (703)
T 3v97_A 358 --LRADKQYKAKNGPLDCVQKNYHVAE 382 (703)
T ss_dssp --CCEEEEEEEEETTEEEEEEEEECCC
T ss_pred --CCcccceeeecCCEEEEEEEEEecc
Confidence 5889999999999999999998743
No 5
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=100.00 E-value=2e-56 Score=464.62 Aligned_cols=345 Identities=23% Similarity=0.331 Sum_probs=295.2
Q ss_pred EEEEEEcCCChHHHHHHHHHHHhCCc-------cceEE-EcCeEEEEe-------------ChhhHHHHh-hhhhhhhhh
Q psy19 17 ITIEATVVTGFEDVVVEECQEKFGKD-------LLLMK-SIGRVFFNI-------------DLKDIEKVK-ELRGIDNIL 74 (494)
Q Consensus 17 ~~~~~t~~~GlE~~~~~E~~~kl~~~-------~~~~~-~~G~V~F~~-------------~~~~~~~~~-~lR~a~rl~ 74 (494)
|+|+|||++|||.+|++||++ ||.. ..+.. .+|+|+|++ +++.++++| |||+|+||+
T Consensus 1 ~~~~~~~~~GlE~~l~~El~~-lg~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~a~rv~ 79 (373)
T 3tm4_A 1 MKFLLTTAQGIEDIAKREVSL-LLKKLGISFQIEEKPLGIEGRLLLEAEKAYYVDEKGRKRELSISTYLNENSRLLHRVI 79 (373)
T ss_dssp CEEEEECCTTCHHHHHHHHHH-HHHTTTCCEEEEESGGGCTTEEEEEECCEEEECTTSCEEEECHHHHHHHHCSSCSEEE
T ss_pred CeEEEEcCcchHHHHHHHHHH-hhccccccccceeccccccceEEEEEecccccccccccCCHHHHHHHHHhhhhHhheE
Confidence 689999999999999999999 7641 13344 799999999 999999999 999999999
Q ss_pred hhhhcccccCCCCCCCccCCCCCcchhhHHhhhhhHHHHHHhhhccCchhhHHHhhhhhccCCCcCcchhhccchhhhhh
Q psy19 75 FIIATFENFGFSNKGTEEDSGQKDESDLLKDKLKDVATIQNKVLEIDWKKYMEIWKQITNYNGVLYPSIEQFNKYNDILR 154 (494)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~W~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 154 (494)
+++++|++.+.... .++. .+++ ||+.++.++|++++...
T Consensus 80 ~~~~~~~~~~~~~~-~~~~------------~~~~---L~~~v~~~~w~~~l~~~------------------------- 118 (373)
T 3tm4_A 80 IEIASEKFNGIEKD-ESEE------------ALKR---IKDFVSSLPVEQFVKVS------------------------- 118 (373)
T ss_dssp EEEEEEECTTTTTS-CHHH------------HHHH---HHHHHHTSCGGGGSCTT-------------------------
T ss_pred EEEEEeEecccccc-ccCC------------CHHH---HHHHHHhCCHHHhCCCC-------------------------
Confidence 99999865332210 0111 3444 99999999998854322
Q ss_pred hccccchhhcccccCccCcccccccchhccccchhhhhhhhhhhcccccccccCCCCCCCCcceEEEEEEEEecCcccCh
Q psy19 155 HKKSIRNEINIKKESSCETEPQVNNVQIEKGDLQNQELKEIDINSMCSSQNQKTNFTNPEENLLKFRVTCNRVGKHTVTS 234 (494)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tFrV~~~~~g~~~~~s 234 (494)
.||+|++++.+++.|+|
T Consensus 119 ---------------------------------------------------------------~tF~V~~~~~~~~~~~s 135 (373)
T 3tm4_A 119 ---------------------------------------------------------------ETFAVRSFRKGDHNITS 135 (373)
T ss_dssp ---------------------------------------------------------------SEEEEEEEEESSCSSCH
T ss_pred ---------------------------------------------------------------CcEEEEEEECCCCcCCH
Confidence 28999999999889999
Q ss_pred HHHHHHHHHHHHhhcC----CCCCCCCCCEEEEEEEecCcceeccccccc-cccccccc-ccccccchHHHHHHHHHHhC
Q psy19 235 MESERAFGGKLNDTYF----WLVDLDDYDIDINLQIRYNEAYVGLPVTQT-SLHRRNIV-EFNITTLKPTIAYNMVRLAS 308 (494)
Q Consensus 235 ~~~~~~v~~aI~d~~~----~~vdl~~pdi~i~v~l~~~~~~l~l~lsg~-sL~~Rgy~-~~~~a~L~e~lAa~ll~la~ 308 (494)
.++++++|++|+|++. ..||+++|++.|++++.++.++++++++|+ ++|+|||+ +.+++|+++++|+.|+.++
T Consensus 136 ~~~~~~vk~aIvd~~~~~g~~~v~~~~p~~~i~~~~~~d~~~~~ld~~g~~~l~~rgyr~~~~~a~l~~~la~~l~~~~- 214 (373)
T 3tm4_A 136 IDIARTVGEAIFERLSRFGTPLVNLDHPAVIFRAELIKDVFFLGIDTTGDSSLHKRPWRVYDHPAHLKASIANAMIELA- 214 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCEECSSSCSEEEEEEEETTEEEEEEESSCSSCTTCCTTCCSCCTTCCCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCCCeEEEEEEECCEEEEEEEccCCcccccCCcccccCCCCccHHHHHHHHHhh-
Confidence 9999999999998875 579999999999999999999999999997 99999997 5689999999999999999
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
|.++.+|||||||+|++++++|.+.+...++|+|+|+.+++.|++|+..+|+ ...+.+.++|+.++++++++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl----~~~i~~~~~D~~~~~~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV----LDKIKFIQGDATQLSQYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC----GGGCEEEECCGGGGGGTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC----CCceEEEECChhhCCcccCCcCEE
Confidence 9999999999999999999999986555899999999999999999998865 456799999999998776799999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHhccccceeeeeEEEccCCceEEEEEEe
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITSALWKCRKQIKINMSGMKSFVFILN 468 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~~i~v~~ 468 (494)
|+|||||.+++....+..+|..+++++.++| + |++++++++...+.+.+...| |+..+...++||+++|++|...
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~-g~~~~i~~~~~~~~~~~~~~G--~~~~~~~~~~nG~l~~~~~~~~ 365 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--E-KRGVFITTEKKAIEEAIAENG--FEIIHHRVIGHGGLMVHLYVVK 365 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--E-EEEEEEESCHHHHHHHHHHTT--EEEEEEEEEEETTEEEEEEEEE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--C-CeEEEEECCHHHHHHHHHHcC--CEEEEEEEEEcCCEEEEEEecc
Confidence 9999999999887788999999999999999 6 889999999888888888777 7889999999999999999999
Q ss_pred eCCCCCCC
Q psy19 469 RTADLFDY 476 (494)
Q Consensus 469 ~~~~~~d~ 476 (494)
+..+.+.|
T Consensus 366 ~~~~~~~~ 373 (373)
T 3tm4_A 366 LEHHHHHH 373 (373)
T ss_dssp ETTCC---
T ss_pred CccCCCCC
Confidence 88777665
No 6
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=100.00 E-value=8.6e-55 Score=448.33 Aligned_cols=332 Identities=29% Similarity=0.379 Sum_probs=287.7
Q ss_pred EEEEEEcCCChHHHHHHHHHHHhCCccceEEEc--CeEEEEeChhhHHHHhhhhhhhhhhhhhhcccccCCCCCCCccCC
Q psy19 17 ITIEATVVTGFEDVVVEECQEKFGKDLLLMKSI--GRVFFNIDLKDIEKVKELRGIDNILFIIATFENFGFSNKGTEEDS 94 (494)
Q Consensus 17 ~~~~~t~~~GlE~~~~~E~~~kl~~~~~~~~~~--G~V~F~~~~~~~~~~~~lR~a~rl~~~l~~~~~~~~~~~~~~~~~ 94 (494)
|+|+|||++|||.+|++||+++||.. .+.... |+|+|.++.+ ...+.+||+|+||++++++|... ..+
T Consensus 20 ~~~~~~~~~GlE~~l~~El~~~lg~~-~~~~~~~~g~v~~~~~~~-~~~~~~lR~a~rvl~~~~~~~~~-~~~------- 89 (354)
T 3tma_A 20 MWLEATTHPGLEDLLLEELSALYPGE-GAEVDARKGRVRIPRAWV-GEEALGLRLAHHLVLFRARLLLS-RED------- 89 (354)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHSCSS-CCEEETTTTEEEEECSCC-CGGGGGCSSCSCEEEEEEEEECC-SSS-------
T ss_pred eEEEEECCccHHHHHHHHHHHHcCCc-cceeeecCCEEEEEecCC-HHHHHhcCCccEEEEEeeeccCC-chh-------
Confidence 88999999999999999999989865 565544 9999887542 33345899999999999987321 100
Q ss_pred CCCcchhhHHhhhhhHHHHHHhhhccCchhhHHHhhhhhccCCCcCcchhhccchhhhhhhccccchhhcccccCccCcc
Q psy19 95 GQKDESDLLKDKLKDVATIQNKVLEIDWKKYMEIWKQITNYNGVLYPSIEQFNKYNDILRHKKSIRNEINIKKESSCETE 174 (494)
Q Consensus 95 ~~~~~~~~~~~~l~~~~~l~~~~~~~~W~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (494)
++++ ||+.++.++|+++ ...
T Consensus 90 -----------~~~~---L~~~~~~~~w~~~-~~~--------------------------------------------- 109 (354)
T 3tma_A 90 -----------PLGA---LERAALALPWPEL-EGA--------------------------------------------- 109 (354)
T ss_dssp -----------HHHH---HHHHHHTSCCTTH-HHH---------------------------------------------
T ss_pred -----------hHHH---HHHHHHhCchhhc-CCC---------------------------------------------
Confidence 1444 9999999999985 111
Q ss_pred cccccchhccccchhhhhhhhhhhcccccccccCCCCCCCCcceEEEEEEEEecCcccChHHHHHHHHHHHHhhcCCCCC
Q psy19 175 PQVNNVQIEKGDLQNQELKEIDINSMCSSQNQKTNFTNPEENLLKFRVTCNRVGKHTVTSMESERAFGGKLNDTYFWLVD 254 (494)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tFrV~~~~~g~~~~~s~~~~~~v~~aI~d~~~~~vd 254 (494)
.||+|++++.+++.|++.++++.+++.+.+.++++||
T Consensus 110 -------------------------------------------~tF~V~~~~~~~~~f~s~~vk~~i~~~l~~~~g~~v~ 146 (354)
T 3tma_A 110 -------------------------------------------GSFRVEARREGEHPFTSPEVERRVGEALHRAYGVPVD 146 (354)
T ss_dssp -------------------------------------------CCEEEEEEEESCCSSCHHHHHHHHHHHHHHHHCCCBC
T ss_pred -------------------------------------------CCEEEEEEEcCCCCCCHHHHHHHHHHHHHHhhCCccc
Confidence 2799999999988899999999999999998888999
Q ss_pred CCCCCEEEEEEEecCcceecccccccccccccccccccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-
Q psy19 255 LDDYDIDINLQIRYNEAYVGLPVTQTSLHRRNIVEFNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY- 333 (494)
Q Consensus 255 l~~pdi~i~v~l~~~~~~l~l~lsg~sL~~Rgy~~~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~- 333 (494)
+++||++|++++.++.++++++++|++||+|+|+..+++|+++++|++|+.+++|+++.+|||||||+|++++++|.++
T Consensus 147 ~~~pd~~i~v~i~~d~~~l~~d~sg~~l~~r~yr~~~~a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~ 226 (354)
T 3tma_A 147 LKRPAVRVRVDVRGEEAFLGVQLTERPLSRRFPKAALRGSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLG 226 (354)
T ss_dssp SSSCSEEEEEEEETTEEEEEEECCSSCGGGCCGGGCSSCSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHC
T ss_pred CCCCCEEEEEEEECCEEEEEEEccCCcccccccccCCCCCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhC
Confidence 9999999999999999999999999999999997688999999999999999999999999999999999999999986
Q ss_pred CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHH
Q psy19 334 PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLI 413 (494)
Q Consensus 334 ~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~ 413 (494)
+...++|+|+|+.+++.|++|+..+|+ . .+.+.++|+.+++.+...||+||+|||||.+++.......+|..+++
T Consensus 227 ~~~~v~g~Di~~~~i~~a~~n~~~~g~----~-~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~ 301 (354)
T 3tma_A 227 PTSPVYAGDLDEKRLGLAREAALASGL----S-WIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLR 301 (354)
T ss_dssp TTSCEEEEESCHHHHHHHHHHHHHTTC----T-TCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHH
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCC----C-ceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHH
Confidence 678999999999999999999998875 2 57899999999876666799999999999999877778899999999
Q ss_pred HHhhcccCCCcEEEEEecCHHHHHHHHHhccccceeeeeEEEccCCceEEEEEEeeC
Q psy19 414 EIGKIVRPQIGRAILLTSDRKHLIQALHITSALWKCRKQIKINMSGMKSFVFILNRT 470 (494)
Q Consensus 414 ~l~rvLkpg~G~lvllt~~~~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~~i~v~~~~ 470 (494)
.+.++|+|| |++++++++...+..... .+ |+..++..+++|++.+++|++++.
T Consensus 302 ~~~~~Lkpg-G~l~i~t~~~~~~~~~~~-~g--~~~~~~~~l~~g~l~~~i~vl~rl 354 (354)
T 3tma_A 302 GALALLPPG-GRVALLTLRPALLKRALP-PG--FALRHARVVEQGGVYPRVFVLEKL 354 (354)
T ss_dssp HHHHTSCTT-CEEEEEESCHHHHHHHCC-TT--EEEEEEEECCBTTBCCEEEEEEEC
T ss_pred HHHHhcCCC-cEEEEEeCCHHHHHHHhh-cC--cEEEEEEEEEeCCEEEEEEEEEcC
Confidence 999999999 999999999876655444 44 688899999999999999999873
No 7
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.74 E-value=6.1e-17 Score=154.74 Aligned_cols=160 Identities=14% Similarity=0.103 Sum_probs=117.4
Q ss_pred hCCCCCCEEEEEcCC-cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-cCCCCC
Q psy19 307 ASPIPGDVFLDPMCG-GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-CFKPAC 384 (494)
Q Consensus 307 a~~~~g~~VLDP~CG-SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~~~~~~ 384 (494)
...+++.+|||+||| +|.+++.++..+ +..++|+|+++.+++.|++|+..+++ ++.++++|+..+ ++++++
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~~~~~~ 123 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS------NVRLVKSNGGIIKGVVEGT 123 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC------CCEEEECSSCSSTTTCCSC
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC------CcEEEeCCchhhhhcccCc
Confidence 345688999999999 999999998875 57999999999999999999998764 468899997544 344578
Q ss_pred eeEEEEcCCCccccC-----------CccchHHHHHHHHHHHhhcccCCCcEEEEEecCH----HHHHHHHHhcccccee
Q psy19 385 VDGIVTDLPFGKRVG-----------SKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR----KHLIQALHITSALWKC 449 (494)
Q Consensus 385 ~D~IVtNPPYG~r~~-----------~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~----~~l~~~l~~~~~l~~~ 449 (494)
||+|++||||..... .......++..+++++.++|+|| |+++++++.. ..+.+.+.+.+ + .
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~~~l~~~g--~-~ 199 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALYLPDKEKLLNVIKERGIKLG--Y-S 199 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEEEESCHHHHHHHHHHHHHTT--C-E
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEEecccHhHHHHHHHHHHHcC--C-c
Confidence 999999999964221 00112345688999999999999 9999977642 23455556555 3 3
Q ss_pred eeeEEEccCCceEEEEEEeeCCCCCCCc
Q psy19 450 RKQIKINMSGMKSFVFILNRTADLFDYA 477 (494)
Q Consensus 450 ~~~~~v~~Ggl~~~i~v~~~~~~~~d~~ 477 (494)
...+.+..|....+++.|.+...+++|-
T Consensus 200 ~~~~~~~~g~~~~~~l~f~~~~~~~~~~ 227 (230)
T 3evz_A 200 VKDIKFKVGTRWRHSLIFFKGISEGHHH 227 (230)
T ss_dssp EEEEEECCCC-CEEEEEEECCC------
T ss_pred eEEEEecCCCeEEEEEEEeccccccccc
Confidence 4566778888889999999988888874
No 8
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.70 E-value=6.4e-16 Score=151.38 Aligned_cols=147 Identities=12% Similarity=0.139 Sum_probs=107.7
Q ss_pred HHHHHHhCCC-CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc
Q psy19 301 YNMVRLASPI-PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC 379 (494)
Q Consensus 301 a~ll~la~~~-~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~ 379 (494)
..+..++... ++.+|||+|||+|.+++.+|...+. .++|+|+++.+++.|++|+..+++ .+++.++++|+.+++
T Consensus 38 ~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~----~~~v~~~~~D~~~~~ 112 (259)
T 3lpm_A 38 VLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQL----EDQIEIIEYDLKKIT 112 (259)
T ss_dssp HHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTC----TTTEEEECSCGGGGG
T ss_pred HHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCC----cccEEEEECcHHHhh
Confidence 3345566777 8899999999999999999988553 999999999999999999998765 456899999999875
Q ss_pred --CCCCCeeEEEEcCCCccccCC----c--------cchHHHHHHHHHHHhhcccCCCcEEEEEecCH--HHHHHHHHhc
Q psy19 380 --FKPACVDGIVTDLPFGKRVGS----K--------SNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR--KHLIQALHIT 443 (494)
Q Consensus 380 --~~~~~~D~IVtNPPYG~r~~~----~--------~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~--~~l~~~l~~~ 443 (494)
++.++||+|++||||....+. . ......+..+++.+.++|+|| |+++++.+.. ..+...+...
T Consensus 113 ~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~l~~~ 191 (259)
T 3lpm_A 113 DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG-GKANFVHRPERLLDIIDIMRKY 191 (259)
T ss_dssp GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE-EEEEEEECTTTHHHHHHHHHHT
T ss_pred hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC-cEEEEEEcHHHHHHHHHHHHHC
Confidence 445799999999999543110 0 011234667899999999999 9999987643 3344455554
Q ss_pred cccceeeeeEEE
Q psy19 444 SALWKCRKQIKI 455 (494)
Q Consensus 444 ~~l~~~~~~~~v 455 (494)
+ +...+...+
T Consensus 192 ~--~~~~~~~~v 201 (259)
T 3lpm_A 192 R--LEPKRIQFV 201 (259)
T ss_dssp T--EEEEEEEEE
T ss_pred C--CceEEEEEe
Confidence 4 444444444
No 9
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.69 E-value=6.5e-17 Score=151.44 Aligned_cols=160 Identities=12% Similarity=0.065 Sum_probs=102.3
Q ss_pred cccccchHHHHHHHHHHhCC-CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccce
Q psy19 290 FNITTLKPTIAYNMVRLASP-IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKV 368 (494)
Q Consensus 290 ~~~a~L~e~lAa~ll~la~~-~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i 368 (494)
+.|.+..+.++..++..... .++.+|||+|||+|.+++.++..+++..++|+|+++.+++.|++|+..++. ++
T Consensus 8 ~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~ 81 (215)
T 4dzr_A 8 LIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA------VV 81 (215)
T ss_dssp GSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------
T ss_pred cCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC------ce
Confidence 45677778888888887765 678899999999999999999998888999999999999999999987653 46
Q ss_pred eeeeeccccccCCC-----CCeeEEEEcCCCccccCC------------------ccchHHHHHHHHHHHhhcccCCCcE
Q psy19 369 SPLVCNVRQLCFKP-----ACVDGIVTDLPFGKRVGS------------------KSNNFLLYRLFLIEIGKIVRPQIGR 425 (494)
Q Consensus 369 ~~~~~Da~~l~~~~-----~~~D~IVtNPPYG~r~~~------------------~~~~~~ly~~fL~~l~rvLkpg~G~ 425 (494)
.++++|+.+ ++.+ ++||+|++||||...... ..+....|..+++++.++|+|| |+
T Consensus 82 ~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~ 159 (215)
T 4dzr_A 82 DWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARG-RA 159 (215)
T ss_dssp -CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSS-SE
T ss_pred EEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCC-Ce
Confidence 788999887 4443 789999999999542211 0112345688999999999999 99
Q ss_pred -EEEEec--CHHHHHHHHH--hccccceeeeeEEEccCC
Q psy19 426 -AILLTS--DRKHLIQALH--ITSALWKCRKQIKINMSG 459 (494)
Q Consensus 426 -lvllt~--~~~~l~~~l~--~~~~l~~~~~~~~v~~Gg 459 (494)
+++.++ ....+...+. ..+ |..........|.
T Consensus 160 l~~~~~~~~~~~~~~~~l~~~~~g--f~~~~~~~~~~~~ 196 (215)
T 4dzr_A 160 GVFLEVGHNQADEVARLFAPWRER--GFRVRKVKDLRGI 196 (215)
T ss_dssp EEEEECTTSCHHHHHHHTGGGGGG--TEECCEEECTTSC
T ss_pred EEEEEECCccHHHHHHHHHHhhcC--CceEEEEEecCCC
Confidence 555544 2344555565 444 4444444444443
No 10
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=3.9e-16 Score=153.60 Aligned_cols=149 Identities=8% Similarity=0.079 Sum_probs=106.3
Q ss_pred HHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHh---ccCCCCcccceeeeeeccccc
Q psy19 302 NMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLH---NSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 302 ~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~---~g~~~~~~~~i~~~~~Da~~l 378 (494)
.|..++...++.+|||+|||+|.+++.++...++..++|+|+++.+++.|++|+.. +++ .+++.++++|+.++
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l----~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF----SARIEVLEADVTLR 102 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT----GGGEEEEECCTTCC
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC----cceEEEEeCCHHHH
Confidence 34455666778899999999999999999998888999999999999999999987 543 45689999999886
Q ss_pred -------cCCCCCeeEEEEcCCCccccCCc--c--------chHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHH
Q psy19 379 -------CFKPACVDGIVTDLPFGKRVGSK--S--------NNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALH 441 (494)
Q Consensus 379 -------~~~~~~~D~IVtNPPYG~r~~~~--~--------~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~ 441 (494)
++++++||+|++||||....+.. . .....+..+++.+.++|+|| |+++++.+... +.+.+.
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~-~~~~~~ 180 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSG-GQLSLISRPQS-VAEIIA 180 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEE-EEEEEEECGGG-HHHHHH
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCC-CEEEEEEcHHH-HHHHHH
Confidence 24457899999999997541100 0 00112567888999999999 99999887643 333333
Q ss_pred hccccceeeeeEEEc
Q psy19 442 ITSALWKCRKQIKIN 456 (494)
Q Consensus 442 ~~~~l~~~~~~~~v~ 456 (494)
.....+...+...+.
T Consensus 181 ~l~~~~~~~~i~~v~ 195 (260)
T 2ozv_A 181 ACGSRFGGLEITLIH 195 (260)
T ss_dssp HHTTTEEEEEEEEEE
T ss_pred HHHhcCCceEEEEEc
Confidence 222123444444444
No 11
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.67 E-value=2.3e-15 Score=148.80 Aligned_cols=161 Identities=12% Similarity=0.036 Sum_probs=122.1
Q ss_pred ccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceee
Q psy19 291 NITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSP 370 (494)
Q Consensus 291 ~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~ 370 (494)
.|.|..+.+...++.... .++.+|||+|||+|.+++.++..+++..++|+|+++.+++.|++|+..+++ .++.+
T Consensus 90 ipr~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~-----~~v~~ 163 (276)
T 2b3t_A 90 IPRPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI-----KNIHI 163 (276)
T ss_dssp CCCTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEE
T ss_pred ccCchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEE
Confidence 466778888888888766 567899999999999999999888888999999999999999999998764 24789
Q ss_pred eeeccccccCCCCCeeEEEEcCCCccccC-----------C------ccchHHHHHHHHHHHhhcccCCCcEEEEEecC-
Q psy19 371 LVCNVRQLCFKPACVDGIVTDLPFGKRVG-----------S------KSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD- 432 (494)
Q Consensus 371 ~~~Da~~l~~~~~~~D~IVtNPPYG~r~~-----------~------~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~- 432 (494)
.++|+... ++.++||+|++||||..... . ..+....|..++..+.++|+|| |.+++..+.
T Consensus 164 ~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~ 241 (276)
T 2b3t_A 164 LQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSG-GFLLLEHGWQ 241 (276)
T ss_dssp ECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCSS
T ss_pred EEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCC-CEEEEEECch
Confidence 99999874 33468999999999964311 0 0111256889999999999999 999887653
Q ss_pred -HHHHHHHHHhccccceeeeeEEEccCCceE
Q psy19 433 -RKHLIQALHITSALWKCRKQIKINMSGMKS 462 (494)
Q Consensus 433 -~~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~ 462 (494)
...+.+.+...| |....... ...|..+
T Consensus 242 ~~~~~~~~l~~~G--f~~v~~~~-d~~g~~r 269 (276)
T 2b3t_A 242 QGEAVRQAFILAG--YHDVETCR-DYGDNER 269 (276)
T ss_dssp CHHHHHHHHHHTT--CTTCCEEE-CTTSSEE
T ss_pred HHHHHHHHHHHCC--CcEEEEEe-cCCCCCc
Confidence 345667777665 34444333 3344443
No 12
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.65 E-value=3.5e-15 Score=139.10 Aligned_cols=165 Identities=12% Similarity=0.076 Sum_probs=114.9
Q ss_pred hCCCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-CCCCC
Q psy19 307 ASPIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-FKPAC 384 (494)
Q Consensus 307 a~~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~~~~~ 384 (494)
...+++.+|||+|||+|.+++.++... +...++|+|+++.+++.|++|+..+++ ..++.++++|+..++ +.+++
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~ 93 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL----IDRVTLIKDGHQNMDKYIDCP 93 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC----GGGEEEECSCGGGGGGTCCSC
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCeEEEECCHHHHhhhccCC
Confidence 345688999999999999999988874 457999999999999999999998754 456889999998875 44578
Q ss_pred eeEEEEcCCCcccc-CCccchHHHHHHHHHHHhhcccCCCcEEEEEecC--------HHHHHHHHHhcc-ccceeeeeEE
Q psy19 385 VDGIVTDLPFGKRV-GSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD--------RKHLIQALHITS-ALWKCRKQIK 454 (494)
Q Consensus 385 ~D~IVtNPPYG~r~-~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~--------~~~l~~~l~~~~-~l~~~~~~~~ 454 (494)
||+|++||||-... .........+..+++++.++|+|| |+++++... ...+.+.+.... ..|.......
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~ 172 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDF 172 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEE
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEe
Confidence 99999999982111 001112334556888999999999 999887531 122333333222 1133333333
Q ss_pred EccCCceEEEEEEeeCCCCCCC
Q psy19 455 INMSGMKSFVFILNRTADLFDY 476 (494)
Q Consensus 455 v~~Ggl~~~i~v~~~~~~~~d~ 476 (494)
+...+....+++.+....++.|
T Consensus 173 ~~~~~~pp~~~~~~~~~~~~~~ 194 (197)
T 3eey_A 173 INQANCPPILVCIEKISEGHHH 194 (197)
T ss_dssp TTCCSCCCEEEEEEECCSSCCC
T ss_pred ccCccCCCeEEEEEEccccccc
Confidence 3333556677777777766655
No 13
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.64 E-value=6.2e-16 Score=167.70 Aligned_cols=168 Identities=13% Similarity=0.140 Sum_probs=118.1
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC---------------CCeEEEEeCCHHHHHHHHHHHHhcc
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP---------------HTFFVCGDINEKLVLKTQANVLHNS 359 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~---------------~~~v~G~Did~~al~~Ar~Nl~~~g 359 (494)
++..++..|+.++.+.++ +||||+||||+|+++++.... ...++|+|+++.++.+|+.|+..+|
T Consensus 229 TP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 229 TPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 456677888888888776 999999999999999875421 3579999999999999999999887
Q ss_pred CCCCcccceeeeeecccccc-CCCCCeeEEEEcCCCcccc-CC---------------------ccchHHHHHHHHHHHh
Q psy19 360 GNLNRELKVSPLVCNVRQLC-FKPACVDGIVTDLPFGKRV-GS---------------------KSNNFLLYRLFLIEIG 416 (494)
Q Consensus 360 ~~~~~~~~i~~~~~Da~~l~-~~~~~~D~IVtNPPYG~r~-~~---------------------~~~~~~ly~~fL~~l~ 416 (494)
+. ..+.+.++|+...+ +....||+||+||||+.+. .. ......-| .|+..+.
T Consensus 308 i~----~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~-~Fl~~~l 382 (544)
T 3khk_A 308 ID----FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANF-AWMLHML 382 (544)
T ss_dssp CC----CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHH-HHHHHHH
T ss_pred CC----cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhH-HHHHHHH
Confidence 63 23456889987764 3456899999999998641 11 00000112 5888999
Q ss_pred hcccCCCcEEEEEecCHHH---------HHHHHHhccccceeeeeEE-----EccCCceEEEEEEeeCCC
Q psy19 417 KIVRPQIGRAILLTSDRKH---------LIQALHITSALWKCRKQIK-----INMSGMKSFVFILNRTAD 472 (494)
Q Consensus 417 rvLkpg~G~lvllt~~~~~---------l~~~l~~~~~l~~~~~~~~-----v~~Ggl~~~i~v~~~~~~ 472 (494)
+.|+|| |++++|+|+..+ +++.+-+.+. ....+. +.+-+..+.|+++.+...
T Consensus 383 ~~Lk~g-Gr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~---l~aII~LP~~lF~~t~i~t~Ilvl~K~k~ 448 (544)
T 3khk_A 383 YHLAPT-GSMALLLANGSMSSNTNNEGEIRKTLVEQDL---VECMVALPGQLFTNTQIPACIWFLTKDKN 448 (544)
T ss_dssp HTEEEE-EEEEEEEETHHHHCCGGGHHHHHHHHHHTTC---EEEEEECCTTBCCSCSSCEEEEEEESCCS
T ss_pred HHhccC-ceEEEEecchhhhcCcchHHHHHHHHHhCCc---HhEEEECCCCCCCCCCCCeEEEEEecCCC
Confidence 999999 999999986532 2222222221 111121 235577888888887654
No 14
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.64 E-value=6.3e-16 Score=150.33 Aligned_cols=130 Identities=14% Similarity=0.103 Sum_probs=97.6
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHHHHhc---cCCCCcccc-----
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS--YPHTFFVCGDINEKLVLKTQANVLHN---SGNLNRELK----- 367 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~--~~~~~v~G~Did~~al~~Ar~Nl~~~---g~~~~~~~~----- 367 (494)
.+...++......++.+|||+|||||+++++++.. +++..|+|+|+++.+++.|+.|+..+ ++ ...
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~----~~~~~~~~ 113 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL----TARELERR 113 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH----HHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc----cccchhhh
Confidence 44444444433346679999999999999999887 66679999999999999999999865 32 111
Q ss_pred --------------------ee-------------eeeeccccccC-----CCCCeeEEEEcCCCccccCCc-cchHHHH
Q psy19 368 --------------------VS-------------PLVCNVRQLCF-----KPACVDGIVTDLPFGKRVGSK-SNNFLLY 408 (494)
Q Consensus 368 --------------------i~-------------~~~~Da~~l~~-----~~~~~D~IVtNPPYG~r~~~~-~~~~~ly 408 (494)
+. +.++|+.+... ...+||+|++||||+...... ......+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~ 193 (250)
T 1o9g_A 114 EQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPV 193 (250)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHH
T ss_pred hhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHH
Confidence 55 88999887531 334899999999998543211 1235678
Q ss_pred HHHHHHHhhcccCCCcEEEEEecC
Q psy19 409 RLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 409 ~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
..+++++.++|+|| |+++++...
T Consensus 194 ~~~l~~~~~~Lkpg-G~l~~~~~~ 216 (250)
T 1o9g_A 194 AGLLRSLASALPAH-AVIAVTDRS 216 (250)
T ss_dssp HHHHHHHHHHSCTT-CEEEEEESS
T ss_pred HHHHHHHHHhcCCC-cEEEEeCcc
Confidence 89999999999999 999985444
No 15
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.64 E-value=4.9e-16 Score=164.52 Aligned_cols=172 Identities=17% Similarity=0.168 Sum_probs=120.7
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-------------CCCeEEEEeCCHHHHHHHHHHHHhccCC
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY-------------PHTFFVCGDINEKLVLKTQANVLHNSGN 361 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~-------------~~~~v~G~Did~~al~~Ar~Nl~~~g~~ 361 (494)
.+..++..|+.++.+.++.+||||+||||+++++++... +...++|+|+++.+++.|+.|+...|+.
T Consensus 155 TP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 155 TPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 345578888888888889999999999999999988642 2367999999999999999999987752
Q ss_pred CCcccceeeeeeccccccCCCCCeeEEEEcCCCccccCCccc---------hHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 362 LNRELKVSPLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSN---------NFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 362 ~~~~~~i~~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~---------~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
. ..+.+.++|+...+.. ..||+||+||||+........ .......|+..+.++|+|| |++++++|+
T Consensus 235 ~---~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~g-G~~a~V~p~ 309 (445)
T 2okc_A 235 T---DRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTG-GRAAVVLPD 309 (445)
T ss_dssp S---SCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEE-EEEEEEEEH
T ss_pred c---CCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccC-CEEEEEECC
Confidence 1 1457899999887543 489999999999864322110 0011346888999999999 999999875
Q ss_pred HHH--------HHHHHHhccccceeeeeE---EEccCCceEEEEEEeeCCC
Q psy19 433 RKH--------LIQALHITSALWKCRKQI---KINMSGMKSFVFILNRTAD 472 (494)
Q Consensus 433 ~~~--------l~~~l~~~~~l~~~~~~~---~v~~Ggl~~~i~v~~~~~~ 472 (494)
..+ +++.+-+... +...-.+ .+++-+..+.|+++.+...
T Consensus 310 ~~L~~~~~~~~iR~~L~~~~~-l~~ii~lp~~~F~~t~v~t~Il~~~k~~~ 359 (445)
T 2okc_A 310 NVLFEAGAGETIRKRLLQDFN-LHTILRLPTGIFYAQGVKANVLFFSKGQP 359 (445)
T ss_dssp HHHHCSTHHHHHHHHHHHHEE-EEEEEECCSSSSSSTTCCEEEEEEEESSC
T ss_pred cccccCcHHHHHHHHHHhcCc-EEEEEeCCCCCccCCCCCEEEEEEECCCC
Confidence 422 2222221111 1111111 1233478889988887653
No 16
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.63 E-value=1.2e-15 Score=156.04 Aligned_cols=175 Identities=14% Similarity=0.176 Sum_probs=115.6
Q ss_pred ccccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCC-----CeEEEEeCCHHHHHHHHHHHHhccCCCC
Q psy19 289 EFNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPH-----TFFVCGDINEKLVLKTQANVLHNSGNLN 363 (494)
Q Consensus 289 ~~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~-----~~v~G~Did~~al~~Ar~Nl~~~g~~~~ 363 (494)
+++|.++...++..+-.+....++.+|||||||||++++.++...+. ..++|+|+++.+++.|+.|+...|+
T Consensus 108 ~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--- 184 (344)
T 2f8l_A 108 QMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--- 184 (344)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC---
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC---
Confidence 34565444444443333335567789999999999999999876543 6899999999999999999997764
Q ss_pred cccceeeeeeccccccCCCCCeeEEEEcCCCccccCC----------ccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 364 RELKVSPLVCNVRQLCFKPACVDGIVTDLPFGKRVGS----------KSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 364 ~~~~i~~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~----------~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
.+.+.++|+.... ....||+||+|||||..... .......+..|+..+.+.|+|| |++++++++.
T Consensus 185 ---~~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~g-G~~~~v~p~~ 259 (344)
T 2f8l_A 185 ---KMTLLHQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPG-GYLFFLVPDA 259 (344)
T ss_dssp ---CCEEEESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEE-EEEEEEEEGG
T ss_pred ---CceEEECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCC-CEEEEEECch
Confidence 2578999987643 34689999999999752110 0011123456888999999999 9999998532
Q ss_pred -------HHHHHHHHhccccceeeeeE---EEccCCceEEEEEEeeCCC
Q psy19 434 -------KHLIQALHITSALWKCRKQI---KINMSGMKSFVFILNRTAD 472 (494)
Q Consensus 434 -------~~l~~~l~~~~~l~~~~~~~---~v~~Ggl~~~i~v~~~~~~ 472 (494)
..+.+.+.+.+.. ...-.+ .+.+-+....|+++.+...
T Consensus 260 ~~~~~~~~~ir~~l~~~~~~-~~ii~lp~~~F~~~~~~~~i~vl~k~~~ 307 (344)
T 2f8l_A 260 MFGTSDFAKVDKFIKKNGHI-EGIIKLPETLFKSEQARKSILILEKADV 307 (344)
T ss_dssp GGGSTTHHHHHHHHHHHEEE-EEEEECCGGGSCC-CCCEEEEEEEECCT
T ss_pred hcCCchHHHHHHHHHhCCeE-EEeeeCChhhccCCCCceEEEEEECCCC
Confidence 2344444443311 100011 1223456677777876543
No 17
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.63 E-value=2.9e-15 Score=155.82 Aligned_cols=150 Identities=13% Similarity=0.065 Sum_probs=110.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCccc-ceeeeeeccccc-c-C--CCCC
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNREL-KVSPLVCNVRQL-C-F--KPAC 384 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~-~i~~~~~Da~~l-~-~--~~~~ 384 (494)
.++.+|||+|||+|++++.+|... ...|+|+|+++.|++.|++|++.+++ .. ++.++++|+.+. + + ...+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~----~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHL----DMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTC----CCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC----CccceEEEECCHHHHHHHHHHhCCC
Confidence 578899999999999999999862 24899999999999999999998875 22 578999999874 2 1 2358
Q ss_pred eeEEEEcCCC-ccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH----HHHHHHHHhccccceeeeeEEEccCC
Q psy19 385 VDGIVTDLPF-GKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR----KHLIQALHITSALWKCRKQIKINMSG 459 (494)
Q Consensus 385 ~D~IVtNPPY-G~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~----~~l~~~l~~~~~l~~~~~~~~v~~Gg 459 (494)
||+||+|||| +...+...+....|..++..+.++|+|| |.+++.++.. ..+.+.+.... ...|
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pg-G~l~~~~~~~~~~~~~~~~~i~~~~-----------~~~g 353 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNAANMTVSQFKKQIEKGF-----------GKQK 353 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECCTTSCHHHHHHHHHHHH-----------TTCC
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCCCcCCHHHHHHHHHHHH-----------HHcC
Confidence 9999999998 3322333456677888999999999999 9988877643 33333333211 1112
Q ss_pred ceEEEEEEeeCCCCCCCcccC
Q psy19 460 MKSFVFILNRTADLFDYAIHG 480 (494)
Q Consensus 460 l~~~i~v~~~~~~~~d~~~~~ 480 (494)
.. ++++..+++|||...
T Consensus 354 ~~----~~~~~~~~~D~p~~~ 370 (385)
T 2b78_A 354 HT----YLDLQQLPSDFAVNV 370 (385)
T ss_dssp CE----EEEEECCCTTSCCCT
T ss_pred Cc----EEEeCCCCCCCCCCC
Confidence 32 567899999999853
No 18
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.62 E-value=3.5e-15 Score=161.80 Aligned_cols=173 Identities=17% Similarity=0.190 Sum_probs=119.6
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC------------------CCeEEEEeCCHHHHHHHHHHHHh
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP------------------HTFFVCGDINEKLVLKTQANVLH 357 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~------------------~~~v~G~Did~~al~~Ar~Nl~~ 357 (494)
+..++..|+.++.+.++.+|+||+||||+|++.++.... ...++|+|+++.+++.|+.|+..
T Consensus 154 P~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 345677788888888899999999999999999886421 14799999999999999999998
Q ss_pred ccCCCCcccceeeeeecccccc-CCCCCeeEEEEcCCCccccCCc--cc----hHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 358 NSGNLNRELKVSPLVCNVRQLC-FKPACVDGIVTDLPFGKRVGSK--SN----NFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 358 ~g~~~~~~~~i~~~~~Da~~l~-~~~~~~D~IVtNPPYG~r~~~~--~~----~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.|+.......+.+.++|+...+ .....||+||+||||+...... .+ ....+-.|+..+.++|+|| |++++++
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g-Gr~a~V~ 312 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG-GRAAVVV 312 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC-CEEEEEe
Confidence 7752110112578899987653 3346899999999998654211 00 0112347889999999999 9999999
Q ss_pred cCHHH--------HHHHHHhccccceeeeeEE-----EccCCceEEEEEEeeCCC
Q psy19 431 SDRKH--------LIQALHITSALWKCRKQIK-----INMSGMKSFVFILNRTAD 472 (494)
Q Consensus 431 ~~~~~--------l~~~l~~~~~l~~~~~~~~-----v~~Ggl~~~i~v~~~~~~ 472 (494)
|+..+ +++.+.+... ....+. +++-+..+.|+++.+...
T Consensus 313 p~~~L~~~~~~~~iR~~L~~~~~---l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~~ 364 (541)
T 2ar0_A 313 PDNVLFEGGKGTDIRRDLMDKCH---LHTILRLPTGIFYAQGVKTNVLFFTKGTV 364 (541)
T ss_dssp EHHHHHCCTHHHHHHHHHHHHEE---EEEEEECCSSCSSSCSCCEEEEEEEEBCS
T ss_pred cCcceecCcHHHHHHHHHhhcCC---EEEEEEcCcCcccCCCCcEEEEEEECCCC
Confidence 86532 2233322221 111111 233478889999987553
No 19
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.62 E-value=1.3e-15 Score=168.86 Aligned_cols=144 Identities=14% Similarity=0.105 Sum_probs=105.6
Q ss_pred cccccchHHHHHHHHHHh----C--CCCCCEEEEEcCCcChHHHHHHhcCC---CCeEEEEeCCHHHHHHH--HHHHHhc
Q psy19 290 FNITTLKPTIAYNMVRLA----S--PIPGDVFLDPMCGGGTIPVECSLSYP---HTFFVCGDINEKLVLKT--QANVLHN 358 (494)
Q Consensus 290 ~~~a~L~e~lAa~ll~la----~--~~~g~~VLDP~CGSGtilIEAA~~~~---~~~v~G~Did~~al~~A--r~Nl~~~ 358 (494)
.|..++++.+|..|+.++ . +.++.+|||||||||+|+++++...+ ...++|+|+|+.+++.| +.|+..+
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 355667788888888872 2 34688999999999999999998754 35799999999999999 8888764
Q ss_pred cCCCCcccceeeeeecccccc-CCCCCeeEEEEcCCCccccCCccc---------------------hHHHHHHHHHHHh
Q psy19 359 SGNLNRELKVSPLVCNVRQLC-FKPACVDGIVTDLPFGKRVGSKSN---------------------NFLLYRLFLIEIG 416 (494)
Q Consensus 359 g~~~~~~~~i~~~~~Da~~l~-~~~~~~D~IVtNPPYG~r~~~~~~---------------------~~~ly~~fL~~l~ 416 (494)
++..++. ...+...|+.... .....||+||+||||+........ ...+|..|+..+.
T Consensus 374 ~LlhGi~-~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al 452 (878)
T 3s1s_A 374 QLVSSNN-APTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVT 452 (878)
T ss_dssp TTCBTTB-CCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHH
T ss_pred hhhcCCC-cceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHH
Confidence 4322221 1245566666532 223689999999999764332111 1135778999999
Q ss_pred hcccCCCcEEEEEecCHHH
Q psy19 417 KIVRPQIGRAILLTSDRKH 435 (494)
Q Consensus 417 rvLkpg~G~lvllt~~~~~ 435 (494)
++|++| |++++++|+.-+
T Consensus 453 ~lLKpG-GrLAfIlP~s~L 470 (878)
T 3s1s_A 453 ELVQDG-TVISAIMPKQYL 470 (878)
T ss_dssp HHSCTT-CEEEEEEETHHH
T ss_pred HhcCCC-cEEEEEEChHHh
Confidence 999999 999999998654
No 20
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.62 E-value=2.9e-15 Score=139.25 Aligned_cols=128 Identities=13% Similarity=0.116 Sum_probs=97.8
Q ss_pred cccchHHHHHHHHHHhCC---CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccce
Q psy19 292 ITTLKPTIAYNMVRLASP---IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKV 368 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~---~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i 368 (494)
..|..+.++..++..... .++.+|||+|||+|.++++++.. +...++|+|+++.+++.|++|+..+++ .++
T Consensus 22 ~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v 95 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGL-----SGA 95 (189)
T ss_dssp C---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTC-----SCE
T ss_pred CccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCC-----Cce
Confidence 334455555555554422 47889999999999999988775 345899999999999999999998764 357
Q ss_pred eeeeecccccc--CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhh--cccCCCcEEEEEecCH
Q psy19 369 SPLVCNVRQLC--FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGK--IVRPQIGRAILLTSDR 433 (494)
Q Consensus 369 ~~~~~Da~~l~--~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~r--vLkpg~G~lvllt~~~ 433 (494)
+++++|+.+++ +.+++||+|++||||.... ..+..++..+.+ +|+|| |.+++.++..
T Consensus 96 ~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~-------~~~~~~l~~~~~~~~L~pg-G~l~~~~~~~ 156 (189)
T 3p9n_A 96 TLRRGAVAAVVAAGTTSPVDLVLADPPYNVDS-------ADVDAILAALGTNGWTREG-TVAVVERATT 156 (189)
T ss_dssp EEEESCHHHHHHHCCSSCCSEEEECCCTTSCH-------HHHHHHHHHHHHSSSCCTT-CEEEEEEETT
T ss_pred EEEEccHHHHHhhccCCCccEEEECCCCCcch-------hhHHHHHHHHHhcCccCCC-eEEEEEecCC
Confidence 89999998873 3357899999999987431 235567778888 99999 9999877654
No 21
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.61 E-value=2.1e-15 Score=163.37 Aligned_cols=173 Identities=14% Similarity=0.122 Sum_probs=119.5
Q ss_pred cccccccchHHHHHHHHHHhC----CCCCCEEEEEcCCcChHHHHHHhcC---CCCeEEEEeCCHHHHHHHHHHHHhccC
Q psy19 288 VEFNITTLKPTIAYNMVRLAS----PIPGDVFLDPMCGGGTIPVECSLSY---PHTFFVCGDINEKLVLKTQANVLHNSG 360 (494)
Q Consensus 288 ~~~~~a~L~e~lAa~ll~la~----~~~g~~VLDP~CGSGtilIEAA~~~---~~~~v~G~Did~~al~~Ar~Nl~~~g~ 360 (494)
.+++|.+ ++..|+.++. +.++.+|+||+||||+|+++++... ....++|+|+++.++.+|+.|+..+|+
T Consensus 198 ~fyTP~~----Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 273 (542)
T 3lkd_A 198 EFYTPQP----VAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV 273 (542)
T ss_dssp SCCCCHH----HHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred eecccHH----HHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC
Confidence 4555544 5555555554 5678899999999999999998764 246899999999999999999998875
Q ss_pred CCCcccceeeeeeccccc--c-CCCCCeeEEEEcCCCccccCCccch---------------HHHHHHHHHHHhhccc-C
Q psy19 361 NLNRELKVSPLVCNVRQL--C-FKPACVDGIVTDLPFGKRVGSKSNN---------------FLLYRLFLIEIGKIVR-P 421 (494)
Q Consensus 361 ~~~~~~~i~~~~~Da~~l--~-~~~~~~D~IVtNPPYG~r~~~~~~~---------------~~ly~~fL~~l~rvLk-p 421 (494)
. ...+.+.++|+... | .....||+||+||||+...+..... ....-.|+..+.+.|+ +
T Consensus 274 ~---~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~ 350 (542)
T 3lkd_A 274 P---IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQD 350 (542)
T ss_dssp C---GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTT
T ss_pred C---cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCC
Confidence 2 13567899998876 3 2346899999999998654321100 0011258899999999 9
Q ss_pred CCcEEEEEecCHHHH--------HHHHHhccccceeeeeEE-----EccCCceEEEEEEeeCC
Q psy19 422 QIGRAILLTSDRKHL--------IQALHITSALWKCRKQIK-----INMSGMKSFVFILNRTA 471 (494)
Q Consensus 422 g~G~lvllt~~~~~l--------~~~l~~~~~l~~~~~~~~-----v~~Ggl~~~i~v~~~~~ 471 (494)
| |++++|+|+.-++ ++.+-+... ....+. +.+-+..+.|+++.+..
T Consensus 351 g-Gr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~---l~~II~LP~~lF~~t~i~t~Ilvl~K~k 409 (542)
T 3lkd_A 351 N-GVMAIVLPHGVLFRGNAEGTIRKALLEEGA---IDTVIGLPANIFFNTSIPTTVIILKKNR 409 (542)
T ss_dssp T-CEEEEEEETHHHHCCTHHHHHHHHHHHTTC---EEEEEECCSSCSSSCCCCEEEEEECSSC
T ss_pred c-eeEEEEecchHhhCCchhHHHHHHHHhCCc---eeEEEEccccccCCCCCcEEEEEEecCC
Confidence 9 9999999976432 222222221 111111 23456778888887754
No 22
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.61 E-value=9.4e-15 Score=145.16 Aligned_cols=105 Identities=12% Similarity=0.066 Sum_probs=88.7
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
.+++.+|||+|||+|++++.+|...+. .|+|+|+++.+++.|++|+..+++ .+++.++++|+.+++. .++||+|
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~----~~~v~~~~~D~~~~~~-~~~fD~V 196 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFPG-ENIADRI 196 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCCC-CSCEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC----CceEEEEECCHHHhcc-cCCccEE
Confidence 357899999999999999999988543 799999999999999999998875 3457899999999865 5789999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
++|||++. ..++.++.++|+|| |.+++.+..
T Consensus 197 i~~~p~~~------------~~~l~~~~~~Lkpg-G~l~~~~~~ 227 (278)
T 2frn_A 197 LMGYVVRT------------HEFIPKALSIAKDG-AIIHYHNTV 227 (278)
T ss_dssp EECCCSSG------------GGGHHHHHHHEEEE-EEEEEEEEE
T ss_pred EECCchhH------------HHHHHHHHHHCCCC-eEEEEEEee
Confidence 99999754 24555788999999 999886654
No 23
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.61 E-value=9.7e-15 Score=152.41 Aligned_cols=149 Identities=11% Similarity=-0.008 Sum_probs=109.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-CCCCCeeEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-FKPACVDGI 388 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~~~~~~D~I 388 (494)
++|.+|||+|||+|.+++.+|.. ++.|+|+|+++.+++.|++|++.+++. . .+.++|++++. ...+.||+|
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~----~--~~~~~D~~~~l~~~~~~fD~I 284 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLR----V--DIRHGEALPTLRGLEGPFHHV 284 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC----C--EEEESCHHHHHHTCCCCEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCC----C--cEEEccHHHHHHHhcCCCCEE
Confidence 46899999999999999999987 566999999999999999999998762 1 45689998762 212459999
Q ss_pred EEcCCCccc-cCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH----HHHHHHHHhccccceeeeeEEEccCCceEE
Q psy19 389 VTDLPFGKR-VGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR----KHLIQALHITSALWKCRKQIKINMSGMKSF 463 (494)
Q Consensus 389 VtNPPYG~r-~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~----~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~~ 463 (494)
++||||-.. .....+....|..++..+.++|+|| |.+++.++.. ..+.+.+..... . .| ..
T Consensus 285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpG-G~Lv~~s~s~~~~~~~f~~~v~~a~~--~---------~g--~~ 350 (393)
T 4dmg_A 285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEE-GFLWLSSCSYHLRLEDLLEVARRAAA--D---------LG--RR 350 (393)
T ss_dssp EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCTTSCHHHHHHHHHHHHH--H---------HT--CC
T ss_pred EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECCCCCCHHHHHHHHHHHHH--H---------hC--Ce
Confidence 999997332 1122234567889999999999999 9999877743 234444432210 0 11 23
Q ss_pred EEEEeeCCCCCCCcccC
Q psy19 464 VFILNRTADLFDYAIHG 480 (494)
Q Consensus 464 i~v~~~~~~~~d~~~~~ 480 (494)
+.+++...+++|||+..
T Consensus 351 ~~i~~~~~~~~DhP~~~ 367 (393)
T 4dmg_A 351 LRVHRVTYQPEDHPWSL 367 (393)
T ss_dssp EEEEEEEECCTTSCEET
T ss_pred EEEEEEcCCCCCCCcCC
Confidence 45567788999999854
No 24
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=6.7e-15 Score=152.68 Aligned_cols=126 Identities=13% Similarity=0.144 Sum_probs=97.5
Q ss_pred HHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC
Q psy19 301 YNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF 380 (494)
Q Consensus 301 a~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~ 380 (494)
..++......++.+|||+|||+|.++++++..+|+..|+|+|+++.+++.|++|+..+++.. ...+.+..+|+.+ ++
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~--~~~v~~~~~D~~~-~~ 288 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA--LDRCEFMINNALS-GV 288 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGG--GGGEEEEECSTTT-TC
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCc--CceEEEEechhhc-cC
Confidence 34555556666789999999999999999999988999999999999999999999887521 1246779999987 45
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
++++||+|++||||........ .....+++++.++|+|| |++++++...
T Consensus 289 ~~~~fD~Ii~nppfh~~~~~~~---~~~~~~l~~~~~~Lkpg-G~l~iv~n~~ 337 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHALTD---NVAWEMFHHARRCLKIN-GELYIVANRH 337 (375)
T ss_dssp CTTCEEEEEECCCC-------C---CHHHHHHHHHHHHEEEE-EEEEEEEETT
T ss_pred CCCCeeEEEECCCcccCcccCH---HHHHHHHHHHHHhCCCC-cEEEEEEECC
Confidence 5578999999999974322111 12446788999999999 9999987754
No 25
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.59 E-value=7.2e-15 Score=146.70 Aligned_cols=135 Identities=13% Similarity=0.057 Sum_probs=103.9
Q ss_pred ccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceee
Q psy19 291 NITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSP 370 (494)
Q Consensus 291 ~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~ 370 (494)
.|.|..+.+...++......++.+|||+|||+|.+++.++.. ++..++|+|+++.+++.|++|+..+++ ..++.+
T Consensus 103 ipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l----~~~v~~ 177 (284)
T 1nv8_A 103 VPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV----SDRFFV 177 (284)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC----TTSEEE
T ss_pred ecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC----CCceEE
Confidence 467778888888887665456779999999999999999988 889999999999999999999998765 345789
Q ss_pred eeeccccccCCCCCe---eEEEEcCCCccccCC------ccchHHHH-----HHHHHHHh-hcccCCCcEEEEEecCH
Q psy19 371 LVCNVRQLCFKPACV---DGIVTDLPFGKRVGS------KSNNFLLY-----RLFLIEIG-KIVRPQIGRAILLTSDR 433 (494)
Q Consensus 371 ~~~Da~~l~~~~~~~---D~IVtNPPYG~r~~~------~~~~~~ly-----~~fL~~l~-rvLkpg~G~lvllt~~~ 433 (494)
+++|+.+. ++ ++| |+||+||||...... ......++ ..+++++. +.|+|| |.+++..+..
T Consensus 178 ~~~D~~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pg-G~l~~e~~~~ 252 (284)
T 1nv8_A 178 RKGEFLEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSG-KIVLMEIGED 252 (284)
T ss_dssp EESSTTGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTT-CEEEEECCTT
T ss_pred EECcchhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCC-CEEEEEECch
Confidence 99999874 22 478 999999999743210 00011111 14566788 999999 9999877653
No 26
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.58 E-value=8.4e-15 Score=134.17 Aligned_cols=126 Identities=15% Similarity=0.150 Sum_probs=95.0
Q ss_pred cchHHHHHHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 294 TLKPTIAYNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 294 ~L~e~lAa~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
|..+.+...++.... ..++.+|||+|||+|.++++++.. +...++|+|+++.+++.|++|+..+++ ..++.+++
T Consensus 13 p~~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~ 87 (177)
T 2esr_A 13 PTSDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKA----ENRFTLLK 87 (177)
T ss_dssp -----CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTC----GGGEEEEC
T ss_pred cCHHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCC----CCceEEEE
Confidence 344556666666655 667889999999999999998887 446999999999999999999997654 44678999
Q ss_pred eccccc-cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHh--hcccCCCcEEEEEecCHH
Q psy19 373 CNVRQL-CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIG--KIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 373 ~Da~~l-~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~--rvLkpg~G~lvllt~~~~ 434 (494)
+|+.+. +...+.||+|++||||... .+..++..+. ++|+|| |.+++.++...
T Consensus 88 ~d~~~~~~~~~~~fD~i~~~~~~~~~---------~~~~~~~~l~~~~~L~~g-G~l~~~~~~~~ 142 (177)
T 2esr_A 88 MEAERAIDCLTGRFDLVFLDPPYAKE---------TIVATIEALAAKNLLSEQ-VMVVCETDKTV 142 (177)
T ss_dssp SCHHHHHHHBCSCEEEEEECCSSHHH---------HHHHHHHHHHHTTCEEEE-EEEEEEEETTC
T ss_pred CcHHHhHHhhcCCCCEEEECCCCCcc---------hHHHHHHHHHhCCCcCCC-cEEEEEECCcc
Confidence 999874 4333579999999998521 1334445555 999999 99998877654
No 27
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.58 E-value=9.1e-15 Score=134.37 Aligned_cols=129 Identities=13% Similarity=0.140 Sum_probs=100.7
Q ss_pred ccccchHHHHHHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCccccee
Q psy19 291 NITTLKPTIAYNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVS 369 (494)
Q Consensus 291 ~~a~L~e~lAa~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~ 369 (494)
.+.|..+.++..++.... ..++.+|||+|||+|.++++++.. +...++|+|+++.+++.|++|+..+++ ..++.
T Consensus 23 ~~rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~ 97 (187)
T 2fhp_A 23 NTRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKE----PEKFE 97 (187)
T ss_dssp SSCCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTC----GGGEE
T ss_pred CcCcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCC----CcceE
Confidence 355677888888887774 457889999999999999988874 346899999999999999999998764 34678
Q ss_pred eeeecccccc----CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHH--hhcccCCCcEEEEEecCHH
Q psy19 370 PLVCNVRQLC----FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEI--GKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 370 ~~~~Da~~l~----~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l--~rvLkpg~G~lvllt~~~~ 434 (494)
++++|+.+.. ..+++||+|++||||... ... .++..+ .++|+|| |.+++.++...
T Consensus 98 ~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~-----~~~----~~~~~l~~~~~L~~g-G~l~~~~~~~~ 158 (187)
T 2fhp_A 98 VRKMDANRALEQFYEEKLQFDLVLLDPPYAKQ-----EIV----SQLEKMLERQLLTNE-AVIVCETDKTV 158 (187)
T ss_dssp EEESCHHHHHHHHHHTTCCEEEEEECCCGGGC-----CHH----HHHHHHHHTTCEEEE-EEEEEEEETTC
T ss_pred EEECcHHHHHHHHHhcCCCCCEEEECCCCCch-----hHH----HHHHHHHHhcccCCC-CEEEEEeCCcc
Confidence 9999998742 124789999999998732 122 233344 8899999 99998877654
No 28
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.57 E-value=8.7e-15 Score=152.44 Aligned_cols=159 Identities=17% Similarity=0.186 Sum_probs=112.8
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
..+.++..|+.++...++.+|||||||+|.++++++... +...++|+|+++.+++.| ..+.+.++
T Consensus 23 TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~~~~~~~ 88 (421)
T 2ih2_A 23 TPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PWAEGILA 88 (421)
T ss_dssp CCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TTEEEEES
T ss_pred CCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CCCcEEeC
Confidence 457788888888876667799999999999999998764 467999999999998776 13578999
Q ss_pred ccccccCCCCCeeEEEEcCCCccccCC-------ccchH--------------HHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 374 NVRQLCFKPACVDGIVTDLPFGKRVGS-------KSNNF--------------LLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 374 Da~~l~~~~~~~D~IVtNPPYG~r~~~-------~~~~~--------------~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
|+...+. .+.||+||+||||+..... ..... ++|..|++.+.++|+|| |++++++++
T Consensus 89 D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~-G~~~~i~p~ 166 (421)
T 2ih2_A 89 DFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPG-GVLVFVVPA 166 (421)
T ss_dssp CGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEE-EEEEEEEEG
T ss_pred ChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCC-CEEEEEECh
Confidence 9988753 3689999999999865331 11122 25668999999999999 999999886
Q ss_pred H-------HHHHHHHHhccccceeeeeEE--EccCCceEEEEEEeeCC
Q psy19 433 R-------KHLIQALHITSALWKCRKQIK--INMSGMKSFVFILNRTA 471 (494)
Q Consensus 433 ~-------~~l~~~l~~~~~l~~~~~~~~--v~~Ggl~~~i~v~~~~~ 471 (494)
. ..+.+.+.+.+. .....+. +...+..+.++++.+..
T Consensus 167 ~~l~~~~~~~lr~~l~~~~~--~~i~~l~~~F~~~~~~~~il~~~k~~ 212 (421)
T 2ih2_A 167 TWLVLEDFALLREFLAREGK--TSVYYLGEVFPQKKVSAVVIRFQKSG 212 (421)
T ss_dssp GGGTCGGGHHHHHHHHHHSE--EEEEEEESCSTTCCCCEEEEEEESSS
T ss_pred HHhcCccHHHHHHHHHhcCC--eEEEECCCCCCCCCccEEEEEEEeCC
Confidence 3 335555554432 1111111 12334556666666543
No 29
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.57 E-value=7.2e-15 Score=138.70 Aligned_cols=125 Identities=12% Similarity=0.110 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHhCC-CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 296 KPTIAYNMVRLASP-IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 296 ~e~lAa~ll~la~~-~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
.+.+...++..... .++.+|||+|||+|.++++++... ...|+|+|+++.+++.|++|+..+++. ..++.++++|
T Consensus 37 ~~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~~v~~~~~d 112 (201)
T 2ift_A 37 GDRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCS---SEQAEVINQS 112 (201)
T ss_dssp -CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCC---TTTEEEECSC
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCC---ccceEEEECC
Confidence 33444444444332 267899999999999999877663 258999999999999999999987641 1357899999
Q ss_pred cccccC--CCCC-eeEEEEcCCCccccCCccchHHHHHHHHHHH--hhcccCCCcEEEEEecCHH
Q psy19 375 VRQLCF--KPAC-VDGIVTDLPFGKRVGSKSNNFLLYRLFLIEI--GKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 375 a~~l~~--~~~~-~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l--~rvLkpg~G~lvllt~~~~ 434 (494)
+.++.. .+++ ||+|++||||.. + . +..+++.+ .++|+|| |.+++.+....
T Consensus 113 ~~~~~~~~~~~~~fD~I~~~~~~~~--~---~----~~~~l~~~~~~~~Lkpg-G~l~i~~~~~~ 167 (201)
T 2ift_A 113 SLDFLKQPQNQPHFDVVFLDPPFHF--N---L----AEQAISLLCENNWLKPN-ALIYVETEKDK 167 (201)
T ss_dssp HHHHTTSCCSSCCEEEEEECCCSSS--C---H----HHHHHHHHHHTTCEEEE-EEEEEEEESSS
T ss_pred HHHHHHhhccCCCCCEEEECCCCCC--c---c----HHHHHHHHHhcCccCCC-cEEEEEECCCC
Confidence 987632 2468 999999999862 1 2 34455566 6789999 99988776543
No 30
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.56 E-value=1e-13 Score=127.20 Aligned_cols=122 Identities=16% Similarity=0.159 Sum_probs=100.3
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCccc-ceeeeeeccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNREL-KVSPLVCNVR 376 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~-~i~~~~~Da~ 376 (494)
..+..++......++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++|+..+++ .. ++.+.++|+.
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~~~~~~~~d~~ 112 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNL----DNYDIRVVHSDLY 112 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTC----TTSCEEEEECSTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCC----CccceEEEECchh
Confidence 45666777778788899999999999999998887 68999999999999999999987764 22 3789999988
Q ss_pred cccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 377 QLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 377 ~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
+. +.+++||+|++||||... ...+..+++.+.++|+|| |.+++.++...
T Consensus 113 ~~-~~~~~~D~v~~~~~~~~~-------~~~~~~~l~~~~~~L~~g-G~l~~~~~~~~ 161 (194)
T 1dus_A 113 EN-VKDRKYNKIITNPPIRAG-------KEVLHRIIEEGKELLKDN-GEIWVVIQTKQ 161 (194)
T ss_dssp TT-CTTSCEEEEEECCCSTTC-------HHHHHHHHHHHHHHEEEE-EEEEEEEESTH
T ss_pred cc-cccCCceEEEECCCcccc-------hhHHHHHHHHHHHHcCCC-CEEEEEECCCC
Confidence 74 345689999999998631 223567888999999999 99999888643
No 31
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.56 E-value=7.5e-14 Score=131.07 Aligned_cols=133 Identities=11% Similarity=0.029 Sum_probs=108.0
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.+.+.++......++.+|||+|||+|.+++.++..++...++|+|+++.+++.|++|+..+++ .++.++++|
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d 98 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-----RNVTLVEAF 98 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-----TTEEEEECC
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-----CcEEEEeCC
Confidence 667777788888888899999999999999999999998779999999999999999999998764 357899999
Q ss_pred cccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH---HHHHHHHhcc
Q psy19 375 VRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK---HLIQALHITS 444 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~---~l~~~l~~~~ 444 (494)
+.+.......||+|++++++. + +..+++++.++|+|| |++++.+.... .+.+.+.+.+
T Consensus 99 ~~~~~~~~~~~D~i~~~~~~~-------~----~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 99 APEGLDDLPDPDRVFIGGSGG-------M----LEEIIDAVDRRLKSE-GVIVLNAVTLDTLTKAVEFLEDHG 159 (204)
T ss_dssp TTTTCTTSCCCSEEEESCCTT-------C----HHHHHHHHHHHCCTT-CEEEEEECBHHHHHHHHHHHHHTT
T ss_pred hhhhhhcCCCCCEEEECCCCc-------C----HHHHHHHHHHhcCCC-eEEEEEecccccHHHHHHHHHHCC
Confidence 976533336799999998764 1 456777899999999 99999877543 2344444444
No 32
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.56 E-value=1.3e-13 Score=127.12 Aligned_cols=116 Identities=10% Similarity=-0.005 Sum_probs=88.1
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-CCCCCee
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-FKPACVD 386 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~~~~~~D 386 (494)
...++.+|||+|||+|.+++.+|.. +..|+|+|+++.+++.|++|+..+++ .++.+++.|+..++ +.+++||
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~~~~~~l~~~~~~~fD 91 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGI-----ENTELILDGHENLDHYVREPIR 91 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTC-----CCEEEEESCGGGGGGTCCSCEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCcHHHHHhhccCCcC
Confidence 4568899999999999999999987 78999999999999999999998764 35688888887753 3457899
Q ss_pred EEEEcCCCccccCC-ccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 387 GIVTDLPFGKRVGS-KSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 387 ~IVtNPPYG~r~~~-~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+|++|+||-..... ..........+++++.++|||| |+++++..
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 136 (185)
T 3mti_A 92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY 136 (185)
T ss_dssp EEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred EEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 99999887432110 0012233456788999999999 99988754
No 33
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.55 E-value=1.5e-14 Score=136.57 Aligned_cols=125 Identities=11% Similarity=0.105 Sum_probs=93.0
Q ss_pred cchHHHHHHHHHHhCCC-CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 294 TLKPTIAYNMVRLASPI-PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 294 ~L~e~lAa~ll~la~~~-~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
|..+.+...++.+.... ++.+|||+|||+|.++++++... ...|+|+|+++.+++.|++|+..+++ .++.+++
T Consensus 36 p~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~ 109 (202)
T 2fpo_A 36 PTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKA-----GNARVVN 109 (202)
T ss_dssp --CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEEC
T ss_pred CCHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEE
Confidence 34455555665554432 67899999999999999877763 24899999999999999999998764 3578999
Q ss_pred eccccc-cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHh--hcccCCCcEEEEEecCHH
Q psy19 373 CNVRQL-CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIG--KIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 373 ~Da~~l-~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~--rvLkpg~G~lvllt~~~~ 434 (494)
+|+.+. +...++||+|++||||.. + . +..+++.+. ++|+|| |.+++.+....
T Consensus 110 ~D~~~~~~~~~~~fD~V~~~~p~~~--~---~----~~~~l~~l~~~~~L~pg-G~l~i~~~~~~ 164 (202)
T 2fpo_A 110 SNAMSFLAQKGTPHNIVFVDPPFRR--G---L----LEETINLLEDNGWLADE-ALIYVESEVEN 164 (202)
T ss_dssp SCHHHHHSSCCCCEEEEEECCSSST--T---T----HHHHHHHHHHTTCEEEE-EEEEEEEEGGG
T ss_pred CCHHHHHhhcCCCCCEEEECCCCCC--C---c----HHHHHHHHHhcCccCCC-cEEEEEECCCc
Confidence 999874 544568999999999872 1 1 334444554 469999 99888766543
No 34
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.55 E-value=1.3e-13 Score=140.77 Aligned_cols=115 Identities=17% Similarity=0.114 Sum_probs=91.1
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCccc-ceeeeeeccccccCC----CC
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNREL-KVSPLVCNVRQLCFK----PA 383 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~-~i~~~~~Da~~l~~~----~~ 383 (494)
..++.+|||+|||+|.+++.+|.. ++.|+|+|+++.+++.|++|+..+++ .. ++.++++|+.++... ..
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl----~~~~v~~i~~D~~~~l~~~~~~~~ 224 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGL----EQAPIRWICEDAMKFIQREERRGS 224 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTC----TTSCEEEECSCHHHHHHHHHHHTC
T ss_pred cCCCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC----CccceEEEECcHHHHHHHHHhcCC
Confidence 346789999999999999999986 56999999999999999999998875 22 478999999876321 36
Q ss_pred CeeEEEEcCCC-cccc-CCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 384 CVDGIVTDLPF-GKRV-GSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 384 ~~D~IVtNPPY-G~r~-~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+||+||+|||| +... .........|..++..+.++|+|| |.+++.+
T Consensus 225 ~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lkpg-G~lli~~ 272 (332)
T 2igt_A 225 TYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPK-ALGLVLT 272 (332)
T ss_dssp CBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTT-CCEEEEE
T ss_pred CceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcC-cEEEEEE
Confidence 89999999995 4321 111234566888999999999999 9866654
No 35
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.55 E-value=4.2e-14 Score=134.08 Aligned_cols=121 Identities=16% Similarity=0.193 Sum_probs=95.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc--CCCCCeeE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC--FKPACVDG 387 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~--~~~~~~D~ 387 (494)
.++.+|||+|||+|.+++.+|...|+..++|+|+++.+++.|++|+..+++ .++.++++|+..++ +++++||+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-----PNIKLLWVDGSDLTDYFEDGEIDR 114 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-----SSEEEEECCSSCGGGTSCTTCCSE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-----CCEEEEeCCHHHHHhhcCCCCCCE
Confidence 457899999999999999999998889999999999999999999998764 35789999999876 66678999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHH
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHL 436 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l 436 (494)
|++|+|-......+......+..++..+.++|+|| |.+++.+......
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~ 162 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPEN-GEIHFKTDNRGLF 162 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTT-CEEEEEESCHHHH
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCC-cEEEEEeCCHHHH
Confidence 99998843111001001113567888999999999 9999988765433
No 36
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.54 E-value=4.1e-14 Score=146.78 Aligned_cols=152 Identities=14% Similarity=0.112 Sum_probs=111.0
Q ss_pred hCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC----CC
Q psy19 307 ASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF----KP 382 (494)
Q Consensus 307 a~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~----~~ 382 (494)
+.. ++.+|||+|||+|++++.+|.. ...|+|+|+++.+++.|++|+..+++ .. +.++++|+.++.. ..
T Consensus 206 ~~~-~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~----~~-~~~~~~d~~~~~~~~~~~~ 277 (382)
T 1wxx_A 206 ERF-RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGL----GN-VRVLEANAFDLLRRLEKEG 277 (382)
T ss_dssp GGC-CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTC----TT-EEEEESCHHHHHHHHHHTT
T ss_pred Hhc-CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC----CC-ceEEECCHHHHHHHHHhcC
Confidence 344 7789999999999999999987 57899999999999999999998875 22 7899999987632 14
Q ss_pred CCeeEEEEcCCCcccc-CCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH----HHHHHHHHhccccceeeeeEEEcc
Q psy19 383 ACVDGIVTDLPFGKRV-GSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR----KHLIQALHITSALWKCRKQIKINM 457 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~-~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~----~~l~~~l~~~~~l~~~~~~~~v~~ 457 (494)
.+||+|++|||+.... .........|..++..+.++|+|| |.+++.++.. ..+...+...- ..
T Consensus 278 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~~~i~~~~-----------~~ 345 (382)
T 1wxx_A 278 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCSHHMTEPLFYAMVAEAA-----------QD 345 (382)
T ss_dssp CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCTTSCHHHHHHHHHHHH-----------HH
T ss_pred CCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECCCCCCHHHHHHHHHHHH-----------HH
Confidence 6899999999974332 222234566888999999999999 9999887743 22333332110 00
Q ss_pred CCceEEEEEEeeCCCCCCCcccC
Q psy19 458 SGMKSFVFILNRTADLFDYAIHG 480 (494)
Q Consensus 458 Ggl~~~i~v~~~~~~~~d~~~~~ 480 (494)
.|. .+.+++...+++|||...
T Consensus 346 ~g~--~~~~i~~~~~~~d~p~~~ 366 (382)
T 1wxx_A 346 AHR--LLRVVEKRGQPFDHPVLL 366 (382)
T ss_dssp TTC--CEEEEEEECCCTTSCCBT
T ss_pred cCC--eEEEEEcCCCCCCCCCCC
Confidence 122 234556778899999853
No 37
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.53 E-value=5.1e-14 Score=146.61 Aligned_cols=152 Identities=15% Similarity=0.094 Sum_probs=110.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC----CCCCe
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF----KPACV 385 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~----~~~~~ 385 (494)
+++.+|||+|||+|++++.+|.. ....|+|+|+++.+++.|++|+..+++ ..++.++++|+.++.. ...+|
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~----~~~v~~~~~d~~~~~~~~~~~~~~f 290 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGV----EDRMKFIVGSAFEEMEKLQKKGEKF 290 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC----CccceEEECCHHHHHHHHHhhCCCC
Confidence 47889999999999999999986 235899999999999999999998865 3367899999987632 24689
Q ss_pred eEEEEcCCCccccC-CccchHHHHHHHHHHHhhcccCCCcEEEEEecCH----HHHHHHHHhccccceeeeeEEEccCCc
Q psy19 386 DGIVTDLPFGKRVG-SKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR----KHLIQALHITSALWKCRKQIKINMSGM 460 (494)
Q Consensus 386 D~IVtNPPYG~r~~-~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~----~~l~~~l~~~~~l~~~~~~~~v~~Ggl 460 (494)
|+|++||||..... ........|..++..+.++|+|| |.+++.+++. ..+...+.... . ..
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~~~~~~~~~~~~~v~~~~---~----------~~ 356 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCSQHVDLQMFKDMIIAAG---A----------KA 356 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECCTTSCHHHHHHHHHHHH---H----------HT
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEECCCCCCHHHHHHHHHHHH---H----------Hc
Confidence 99999999754321 11123356788999999999999 9999887753 22333332211 0 01
Q ss_pred eEEEEEEe-eCCCCCCCcccC
Q psy19 461 KSFVFILN-RTADLFDYAIHG 480 (494)
Q Consensus 461 ~~~i~v~~-~~~~~~d~~~~~ 480 (494)
...+.++. ...+++|||...
T Consensus 357 ~~~~~~i~~~~~~~~d~p~~~ 377 (396)
T 2as0_A 357 GKFLKMLEPYRTQAPDHPILM 377 (396)
T ss_dssp TEEEEESSCBBCSCTTSCCBT
T ss_pred CCeEEEEeccCCCCCCCCcCC
Confidence 12345556 778999999853
No 38
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.53 E-value=1.5e-13 Score=133.19 Aligned_cols=134 Identities=19% Similarity=0.204 Sum_probs=109.1
Q ss_pred cccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceee
Q psy19 292 ITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSP 370 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~ 370 (494)
..++.+..+..++.++...++.+|||+|||+|.+++.++.. .|+..++|+|+++.+++.|++|++.+++ .+++.+
T Consensus 74 ~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~v~~ 149 (255)
T 3mb5_A 74 PQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF----DDRVTI 149 (255)
T ss_dssp SCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC----TTTEEE
T ss_pred cccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC----CCceEE
Confidence 44567777888899999999999999999999999999987 7788999999999999999999998765 345789
Q ss_pred eeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHH---HHHHHhcc
Q psy19 371 LVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHL---IQALHITS 444 (494)
Q Consensus 371 ~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l---~~~l~~~~ 444 (494)
.++|+.+. +++++||+|++|||.. ..+++++.++|+|| |++++.++..... .+.+.+.+
T Consensus 150 ~~~d~~~~-~~~~~~D~v~~~~~~~-------------~~~l~~~~~~L~~g-G~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 150 KLKDIYEG-IEEENVDHVILDLPQP-------------ERVVEHAAKALKPG-GFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp ECSCGGGC-CCCCSEEEEEECSSCG-------------GGGHHHHHHHEEEE-EEEEEEESSHHHHHHHHHHHHHTG
T ss_pred EECchhhc-cCCCCcCEEEECCCCH-------------HHHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHHcC
Confidence 99999875 5567899999999843 13456789999999 9999998865433 33444443
No 39
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.53 E-value=1.5e-13 Score=142.76 Aligned_cols=127 Identities=20% Similarity=0.136 Sum_probs=101.3
Q ss_pred chHHHHHHHHHHhC--CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 295 LKPTIAYNMVRLAS--PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 295 L~e~lAa~ll~la~--~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
-...+...+..... ..++.+|||+|||+|.+++.++.. +..|+|+|+++.+++.|++|+..+++ .+.+++
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~------~v~~~~ 286 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANAL------KAQALH 286 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTC------CCEEEE
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC------CeEEEE
Confidence 34555666655553 346789999999999999999987 67999999999999999999998764 257899
Q ss_pred eccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
+|+.+.+..+++||+|++||||...... ....+..++.++.++|+|| |++++++...
T Consensus 287 ~D~~~~~~~~~~fD~Ii~npp~~~~~~~---~~~~~~~~l~~~~~~LkpG-G~l~iv~n~~ 343 (381)
T 3dmg_A 287 SDVDEALTEEARFDIIVTNPPFHVGGAV---ILDVAQAFVNVAAARLRPG-GVFFLVSNPF 343 (381)
T ss_dssp CSTTTTSCTTCCEEEEEECCCCCTTCSS---CCHHHHHHHHHHHHHEEEE-EEEEEEECTT
T ss_pred cchhhccccCCCeEEEEECCchhhcccc---cHHHHHHHHHHHHHhcCcC-cEEEEEEcCC
Confidence 9999886655799999999999642211 1234667888999999999 9999987754
No 40
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.52 E-value=2.7e-13 Score=135.11 Aligned_cols=101 Identities=13% Similarity=0.087 Sum_probs=85.4
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
.++|.+|||+|||+|.+++.+|... .+.|+|+|+||.+++.+++|++.+++ .+++.++++|+++++. .+.||.|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v----~~~v~~~~~D~~~~~~-~~~~D~V 196 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFPG-ENIADRI 196 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCCC-CSCEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEeCcHHHhcc-ccCCCEE
Confidence 3589999999999999999999873 36899999999999999999999876 5678999999998854 3689999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
|+|||+... .|+..+.++|++| |.+.+
T Consensus 197 i~~~p~~~~------------~~l~~a~~~lk~g-G~ih~ 223 (278)
T 3k6r_A 197 LMGYVVRTH------------EFIPKALSIAKDG-AIIHY 223 (278)
T ss_dssp EECCCSSGG------------GGHHHHHHHEEEE-EEEEE
T ss_pred EECCCCcHH------------HHHHHHHHHcCCC-CEEEE
Confidence 999997531 3455678899998 87755
No 41
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.51 E-value=2e-13 Score=124.39 Aligned_cols=121 Identities=18% Similarity=0.146 Sum_probs=98.1
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
.++.+.+.++....+.++.+|||+|||+|.+++.++..+++..++|+|+++.+++.|++|+..+++ ..++ ++++|
T Consensus 9 t~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~-~~~~d 83 (178)
T 3hm2_A 9 TKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV----SDRI-AVQQG 83 (178)
T ss_dssp HHHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC----TTSE-EEECC
T ss_pred cHHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC----CCCE-EEecc
Confidence 456677788888888899999999999999999999888888999999999999999999997764 3356 77788
Q ss_pred ccc-ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 375 VRQ-LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 375 a~~-l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
+.+ ++...++||+|+++.++.. ..+++++.++|+|| |++++.+...
T Consensus 84 ~~~~~~~~~~~~D~i~~~~~~~~------------~~~l~~~~~~L~~g-G~l~~~~~~~ 130 (178)
T 3hm2_A 84 APRAFDDVPDNPDVIFIGGGLTA------------PGVFAAAWKRLPVG-GRLVANAVTV 130 (178)
T ss_dssp TTGGGGGCCSCCSEEEECC-TTC------------TTHHHHHHHTCCTT-CEEEEEECSH
T ss_pred hHhhhhccCCCCCEEEECCcccH------------HHHHHHHHHhcCCC-CEEEEEeecc
Confidence 754 2332268999999987643 25666899999999 9999877654
No 42
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.51 E-value=1.1e-13 Score=131.87 Aligned_cols=119 Identities=16% Similarity=0.253 Sum_probs=95.1
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc--CCCCCeeE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC--FKPACVDG 387 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~--~~~~~~D~ 387 (494)
.++..|||+|||+|.+++.+|..+|+..++|+|+++.+++.|++|+..+++ .++.++++|+..++ ++++++|.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-----~nv~~~~~d~~~l~~~~~~~~~d~ 111 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-----QNVKLLNIDADTLTDVFEPGEVKR 111 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-----SSEEEECCCGGGHHHHCCTTSCCE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-----CCEEEEeCCHHHHHhhcCcCCcCE
Confidence 357799999999999999999988889999999999999999999998764 34789999998875 56678999
Q ss_pred EEEcCC--CccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHH
Q psy19 388 IVTDLP--FGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHL 436 (494)
Q Consensus 388 IVtNPP--YG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l 436 (494)
|+++.| |....... ....+..+++++.++|+|| |.+++.+......
T Consensus 112 v~~~~~~p~~~~~~~~--~rl~~~~~l~~~~~~Lkpg-G~l~~~td~~~~~ 159 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEK--RRLTYSHFLKKYEEVMGKG-GSIHFKTDNRGLF 159 (213)
T ss_dssp EEEESCCCCCSGGGGG--GSTTSHHHHHHHHHHHTTS-CEEEEEESCHHHH
T ss_pred EEEECCCCCcCccccc--cccCcHHHHHHHHHHcCCC-CEEEEEeCCHHHH
Confidence 998854 43321111 1112567888999999999 9999998776543
No 43
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.51 E-value=4.1e-13 Score=130.39 Aligned_cols=144 Identities=10% Similarity=0.040 Sum_probs=99.0
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc---cCC---CCC
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL---CFK---PAC 384 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l---~~~---~~~ 384 (494)
++.+|||+|||+|.+++.++...++..++|+|+++.|++.|++|+..+++ ..++.++++|+.+. +++ +++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL----SDLIKVVKVPQKTLLMDALKEESEII 140 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTCSSTTTSTTCCSCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC----CccEEEEEcchhhhhhhhhhcccCCc
Confidence 56799999999999999988776678999999999999999999998764 34578999997652 343 258
Q ss_pred eeEEEEcCCCcccc---CC-----------c----c---------chHHHHHHHHHHHhhcccCCCcEEEEEecCH---H
Q psy19 385 VDGIVTDLPFGKRV---GS-----------K----S---------NNFLLYRLFLIEIGKIVRPQIGRAILLTSDR---K 434 (494)
Q Consensus 385 ~D~IVtNPPYG~r~---~~-----------~----~---------~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~---~ 434 (494)
||+|++||||.... .. . . ....++..++....++|+++ |.+....... .
T Consensus 141 fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~ 219 (254)
T 2h00_A 141 YDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRL-RWYSCMLGKKCSLA 219 (254)
T ss_dssp BSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGB-SCEEEEESSTTSHH
T ss_pred ccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccce-EEEEECCCChhHHH
Confidence 99999999996421 00 0 0 11234555666666777777 7655544321 3
Q ss_pred HHHHHHHhccccceeeeeEEEccCCce
Q psy19 435 HLIQALHITSALWKCRKQIKINMSGMK 461 (494)
Q Consensus 435 ~l~~~l~~~~~l~~~~~~~~v~~Ggl~ 461 (494)
.+.+.+.+.| +.......+..|...
T Consensus 220 ~~~~~l~~~G--f~~v~~~~~~~g~~~ 244 (254)
T 2h00_A 220 PLKEELRIQG--VPKVTYTEFCQGRTM 244 (254)
T ss_dssp HHHHHHHHTT--CSEEEEEEEEETTEE
T ss_pred HHHHHHHHcC--CCceEEEEEecCCce
Confidence 4556666666 455555555555443
No 44
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.51 E-value=4.2e-14 Score=152.94 Aligned_cols=168 Identities=20% Similarity=0.249 Sum_probs=114.6
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-------------CCCeEEEEeCCHHHHHHHHHHHHhccCC
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY-------------PHTFFVCGDINEKLVLKTQANVLHNSGN 361 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~-------------~~~~v~G~Did~~al~~Ar~Nl~~~g~~ 361 (494)
.+..++..|+.++.+.++.+|+||+||||+|+++|+... ....++|.|+++.++.+|+.|+...|..
T Consensus 201 TP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 201 TPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred CcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 345677888889999999999999999999999987531 1246999999999999999999988762
Q ss_pred CCcccceeeeeeccccccCC----CCCeeEEEEcCCCccccCCc--------cchHHHHHHHHHHHhhccc-------CC
Q psy19 362 LNRELKVSPLVCNVRQLCFK----PACVDGIVTDLPFGKRVGSK--------SNNFLLYRLFLIEIGKIVR-------PQ 422 (494)
Q Consensus 362 ~~~~~~i~~~~~Da~~l~~~----~~~~D~IVtNPPYG~r~~~~--------~~~~~ly~~fL~~l~rvLk-------pg 422 (494)
..++.++|....+.. ...||+||+|||||...... ......+-.|+..+.+.|+ +|
T Consensus 281 -----~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~g 355 (530)
T 3ufb_A 281 -----YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNG 355 (530)
T ss_dssp -----CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSC
T ss_pred -----cccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCC
Confidence 225777887665422 24799999999998543110 0001123356777777776 67
Q ss_pred CcEEEEEecCHHH--------HHHHHHhccccceeeeeEEE-----cc-CCceEEEEEEeeCC
Q psy19 423 IGRAILLTSDRKH--------LIQALHITSALWKCRKQIKI-----NM-SGMKSFVFILNRTA 471 (494)
Q Consensus 423 ~G~lvllt~~~~~--------l~~~l~~~~~l~~~~~~~~v-----~~-Ggl~~~i~v~~~~~ 471 (494)
|++++|+|+..+ +++.+-+.. .....+.+ +. -|..+.|+++++..
T Consensus 356 -Gr~avVlP~g~Lf~~~~~~~iRk~Lle~~---~l~aII~LP~~~F~~~tgi~t~Il~~~K~~ 414 (530)
T 3ufb_A 356 -GRAAVVVPNGTLFSDGISARIKEELLKNF---NLHTIVRLPEGVFAPYTDIAGNLLFFDRSG 414 (530)
T ss_dssp -CEEEEEEEHHHHHCCTHHHHHHHHHHHHS---EEEEEEECCTTTTTTTCCCCEEEEEEESSS
T ss_pred -ceEEEEecchhhhccchHHHHHHHHhhcC---EEEEEEECCcccCcCCCCCcEEEEEEECCC
Confidence 999999986432 222232221 12222221 23 47888899998754
No 45
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.51 E-value=8e-14 Score=133.72 Aligned_cols=122 Identities=13% Similarity=0.025 Sum_probs=97.2
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-c--CCCCCeeE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-C--FKPACVDG 387 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~--~~~~~~D~ 387 (494)
++.+|||+|||+|.+++.+|...|+..++|+|+++.+++.|++|+..+++ .++.++++|+.++ + ++++++|.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l-----~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL-----SNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC-----SSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC-----CcEEEEECCHHHHHHHHcCCCChhe
Confidence 56799999999999999999998889999999999999999999998764 2478999999885 3 56789999
Q ss_pred EEEc--CCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHH
Q psy19 388 IVTD--LPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQAL 440 (494)
Q Consensus 388 IVtN--PPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l 440 (494)
|+++ +||........ ..+...+++++.++|||| |.+++.|....+....+
T Consensus 109 v~~~~~~p~~~~~~~~r--r~~~~~~l~~~~r~LkpG-G~l~i~td~~~~~~~~~ 160 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKR--RIVQVPFAELVKSKLQLG-GVFHMATDWEPYAEHML 160 (218)
T ss_dssp EEEESCCCCCSGGGGGG--SSCSHHHHHHHHHHEEEE-EEEEEEESCHHHHHHHH
T ss_pred EEEeCCCCccchhhhhh--hhhhHHHHHHHHHHcCCC-cEEEEEeCCHHHHHHHH
Confidence 9999 77754321110 112346788999999999 99999998776544433
No 46
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.50 E-value=7.9e-13 Score=124.76 Aligned_cols=159 Identities=14% Similarity=0.070 Sum_probs=115.4
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+..++......++.+|||+|||+|.++..++... +...++|+|+++.+++.|++++...++ .++.+.++|+..+
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~ 100 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL-----KNVEVLKSEENKI 100 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEECBTTBC
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEecccccC
Confidence 3556667778889999999999999999998875 567999999999999999999987764 2578999999998
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC---------------HHHHHHHHHhc
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD---------------RKHLIQALHIT 443 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~---------------~~~l~~~l~~~ 443 (494)
++++++||+|+++..+..- .+ ...+++++.++|+|| |.+++.... ...+...+...
T Consensus 101 ~~~~~~fD~v~~~~~l~~~----~~----~~~~l~~~~~~Lkpg-G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 171 (219)
T 3dh0_A 101 PLPDNTVDFIFMAFTFHEL----SE----PLKFLEELKRVAKPF-AYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDA 171 (219)
T ss_dssp SSCSSCEEEEEEESCGGGC----SS----HHHHHHHHHHHEEEE-EEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHT
T ss_pred CCCCCCeeEEEeehhhhhc----CC----HHHHHHHHHHHhCCC-eEEEEEEecccccccCCchhcccCHHHHHHHHHHC
Confidence 8777899999998765422 12 346777899999999 999887532 34577778777
Q ss_pred cccceeeeeEEEccCCceEEEEEEeeCCCCCCCc
Q psy19 444 SALWKCRKQIKINMSGMKSFVFILNRTADLFDYA 477 (494)
Q Consensus 444 ~~l~~~~~~~~v~~Ggl~~~i~v~~~~~~~~d~~ 477 (494)
| +.......+. +. .++++..+.......|
T Consensus 172 G--f~~~~~~~~~--~~-~~~~~~~k~~~~~~~~ 200 (219)
T 3dh0_A 172 G--IRVGRVVEVG--KY-CFGVYAMIVKQEEENP 200 (219)
T ss_dssp T--CEEEEEEEET--TT-EEEEEEECC-------
T ss_pred C--CEEEEEEeeC--Cc-eEEEEEEeccccccCc
Confidence 7 4555544332 22 3455555544444433
No 47
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.50 E-value=8.7e-13 Score=127.43 Aligned_cols=143 Identities=9% Similarity=0.041 Sum_probs=105.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC---CCCee
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK---PACVD 386 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~---~~~~D 386 (494)
.++.+|||+|||+|.+++.+|...++..++|+|+++.+++.|++|+..+++ . ++.++++|+.++++. +++||
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~-~v~~~~~d~~~~~~~~~~~~~fD 143 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL----E-NTTFCHDRAETFGQRKDVRESYD 143 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC----S-SEEEEESCHHHHTTCTTTTTCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----C-CEEEEeccHHHhcccccccCCcc
Confidence 467899999999999999998777788999999999999999999998764 2 378999999888653 46899
Q ss_pred EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH--H---HHHHHHHhccccceeeeeEE--EccCC
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR--K---HLIQALHITSALWKCRKQIK--INMSG 459 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~--~---~l~~~l~~~~~l~~~~~~~~--v~~Gg 459 (494)
+|+++.. .+ +..+++.+.++|+|| |++++..+.. . .+.+.+...+ +....... +..+.
T Consensus 144 ~V~~~~~--------~~----~~~~l~~~~~~Lkpg-G~l~~~~g~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~ 208 (240)
T 1xdz_A 144 IVTARAV--------AR----LSVLSELCLPLVKKN-GLFVALKAASAEEELNAGKKAITTLG--GELENIHSFKLPIEE 208 (240)
T ss_dssp EEEEECC--------SC----HHHHHHHHGGGEEEE-EEEEEEECC-CHHHHHHHHHHHHHTT--EEEEEEEEEECTTTC
T ss_pred EEEEecc--------CC----HHHHHHHHHHhcCCC-CEEEEEeCCCchHHHHHHHHHHHHcC--CeEeEEEEEecCCCC
Confidence 9999651 12 457777899999999 9998876432 2 2334455555 34433333 33334
Q ss_pred ceEEEEEEeeCCC
Q psy19 460 MKSFVFILNRTAD 472 (494)
Q Consensus 460 l~~~i~v~~~~~~ 472 (494)
-..+++++++...
T Consensus 209 ~~~~l~~~~k~~~ 221 (240)
T 1xdz_A 209 SDRNIMVIRKIKN 221 (240)
T ss_dssp CEEEEEEEEECSC
T ss_pred CceEEEEEEecCC
Confidence 5567777766443
No 48
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.49 E-value=5e-13 Score=126.54 Aligned_cols=123 Identities=11% Similarity=0.044 Sum_probs=99.4
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.+.+.++....+.++.+|||+|||+|.+++++|.. +..|+|+|+++.+++.|++|++.+++ .+++.++++|
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~----~~~v~~~~~d 112 (204)
T 3njr_A 39 TKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL----SPRMRAVQGT 112 (204)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESC
T ss_pred CcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC----CCCEEEEeCc
Confidence 44566667778888889999999999999999999987 78999999999999999999998765 3357899999
Q ss_pred cccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHH
Q psy19 375 VRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLI 437 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~ 437 (494)
+.+.......||+|++++.. + .. +++++.++|+|| |++++.+.....+.
T Consensus 113 ~~~~~~~~~~~D~v~~~~~~--------~----~~-~l~~~~~~Lkpg-G~lv~~~~~~~~~~ 161 (204)
T 3njr_A 113 APAALADLPLPEAVFIGGGG--------S----QA-LYDRLWEWLAPG-TRIVANAVTLESET 161 (204)
T ss_dssp TTGGGTTSCCCSEEEECSCC--------C----HH-HHHHHHHHSCTT-CEEEEEECSHHHHH
T ss_pred hhhhcccCCCCCEEEECCcc--------c----HH-HHHHHHHhcCCC-cEEEEEecCcccHH
Confidence 98842223579999998732 1 23 667899999999 99999887654443
No 49
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.49 E-value=6.9e-13 Score=128.33 Aligned_cols=128 Identities=16% Similarity=0.142 Sum_probs=106.4
Q ss_pred cccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhc-cCCCCccccee
Q psy19 292 ITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHN-SGNLNRELKVS 369 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~-g~~~~~~~~i~ 369 (494)
..++.+..++.++..+.+.++.+|||+|||+|.+++.++.. .|+..++|+|+++.+++.|++|+..+ |. .++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-----~~v~ 151 (258)
T 2pwy_A 77 ATPTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-----ENVR 151 (258)
T ss_dssp SCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-----CCEE
T ss_pred cccccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-----CCEE
Confidence 45567777788888889999999999999999999999887 66789999999999999999999876 52 3578
Q ss_pred eeeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHH
Q psy19 370 PLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQ 438 (494)
Q Consensus 370 ~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~ 438 (494)
+.++|+.+.++++++||+|++|+|.- ..+++++.++|+|| |+++++++....+.+
T Consensus 152 ~~~~d~~~~~~~~~~~D~v~~~~~~~-------------~~~l~~~~~~L~~g-G~l~~~~~~~~~~~~ 206 (258)
T 2pwy_A 152 FHLGKLEEAELEEAAYDGVALDLMEP-------------WKVLEKAALALKPD-RFLVAYLPNITQVLE 206 (258)
T ss_dssp EEESCGGGCCCCTTCEEEEEEESSCG-------------GGGHHHHHHHEEEE-EEEEEEESCHHHHHH
T ss_pred EEECchhhcCCCCCCcCEEEECCcCH-------------HHHHHHHHHhCCCC-CEEEEEeCCHHHHHH
Confidence 99999998867667899999998721 14556789999999 999999997644443
No 50
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.49 E-value=2.3e-13 Score=141.79 Aligned_cols=118 Identities=15% Similarity=0.046 Sum_probs=92.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC----CCCCe
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF----KPACV 385 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~----~~~~~ 385 (494)
.++.+|||+|||+|++++.+|... ...|+|+|+++.+++.|++|+..+++. ..++.++++|+.++.. ....|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~---~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLD---LSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCC---ccceEEEECCHHHHHHHHHhcCCCC
Confidence 477899999999999999999863 358999999999999999999987640 2357899999987621 13589
Q ss_pred eEEEEcCCCccccC-CccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 386 DGIVTDLPFGKRVG-SKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 386 D~IVtNPPYG~r~~-~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
|+||+||||..... ........|..++..+.++|+|| |.+++.++.
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~ 341 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEG-GILLTFSCS 341 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence 99999999853321 11122244778888999999999 998887764
No 51
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=2.7e-13 Score=134.27 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=89.2
Q ss_pred HhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCe
Q psy19 306 LASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACV 385 (494)
Q Consensus 306 la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~ 385 (494)
+....++.+|||+|||+|++++.+|...+...|+|+|+++.+++.|++|++.+++ .++.++++|+.+++. .+.|
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l-----~~~~~~~~d~~~~~~-~~~~ 187 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL-----NNVIPILADNRDVEL-KDVA 187 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC-----SSEEEEESCGGGCCC-TTCE
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCEEEEECChHHcCc-cCCc
Confidence 4556788999999999999999999986667999999999999999999998875 236799999998733 4689
Q ss_pred eEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 386 DGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 386 D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
|+|++|||++ +..++..+.+.|+|| |.+++.+.
T Consensus 188 D~Vi~d~p~~------------~~~~l~~~~~~Lkpg-G~l~~s~~ 220 (272)
T 3a27_A 188 DRVIMGYVHK------------THKFLDKTFEFLKDR-GVIHYHET 220 (272)
T ss_dssp EEEEECCCSS------------GGGGHHHHHHHEEEE-EEEEEEEE
T ss_pred eEEEECCccc------------HHHHHHHHHHHcCCC-CEEEEEEc
Confidence 9999999972 224556788899999 98887544
No 52
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.48 E-value=1.2e-12 Score=120.14 Aligned_cols=143 Identities=15% Similarity=0.115 Sum_probs=97.6
Q ss_pred cccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCccccee
Q psy19 290 FNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVS 369 (494)
Q Consensus 290 ~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~ 369 (494)
+.|.+..+.++.. +.... .++.+|||+|||+|.+++.++.. + .++|+|+++.|++. . .++.
T Consensus 4 ~~P~~~~~~l~~~-l~~~~-~~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~------~--------~~~~ 64 (170)
T 3q87_B 4 YEPGEDTYTLMDA-LEREG-LEMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES------H--------RGGN 64 (170)
T ss_dssp CCCCHHHHHHHHH-HHHHT-CCSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT------C--------SSSC
T ss_pred cCcCccHHHHHHH-HHhhc-CCCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc------c--------cCCe
Confidence 3466666666666 33322 35679999999999999999887 3 99999999999987 1 1357
Q ss_pred eeeeccccccCCCCCeeEEEEcCCCccccCC-----ccchHHHHHHHHHHHhhcccCCCcEEEEEecC---HHHHHHHHH
Q psy19 370 PLVCNVRQLCFKPACVDGIVTDLPFGKRVGS-----KSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD---RKHLIQALH 441 (494)
Q Consensus 370 ~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~-----~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~---~~~l~~~l~ 441 (494)
++++|+.+ ++++++||+|++||||...... ..+...++. ++.+.| || |+++++.+. ...+.+.+.
T Consensus 65 ~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l-pg-G~l~~~~~~~~~~~~l~~~l~ 137 (170)
T 3q87_B 65 LVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVID----RFVDAV-TV-GMLYLLVIEANRPKEVLARLE 137 (170)
T ss_dssp EEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHH----HHHHHC-CS-SEEEEEEEGGGCHHHHHHHHH
T ss_pred EEECChhh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHH----HHHhhC-CC-CEEEEEEecCCCHHHHHHHHH
Confidence 89999987 4555799999999999742211 112233444 466666 98 999987653 344666677
Q ss_pred hccccceeeeeEEEccCCc
Q psy19 442 ITSALWKCRKQIKINMSGM 460 (494)
Q Consensus 442 ~~~~l~~~~~~~~v~~Ggl 460 (494)
+.| |..........|--
T Consensus 138 ~~g--f~~~~~~~~~~~~e 154 (170)
T 3q87_B 138 ERG--YGTRILKVRKILGE 154 (170)
T ss_dssp HTT--CEEEEEEEEECSSS
T ss_pred HCC--CcEEEEEeeccCCc
Confidence 666 45555444444433
No 53
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.48 E-value=6.4e-14 Score=126.63 Aligned_cols=125 Identities=15% Similarity=0.101 Sum_probs=92.7
Q ss_pred ccchHHHHHHHHHHhCC--CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceee
Q psy19 293 TTLKPTIAYNMVRLASP--IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSP 370 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~--~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~ 370 (494)
.|..+.+...++..... .++.+|||+|||+|.+++.++... ..++|+|+++.+++.|++|+..+++ ++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~ 92 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTGL------GARV 92 (171)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHTC------CCEE
T ss_pred CCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcCC------ceEE
Confidence 44556666666665543 267899999999999999999874 4599999999999999999997753 4678
Q ss_pred eeeccccc-c-CC--CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 371 LVCNVRQL-C-FK--PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 371 ~~~Da~~l-~-~~--~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
.++|+.+. + .. .++||+|++||||. . . ...++..+.+ .++|+|| |.+++.++...
T Consensus 93 ~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~--~---~~~~~~~~~~--~~~L~~g-G~~~~~~~~~~ 151 (171)
T 1ws6_A 93 VALPVEVFLPEAKAQGERFTVAFMAPPYA-M--D---LAALFGELLA--SGLVEAG-GLYVLQHPKDL 151 (171)
T ss_dssp ECSCHHHHHHHHHHTTCCEEEEEECCCTT-S--C---TTHHHHHHHH--HTCEEEE-EEEEEEEETTS
T ss_pred EeccHHHHHHhhhccCCceEEEEECCCCc-h--h---HHHHHHHHHh--hcccCCC-cEEEEEeCCcc
Confidence 99998874 2 11 24799999999997 2 1 1222332222 4999999 99988877654
No 54
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.48 E-value=6e-13 Score=124.49 Aligned_cols=152 Identities=20% Similarity=0.237 Sum_probs=109.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|.+++.++...+ ..++|+|+++.+++.|++++.. ...+.+.++|+.++++++++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~-------~~~i~~~~~d~~~~~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH-------VPQLRWETMDVRKLDFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT-------CTTCEEEECCTTSCCSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc-------CCCcEEEEcchhcCCCCCCcccEEE
Confidence 5778999999999999999988743 2899999999999999999863 1246889999998887778999999
Q ss_pred EcCCCccccCCc-------cchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHH-HHhccccceeeeeEEEccCCce
Q psy19 390 TDLPFGKRVGSK-------SNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQA-LHITSALWKCRKQIKINMSGMK 461 (494)
Q Consensus 390 tNPPYG~r~~~~-------~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~-l~~~~~l~~~~~~~~v~~Ggl~ 461 (494)
+++|+..-.... .........+++++.++|+|| |+++++++....+... +...+..|.. .......+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 189 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTSAAPHFRTRHYAQAYYGWSL--RHATYGSGFH 189 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEESCCHHHHHHHHCCGGGCEEE--EEEEESGGGC
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeCCCcHHHHHHHhccccCcEE--EEEEecCcce
Confidence 999875332110 012334567888999999999 9999998876444433 3333322332 2222345666
Q ss_pred EEEEEEeeCCC
Q psy19 462 SFVFILNRTAD 472 (494)
Q Consensus 462 ~~i~v~~~~~~ 472 (494)
.++|+.++...
T Consensus 190 ~~~~~~~~~~~ 200 (215)
T 2pxx_A 190 FHLYLMHKGGK 200 (215)
T ss_dssp EEEEEEEETCC
T ss_pred EEEEEEEeCCC
Confidence 77888877543
No 55
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.48 E-value=3.1e-13 Score=126.65 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=103.2
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.++.+.++..++......++ +|||+|||+|.++..++.. ++..++|+|+++.+++.|+.++...++ ..++.+.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~----~~~~~~~~ 99 (219)
T 3dlc_A 26 APIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANL----NDRIQIVQ 99 (219)
T ss_dssp TTHHHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEE
T ss_pred ccccHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccc----cCceEEEE
Confidence 45677888888888887777 9999999999999999887 678999999999999999999998764 34678999
Q ss_pred eccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+|+.++++++++||+|+++..+..- .+ ...+++++.++|+|| |++++..
T Consensus 100 ~d~~~~~~~~~~~D~v~~~~~l~~~----~~----~~~~l~~~~~~L~pg-G~l~~~~ 148 (219)
T 3dlc_A 100 GDVHNIPIEDNYADLIVSRGSVFFW----ED----VATAFREIYRILKSG-GKTYIGG 148 (219)
T ss_dssp CBTTBCSSCTTCEEEEEEESCGGGC----SC----HHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cCHHHCCCCcccccEEEECchHhhc----cC----HHHHHHHHHHhCCCC-CEEEEEe
Confidence 9999998877899999999875432 12 345777899999999 9988863
No 56
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.48 E-value=4.3e-13 Score=129.63 Aligned_cols=125 Identities=10% Similarity=0.002 Sum_probs=103.1
Q ss_pred cccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee
Q psy19 292 ITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL 371 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~ 371 (494)
..|..+..+..++..+...++.+|||+|||+|.+++.++... +..++|+|+++.+++.|++++...|+ ..++.+.
T Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~----~~~v~~~ 91 (256)
T 1nkv_A 17 HNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV----SERVHFI 91 (256)
T ss_dssp SSSCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEE
T ss_pred cCCCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC----CcceEEE
Confidence 556778888889999888899999999999999999988765 57899999999999999999997764 3467899
Q ss_pred eeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 372 VCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 372 ~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++|+.++++ +++||+|++...... .. + ...+++++.++|||| |++++..+
T Consensus 92 ~~d~~~~~~-~~~fD~V~~~~~~~~-~~---~----~~~~l~~~~r~Lkpg-G~l~~~~~ 141 (256)
T 1nkv_A 92 HNDAAGYVA-NEKCDVAACVGATWI-AG---G----FAGAEELLAQSLKPG-GIMLIGEP 141 (256)
T ss_dssp ESCCTTCCC-SSCEEEEEEESCGGG-TS---S----SHHHHHHHTTSEEEE-EEEEEEEE
T ss_pred ECChHhCCc-CCCCCEEEECCChHh-cC---C----HHHHHHHHHHHcCCC-eEEEEecC
Confidence 999999877 679999999654321 11 2 246777899999999 99988653
No 57
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.48 E-value=4.8e-13 Score=132.01 Aligned_cols=123 Identities=14% Similarity=0.119 Sum_probs=103.1
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL 371 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~ 371 (494)
..+.+..++.++..+.+.++.+|||+|||+|.+++.++.. .|+..++|+|+++.+++.|++|+..+++ ..++.+.
T Consensus 94 ~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~v~~~ 169 (277)
T 1o54_A 94 QIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL----IERVTIK 169 (277)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC----GGGEEEE
T ss_pred CccCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC----CCCEEEE
Confidence 4466677778888889999999999999999999999987 6678999999999999999999997754 3467899
Q ss_pred eeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 372 VCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 372 ~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
++|+.+. +++++||+|++|||+.. .+++.+.++|+|| |++++.++...
T Consensus 170 ~~d~~~~-~~~~~~D~V~~~~~~~~-------------~~l~~~~~~L~pg-G~l~~~~~~~~ 217 (277)
T 1o54_A 170 VRDISEG-FDEKDVDALFLDVPDPW-------------NYIDKCWEALKGG-GRFATVCPTTN 217 (277)
T ss_dssp CCCGGGC-CSCCSEEEEEECCSCGG-------------GTHHHHHHHEEEE-EEEEEEESSHH
T ss_pred ECCHHHc-ccCCccCEEEECCcCHH-------------HHHHHHHHHcCCC-CEEEEEeCCHH
Confidence 9999886 55568999999998531 3455788899999 99999998653
No 58
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.47 E-value=4.5e-13 Score=130.92 Aligned_cols=124 Identities=14% Similarity=0.092 Sum_probs=101.6
Q ss_pred ccchHHHHHHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee
Q psy19 293 TTLKPTIAYNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL 371 (494)
Q Consensus 293 a~L~e~lAa~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~ 371 (494)
.|..+.....++.+.. ..++.+|||+|||+|.+++.++.. +.+.++|+|+++.+++.|++++...++ ..++.+.
T Consensus 27 ~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~ 101 (267)
T 3kkz_A 27 GPGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL----QNRVTGI 101 (267)
T ss_dssp SSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEE
T ss_pred CCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC----CcCcEEE
Confidence 3445555666666554 678899999999999999999887 567999999999999999999998764 4568999
Q ss_pred eeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 372 VCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 372 ~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++|+.++++++++||+|+++.++..- + ...+++++.++|+|| |++++.++
T Consensus 102 ~~d~~~~~~~~~~fD~i~~~~~~~~~-----~----~~~~l~~~~~~Lkpg-G~l~~~~~ 151 (267)
T 3kkz_A 102 VGSMDDLPFRNEELDLIWSEGAIYNI-----G----FERGLNEWRKYLKKG-GYLAVSEC 151 (267)
T ss_dssp ECCTTSCCCCTTCEEEEEESSCGGGT-----C----HHHHHHHHGGGEEEE-EEEEEEEE
T ss_pred EcChhhCCCCCCCEEEEEEcCCceec-----C----HHHHHHHHHHHcCCC-CEEEEEEe
Confidence 99999988777899999999876432 1 356778999999999 99988754
No 59
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.47 E-value=7e-14 Score=138.45 Aligned_cols=123 Identities=14% Similarity=0.111 Sum_probs=96.3
Q ss_pred HHHhCCCCCCEEEEEcCCcChHHHHHHhcCCC-CeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--
Q psy19 304 VRLASPIPGDVFLDPMCGGGTIPVECSLSYPH-TFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-- 380 (494)
Q Consensus 304 l~la~~~~g~~VLDP~CGSGtilIEAA~~~~~-~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-- 380 (494)
..+..+.++.+|||+|||+|++++.+|...++ ..|+|+|+++.+++.+++|++.+|+ .++.++++|+..++.
T Consensus 76 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~-----~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 76 PIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV-----LNTIIINADMRKYKDYL 150 (274)
T ss_dssp HHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCHHHHHHHH
T ss_pred HHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC-----CcEEEEeCChHhcchhh
Confidence 34557788999999999999999998876555 7999999999999999999998775 257899999988753
Q ss_pred --CCCCeeEEEEcCCCccc-c-C--------CccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 381 --KPACVDGIVTDLPFGKR-V-G--------SKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 381 --~~~~~D~IVtNPPYG~r-~-~--------~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
..+.||+|++||||... . . ....+...+..+++.+.++|||| |++++.|+.
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~stcs 213 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYSTCS 213 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEECC
Confidence 24689999999998421 0 0 00112234678889999999999 999998763
No 60
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=6.8e-13 Score=120.77 Aligned_cols=129 Identities=14% Similarity=0.076 Sum_probs=103.7
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.+..+.++..++......++.+|||+|||+|.+++.++. ++..++|+|+++.+++.|++|+..+++ .++.+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~ 89 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNI-----KNCQIIK 89 (183)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTC-----CSEEEEE
T ss_pred CcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCC-----CcEEEEE
Confidence 367788888888888888889999999999999999887 578999999999999999999998764 3478999
Q ss_pred eccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHH---HHHHHhcc
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHL---IQALHITS 444 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l---~~~l~~~~ 444 (494)
+|+.+ ++++++||+|++++| .+ +..+++.+.++ || |.+++.++....+ .+.+...+
T Consensus 90 ~d~~~-~~~~~~~D~i~~~~~--------~~----~~~~l~~~~~~--~g-G~l~~~~~~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 90 GRAED-VLDKLEFNKAFIGGT--------KN----IEKIIEILDKK--KI-NHIVANTIVLENAAKIINEFESRG 148 (183)
T ss_dssp SCHHH-HGGGCCCSEEEECSC--------SC----HHHHHHHHHHT--TC-CEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCccc-cccCCCCcEEEECCc--------cc----HHHHHHHHhhC--CC-CEEEEEecccccHHHHHHHHHHcC
Confidence 99987 555578999999998 12 34566678777 88 9999988765433 33444444
No 61
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.46 E-value=2.5e-13 Score=137.37 Aligned_cols=125 Identities=16% Similarity=0.098 Sum_probs=98.6
Q ss_pred HHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC
Q psy19 302 NMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF 380 (494)
Q Consensus 302 ~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~ 380 (494)
.++.+..+.++.+|||+|||+|..++.+|...+ ...|+|+|+++.+++.+++|+..+|+ .++.++++|+..++.
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~-----~~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV-----LNVILFHSSSLHIGE 183 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC-----CSEEEESSCGGGGGG
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC-----CeEEEEECChhhccc
Confidence 344556788999999999999999999887653 47999999999999999999998875 247899999998764
Q ss_pred CCCCeeEEEEcCCCcc-c-cCCc------------cchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 381 KPACVDGIVTDLPFGK-R-VGSK------------SNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~-r-~~~~------------~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
..+.||+|++|||+.. . +... ..+..++..++.++.++|||| |++++.|+.
T Consensus 184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~stcs 248 (315)
T 1ixk_A 184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTCS 248 (315)
T ss_dssp GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEeCC
Confidence 4468999999999621 1 1000 123455678999999999999 999997763
No 62
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.46 E-value=1.3e-12 Score=128.44 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=106.4
Q ss_pred cccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhc-cCCCCccccee
Q psy19 292 ITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHN-SGNLNRELKVS 369 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~-g~~~~~~~~i~ 369 (494)
...+.+..++.++..+.+.++.+|||+|||+|.+++.++.. .++..++|+|+++.+++.|++|+..+ |. +..++.
T Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~---~~~~v~ 156 (280)
T 1i9g_A 80 PQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ---PPDNWR 156 (280)
T ss_dssp SCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS---CCTTEE
T ss_pred ceeecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC---CCCcEE
Confidence 34567777888888889999999999999999999998874 56789999999999999999999876 40 124578
Q ss_pred eeeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHH
Q psy19 370 PLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQA 439 (494)
Q Consensus 370 ~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~ 439 (494)
+.++|+.+.++++++||+|++|+|-. ..+++++.++|+|| |++++.++....+.+.
T Consensus 157 ~~~~d~~~~~~~~~~~D~v~~~~~~~-------------~~~l~~~~~~L~pg-G~l~~~~~~~~~~~~~ 212 (280)
T 1i9g_A 157 LVVSDLADSELPDGSVDRAVLDMLAP-------------WEVLDAVSRLLVAG-GVLMVYVATVTQLSRI 212 (280)
T ss_dssp EECSCGGGCCCCTTCEEEEEEESSCG-------------GGGHHHHHHHEEEE-EEEEEEESSHHHHHHH
T ss_pred EEECchHhcCCCCCceeEEEECCcCH-------------HHHHHHHHHhCCCC-CEEEEEeCCHHHHHHH
Confidence 99999998876667899999998721 14566789999999 9999999876544443
No 63
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.46 E-value=7.9e-13 Score=121.06 Aligned_cols=133 Identities=19% Similarity=0.164 Sum_probs=107.1
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.+..+.++..++......++.+|||+|||+|.+++.++... ..++|+|+++.+++.|++|+..++. ..++.+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~----~~~~~~~~ 88 (192)
T 1l3i_A 15 GPTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGL----GDNVTLME 88 (192)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTC----CTTEEEEE
T ss_pred CCChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCC----CcceEEEe
Confidence 36788889999998888899999999999999999998874 7999999999999999999997754 34578899
Q ss_pred eccccccCCC-CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHH---HHHHHHhcc
Q psy19 373 CNVRQLCFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKH---LIQALHITS 444 (494)
Q Consensus 373 ~Da~~l~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~---l~~~l~~~~ 444 (494)
+|+.+ +++. +.||+|++++|+. + +..+++.+.++|+|| |.+++.++.... +.+.+.+.+
T Consensus 89 ~d~~~-~~~~~~~~D~v~~~~~~~-------~----~~~~l~~~~~~l~~g-G~l~~~~~~~~~~~~~~~~l~~~g 151 (192)
T 1l3i_A 89 GDAPE-ALCKIPDIDIAVVGGSGG-------E----LQEILRIIKDKLKPG-GRIIVTAILLETKFEAMECLRDLG 151 (192)
T ss_dssp SCHHH-HHTTSCCEEEEEESCCTT-------C----HHHHHHHHHHTEEEE-EEEEEEECBHHHHHHHHHHHHHTT
T ss_pred cCHHH-hcccCCCCCEEEECCchH-------H----HHHHHHHHHHhcCCC-cEEEEEecCcchHHHHHHHHHHCC
Confidence 99877 2222 5899999998763 1 356777899999999 999998876533 344455554
No 64
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.45 E-value=6.5e-13 Score=131.13 Aligned_cols=126 Identities=13% Similarity=0.120 Sum_probs=93.3
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhc-cCCCCcccceee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHN-SGNLNRELKVSP 370 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~-g~~~~~~~~i~~ 370 (494)
..+.+..+..++..+.+.++.+|||+|||+|.+++.++.. .++..++|+|+++.+++.|++|+..+ |. .++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-----~~v~~ 166 (275)
T 1yb2_A 92 QIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-----GNVRT 166 (275)
T ss_dssp --------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-----TTEEE
T ss_pred cccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-----CcEEE
Confidence 3455555667777888889999999999999999999876 67789999999999999999999876 52 35789
Q ss_pred eeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHH
Q psy19 371 LVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQ 438 (494)
Q Consensus 371 ~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~ 438 (494)
.++|+.+ ++++++||+|++|+|-. ..+++++.++|+|| |++++.++......+
T Consensus 167 ~~~d~~~-~~~~~~fD~Vi~~~~~~-------------~~~l~~~~~~Lkpg-G~l~i~~~~~~~~~~ 219 (275)
T 1yb2_A 167 SRSDIAD-FISDQMYDAVIADIPDP-------------WNHVQKIASMMKPG-SVATFYLPNFDQSEK 219 (275)
T ss_dssp ECSCTTT-CCCSCCEEEEEECCSCG-------------GGSHHHHHHTEEEE-EEEEEEESSHHHHHH
T ss_pred EECchhc-cCcCCCccEEEEcCcCH-------------HHHHHHHHHHcCCC-CEEEEEeCCHHHHHH
Confidence 9999987 45557899999998822 14556789999999 999999998643333
No 65
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.45 E-value=3.1e-13 Score=140.82 Aligned_cols=125 Identities=10% Similarity=-0.034 Sum_probs=99.7
Q ss_pred cccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHh-------ccCCCCc
Q psy19 292 ITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLH-------NSGNLNR 364 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~-------~g~~~~~ 364 (494)
-+++.+.....|+..+.+.++++|||+|||+|.+++.+|...+...++|+|+++.+++.|++|++. +|+.
T Consensus 154 YGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~--- 230 (438)
T 3uwp_A 154 YGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK--- 230 (438)
T ss_dssp GGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC---
T ss_pred cCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC---
Confidence 456778888889999999999999999999999999999876545699999999999999988642 3321
Q ss_pred ccceeeeeeccccccCCC--CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 365 ELKVSPLVCNVRQLCFKP--ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 365 ~~~i~~~~~Da~~l~~~~--~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
..++.++++|+.++++.+ ..+|+|++|++|.. .+ ....|.++.++|||| |+++++
T Consensus 231 ~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~-----pd----l~~aL~Ei~RvLKPG-GrIVss 287 (438)
T 3uwp_A 231 HAEYTLERGDFLSEEWRERIANTSVIFVNNFAFG-----PE----VDHQLKERFANMKEG-GRIVSS 287 (438)
T ss_dssp CCEEEEEECCTTSHHHHHHHHTCSEEEECCTTCC-----HH----HHHHHHHHHTTSCTT-CEEEES
T ss_pred CCCeEEEECcccCCccccccCCccEEEEcccccC-----ch----HHHHHHHHHHcCCCC-cEEEEe
Confidence 256899999999987643 37999999998731 12 234455788999999 998764
No 66
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.45 E-value=1.2e-12 Score=135.21 Aligned_cols=121 Identities=14% Similarity=0.035 Sum_probs=94.5
Q ss_pred chHHHHHHHHHHh--CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 295 LKPTIAYNMVRLA--SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 295 L~e~lAa~ll~la--~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
..+.++..++.+. ...++.+|||+| |+|.++++++...+...|+|+|+++.+++.|++|+..+|+ . ++.+++
T Consensus 154 ~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~----~-~v~~~~ 227 (373)
T 2qm3_A 154 TPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY----E-DIEIFT 227 (373)
T ss_dssp CHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC----C-CEEEEC
T ss_pred CHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----C-CEEEEE
Confidence 4444554444332 234678999999 9999999999887667999999999999999999998875 2 578999
Q ss_pred ecccc-ccC-CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEE-EEEec
Q psy19 373 CNVRQ-LCF-KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRA-ILLTS 431 (494)
Q Consensus 373 ~Da~~-l~~-~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~l-vllt~ 431 (494)
+|+.+ ++. .+++||+|++||||+.. . ...|+.++.++|+|| |++ ++.+.
T Consensus 228 ~D~~~~l~~~~~~~fD~Vi~~~p~~~~-----~----~~~~l~~~~~~Lkpg-G~~~~~~~~ 279 (373)
T 2qm3_A 228 FDLRKPLPDYALHKFDTFITDPPETLE-----A----IRAFVGRGIATLKGP-RCAGYFGIT 279 (373)
T ss_dssp CCTTSCCCTTTSSCBSEEEECCCSSHH-----H----HHHHHHHHHHTBCST-TCEEEEEEC
T ss_pred ChhhhhchhhccCCccEEEECCCCchH-----H----HHHHHHHHHHHcccC-CeEEEEEEe
Confidence 99998 653 34689999999999853 1 367888999999999 954 44443
No 67
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.45 E-value=8.4e-13 Score=127.64 Aligned_cols=123 Identities=13% Similarity=0.072 Sum_probs=100.1
Q ss_pred cchHHHHHHHHHHh-CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 294 TLKPTIAYNMVRLA-SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 294 ~L~e~lAa~ll~la-~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
|..+.+...++.+. ...++.+|||+|||+|.+++.++...+ ..++|+|+++.+++.|++|+..+++ ..++.+.+
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~ 102 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANC----ADRVKGIT 102 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEE
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCC----CCceEEEE
Confidence 34455555555554 567888999999999999999998875 4999999999999999999998765 45678999
Q ss_pred eccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+|+..+++++++||+|+++..+..- + ...+++++.++|+|| |++++..+
T Consensus 103 ~d~~~~~~~~~~fD~v~~~~~l~~~-----~----~~~~l~~~~~~L~pg-G~l~~~~~ 151 (257)
T 3f4k_A 103 GSMDNLPFQNEELDLIWSEGAIYNI-----G----FERGMNEWSKYLKKG-GFIAVSEA 151 (257)
T ss_dssp CCTTSCSSCTTCEEEEEEESCSCCC-----C----HHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred CChhhCCCCCCCEEEEEecChHhhc-----C----HHHHHHHHHHHcCCC-cEEEEEEe
Confidence 9999988877899999998765422 2 346778999999999 99998763
No 68
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.45 E-value=4.7e-13 Score=138.24 Aligned_cols=124 Identities=16% Similarity=0.221 Sum_probs=95.4
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.+...++.++... +..|||+|||+|++++.+|.. ...|+|+|+++.|++.|++|++.+|+ .++.++++|
T Consensus 198 ~~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~-----~~v~~~~~d 269 (369)
T 3bt7_A 198 MNIQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHI-----DNVQIIRMA 269 (369)
T ss_dssp HHHHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTC-----CSEEEECCC
T ss_pred HHHHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEECC
Confidence 4466666677766654 578999999999999988875 46899999999999999999998875 257899999
Q ss_pred ccccc--CCC--------------CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHH
Q psy19 375 VRQLC--FKP--------------ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQ 438 (494)
Q Consensus 375 a~~l~--~~~--------------~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~ 438 (494)
+.++. +.. ..||+||+|||+. +.. . ++.+.|+++ |+++++++++..+.+
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~---g~~-------~----~~~~~l~~~-g~ivyvsc~p~t~ar 334 (369)
T 3bt7_A 270 AEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS---GLD-------S----ETEKMVQAY-PRILYISCNPETLCK 334 (369)
T ss_dssp SHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT---CCC-------H----HHHHHHTTS-SEEEEEESCHHHHHH
T ss_pred HHHHHHHHhhccccccccccccccCCCCEEEECcCcc---ccH-------H----HHHHHHhCC-CEEEEEECCHHHHHH
Confidence 87752 221 2799999999975 211 1 345566788 999999999876665
Q ss_pred HHH
Q psy19 439 ALH 441 (494)
Q Consensus 439 ~l~ 441 (494)
.+.
T Consensus 335 d~~ 337 (369)
T 3bt7_A 335 NLE 337 (369)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 69
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.45 E-value=1.9e-12 Score=126.74 Aligned_cols=142 Identities=15% Similarity=0.091 Sum_probs=106.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC---CCCee
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK---PACVD 386 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~---~~~~D 386 (494)
.++.+|||+|||+|.+++.+|..+|+..|+|+|+++.+++.|++|+..+++ . ++.++++|+.+++.. .++||
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l----~-~v~~~~~d~~~~~~~~~~~~~fD 153 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL----K-GARALWGRAEVLAREAGHREAYA 153 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC----S-SEEEEECCHHHHTTSTTTTTCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC----C-ceEEEECcHHHhhcccccCCCce
Confidence 467899999999999999999888889999999999999999999998875 2 378999999988642 36899
Q ss_pred EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC--H---HHHHHHHHhccccceeeeeEEEccC--C
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD--R---KHLIQALHITSALWKCRKQIKINMS--G 459 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~--~---~~l~~~l~~~~~l~~~~~~~~v~~G--g 459 (494)
+|+++- . .+ +..+++.+.++|+|| |+++++.+. . ..+...+...| +...+...+... .
T Consensus 154 ~I~s~a-----~---~~----~~~ll~~~~~~Lkpg-G~l~~~~g~~~~~e~~~~~~~l~~~G--~~~~~~~~~~~p~~~ 218 (249)
T 3g89_A 154 RAVARA-----V---AP----LCVLSELLLPFLEVG-GAAVAMKGPRVEEELAPLPPALERLG--GRLGEVLALQLPLSG 218 (249)
T ss_dssp EEEEES-----S---CC----HHHHHHHHGGGEEEE-EEEEEEECSCCHHHHTTHHHHHHHHT--EEEEEEEEEECTTTC
T ss_pred EEEECC-----c---CC----HHHHHHHHHHHcCCC-eEEEEEeCCCcHHHHHHHHHHHHHcC--CeEEEEEEeeCCCCC
Confidence 999952 1 12 346777899999999 999987752 1 22444555555 344444444333 3
Q ss_pred ceEEEEEEeeCC
Q psy19 460 MKSFVFILNRTA 471 (494)
Q Consensus 460 l~~~i~v~~~~~ 471 (494)
-.+++.++++..
T Consensus 219 ~~R~l~~~~k~~ 230 (249)
T 3g89_A 219 EARHLVVLEKTA 230 (249)
T ss_dssp CEEEEEEEEECS
T ss_pred CcEEEEEEEeCC
Confidence 466777777644
No 70
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.44 E-value=8.9e-13 Score=130.03 Aligned_cols=108 Identities=13% Similarity=0.173 Sum_probs=86.4
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCee
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVD 386 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D 386 (494)
.++|.+|||+|||+|.+++.++..+ ++++|+|+|+++.|++.|++++...+. ..+++++++|+.++++ +.+|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~----~~~v~~~~~D~~~~~~--~~~d 141 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA----PTPVDVIEGDIRDIAI--ENAS 141 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC----SSCEEEEESCTTTCCC--CSEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc----CceEEEeecccccccc--cccc
Confidence 5789999999999999999988764 567999999999999999999987654 4568999999999876 4699
Q ss_pred EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+|+++--. ..-.. .-...+|+++.++|||| |++++.
T Consensus 142 ~v~~~~~l--~~~~~----~~~~~~l~~i~~~LkpG-G~lii~ 177 (261)
T 4gek_A 142 MVVLNFTL--QFLEP----SERQALLDKIYQGLNPG-GALVLS 177 (261)
T ss_dssp EEEEESCG--GGSCH----HHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cceeeeee--eecCc----hhHhHHHHHHHHHcCCC-cEEEEE
Confidence 99997421 11111 11345778999999999 998875
No 71
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.44 E-value=6.5e-13 Score=135.65 Aligned_cols=123 Identities=15% Similarity=0.186 Sum_probs=98.4
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
.+..++....+.++.+|||+|||+|.+++.++..++...++|+|+++.+++.|++|+..+++. +.+..+|+...
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~------~~~~~~d~~~~ 257 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE------GEVFASNVFSE 257 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC------CEEEECSTTTT
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC------CEEEEcccccc
Confidence 355566666556677999999999999999999887789999999999999999999987642 35678888765
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
+ +++||+|++||||..... ........+++++.++|+|| |.++++++..
T Consensus 258 ~--~~~fD~Iv~~~~~~~g~~---~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~ 306 (343)
T 2pjd_A 258 V--KGRFDMIISNPPFHDGMQ---TSLDAAQTLIRGAVRHLNSG-GELRIVANAF 306 (343)
T ss_dssp C--CSCEEEEEECCCCCSSSH---HHHHHHHHHHHHHGGGEEEE-EEEEEEEETT
T ss_pred c--cCCeeEEEECCCcccCcc---CCHHHHHHHHHHHHHhCCCC-cEEEEEEcCC
Confidence 3 468999999999864221 12334678889999999999 9999987753
No 72
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.43 E-value=2.9e-12 Score=120.11 Aligned_cols=117 Identities=21% Similarity=0.254 Sum_probs=87.9
Q ss_pred cchHHHHHHHHHHh---CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceee
Q psy19 294 TLKPTIAYNMVRLA---SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSP 370 (494)
Q Consensus 294 ~L~e~lAa~ll~la---~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~ 370 (494)
+..+.++..++..+ ...++.+|||+|||+|.+++.++... ...++|+|+++.+++.|+.|+..+++ ++.+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~ 101 (207)
T 1wy7_A 29 RTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKG------KFKV 101 (207)
T ss_dssp CCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTT------SEEE
T ss_pred cCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC------CEEE
Confidence 34555666655544 35578899999999999999998873 24799999999999999999987653 4689
Q ss_pred eeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 371 LVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 371 ~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+++|+.+++ .+||+|++||||+..... . ...+++.+.+++ | +.+++.
T Consensus 102 ~~~d~~~~~---~~~D~v~~~~p~~~~~~~--~----~~~~l~~~~~~l--~-~~~~~~ 148 (207)
T 1wy7_A 102 FIGDVSEFN---SRVDIVIMNPPFGSQRKH--A----DRPFLLKAFEIS--D-VVYSIH 148 (207)
T ss_dssp EESCGGGCC---CCCSEEEECCCCSSSSTT--T----THHHHHHHHHHC--S-EEEEEE
T ss_pred EECchHHcC---CCCCEEEEcCCCccccCC--c----hHHHHHHHHHhc--C-cEEEEE
Confidence 999999864 489999999999865421 1 235566777777 5 644333
No 73
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.43 E-value=4.6e-13 Score=126.68 Aligned_cols=133 Identities=11% Similarity=-0.023 Sum_probs=102.3
Q ss_pred cccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee
Q psy19 292 ITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL 371 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~ 371 (494)
|.++.+.....++.+....++.+|||+|||+|.++..++..++...++|+|+++.+++.|++|+..+++......++.+.
T Consensus 10 p~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (217)
T 3jwh_A 10 PISLNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLI 89 (217)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEE
T ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEE
Confidence 55678888888888877678889999999999999999988776899999999999999999998765421111267899
Q ss_pred eeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 372 VCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 372 ~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
++|+...+...++||+|+++-.+.. + . ...+..+++++.++|+|| |. ++++++
T Consensus 90 ~~d~~~~~~~~~~fD~v~~~~~l~~-~-~----~~~~~~~l~~~~~~Lkpg-G~-li~~~~ 142 (217)
T 3jwh_A 90 QGALTYQDKRFHGYDAATVIEVIEH-L-D----LSRLGAFERVLFEFAQPK-IV-IVTTPN 142 (217)
T ss_dssp ECCTTSCCGGGCSCSEEEEESCGGG-C-C----HHHHHHHHHHHHTTTCCS-EE-EEEEEB
T ss_pred eCCcccccccCCCcCEEeeHHHHHc-C-C----HHHHHHHHHHHHHHcCCC-EE-EEEccC
Confidence 9999776665578999999765432 1 1 123457888999999999 94 444444
No 74
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.43 E-value=4.5e-12 Score=122.83 Aligned_cols=145 Identities=12% Similarity=0.046 Sum_probs=108.9
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
..+|.+|+|+|||||.+++.+|...+...|+|+|+++.+++.|++|++.+|+ .+++.+.++|..+...+...||+|
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl----~~~I~~~~gD~l~~~~~~~~~D~I 94 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL----TSKIDVRLANGLSAFEEADNIDTI 94 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECchhhccccccccCEE
Confidence 3578899999999999999999987777899999999999999999998875 457899999998875433379987
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec-CHHHHHHHHHhccccceeeeeEEEccCCceEEEEEE
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS-DRKHLIQALHITSALWKCRKQIKINMSGMKSFVFIL 467 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~-~~~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~~i~v~ 467 (494)
+. ..++ ..+...++....+.|+++ |++++-.. +...+.+.+...| |.......+..++..-.|.+.
T Consensus 95 vi-----aGmG-----g~lI~~IL~~~~~~l~~~-~~lIlqp~~~~~~lr~~L~~~G--f~i~~E~lv~e~~~~Yeii~~ 161 (230)
T 3lec_A 95 TI-----CGMG-----GRLIADILNNDIDKLQHV-KTLVLQPNNREDDLRKWLAAND--FEIVAEDILTENDKRYEILVV 161 (230)
T ss_dssp EE-----EEEC-----HHHHHHHHHHTGGGGTTC-CEEEEEESSCHHHHHHHHHHTT--EEEEEEEEEEC--CEEEEEEE
T ss_pred EE-----eCCc-----hHHHHHHHHHHHHHhCcC-CEEEEECCCChHHHHHHHHHCC--CEEEEEEEEEECCEEEEEEEE
Confidence 64 0222 345677888999999988 87665432 3455777788777 677776666655554455555
Q ss_pred eeC
Q psy19 468 NRT 470 (494)
Q Consensus 468 ~~~ 470 (494)
.+.
T Consensus 162 ~~~ 164 (230)
T 3lec_A 162 KHG 164 (230)
T ss_dssp EEC
T ss_pred EeC
Confidence 553
No 75
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.43 E-value=7.2e-13 Score=127.57 Aligned_cols=118 Identities=14% Similarity=0.030 Sum_probs=97.9
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
+.+..++.+..++...++.+|||+|||+|.+++.+|...++..++|+|+++.+++.|++|+..+++ ..++.++++|
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d 130 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF----ENQVRIIEGN 130 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC----TTTEEEEESC
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECC
Confidence 456777777777766678899999999999999999877789999999999999999999998765 3568999999
Q ss_pred cccc-c-CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 375 VRQL-C-FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 375 a~~l-~-~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
+.+. + ..+++||+|++|.+.. . |..+++.+.++|+|| |.+++
T Consensus 131 ~~~~~~~~~~~~fD~V~~~~~~~-------~----~~~~l~~~~~~Lkpg-G~lv~ 174 (232)
T 3ntv_A 131 ALEQFENVNDKVYDMIFIDAAKA-------Q----SKKFFEIYTPLLKHQ-GLVIT 174 (232)
T ss_dssp GGGCHHHHTTSCEEEEEEETTSS-------S----HHHHHHHHGGGEEEE-EEEEE
T ss_pred HHHHHHhhccCCccEEEEcCcHH-------H----HHHHHHHHHHhcCCC-eEEEE
Confidence 9875 3 3357899999997632 1 566778899999999 98866
No 76
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.43 E-value=3.7e-13 Score=143.04 Aligned_cols=121 Identities=16% Similarity=0.190 Sum_probs=97.1
Q ss_pred HHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-CC
Q psy19 304 VRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-FK 381 (494)
Q Consensus 304 l~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~~ 381 (494)
..++.+.+|.+|||+|||+|..++.+|...+ ...|+|+|+++.+++.+++|++.+|+ . +.+.++|+..++ ..
T Consensus 94 a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~----~--v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 94 GVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA----P--LAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC----C--CEEECSCHHHHHHHH
T ss_pred HHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----e--EEEEECCHHHhhhhc
Confidence 3455778999999999999999999887654 36899999999999999999998875 2 678999998875 23
Q ss_pred CCCeeEEEEcCCCcc-cc----CC------c---cchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 382 PACVDGIVTDLPFGK-RV----GS------K---SNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 ~~~~D~IVtNPPYG~-r~----~~------~---~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.+.||+|++|||+.. .+ .. . ..+..++..++..+.++|||| |++++.|+
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvysTC 230 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPG-GVLVYSTC 230 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEE-EEEEEEES
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 478999999999831 11 00 0 123456788999999999999 99999877
No 77
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.42 E-value=1.5e-12 Score=145.28 Aligned_cols=117 Identities=13% Similarity=0.059 Sum_probs=94.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-cCCCCCeeEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-CFKPACVDGIV 389 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~~~~~~~D~IV 389 (494)
+|.+|||+|||||.+++.+|... ...|+++|+++.+++.|++|++.+|+. ..++.++++|+++. +...++||+||
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~---~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLT---GRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCC---STTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC---ccceEEEecCHHHHHHhcCCCccEEE
Confidence 67899999999999999998863 246999999999999999999998762 14678999999884 43446899999
Q ss_pred EcCCCccccCC---ccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 390 TDLPFGKRVGS---KSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 390 tNPPYG~r~~~---~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+||||...... ..+....|..++..+.++|+|| |.+++.++.
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkpg-G~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG-GTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEE-EEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCC-cEEEEEECC
Confidence 99997433221 1245678999999999999999 999987765
No 78
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.42 E-value=5.6e-12 Score=121.84 Aligned_cols=143 Identities=17% Similarity=0.094 Sum_probs=108.0
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCC-CeeE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPA-CVDG 387 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~-~~D~ 387 (494)
..+|.+|+|+|||||.+++.+|..+|..+|+|+|+++.+++.|++|++.+|+ .+++.+.++|..+. ++.+ .||+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl----~~~i~~~~~d~l~~-l~~~~~~D~ 87 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL----KEKIQVRLANGLAA-FEETDQVSV 87 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGG-CCGGGCCCE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEECchhhh-cccCcCCCE
Confidence 3578899999999999999999988778999999999999999999999876 45689999998753 2223 6998
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec-CHHHHHHHHHhccccceeeeeEEEccCCceEEEEE
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS-DRKHLIQALHITSALWKCRKQIKINMSGMKSFVFI 466 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~-~~~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~~i~v 466 (494)
|+.. .++ ..+...++......|+++ |++++-.. ....+.+.+...| |.......+...+..-.|.+
T Consensus 88 Ivia-----G~G-----g~~i~~Il~~~~~~L~~~-~~lVlq~~~~~~~vr~~L~~~G--f~i~~e~lv~e~~~~Yeii~ 154 (225)
T 3kr9_A 88 ITIA-----GMG-----GRLIARILEEGLGKLANV-ERLILQPNNREDDLRIWLQDHG--FQIVAESILEEAGKFYEILV 154 (225)
T ss_dssp EEEE-----EEC-----HHHHHHHHHHTGGGCTTC-CEEEEEESSCHHHHHHHHHHTT--EEEEEEEEEEETTEEEEEEE
T ss_pred EEEc-----CCC-----hHHHHHHHHHHHHHhCCC-CEEEEECCCCHHHHHHHHHHCC--CEEEEEEEEEECCEEEEEEE
Confidence 8752 222 345667888999999998 88776333 3455777777777 67777666665555445555
Q ss_pred Eee
Q psy19 467 LNR 469 (494)
Q Consensus 467 ~~~ 469 (494)
..+
T Consensus 155 ~~~ 157 (225)
T 3kr9_A 155 VEA 157 (225)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 79
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.41 E-value=1.6e-12 Score=137.69 Aligned_cols=127 Identities=19% Similarity=0.225 Sum_probs=99.8
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCC-CeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPH-TFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~-~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+..+..+..+.++.+|||+|||+|..++.++...++ ..++|+|+++.+++.+++|+..+|+ .++.+.++|+..+
T Consensus 248 s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-----~~v~~~~~D~~~~ 322 (450)
T 2yxl_A 248 SAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-----KIVKPLVKDARKA 322 (450)
T ss_dssp HHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEECSCTTCC
T ss_pred hHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-----CcEEEEEcChhhc
Confidence 334445567889999999999999999998887655 7999999999999999999998875 2478899999887
Q ss_pred c--CCCCCeeEEEEcCCCc-ccc-C---------Cc---cchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 379 C--FKPACVDGIVTDLPFG-KRV-G---------SK---SNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 379 ~--~~~~~~D~IVtNPPYG-~r~-~---------~~---~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+ ++++.||+|++|||+. ... . .. ..+..+...++..+.++|||| |++++.|+.
T Consensus 323 ~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvy~tcs 391 (450)
T 2yxl_A 323 PEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG-GRLLYTTCS 391 (450)
T ss_dssp SSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE-EEEEEEESC
T ss_pred chhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence 5 4446899999999983 211 0 01 123344578899999999999 999998773
No 80
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.41 E-value=6.4e-12 Score=119.07 Aligned_cols=114 Identities=20% Similarity=0.150 Sum_probs=92.3
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++++...++......++.+..+|+..+++++++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 47889999999999999999887 6799999999999999999998776533334467899999999887778999999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++..+.. +.. ......+++++.++|+|| |++++.+.
T Consensus 107 ~~~~l~~-~~~----~~~~~~~l~~~~~~L~pg-G~l~~~~~ 142 (235)
T 3sm3_A 107 MQAFLTS-VPD----PKERSRIIKEVFRVLKPG-AYLYLVEF 142 (235)
T ss_dssp EESCGGG-CCC----HHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred Ecchhhc-CCC----HHHHHHHHHHHHHHcCCC-eEEEEEEC
Confidence 9876542 222 122446788999999999 99988643
No 81
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.41 E-value=2.7e-12 Score=131.02 Aligned_cols=111 Identities=21% Similarity=0.235 Sum_probs=89.1
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|++++. |. .+..++|+|+++.+++.|++|++.+++ ..++.++++|+.++. +.||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l----~~~v~~~~~D~~~~~---~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKL----EHKIIPILSDVREVD---VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCGGGCC---CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECChHHhc---CCCcEEE
Confidence 5788999999999999999 76 367999999999999999999998875 345789999999875 6899999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH--HHHHHHHHhc
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR--KHLIQALHIT 443 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~--~~l~~~l~~~ 443 (494)
+|||+... .++..+.++|+|| |.+++.+... ..+.+.+...
T Consensus 264 ~dpP~~~~------------~~l~~~~~~L~~g-G~l~~~~~~~~~~~~~~~l~~~ 306 (336)
T 2yx1_A 264 MNLPKFAH------------KFIDKALDIVEEG-GVIHYYTIGKDFDKAIKLFEKK 306 (336)
T ss_dssp ECCTTTGG------------GGHHHHHHHEEEE-EEEEEEEEESSSHHHHHHHHHH
T ss_pred ECCcHhHH------------HHHHHHHHHcCCC-CEEEEEEeecCchHHHHHHHHh
Confidence 99997532 4556788899998 9888865432 3344445443
No 82
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.41 E-value=3.7e-12 Score=122.17 Aligned_cols=117 Identities=10% Similarity=0.102 Sum_probs=92.2
Q ss_pred cchHHHHHHH---HHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceee
Q psy19 294 TLKPTIAYNM---VRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSP 370 (494)
Q Consensus 294 ~L~e~lAa~l---l~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~ 370 (494)
|.+..+++.+ +......++.+|||+|||+|++++.++...+...|+|+|+++.+++.|+.|+..+ .++.+
T Consensus 54 ~~~~~~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~v~~ 126 (230)
T 1fbn_A 54 PNKSKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-------ENIIP 126 (230)
T ss_dssp TTTCHHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-------TTEEE
T ss_pred cchhHHHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-------CCeEE
Confidence 4455566666 3444567889999999999999999998865679999999999999999997643 34688
Q ss_pred eeecccc----ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 371 LVCNVRQ----LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 371 ~~~Da~~----l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+.+|+.. +++. ++||+|+.++|.. ..+..+++++.++|+|| |++++.
T Consensus 127 ~~~d~~~~~~~~~~~-~~~D~v~~~~~~~----------~~~~~~l~~~~~~Lkpg-G~l~i~ 177 (230)
T 1fbn_A 127 ILGDANKPQEYANIV-EKVDVIYEDVAQP----------NQAEILIKNAKWFLKKG-GYGMIA 177 (230)
T ss_dssp EECCTTCGGGGTTTS-CCEEEEEECCCST----------THHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EECCCCCcccccccC-ccEEEEEEecCCh----------hHHHHHHHHHHHhCCCC-cEEEEE
Confidence 8999987 6655 6899999887521 12456777899999999 998885
No 83
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.40 E-value=7.8e-12 Score=122.18 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=109.3
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
+.++.+|+|+|||+|.+++.+|..++...|+|+|+++.+++.|++|++.+|+ .+++.+.++|..+...+...||+|
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl----~~~I~v~~gD~l~~~~~~~~~D~I 94 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL----TEQIDVRKGNGLAVIEKKDAIDTI 94 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEecchhhccCccccccEE
Confidence 3578899999999999999999987777899999999999999999999875 456899999998864432359988
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec-CHHHHHHHHHhccccceeeeeEEEccCCceEEEEEE
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS-DRKHLIQALHITSALWKCRKQIKINMSGMKSFVFIL 467 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~-~~~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~~i~v~ 467 (494)
|. ..++ ..+...++....+.|+++ +++++-.- ....+.+.+.+.| |.......+...+..-.+...
T Consensus 95 vi-----agmG-----g~lI~~IL~~~~~~L~~~-~~lIlq~~~~~~~lr~~L~~~G--f~i~~E~lv~e~~k~Yeii~~ 161 (244)
T 3gnl_A 95 VI-----AGMG-----GTLIRTILEEGAAKLAGV-TKLILQPNIAAWQLREWSEQNN--WLITSEAILREDNKVYEIMVL 161 (244)
T ss_dssp EE-----EEEC-----HHHHHHHHHHTGGGGTTC-CEEEEEESSCHHHHHHHHHHHT--EEEEEEEEEEETTEEEEEEEE
T ss_pred EE-----eCCc-----hHHHHHHHHHHHHHhCCC-CEEEEEcCCChHHHHHHHHHCC--CEEEEEEEEEECCEEEEEEEE
Confidence 75 1222 345677888999999987 87665433 3455777777777 566666666555554455555
Q ss_pred eeC
Q psy19 468 NRT 470 (494)
Q Consensus 468 ~~~ 470 (494)
.+.
T Consensus 162 ~~~ 164 (244)
T 3gnl_A 162 APS 164 (244)
T ss_dssp EEC
T ss_pred EeC
Confidence 543
No 84
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.40 E-value=8.4e-13 Score=124.90 Aligned_cols=131 Identities=11% Similarity=0.029 Sum_probs=99.4
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.++.+.....++.+....++.+|||+|||+|.++..++..++...++|+|+++.+++.|++++...++......++.+.+
T Consensus 11 ~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (219)
T 3jwg_A 11 LNLNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ 90 (219)
T ss_dssp -CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE
T ss_pred CcchHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe
Confidence 35777777777777766678899999999999999999887668999999999999999999987654211112678999
Q ss_pred eccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+|+..++...++||+|+++-.+.. +. ......+++++.++|+|| |.+ +.++
T Consensus 91 ~d~~~~~~~~~~fD~V~~~~~l~~-~~-----~~~~~~~l~~~~~~Lkpg-G~~-i~~~ 141 (219)
T 3jwg_A 91 SSLVYRDKRFSGYDAATVIEVIEH-LD-----ENRLQAFEKVLFEFTRPQ-TVI-VSTP 141 (219)
T ss_dssp CCSSSCCGGGTTCSEEEEESCGGG-CC-----HHHHHHHHHHHHTTTCCS-EEE-EEEE
T ss_pred CcccccccccCCCCEEEEHHHHHh-CC-----HHHHHHHHHHHHHhhCCC-EEE-EEcc
Confidence 999777666679999999755432 11 112457788999999998 844 4444
No 85
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.40 E-value=4.6e-12 Score=121.77 Aligned_cols=129 Identities=12% Similarity=0.037 Sum_probs=103.7
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
+.+.+..++.++..+...++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++|+..+++ ..++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~ 146 (248)
T 2yvl_A 73 QIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL----GKNVKFFN 146 (248)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC----CTTEEEEC
T ss_pred CcccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC----CCcEEEEE
Confidence 3445666678888888889999999999999999999887 67999999999999999999987754 34578899
Q ss_pred eccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHH
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALH 441 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~ 441 (494)
+|+.+..+.++.||+|++|||.. ..+++.+.++|+|| |++++.++....+.+...
T Consensus 147 ~d~~~~~~~~~~~D~v~~~~~~~-------------~~~l~~~~~~L~~g-G~l~~~~~~~~~~~~~~~ 201 (248)
T 2yvl_A 147 VDFKDAEVPEGIFHAAFVDVREP-------------WHYLEKVHKSLMEG-APVGFLLPTANQVIKLLE 201 (248)
T ss_dssp SCTTTSCCCTTCBSEEEECSSCG-------------GGGHHHHHHHBCTT-CEEEEEESSHHHHHHHHH
T ss_pred cChhhcccCCCcccEEEECCcCH-------------HHHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHH
Confidence 99987542456899999999821 13455788999999 999999997655555444
No 86
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.40 E-value=1.2e-12 Score=137.89 Aligned_cols=128 Identities=19% Similarity=0.130 Sum_probs=102.1
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
...+..++.+..+.++.+|||+|||+|+.++.++...++..++|+|+++.+++.+++|+..+|+ .+.+.++|+.
T Consensus 232 d~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~------~~~~~~~D~~ 305 (429)
T 1sqg_A 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM------KATVKQGDGR 305 (429)
T ss_dssp CHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC------CCEEEECCTT
T ss_pred CHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC------CeEEEeCchh
Confidence 3444555566778899999999999999999999887668999999999999999999998765 2478899998
Q ss_pred ccc--CCCCCeeEEEEcCCCccc-c-CC---------c---cchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 377 QLC--FKPACVDGIVTDLPFGKR-V-GS---------K---SNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 377 ~l~--~~~~~~D~IVtNPPYG~r-~-~~---------~---~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.++ ++++.||+|++|||+... . .. . ..+..++..++..+.++|||| |++++.|+
T Consensus 306 ~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG-G~lvystc 375 (429)
T 1sqg_A 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATC 375 (429)
T ss_dssp CTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEES
T ss_pred hchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence 875 445689999999998421 1 00 0 123456778999999999999 99999875
No 87
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.40 E-value=1.7e-12 Score=130.28 Aligned_cols=123 Identities=16% Similarity=0.154 Sum_probs=99.9
Q ss_pred cchHHHHHHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 294 TLKPTIAYNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 294 ~L~e~lAa~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
++....+..++.... +.++.+|||+|||+|.+++.++..+ +..++|+|+++.+++.|++|+..+++ ..++.+.+
T Consensus 99 ~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~ 173 (312)
T 3vc1_A 99 RLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI----DDHVRSRV 173 (312)
T ss_dssp HHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEE
T ss_pred hHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC----CCceEEEE
Confidence 444555555666665 7789999999999999999988764 57899999999999999999998765 44678999
Q ss_pred eccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+|+.++++++++||+|+++-.+.. + + ...+++++.++|+|| |+++++++
T Consensus 174 ~d~~~~~~~~~~fD~V~~~~~l~~-~----~----~~~~l~~~~~~Lkpg-G~l~~~~~ 222 (312)
T 3vc1_A 174 CNMLDTPFDKGAVTASWNNESTMY-V----D----LHDLFSEHSRFLKVG-GRYVTITG 222 (312)
T ss_dssp CCTTSCCCCTTCEEEEEEESCGGG-S----C----HHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CChhcCCCCCCCEeEEEECCchhh-C----C----HHHHHHHHHHHcCCC-cEEEEEEc
Confidence 999998887789999999754331 1 1 567788999999999 99998764
No 88
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.40 E-value=7.1e-12 Score=117.10 Aligned_cols=103 Identities=19% Similarity=0.205 Sum_probs=75.7
Q ss_pred HHHHHHHHHHh---CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 297 PTIAYNMVRLA---SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 297 e~lAa~ll~la---~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
..++..|+.++ ...++.+|||+|||+|.+++.++.. +...++|+|+++.+++.|++|+. ++.++++
T Consensus 34 ~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~~ 102 (200)
T 1ne2_A 34 ASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG----------GVNFMVA 102 (200)
T ss_dssp HHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT----------TSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC----------CCEEEEC
Confidence 34444444433 4557889999999999999998876 33479999999999999999976 2478999
Q ss_pred ccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcc
Q psy19 374 NVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIV 419 (494)
Q Consensus 374 Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvL 419 (494)
|+.+++ ++||+|++||||+..... ....+++++.+++
T Consensus 103 d~~~~~---~~~D~v~~~~p~~~~~~~------~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 103 DVSEIS---GKYDTWIMNPPFGSVVKH------SDRAFIDKAFETS 139 (200)
T ss_dssp CGGGCC---CCEEEEEECCCC-------------CHHHHHHHHHHE
T ss_pred cHHHCC---CCeeEEEECCCchhccCc------hhHHHHHHHHHhc
Confidence 999864 689999999999854321 1235666777777
No 89
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.40 E-value=3.6e-12 Score=119.31 Aligned_cols=137 Identities=15% Similarity=0.184 Sum_probs=99.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVT 390 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IVt 390 (494)
++.+|||+|||+|.+++.++..+++..++|+|+++.+++.|+.|+..+++ . .+.+.++|+.+++ +.++||+|++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~-~v~~~~~d~~~~~-~~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL----E-NIEPVQSRVEEFP-SEPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC----S-SEEEEECCTTTSC-CCSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC----C-CeEEEecchhhCC-ccCCcCEEEE
Confidence 47899999999999999999888888999999999999999999997764 2 2789999998875 3468999999
Q ss_pred cCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH--HHHHHHHHhccccceeeeeE--EEccCCceEEEEE
Q psy19 391 DLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR--KHLIQALHITSALWKCRKQI--KINMSGMKSFVFI 466 (494)
Q Consensus 391 NPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~--~~l~~~l~~~~~l~~~~~~~--~v~~Ggl~~~i~v 466 (494)
+. . .+ +..++..+.++|+|| |.+++..+.. ..+...+. + |...+.. .+...+-..++++
T Consensus 139 ~~-----~---~~----~~~~l~~~~~~L~~g-G~l~~~~~~~~~~~~~~~~~--g--~~~~~~~~~~~~~~~~~~~~~~ 201 (207)
T 1jsx_A 139 RA-----F---AS----LNDMVSWCHHLPGEQ-GRFYALKGQMPEDEIALLPE--E--YQVESVVKLQVPALDGERHLVV 201 (207)
T ss_dssp SC-----S---SS----HHHHHHHHTTSEEEE-EEEEEEESSCCHHHHHTSCT--T--EEEEEEEEEECC--CCEEEEEE
T ss_pred ec-----c---CC----HHHHHHHHHHhcCCC-cEEEEEeCCCchHHHHHHhc--C--CceeeeeeeccCCCCCceEEEE
Confidence 64 1 11 457788999999999 9998876532 22332222 2 4444332 3333344556666
Q ss_pred EeeC
Q psy19 467 LNRT 470 (494)
Q Consensus 467 ~~~~ 470 (494)
+++.
T Consensus 202 ~~k~ 205 (207)
T 1jsx_A 202 IKAN 205 (207)
T ss_dssp EEEC
T ss_pred EEec
Confidence 6553
No 90
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.39 E-value=3e-12 Score=122.80 Aligned_cols=120 Identities=15% Similarity=0.171 Sum_probs=91.2
Q ss_pred cchHHHHHHHHH---HhCCCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCccccee
Q psy19 294 TLKPTIAYNMVR---LASPIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVS 369 (494)
Q Consensus 294 ~L~e~lAa~ll~---la~~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~ 369 (494)
|.+..+++.++. .....++.+|||+|||+|++++.++... +...++|+|+++.+++.+.++++.+ .++.
T Consensus 57 ~~~~~~~~~~~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~ 129 (233)
T 2ipx_A 57 PFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNII 129 (233)
T ss_dssp TTTCHHHHHHHTTCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEE
T ss_pred ccchhHHHHHHhHHheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeE
Confidence 344555555543 3346788999999999999999998874 5679999999999999999888753 2467
Q ss_pred eeeecccc---ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 370 PLVCNVRQ---LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 370 ~~~~Da~~---l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++++|+.+ +++.+++||+|++|+|. . + ....++.++.++|+|| |++++.+.
T Consensus 130 ~~~~d~~~~~~~~~~~~~~D~V~~~~~~------~-~---~~~~~~~~~~~~Lkpg-G~l~i~~~ 183 (233)
T 2ipx_A 130 PVIEDARHPHKYRMLIAMVDVIFADVAQ------P-D---QTRIVALNAHTFLRNG-GHFVISIK 183 (233)
T ss_dssp EECSCTTCGGGGGGGCCCEEEEEECCCC------T-T---HHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred EEEcccCChhhhcccCCcEEEEEEcCCC------c-c---HHHHHHHHHHHHcCCC-eEEEEEEc
Confidence 89999987 34445789999999981 1 1 1334566799999999 99888544
No 91
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.39 E-value=2.4e-13 Score=130.75 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|.+++.++.. +..|+|+|+++.+++.|++|+..+++ ..++.++++|+.+++ .+++||+|+
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~D~v~ 149 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGI----ADKIEFICGDFLLLA-SFLKADVVF 149 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHG-GGCCCSEEE
T ss_pred cCCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC----CcCeEEEECChHHhc-ccCCCCEEE
Confidence 36889999999999999999987 58999999999999999999998764 346889999999886 347899999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcE
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGR 425 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~ 425 (494)
+||||+... ... ..+.++.++|+|| |.
T Consensus 150 ~~~~~~~~~-~~~-------~~~~~~~~~L~pg-G~ 176 (241)
T 3gdh_A 150 LSPPWGGPD-YAT-------AETFDIRTMMSPD-GF 176 (241)
T ss_dssp ECCCCSSGG-GGG-------SSSBCTTTSCSSC-HH
T ss_pred ECCCcCCcc-hhh-------hHHHHHHhhcCCc-ce
Confidence 999997422 111 1222467788887 65
No 92
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.39 E-value=4.3e-12 Score=123.86 Aligned_cols=121 Identities=19% Similarity=0.206 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecc
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNV 375 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da 375 (494)
...++..++......++.+|||+|||+|.+++.++... +..++|+|+++.+++.|++++...++ ..++.+..+|+
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~ 120 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL----ANRVTFSYADA 120 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCT
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC----CcceEEEECcc
Confidence 33455666777777889999999999999999988765 68999999999999999999987764 34678999999
Q ss_pred ccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 376 RQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 376 ~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.++++++++||+|+++..+.. +. + ...+++++.++|+|| |++++..
T Consensus 121 ~~~~~~~~~fD~v~~~~~l~~-~~---~----~~~~l~~~~~~L~pg-G~l~i~~ 166 (273)
T 3bus_A 121 MDLPFEDASFDAVWALESLHH-MP---D----RGRALREMARVLRPG-GTVAIAD 166 (273)
T ss_dssp TSCCSCTTCEEEEEEESCTTT-SS---C----HHHHHHHHHTTEEEE-EEEEEEE
T ss_pred ccCCCCCCCccEEEEechhhh-CC---C----HHHHHHHHHHHcCCC-eEEEEEE
Confidence 999887789999999876542 11 2 246777899999999 9988865
No 93
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.39 E-value=1.4e-12 Score=126.62 Aligned_cols=124 Identities=20% Similarity=0.143 Sum_probs=90.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccC--CCCcccceeeeeecccc-cc--CCCCC
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSG--NLNRELKVSPLVCNVRQ-LC--FKPAC 384 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~--~~~~~~~i~~~~~Da~~-l~--~~~~~ 384 (494)
.++.+|||+|||+|.+++.+|..+|+..++|+|+++.+++.|+.|+..... ..+ ..++.++++|+.. ++ +++++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~-~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG-FQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC-CTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC-CCeEEEEECcHHHhhhhhCCCcC
Confidence 356789999999999999999998889999999999999999999864210 001 2457899999987 55 66789
Q ss_pred eeEEEEcCC--CccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHH
Q psy19 385 VDGIVTDLP--FGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLI 437 (494)
Q Consensus 385 ~D~IVtNPP--YG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~ 437 (494)
+|.|+++.| |...... ....++..+++++.++|+|| |.+++.+.......
T Consensus 124 ~D~v~~~~~dp~~k~~h~--krr~~~~~~l~~~~~~LkpG-G~l~~~td~~~~~~ 175 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKH--KWRIISPTLLAEYAYVLRVG-GLVYTITDVLELHD 175 (235)
T ss_dssp EEEEEEESCC-------------CCCHHHHHHHHHHEEEE-EEEEEEESCHHHHH
T ss_pred eeEEEEeCCCchhhhhhh--hhhhhhHHHHHHHHHHCCCC-CEEEEEeCCHHHHH
Confidence 999988754 3221100 01112356888999999999 99999998765433
No 94
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.39 E-value=1.9e-12 Score=125.85 Aligned_cols=114 Identities=17% Similarity=0.215 Sum_probs=91.8
Q ss_pred HHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC
Q psy19 301 YNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF 380 (494)
Q Consensus 301 a~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~ 380 (494)
..++......++.+|||+|||+|.++..++..+ ..++|+|+++.+++.|++++...++ .++.+.++|+..+++
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~-----~~v~~~~~d~~~l~~ 99 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGH-----QQVEYVQGDAEQMPF 99 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCC-CCCS
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCC-----CceEEEEecHHhCCC
Confidence 345566677788999999999999999988874 4999999999999999999987654 247899999999988
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
++++||+|+++-.... + .+ ...+++++.++|+|| |++++..
T Consensus 100 ~~~~fD~V~~~~~l~~-~---~d----~~~~l~~~~r~Lkpg-G~l~~~~ 140 (260)
T 1vl5_A 100 TDERFHIVTCRIAAHH-F---PN----PASFVSEAYRVLKKG-GQLLLVD 140 (260)
T ss_dssp CTTCEEEEEEESCGGG-C---SC----HHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCCCEEEEEEhhhhHh-c---CC----HHHHHHHHHHHcCCC-CEEEEEE
Confidence 8789999999854331 1 12 236777899999999 9988863
No 95
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.39 E-value=3.8e-12 Score=129.17 Aligned_cols=135 Identities=13% Similarity=0.094 Sum_probs=101.9
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhcc----CCC--Ccc
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNS----GNL--NRE 365 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g----~~~--~~~ 365 (494)
+...+..++.++..+...++.+|||+|||+|.+++.++.. .+...++|+|+++.+++.|++|+...+ ++. +..
T Consensus 87 ~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~ 166 (336)
T 2b25_A 87 AITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWP 166 (336)
T ss_dssp CCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCC
T ss_pred cccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccC
Confidence 3466777778888888889999999999999999999887 466899999999999999999998643 110 112
Q ss_pred cceeeeeeccccc--cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHH
Q psy19 366 LKVSPLVCNVRQL--CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALH 441 (494)
Q Consensus 366 ~~i~~~~~Da~~l--~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~ 441 (494)
.++.+.++|+.+. ++++++||+|++|+|-.. .++.++.++|+|| |++++.++....+.+.+.
T Consensus 167 ~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~-------------~~l~~~~~~Lkpg-G~lv~~~~~~~~~~~~~~ 230 (336)
T 2b25_A 167 DNVDFIHKDISGATEDIKSLTFDAVALDMLNPH-------------VTLPVFYPHLKHG-GVCAVYVVNITQVIELLD 230 (336)
T ss_dssp CCEEEEESCTTCCC-------EEEEEECSSSTT-------------TTHHHHGGGEEEE-EEEEEEESSHHHHHHHHH
T ss_pred CceEEEECChHHcccccCCCCeeEEEECCCCHH-------------HHHHHHHHhcCCC-cEEEEEeCCHHHHHHHHH
Confidence 4678999999886 445568999999987221 1456799999999 999999987655544443
No 96
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.39 E-value=9.4e-12 Score=116.59 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=92.4
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
..++.+|||+|||+|.+++.++.. +...++|+|+++.+++.|++|+..+++ .. +.+.++|+...+ +++||+|
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~-v~~~~~d~~~~~--~~~fD~i 129 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGI----YD-IALQKTSLLADV--DGKFDLI 129 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC----CC-CEEEESSTTTTC--CSCEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC----Cc-eEEEeccccccC--CCCceEE
Confidence 457889999999999999998875 446999999999999999999998764 22 689999997753 4789999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec---CHHHHHHHHHhcc
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS---DRKHLIQALHITS 444 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~---~~~~l~~~l~~~~ 444 (494)
++|+|+. .+..+++++.++|+|| |++++... ....+...+...|
T Consensus 130 ~~~~~~~-----------~~~~~l~~~~~~L~~g-G~l~~~~~~~~~~~~~~~~~~~~G 176 (205)
T 3grz_A 130 VANILAE-----------ILLDLIPQLDSHLNED-GQVIFSGIDYLQLPKIEQALAENS 176 (205)
T ss_dssp EEESCHH-----------HHHHHGGGSGGGEEEE-EEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred EECCcHH-----------HHHHHHHHHHHhcCCC-CEEEEEecCcccHHHHHHHHHHcC
Confidence 9999863 2467788999999999 99888532 2344666666655
No 97
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.38 E-value=1.7e-12 Score=125.93 Aligned_cols=121 Identities=16% Similarity=0.223 Sum_probs=89.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCC----Ccccceeeeeecccc-cc--CCC
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNL----NRELKVSPLVCNVRQ-LC--FKP 382 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~----~~~~~i~~~~~Da~~-l~--~~~ 382 (494)
.++..|||+|||+|.+++.+|..+++..++|+|+++.+++.|++|+..+.... ++ .++.++++|+.+ ++ +..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 46789999999999999999999888899999999999999999998751000 11 357899999987 55 556
Q ss_pred CCeeEEEEcC--CCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 383 ACVDGIVTDL--PFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 383 ~~~D~IVtNP--PYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
+++|.|+.+. |+......... .++..++.++.++|+|| |.+++.+....
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r--~~~~~~l~~~~~~Lkpg-G~l~~~td~~~ 177 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKAR--IITNTLLSEYAYVLKEG-GVVYTITDVKD 177 (246)
T ss_dssp TCEEEEEEESCCCC------CSS--CCCHHHHHHHHHHEEEE-EEEEEEESCHH
T ss_pred cccCEEEEECCCcccccchhHHh--hccHHHHHHHHHHcCCC-CEEEEEeccHH
Confidence 7899887663 33211111111 12467888999999999 99999887654
No 98
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.38 E-value=7.3e-13 Score=140.55 Aligned_cols=140 Identities=17% Similarity=0.111 Sum_probs=104.1
Q ss_pred cccccccccc-cccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHh
Q psy19 280 TSLHRRNIVE-FNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLH 357 (494)
Q Consensus 280 ~sL~~Rgy~~-~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~ 357 (494)
.+.++.|+.. ..++++ .+..++.+.+|.+|||+|||+|+.++.+|...+ ...|+|+|+++.+++.+++|++.
T Consensus 79 ~~~~~~G~~~vQd~ss~------l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r 152 (456)
T 3m4x_A 79 SFLHQAGYEYSQEPSAM------IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER 152 (456)
T ss_dssp SHHHHTTSCEECCTTTH------HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH
T ss_pred ChHHhCCcEEEECHHHH------HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 3556666632 223322 233445678999999999999999998886533 46899999999999999999999
Q ss_pred ccCCCCcccceeeeeecccccc-CCCCCeeEEEEcCCCcc-cc--C-----------CccchHHHHHHHHHHHhhcccCC
Q psy19 358 NSGNLNRELKVSPLVCNVRQLC-FKPACVDGIVTDLPFGK-RV--G-----------SKSNNFLLYRLFLIEIGKIVRPQ 422 (494)
Q Consensus 358 ~g~~~~~~~~i~~~~~Da~~l~-~~~~~~D~IVtNPPYG~-r~--~-----------~~~~~~~ly~~fL~~l~rvLkpg 422 (494)
+|+ .++.+.++|+..++ ..++.||+|++|||+.. .. . ....+..+...+|..+.++||||
T Consensus 153 ~g~-----~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 227 (456)
T 3m4x_A 153 WGV-----SNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK 227 (456)
T ss_dssp HTC-----SSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred cCC-----CceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 875 24688899998874 22478999999999621 11 0 00123456778999999999999
Q ss_pred CcEEEEEec
Q psy19 423 IGRAILLTS 431 (494)
Q Consensus 423 ~G~lvllt~ 431 (494)
|++++.|+
T Consensus 228 -G~LvYsTC 235 (456)
T 3m4x_A 228 -GQLIYSTC 235 (456)
T ss_dssp -EEEEEEES
T ss_pred -cEEEEEEe
Confidence 99999887
No 99
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.38 E-value=4.9e-12 Score=116.97 Aligned_cols=113 Identities=12% Similarity=0.122 Sum_probs=91.3
Q ss_pred HHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCC
Q psy19 303 MVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKP 382 (494)
Q Consensus 303 ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~ 382 (494)
++.+....++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++++...++ ..+.+.++|+..+++ +
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~~~-~ 95 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENL-----DNLHTRVVDLNNLTF-D 95 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEECCGGGCCC-C
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCC-----CCcEEEEcchhhCCC-C
Confidence 444556667789999999999999998887 67999999999999999999987654 247899999999877 6
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
++||+|+++.++.. +. ..+ ...+++++.++|+|| |++++++
T Consensus 96 ~~~D~v~~~~~l~~-~~-~~~----~~~~l~~~~~~L~~g-G~l~~~~ 136 (199)
T 2xvm_A 96 RQYDFILSTVVLMF-LE-AKT----IPGLIANMQRCTKPG-GYNLIVA 136 (199)
T ss_dssp CCEEEEEEESCGGG-SC-GGG----HHHHHHHHHHTEEEE-EEEEEEE
T ss_pred CCceEEEEcchhhh-CC-HHH----HHHHHHHHHHhcCCC-eEEEEEE
Confidence 79999999987653 21 112 346777899999999 9988765
No 100
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.38 E-value=3.9e-12 Score=124.58 Aligned_cols=120 Identities=21% Similarity=0.228 Sum_probs=98.2
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
.++..+.......++.+|||+|||+|.++..++..+|+..++|+|+++.+++.|+.++...++ .++.+.++|+..
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~ 98 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-----KNVKFLQANIFS 98 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCGGG
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEccccc
Confidence 444455555556788999999999999999999988889999999999999999999987764 247899999999
Q ss_pred ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 378 LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 378 l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+++++++||+|+++..+..- . + ...+++++.++|+|| |.+++..+
T Consensus 99 ~~~~~~~fD~v~~~~~l~~~-~---~----~~~~l~~~~~~L~pg-G~l~~~~~ 143 (276)
T 3mgg_A 99 LPFEDSSFDHIFVCFVLEHL-Q---S----PEEALKSLKKVLKPG-GTITVIEG 143 (276)
T ss_dssp CCSCTTCEEEEEEESCGGGC-S---C----HHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCCCCCCeeEEEEechhhhc-C---C----HHHHHHHHHHHcCCC-cEEEEEEc
Confidence 98877899999998765421 1 2 236777899999999 99988764
No 101
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.38 E-value=1.1e-11 Score=130.85 Aligned_cols=127 Identities=18% Similarity=0.168 Sum_probs=97.6
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.+..+.+...++..+...++.+|||+|||+|++++.+|.. +..++|+|+++.+++.|++|+..+++ .++.+++
T Consensus 268 ~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~-----~~v~f~~ 340 (433)
T 1uwv_A 268 AGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGL-----QNVTFYH 340 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEE
T ss_pred HHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEEEE
Confidence 3457778888888888888899999999999999999887 67999999999999999999998765 2578999
Q ss_pred eccccc----cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHH
Q psy19 373 CNVRQL----CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQAL 440 (494)
Q Consensus 373 ~Da~~l----~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l 440 (494)
+|+.+. ++.+++||+|++||||.. .. ++.. .+.+ ++| ++++++++++..+.+.+
T Consensus 341 ~d~~~~l~~~~~~~~~fD~Vv~dPPr~g---~~----~~~~----~l~~-~~p--~~ivyvsc~p~tlard~ 398 (433)
T 1uwv_A 341 ENLEEDVTKQPWAKNGFDKVLLDPARAG---AA----GVMQ----QIIK-LEP--IRIVYVSCNPATLARDS 398 (433)
T ss_dssp CCTTSCCSSSGGGTTCCSEEEECCCTTC---CH----HHHH----HHHH-HCC--SEEEEEESCHHHHHHHH
T ss_pred CCHHHHhhhhhhhcCCCCEEEECCCCcc---HH----HHHH----HHHh-cCC--CeEEEEECChHHHHhhH
Confidence 999873 344568999999999852 11 2222 2322 455 45777788876665544
No 102
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.37 E-value=2.5e-12 Score=137.41 Aligned_cols=121 Identities=16% Similarity=0.108 Sum_probs=96.2
Q ss_pred HHhCCC--CCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-
Q psy19 305 RLASPI--PGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF- 380 (494)
Q Consensus 305 ~la~~~--~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~- 380 (494)
.+..+. ++.+|||+|||+|...+.+|...+ ...|+|+|+++.+++.+++|++.+|+ .++.+.++|+..++.
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-----~nv~~~~~D~~~~~~~ 183 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-----SNVALTHFDGRVFGAA 183 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEEECCCSTTHHHH
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCCHHHhhhh
Confidence 344556 899999999999999999887643 47999999999999999999998875 246889999988753
Q ss_pred CCCCeeEEEEcCCCc-ccc----CC------c---cchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 381 KPACVDGIVTDLPFG-KRV----GS------K---SNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG-~r~----~~------~---~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
..+.||.|++|||+. ... .. . ..+..+...+|.++.++|||| |++++.|+
T Consensus 184 ~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~LvysTc 247 (479)
T 2frx_A 184 VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPG-GTLVYSTC 247 (479)
T ss_dssp STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecc
Confidence 346899999999983 111 00 0 123456778999999999999 99999877
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.37 E-value=2.8e-12 Score=124.59 Aligned_cols=136 Identities=15% Similarity=0.152 Sum_probs=102.5
Q ss_pred ccccccccccc---ccccccccccchHHHHHHHHHHh---CCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHH
Q psy19 274 GLPVTQTSLHR---RNIVEFNITTLKPTIAYNMVRLA---SPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEK 346 (494)
Q Consensus 274 ~l~lsg~sL~~---Rgy~~~~~a~L~e~lAa~ll~la---~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~ 346 (494)
|-...||.+.+ ..||. =.|-+..|||+++.-. .++||++|||+|||+|++...+|.. .|...|+|+|+++.
T Consensus 36 g~~vyge~~~~~~~~e~r~--w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~ 113 (233)
T 4df3_A 36 GQRVYGERIFRYNGEEYRE--WNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPR 113 (233)
T ss_dssp TCCSSSCCEEEETTEEEEE--CCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHH
T ss_pred CCcccCceEEEcCCceeee--ECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHH
Confidence 33444555432 24442 3468889999987633 4789999999999999999998876 67789999999999
Q ss_pred HHHHHHHHHHhccCCCCcccceeeeeeccccc---cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCC
Q psy19 347 LVLKTQANVLHNSGNLNRELKVSPLVCNVRQL---CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQI 423 (494)
Q Consensus 347 al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l---~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~ 423 (494)
|++.+++++...+ ++..+.+|+... +...+.+|+|++|.|+.. + ...++.++.++||||
T Consensus 114 ~~~~l~~~a~~~~-------ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~------~----~~~~l~~~~r~LKpG- 175 (233)
T 4df3_A 114 VMRDLLTVVRDRR-------NIFPILGDARFPEKYRHLVEGVDGLYADVAQPE------Q----AAIVVRNARFFLRDG- 175 (233)
T ss_dssp HHHHHHHHSTTCT-------TEEEEESCTTCGGGGTTTCCCEEEEEECCCCTT------H----HHHHHHHHHHHEEEE-
T ss_pred HHHHHHHhhHhhc-------CeeEEEEeccCccccccccceEEEEEEeccCCh------h----HHHHHHHHHHhccCC-
Confidence 9999999887432 356677777654 344578999999988642 1 345777899999999
Q ss_pred cEEEEE
Q psy19 424 GRAILL 429 (494)
Q Consensus 424 G~lvll 429 (494)
|++++.
T Consensus 176 G~lvI~ 181 (233)
T 4df3_A 176 GYMLMA 181 (233)
T ss_dssp EEEEEE
T ss_pred CEEEEE
Confidence 998875
No 104
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.37 E-value=4.3e-12 Score=119.99 Aligned_cols=109 Identities=20% Similarity=0.221 Sum_probs=89.3
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|.++..++..++ .++|+|+++.+++.|++|+...+ .++.+.++|+.++++++++||+|+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~~~~D~v~ 108 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDARKLSFEDKTFDYVI 108 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC------CCceEEECchhcCCCCCCcEEEEE
Confidence 4578999999999999999888754 89999999999999999998654 246899999998877667999999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
+++|+... .. .-...+++++.++|+|| |++++..++.
T Consensus 109 ~~~~~~~~--~~----~~~~~~l~~~~~~L~~g-G~l~~~~~~~ 145 (227)
T 1ve3_A 109 FIDSIVHF--EP----LELNQVFKEVRRVLKPS-GKFIMYFTDL 145 (227)
T ss_dssp EESCGGGC--CH----HHHHHHHHHHHHHEEEE-EEEEEEEECH
T ss_pred EcCchHhC--CH----HHHHHHHHHHHHHcCCC-cEEEEEecCh
Confidence 99983321 11 11356778899999999 9999988874
No 105
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.37 E-value=4.5e-12 Score=126.75 Aligned_cols=113 Identities=11% Similarity=-0.027 Sum_probs=92.9
Q ss_pred hCCCCCCEEEEEcCCcChHHHHHH-hcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCe
Q psy19 307 ASPIPGDVFLDPMCGGGTIPVECS-LSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACV 385 (494)
Q Consensus 307 a~~~~g~~VLDP~CGSGtilIEAA-~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~ 385 (494)
....++.+|||+|||+|.+++.+| ...++..++|+|+++.+++.|++|+..+++ ..++.++++|+.+++++ ++|
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~-~~f 188 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL----AGQITLHRQDAWKLDTR-EGY 188 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT----GGGEEEEECCGGGCCCC-SCE
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECchhcCCcc-CCe
Confidence 345688999999999999999875 456788999999999999999999987654 45689999999999877 899
Q ss_pred eEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 386 DGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 386 D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
|+|+++.++..- .. ...+..+++++.++|+|| |++++..
T Consensus 189 D~v~~~~~~~~~-~~----~~~~~~~l~~~~~~Lkpg-G~l~i~~ 227 (305)
T 3ocj_A 189 DLLTSNGLNIYE-PD----DARVTELYRRFWQALKPG-GALVTSF 227 (305)
T ss_dssp EEEECCSSGGGC-CC----HHHHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred EEEEECChhhhc-CC----HHHHHHHHHHHHHhcCCC-eEEEEEe
Confidence 999999876532 22 223456788999999999 9988765
No 106
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.37 E-value=7.3e-12 Score=125.65 Aligned_cols=117 Identities=11% Similarity=-0.074 Sum_probs=92.3
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
..++.....+++.+++.+|||+|||+|.+....+...++++|+|+|+++.+++.|++|+...|+ .+++++++|+.
T Consensus 108 ~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-----~~v~~v~gDa~ 182 (298)
T 3fpf_A 108 LELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-----DGVNVITGDET 182 (298)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-----CSEEEEESCGG
T ss_pred HHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-----CCeEEEECchh
Confidence 3445555568899999999999999997753333344689999999999999999999998764 46799999999
Q ss_pred cccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 377 QLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 377 ~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+++ +++||+|+++-- ..+ +..+++++.++|||| |++++....
T Consensus 183 ~l~--d~~FDvV~~~a~-------~~d----~~~~l~el~r~LkPG-G~Lvv~~~~ 224 (298)
T 3fpf_A 183 VID--GLEFDVLMVAAL-------AEP----KRRVFRNIHRYVDTE-TRIIYRTYT 224 (298)
T ss_dssp GGG--GCCCSEEEECTT-------CSC----HHHHHHHHHHHCCTT-CEEEEEECC
T ss_pred hCC--CCCcCEEEECCC-------ccC----HHHHHHHHHHHcCCC-cEEEEEcCc
Confidence 876 578999998421 122 456777899999999 999987764
No 107
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.36 E-value=4.1e-12 Score=122.06 Aligned_cols=114 Identities=9% Similarity=0.036 Sum_probs=90.3
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcc-cceeeeeeccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRE-LKVSPLVCNVR 376 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~-~~i~~~~~Da~ 376 (494)
+...++...+.+++.+|||+|||+|..++.+|...+ +..++++|+++.+++.|++|+..+|+ . .++.++++|+.
T Consensus 44 ~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~----~~~~i~~~~gda~ 119 (221)
T 3dr5_A 44 LLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY----SPSRVRFLLSRPL 119 (221)
T ss_dssp HHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC----CGGGEEEECSCHH
T ss_pred HHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CcCcEEEEEcCHH
Confidence 334444444555556999999999999999888654 78999999999999999999998765 3 57899999998
Q ss_pred ccc--CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 377 QLC--FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 377 ~l~--~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
+.. +.+++||+|++|.+.. . |..+++.+.++|+|| |.+++
T Consensus 120 ~~l~~~~~~~fD~V~~d~~~~-------~----~~~~l~~~~~~LkpG-G~lv~ 161 (221)
T 3dr5_A 120 DVMSRLANDSYQLVFGQVSPM-------D----LKALVDAAWPLLRRG-GALVL 161 (221)
T ss_dssp HHGGGSCTTCEEEEEECCCTT-------T----HHHHHHHHHHHEEEE-EEEEE
T ss_pred HHHHHhcCCCcCeEEEcCcHH-------H----HHHHHHHHHHHcCCC-cEEEE
Confidence 762 3357899999997532 1 556777899999999 98776
No 108
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.36 E-value=1.5e-12 Score=124.83 Aligned_cols=119 Identities=18% Similarity=0.127 Sum_probs=98.5
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
+.+..+..+..++...++.+|||+|||+|.+++.++...|+..++|+|+++.+++.|++|+..+++ ..++.+.++|
T Consensus 38 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d 113 (233)
T 2gpy_A 38 MDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL----ESRIELLFGD 113 (233)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSC
T ss_pred cCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECC
Confidence 566777777777766678899999999999999999888788999999999999999999998764 3457899999
Q ss_pred cccc-cCC--CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 375 VRQL-CFK--PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 375 a~~l-~~~--~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+... +.. ++.||+|++|+|.. .+..+++.+.++|+|| |++++.
T Consensus 114 ~~~~~~~~~~~~~fD~I~~~~~~~-----------~~~~~l~~~~~~L~pg-G~lv~~ 159 (233)
T 2gpy_A 114 ALQLGEKLELYPLFDVLFIDAAKG-----------QYRRFFDMYSPMVRPG-GLILSD 159 (233)
T ss_dssp GGGSHHHHTTSCCEEEEEEEGGGS-----------CHHHHHHHHGGGEEEE-EEEEEE
T ss_pred HHHHHHhcccCCCccEEEECCCHH-----------HHHHHHHHHHHHcCCC-eEEEEE
Confidence 9874 322 46899999998743 1557778899999999 988775
No 109
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.36 E-value=7.1e-12 Score=117.73 Aligned_cols=116 Identities=14% Similarity=0.046 Sum_probs=96.9
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.+.+.++......++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++|+..+++ .++.+.++|
T Consensus 61 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d 133 (210)
T 3lbf_A 61 SQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDL-----HNVSTRHGD 133 (210)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC-----CceEEEECC
Confidence 46778888888888899999999999999999999887 68999999999999999999998764 247899999
Q ss_pred cccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 375 VRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+.......++||+|+++.++.. +. ..+.++|+|| |++++..+.
T Consensus 134 ~~~~~~~~~~~D~i~~~~~~~~-~~-------------~~~~~~L~pg-G~lv~~~~~ 176 (210)
T 3lbf_A 134 GWQGWQARAPFDAIIVTAAPPE-IP-------------TALMTQLDEG-GILVLPVGE 176 (210)
T ss_dssp GGGCCGGGCCEEEEEESSBCSS-CC-------------THHHHTEEEE-EEEEEEECS
T ss_pred cccCCccCCCccEEEEccchhh-hh-------------HHHHHhcccC-cEEEEEEcC
Confidence 9886555578999999865432 11 1377899999 999998877
No 110
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.36 E-value=9.8e-12 Score=121.62 Aligned_cols=115 Identities=20% Similarity=0.165 Sum_probs=91.7
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
..++.+|||+|||+|.+++.++..+ ..++|+|+|+.+++.|++|+..+++ . +.+.++|+... ++.++||+|
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g--~~v~gvDi~~~~v~~a~~n~~~~~~----~--v~~~~~d~~~~-~~~~~fD~V 188 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLG--GKALGVDIDPMVLPQAEANAKRNGV----R--PRFLEGSLEAA-LPFGPFDLL 188 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCGGGHHHHHHHHHHTTC----C--CEEEESCHHHH-GGGCCEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhC--CeEEEEECCHHHHHHHHHHHHHcCC----c--EEEEECChhhc-CcCCCCCEE
Confidence 4678899999999999999988874 4999999999999999999998764 1 57888898763 334689999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe---cCHHHHHHHHHhcc
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT---SDRKHLIQALHITS 444 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt---~~~~~l~~~l~~~~ 444 (494)
++|+++. .+..++..+.++|+|| |++++.. .....+.+.+...|
T Consensus 189 v~n~~~~-----------~~~~~l~~~~~~Lkpg-G~lils~~~~~~~~~v~~~l~~~G 235 (254)
T 2nxc_A 189 VANLYAE-----------LHAALAPRYREALVPG-GRALLTGILKDRAPLVREAMAGAG 235 (254)
T ss_dssp EEECCHH-----------HHHHHHHHHHHHEEEE-EEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred EECCcHH-----------HHHHHHHHHHHHcCCC-CEEEEEeeccCCHHHHHHHHHHCC
Confidence 9998642 2456778899999999 9988743 23445666777665
No 111
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.35 E-value=7.1e-12 Score=124.17 Aligned_cols=121 Identities=10% Similarity=-0.022 Sum_probs=97.4
Q ss_pred HHHHHHHHHHh----CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 297 PTIAYNMVRLA----SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 297 e~lAa~ll~la----~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
...+..++... ...++.+|||+|||+|.++..++... +..++|+|+++.+++.|++++...++ ..++.+.+
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~~~~~ 138 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGL----ADNITVKY 138 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTC----TTTEEEEE
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCC----CcceEEEE
Confidence 33445566666 77888999999999999999988764 46999999999999999999987764 35678999
Q ss_pred eccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+|+.++|+++++||+|+++-.+.. +. + ...+++++.++|+|| |++++..+
T Consensus 139 ~d~~~~~~~~~~fD~v~~~~~l~~-~~---~----~~~~l~~~~~~Lkpg-G~l~~~~~ 188 (297)
T 2o57_A 139 GSFLEIPCEDNSYDFIWSQDAFLH-SP---D----KLKVFQECARVLKPR-GVMAITDP 188 (297)
T ss_dssp CCTTSCSSCTTCEEEEEEESCGGG-CS---C----HHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cCcccCCCCCCCEeEEEecchhhh-cC---C----HHHHHHHHHHHcCCC-eEEEEEEe
Confidence 999999888789999999754331 11 2 356778999999999 99988754
No 112
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=2.8e-12 Score=123.30 Aligned_cols=111 Identities=13% Similarity=0.093 Sum_probs=86.0
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cCCCCCee
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CFKPACVD 386 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~~~~~~D 386 (494)
..++.+|||+|||+|.+++.++... ...++|+|+++.+++.|++++...+ .++.++++|+.++ ++++++||
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~fD 130 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTLPDGHFD 130 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGSCTTCEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhcC------CCeEEEecCHHHhhcccCCCceE
Confidence 4578899999999999999887643 3489999999999999999987553 3578999999988 78778999
Q ss_pred EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+|++| .|....... ....+..+++++.++|||| |+++++.
T Consensus 131 ~V~~d-~~~~~~~~~--~~~~~~~~l~~~~r~Lkpg-G~l~~~~ 170 (236)
T 1zx0_A 131 GILYD-TYPLSEETW--HTHQFNFIKNHAFRLLKPG-GVLTYCN 170 (236)
T ss_dssp EEEEC-CCCCBGGGT--TTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred EEEEC-Ccccchhhh--hhhhHHHHHHHHHHhcCCC-eEEEEEe
Confidence 99996 333211111 1233556788999999999 9987754
No 113
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.35 E-value=3.7e-12 Score=120.22 Aligned_cols=127 Identities=10% Similarity=0.084 Sum_probs=91.2
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccC-----C--CCcccc
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSG-----N--LNRELK 367 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~-----~--~~~~~~ 367 (494)
.++.+...+ ......++.+|||+|||+|..+..+|.. +..|+|+|+++.|++.|+++...... + .....+
T Consensus 7 ~~~~l~~~~-~~l~~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T 1pjz_A 7 VNKDLQQYW-SSLNVVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPG 83 (203)
T ss_dssp STHHHHHHH-HHHCCCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSS
T ss_pred CCHHHHHHH-HhcccCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCc
Confidence 344555443 3335567889999999999999999887 67999999999999999988753100 0 000135
Q ss_pred eeeeeeccccccCCC-CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 368 VSPLVCNVRQLCFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 368 i~~~~~Da~~l~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+.+.++|+.++++.+ ++||+|++.-.+.. +. ......+++++.++|||| |++++++.
T Consensus 84 v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~-l~-----~~~~~~~l~~~~r~Lkpg-G~~~l~~~ 141 (203)
T 1pjz_A 84 IEIWCGDFFALTARDIGHCAAFYDRAAMIA-LP-----ADMRERYVQHLEALMPQA-CSGLLITL 141 (203)
T ss_dssp SEEEEECCSSSTHHHHHSEEEEEEESCGGG-SC-----HHHHHHHHHHHHHHSCSE-EEEEEEEE
T ss_pred cEEEECccccCCcccCCCEEEEEECcchhh-CC-----HHHHHHHHHHHHHHcCCC-cEEEEEEE
Confidence 789999999987654 68999998654431 11 122446788999999999 99666553
No 114
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.35 E-value=1.1e-11 Score=123.49 Aligned_cols=121 Identities=18% Similarity=0.181 Sum_probs=95.3
Q ss_pred HHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC
Q psy19 301 YNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF 380 (494)
Q Consensus 301 a~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~ 380 (494)
..++......++.+|||+|||+|.+++.++..++ ..++|+|+++.+++.|++++...++ ..++.+..+|+.++
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~-- 134 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS----PRRKEVRIQGWEEF-- 134 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC----SSCEEEEECCGGGC--
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECCHHHc--
Confidence 3455666778899999999999999999988754 7999999999999999999998764 45678999999876
Q ss_pred CCCCeeEEEEcCCCccccCCccc--hHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSN--NFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~--~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+++||+|+++..+.. +..... ....+..+++++.++|+|| |++++.+.
T Consensus 135 -~~~fD~v~~~~~~~~-~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 184 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEH-FADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI 184 (302)
T ss_dssp -CCCCSEEEEESCGGG-TTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEE
T ss_pred -CCCccEEEEcchHHh-cCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEE
Confidence 479999999866542 211100 1133667888999999999 99988544
No 115
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.35 E-value=6.4e-12 Score=123.25 Aligned_cols=127 Identities=12% Similarity=0.014 Sum_probs=91.8
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhc-------cCC-C----
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHN-------SGN-L---- 362 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~-------g~~-~---- 362 (494)
..+.+...+..+....++.+|||+|||+|..++.+|.. +..|+|+|+++.|++.|+++.... ... .
T Consensus 52 ~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~ 129 (252)
T 2gb4_A 52 GHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFK 129 (252)
T ss_dssp CCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEE
T ss_pred CCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccc
Confidence 45556555555555557889999999999999999987 679999999999999998765310 000 0
Q ss_pred CcccceeeeeeccccccCCC-CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 363 NRELKVSPLVCNVRQLCFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 363 ~~~~~i~~~~~Da~~l~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....++.+.++|+.++++.+ ++||+|+++-.+.. +. ..+ ...+++++.++|||| |++++++
T Consensus 130 ~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~-l~-~~~----~~~~l~~~~~~LkpG-G~l~l~~ 191 (252)
T 2gb4_A 130 SSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVA-IN-PGD----HDRYADIILSLLRKE-FQYLVAV 191 (252)
T ss_dssp ETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTT-SC-GGG----HHHHHHHHHHTEEEE-EEEEEEE
T ss_pred cCCCceEEEECccccCCcccCCCEEEEEEhhhhhh-CC-HHH----HHHHHHHHHHHcCCC-eEEEEEE
Confidence 01245789999999997653 79999998754432 21 111 345677899999999 9987654
No 116
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.35 E-value=3.4e-11 Score=113.07 Aligned_cols=146 Identities=13% Similarity=-0.009 Sum_probs=105.6
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeE
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDG 387 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~ 387 (494)
...++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+.++. +.+..+|+..++ .+++||+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~d~~~~~-~~~~fD~ 105 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLG-----------RPVRTMLFHQLD-AIDAYDA 105 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHT-----------SCCEECCGGGCC-CCSCEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcC-----------CceEEeeeccCC-CCCcEEE
Confidence 3457889999999999999999887 6799999999999999999872 257788998887 5679999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec-----------------CHHHHHHHHHhcc-cccee
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS-----------------DRKHLIQALHITS-ALWKC 449 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~-----------------~~~~l~~~l~~~~-~l~~~ 449 (494)
|+++..+.. +. ..-...+++++.++|+|| |++++.++ +...+...+...| . ..
T Consensus 106 v~~~~~l~~-~~-----~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f--~~ 176 (211)
T 3e23_A 106 VWAHACLLH-VP-----RDELADVLKLIWRALKPG-GLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTW--AS 176 (211)
T ss_dssp EEECSCGGG-SC-----HHHHHHHHHHHHHHEEEE-EEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCC--SE
T ss_pred EEecCchhh-cC-----HHHHHHHHHHHHHhcCCC-cEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCc--EE
Confidence 999875432 11 122457788999999999 99888644 3445777777766 4 23
Q ss_pred eeeEEE----ccCCceEEEEEEeeCCCCCCC
Q psy19 450 RKQIKI----NMSGMKSFVFILNRTADLFDY 476 (494)
Q Consensus 450 ~~~~~v----~~Ggl~~~i~v~~~~~~~~d~ 476 (494)
...... ..+.....+.++.+..+.+.|
T Consensus 177 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~ 207 (211)
T 3e23_A 177 VAVESSEGKGFDQELAQFLHVSVRKPELEHH 207 (211)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECCCC---
T ss_pred EEEEeccCCCCCCCCceEEEEEEecCccccc
Confidence 222222 234446677777777766655
No 117
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.34 E-value=1.8e-12 Score=123.18 Aligned_cols=120 Identities=17% Similarity=0.100 Sum_probs=95.3
Q ss_pred cchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 294 TLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 294 ~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.+.+..+..+..++...++.+|||+|||+|.+++.+|...+ +..++|+|+++.+++.|++|+..+++ ..++.+++
T Consensus 47 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~ 122 (225)
T 3tr6_A 47 QTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL----SDKIGLRL 122 (225)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEE
T ss_pred ccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC----CCceEEEe
Confidence 35566666666666556778999999999999999998776 78999999999999999999998765 45678999
Q ss_pred eccccc-c-CCC----CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 373 CNVRQL-C-FKP----ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 373 ~Da~~l-~-~~~----~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+|+.+. + +.. ++||+|++|+|.. . |..+++.+.++|+|| |.+++-
T Consensus 123 ~d~~~~~~~~~~~~~~~~fD~v~~~~~~~-------~----~~~~l~~~~~~L~pg-G~lv~~ 173 (225)
T 3tr6_A 123 SPAKDTLAELIHAGQAWQYDLIYIDADKA-------N----TDLYYEESLKLLREG-GLIAVD 173 (225)
T ss_dssp SCHHHHHHHHHTTTCTTCEEEEEECSCGG-------G----HHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCHHHHHHHhhhccCCCCccEEEECCCHH-------H----HHHHHHHHHHhcCCC-cEEEEe
Confidence 998664 2 111 6899999998721 1 556777899999999 988773
No 118
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.34 E-value=1.1e-11 Score=119.19 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=95.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|.+++.++... ...++|+|+++.+++.|++++...+ ..++.+.++|+..+++.+++||+|+
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~ 151 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG-----KRVRNYFCCGLQDFTPEPDSYDVIW 151 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG-----GGEEEEEECCGGGCCCCSSCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC-----CceEEEEEcChhhcCCCCCCEEEEE
Confidence 357899999999999999877765 4689999999999999999987653 2356899999998887767899999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec-----------------CHHHHHHHHHhcc
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS-----------------DRKHLIQALHITS 444 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~-----------------~~~~l~~~l~~~~ 444 (494)
++-.+.. +. ...+..+++++.++|+|| |++++..+ ....+.+.+.+.|
T Consensus 152 ~~~~l~~-~~-----~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 216 (241)
T 2ex4_A 152 IQWVIGH-LT-----DQHLAEFLRRCKGSLRPN-GIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAG 216 (241)
T ss_dssp EESCGGG-SC-----HHHHHHHHHHHHHHEEEE-EEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTT
T ss_pred Ecchhhh-CC-----HHHHHHHHHHHHHhcCCC-eEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcC
Confidence 9854321 11 123567888999999999 99988543 3455777777766
No 119
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.34 E-value=5.6e-12 Score=128.81 Aligned_cols=117 Identities=15% Similarity=0.134 Sum_probs=93.5
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
.+..++.......++.+|||+|||+|.+++.++... ...++|+|+++ +++.|++|++.+++ ..++.++++|+.+
T Consensus 51 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~ 124 (340)
T 2fyt_A 51 SYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKL----EDTITLIKGKIEE 124 (340)
T ss_dssp HHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTC----TTTEEEEESCTTT
T ss_pred HHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCC----CCcEEEEEeeHHH
Confidence 344566666666788899999999999999998872 35899999997 99999999998764 4568999999999
Q ss_pred ccCCCCCeeEEEEcC-CCccccCCccchHHHHHHHHHHHhhcccCCCcEEE
Q psy19 378 LCFKPACVDGIVTDL-PFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAI 427 (494)
Q Consensus 378 l~~~~~~~D~IVtNP-PYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lv 427 (494)
+++++++||+|++++ +|..... . ....++.++.++|+|| |+++
T Consensus 125 ~~~~~~~~D~Ivs~~~~~~l~~~--~----~~~~~l~~~~~~Lkpg-G~li 168 (340)
T 2fyt_A 125 VHLPVEKVDVIISEWMGYFLLFE--S----MLDSVLYAKNKYLAKG-GSVY 168 (340)
T ss_dssp SCCSCSCEEEEEECCCBTTBTTT--C----HHHHHHHHHHHHEEEE-EEEE
T ss_pred hcCCCCcEEEEEEcCchhhccCH--H----HHHHHHHHHHhhcCCC-cEEE
Confidence 887767999999998 6654321 1 2446777899999999 9876
No 120
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.34 E-value=3.2e-12 Score=121.38 Aligned_cols=119 Identities=15% Similarity=-0.039 Sum_probs=95.4
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
+.+..+..+..++...++.+|||+|||+|..++.+|...+ +..++|+|+++.+++.|++|+..+++ ..++.++++
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~ 117 (223)
T 3duw_A 42 VSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL----NDRVEVRTG 117 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEES
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEc
Confidence 4566666666666666788999999999999999998877 78999999999999999999998765 456889999
Q ss_pred ccccc-c-CC---CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 374 NVRQL-C-FK---PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 374 Da~~l-~-~~---~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
|+.+. + +. .++||+|++|++.. .|..+++.+.++|+|| |.+++-
T Consensus 118 d~~~~~~~~~~~~~~~fD~v~~d~~~~-----------~~~~~l~~~~~~L~pg-G~lv~~ 166 (223)
T 3duw_A 118 LALDSLQQIENEKYEPFDFIFIDADKQ-----------NNPAYFEWALKLSRPG-TVIIGD 166 (223)
T ss_dssp CHHHHHHHHHHTTCCCCSEEEECSCGG-----------GHHHHHHHHHHTCCTT-CEEEEE
T ss_pred CHHHHHHHHHhcCCCCcCEEEEcCCcH-----------HHHHHHHHHHHhcCCC-cEEEEe
Confidence 99764 1 11 15799999998722 2557777899999999 977663
No 121
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.34 E-value=4.6e-11 Score=111.37 Aligned_cols=121 Identities=16% Similarity=0.090 Sum_probs=93.8
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEEEc
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVTD 391 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IVtN 391 (494)
+.+|||+|||+|.++..++.. +..++|+|+++.+++.|+++.. .+.++++|+.++++++++||+|+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHP----------SVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCT----------TSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCC----------CCeEEeCcccccccCCCCeEEEEeh
Confidence 678999999999999998887 6799999999999999998832 3578999999998777899999997
Q ss_pred CCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec------------------CHHHHHHHHHhccccceeeeeE
Q psy19 392 LPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS------------------DRKHLIQALHITSALWKCRKQI 453 (494)
Q Consensus 392 PPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~------------------~~~~l~~~l~~~~~l~~~~~~~ 453 (494)
..+..- . ..+ ...+++++.++|+|| |++++.+. ....+.+.+...| +......
T Consensus 110 ~~l~~~-~-~~~----~~~~l~~~~~~L~pg-G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~~ 180 (203)
T 3h2b_A 110 YSLIHM-G-PGE----LPDALVALRMAVEDG-GGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAG--FQVTSSH 180 (203)
T ss_dssp SSSTTC-C-TTT----HHHHHHHHHHTEEEE-EEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTT--EEEEEEE
T ss_pred hhHhcC-C-HHH----HHHHHHHHHHHcCCC-cEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCC--CcEEEEE
Confidence 654321 1 112 446777899999999 99988653 2455777777766 4544433
No 122
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.33 E-value=5.6e-12 Score=124.48 Aligned_cols=136 Identities=15% Similarity=0.085 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
+.+...++.+....++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++|+...+... ....+.+..+|+.
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~~~~d~~ 119 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEP-AFDKWVIEEANWL 119 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSH-HHHTCEEEECCGG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhccccc-ccceeeEeecChh
Confidence 445555666665567889999999999999999887 5699999999999999999986543211 1134578889998
Q ss_pred ccc---CCCCCeeEEEEc-CCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHH
Q psy19 377 QLC---FKPACVDGIVTD-LPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLI 437 (494)
Q Consensus 377 ~l~---~~~~~~D~IVtN-PPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~ 437 (494)
.++ +.+++||+|+++ ..+.. +............+++++.++|+|| |++++.+++...+.
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~-~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~ 182 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAH-LPDSKGDQSEHRLALKNIASMVRPG-GLLVIDHRNYDYIL 182 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGG-SCCSSSSSHHHHHHHHHHHHTEEEE-EEEEEEEECHHHHH
T ss_pred hCccccccCCCeEEEEEcChHHhh-cCccccCHHHHHHHHHHHHHHcCCC-eEEEEEeCCHHHHh
Confidence 887 677899999997 33332 2210000122456777999999999 99999999876443
No 123
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.33 E-value=4.6e-12 Score=123.38 Aligned_cols=119 Identities=13% Similarity=-0.015 Sum_probs=94.4
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
+.+..+..+..++...++.+|||+|||+|..++.+|...+ +..++|+|+++.+++.|++|+..+|+ ..++.+..+
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~----~~~v~~~~~ 122 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV----DQRVTLREG 122 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC----TTTEEEEES
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEc
Confidence 3455555555555556778999999999999999998876 78999999999999999999998765 456899999
Q ss_pred ccccc-cCC--CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 374 NVRQL-CFK--PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 374 Da~~l-~~~--~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
|+.+. +.. .++||+|++|.+.. . |..+++.+.++|+|| |.+++-
T Consensus 123 d~~~~l~~~~~~~~fD~V~~d~~~~-------~----~~~~l~~~~~~LkpG-G~lv~~ 169 (248)
T 3tfw_A 123 PALQSLESLGECPAFDLIFIDADKP-------N----NPHYLRWALRYSRPG-TLIIGD 169 (248)
T ss_dssp CHHHHHHTCCSCCCCSEEEECSCGG-------G----HHHHHHHHHHTCCTT-CEEEEE
T ss_pred CHHHHHHhcCCCCCeEEEEECCchH-------H----HHHHHHHHHHhcCCC-eEEEEe
Confidence 99774 322 24899999987521 1 456777899999999 987764
No 124
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.33 E-value=6.2e-12 Score=119.97 Aligned_cols=120 Identities=19% Similarity=0.139 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecc
Q psy19 297 PTIAYNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNV 375 (494)
Q Consensus 297 e~lAa~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da 375 (494)
..+...++.+.. ..++.+|||+|||+|.++..++..+|+..++|+|+++.+++.|++++...+ ++.++++|+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~d~ 101 (234)
T 3dtn_A 29 DDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-------KVKYIEADY 101 (234)
T ss_dssp HHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-------TEEEEESCT
T ss_pred HHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-------CEEEEeCch
Confidence 344455555554 567889999999999999999998888999999999999999999986432 578999999
Q ss_pred ccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 376 RQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 376 ~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.++++. ++||+|+++.++..- . . .-...+++++.++|+|| |++++...
T Consensus 102 ~~~~~~-~~fD~v~~~~~l~~~-~-~----~~~~~~l~~~~~~Lkpg-G~l~~~~~ 149 (234)
T 3dtn_A 102 SKYDFE-EKYDMVVSALSIHHL-E-D----EDKKELYKRSYSILKES-GIFINADL 149 (234)
T ss_dssp TTCCCC-SCEEEEEEESCGGGS-C-H----HHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred hccCCC-CCceEEEEeCccccC-C-H----HHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 998876 799999998765422 1 1 11335777899999999 99988763
No 125
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.33 E-value=1.8e-11 Score=117.89 Aligned_cols=114 Identities=18% Similarity=0.150 Sum_probs=93.0
Q ss_pred HHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC
Q psy19 302 NMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK 381 (494)
Q Consensus 302 ~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~ 381 (494)
-++.+..+.++.+|||+|||+|.++..++.. +..++|+|+++.+++.|++++...++ .++.+.++|+..++++
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~ 84 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGV-----ENVRFQQGTAESLPFP 84 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTC-----CSEEEEECBTTBCCSC
T ss_pred hHHHHhCcCCCCEEEEEccCcCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC-----CCeEEEecccccCCCC
Confidence 3456667789999999999999999998887 45899999999999999999987764 2478999999998887
Q ss_pred CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 382 PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 ~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+++||+|+++-.... + .+ ...++.++.++|+|| |++++...
T Consensus 85 ~~~fD~v~~~~~l~~-~---~~----~~~~l~~~~~~Lkpg-G~l~~~~~ 125 (239)
T 1xxl_A 85 DDSFDIITCRYAAHH-F---SD----VRKAVREVARVLKQD-GRFLLVDH 125 (239)
T ss_dssp TTCEEEEEEESCGGG-C---SC----HHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCcEEEEEECCchhh-c---cC----HHHHHHHHHHHcCCC-cEEEEEEc
Confidence 789999999854331 1 12 346777899999999 99988643
No 126
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.33 E-value=9.7e-12 Score=117.13 Aligned_cols=120 Identities=12% Similarity=0.042 Sum_probs=95.1
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
.++..+..+....++.+|||+|||+|.++..++.. +..++|+|+++.+++.|++++... .++.+.++|+.+
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~ 108 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRW-------SHISWAATDILQ 108 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTC-------SSEEEEECCTTT
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccC-------CCeEEEEcchhh
Confidence 55555666667778889999999999999998887 468999999999999999998743 257899999999
Q ss_pred ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 378 LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 378 l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
++ ++++||+|+++..+.. +.. ...+..++.++.++|+|| |.+++.++..
T Consensus 109 ~~-~~~~fD~v~~~~~l~~-~~~----~~~~~~~l~~~~~~L~pg-G~l~~~~~~~ 157 (216)
T 3ofk_A 109 FS-TAELFDLIVVAEVLYY-LED----MTQMRTAIDNMVKMLAPG-GHLVFGSARD 157 (216)
T ss_dssp CC-CSCCEEEEEEESCGGG-SSS----HHHHHHHHHHHHHTEEEE-EEEEEEEECH
T ss_pred CC-CCCCccEEEEccHHHh-CCC----HHHHHHHHHHHHHHcCCC-CEEEEEecCC
Confidence 87 4579999999865442 221 123456788999999999 9999877544
No 127
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.32 E-value=8.4e-12 Score=123.08 Aligned_cols=105 Identities=15% Similarity=0.114 Sum_probs=87.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVT 390 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IVt 390 (494)
++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++++..+++ ++.+.++|+..+++ +++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENL------NISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCGGGCCC-CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCC------ceEEEEeccccccc-cCCccEEEE
Confidence 6789999999999999999887 67999999999999999999997753 46899999999876 579999999
Q ss_pred cCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 391 DLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 391 NPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++++..- . ... ...+++++.++|+|| |.+++++.
T Consensus 191 ~~~~~~~-~-~~~----~~~~l~~~~~~Lkpg-G~l~i~~~ 224 (286)
T 3m70_A 191 TVVFMFL-N-RER----VPSIIKNMKEHTNVG-GYNLIVAA 224 (286)
T ss_dssp CSSGGGS-C-GGG----HHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred ccchhhC-C-HHH----HHHHHHHHHHhcCCC-cEEEEEEe
Confidence 9987522 1 122 446777899999999 99877653
No 128
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.32 E-value=6.3e-12 Score=121.58 Aligned_cols=122 Identities=14% Similarity=0.011 Sum_probs=98.2
Q ss_pred cchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 294 TLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 294 ~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
+....++..++......++.+|||+|||+|.+++.++..+ +..++|+|+++.+++.|++++... .++.+.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~ 109 (266)
T 3ujc_A 38 SGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-------NKIIFEAN 109 (266)
T ss_dssp TTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-------TTEEEEEC
T ss_pred cchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-------CCeEEEEC
Confidence 3445566777777778889999999999999999998865 679999999999999999987632 45789999
Q ss_pred ccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 374 NVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 374 Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
|+..+++++++||+|+++..+.. ++ ..-...+++++.++|+|| |++++..
T Consensus 110 d~~~~~~~~~~fD~v~~~~~l~~-~~-----~~~~~~~l~~~~~~L~pg-G~l~~~~ 159 (266)
T 3ujc_A 110 DILTKEFPENNFDLIYSRDAILA-LS-----LENKNKLFQKCYKWLKPT-GTLLITD 159 (266)
T ss_dssp CTTTCCCCTTCEEEEEEESCGGG-SC-----HHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccccCCCCCCcEEEEeHHHHHHh-cC-----hHHHHHHHHHHHHHcCCC-CEEEEEE
Confidence 99998887789999999765432 11 123567788999999999 9998875
No 129
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.32 E-value=9.3e-12 Score=118.52 Aligned_cols=138 Identities=14% Similarity=0.010 Sum_probs=100.5
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL 371 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~ 371 (494)
..+.+..+..+..++...++.+|||+|||+|.+++.+|...+ +.+|+|+|+++.+++.|++|+..+++ .++++++
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~ 115 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL----QDKVTIL 115 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEE
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC----CCceEEE
Confidence 346666777776766666778999999999999999988653 78999999999999999999998865 4568999
Q ss_pred eeccccc-cCCC-----CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe---cCHHHHHHHHHh
Q psy19 372 VCNVRQL-CFKP-----ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT---SDRKHLIQALHI 442 (494)
Q Consensus 372 ~~Da~~l-~~~~-----~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt---~~~~~l~~~l~~ 442 (494)
++|+.+. +... ++||+|++|.+... . .-+..++..+ ++|+|| |.+++-. +....+.+.+..
T Consensus 116 ~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~-------~-~~~~~~~~~~-~~Lkpg-G~lv~~~~~~~~~~~~~~~l~~ 185 (221)
T 3u81_A 116 NGASQDLIPQLKKKYDVDTLDMVFLDHWKDR-------Y-LPDTLLLEKC-GLLRKG-TVLLADNVIVPGTPDFLAYVRG 185 (221)
T ss_dssp ESCHHHHGGGTTTTSCCCCCSEEEECSCGGG-------H-HHHHHHHHHT-TCCCTT-CEEEESCCCCCCCHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhcCCCceEEEEEcCCccc-------c-hHHHHHHHhc-cccCCC-eEEEEeCCCCcchHHHHHHHhh
Confidence 9998664 3211 58999999975321 1 1133456667 999999 9887632 222335555554
Q ss_pred cc
Q psy19 443 TS 444 (494)
Q Consensus 443 ~~ 444 (494)
..
T Consensus 186 ~~ 187 (221)
T 3u81_A 186 SS 187 (221)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 130
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.5e-11 Score=122.26 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=94.7
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
.+.+...+..+.. .++.+|||+|||+|.+++.++..+ ++..++|+|+++.+++.|++++...+ +...++.++++|
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~v~~~~~d 97 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP---DTYKNVSFKISS 97 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC----CCTTEEEEECC
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc---CCCCceEEEEcC
Confidence 3455555555543 578899999999999999999765 68899999999999999999998751 113467899999
Q ss_pred cccccCCC------CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 375 VRQLCFKP------ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 375 a~~l~~~~------~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
+.++++.. ++||+|+++..+... + ...+++++.++|+|| |.+++
T Consensus 98 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-----~----~~~~l~~~~~~Lkpg-G~l~i 147 (299)
T 3g5t_A 98 SDDFKFLGADSVDKQKIDMITAVECAHWF-----D----FEKFQRSAYANLRKD-GTIAI 147 (299)
T ss_dssp TTCCGGGCTTTTTSSCEEEEEEESCGGGS-----C----HHHHHHHHHHHEEEE-EEEEE
T ss_pred HHhCCccccccccCCCeeEEeHhhHHHHh-----C----HHHHHHHHHHhcCCC-cEEEE
Confidence 99987765 799999998764422 2 456777899999999 99887
No 131
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.31 E-value=2.2e-11 Score=123.06 Aligned_cols=121 Identities=12% Similarity=0.002 Sum_probs=93.3
Q ss_pred HHhCCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCC-
Q psy19 305 RLASPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKP- 382 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~- 382 (494)
.+..+++|.+|||+|||+|+..+.+|.. .+...|+|+|+++.+++.+++|++.+|+ .++.++++|+..++...
T Consensus 96 ~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-----~~v~~~~~D~~~~~~~~~ 170 (309)
T 2b9e_A 96 MLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-----SCCELAEEDFLAVSPSDP 170 (309)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCGGGSCTTCG
T ss_pred HHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CeEEEEeCChHhcCcccc
Confidence 3457789999999999999999988865 3457999999999999999999998875 24789999998875321
Q ss_pred --CCeeEEEEcCCCc-ccc--C----------Ccc---chHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 383 --ACVDGIVTDLPFG-KRV--G----------SKS---NNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 383 --~~~D~IVtNPPYG-~r~--~----------~~~---~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
..||.|++|||+. ... . ... .+..+...+|..+.++|+ | |++++.|+.
T Consensus 171 ~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-g-G~lvYsTCs 236 (309)
T 2b9e_A 171 RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-L-QRLVYSTCS 236 (309)
T ss_dssp GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-C-CEEEEEESC
T ss_pred ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-C-CEEEEECCC
Confidence 4799999999982 111 0 011 234556778989999887 8 999987764
No 132
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.31 E-value=1.7e-11 Score=127.66 Aligned_cols=107 Identities=16% Similarity=0.060 Sum_probs=85.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCC-CeEEEEeCCHHHHHHHHHHHHhccCCCCcccc-eeeeeecccccc--CCCCCe
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPH-TFFVCGDINEKLVLKTQANVLHNSGNLNRELK-VSPLVCNVRQLC--FKPACV 385 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~-~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~-i~~~~~Da~~l~--~~~~~~ 385 (494)
++|.+|||+|||||.+++++|...++ ..|+++|+++.+++.+++|++.+++ .++ +.++++|+.++. ...+.|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl----~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI----PEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC----CGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC----CCceEEEEeCCHHHHHHHhhCCCC
Confidence 46889999999999999999986444 5899999999999999999999875 344 789999997752 123579
Q ss_pred eEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 386 DGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 386 D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
|+|++|| ||.. ..++..+.+.|++| |.+++.+.+.
T Consensus 127 D~V~lDP-~g~~-----------~~~l~~a~~~Lk~g-Gll~~t~t~~ 161 (392)
T 3axs_A 127 DYVDLDP-FGTP-----------VPFIESVALSMKRG-GILSLTATDT 161 (392)
T ss_dssp EEEEECC-SSCC-----------HHHHHHHHHHEEEE-EEEEEEECCH
T ss_pred cEEEECC-CcCH-----------HHHHHHHHHHhCCC-CEEEEEecch
Confidence 9999998 5421 24666788899998 9777765553
No 133
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.30 E-value=1.6e-11 Score=116.88 Aligned_cols=118 Identities=13% Similarity=0.104 Sum_probs=87.9
Q ss_pred cchHHHHHHHHHH--hCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee
Q psy19 294 TLKPTIAYNMVRL--ASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL 371 (494)
Q Consensus 294 ~L~e~lAa~ll~l--a~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~ 371 (494)
+.+..+++.++.. ...+++.+|||+|||+|.++..++...+...|+|+|+++.|++.+.++++.. .++.++
T Consensus 38 ~~~~~l~~~~~~~l~~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-------~~v~~~ 110 (210)
T 1nt2_A 38 PWRSKLAAMILKGHRLKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-------NNIIPL 110 (210)
T ss_dssp GGGCHHHHHHHTSCCCCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-------SSEEEE
T ss_pred hhHHHHHHHHHhhcccCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-------CCeEEE
Confidence 4555666665543 3457889999999999999998888765579999999999988777766632 135677
Q ss_pred eeccccc----cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 372 VCNVRQL----CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 372 ~~Da~~l----~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.+|+... ++. ++||+|++|.+. ... ...+++++.++|||| |++++..
T Consensus 111 ~~d~~~~~~~~~~~-~~fD~V~~~~~~------~~~----~~~~l~~~~r~Lkpg-G~l~i~~ 161 (210)
T 1nt2_A 111 LFDASKPWKYSGIV-EKVDLIYQDIAQ------KNQ----IEILKANAEFFLKEK-GEVVIMV 161 (210)
T ss_dssp CSCTTCGGGTTTTC-CCEEEEEECCCS------TTH----HHHHHHHHHHHEEEE-EEEEEEE
T ss_pred EcCCCCchhhcccc-cceeEEEEeccC------hhH----HHHHHHHHHHHhCCC-CEEEEEE
Confidence 8888764 344 789999999532 111 234577899999999 9999875
No 134
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.30 E-value=7.4e-11 Score=112.46 Aligned_cols=125 Identities=12% Similarity=0.105 Sum_probs=95.6
Q ss_pred HHHHHHHHHHhCC--CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 297 PTIAYNMVRLASP--IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 297 e~lAa~ll~la~~--~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..++..+..+... .++.+|||+|||+|.++..++.. +..++|+|+++.+++.|++++...+. ++.+.++|
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~------~~~~~~~d 92 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGL------KPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTC------CCEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCC------CeEEEecc
Confidence 3444455554432 26789999999999999998887 67899999999999999999986542 35789999
Q ss_pred cccccCCCCCeeEEEEcC-CCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHH
Q psy19 375 VRQLCFKPACVDGIVTDL-PFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHL 436 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNP-PYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l 436 (494)
+..++++ ++||+|+++. .+.. +... .-...+++++.++|+|| |.+++-+++...+
T Consensus 93 ~~~~~~~-~~fD~v~~~~~~l~~-~~~~----~~~~~~l~~~~~~L~pg-G~l~~~~~~~~~~ 148 (246)
T 1y8c_A 93 ISNLNIN-RKFDLITCCLDSTNY-IIDS----DDLKKYFKAVSNHLKEG-GVFIFDINSYYKL 148 (246)
T ss_dssp GGGCCCS-CCEEEEEECTTGGGG-CCSH----HHHHHHHHHHHTTEEEE-EEEEEEEECHHHH
T ss_pred cccCCcc-CCceEEEEcCccccc-cCCH----HHHHHHHHHHHHhcCCC-cEEEEEecCHHHH
Confidence 9998776 7899999987 5432 1111 22457788999999999 9999877766533
No 135
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.30 E-value=1.2e-11 Score=124.86 Aligned_cols=118 Identities=14% Similarity=-0.003 Sum_probs=96.9
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
..+.+.+.++..+...++.+|||+|||+|.+++.++...+ ...|+|+|+++.+++.|++|+..+|+ .++.+.++
T Consensus 59 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~-----~~v~~~~~ 133 (317)
T 1dl5_A 59 SQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-----ENVIFVCG 133 (317)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEES
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCeEEEEC
Confidence 4677888888888889999999999999999999988754 36799999999999999999998764 23789999
Q ss_pred ccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 374 NVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 374 Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
|+.+.+...++||+|++++|+.. +. +.+.++|+|| |++++.+..
T Consensus 134 d~~~~~~~~~~fD~Iv~~~~~~~-~~-------------~~~~~~Lkpg-G~lvi~~~~ 177 (317)
T 1dl5_A 134 DGYYGVPEFSPYDVIFVTVGVDE-VP-------------ETWFTQLKEG-GRVIVPINL 177 (317)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSC-CC-------------HHHHHHEEEE-EEEEEEBCB
T ss_pred ChhhccccCCCeEEEEEcCCHHH-HH-------------HHHHHhcCCC-cEEEEEECC
Confidence 99886444578999999998642 11 2477799999 999887654
No 136
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.30 E-value=4.3e-11 Score=114.37 Aligned_cols=102 Identities=20% Similarity=0.146 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+++.. ...+.++++|+..+++++++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE--------GPDLSFIKGDLSSLPFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC--------BTTEEEEECBTTBCSSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc--------cCCceEEEcchhcCCCCCCCccEEE
Confidence 46789999999999999999887 6799999999999999998752 2346899999999988778999999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
++-.+.. + .+ ...+++++.++|+|| |++++.+
T Consensus 122 ~~~~l~~-~---~~----~~~~l~~~~~~L~pg-G~l~i~~ 153 (242)
T 3l8d_A 122 AINSLEW-T---EE----PLRALNEIKRVLKSD-GYACIAI 153 (242)
T ss_dssp EESCTTS-S---SC----HHHHHHHHHHHEEEE-EEEEEEE
T ss_pred EcChHhh-c---cC----HHHHHHHHHHHhCCC-eEEEEEE
Confidence 9765442 1 22 236677899999999 9998876
No 137
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.30 E-value=9.6e-12 Score=117.25 Aligned_cols=116 Identities=14% Similarity=-0.008 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
.+..+..+..++...++.+|||+|||+|..++.++...+ +..++|+|+++.+++.|++|+..+++ ..++.++++|
T Consensus 41 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d 116 (210)
T 3c3p_A 41 DRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL----IDRVELQVGD 116 (210)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG----GGGEEEEESC
T ss_pred CHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC----CceEEEEEec
Confidence 333344443344334567999999999999999988776 78999999999999999999997754 4568899999
Q ss_pred cccc-cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 375 VRQL-CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 375 a~~l-~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
+.+. +..++ ||+|++|.+. .+ |..+++.+.++|+|| |.+++
T Consensus 117 ~~~~~~~~~~-fD~v~~~~~~-------~~----~~~~l~~~~~~Lkpg-G~lv~ 158 (210)
T 3c3p_A 117 PLGIAAGQRD-IDILFMDCDV-------FN----GADVLERMNRCLAKN-ALLIA 158 (210)
T ss_dssp HHHHHTTCCS-EEEEEEETTT-------SC----HHHHHHHHGGGEEEE-EEEEE
T ss_pred HHHHhccCCC-CCEEEEcCCh-------hh----hHHHHHHHHHhcCCC-eEEEE
Confidence 9775 43346 9999999642 11 567778899999999 98876
No 138
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.30 E-value=3.3e-11 Score=126.87 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=91.2
Q ss_pred cchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 294 TLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 294 ~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
...+.+...++. ..++.+|||+|||+|++++.+|.. +..|+|+|+++.|++.|++|+..+++ . +.++++
T Consensus 276 ~~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl----~--v~~~~~ 344 (425)
T 2jjq_A 276 YQAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNV----D--AEFEVA 344 (425)
T ss_dssp HHHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTC----C--EEEEEC
T ss_pred HHHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC----c--EEEEEC
Confidence 344555555544 457789999999999999999886 57999999999999999999998865 2 689999
Q ss_pred ccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHh
Q psy19 374 NVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHI 442 (494)
Q Consensus 374 Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~ 442 (494)
|+.++.. ..||+||+|||+. +.. ..+++.+. .|+|+ |. +++++++..+.+.+..
T Consensus 345 d~~~~~~--~~fD~Vv~dPPr~---g~~-------~~~~~~l~-~l~p~-gi-vyvsc~p~tlarDl~~ 398 (425)
T 2jjq_A 345 SDREVSV--KGFDTVIVDPPRA---GLH-------PRLVKRLN-REKPG-VI-VYVSCNPETFARDVKM 398 (425)
T ss_dssp CTTTCCC--TTCSEEEECCCTT---CSC-------HHHHHHHH-HHCCS-EE-EEEESCHHHHHHHHHH
T ss_pred ChHHcCc--cCCCEEEEcCCcc---chH-------HHHHHHHH-hcCCC-cE-EEEECChHHHHhHHhh
Confidence 9998743 2899999999963 221 12333343 48887 74 5566777666665553
No 139
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.30 E-value=1.3e-11 Score=119.28 Aligned_cols=118 Identities=11% Similarity=0.019 Sum_probs=95.3
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
.....+..++......++.+|||+|||+|.++..++..+|+..++|+|+++.+++.|+++. .++.+.++|
T Consensus 17 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d 86 (259)
T 2p35_A 17 ERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----------PNTNFGKAD 86 (259)
T ss_dssp GGGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----------TTSEEEECC
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----------CCcEEEECC
Confidence 3445556677777777888999999999999999998877889999999999999999882 135789999
Q ss_pred cccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 375 VRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+..++ ++++||+|+++..+..- .+ ...+++++.++|+|| |++++.+++
T Consensus 87 ~~~~~-~~~~fD~v~~~~~l~~~----~~----~~~~l~~~~~~L~pg-G~l~~~~~~ 134 (259)
T 2p35_A 87 LATWK-PAQKADLLYANAVFQWV----PD----HLAVLSQLMDQLESG-GVLAVQMPD 134 (259)
T ss_dssp TTTCC-CSSCEEEEEEESCGGGS----TT----HHHHHHHHGGGEEEE-EEEEEEEEC
T ss_pred hhhcC-ccCCcCEEEEeCchhhC----CC----HHHHHHHHHHhcCCC-eEEEEEeCC
Confidence 99887 56789999998765422 12 346777899999999 999988763
No 140
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.30 E-value=3e-11 Score=118.89 Aligned_cols=122 Identities=17% Similarity=0.148 Sum_probs=95.3
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-CCCCeeE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-KPACVDG 387 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-~~~~~D~ 387 (494)
..++.+|||+|||+|.++..++.. +...++|+|+++.+++.|++++...+. ..++.+.++|+..+++ .+++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~fD~ 136 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKR----RFKVFFRAQDSYGRHMDLGKEFDV 136 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCC----SSEEEEEESCTTTSCCCCSSCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCC----CccEEEEECCccccccCCCCCcCE
Confidence 457889999999999999987776 235899999999999999999986643 3467899999998876 4678999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHH
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQAL 440 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l 440 (494)
|+++..+..-... ..-...+++++.++|+|| |++++.+++...+...+
T Consensus 137 v~~~~~l~~~~~~----~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~~~~ 184 (298)
T 1ri5_A 137 ISSQFSFHYAFST----SESLDIAQRNIARHLRPG-GYFIMTVPSRDVILERY 184 (298)
T ss_dssp EEEESCGGGGGSS----HHHHHHHHHHHHHTEEEE-EEEEEEEECHHHHHHHH
T ss_pred EEECchhhhhcCC----HHHHHHHHHHHHHhcCCC-CEEEEEECCHHHHHHHH
Confidence 9998543211111 223567888999999999 99999999876554443
No 141
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.29 E-value=1.8e-11 Score=122.03 Aligned_cols=94 Identities=23% Similarity=0.283 Sum_probs=82.5
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.++..++..+.+.++.+|||+|||+|.++..++.. +..++|+|+|+.+++.|++++..++. ..++.++++|
T Consensus 12 ~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~D 85 (285)
T 1zq9_A 12 KNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPV----ASKLQVLVGD 85 (285)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTT----GGGEEEEESC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEEcc
Confidence 47889999999999989999999999999999999887 56999999999999999999975542 3467899999
Q ss_pred cccccCCCCCeeEEEEcCCCcc
Q psy19 375 VRQLCFKPACVDGIVTDLPFGK 396 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~ 396 (494)
+.+++++ .||+|++|+||..
T Consensus 86 ~~~~~~~--~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 86 VLKTDLP--FFDTCVANLPYQI 105 (285)
T ss_dssp TTTSCCC--CCSEEEEECCGGG
T ss_pred eecccch--hhcEEEEecCccc
Confidence 9987664 7999999999964
No 142
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.29 E-value=1e-11 Score=118.37 Aligned_cols=119 Identities=11% Similarity=0.062 Sum_probs=91.0
Q ss_pred cchHHHHHHHHHHh---CCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCccccee
Q psy19 294 TLKPTIAYNMVRLA---SPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVS 369 (494)
Q Consensus 294 ~L~e~lAa~ll~la---~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~ 369 (494)
|.++.+++.++... ...++.+|||+|||+|++++.++.. .+...++|+|+++.+++.+++|++.+ .++.
T Consensus 53 p~~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-------~~v~ 125 (227)
T 1g8a_A 53 PNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-------RNIV 125 (227)
T ss_dssp TTTCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-------TTEE
T ss_pred CCchhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-------CCCE
Confidence 34566777774433 3678899999999999999999876 35579999999999999999999743 3468
Q ss_pred eeeecccccc---CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 370 PLVCNVRQLC---FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 370 ~~~~Da~~l~---~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
++++|+.+.. ...++||+|++|+|. . + ....++.++.++|+|| |++++..
T Consensus 126 ~~~~d~~~~~~~~~~~~~~D~v~~~~~~------~-~---~~~~~l~~~~~~Lkpg-G~l~~~~ 178 (227)
T 1g8a_A 126 PILGDATKPEEYRALVPKVDVIFEDVAQ------P-T---QAKILIDNAEVYLKRG-GYGMIAV 178 (227)
T ss_dssp EEECCTTCGGGGTTTCCCEEEEEECCCS------T-T---HHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred EEEccCCCcchhhcccCCceEEEECCCC------H-h---HHHHHHHHHHHhcCCC-CEEEEEE
Confidence 8999998742 123589999999981 1 1 1234467899999999 9988864
No 143
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.29 E-value=4.4e-12 Score=120.78 Aligned_cols=118 Identities=15% Similarity=0.068 Sum_probs=93.9
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
+.+..+..+..++...++.+|||+|||+|.+++.++...+ +..++|+|+++.+++.|++|+..+|+ ..++.++++
T Consensus 53 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~----~~~i~~~~~ 128 (229)
T 2avd_A 53 MTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA----EHKIDLRLK 128 (229)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC----TTTEEEEES
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC----CCeEEEEEc
Confidence 4455566666666666788999999999999999998765 68999999999999999999998764 356789999
Q ss_pred ccccc--cCCC----CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 374 NVRQL--CFKP----ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 374 Da~~l--~~~~----~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
|+.+. .+.. ++||+|++|+|.. .|..+++.+.++|+|| |.+++
T Consensus 129 d~~~~~~~~~~~~~~~~~D~v~~d~~~~-----------~~~~~l~~~~~~L~pg-G~lv~ 177 (229)
T 2avd_A 129 PALETLDELLAAGEAGTFDVAVVDADKE-----------NCSAYYERCLQLLRPG-GILAV 177 (229)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEEECSCST-----------THHHHHHHHHHHEEEE-EEEEE
T ss_pred CHHHHHHHHHhcCCCCCccEEEECCCHH-----------HHHHHHHHHHHHcCCC-eEEEE
Confidence 98664 1211 5899999999821 1567777899999999 98877
No 144
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.29 E-value=3.5e-11 Score=110.27 Aligned_cols=118 Identities=16% Similarity=0.076 Sum_probs=92.9
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
..++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+.|+. .+.+.++|+..+++++++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~----------~~~~~~~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP----------EARWVVGDLSVDQISETDFDLI 111 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTSCCCCCCEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC----------CCcEEEcccccCCCCCCceeEE
Confidence 457889999999999999998887 6799999999999999998864 1478899999887766799999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC-----HHHHHHHHHhcc
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD-----RKHLIQALHITS 444 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~-----~~~l~~~l~~~~ 444 (494)
+++|+.-.... ......++..+.++|+|| |.+++..+. ...+.+.+...|
T Consensus 112 ~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~~-G~l~~~~~~~~~~~~~~~~~~l~~~G 166 (195)
T 3cgg_A 112 VSAGNVMGFLA-----EDGREPALANIHRALGAD-GRAVIGFGAGRGWVFGDFLEVAERVG 166 (195)
T ss_dssp EECCCCGGGSC-----HHHHHHHHHHHHHHEEEE-EEEEEEEETTSSCCHHHHHHHHHHHT
T ss_pred EECCcHHhhcC-----hHHHHHHHHHHHHHhCCC-CEEEEEeCCCCCcCHHHHHHHHHHcC
Confidence 99977543332 122457788999999999 999886653 334666666655
No 145
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=2.6e-11 Score=114.30 Aligned_cols=119 Identities=15% Similarity=-0.008 Sum_probs=95.9
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
..+.+++.++.++...++.+|||+|||+|.+++.++... +...++|+|+++.+++.|++|+...++ ..+.+.++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~ 135 (215)
T 2yxe_A 61 SAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-----DNVIVIVG 135 (215)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEES
T ss_pred CcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCeEEEEC
Confidence 457778888888888899999999999999999988875 447999999999999999999987764 23688899
Q ss_pred ccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 374 NVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 374 Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
|+.......++||+|+++.++..-. .++.++|+|| |++++.++..
T Consensus 136 d~~~~~~~~~~fD~v~~~~~~~~~~--------------~~~~~~L~pg-G~lv~~~~~~ 180 (215)
T 2yxe_A 136 DGTLGYEPLAPYDRIYTTAAGPKIP--------------EPLIRQLKDG-GKLLMPVGRY 180 (215)
T ss_dssp CGGGCCGGGCCEEEEEESSBBSSCC--------------HHHHHTEEEE-EEEEEEESSS
T ss_pred CcccCCCCCCCeeEEEECCchHHHH--------------HHHHHHcCCC-cEEEEEECCC
Confidence 9865322246899999998764211 2578899999 9999988764
No 146
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.29 E-value=2e-12 Score=124.55 Aligned_cols=110 Identities=16% Similarity=0.163 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCC-HHHHHHH---HHHHHhccCCCCcccceeeeeeccccccCC-CCC
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDIN-EKLVLKT---QANVLHNSGNLNRELKVSPLVCNVRQLCFK-PAC 384 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did-~~al~~A---r~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~-~~~ 384 (494)
.++.+|||+|||+|.+++.+|...++..|+|+|++ +.+++.| ++++...++ .++.+.++|+..+|.. .+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-----~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-----SNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-----SSEEEECCBTTBCCGGGTTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-----CCeEEEEcCHHHhhhhccCe
Confidence 47789999999999999999877788999999999 6666666 877776553 2478999999988632 267
Q ss_pred eeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 385 VDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 385 ~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
+|.|.+|+||+... ......+..+++++.++|||| |++++
T Consensus 98 v~~i~~~~~~~~~~---~~~~~~~~~~l~~~~r~LkpG-G~l~i 137 (225)
T 3p2e_A 98 ADSISILFPWGTLL---EYVIKPNRDILSNVADLAKKE-AHFEF 137 (225)
T ss_dssp EEEEEEESCCHHHH---HHHHTTCHHHHHHHHTTEEEE-EEEEE
T ss_pred EEEEEEeCCCcHHh---hhhhcchHHHHHHHHHhcCCC-cEEEE
Confidence 99999999987531 011111346788999999999 99988
No 147
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.28 E-value=9.4e-12 Score=120.35 Aligned_cols=109 Identities=13% Similarity=0.043 Sum_probs=85.1
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cCCCCCeeE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CFKPACVDG 387 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~~~~~~D~ 387 (494)
.+|.+|||+|||+|.++..++...+ ..++|+|+++.+++.|+++....+ ..+.++.+|+..+ ++++++||.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGSCTTCEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCC------CceEEEeehHHhhcccccccCCce
Confidence 4788999999999999988877644 589999999999999999988654 2457888888765 466789999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
|+.|+......... ......+++++.|+|||| |++++.
T Consensus 132 i~~D~~~~~~~~~~---~~~~~~~~~e~~rvLkPG-G~l~f~ 169 (236)
T 3orh_A 132 ILYDTYPLSEETWH---THQFNFIKNHAFRLLKPG-GVLTYC 169 (236)
T ss_dssp EEECCCCCBGGGTT---THHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred EEEeeeecccchhh---hcchhhhhhhhhheeCCC-CEEEEE
Confidence 99998654322111 123557788999999999 988775
No 148
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.28 E-value=5.2e-11 Score=114.63 Aligned_cols=118 Identities=11% Similarity=0.005 Sum_probs=91.6
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
....++......++.+|||+|||+|.++..++... ...++|+|+++.+++.|++++... ..+.+.++|+..+
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~ 152 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-------PVGKFILASMETA 152 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-------SEEEEEESCGGGC
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-------CceEEEEccHHHC
Confidence 33455555555678899999999999999887764 357999999999999999987632 3468999999998
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++++++||+|+++..+.. +. ..-...+++++.++|+|| |++++..+
T Consensus 153 ~~~~~~fD~v~~~~~l~~-~~-----~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 198 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIY-LT-----DADFVKFFKHCQQALTPN-GYIFFKEN 198 (254)
T ss_dssp CCCSSCEEEEEEESCGGG-SC-----HHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCCCCCeEEEEEcchhhh-CC-----HHHHHHHHHHHHHhcCCC-eEEEEEec
Confidence 877789999999764331 11 122457788999999999 99988764
No 149
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.28 E-value=1.4e-12 Score=127.00 Aligned_cols=118 Identities=20% Similarity=0.133 Sum_probs=95.3
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
+.+..+..|..++...++.+|||+|||+|..++.+|...+ +..|+|+|+++.+++.|++|+..+|+ ..++.++++
T Consensus 44 i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~g 119 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ----EHKIKLRLG 119 (242)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC----TTTEEEEES
T ss_pred cCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEc
Confidence 5566666666666656678999999999999999998765 78999999999999999999998765 456899999
Q ss_pred ccccccCC------CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 374 NVRQLCFK------PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 374 Da~~l~~~------~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
|+.+.... .++||+|++|.+. .. |..+++.+.++|+|| |.+++
T Consensus 120 da~~~l~~~~~~~~~~~fD~V~~d~~~-------~~----~~~~l~~~~~~LkpG-G~lv~ 168 (242)
T 3r3h_A 120 PALDTLHSLLNEGGEHQFDFIFIDADK-------TN----YLNYYELALKLVTPK-GLIAI 168 (242)
T ss_dssp CHHHHHHHHHHHHCSSCEEEEEEESCG-------GG----HHHHHHHHHHHEEEE-EEEEE
T ss_pred CHHHHHHHHhhccCCCCEeEEEEcCCh-------HH----hHHHHHHHHHhcCCC-eEEEE
Confidence 99775211 3689999999761 11 556777899999999 98887
No 150
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.28 E-value=4.9e-11 Score=114.03 Aligned_cols=119 Identities=20% Similarity=0.149 Sum_probs=91.3
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEEEc
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVTD 391 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IVtN 391 (494)
+.+|||+|||+|.++..++.. +..++|+|+++.+++.|++++...+ ...++.+.++|+.+++. +++||+|+++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~-~~~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSP----KAEYFSFVKEDVFTWRP-TELFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSG----GGGGEEEECCCTTTCCC-SSCEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccC----CCcceEEEECchhcCCC-CCCeeEEEEC
Confidence 349999999999999988764 7899999999999999999998543 23568899999999764 3689999998
Q ss_pred CCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec-------------CHHHHHHHHHhcc
Q psy19 392 LPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS-------------DRKHLIQALHITS 444 (494)
Q Consensus 392 PPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~-------------~~~~l~~~l~~~~ 444 (494)
..+..- . ..+ ...+++++.++|+|| |+++++.. ....+...+...|
T Consensus 140 ~~l~~~-~-~~~----~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 198 (235)
T 3lcc_A 140 VFFCAI-E-PEM----RPAWAKSMYELLKPD-GELITLMYPITDHVGGPPYKVDVSTFEEVLVPIG 198 (235)
T ss_dssp SSTTTS-C-GGG----HHHHHHHHHHHEEEE-EEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGT
T ss_pred hhhhcC-C-HHH----HHHHHHHHHHHCCCC-cEEEEEEecccccCCCCCccCCHHHHHHHHHHcC
Confidence 665421 1 112 456777899999999 99887653 2344666666655
No 151
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.28 E-value=4.3e-11 Score=117.92 Aligned_cols=118 Identities=20% Similarity=0.195 Sum_probs=91.8
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+...++......++.+|||+|||+|.+++.++... +..++|+|+++.+++.|++++...++ ..++.+.++|+.++
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSEN----LRSKRVLLAGWEQF 126 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCC----CSCEEEEESCGGGC
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCC----CCCeEEEECChhhC
Confidence 33445555667788999999999999999988544 46999999999999999999987654 34678999999876
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+ ++||+|++.-.+.. ++. .+ +..+++++.++|||| |++++.+.
T Consensus 127 ~---~~fD~v~~~~~l~~-~~~-~~----~~~~l~~~~~~Lkpg-G~l~~~~~ 169 (287)
T 1kpg_A 127 D---EPVDRIVSIGAFEH-FGH-ER----YDAFFSLAHRLLPAD-GVMLLHTI 169 (287)
T ss_dssp C---CCCSEEEEESCGGG-TCT-TT----HHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred C---CCeeEEEEeCchhh-cCh-HH----HHHHHHHHHHhcCCC-CEEEEEEe
Confidence 5 68999999754331 111 12 456777899999999 99988654
No 152
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.28 E-value=1.8e-11 Score=124.24 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=90.8
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
....+++......++.+|||+|||+|.+++.++.. +...++|+|++ .+++.|++|+..+++ .+++.++++|+.+
T Consensus 25 ~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~----~~~i~~~~~d~~~ 98 (328)
T 1g6q_1 25 SYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGF----SDKITLLRGKLED 98 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTC----TTTEEEEESCTTT
T ss_pred HHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCC----CCCEEEEECchhh
Confidence 34455555444557789999999999999998886 23589999999 599999999998765 4568899999999
Q ss_pred ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEE
Q psy19 378 LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAI 427 (494)
Q Consensus 378 l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lv 427 (494)
++++.++||+|+++++... +..... ...++..+.++|+|| |.++
T Consensus 99 ~~~~~~~~D~Ivs~~~~~~-l~~~~~----~~~~l~~~~~~Lkpg-G~li 142 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWMGYF-LLYESM----MDTVLYARDHYLVEG-GLIF 142 (328)
T ss_dssp SCCSSSCEEEEEECCCBTT-BSTTCC----HHHHHHHHHHHEEEE-EEEE
T ss_pred ccCCCCcccEEEEeCchhh-cccHHH----HHHHHHHHHhhcCCC-eEEE
Confidence 8776678999999988332 111222 345666789999999 9876
No 153
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.27 E-value=1.3e-11 Score=126.56 Aligned_cols=114 Identities=16% Similarity=0.046 Sum_probs=88.4
Q ss_pred HHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC
Q psy19 302 NMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK 381 (494)
Q Consensus 302 ~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~ 381 (494)
++.......++.+|||+|||+|.+++.++.. +...|+|+|+++ +++.|++|+..+++ .+++.++++|+.+++++
T Consensus 57 ~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~ 130 (349)
T 3q7e_A 57 SMFHNRHLFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKL----DHVVTIIKGKVEEVELP 130 (349)
T ss_dssp HHHTCHHHHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC----TTTEEEEESCTTTCCCS
T ss_pred HHHhccccCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCC----CCcEEEEECcHHHccCC
Confidence 3333333457889999999999999999887 345999999995 99999999998765 45689999999999887
Q ss_pred CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEE
Q psy19 382 PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAI 427 (494)
Q Consensus 382 ~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lv 427 (494)
+++||+|+++++... +..... ...++..+.++|+|| |.++
T Consensus 131 ~~~fD~Iis~~~~~~-l~~~~~----~~~~l~~~~r~Lkpg-G~li 170 (349)
T 3q7e_A 131 VEKVDIIISEWMGYC-LFYESM----LNTVLHARDKWLAPD-GLIF 170 (349)
T ss_dssp SSCEEEEEECCCBBT-BTBTCC----HHHHHHHHHHHEEEE-EEEE
T ss_pred CCceEEEEEcccccc-ccCchh----HHHHHHHHHHhCCCC-CEEc
Confidence 789999999986322 211222 345666899999999 9864
No 154
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.27 E-value=4.2e-11 Score=118.40 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=96.2
Q ss_pred HHHHHHHHHH-hCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 297 PTIAYNMVRL-ASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 297 e~lAa~ll~l-a~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
+.....++.. ....++.+|||+|||+|.+++.++..+| +..++|+|+++.+++.|++++...+ .++.+.++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~v~~~~~d 80 (284)
T 3gu3_A 7 DDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP------YDSEFLEGD 80 (284)
T ss_dssp HHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS------SEEEEEESC
T ss_pred hHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEcc
Confidence 3444445443 3567889999999999999999998877 4899999999999999999998543 257899999
Q ss_pred cccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 375 VRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+.+++++ ++||+|+++..+.. + .+ ...+++++.++|+|| |.+++..++
T Consensus 81 ~~~~~~~-~~fD~v~~~~~l~~-~---~~----~~~~l~~~~~~Lkpg-G~l~~~~~~ 128 (284)
T 3gu3_A 81 ATEIELN-DKYDIAICHAFLLH-M---TT----PETMLQKMIHSVKKG-GKIICFEPH 128 (284)
T ss_dssp TTTCCCS-SCEEEEEEESCGGG-C---SS----HHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred hhhcCcC-CCeeEEEECChhhc-C---CC----HHHHHHHHHHHcCCC-CEEEEEecc
Confidence 9998774 69999999876442 2 12 246777899999999 999998877
No 155
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.27 E-value=4.5e-11 Score=117.75 Aligned_cols=108 Identities=15% Similarity=0.169 Sum_probs=89.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-CCCCCeeEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-FKPACVDGIV 389 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~~~~~~D~IV 389 (494)
++.+|||+|||+|.++..++.. +..++|+|+++.+++.|++++...++ ..++.++++|+.+++ +.+++||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGV----SDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CC----GGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC----CcceEEEEcCHHHhhhhcCCCceEEE
Confidence 3679999999999999999887 67999999999999999999987653 456889999999986 6668999999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
++-.+.. + .+ ...+++++.++|+|| |++++.+++.
T Consensus 142 ~~~~l~~-~---~~----~~~~l~~~~~~Lkpg-G~l~~~~~~~ 176 (285)
T 4htf_A 142 FHAVLEW-V---AD----PRSVLQTLWSVLRPG-GVLSLMFYNA 176 (285)
T ss_dssp EESCGGG-C---SC----HHHHHHHHHHTEEEE-EEEEEEEEBH
T ss_pred ECchhhc-c---cC----HHHHHHHHHHHcCCC-eEEEEEEeCC
Confidence 9865432 1 12 246778999999999 9999887754
No 156
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.27 E-value=2e-11 Score=126.42 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=92.4
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
..+..+++......++.+|||+|||+|.+++.++... ...|+|+|++ .+++.|++|+..+++ ..++.++++|+.
T Consensus 49 ~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~----~~~v~~~~~d~~ 122 (376)
T 3r0q_C 49 DAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNL----DHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTC----TTTEEEEESCGG
T ss_pred HHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCC----CCeEEEEECchh
Confidence 3445556555566788999999999999999999873 2499999999 999999999998765 456899999999
Q ss_pred cccCCCCCeeEEEEcC-CCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 377 QLCFKPACVDGIVTDL-PFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 377 ~l~~~~~~~D~IVtNP-PYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
+++++ ++||+|++|+ +|... .... ...++..+.++|+|| |.+++
T Consensus 123 ~~~~~-~~~D~Iv~~~~~~~l~--~e~~----~~~~l~~~~~~Lkpg-G~li~ 167 (376)
T 3r0q_C 123 DISLP-EKVDVIISEWMGYFLL--RESM----FDSVISARDRWLKPT-GVMYP 167 (376)
T ss_dssp GCCCS-SCEEEEEECCCBTTBT--TTCT----HHHHHHHHHHHEEEE-EEEES
T ss_pred hcCcC-CcceEEEEcChhhccc--chHH----HHHHHHHHHhhCCCC-eEEEE
Confidence 98776 7899999998 34322 1112 345666789999999 87754
No 157
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.27 E-value=3.5e-11 Score=120.53 Aligned_cols=118 Identities=19% Similarity=0.180 Sum_probs=93.3
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
....++......++.+|||+|||+|.+++.++... ++.++|+|+++.+++.|++++...++ ..++.+.++|+.++
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDT----NRSRQVLLQGWEDF 152 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCC----SSCEEEEESCGGGC
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECChHHC
Confidence 34455555667789999999999999999988764 56999999999999999999987654 34578999999887
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+ ++||+|+++..+.. ++. .+ +..+++++.++|+|| |++++.++
T Consensus 153 ~---~~fD~v~~~~~l~~-~~~-~~----~~~~l~~~~~~Lkpg-G~l~~~~~ 195 (318)
T 2fk8_A 153 A---EPVDRIVSIEAFEH-FGH-EN----YDDFFKRCFNIMPAD-GRMTVQSS 195 (318)
T ss_dssp C---CCCSEEEEESCGGG-TCG-GG----HHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred C---CCcCEEEEeChHHh-cCH-HH----HHHHHHHHHHhcCCC-cEEEEEEe
Confidence 4 68999999865431 211 12 456778899999999 99988655
No 158
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.26 E-value=1.2e-11 Score=117.67 Aligned_cols=124 Identities=19% Similarity=0.092 Sum_probs=93.9
Q ss_pred chHHHHHHHHHHhC--CCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee
Q psy19 295 LKPTIAYNMVRLAS--PIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL 371 (494)
Q Consensus 295 L~e~lAa~ll~la~--~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~ 371 (494)
..+.+.+.++.+.. ..++.+|||+|||+|.+++.++... +...++|+|+++.+++.|++|+..++.......++.+.
T Consensus 59 ~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 138 (226)
T 1i1n_A 59 SAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLV 138 (226)
T ss_dssp CCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEE
T ss_pred cCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEE
Confidence 34555666666664 6788999999999999999888763 44699999999999999999998754200001357889
Q ss_pred eeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 372 VCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 372 ~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
++|+...+...+.||+|+++.|+.. ++..+.++|+|| |++++.++..
T Consensus 139 ~~d~~~~~~~~~~fD~i~~~~~~~~--------------~~~~~~~~Lkpg-G~lv~~~~~~ 185 (226)
T 1i1n_A 139 VGDGRMGYAEEAPYDAIHVGAAAPV--------------VPQALIDQLKPG-GRLILPVGPA 185 (226)
T ss_dssp ESCGGGCCGGGCCEEEEEECSBBSS--------------CCHHHHHTEEEE-EEEEEEESCT
T ss_pred ECCcccCcccCCCcCEEEECCchHH--------------HHHHHHHhcCCC-cEEEEEEecC
Confidence 9998876544568999999988632 123578899999 9999887653
No 159
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.26 E-value=3.7e-11 Score=114.71 Aligned_cols=114 Identities=13% Similarity=0.156 Sum_probs=91.9
Q ss_pred HHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC
Q psy19 302 NMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF 380 (494)
Q Consensus 302 ~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~ 380 (494)
.+..+....++.+|||+|||+|.++..++.. +. .++|+|+++.+++.|++++.. ..+.+.++|+..+++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~ 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD--------TGITYERADLDKLHL 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGGCCC
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhhccC
Confidence 3555566667889999999999999988877 45 899999999999999987652 246889999999887
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
++++||+|+++..+... . + ...+++++.++|+|| |++++.+++..
T Consensus 104 ~~~~fD~v~~~~~l~~~-~---~----~~~~l~~~~~~L~pg-G~l~~~~~~~~ 148 (243)
T 3bkw_A 104 PQDSFDLAYSSLALHYV-E---D----VARLFRTVHQALSPG-GHFVFSTEHPI 148 (243)
T ss_dssp CTTCEEEEEEESCGGGC-S---C----HHHHHHHHHHHEEEE-EEEEEEEECHH
T ss_pred CCCCceEEEEecccccc-c---h----HHHHHHHHHHhcCcC-cEEEEEeCCcc
Confidence 77899999998765422 1 2 346777899999999 99999887754
No 160
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.26 E-value=3.4e-11 Score=116.31 Aligned_cols=114 Identities=11% Similarity=0.133 Sum_probs=91.1
Q ss_pred HHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCC
Q psy19 303 MVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKP 382 (494)
Q Consensus 303 ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~ 382 (494)
++.+....++.+|||+|||+|.++..++...+ ..++|+|+++.+++.|++++. ...+.+.++|+..+++++
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT--------SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC--------CTTEEEEECCGGGCCCCT
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc--------cCCeEEEEcchhhCCCCC
Confidence 34444555788999999999999999988743 389999999999999999876 134689999999988877
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
++||+|+++-.+..- .+ ...+++++.++|+|| |++++.++...
T Consensus 107 ~~fD~v~~~~~l~~~----~~----~~~~l~~~~~~Lkpg-G~l~~~~~~~~ 149 (253)
T 3g5l_A 107 DAYNVVLSSLALHYI----AS----FDDICKKVYINLKSS-GSFIFSVEHPV 149 (253)
T ss_dssp TCEEEEEEESCGGGC----SC----HHHHHHHHHHHEEEE-EEEEEEEECHH
T ss_pred CCeEEEEEchhhhhh----hh----HHHHHHHHHHHcCCC-cEEEEEeCCCc
Confidence 899999998654321 22 346777899999999 99999877754
No 161
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.26 E-value=3.6e-11 Score=120.73 Aligned_cols=93 Identities=16% Similarity=0.242 Sum_probs=77.7
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.++..++..+.+.++.+|||+|||+|.++..++.. +..++|+|+|+.+++.|++|+..++. .++.++++|
T Consensus 26 ~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~-----~~v~~~~~D 98 (299)
T 2h1r_A 26 KNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGY-----NNLEVYEGD 98 (299)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTC-----CCEEC----
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEECc
Confidence 47888999999999889999999999999999998876 57999999999999999999986553 357899999
Q ss_pred cccccCCCCCeeEEEEcCCCcc
Q psy19 375 VRQLCFKPACVDGIVTDLPFGK 396 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~ 396 (494)
+..+++ .+||+|++||||..
T Consensus 99 ~~~~~~--~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 99 AIKTVF--PKFDVCTANIPYKI 118 (299)
T ss_dssp CCSSCC--CCCSEEEEECCGGG
T ss_pred hhhCCc--ccCCEEEEcCCccc
Confidence 998765 47999999999973
No 162
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.26 E-value=1.2e-10 Score=115.58 Aligned_cols=116 Identities=17% Similarity=0.057 Sum_probs=86.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-cCCCCCeeEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-CFKPACVDGIV 389 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~~~~~~~D~IV 389 (494)
.+.+|||+|||+|.++++++...+...++++|+|+.+++.|++|+...+... ...+++++.+|+... +...++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-DDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-TSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4579999999999999999877566899999999999999999986431100 134689999998874 33346899999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+|+|+.... ...+ .-..|++.+.++|+|| |.+++-+.+
T Consensus 154 ~d~~~~~~~--~~~l--~~~~~~~~~~~~L~pg-G~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGP--AVNL--FTKGFYAGIAKALKED-GIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSC--CCCC--STTHHHHHHHHHEEEE-EEEEEECCC
T ss_pred ECCCCCCCc--chhh--hHHHHHHHHHHhcCCC-cEEEEEcCC
Confidence 999974322 1111 0135666899999999 999887543
No 163
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.25 E-value=5.4e-11 Score=114.93 Aligned_cols=117 Identities=17% Similarity=0.212 Sum_probs=90.5
Q ss_pred HHHHHHHHH-HhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecc
Q psy19 297 PTIAYNMVR-LASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNV 375 (494)
Q Consensus 297 e~lAa~ll~-la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da 375 (494)
..+...++. .....++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++++. .+ ..++.+.++|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-~~-----~~~~~~~~~d~ 95 (263)
T 2yqz_A 24 GQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIA-GV-----DRKVQVVQADA 95 (263)
T ss_dssp HHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTT-TS-----CTTEEEEESCT
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh-cc-----CCceEEEEccc
Confidence 334444433 235677889999999999999998876 6799999999999999999982 21 24578999999
Q ss_pred ccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 376 RQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 376 ~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
..+++++++||+|+++-.+.. +. + ...+++++.++|+|| |.+++..
T Consensus 96 ~~~~~~~~~fD~v~~~~~l~~-~~---~----~~~~l~~~~~~L~pg-G~l~~~~ 141 (263)
T 2yqz_A 96 RAIPLPDESVHGVIVVHLWHL-VP---D----WPKVLAEAIRVLKPG-GALLEGW 141 (263)
T ss_dssp TSCCSCTTCEEEEEEESCGGG-CT---T----HHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccCCCCCCCeeEEEECCchhh-cC---C----HHHHHHHHHHHCCCC-cEEEEEe
Confidence 998877789999999865442 11 2 346777899999999 9888763
No 164
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.25 E-value=5e-11 Score=113.56 Aligned_cols=116 Identities=14% Similarity=-0.023 Sum_probs=94.4
Q ss_pred cchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 294 TLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 294 ~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
...+.+++.++..+...++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+.|+...+ ++.+.++
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-------~v~~~~~ 123 (231)
T 1vbf_A 53 TTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYN-------NIKLILG 123 (231)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCS-------SEEEEES
T ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcC-------CeEEEEC
Confidence 356778888888888889999999999999999999887 3799999999999999999998543 4688999
Q ss_pred ccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 374 NVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 374 Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
|+.......++||+|+++.++.. +. .++.++|+|| |++++.++..
T Consensus 124 d~~~~~~~~~~fD~v~~~~~~~~-~~-------------~~~~~~L~pg-G~l~~~~~~~ 168 (231)
T 1vbf_A 124 DGTLGYEEEKPYDRVVVWATAPT-LL-------------CKPYEQLKEG-GIMILPIGVG 168 (231)
T ss_dssp CGGGCCGGGCCEEEEEESSBBSS-CC-------------HHHHHTEEEE-EEEEEEECSS
T ss_pred CcccccccCCCccEEEECCcHHH-HH-------------HHHHHHcCCC-cEEEEEEcCC
Confidence 99873223468999999987542 11 2477899999 9999988754
No 165
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.25 E-value=7.2e-11 Score=122.24 Aligned_cols=110 Identities=18% Similarity=0.167 Sum_probs=89.6
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhc-----c-CCCCcccceeeeeeccccc---
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHN-----S-GNLNRELKVSPLVCNVRQL--- 378 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~-----g-~~~~~~~~i~~~~~Da~~l--- 378 (494)
..++.+|||+|||+|.+++.++... ++..++|+|+++.+++.|++|+..+ | . ...++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~---~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSP---SRSNVRFLKGFIENLATA 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSST---TCCCEEEEESCTTCGGGC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhccccc---CCCceEEEEccHHHhhhc
Confidence 4578899999999999999988764 6789999999999999999998765 3 1 114678999999887
Q ss_pred ---cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 ---CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 ---~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
++++++||+|++|..+..- . + ...+++++.++|||| |++++..
T Consensus 158 ~~~~~~~~~fD~V~~~~~l~~~-~---d----~~~~l~~~~r~Lkpg-G~l~i~~ 203 (383)
T 4fsd_A 158 EPEGVPDSSVDIVISNCVCNLS-T---N----KLALFKEIHRVLRDG-GELYFSD 203 (383)
T ss_dssp BSCCCCTTCEEEEEEESCGGGC-S---C----HHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccCCCCCCCEEEEEEccchhcC-C---C----HHHHHHHHHHHcCCC-CEEEEEE
Confidence 7777899999999876532 1 2 346777999999999 9988853
No 166
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.25 E-value=6.7e-11 Score=114.02 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=88.8
Q ss_pred HHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCC
Q psy19 303 MVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKP 382 (494)
Q Consensus 303 ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~ 382 (494)
++......++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++|+...+. ++.+.++|+.+++++
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~~~- 103 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNL------KIEFLQGDVLEIAFK- 103 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC------CCEEEESCGGGCCCC-
T ss_pred HHHHhcccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCC------ceEEEECChhhcccC-
Confidence 333344456789999999999999999887 67999999999999999999987653 367899999988765
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
++||+|++........ . ......+++++.++|+|| |.+++-.++.
T Consensus 104 ~~fD~v~~~~~~~~~~-~----~~~~~~~l~~~~~~L~pg-G~li~~~~~~ 148 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYF-D----EEDLRKLFSKVAEALKPG-GVFITDFPCW 148 (252)
T ss_dssp SCEEEEEECSSGGGGS-C----HHHHHHHHHHHHHHEEEE-EEEEEEEEC-
T ss_pred CCccEEEEcCCchhcC-C----HHHHHHHHHHHHHHcCCC-eEEEEeccch
Confidence 6899999853211111 1 123567788999999999 9988766653
No 167
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.25 E-value=2.9e-11 Score=116.16 Aligned_cols=119 Identities=19% Similarity=0.098 Sum_probs=95.6
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
....+.+++.++.+..+.++.+|||+|||+|.+++.++...+ ..++|+|+++.+++.|++|+..+++ ..+.+..
T Consensus 73 ~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~ 146 (235)
T 1jg1_A 73 TVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGV-----KNVHVIL 146 (235)
T ss_dssp EECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEE
T ss_pred eeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCC-----CCcEEEE
Confidence 345778888899988888999999999999999999988765 7899999999999999999997764 2368889
Q ss_pred eccccccCCC-CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 373 CNVRQLCFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 373 ~Da~~l~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
+|+ ..+++. ..||+|+++.+...- ...+.++|+|| |++++.+++.
T Consensus 147 ~d~-~~~~~~~~~fD~Ii~~~~~~~~--------------~~~~~~~L~pg-G~lvi~~~~~ 192 (235)
T 1jg1_A 147 GDG-SKGFPPKAPYDVIIVTAGAPKI--------------PEPLIEQLKIG-GKLIIPVGSY 192 (235)
T ss_dssp SCG-GGCCGGGCCEEEEEECSBBSSC--------------CHHHHHTEEEE-EEEEEEECSS
T ss_pred CCc-ccCCCCCCCccEEEECCcHHHH--------------HHHHHHhcCCC-cEEEEEEecC
Confidence 997 334433 359999998764311 11477899999 9999988764
No 168
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.24 E-value=1.5e-11 Score=122.26 Aligned_cols=126 Identities=9% Similarity=0.101 Sum_probs=95.2
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
...+..++......++ +|||+|||+|.++..++.. +..++|+|+++.+++.|++++...+. .+..++.++++|+.
T Consensus 69 ~~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 69 TSEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPA--DVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCH--HHHTTEEEEECBTT
T ss_pred cHHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhccc--ccccceEEEeCchh
Confidence 3445556666665444 8999999999999999887 67899999999999999999986542 11145789999999
Q ss_pred cccCCCCCeeEEEEcCC-CccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHH
Q psy19 377 QLCFKPACVDGIVTDLP-FGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKH 435 (494)
Q Consensus 377 ~l~~~~~~~D~IVtNPP-YG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~ 435 (494)
++++ +++||+|++... +. .. . ......+++++.++|+|| |++++.+++...
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~-~~-~----~~~~~~~l~~~~~~L~pg-G~l~~~~~~~~~ 195 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSIN-EL-D----EADRRGLYASVREHLEPG-GKFLLSLAMSEA 195 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHT-TS-C----HHHHHHHHHHHHHHEEEE-EEEEEEEECCHH
T ss_pred cCCc-CCCcCEEEECCcccc-cC-C----HHHHHHHHHHHHHHcCCC-cEEEEEeecCcc
Confidence 9887 579999987421 11 11 1 122457788999999999 999998887653
No 169
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.24 E-value=1.1e-10 Score=116.98 Aligned_cols=115 Identities=10% Similarity=0.040 Sum_probs=82.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-cCCCCCeeEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-CFKPACVDGIV 389 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~~~~~~~D~IV 389 (494)
...+|||+|||+|.++.+++...+...|+++|+|+.+++.|++|+...+...-...+++++.+|+... ....++||+||
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 45799999999999999999876677899999999999999999876431101124678999998875 33346899999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+|+|.... ....+ ....|++.+.++|+|| |.+++-+
T Consensus 163 ~D~~~p~~--~~~~l--~~~~f~~~~~~~Lkpg-G~lv~~~ 198 (294)
T 3adn_A 163 SDCTDPIG--PGESL--FTSAFYEGCKRCLNPG-GIFVAQN 198 (294)
T ss_dssp ECC--------------CCHHHHHHHHHTEEEE-EEEEEEE
T ss_pred ECCCCccC--cchhc--cHHHHHHHHHHhcCCC-CEEEEec
Confidence 99874321 11111 1145777899999999 9988865
No 170
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.24 E-value=1.2e-10 Score=117.02 Aligned_cols=117 Identities=13% Similarity=0.059 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--CCCCee
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF--KPACVD 386 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~--~~~~~D 386 (494)
..++.+|||+|||+|.++.+++...+...++++|+|+.+++.|++++...... ....++.++.+|+..++. .+++||
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRS-LADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHHHHhccCCcee
Confidence 34668999999999999999997766679999999999999999988431100 113467899999988743 357899
Q ss_pred EEEEcCCCccccCCccchHHHH-HHHHHHHhhcccCCCcEEEEEecC
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLY-RLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly-~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+||+|+|+... . ...+| ..|++.+.++|+|| |.+++.+..
T Consensus 172 vIi~d~~~~~~--~---~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~~ 212 (304)
T 3bwc_A 172 VVIIDTTDPAG--P---ASKLFGEAFYKDVLRILKPD-GICCNQGES 212 (304)
T ss_dssp EEEEECC--------------CCHHHHHHHHHHEEEE-EEEEEEECC
T ss_pred EEEECCCCccc--c---chhhhHHHHHHHHHHhcCCC-cEEEEecCC
Confidence 99999986421 1 12233 56778999999999 999887654
No 171
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.24 E-value=6.8e-11 Score=110.15 Aligned_cols=105 Identities=15% Similarity=0.047 Sum_probs=86.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++ +|||+|||+|.++..++.. +..++|+|+++.+++.|++++...+. ++.+.++|+..+++++++||+|+
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~~~fD~v~ 99 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGV------KITTVQSNLADFDIVADAWEGIV 99 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTC------CEEEECCBTTTBSCCTTTCSEEE
T ss_pred CCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCC------ceEEEEcChhhcCCCcCCccEEE
Confidence 456 9999999999999988876 67999999999999999999987643 46789999998887778999999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
++..+- . ......+++++.++|+|| |++++.+..
T Consensus 100 ~~~~~~----~----~~~~~~~l~~~~~~L~pg-G~l~~~~~~ 133 (202)
T 2kw5_A 100 SIFCHL----P----SSLRQQLYPKVYQGLKPG-GVFILEGFA 133 (202)
T ss_dssp EECCCC----C----HHHHHHHHHHHHTTCCSS-EEEEEEEEC
T ss_pred EEhhcC----C----HHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence 974321 1 123457788999999999 999988653
No 172
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.24 E-value=2.9e-11 Score=115.02 Aligned_cols=122 Identities=14% Similarity=0.153 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHh--CCCCCCEEEEEcCCcChHHHHHHhcC-----CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccce
Q psy19 296 KPTIAYNMVRLA--SPIPGDVFLDPMCGGGTIPVECSLSY-----PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKV 368 (494)
Q Consensus 296 ~e~lAa~ll~la--~~~~g~~VLDP~CGSGtilIEAA~~~-----~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i 368 (494)
.+.+.+.++.+. ...++.+|||+|||+|.+++.++... +...++|+|+++.+++.|++|+...++......++
T Consensus 63 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 142 (227)
T 2pbf_A 63 APHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp CHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTE
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCE
Confidence 445556666665 57788999999999999999988874 34699999999999999999998765100001357
Q ss_pred eeeeecccccc----CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 369 SPLVCNVRQLC----FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 369 ~~~~~Da~~l~----~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
.+.++|+.... ...++||+|+++.++.. +++.+.++|+|| |++++.++.
T Consensus 143 ~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~--------------~~~~~~~~Lkpg-G~lv~~~~~ 195 (227)
T 2pbf_A 143 KIIHKNIYQVNEEEKKELGLFDAIHVGASASE--------------LPEILVDLLAEN-GKLIIPIEE 195 (227)
T ss_dssp EEEECCGGGCCHHHHHHHCCEEEEEECSBBSS--------------CCHHHHHHEEEE-EEEEEEEEE
T ss_pred EEEECChHhcccccCccCCCcCEEEECCchHH--------------HHHHHHHhcCCC-cEEEEEEcc
Confidence 89999998754 34468999999987642 123578899999 999887764
No 173
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.24 E-value=1.1e-10 Score=105.82 Aligned_cols=144 Identities=18% Similarity=0.130 Sum_probs=102.3
Q ss_pred HHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCC
Q psy19 304 VRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPA 383 (494)
Q Consensus 304 l~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~ 383 (494)
+......++.+|||+|||+|.++..++..+ ..++|+|+++.+++.|+++. .++.+.++| ++++++
T Consensus 10 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~----------~~v~~~~~d---~~~~~~ 74 (170)
T 3i9f_A 10 LPNIFEGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF----------DSVITLSDP---KEIPDN 74 (170)
T ss_dssp HHHHHSSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC----------TTSEEESSG---GGSCTT
T ss_pred HHhcCcCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC----------CCcEEEeCC---CCCCCC
Confidence 334456678899999999999999998874 48999999999999999981 135788888 566678
Q ss_pred CeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC---------------HHHHHHHHHhccccce
Q psy19 384 CVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD---------------RKHLIQALHITSALWK 448 (494)
Q Consensus 384 ~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~---------------~~~l~~~l~~~~~l~~ 448 (494)
+||+|+++..+..- .+ ...+++++.++|+|| |++++.... ...+.+.+. | |.
T Consensus 75 ~~D~v~~~~~l~~~----~~----~~~~l~~~~~~L~pg-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--G--f~ 141 (170)
T 3i9f_A 75 SVDFILFANSFHDM----DD----KQHVISEVKRILKDD-GRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--N--FV 141 (170)
T ss_dssp CEEEEEEESCSTTC----SC----HHHHHHHHHHHEEEE-EEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--T--EE
T ss_pred ceEEEEEccchhcc----cC----HHHHHHHHHHhcCCC-CEEEEEEcCccccccCchHhhhcCHHHHHHHHh--C--cE
Confidence 99999998765422 12 346777899999999 999887542 223444444 3 34
Q ss_pred eeeeEEEccCCceEEEEEEeeCCCCCCCcc
Q psy19 449 CRKQIKINMSGMKSFVFILNRTADLFDYAI 478 (494)
Q Consensus 449 ~~~~~~v~~Ggl~~~i~v~~~~~~~~d~~~ 478 (494)
..+. ..-+-..+.+++.....++.|+-
T Consensus 142 ~~~~---~~~~~~~~~l~~~~~~~~~~~~~ 168 (170)
T 3i9f_A 142 VEKR---FNPTPYHFGLVLKRKTSEGHHHH 168 (170)
T ss_dssp EEEE---ECSSTTEEEEEEEECCCCSCCCC
T ss_pred EEEc---cCCCCceEEEEEecCCCCccccc
Confidence 3332 22233456777777777766653
No 174
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.23 E-value=3.7e-11 Score=126.62 Aligned_cols=121 Identities=14% Similarity=0.018 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHH-------HHHHHhccCCCCcccce
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKT-------QANVLHNSGNLNRELKV 368 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~A-------r~Nl~~~g~~~~~~~~i 368 (494)
.+.+++.|+..+.+.++.+|||+|||+|.+++.+|...+...++|+|+++.+++.| ++|+...|+. ..++
T Consensus 227 ~p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~---~~nV 303 (433)
T 1u2z_A 227 LPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR---LNNV 303 (433)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC---CCCE
T ss_pred cHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC---CCce
Confidence 37788889999999999999999999999999999876556899999999999999 8999877631 1357
Q ss_pred eeeeeccccc--cC--CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 369 SPLVCNVRQL--CF--KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 369 ~~~~~Da~~l--~~--~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
.++++|.... ++ ..+.||+|++|.... . .+ ...+|.++.++|+|| |++++.
T Consensus 304 ~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~---~--~d----~~~~L~el~r~LKpG-G~lVi~ 358 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELIPQCDVILVNNFLF---D--ED----LNKKVEKILQTAKVG-CKIISL 358 (433)
T ss_dssp EEEESSCSTTCHHHHHHGGGCSEEEECCTTC---C--HH----HHHHHHHHHTTCCTT-CEEEES
T ss_pred EEEEcCccccccccccccCCCCEEEEeCccc---c--cc----HHHHHHHHHHhCCCC-eEEEEe
Confidence 7888765432 11 136899999985431 1 12 335567899999999 997765
No 175
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.23 E-value=2.3e-11 Score=118.64 Aligned_cols=117 Identities=13% Similarity=0.006 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
.+..+..+..++...++.+|||+|||+|..++.+|...+ +..++++|+++.+++.|++|+..+|+ ..++.++.+|
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~i~~~~gd 139 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV----DHKIDFREGP 139 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC----GGGEEEEESC
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCeEEEECC
Confidence 444454444444445667999999999999999998766 78999999999999999999998764 4578999999
Q ss_pred cccc-c-C-----CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 375 VRQL-C-F-----KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 375 a~~l-~-~-----~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
+.+. + + ..++||+|++|.+. . .|..+++.+.++|+|| |.+++
T Consensus 140 a~~~l~~l~~~~~~~~~fD~V~~d~~~-------~----~~~~~l~~~~~~LkpG-G~lv~ 188 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHGSYDFIFVDADK-------D----NYLNYHKRLIDLVKVG-GVIGY 188 (247)
T ss_dssp HHHHHHHHHHSGGGTTCBSEEEECSCS-------T----THHHHHHHHHHHBCTT-CCEEE
T ss_pred HHHHHHHHHhccCCCCCEEEEEEcCch-------H----HHHHHHHHHHHhCCCC-eEEEE
Confidence 8764 3 2 14689999998652 1 1567778899999999 98776
No 176
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.23 E-value=6.8e-11 Score=111.15 Aligned_cols=108 Identities=17% Similarity=0.085 Sum_probs=82.8
Q ss_pred HHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc---
Q psy19 302 NMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--- 378 (494)
Q Consensus 302 ~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--- 378 (494)
.++......++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+++ . .+.+..+|+..+
T Consensus 43 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~---~--------~~~~~~~~~~~~~~~ 109 (227)
T 3e8s_A 43 AILLAILGRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA---G--------AGEVHLASYAQLAEA 109 (227)
T ss_dssp HHHHHHHHTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT---C--------SSCEEECCHHHHHTT
T ss_pred HHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh---c--------ccccchhhHHhhccc
Confidence 3444444456689999999999999998877 67999999999999999987 1 135777787776
Q ss_pred cCCC-CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 379 CFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 379 ~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
++.. .+||+|+++..+. .. + ...+++++.++|+|| |++++.+++
T Consensus 110 ~~~~~~~fD~v~~~~~l~--~~---~----~~~~l~~~~~~L~pg-G~l~~~~~~ 154 (227)
T 3e8s_A 110 KVPVGKDYDLICANFALL--HQ---D----IIELLSAMRTLLVPG-GALVIQTLH 154 (227)
T ss_dssp CSCCCCCEEEEEEESCCC--SS---C----CHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred ccccCCCccEEEECchhh--hh---h----HHHHHHHHHHHhCCC-eEEEEEecC
Confidence 4333 4599999998766 21 2 235677899999999 999997763
No 177
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.23 E-value=5.1e-11 Score=123.65 Aligned_cols=104 Identities=17% Similarity=0.096 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhc---------------cCCCCcccceeeeeecc
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHN---------------SGNLNRELKVSPLVCNV 375 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~---------------g~~~~~~~~i~~~~~Da 375 (494)
++.+|||+|||+|.+++++|...++..|+++|+|+.+++.|++|++.+ ++ . .+.++++|+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl----~-~i~v~~~Da 121 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE----K-TIVINHDDA 121 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS----S-EEEEEESCH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC----C-ceEEEcCcH
Confidence 678999999999999999998866678999999999999999999988 53 2 278999999
Q ss_pred ccccC-CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 376 RQLCF-KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 376 ~~l~~-~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
..+.. ....||+|+.|||+. ...++..+.+.|++| |.+++.+.+
T Consensus 122 ~~~~~~~~~~fD~I~lDP~~~------------~~~~l~~a~~~lk~g-G~l~vt~td 166 (378)
T 2dul_A 122 NRLMAERHRYFHFIDLDPFGS------------PMEFLDTALRSAKRR-GILGVTATD 166 (378)
T ss_dssp HHHHHHSTTCEEEEEECCSSC------------CHHHHHHHHHHEEEE-EEEEEEECC
T ss_pred HHHHHhccCCCCEEEeCCCCC------------HHHHHHHHHHhcCCC-CEEEEEeec
Confidence 87631 135799999998642 125666788999998 977665443
No 178
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.23 E-value=2.2e-11 Score=119.81 Aligned_cols=110 Identities=17% Similarity=0.157 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
+.+...|..... .+.+|||+|||+|.++..++.. +..|+|+|+++.|++.|+++ .++.+.++|+.
T Consensus 27 ~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~~-----------~~v~~~~~~~e 91 (257)
T 4hg2_A 27 RALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALRH-----------PRVTYAVAPAE 91 (257)
T ss_dssp HHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCCC-----------TTEEEEECCTT
T ss_pred HHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhhc-----------CCceeehhhhh
Confidence 455555655553 4568999999999999988877 57899999999999876531 24689999999
Q ss_pred cccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 377 QLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 377 ~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++++++++||+|++.--+. ..+ ...+++++.|+|||| |.+++++.
T Consensus 92 ~~~~~~~sfD~v~~~~~~h-----~~~----~~~~~~e~~rvLkpg-G~l~~~~~ 136 (257)
T 4hg2_A 92 DTGLPPASVDVAIAAQAMH-----WFD----LDRFWAELRRVARPG-AVFAAVTY 136 (257)
T ss_dssp CCCCCSSCEEEEEECSCCT-----TCC----HHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred hhcccCCcccEEEEeeehh-----Hhh----HHHHHHHHHHHcCCC-CEEEEEEC
Confidence 9999889999999964432 112 235777999999999 99988764
No 179
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.22 E-value=4.8e-11 Score=111.45 Aligned_cols=110 Identities=16% Similarity=0.073 Sum_probs=85.0
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeE
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDG 387 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~ 387 (494)
...++.+|||+|||+|.+.+.++.. ++..++|+|+++.+++.|++++...+. ++.+.++|+.++++++++||+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~~~fD~ 92 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNF------KLNISKGDIRKLPFKDESMSF 92 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTC------CCCEEECCTTSCCSCTTCEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCC------ceEEEECchhhCCCCCCceeE
Confidence 3456789999999999985544333 367999999999999999999986542 357899999998877789999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
|+++..+.. +. ..-...+++++.++|+|| |++++...
T Consensus 93 v~~~~~l~~-~~-----~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 129 (209)
T 2p8j_A 93 VYSYGTIFH-MR-----KNDVKEAIDEIKRVLKPG-GLACINFL 129 (209)
T ss_dssp EEECSCGGG-SC-----HHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred EEEcChHHh-CC-----HHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 999754321 11 122557788999999999 99888654
No 180
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.22 E-value=3e-11 Score=113.88 Aligned_cols=104 Identities=10% Similarity=0.103 Sum_probs=83.8
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
..++.+|||+|||+|.++..++.. +..++|+|+++.+++.|++++. .++.+.++|+.+++++ ++||+|
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~~~~~-~~fD~v 110 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLSFEVP-TSIDTI 110 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSSCCCC-SCCSEE
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhhcCCC-CCeEEE
Confidence 347889999999999999998887 6799999999999999998865 2357899999998877 899999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+++..+.. +. + .....+++++.++|+|| |.+++..+
T Consensus 111 ~~~~~l~~-~~---~--~~~~~~l~~~~~~Lkpg-G~l~i~~~ 146 (220)
T 3hnr_A 111 VSTYAFHH-LT---D--DEKNVAIAKYSQLLNKG-GKIVFADT 146 (220)
T ss_dssp EEESCGGG-SC---H--HHHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred EECcchhc-CC---h--HHHHHHHHHHHHhcCCC-CEEEEEec
Confidence 99865432 11 1 11234778999999999 99998754
No 181
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.22 E-value=6.5e-11 Score=121.14 Aligned_cols=118 Identities=13% Similarity=0.135 Sum_probs=91.2
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
.....+++......++.+|||+|||+|.+++.++.. +...|+|+|+++ +++.|+++++.+++ ..++.++++|+.
T Consensus 36 ~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l----~~~v~~~~~d~~ 109 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL----TDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC----TTTEEEEESCTT
T ss_pred HHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCC----CCcEEEEEcchh
Confidence 345566666666668899999999999999998876 346999999996 88999999998764 456899999999
Q ss_pred cccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 377 QLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 377 ~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
+++++ ++||+||+++++..-. . .. +..++..+.++|+|| |.+++
T Consensus 110 ~~~~~-~~~D~Ivs~~~~~~~~-~-~~----~~~~l~~~~~~Lkpg-G~li~ 153 (348)
T 2y1w_A 110 EVSLP-EQVDIIISEPMGYMLF-N-ER----MLESYLHAKKYLKPS-GNMFP 153 (348)
T ss_dssp TCCCS-SCEEEEEECCCBTTBT-T-TS----HHHHHHHGGGGEEEE-EEEES
T ss_pred hCCCC-CceeEEEEeCchhcCC-h-HH----HHHHHHHHHhhcCCC-eEEEE
Confidence 88765 6899999998843221 1 12 234455789999999 98764
No 182
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.22 E-value=2.2e-11 Score=115.12 Aligned_cols=118 Identities=16% Similarity=0.153 Sum_probs=87.1
Q ss_pred hCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCee
Q psy19 307 ASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVD 386 (494)
Q Consensus 307 a~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D 386 (494)
....++.+|||+|||+|.+++.++..+|+..++|+|+++.|++.+.++++......+. .++.+.++|+.++++.++. |
T Consensus 23 l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d 100 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-G 100 (218)
T ss_dssp HHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-E
T ss_pred hhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-C
Confidence 3456888999999999999999999988899999999999988755554321101111 3578999999999887666 9
Q ss_pred EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.|....||...... ...-...+++++.++|||| |++++..
T Consensus 101 ~v~~~~~~~~~~~~---~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 140 (218)
T 3mq2_A 101 ELHVLMPWGSLLRG---VLGSSPEMLRGMAAVCRPG-ASFLVAL 140 (218)
T ss_dssp EEEEESCCHHHHHH---HHTSSSHHHHHHHHTEEEE-EEEEEEE
T ss_pred EEEEEccchhhhhh---hhccHHHHHHHHHHHcCCC-cEEEEEe
Confidence 98888887542100 0000146778999999999 9988854
No 183
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=3.1e-11 Score=117.80 Aligned_cols=115 Identities=21% Similarity=0.244 Sum_probs=94.1
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.++..++......++.+|||+|||+|.+++.++. ++..++|+|+++.+++.|+.+. ++.+.++|
T Consensus 18 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~d 84 (261)
T 3ege_A 18 PDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP-----------QVEWFTGY 84 (261)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT-----------TEEEECCC
T ss_pred ccHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc-----------CCEEEECc
Confidence 4456888888888888899999999999999999887 4789999999999988776543 35789999
Q ss_pred cccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 375 VRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+.++++++++||+|+++..+..- .+ ...+++++.++|| | |++++++.+
T Consensus 85 ~~~~~~~~~~fD~v~~~~~l~~~----~~----~~~~l~~~~~~Lk-g-G~~~~~~~~ 132 (261)
T 3ege_A 85 AENLALPDKSVDGVISILAIHHF----SH----LEKSFQEMQRIIR-D-GTIVLLTFD 132 (261)
T ss_dssp TTSCCSCTTCBSEEEEESCGGGC----SS----HHHHHHHHHHHBC-S-SCEEEEEEC
T ss_pred hhhCCCCCCCEeEEEEcchHhhc----cC----HHHHHHHHHHHhC-C-cEEEEEEcC
Confidence 99988877899999998765422 22 3467778999999 9 988887765
No 184
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.21 E-value=4.2e-11 Score=119.28 Aligned_cols=120 Identities=17% Similarity=0.081 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCC----------------------------
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGN---------------------------- 361 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~---------------------------- 361 (494)
.++.+|||+|||+|.+++.+|..++...|+|+|+++.+++.|++|+...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 3678999999999999999999888889999999999999999998765421
Q ss_pred -------------------------CCcccceeeeeecccccc-----CCCCCeeEEEEcCCCccccCCccchHHHHHHH
Q psy19 362 -------------------------LNRELKVSPLVCNVRQLC-----FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLF 411 (494)
Q Consensus 362 -------------------------~~~~~~i~~~~~Da~~l~-----~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~f 411 (494)
.....++.+.++|+...+ +..++||+|+++-.... +. ......-...+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~-ih-l~~~~~~~~~~ 202 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKW-VH-LNWGDEGLKRM 202 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHH-HH-HHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHH-hh-hcCCHHHHHHH
Confidence 001146889999987543 35679999999643200 00 00012235678
Q ss_pred HHHHhhcccCCCcEEEEEecC
Q psy19 412 LIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 412 L~~l~rvLkpg~G~lvllt~~ 432 (494)
++++.++|+|| |++++....
T Consensus 203 l~~~~~~LkpG-G~lil~~~~ 222 (292)
T 3g07_A 203 FRRIYRHLRPG-GILVLEPQP 222 (292)
T ss_dssp HHHHHHHEEEE-EEEEEECCC
T ss_pred HHHHHHHhCCC-cEEEEecCC
Confidence 88999999999 998886543
No 185
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=3.2e-11 Score=118.65 Aligned_cols=111 Identities=17% Similarity=0.264 Sum_probs=88.9
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC 379 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~ 379 (494)
+..++......++.+|||+|||+|.++..++. ++..++|+|+++.+++.|+.++. ++.+.++|+..++
T Consensus 46 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~ 113 (279)
T 3ccf_A 46 GEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYP----------HLHFDVADARNFR 113 (279)
T ss_dssp CCHHHHHHCCCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCT----------TSCEEECCTTTCC
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCC----------CCEEEECChhhCC
Confidence 33455666677889999999999999999887 57899999999999999998751 2468899999887
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+ +++||+|+++..+.. +. + ...+++++.++|+|| |++++.++.
T Consensus 114 ~-~~~fD~v~~~~~l~~-~~---d----~~~~l~~~~~~Lkpg-G~l~~~~~~ 156 (279)
T 3ccf_A 114 V-DKPLDAVFSNAMLHW-VK---E----PEAAIASIHQALKSG-GRFVAEFGG 156 (279)
T ss_dssp C-SSCEEEEEEESCGGG-CS---C----HHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred c-CCCcCEEEEcchhhh-Cc---C----HHHHHHHHHHhcCCC-cEEEEEecC
Confidence 6 479999999876542 11 2 236777899999999 999987764
No 186
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.21 E-value=4.7e-13 Score=130.15 Aligned_cols=123 Identities=11% Similarity=0.093 Sum_probs=92.1
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
+.+.++..++..+...++.+|||+|||+|.++..++.. +..++|+|+|+.+++.|++|+.. ..++.++++|
T Consensus 13 ~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~~-------~~~v~~~~~D 83 (245)
T 1yub_A 13 TSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLKL-------NTRVTLIHQD 83 (245)
T ss_dssp CCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTTT-------CSEEEECCSC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECC
Confidence 45667788888888888999999999999999999887 47999999999999999888751 2457899999
Q ss_pred cccccCCC-CCeeEEEEcCCCccccCCccchHHHHH------HHH----HHHhhcccCCCcEEEEEec
Q psy19 375 VRQLCFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYR------LFL----IEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 375 a~~l~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~------~fL----~~l~rvLkpg~G~lvllt~ 431 (494)
+.+++++. ++| .||+||||.... ..+..+.. .++ +.+.++|+|| |++++++.
T Consensus 84 ~~~~~~~~~~~f-~vv~n~Py~~~~---~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~-G~l~v~~~ 146 (245)
T 1yub_A 84 ILQFQFPNKQRY-KIVGNIPYHLST---QIIKKVVFESRASDIYLIVEEGFYKRTLDIH-RTLGLLLH 146 (245)
T ss_dssp CTTTTCCCSSEE-EEEEECCSSSCH---HHHHHHHHHCCCEEEEEEEESSHHHHHHCGG-GSHHHHTT
T ss_pred hhhcCcccCCCc-EEEEeCCccccH---HHHHHHHhCCCCCeEEEEeeHHHHHHHhCCC-Cchhhhhe
Confidence 99987653 578 899999998532 11111110 112 4467777777 76665543
No 187
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.21 E-value=4.2e-11 Score=115.80 Aligned_cols=118 Identities=13% Similarity=0.004 Sum_probs=93.1
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
.+..+..+..++...++.+|||+|||+|..++.+|...+ +..++++|+++.+++.|++|+..+|+ ..++.++++|
T Consensus 55 ~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~gd 130 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV----EHKINFIESD 130 (237)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESC
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcC
Confidence 445555555555555677999999999999999988766 78999999999999999999998764 4568999999
Q ss_pred cccc-c-C-----CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 375 VRQL-C-F-----KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 375 a~~l-~-~-----~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+.+. + + ..++||+|++|.+- . .|..+++.+.++|+|| |.+++-
T Consensus 131 a~~~l~~l~~~~~~~~~fD~I~~d~~~-------~----~~~~~l~~~~~~L~pG-G~lv~d 180 (237)
T 3c3y_A 131 AMLALDNLLQGQESEGSYDFGFVDADK-------P----NYIKYHERLMKLVKVG-GIVAYD 180 (237)
T ss_dssp HHHHHHHHHHSTTCTTCEEEEEECSCG-------G----GHHHHHHHHHHHEEEE-EEEEEE
T ss_pred HHHHHHHHHhccCCCCCcCEEEECCch-------H----HHHHHHHHHHHhcCCC-eEEEEe
Confidence 8765 2 2 14689999998641 1 2667788899999999 987764
No 188
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.20 E-value=4.7e-11 Score=114.93 Aligned_cols=119 Identities=14% Similarity=0.023 Sum_probs=92.7
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
+.+..+..+..++...++.+|||+|||+|..++.+|...+ +..++++|+++.+++.|++|+..+|+ ..++.+..+
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~~ 131 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV----AEKISLRLG 131 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEES
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEc
Confidence 3455555555555545677999999999999999998765 67999999999999999999998764 456889999
Q ss_pred ccccc----cCCC--CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 374 NVRQL----CFKP--ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 374 Da~~l----~~~~--~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
|+.+. +..+ ++||+|++|.+. . .|..+++.+.++|+|| |.+++-
T Consensus 132 d~~~~l~~l~~~~~~~~fD~V~~d~~~-------~----~~~~~l~~~~~~Lkpg-G~lv~~ 181 (232)
T 3cbg_A 132 PALATLEQLTQGKPLPEFDLIFIDADK-------R----NYPRYYEIGLNLLRRG-GLMVID 181 (232)
T ss_dssp CHHHHHHHHHTSSSCCCEEEEEECSCG-------G----GHHHHHHHHHHTEEEE-EEEEEE
T ss_pred CHHHHHHHHHhcCCCCCcCEEEECCCH-------H----HHHHHHHHHHHHcCCC-eEEEEe
Confidence 97653 2222 689999999761 1 2667788899999999 988773
No 189
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.20 E-value=2.4e-10 Score=114.58 Aligned_cols=115 Identities=11% Similarity=-0.003 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhc--cCCCCcccceeeeeeccccc-cCCCCCeeE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHN--SGNLNRELKVSPLVCNVRQL-CFKPACVDG 387 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~--g~~~~~~~~i~~~~~Da~~l-~~~~~~~D~ 387 (494)
.+.+|||+|||+|.++++++...+...++++|+|+.+++.|++|+... +. -..+++++.+|+... +...++||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~---~~~~v~~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF---DDPRAEIVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG---GCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc---CCCceEEEECcHHHHHhhCCCCceE
Confidence 457999999999999999988766789999999999999999998642 21 024688999998774 333468999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
|++|+|.. ..+....+ ....|++.+.++|+|| |.+++.+.+
T Consensus 167 Ii~d~~~~-~~~~~~~l--~~~~~l~~~~~~Lkpg-G~lv~~~~~ 207 (296)
T 1inl_A 167 IIIDSTDP-TAGQGGHL--FTEEFYQACYDALKED-GVFSAETED 207 (296)
T ss_dssp EEEEC-----------C--CSHHHHHHHHHHEEEE-EEEEEECCC
T ss_pred EEEcCCCc-ccCchhhh--hHHHHHHHHHHhcCCC-cEEEEEccC
Confidence 99999753 11111111 1356777899999999 999887654
No 190
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.20 E-value=3.6e-10 Score=109.70 Aligned_cols=120 Identities=13% Similarity=0.071 Sum_probs=89.2
Q ss_pred ccchHHHHHHHHHHhC---CCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccce
Q psy19 293 TTLKPTIAYNMVRLAS---PIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKV 368 (494)
Q Consensus 293 a~L~e~lAa~ll~la~---~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i 368 (494)
.|.+..+|+.++.... +++|.+|||+|||+|+++..+|.. .+...|+|+|+++.+++.....++.. .++
T Consensus 55 ~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-------~nv 127 (232)
T 3id6_C 55 NAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-------PNI 127 (232)
T ss_dssp CTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-------TTE
T ss_pred chHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-------CCe
Confidence 5678899999887654 789999999999999999888865 45679999999999986665554422 246
Q ss_pred eeeeeccccccC---CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 369 SPLVCNVRQLCF---KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 369 ~~~~~Da~~l~~---~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.++++|+..... ..++||+|++|.|.. +.. ..++..+.++|||| |++++..
T Consensus 128 ~~i~~Da~~~~~~~~~~~~~D~I~~d~a~~-------~~~---~il~~~~~~~LkpG-G~lvisi 181 (232)
T 3id6_C 128 FPLLADARFPQSYKSVVENVDVLYVDIAQP-------DQT---DIAIYNAKFFLKVN-GDMLLVI 181 (232)
T ss_dssp EEEECCTTCGGGTTTTCCCEEEEEECCCCT-------THH---HHHHHHHHHHEEEE-EEEEEEE
T ss_pred EEEEcccccchhhhccccceEEEEecCCCh-------hHH---HHHHHHHHHhCCCC-eEEEEEE
Confidence 788999986531 135899999998741 111 12233456699999 9998863
No 191
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.20 E-value=1.5e-10 Score=114.83 Aligned_cols=125 Identities=13% Similarity=0.116 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeC-CHHHHHHHHHHHHhccCC-CCcc----ccee
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDI-NEKLVLKTQANVLHNSGN-LNRE----LKVS 369 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~-~~~~----~~i~ 369 (494)
.+.++..++......++.+|||+|||+|.+++.++... ...|+|+|+ ++.+++.|+.|+..|+.. .++. .++.
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~ 142 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPK 142 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCE
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeE
Confidence 55677777776655678899999999999999988863 248999999 899999999999433210 0111 2456
Q ss_pred eeeecccc----cc--CCCCCeeEEEE-cCCCccccCCccchHHHHHHHHHHHhhccc---C--CCcEEEEEec
Q psy19 370 PLVCNVRQ----LC--FKPACVDGIVT-DLPFGKRVGSKSNNFLLYRLFLIEIGKIVR---P--QIGRAILLTS 431 (494)
Q Consensus 370 ~~~~Da~~----l~--~~~~~~D~IVt-NPPYG~r~~~~~~~~~ly~~fL~~l~rvLk---p--g~G~lvllt~ 431 (494)
+...|..+ +. +..++||+||+ |++|... + +..+++.+.++|+ | | |+++++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~-----~----~~~ll~~l~~~Lk~~~p~~g-G~l~v~~~ 206 (281)
T 3bzb_A 143 VVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ-----A----HDALLRSVKMLLALPANDPT-AVALVTFT 206 (281)
T ss_dssp EEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG-----G----HHHHHHHHHHHBCCTTTCTT-CEEEEEEC
T ss_pred EEEecCCCccHHHHhhccCCCCCEEEEeCcccChH-----H----HHHHHHHHHHHhcccCCCCC-CEEEEEEE
Confidence 66555433 21 03468999987 8877521 2 4566778999999 9 8 98877644
No 192
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.20 E-value=3.3e-10 Score=115.98 Aligned_cols=117 Identities=12% Similarity=0.003 Sum_probs=92.1
Q ss_pred HHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC
Q psy19 301 YNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF 380 (494)
Q Consensus 301 a~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~ 380 (494)
..++....+.++.+|||+|||+|.+++.++..+|+..++|+|+ +.+++.|++|+...++ ..++.+.++|+.+ ++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~-~~ 245 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL----ADRVTVAEGDFFK-PL 245 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTTS-CC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC----CCceEEEeCCCCC-cC
Confidence 3455555677889999999999999999999888889999999 9999999999987754 4468899999976 34
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+ ..||+|+++..+.. .. ..-...+++++.++|+|| |+++++..
T Consensus 246 ~-~~~D~v~~~~vl~~-~~-----~~~~~~~l~~~~~~L~pg-G~l~i~e~ 288 (374)
T 1qzz_A 246 P-VTADVVLLSFVLLN-WS-----DEDALTILRGCVRALEPG-GRLLVLDR 288 (374)
T ss_dssp S-CCEEEEEEESCGGG-SC-----HHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred C-CCCCEEEEeccccC-CC-----HHHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 3 34999999765432 11 112346788899999999 99887644
No 193
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.20 E-value=5.1e-11 Score=107.00 Aligned_cols=108 Identities=14% Similarity=0.069 Sum_probs=81.7
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-------
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC------- 379 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~------- 379 (494)
...++.+|||+|||+|.+++.++.. .++..++|+|+++ ++.. .++.+.++|+.+.+
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEEEEESCTTSHHHHHHHHH
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEEEEEcccccchhhhhhhc
Confidence 3678889999999999999999887 3668999999999 6432 23578889998765
Q ss_pred -CCCCCeeEEEEcCCCccccCCc---cchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 380 -FKPACVDGIVTDLPFGKRVGSK---SNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 380 -~~~~~~D~IVtNPPYG~r~~~~---~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+++++||+|++|+|+....... .....++..+++++.++|+|| |.+++.+..
T Consensus 83 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~ 138 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVFQ 138 (180)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred cCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 5567899999999975321110 111223468889999999999 999886654
No 194
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.20 E-value=2.3e-10 Score=109.17 Aligned_cols=124 Identities=15% Similarity=0.159 Sum_probs=94.3
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
..+...++... .++.+|||+|||+|.+++.++.. ..++|+|+++.+++.|++++...+ ..+.+.++|+.
T Consensus 21 ~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~ 89 (243)
T 3d2l_A 21 PEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN------RHVDFWVQDMR 89 (243)
T ss_dssp HHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCGG
T ss_pred HHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC------CceEEEEcChh
Confidence 34555555554 35689999999999999988765 689999999999999999998654 23678999999
Q ss_pred cccCCCCCeeEEEEcC-CCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHH
Q psy19 377 QLCFKPACVDGIVTDL-PFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQ 438 (494)
Q Consensus 377 ~l~~~~~~~D~IVtNP-PYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~ 438 (494)
+++++ ++||+|+++. .+. .+.. ..-...+++++.++|+|| |++++-+++...+..
T Consensus 90 ~~~~~-~~fD~v~~~~~~~~-~~~~----~~~~~~~l~~~~~~L~pg-G~l~~~~~~~~~~~~ 145 (243)
T 3d2l_A 90 ELELP-EPVDAITILCDSLN-YLQT----EADVKQTFDSAARLLTDG-GKLLFDVHSPYKMET 145 (243)
T ss_dssp GCCCS-SCEEEEEECTTGGG-GCCS----HHHHHHHHHHHHHHEEEE-EEEEEEEECHHHHHT
T ss_pred hcCCC-CCcCEEEEeCCchh-hcCC----HHHHHHHHHHHHHhcCCC-eEEEEEcCCHHHHHH
Confidence 88765 7899999975 332 1211 122456778899999999 999988887754433
No 195
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.20 E-value=4.3e-11 Score=116.76 Aligned_cols=117 Identities=20% Similarity=0.257 Sum_probs=91.0
Q ss_pred cchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 294 TLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 294 ~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
++...++..+..... .++.+|||+|||+|.++..++..+++..++|+|+++.+++.|+++.. .+.+..+
T Consensus 69 ~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~ 137 (269)
T 1p91_A 69 PLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP----------QVTFCVA 137 (269)
T ss_dssp HHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT----------TSEEEEC
T ss_pred HHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC----------CcEEEEc
Confidence 344555554444332 46789999999999999999988777899999999999999988742 2468889
Q ss_pred ccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHH
Q psy19 374 NVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLI 437 (494)
Q Consensus 374 Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~ 437 (494)
|+..+++.+++||+|+++.+ . .+++++.++|+|| |+++++++....+.
T Consensus 138 d~~~~~~~~~~fD~v~~~~~-------~--------~~l~~~~~~L~pg-G~l~~~~~~~~~~~ 185 (269)
T 1p91_A 138 SSHRLPFSDTSMDAIIRIYA-------P--------CKAEELARVVKPG-GWVITATPGPRHLM 185 (269)
T ss_dssp CTTSCSBCTTCEEEEEEESC-------C--------CCHHHHHHHEEEE-EEEEEEEECTTTTH
T ss_pred chhhCCCCCCceeEEEEeCC-------h--------hhHHHHHHhcCCC-cEEEEEEcCHHHHH
Confidence 99888877789999999643 1 1345788999999 99999988765443
No 196
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.19 E-value=5.7e-10 Score=114.03 Aligned_cols=118 Identities=11% Similarity=0.058 Sum_probs=94.9
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
.+..++....+.++.+|||+|||+|.+++.++..+|+..++|+|+ +.+++.|++|+...++ ..++.+..+|+.+.
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV----ADRMRGIAVDIYKE 252 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC----TTTEEEEECCTTTS
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC----CCCEEEEeCccccC
Confidence 445666677778889999999999999999999998899999999 9999999999997654 44689999999987
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+++. .|+|++.-.+.. .. .+....+++++.++|+|| |+++++.
T Consensus 253 ~~~~--~D~v~~~~vlh~-~~-----d~~~~~~l~~~~~~L~pg-G~l~i~e 295 (359)
T 1x19_A 253 SYPE--ADAVLFCRILYS-AN-----EQLSTIMCKKAFDAMRSG-GRLLILD 295 (359)
T ss_dssp CCCC--CSEEEEESCGGG-SC-----HHHHHHHHHHHHTTCCTT-CEEEEEE
T ss_pred CCCC--CCEEEEechhcc-CC-----HHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 6653 399999654331 11 123557888999999999 9998765
No 197
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.19 E-value=9.6e-11 Score=118.90 Aligned_cols=113 Identities=16% Similarity=0.112 Sum_probs=86.2
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCc-ccceeeeeeccccc-cCCCCCeeEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNR-ELKVSPLVCNVRQL-CFKPACVDGI 388 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~-~~~i~~~~~Da~~l-~~~~~~~D~I 388 (494)
.+.+|||+|||+|.++++++...+...++++|+|+.+++.|++|+.... .+. ..+++++++|+.+. +..+++||+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~--~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS--CGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS--GGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc--cccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 4579999999999999999887667899999999999999999987521 011 24688999998774 3234689999
Q ss_pred EEcCCCccccCCccchHHHH-HHHHHHHhhcccCCCcEEEEEec
Q psy19 389 VTDLPFGKRVGSKSNNFLLY-RLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly-~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
|+|+|-.. +.. ..+| ..|++.+.++|+|| |.+++-+.
T Consensus 194 i~d~~~p~--~~~---~~l~~~~~l~~~~~~Lkpg-G~lv~~~~ 231 (321)
T 2pt6_A 194 IVDSSDPI--GPA---ETLFNQNFYEKIYNALKPN-GYCVAQCE 231 (321)
T ss_dssp EEECCCSS--SGG---GGGSSHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred EECCcCCC--Ccc---hhhhHHHHHHHHHHhcCCC-cEEEEEcC
Confidence 99994211 111 1234 57777899999999 99988654
No 198
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.19 E-value=3.6e-11 Score=115.79 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=96.6
Q ss_pred cchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 294 TLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 294 ~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.+.+..++.|..++...++.+|||+|||+|.+++.++...+ +..++|+|+++.+++.|++|+..+|+ ..++.+.+
T Consensus 43 ~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~----~~~v~~~~ 118 (239)
T 2hnk_A 43 QISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL----ENKIFLKL 118 (239)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEE
T ss_pred ccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCEEEEE
Confidence 46677777777777767788999999999999999998866 67999999999999999999997764 44578999
Q ss_pred eccccc-c--------------CCC--CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 373 CNVRQL-C--------------FKP--ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 373 ~Da~~l-~--------------~~~--~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+|+.+. + +++ ++||+|++|.+ ... |..+++.+.++|+|| |.+++..
T Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~-------~~~----~~~~l~~~~~~L~pg-G~lv~~~ 181 (239)
T 2hnk_A 119 GSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD-------KEN----YPNYYPLILKLLKPG-GLLIADN 181 (239)
T ss_dssp SCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC-------GGG----HHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCC-------HHH----HHHHHHHHHHHcCCC-eEEEEEc
Confidence 998663 2 111 68999999843 112 456777899999999 9988754
No 199
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.18 E-value=5.5e-11 Score=127.06 Aligned_cols=118 Identities=13% Similarity=0.160 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecc
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNV 375 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da 375 (494)
.+.+..+++......++.+|||+|||+|.+++.+|.. +...|+|+|+++ +++.|++|+..+|+ ..++.++++|+
T Consensus 143 t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl----~~~v~~~~~d~ 216 (480)
T 3b3j_A 143 TGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL----TDRIVVIPGKV 216 (480)
T ss_dssp HHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTC----TTTEEEEESCT
T ss_pred HHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCC----CCcEEEEECch
Confidence 4455666666555567889999999999999988874 456999999999 99999999998765 45689999999
Q ss_pred ccccCCCCCeeEEEEcCC-CccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 376 RQLCFKPACVDGIVTDLP-FGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 376 ~~l~~~~~~~D~IVtNPP-YG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
.+++++ ++||+||+||| |... . .. +..++..+.++|+|| |.+++
T Consensus 217 ~~~~~~-~~fD~Ivs~~~~~~~~--~-e~----~~~~l~~~~~~Lkpg-G~li~ 261 (480)
T 3b3j_A 217 EEVSLP-EQVDIIISEPMGYMLF--N-ER----MLESYLHAKKYLKPS-GNMFP 261 (480)
T ss_dssp TTCCCS-SCEEEEECCCCHHHHT--C-HH----HHHHHHHGGGGEEEE-EEEES
T ss_pred hhCccC-CCeEEEEEeCchHhcC--c-HH----HHHHHHHHHHhcCCC-CEEEE
Confidence 987665 58999999998 3211 1 11 234455789999999 98764
No 200
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.18 E-value=5.8e-11 Score=116.79 Aligned_cols=92 Identities=15% Similarity=0.169 Sum_probs=79.8
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.++..++..+++.++.+|||+|||+|.+...++.. +..++|+|+|+.+++.+++|+.. ..+++++++|
T Consensus 13 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~-------~~~v~~i~~D 83 (255)
T 3tqs_A 13 HDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ-------QKNITIYQND 83 (255)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT-------CTTEEEEESC
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh-------CCCcEEEEcc
Confidence 57889999999999999999999999999999998877 57999999999999999999874 1357899999
Q ss_pred cccccCCC----CCeeEEEEcCCCcc
Q psy19 375 VRQLCFKP----ACVDGIVTDLPFGK 396 (494)
Q Consensus 375 a~~l~~~~----~~~D~IVtNPPYG~ 396 (494)
+.++++++ +.|| ||+||||..
T Consensus 84 ~~~~~~~~~~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 84 ALQFDFSSVKTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp TTTCCGGGSCCSSCEE-EEEECCHHH
T ss_pred hHhCCHHHhccCCCeE-EEecCCccc
Confidence 99986542 4687 999999964
No 201
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.18 E-value=5e-11 Score=119.69 Aligned_cols=95 Identities=14% Similarity=0.108 Sum_probs=84.1
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.-+.+.+++.|+..+.+.++++|||+|||+|.+...++.. +..|+|+|+|+.+++.+++++... .++.+++
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~-------~~v~vi~ 102 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELY-------NNIEIIW 102 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHC-------SSEEEEE
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccC-------CCeEEEE
Confidence 3467899999999999999999999999999999999887 679999999999999999998722 3478999
Q ss_pred eccccccCCCCCeeEEEEcCCCcc
Q psy19 373 CNVRQLCFKPACVDGIVTDLPFGK 396 (494)
Q Consensus 373 ~Da~~l~~~~~~~D~IVtNPPYG~ 396 (494)
+|+.++++++..||.||+|+||..
T Consensus 103 gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 103 GDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp SCTTTSCGGGSCCSEEEEECCGGG
T ss_pred CchhhCCcccCCccEEEEeCcccc
Confidence 999998776668999999999974
No 202
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.18 E-value=2.1e-10 Score=107.48 Aligned_cols=108 Identities=12% Similarity=-0.014 Sum_probs=85.3
Q ss_pred HhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCe
Q psy19 306 LASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACV 385 (494)
Q Consensus 306 la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~ 385 (494)
+....++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+. .+. .++.+.++|+.++ +++++|
T Consensus 41 l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~~-----~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 41 LRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HGL-----DNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GCC-----TTEEEEECCTTSC-CCSSCE
T ss_pred HhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cCC-----CCeEEEecccccC-CCCCce
Confidence 344667889999999999999998887 6799999999999999998 221 3478999999887 566899
Q ss_pred eEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 386 DGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 386 D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
|+|+++--+.. +. ...+..+++++.++|+|| |.+++.+..
T Consensus 109 D~v~~~~~l~~-~~-----~~~~~~~l~~~~~~L~pg-G~l~~~~~~ 148 (218)
T 3ou2_A 109 DAVFFAHWLAH-VP-----DDRFEAFWESVRSAVAPG-GVVEFVDVT 148 (218)
T ss_dssp EEEEEESCGGG-SC-----HHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred eEEEEechhhc-CC-----HHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 99999753321 11 123467888999999999 999887653
No 203
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.16 E-value=1.4e-10 Score=113.26 Aligned_cols=118 Identities=10% Similarity=0.038 Sum_probs=90.0
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHH------HHHHHHHHHHhccCCCCcccceeeee
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEK------LVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~------al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
...++....+.++.+|||+|||+|.+++.++... +...++|+|+++. +++.|++++...++ ..++.+.+
T Consensus 32 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~----~~~v~~~~ 107 (275)
T 3bkx_A 32 RLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL----GDRLTVHF 107 (275)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT----GGGEEEEC
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC----CCceEEEE
Confidence 3445566677889999999999999999998874 5689999999997 99999999986653 45678999
Q ss_pred ec---cccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 373 CN---VRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 373 ~D---a~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+| ...+++++++||+|+++.++.. +.. . ..+++.+.++++|| |++++..
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~-~~~---~----~~~~~~~~~l~~~g-G~l~~~~ 159 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWY-FAS---A----NALALLFKNMAAVC-DHVDVAE 159 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGG-SSC---H----HHHHHHHHHHTTTC-SEEEEEE
T ss_pred CChhhhccCCCCCCCEEEEEEccchhh-CCC---H----HHHHHHHHHHhCCC-CEEEEEE
Confidence 98 4455666789999999988643 222 1 12444566666778 9988864
No 204
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.16 E-value=2.5e-10 Score=114.29 Aligned_cols=141 Identities=17% Similarity=0.174 Sum_probs=98.3
Q ss_pred chHHHHHHHHHHhC--CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCC--Ccccceee
Q psy19 295 LKPTIAYNMVRLAS--PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNL--NRELKVSP 370 (494)
Q Consensus 295 L~e~lAa~ll~la~--~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~--~~~~~i~~ 370 (494)
++..+...++.... ..++.+|||+|||+|.++..++.. +...++|+|+++.+++.|+.+....+... .....+.+
T Consensus 16 ~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 94 (313)
T 3bgv_A 16 MKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEF 94 (313)
T ss_dssp HHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEE
T ss_pred HHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEE
Confidence 34445555544432 236789999999999999888764 46799999999999999999987542100 01235789
Q ss_pred eeecccccc----CC--CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHH
Q psy19 371 LVCNVRQLC----FK--PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALH 441 (494)
Q Consensus 371 ~~~Da~~l~----~~--~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~ 441 (494)
+++|+..++ ++ +++||+|+++..+..-... ..-...++.++.++|+|| |.+++.+++...+...+.
T Consensus 95 ~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~----~~~~~~~l~~~~~~Lkpg-G~li~~~~~~~~l~~~~~ 166 (313)
T 3bgv_A 95 ITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFES----YEQADMMLRNACERLSPG-GYFIGTTPNSFELIRRLE 166 (313)
T ss_dssp EECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGS----HHHHHHHHHHHHTTEEEE-EEEEEEEECHHHHHHHHT
T ss_pred EEecccccchhhhcccCCCCEEEEEEecchhhccCC----HHHHHHHHHHHHHHhCCC-cEEEEecCChHHHHHHHH
Confidence 999998875 43 3589999997643321111 122457888999999999 999999998765555444
No 205
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.15 E-value=1.8e-10 Score=112.12 Aligned_cols=113 Identities=14% Similarity=0.068 Sum_probs=87.2
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+...+..+.. ++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+++.. + .+.++|+..+
T Consensus 44 ~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~--~---------~~~~~d~~~~ 108 (260)
T 2avn_A 44 IGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV--K---------NVVEAKAEDL 108 (260)
T ss_dssp HHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC--S---------CEEECCTTSC
T ss_pred HHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC--C---------CEEECcHHHC
Confidence 3444444433 6789999999999999998876 6799999999999999998754 0 2778899988
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
++++++||+|+++.+...... + ...+++++.++|+|| |++++.+++..
T Consensus 109 ~~~~~~fD~v~~~~~~~~~~~---~----~~~~l~~~~~~Lkpg-G~l~~~~~~~~ 156 (260)
T 2avn_A 109 PFPSGAFEAVLALGDVLSYVE---N----KDKAFSEIRRVLVPD-GLLIATVDNFY 156 (260)
T ss_dssp CSCTTCEEEEEECSSHHHHCS---C----HHHHHHHHHHHEEEE-EEEEEEEEBHH
T ss_pred CCCCCCEEEEEEcchhhhccc---c----HHHHHHHHHHHcCCC-eEEEEEeCChH
Confidence 877789999999654221111 1 346777899999999 99999887753
No 206
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.15 E-value=9.4e-11 Score=115.45 Aligned_cols=85 Identities=9% Similarity=-0.026 Sum_probs=68.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCH-------HHHHHHHHHHHhccCCCCcccceeeeeeccccc-c
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINE-------KLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-C 379 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~-------~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~ 379 (494)
...++.+|||+|||+|.+++.+|.. +..|+|+|+++ .+++.|+.|++.+++ ..++.++++|+.++ +
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~----~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDT----AARINLHFGNAAEQMP 153 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH----HTTEEEEESCHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC----ccCeEEEECCHHHHHH
Confidence 4556789999999999999999986 67999999999 999999999987764 34578999999875 3
Q ss_pred -CCC--CCeeEEEEcCCCcccc
Q psy19 380 -FKP--ACVDGIVTDLPFGKRV 398 (494)
Q Consensus 380 -~~~--~~~D~IVtNPPYG~r~ 398 (494)
+++ ++||+|++||||....
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~~~ 175 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPERR 175 (258)
T ss_dssp HHHHHHCCCSEEEECCCC----
T ss_pred hhhccCCCccEEEECCCCCCcc
Confidence 333 5899999999997643
No 207
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.15 E-value=9.7e-11 Score=117.97 Aligned_cols=115 Identities=14% Similarity=0.003 Sum_probs=85.8
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHh--ccCCCCcccceeeeeeccccc-cCCCCC
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLH--NSGNLNRELKVSPLVCNVRQL-CFKPAC 384 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~--~g~~~~~~~~i~~~~~Da~~l-~~~~~~ 384 (494)
....+.+|||+|||+|.++++++...+...++++|+|+.+++.|++|+.. .++. ..+++++.+|+.+. +..+++
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~---~~rv~v~~~Da~~~l~~~~~~ 168 (304)
T 2o07_A 92 SHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS---SSKLTLHVGDGFEFMKQNQDA 168 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHHHTCSSC
T ss_pred hCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC---CCcEEEEECcHHHHHhhCCCC
Confidence 33456799999999999999999876678999999999999999999865 2220 34678999999774 334578
Q ss_pred eeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 385 VDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 385 ~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
||+|++|+|..... . ....+..|++.+.++|+|| |.+++-+
T Consensus 169 fD~Ii~d~~~~~~~--~--~~l~~~~~l~~~~~~Lkpg-G~lv~~~ 209 (304)
T 2o07_A 169 FDVIITDSSDPMGP--A--ESLFKESYYQLMKTALKED-GVLCCQG 209 (304)
T ss_dssp EEEEEEECC---------------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred ceEEEECCCCCCCc--c--hhhhHHHHHHHHHhccCCC-eEEEEec
Confidence 99999999864321 1 1122457788999999999 9988865
No 208
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.15 E-value=3.7e-10 Score=113.62 Aligned_cols=122 Identities=11% Similarity=0.075 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhCC--CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 297 PTIAYNMVRLASP--IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 297 e~lAa~ll~la~~--~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
...+..++....+ .++.+|||+|||+|.+++.++..+|+..++|+|++ .+++.|++++...++ ..++.+..+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~----~~~v~~~~~d 223 (335)
T 2r3s_A 149 ANPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV----ASRYHTIAGS 223 (335)
T ss_dssp HHHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC----GGGEEEEESC
T ss_pred hhhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC----CcceEEEecc
Confidence 3445566666676 78899999999999999999998888999999999 999999999987754 4568999999
Q ss_pred cccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 375 VRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 375 a~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+.+.+++. .||+|++.-.... .. ..-...+++++.++|+|| |+++++..
T Consensus 224 ~~~~~~~~-~~D~v~~~~~l~~-~~-----~~~~~~~l~~~~~~L~pg-G~l~i~e~ 272 (335)
T 2r3s_A 224 AFEVDYGN-DYDLVLLPNFLHH-FD-----VATCEQLLRKIKTALAVE-GKVIVFDF 272 (335)
T ss_dssp TTTSCCCS-CEEEEEEESCGGG-SC-----HHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred cccCCCCC-CCcEEEEcchhcc-CC-----HHHHHHHHHHHHHhCCCC-cEEEEEee
Confidence 98876653 4999999544321 11 122457788999999999 99888643
No 209
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.15 E-value=1.7e-10 Score=110.16 Aligned_cols=125 Identities=13% Similarity=0.074 Sum_probs=91.3
Q ss_pred cccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee
Q psy19 292 ITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL 371 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~ 371 (494)
+.+..+.+...++.... .++.+|||+|||+|.+++.++.. +..++|+|+++.+++.|++|. .++.++
T Consensus 30 ~~~~~~~l~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~----------~~~~~~ 96 (226)
T 3m33_A 30 SGPDPELTFDLWLSRLL-TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANA----------PHADVY 96 (226)
T ss_dssp SSSCTTHHHHHHHHHHC-CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC----------TTSEEE
T ss_pred CCCCHHHHHHHHHHhcC-CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC----------CCceEE
Confidence 44444555555544322 56789999999999999999887 679999999999999999981 135789
Q ss_pred eecc-ccccCC-CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec--CHHHHHHHHHhcc
Q psy19 372 VCNV-RQLCFK-PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS--DRKHLIQALHITS 444 (494)
Q Consensus 372 ~~Da-~~l~~~-~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~--~~~~l~~~l~~~~ 444 (494)
++|+ ..+|++ +++||+|++++.. ..+++++.++|+|| |+++.... ....+...+...|
T Consensus 97 ~~d~~~~~~~~~~~~fD~v~~~~~~--------------~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~l~~~G 158 (226)
T 3m33_A 97 EWNGKGELPAGLGAPFGLIVSRRGP--------------TSVILRLPELAAPD-AHFLYVGPRLNVPEVPERLAAVG 158 (226)
T ss_dssp ECCSCSSCCTTCCCCEEEEEEESCC--------------SGGGGGHHHHEEEE-EEEEEEESSSCCTHHHHHHHHTT
T ss_pred EcchhhccCCcCCCCEEEEEeCCCH--------------HHHHHHHHHHcCCC-cEEEEeCCcCCHHHHHHHHHHCC
Confidence 9999 456766 6899999998421 13445688899999 99884432 2234666676655
No 210
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.14 E-value=2.7e-10 Score=115.26 Aligned_cols=113 Identities=14% Similarity=0.005 Sum_probs=83.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCc-ccceeeeeeccccc-cCCCCCeeEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNR-ELKVSPLVCNVRQL-CFKPACVDGI 388 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~-~~~i~~~~~Da~~l-~~~~~~~D~I 388 (494)
.+.+|||+|||+|.++++++...+...++++|+|+.+++.|++|+..... ++ ..+++++.+|+... +...++||+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~--~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSC--GFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSG--GGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcc--ccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 45799999999999999999876778999999999999999999865310 11 34688999999874 3334689999
Q ss_pred EEcCCCccccCCccchHHHH-HHHHHHHhhcccCCCcEEEEEec
Q psy19 389 VTDLPFGKRVGSKSNNFLLY-RLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly-~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++|+|... +. ...+| ..|++.+.++|+|| |.+++-+.
T Consensus 186 i~d~~~~~--~~---~~~l~t~~~l~~~~~~Lkpg-G~lv~~~~ 223 (314)
T 2b2c_A 186 ITDSSDPV--GP---AESLFGQSYYELLRDALKED-GILSSQGE 223 (314)
T ss_dssp EECCC------------------HHHHHHHHEEEE-EEEEEECC
T ss_pred EEcCCCCC--Cc---chhhhHHHHHHHHHhhcCCC-eEEEEECC
Confidence 99996431 11 12345 67888999999999 99888653
No 211
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.14 E-value=1.5e-10 Score=114.37 Aligned_cols=113 Identities=9% Similarity=0.004 Sum_probs=84.7
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
..+..++......++.+|||+|||+|.+++.+|.. +..|+|+|+++.|++.|++|+..+ +++.|+.+
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~-----------~v~~~~~~ 98 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR-----------CVTIDLLD 98 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS-----------CCEEEECC
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc-----------cceeeeee
Confidence 45566777778889999999999999999999987 679999999999999999998643 23344433
Q ss_pred ccC-----CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 378 LCF-----KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 378 l~~-----~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++. .+++||+|++|..+.. +. . .-...+++++.++| || |++++-+.
T Consensus 99 ~~~~~~~~~~~~fD~Vv~~~~l~~-~~-~----~~~~~~l~~l~~lL-PG-G~l~lS~~ 149 (261)
T 3iv6_A 99 ITAEIPKELAGHFDFVLNDRLINR-FT-T----EEARRACLGMLSLV-GS-GTVRASVK 149 (261)
T ss_dssp TTSCCCGGGTTCCSEEEEESCGGG-SC-H----HHHHHHHHHHHHHH-TT-SEEEEEEE
T ss_pred cccccccccCCCccEEEEhhhhHh-CC-H----HHHHHHHHHHHHhC-cC-cEEEEEec
Confidence 322 1368999999976532 11 1 12345677899999 99 99887654
No 212
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.14 E-value=5.5e-11 Score=123.19 Aligned_cols=105 Identities=20% Similarity=0.214 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.+|.+|||+|||||.+++.||..+. .+|+|+|.++ +++.|+++++.+|+ .++|.++++|+.++.++ +.+|+||
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~~----~~~i~~i~~~~~~~~lp-e~~Dviv 154 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNGL----EDRVHVLPGPVETVELP-EQVDAIV 154 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTTC----TTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcCC----CceEEEEeeeeeeecCC-ccccEEE
Confidence 3688999999999999999998742 5799999996 88999999999875 56789999999998776 6899999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEE
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAI 427 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lv 427 (494)
+++- |..+.... ++..++....++|+|| |.++
T Consensus 155 sE~~-~~~l~~e~----~l~~~l~a~~r~Lkp~-G~~i 186 (376)
T 4hc4_A 155 SEWM-GYGLLHES----MLSSVLHARTKWLKEG-GLLL 186 (376)
T ss_dssp CCCC-BTTBTTTC----SHHHHHHHHHHHEEEE-EEEE
T ss_pred eecc-cccccccc----hhhhHHHHHHhhCCCC-ceEC
Confidence 9863 32222222 2445556788999998 7543
No 213
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.14 E-value=1.4e-10 Score=118.34 Aligned_cols=115 Identities=14% Similarity=0.100 Sum_probs=87.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhc--cCCCCcccceeeeeeccccc-c-CCCC
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHN--SGNLNRELKVSPLVCNVRQL-C-FKPA 383 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~--g~~~~~~~~i~~~~~Da~~l-~-~~~~ 383 (494)
....+.+|||+|||+|.++++++...+...|+++|+|+.+++.|++|+... ++ -..+++++++|+.+. + ..++
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl---~~~rv~~~~~D~~~~l~~~~~~ 193 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY---EDPRVNLVIGDGVAFLKNAAEG 193 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG---GSTTEEEEESCHHHHHHTSCTT
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc---CCCcEEEEECCHHHHHHhccCC
Confidence 334567999999999999999998766789999999999999999998753 22 024688999998875 2 3346
Q ss_pred CeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 384 CVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 384 ~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+||+|++|++-.. +.... ..+..|++.+.++|+|| |.+++-+
T Consensus 194 ~fDlIi~d~~~p~--~~~~~--l~~~~~l~~~~~~Lkpg-G~lv~~~ 235 (334)
T 1xj5_A 194 SYDAVIVDSSDPI--GPAKE--LFEKPFFQSVARALRPG-GVVCTQA 235 (334)
T ss_dssp CEEEEEECCCCTT--SGGGG--GGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CccEEEECCCCcc--Ccchh--hhHHHHHHHHHHhcCCC-cEEEEec
Confidence 8999999987321 11111 12467888999999999 9988853
No 214
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.14 E-value=2e-10 Score=116.25 Aligned_cols=125 Identities=18% Similarity=0.084 Sum_probs=92.0
Q ss_pred HHHHHHHHHH--hCCCC-CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 297 PTIAYNMVRL--ASPIP-GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 297 e~lAa~ll~l--a~~~~-g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
+.|+..++.+ +.+.+ ..+|||+|||+|+++.+++..+|+.+++++|+|+.+++.|++++.... ..+++++.+
T Consensus 72 e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-----~~rv~v~~~ 146 (317)
T 3gjy_A 72 RWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-----APRVKIRVD 146 (317)
T ss_dssp HHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-----TTTEEEEES
T ss_pred HHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-----CCceEEEEC
Confidence 4455544432 22322 248999999999999999988888999999999999999999986421 346889999
Q ss_pred ccccc--cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 374 NVRQL--CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 374 Da~~l--~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
|+..+ .+.+++||+||+|.+.+..... .+ ....|++.+.++|+|| |.+++-+.
T Consensus 147 Da~~~l~~~~~~~fDvIi~D~~~~~~~~~--~L--~t~efl~~~~r~Lkpg-Gvlv~~~~ 201 (317)
T 3gjy_A 147 DARMVAESFTPASRDVIIRDVFAGAITPQ--NF--TTVEFFEHCHRGLAPG-GLYVANCG 201 (317)
T ss_dssp CHHHHHHTCCTTCEEEEEECCSTTSCCCG--GG--SBHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cHHHHHhhccCCCCCEEEECCCCccccch--hh--hHHHHHHHHHHhcCCC-cEEEEEec
Confidence 99876 2345789999999765432221 11 0146677899999999 99887654
No 215
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.14 E-value=1.3e-10 Score=111.60 Aligned_cols=117 Identities=12% Similarity=0.114 Sum_probs=88.9
Q ss_pred chHHHHHHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee
Q psy19 295 LKPTIAYNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC 373 (494)
Q Consensus 295 L~e~lAa~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~ 373 (494)
..+.+...+..... ..++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+.+ +.+..+
T Consensus 24 ~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-------------~~~~~~ 88 (240)
T 3dli_A 24 SRELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK-------------FNVVKS 88 (240)
T ss_dssp CHHHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT-------------SEEECS
T ss_pred CHHHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh-------------cceeec
Confidence 44555555554443 467789999999999999988887 67899999999999999876 257788
Q ss_pred ccccc--cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 374 NVRQL--CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 374 Da~~l--~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
|+.+. ++++++||+|+++--+.. +. ..+ +..+++++.++|+|| |++++.+++.
T Consensus 89 d~~~~~~~~~~~~fD~i~~~~~l~~-~~-~~~----~~~~l~~~~~~Lkpg-G~l~~~~~~~ 143 (240)
T 3dli_A 89 DAIEYLKSLPDKYLDGVMISHFVEH-LD-PER----LFELLSLCYSKMKYS-SYIVIESPNP 143 (240)
T ss_dssp CHHHHHHTSCTTCBSEEEEESCGGG-SC-GGG----HHHHHHHHHHHBCTT-CCEEEEEECT
T ss_pred cHHHHhhhcCCCCeeEEEECCchhh-CC-cHH----HHHHHHHHHHHcCCC-cEEEEEeCCc
Confidence 88775 667789999999644321 11 112 456777899999999 9999887754
No 216
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.14 E-value=2.5e-10 Score=108.66 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=83.3
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
..++.+|||+|||+|.++..++.. +..++|+|+++.+++.|++++.. .+.+.++|+.++ +++++||+|
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~---------~v~~~~~d~~~~-~~~~~fD~v 107 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKD---------GITYIHSRFEDA-QLPRRYDNI 107 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCS---------CEEEEESCGGGC-CCSSCEEEE
T ss_pred hcCCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhhC---------CeEEEEccHHHc-CcCCcccEE
Confidence 346778999999999999998877 45899999999999999988652 468899999887 355789999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHh-hcccCCCcEEEEEecCHH
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIG-KIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~-rvLkpg~G~lvllt~~~~ 434 (494)
+++--.. .+ .+ ...+++++. ++|+|| |++++.+++..
T Consensus 108 ~~~~~l~-~~---~~----~~~~l~~~~~~~Lkpg-G~l~i~~~~~~ 145 (250)
T 2p7i_A 108 VLTHVLE-HI---DD----PVALLKRINDDWLAEG-GRLFLVCPNAN 145 (250)
T ss_dssp EEESCGG-GC---SS----HHHHHHHHHHTTEEEE-EEEEEEEECTT
T ss_pred EEhhHHH-hh---cC----HHHHHHHHHHHhcCCC-CEEEEEcCChH
Confidence 9964322 11 12 246778999 999999 99999887643
No 217
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.13 E-value=8.5e-10 Score=109.78 Aligned_cols=115 Identities=16% Similarity=0.104 Sum_probs=88.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCc-ccceeeeeeccccc-cCCCCCeeE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNR-ELKVSPLVCNVRQL-CFKPACVDG 387 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~-~~~i~~~~~Da~~l-~~~~~~~D~ 387 (494)
..+.+|||+|||+|.++.+++...+...++++|+|+.+++.|++++...+. +. ..+++++.+|+.+. +...++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC--GYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSG--GGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcc--ccCCCcEEEEECChHHHHHhCCCCceE
Confidence 456799999999999999998876678999999999999999999865321 11 24678999999874 222468999
Q ss_pred EEEcCCCccccCCccchHHHH-HHHHHHHhhcccCCCcEEEEEecC
Q psy19 388 IVTDLPFGKRVGSKSNNFLLY-RLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly-~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
|++|+|... +.. ..+| ..|++.+.++|+|| |.+++.+.+
T Consensus 155 Ii~d~~~~~--~~~---~~l~~~~~l~~~~~~L~pg-G~lv~~~~~ 194 (283)
T 2i7c_A 155 IIVDSSDPI--GPA---ETLFNQNFYEKIYNALKPN-GYCVAQCES 194 (283)
T ss_dssp EEEECCCTT--TGG---GGGSSHHHHHHHHHHEEEE-EEEEEECCC
T ss_pred EEEcCCCCC--Ccc---hhhhHHHHHHHHHHhcCCC-cEEEEECCC
Confidence 999987532 111 1233 56777899999999 999887553
No 218
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.13 E-value=1.3e-09 Score=111.22 Aligned_cols=116 Identities=12% Similarity=0.016 Sum_probs=91.6
Q ss_pred HHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC
Q psy19 301 YNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF 380 (494)
Q Consensus 301 a~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~ 380 (494)
..++....+.++.+|||+|||+|.+++.++..+++..++++|+ +.+++.|++|+...++ ..++.+..+|+.+ ++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~-~~ 246 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL----SDRVDVVEGDFFE-PL 246 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC----TTTEEEEECCTTS-CC
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC----CCceEEEeCCCCC-CC
Confidence 3455566777889999999999999999999888889999999 9999999999987764 3468899999876 34
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ ..||+|+++..+.. .. ..-...+++++.++|+|| |+++++.
T Consensus 247 ~-~~~D~v~~~~vl~~-~~-----~~~~~~~l~~~~~~L~pg-G~l~i~e 288 (360)
T 1tw3_A 247 P-RKADAIILSFVLLN-WP-----DHDAVRILTRCAEALEPG-GRILIHE 288 (360)
T ss_dssp S-SCEEEEEEESCGGG-SC-----HHHHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred C-CCccEEEEcccccC-CC-----HHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 3 35999999765432 11 112346777899999999 9988864
No 219
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.13 E-value=2.1e-10 Score=109.48 Aligned_cols=122 Identities=17% Similarity=0.145 Sum_probs=91.2
Q ss_pred chHHHHHHHHHHh--CCCCCCEEEEEcCCcChHHHHHHhcCC------CCeEEEEeCCHHHHHHHHHHHHhccCCCCccc
Q psy19 295 LKPTIAYNMVRLA--SPIPGDVFLDPMCGGGTIPVECSLSYP------HTFFVCGDINEKLVLKTQANVLHNSGNLNREL 366 (494)
Q Consensus 295 L~e~lAa~ll~la--~~~~g~~VLDP~CGSGtilIEAA~~~~------~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~ 366 (494)
..|.+.+.++.+. ...++.+|||+|||+|.++..++...+ ...++|+|+++.+++.|++|+...+...-...
T Consensus 66 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 145 (227)
T 1r18_A 66 SAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG 145 (227)
T ss_dssp CCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC
Confidence 4566666777766 467889999999999999998887543 25899999999999999999986540000013
Q ss_pred ceeeeeeccccccCCC-CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 367 KVSPLVCNVRQLCFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 367 ~i~~~~~Da~~l~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
++.+.++|+.. +++. +.||+|+++.+...- .+++.++|+|| |++++.+..
T Consensus 146 ~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~--------------~~~~~~~Lkpg-G~lvi~~~~ 196 (227)
T 1r18_A 146 QLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDT--------------PTELINQLASG-GRLIVPVGP 196 (227)
T ss_dssp SEEEEESCGGG-CCGGGCSEEEEEECSCBSSC--------------CHHHHHTEEEE-EEEEEEESC
T ss_pred ceEEEECCccc-CCCcCCCccEEEECCchHHH--------------HHHHHHHhcCC-CEEEEEEec
Confidence 46889999887 3333 689999999875421 13578899999 999988765
No 220
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.13 E-value=7.7e-11 Score=116.95 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=80.0
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.++..++..+++.++ .|||+|||+|.+...++.. +..|+|+|+|+.+++.+++|+.. .+++++++|
T Consensus 31 ~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~--------~~v~vi~~D 99 (271)
T 3fut_A 31 VSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSG--------LPVRLVFQD 99 (271)
T ss_dssp CCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTT--------SSEEEEESC
T ss_pred CCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCC--------CCEEEEECC
Confidence 578899999999999999 9999999999999999887 57899999999999999998762 346899999
Q ss_pred cccccCCC-CCeeEEEEcCCCcc
Q psy19 375 VRQLCFKP-ACVDGIVTDLPFGK 396 (494)
Q Consensus 375 a~~l~~~~-~~~D~IVtNPPYG~ 396 (494)
+.++++++ ..+|.||+||||..
T Consensus 100 ~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 100 ALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp GGGSCGGGSCTTEEEEEEECSSC
T ss_pred hhhCChhhccCccEEEecCcccc
Confidence 99987653 26899999999975
No 221
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.12 E-value=3.4e-09 Score=109.05 Aligned_cols=119 Identities=10% Similarity=-0.038 Sum_probs=94.3
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
.++..++....+.++.+|||+|||+|.+++.++..+|+..++++|+ +.+++.|++++...++ ..++.+..+|+.
T Consensus 189 ~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l----~~~v~~~~~d~~- 262 (369)
T 3gwz_A 189 TEAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL----ADRCEILPGDFF- 262 (369)
T ss_dssp HHHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTT-
T ss_pred hhHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc----CCceEEeccCCC-
Confidence 3455666667778889999999999999999999999999999999 9999999999987654 456899999998
Q ss_pred ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 378 LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 378 l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.+++. .||+|++.--... .. ..-...+|+++.++|+|| |+++++.
T Consensus 263 ~~~p~-~~D~v~~~~vlh~-~~-----d~~~~~~L~~~~~~L~pg-G~l~i~e 307 (369)
T 3gwz_A 263 ETIPD-GADVYLIKHVLHD-WD-----DDDVVRILRRIATAMKPD-SRLLVID 307 (369)
T ss_dssp TCCCS-SCSEEEEESCGGG-SC-----HHHHHHHHHHHHTTCCTT-CEEEEEE
T ss_pred CCCCC-CceEEEhhhhhcc-CC-----HHHHHHHHHHHHHHcCCC-CEEEEEE
Confidence 45554 8999998654321 11 122346788999999999 9998853
No 222
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.12 E-value=2.9e-10 Score=106.53 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=80.4
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
++.+|||+|||+|.++..+ +. .++|+|+++.+++.|++++. .+.+.++|+.++++++++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAP----------EATWVRAWGEALPFPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCT----------TSEEECCCTTSCCSCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCC----------CcEEEEcccccCCCCCCcEEEEE
Confidence 7889999999999988765 35 89999999999999999861 24688899998888778999999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
++-.+.. + .+ ...+++++.++|+|| |++++.+++.
T Consensus 101 ~~~~l~~-~---~~----~~~~l~~~~~~L~pg-G~l~i~~~~~ 135 (211)
T 2gs9_A 101 LFTTLEF-V---ED----VERVLLEARRVLRPG-GALVVGVLEA 135 (211)
T ss_dssp EESCTTT-C---SC----HHHHHHHHHHHEEEE-EEEEEEEECT
T ss_pred EcChhhh-c---CC----HHHHHHHHHHHcCCC-CEEEEEecCC
Confidence 9865432 1 12 346777899999999 9999987754
No 223
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.12 E-value=2.7e-10 Score=110.68 Aligned_cols=101 Identities=12% Similarity=0.114 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|.++..++.. +..++|+|+++.+++.|++++. ++.++++|+..+++ +++||+|+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~-~~~fD~v~ 115 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP----------DAVLHHGDMRDFSL-GRRFSAVT 115 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTCCC-SCCEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC----------CCEEEECChHHCCc-cCCcCEEE
Confidence 35689999999999999998877 5689999999999999999854 24789999999877 57999999
Q ss_pred EcC-CCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 390 TDL-PFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 390 tNP-PYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
++. .+.. +.. ..-...+++++.++|+|| |.+++-
T Consensus 116 ~~~~~l~~-~~~----~~~~~~~l~~~~~~L~pg-G~l~i~ 150 (263)
T 3pfg_A 116 CMFSSIGH-LAG----QAELDAALERFAAHVLPD-GVVVVE 150 (263)
T ss_dssp ECTTGGGG-SCH----HHHHHHHHHHHHHTEEEE-EEEEEC
T ss_pred EcCchhhh-cCC----HHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 986 4432 211 123456788999999999 998873
No 224
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.11 E-value=5.8e-10 Score=103.67 Aligned_cols=105 Identities=13% Similarity=-0.011 Sum_probs=77.0
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCC--CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-------
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYP--HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC------- 379 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~--~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~------- 379 (494)
.+++.+|||+|||+|.+++.++...+ +..++|+|+++.+ . ...+.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-----~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-----IPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-----CTTCEEEECCTTTTSSCCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-----CCCceEEEccccchhhhhhccc
Confidence 56788999999999999999998876 6899999999831 1 123578888988765
Q ss_pred ------------------CCCCCeeEEEEcCCCccccCC----ccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 380 ------------------FKPACVDGIVTDLPFGKRVGS----KSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 380 ------------------~~~~~~D~IVtNPPYG~r~~~----~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+++++||+|++|+++... +. ......+...++.++.++|+|| |++++.+.
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~-g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~ 155 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCI-GNKIDDHLNSCELTLSITHFMEQYINIG-GTYIVKMY 155 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCC-SCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCC-CCcccCHHHHHHHHHHHHHHHHHHccCC-CEEEEEEe
Confidence 455689999999864321 11 1111223345788999999999 99887544
No 225
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.10 E-value=2.3e-10 Score=111.39 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=80.1
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
..+.+.++..++..+++.++.+|||+|||+|.++.+++.. +..++|+|+|+.+++.|++|+... .++.+++
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~-------~~v~~~~ 82 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVDH-------DNFQVLN 82 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTTC-------CSEEEEC
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhccC-------CCeEEEE
Confidence 3467889999999998888999999999999999999987 479999999999999999998631 3578999
Q ss_pred eccccccCCC-CCeeEEEEcCCCcc
Q psy19 373 CNVRQLCFKP-ACVDGIVTDLPFGK 396 (494)
Q Consensus 373 ~Da~~l~~~~-~~~D~IVtNPPYG~ 396 (494)
+|+.++++++ ..+ .||+||||..
T Consensus 83 ~D~~~~~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 83 KDILQFKFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CCGGGCCCCSSCCC-EEEEECCGGG
T ss_pred ChHHhCCcccCCCe-EEEEeCCccc
Confidence 9999987763 345 7999999963
No 226
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.10 E-value=3.6e-10 Score=112.31 Aligned_cols=112 Identities=11% Similarity=-0.024 Sum_probs=84.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCc--------ccceeeeeeccccc-cC
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNR--------ELKVSPLVCNVRQL-CF 380 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~--------~~~i~~~~~Da~~l-~~ 380 (494)
..+.+|||+|||+|.++.+++.. +...++++|+|+.+++.|++|+ ... .++ ..+++++.+|+.+. +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~--~~l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KID--NGLLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTT--TTHHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhc--cccccccccCCCCcEEEEECchHHHhcc
Confidence 35679999999999999999887 6679999999999999999998 331 111 34688999998764 23
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+++||+|++|+|+... ....+ ....|++.+.++|+|| |.+++-+.
T Consensus 150 -~~~fD~Ii~d~~~~~~--~~~~l--~~~~~l~~~~~~L~pg-G~lv~~~~ 194 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVG--PAKVL--FSEEFYRYVYDALNNP-GIYVTQAG 194 (281)
T ss_dssp -CCCEEEEEEECCCCC-------T--TSHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred -cCCeeEEEECCCCCCC--cchhh--hHHHHHHHHHHhcCCC-cEEEEEcC
Confidence 4689999999996421 11111 1356777899999999 99888653
No 227
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.10 E-value=8.3e-10 Score=106.66 Aligned_cols=117 Identities=16% Similarity=0.269 Sum_probs=83.7
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCC------------------------
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLN------------------------ 363 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~------------------------ 363 (494)
...++.+|||+|||+|.+++.++..+. ..++|+|+++.+++.|++++...+....
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 345678999999999999998887643 4899999999999999999875421000
Q ss_pred cccce-eeeeeccccccC-CC---CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 364 RELKV-SPLVCNVRQLCF-KP---ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 364 ~~~~i-~~~~~Da~~l~~-~~---~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+...+ .+.++|+.+.++ .+ ++||+|+++--...-.. . ..-+..+++++.++|+|| |++++..
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~---~-~~~~~~~l~~~~~~Lkpg-G~li~~~ 198 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACP---D-LPAYRTALRNLGSLLKPG-GFLVMVD 198 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS---S-HHHHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcC---C-hHHHHHHHHHHHhhCCCC-cEEEEEe
Confidence 00126 788999988643 44 78999999643210000 1 223567888999999999 9988754
No 228
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.09 E-value=7.1e-10 Score=111.99 Aligned_cols=115 Identities=17% Similarity=0.029 Sum_probs=86.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCC-c-ccceeeeeeccccc-cCCCCCeeE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLN-R-ELKVSPLVCNVRQL-CFKPACVDG 387 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~-~-~~~i~~~~~Da~~l-~~~~~~~D~ 387 (494)
.+.+|||+|||+|.++.+++...+...++++|+|+.+++.|++|+...+. + . ..+++++.+|+.+. +..+++||+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~--~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ--GAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT--TGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc--ccccCCceEEEEchHHHHHHhcCCCccE
Confidence 45799999999999999998876678999999999999999999864210 1 1 24678999999874 333578999
Q ss_pred EEEcCCCccccCCccchHHH-HHHHHHHHhhcccCCCcEEEEEe
Q psy19 388 IVTDLPFGKRVGSKSNNFLL-YRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~l-y~~fL~~l~rvLkpg~G~lvllt 430 (494)
|++|+|........ ...+ ...|++.+.++|+|| |.+++.+
T Consensus 155 Ii~d~~~~~~~~~~--~~~l~~~~~l~~~~~~Lkpg-G~lv~~~ 195 (314)
T 1uir_A 155 VIIDLTDPVGEDNP--ARLLYTVEFYRLVKAHLNPG-GVMGMQT 195 (314)
T ss_dssp EEEECCCCBSTTCG--GGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred EEECCCCcccccCc--chhccHHHHHHHHHHhcCCC-cEEEEEc
Confidence 99999864311111 1112 356777899999999 9988764
No 229
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.08 E-value=6.1e-10 Score=104.40 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=76.8
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
++++.+|||+|||+|.++..++.. +..|+|+|+++.+ . ...+.++++|+.+.+.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~-----~~~v~~~~~D~~~~~~~~~~~~~~ 84 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------E-----IAGVRFIRCDIFKETIFDDIDRAL 84 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------C-----CTTCEEEECCTTSSSHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------c-----CCCeEEEEccccCHHHHHHHHHHh
Confidence 578999999999999999998887 7899999999741 1 1246889999987541
Q ss_pred C---CCCeeEEEEcCCCcccc---CCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 381 K---PACVDGIVTDLPFGKRV---GSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ~---~~~~D~IVtNPPYG~r~---~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
. .++||+|++|||....- ........+...++..+.++|||| |++++.+.
T Consensus 85 ~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpG-G~lv~k~~ 140 (191)
T 3dou_A 85 REEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNG-GNVLLKQF 140 (191)
T ss_dssp HHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred hcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCC-CEEEEEEc
Confidence 1 14899999998753211 111122345667888999999999 99987544
No 230
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.07 E-value=1.6e-10 Score=116.41 Aligned_cols=92 Identities=21% Similarity=0.267 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
|.+...++....++++.+|||+|||+|+++++++..+++..++|+|+|+.|++.|++|+..++ .++.++++|+.
T Consensus 12 pvLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g------~~v~~v~~d~~ 85 (301)
T 1m6y_A 12 PVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS------DRVSLFKVSYR 85 (301)
T ss_dssp CTTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT------TTEEEEECCGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCHH
Confidence 344555666677888999999999999999999988777899999999999999999998654 35789999998
Q ss_pred ccc--CC---CCCeeEEEEcCCC
Q psy19 377 QLC--FK---PACVDGIVTDLPF 394 (494)
Q Consensus 377 ~l~--~~---~~~~D~IVtNPPY 394 (494)
.++ +. ...||.|++|||+
T Consensus 86 ~l~~~l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 86 EADFLLKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp GHHHHHHHTTCSCEEEEEEECSC
T ss_pred HHHHHHHhcCCCCCCEEEEcCcc
Confidence 874 21 1479999999997
No 231
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.06 E-value=1.4e-09 Score=106.51 Aligned_cols=117 Identities=16% Similarity=0.208 Sum_probs=80.1
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCc-----------------------
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNR----------------------- 364 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~----------------------- 364 (494)
+..++.+|||+|||+|.+.+.++... ...|+|+|+++.|++.|+++++........
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 45678899999999998877666552 136999999999999999988653210000
Q ss_pred -cccee-eeeeccccc-cC---CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 365 -ELKVS-PLVCNVRQL-CF---KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 365 -~~~i~-~~~~Da~~l-~~---~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
...+. +.++|+.+. |+ ..++||+|+++-=... +. .+ ..-+..+++++.++|||| |++++..
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~-i~--~~-~~~~~~~l~~i~r~LKPG-G~li~~~ 197 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMEC-AC--CS-LDAYRAALCNLASLLKPG-GHLVTTV 197 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH-HC--SS-HHHHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHH-hc--CC-HHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 01232 788998874 33 2468999999632110 00 01 123567888999999999 9998874
No 232
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.05 E-value=1.3e-09 Score=111.92 Aligned_cols=108 Identities=10% Similarity=0.042 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cCCCCCeeE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CFKPACVDG 387 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~~~~~~D~ 387 (494)
.+..+|||+|||+|.+++.++..+|+.+++++|+ +.+++.|++++...++ ..++.+..+|+++. |++ ++||+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~p-~~~D~ 251 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG----SERIHGHGANLLDRDVPFP-TGFDA 251 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT----GGGEEEEECCCCSSSCCCC-CCCSE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc----ccceEEEEccccccCCCCC-CCcCE
Confidence 3567999999999999999999999999999999 9999999999986653 46789999999985 455 68999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
|++.--... .. .+-...+|+++.++|+|| |+++++-
T Consensus 252 v~~~~vlh~-~~-----~~~~~~~l~~~~~~L~pg-G~l~i~e 287 (363)
T 3dp7_A 252 VWMSQFLDC-FS-----EEEVISILTRVAQSIGKD-SKVYIME 287 (363)
T ss_dssp EEEESCSTT-SC-----HHHHHHHHHHHHHHCCTT-CEEEEEE
T ss_pred EEEechhhh-CC-----HHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 998532211 11 122346778899999999 9998854
No 233
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.05 E-value=4.9e-10 Score=107.60 Aligned_cols=108 Identities=15% Similarity=0.063 Sum_probs=82.8
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCC-----
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKP----- 382 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~----- 382 (494)
...++.+|||+|||+|.++..++...+ .++|+|+++.+++.|++++.. .++.++++|+.++++..
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~ 122 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTA--------ANISYRLLDGLVPEQAAQIHSE 122 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCC--------TTEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcc--------cCceEEECcccccccccccccc
Confidence 356788999999999999999998844 899999999999999998731 24689999998864321
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
..||+|+++..+..- ...+ ...+++++.++|+|| |+++++...
T Consensus 123 ~~~d~v~~~~~~~~~--~~~~----~~~~l~~~~~~Lkpg-G~l~i~~~~ 165 (245)
T 3ggd_A 123 IGDANIYMRTGFHHI--PVEK----RELLGQSLRILLGKQ-GAMYLIELG 165 (245)
T ss_dssp HCSCEEEEESSSTTS--CGGG----HHHHHHHHHHHHTTT-CEEEEEEEC
T ss_pred cCccEEEEcchhhcC--CHHH----HHHHHHHHHHHcCCC-CEEEEEeCC
Confidence 248999998654422 1112 346777899999999 998876543
No 234
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.04 E-value=1.2e-09 Score=101.00 Aligned_cols=108 Identities=17% Similarity=0.058 Sum_probs=76.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCC---------CeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee-eecccc
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPH---------TFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL-VCNVRQ 377 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~---------~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~-~~Da~~ 377 (494)
...++.+|||+|||+|.+++.++...+. ..++|+|+++.+ .. ..+.++ ++|+..
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-----~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-----EGATFLCPADVTD 82 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-----TTCEEECSCCTTS
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-----CCCeEEEeccCCC
Confidence 3578899999999999999999988653 789999999831 11 234677 788765
Q ss_pred cc--------CCCCCeeEEEEcCCCccccC---CccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 378 LC--------FKPACVDGIVTDLPFGKRVG---SKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 378 l~--------~~~~~~D~IVtNPPYG~r~~---~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
.+ +++++||+|++|+++..... .......++..+++++.++|+|| |++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~~ 147 (196)
T 2nyu_A 83 PRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEECC
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEecC
Confidence 43 23358999999986432111 11112334467889999999999 999887654
No 235
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.04 E-value=1.1e-09 Score=104.10 Aligned_cols=103 Identities=12% Similarity=0.160 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.++.+|||+|||+|.++..++..+ ..++|+|+++.+++.|++++. .+.+.++|+..+++ +++||+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~-~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRLP----------DATLHQGDMRDFRL-GRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHCT----------TCEEEECCTTTCCC-SSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhCC----------CCEEEECCHHHccc-CCCCcEEE
Confidence 567899999999999999988874 489999999999999998752 24788999998876 57899999
Q ss_pred EcC-CCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 390 TDL-PFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 390 tNP-PYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+.. .+. .+.. ..-...+++++.++|+|| |++++...
T Consensus 106 ~~~~~~~-~~~~----~~~~~~~l~~~~~~L~pg-G~l~~~~~ 142 (239)
T 3bxo_A 106 SMFSSVG-YLKT----TEELGAAVASFAEHLEPG-GVVVVEPW 142 (239)
T ss_dssp ECTTGGG-GCCS----HHHHHHHHHHHHHTEEEE-EEEEECCC
T ss_pred EcCchHh-hcCC----HHHHHHHHHHHHHhcCCC-eEEEEEec
Confidence 632 211 1111 122457788999999999 99887644
No 236
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.04 E-value=1.7e-09 Score=120.54 Aligned_cols=132 Identities=11% Similarity=-0.021 Sum_probs=99.1
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccC--CCCccccee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSG--NLNRELKVS 369 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~--~~~~~~~i~ 369 (494)
.++.+.....++.+....++.+|||+|||+|.+++.++... +...|+|+|+++.|++.|++++..... ..+. .++.
T Consensus 703 PPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVe 781 (950)
T 3htx_A 703 PPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSAT 781 (950)
T ss_dssp SCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEE
T ss_pred chHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceE
Confidence 36666666667777666688999999999999999998875 447999999999999999998764321 0111 3689
Q ss_pred eeeeccccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 370 PLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 370 ~~~~Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
++++|+.++++.+++||+|+++--+.. +. ......+++++.++|+|| .+++.+++.
T Consensus 782 fiqGDa~dLp~~d~sFDlVV~~eVLeH-L~-----dp~l~~~L~eI~RvLKPG--~LIISTPN~ 837 (950)
T 3htx_A 782 LYDGSILEFDSRLHDVDIGTCLEVIEH-ME-----EDQACEFGEKVLSLFHPK--LLIVSTPNY 837 (950)
T ss_dssp EEESCTTSCCTTSCSCCEEEEESCGGG-SC-----HHHHHHHHHHHHHTTCCS--EEEEEECBG
T ss_pred EEECchHhCCcccCCeeEEEEeCchhh-CC-----hHHHHHHHHHHHHHcCCC--EEEEEecCc
Confidence 999999999887789999999654321 11 122446788999999996 566666654
No 237
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.03 E-value=2.3e-09 Score=105.90 Aligned_cols=129 Identities=19% Similarity=0.211 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCC----------cc--------------
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLN----------RE-------------- 365 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~----------~~-------------- 365 (494)
.++.+|||+|||+|.+.+.++.. ++..|+|+|+++.|++.|++++........ +.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 36789999999999966544442 356999999999999999997753210000 00
Q ss_pred -cceeeeeecccc-ccC-----CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe--------
Q psy19 366 -LKVSPLVCNVRQ-LCF-----KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT-------- 430 (494)
Q Consensus 366 -~~i~~~~~Da~~-l~~-----~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt-------- 430 (494)
..+.++++|+.. +|+ ++++||+|+++.-+.. +.. + ..-+..+++++.++|||| |++++..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~-~~~--~-~~~~~~~l~~~~r~LkpG-G~l~~~~~~~~~~~~ 223 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEA-VSP--D-LASFQRALDHITTLLRPG-GHLLLIGALEESWYL 223 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHH-HCS--S-HHHHHHHHHHHHTTEEEE-EEEEEEEEESCCEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhh-hcC--C-HHHHHHHHHHHHHhcCCC-CEEEEEEecCcceEE
Confidence 013466678887 553 2356999999853221 000 0 123567888999999999 9988752
Q ss_pred ----------cCHHHHHHHHHhcc
Q psy19 431 ----------SDRKHLIQALHITS 444 (494)
Q Consensus 431 ----------~~~~~l~~~l~~~~ 444 (494)
.+...+.+.+...|
T Consensus 224 ~~~~~~~~~~~~~~~l~~~l~~aG 247 (289)
T 2g72_A 224 AGEARLTVVPVSEEEVREALVRSG 247 (289)
T ss_dssp ETTEEEECCCCCHHHHHHHHHHTT
T ss_pred cCCeeeeeccCCHHHHHHHHHHcC
Confidence 13455677777766
No 238
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.03 E-value=3.2e-10 Score=118.54 Aligned_cols=93 Identities=15% Similarity=0.056 Sum_probs=72.5
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhc--cCCCCcccceeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHN--SGNLNRELKVSPLV 372 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~--g~~~~~~~~i~~~~ 372 (494)
.++.+|.....+. .+|.+|||+|||+|.+++.+|.. +..|+|+|+|+.+++.|+.|+..+ |+ .++.+++
T Consensus 79 t~e~vA~~~a~~l--~~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-----~~i~~i~ 149 (410)
T 3ll7_A 79 SGAVTSSYKSRFI--REGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEG-----KDVNILT 149 (410)
T ss_dssp CCHHHHHHGGGGS--CTTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTT-----CEEEEEE
T ss_pred CHHHHHHHHHHhc--CCCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCC-----CcEEEEE
Confidence 3444554433222 35889999999999999988876 679999999999999999999977 53 4578999
Q ss_pred eccccc-cC-CCCCeeEEEEcCCCcc
Q psy19 373 CNVRQL-CF-KPACVDGIVTDLPFGK 396 (494)
Q Consensus 373 ~Da~~l-~~-~~~~~D~IVtNPPYG~ 396 (494)
+|+.+. +. .+..||+|++||||..
T Consensus 150 ~Da~~~L~~~~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 150 GDFKEYLPLIKTFHPDYIYVDPARRS 175 (410)
T ss_dssp SCGGGSHHHHHHHCCSEEEECCEEC-
T ss_pred CcHHHhhhhccCCCceEEEECCCCcC
Confidence 999874 32 2358999999999954
No 239
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.03 E-value=2.4e-09 Score=107.55 Aligned_cols=119 Identities=11% Similarity=0.121 Sum_probs=80.7
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCc-ccceeeeeecc------ccc--cCC
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNR-ELKVSPLVCNV------RQL--CFK 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~-~~~i~~~~~Da------~~l--~~~ 381 (494)
++.+|||+|||+|..+...+.. .+..|+|+|+++.||+.|++.+...+..... .-.+++.+.|+ ..+ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4789999999999876654443 2468999999999999999988755421000 00134556655 333 244
Q ss_pred CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHH
Q psy19 382 PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHL 436 (494)
Q Consensus 382 ~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l 436 (494)
+++||+|+|.--...-... .+ ...+++++.++|||| |.+++.+++...+
T Consensus 127 ~~~FD~V~~~~~lhy~~~~-~~----~~~~l~~~~r~LkpG-G~~i~~~~~~~~~ 175 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHP-RH----YATVMNNLSELTASG-GKVLITTMDGDKL 175 (302)
T ss_dssp SSCEEEEEEESCGGGTCST-TT----HHHHHHHHHHHEEEE-EEEEEEEECHHHH
T ss_pred CCCeeEEEECchHHHhCCH-HH----HHHHHHHHHHHcCCC-CEEEEEeCCHHHH
Confidence 5799999986322111111 12 257888999999999 9999999987644
No 240
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.02 E-value=3.8e-10 Score=111.18 Aligned_cols=93 Identities=6% Similarity=-0.056 Sum_probs=72.2
Q ss_pred HHHHhCCCCC--CEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCC----cccceeeeeeccc
Q psy19 303 MVRLASPIPG--DVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLN----RELKVSPLVCNVR 376 (494)
Q Consensus 303 ll~la~~~~g--~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~----~~~~i~~~~~Da~ 376 (494)
++..++.+++ .+|||.+||+|+.++++|.. ++.|+|+|+++.++..++.|++.+..+.. +..+++++++|+.
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~ 155 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL 155 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH
Confidence 4445566677 89999999999999999988 67899999999998888888875532211 2246889999998
Q ss_pred cc-cCCCCCeeEEEEcCCCccc
Q psy19 377 QL-CFKPACVDGIVTDLPFGKR 397 (494)
Q Consensus 377 ~l-~~~~~~~D~IVtNPPYG~r 397 (494)
++ +.....||+|++||||..+
T Consensus 156 ~~L~~~~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 156 TALTDITPRPQVVYLDPMFPHK 177 (258)
T ss_dssp HHSTTCSSCCSEEEECCCCCCC
T ss_pred HHHHhCcccCCEEEEcCCCCCc
Confidence 75 3212479999999999654
No 241
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.02 E-value=1.3e-09 Score=110.04 Aligned_cols=110 Identities=10% Similarity=-0.045 Sum_probs=87.3
Q ss_pred hCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCee
Q psy19 307 ASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVD 386 (494)
Q Consensus 307 a~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D 386 (494)
..+.+..+|||+|||+|.+++.++..+|+..++++|+ +.+++.|++++...++ ..++++..+|+. .+++. .||
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~-~~~p~-~~D 237 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL----SGRAQVVVGSFF-DPLPA-GAG 237 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTT-SCCCC-SCS
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc----CcCeEEecCCCC-CCCCC-CCc
Confidence 3455678999999999999999999999999999999 9999999999987654 456899999997 34543 899
Q ss_pred EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+|++.--... .. .+-...+++++.++|+|| |+++++.
T Consensus 238 ~v~~~~vlh~-~~-----~~~~~~~l~~~~~~L~pg-G~l~i~e 274 (332)
T 3i53_A 238 GYVLSAVLHD-WD-----DLSAVAILRRCAEAAGSG-GVVLVIE 274 (332)
T ss_dssp EEEEESCGGG-SC-----HHHHHHHHHHHHHHHTTT-CEEEEEE
T ss_pred EEEEehhhcc-CC-----HHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 9998543221 11 122456788999999999 9998864
No 242
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.02 E-value=1e-09 Score=103.27 Aligned_cols=107 Identities=7% Similarity=0.069 Sum_probs=83.0
Q ss_pred HHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc--ccC
Q psy19 303 MVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ--LCF 380 (494)
Q Consensus 303 ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~--l~~ 380 (494)
++.+.. .++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+.+.. .+.++|+.. .++
T Consensus 25 l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~~------------~~~~~d~~~~~~~~ 89 (230)
T 3cc8_A 25 LLKHIK-KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKLD------------HVVLGDIETMDMPY 89 (230)
T ss_dssp HHTTCC-TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTSS------------EEEESCTTTCCCCS
T ss_pred HHHHhc-cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCC------------cEEEcchhhcCCCC
Confidence 334433 57789999999999999998877 4899999999999999987642 467788876 456
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
++++||+|+++-.+.. +. + ...++.++.++|+|| |.+++.+++.
T Consensus 90 ~~~~fD~v~~~~~l~~-~~---~----~~~~l~~~~~~L~~g-G~l~~~~~~~ 133 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEH-LF---D----PWAVIEKVKPYIKQN-GVILASIPNV 133 (230)
T ss_dssp CTTCEEEEEEESCGGG-SS---C----HHHHHHHTGGGEEEE-EEEEEEEECT
T ss_pred CCCccCEEEECChhhh-cC---C----HHHHHHHHHHHcCCC-CEEEEEeCCc
Confidence 6678999999755432 11 2 236777899999999 9999988764
No 243
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.02 E-value=2.3e-10 Score=110.78 Aligned_cols=111 Identities=8% Similarity=-0.131 Sum_probs=84.3
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc----CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 297 PTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS----YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 297 e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~----~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
+..+..|..+....++.+|||+|||+|.+++.+|.. +++.+|+|+|+++.+++.|+ +. ..++.+++
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~----~~~v~~~~ 136 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SD----MENITLHQ 136 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GG----CTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------cc----CCceEEEE
Confidence 555555555554445679999999999999998876 67889999999999998887 11 23578999
Q ss_pred eccccc---cCCC-CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhh-cccCCCcEEEEE
Q psy19 373 CNVRQL---CFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGK-IVRPQIGRAILL 429 (494)
Q Consensus 373 ~Da~~l---~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~r-vLkpg~G~lvll 429 (494)
+|+.+. +... .+||+|++|... .+ +..++.++.+ +|+|| |++++.
T Consensus 137 gD~~~~~~l~~~~~~~fD~I~~d~~~-------~~----~~~~l~~~~r~~LkpG-G~lv~~ 186 (236)
T 2bm8_A 137 GDCSDLTTFEHLREMAHPLIFIDNAH-------AN----TFNIMKWAVDHLLEEG-DYFIIE 186 (236)
T ss_dssp CCSSCSGGGGGGSSSCSSEEEEESSC-------SS----HHHHHHHHHHHTCCTT-CEEEEC
T ss_pred CcchhHHHHHhhccCCCCEEEECCch-------Hh----HHHHHHHHHHhhCCCC-CEEEEE
Confidence 999884 4322 379999998641 12 4567778997 99999 998874
No 244
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.00 E-value=1.4e-09 Score=109.66 Aligned_cols=117 Identities=16% Similarity=0.042 Sum_probs=92.5
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
..+..++....+.+ .+|||+|||+|.+++.++..+|+..++++|+ +.+++.|++++...++ ..++.+..+|+.+
T Consensus 155 ~~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~ 228 (334)
T 2ip2_A 155 LAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA----GERVSLVGGDMLQ 228 (334)
T ss_dssp HHHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH----TTSEEEEESCTTT
T ss_pred HHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC----CCcEEEecCCCCC
Confidence 34556666666766 8999999999999999999888899999999 9999999999886653 3567899999987
Q ss_pred ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 378 LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 378 l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+++ ..||+|++.-.... .. ..-...+++++.++|+|| |++++.
T Consensus 229 -~~~-~~~D~v~~~~vl~~-~~-----~~~~~~~l~~~~~~L~pg-G~l~i~ 271 (334)
T 2ip2_A 229 -EVP-SNGDIYLLSRIIGD-LD-----EAASLRLLGNCREAMAGD-GRVVVI 271 (334)
T ss_dssp -CCC-SSCSEEEEESCGGG-CC-----HHHHHHHHHHHHHHSCTT-CEEEEE
T ss_pred -CCC-CCCCEEEEchhccC-CC-----HHHHHHHHHHHHHhcCCC-CEEEEE
Confidence 554 67999998654321 11 122356778899999999 999887
No 245
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.00 E-value=1.7e-09 Score=109.91 Aligned_cols=117 Identities=15% Similarity=0.085 Sum_probs=91.2
Q ss_pred HHHHHhCCCC-CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-
Q psy19 302 NMVRLASPIP-GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC- 379 (494)
Q Consensus 302 ~ll~la~~~~-g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~- 379 (494)
.++....+.+ +.+|||+|||+|.++..++..+|+..++++|+ +.+++.|++++...++ ..++.+..+|+.+.+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL----GGRVEFFEKNLLDARN 243 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC----GGGEEEEECCTTCGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC----CCceEEEeCCcccCcc
Confidence 3444445556 78999999999999999999999999999999 8899999999987654 457899999999875
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+..+.||+|++.--... .. ..-...+++++.++|+|| |+++++.
T Consensus 244 ~~~~~~D~v~~~~vlh~-~~-----~~~~~~~l~~~~~~L~pg-G~l~i~e 287 (352)
T 3mcz_A 244 FEGGAADVVMLNDCLHY-FD-----AREAREVIGHAAGLVKPG-GALLILT 287 (352)
T ss_dssp GTTCCEEEEEEESCGGG-SC-----HHHHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred cCCCCccEEEEeccccc-CC-----HHHHHHHHHHHHHHcCCC-CEEEEEE
Confidence 12357999999643321 11 122457788999999999 9998864
No 246
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.00 E-value=7.3e-10 Score=110.36 Aligned_cols=93 Identities=11% Similarity=0.129 Sum_probs=76.7
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCC--CeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPH--TFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~--~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
..+.++..++..+.+.++.+|||+|||+|.+...++...+. ..++|+|+|+.+++.+++|. . .++++++
T Consensus 26 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~-------~~v~~i~ 96 (279)
T 3uzu_A 26 VDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G-------ELLELHA 96 (279)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G-------GGEEEEE
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C-------CCcEEEE
Confidence 57788999999999999999999999999999998877321 33999999999999999994 1 2468999
Q ss_pred eccccccCCCC------CeeEEEEcCCCcc
Q psy19 373 CNVRQLCFKPA------CVDGIVTDLPFGK 396 (494)
Q Consensus 373 ~Da~~l~~~~~------~~D~IVtNPPYG~ 396 (494)
+|+.++++++- ....||+||||..
T Consensus 97 ~D~~~~~~~~~~~~~~~~~~~vv~NlPY~i 126 (279)
T 3uzu_A 97 GDALTFDFGSIARPGDEPSLRIIGNLPYNI 126 (279)
T ss_dssp SCGGGCCGGGGSCSSSSCCEEEEEECCHHH
T ss_pred CChhcCChhHhcccccCCceEEEEccCccc
Confidence 99999875421 3468999999974
No 247
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.97 E-value=1.3e-09 Score=111.89 Aligned_cols=121 Identities=14% Similarity=0.087 Sum_probs=86.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhcc---CCCCcccceeeeeeccccccC----CCC
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNS---GNLNRELKVSPLVCNVRQLCF----KPA 383 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g---~~~~~~~~i~~~~~Da~~l~~----~~~ 383 (494)
.+.+|||+|||+|+++.+++...+ ..|+++|+|+.+++.|++|+...+ ++.....+++++.+|++..-. ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 467999999999999999887654 789999999999999999986332 110111268999999988631 246
Q ss_pred CeeEEEEcCCC-ccccCC-ccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 384 CVDGIVTDLPF-GKRVGS-KSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 384 ~~D~IVtNPPY-G~r~~~-~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
+||+||+|||. ...... .--..++|+.+++.+.++|+|| |.+++-++..
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pg-Gilv~qs~s~ 317 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQD-GKYFTQGNCV 317 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEE-EEEEEEEEET
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCC-cEEEEEcCCc
Confidence 89999999975 211111 1122566776666669999999 9988866543
No 248
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.97 E-value=7.6e-10 Score=108.36 Aligned_cols=92 Identities=10% Similarity=0.124 Sum_probs=76.8
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
..+.++..++..+.+.++.+|||+|||+|.+..+++.. +...++|+|+|+.+++.+++| . ..+++++++|
T Consensus 15 ~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~--------~~~v~~i~~D 84 (249)
T 3ftd_A 15 VSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G--------DERLEVINED 84 (249)
T ss_dssp ECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C--------CTTEEEECSC
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c--------CCCeEEEEcc
Confidence 56889999999999999999999999999999998876 247999999999999999987 2 1346899999
Q ss_pred cccccCCCC-CeeEEEEcCCCcc
Q psy19 375 VRQLCFKPA-CVDGIVTDLPFGK 396 (494)
Q Consensus 375 a~~l~~~~~-~~D~IVtNPPYG~ 396 (494)
+.++++++. ....||+||||..
T Consensus 85 ~~~~~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 85 ASKFPFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp TTTCCGGGSCSSEEEEEECCTTT
T ss_pred hhhCChhHccCCcEEEEECchhc
Confidence 999876531 1348999999964
No 249
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.95 E-value=5.3e-09 Score=108.86 Aligned_cols=119 Identities=8% Similarity=0.018 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecc
Q psy19 296 KPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNV 375 (494)
Q Consensus 296 ~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da 375 (494)
...++..++......++.+|||+|||+|.++..++.. +..++|+|+++.+++.|+++ ++. . ....+...++
T Consensus 92 ~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~----~~~--~-~~~~~~~~~~ 162 (416)
T 4e2x_A 92 FAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK----GIR--V-RTDFFEKATA 162 (416)
T ss_dssp HHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT----TCC--E-ECSCCSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc----CCC--c-ceeeechhhH
Confidence 3455666777777778899999999999999998876 67999999999999999876 221 0 0112344566
Q ss_pred ccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 376 RQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 376 ~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
..+++++++||+|+++--+.. + .+ ...+++++.++|+|| |.+++.+++
T Consensus 163 ~~l~~~~~~fD~I~~~~vl~h-~---~d----~~~~l~~~~r~Lkpg-G~l~i~~~~ 210 (416)
T 4e2x_A 163 DDVRRTEGPANVIYAANTLCH-I---PY----VQSVLEGVDALLAPD-GVFVFEDPY 210 (416)
T ss_dssp HHHHHHHCCEEEEEEESCGGG-C---TT----HHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred hhcccCCCCEEEEEECChHHh-c---CC----HHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 666666689999999754331 1 12 457788999999999 999987664
No 250
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.95 E-value=6.6e-10 Score=109.03 Aligned_cols=91 Identities=11% Similarity=0.133 Sum_probs=75.1
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCe--EEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTF--FVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~--v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
..+.+++.|+..+.+.++++|||+|||+|.+.. ++. +.. ++|+|+|+.+++.+++|+... .++++++
T Consensus 5 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~---~~~~~v~avEid~~~~~~a~~~~~~~-------~~v~~i~ 73 (252)
T 1qyr_A 5 NDQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG---ERLDQLTVIELDRDLAARLQTHPFLG-------PKLTIYQ 73 (252)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH---TTCSCEEEECCCHHHHHHHHTCTTTG-------GGEEEEC
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh---CCCCeEEEEECCHHHHHHHHHHhccC-------CceEEEE
Confidence 467889999999999999999999999999999 654 245 999999999999999887531 3578999
Q ss_pred eccccccCCC-----CCeeEEEEcCCCcc
Q psy19 373 CNVRQLCFKP-----ACVDGIVTDLPFGK 396 (494)
Q Consensus 373 ~Da~~l~~~~-----~~~D~IVtNPPYG~ 396 (494)
+|+.++++++ +..+.||+||||..
T Consensus 74 ~D~~~~~~~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 74 QDAMTFNFGELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp SCGGGCCHHHHHHHHTSCEEEEEECCTTT
T ss_pred CchhhCCHHHhhcccCCceEEEECCCCCc
Confidence 9999876532 24589999999974
No 251
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.94 E-value=3.2e-09 Score=100.44 Aligned_cols=95 Identities=18% Similarity=0.130 Sum_probs=76.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVT 390 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IVt 390 (494)
++.+|||+|||+|.++..++.. +|+|+++.+++.|+.+ + +.+.++|+..+++++++||+|++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----~--------~~~~~~d~~~~~~~~~~fD~v~~ 108 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----G--------VFVLKGTAENLPLKDESFDFALM 108 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----T--------CEEEECBTTBCCSCTTCEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----C--------CEEEEcccccCCCCCCCeeEEEE
Confidence 4789999999999998876543 8999999999999987 2 36888999888877779999999
Q ss_pred cCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 391 DLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 391 NPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+-.+.. + .+ ...+++++.++|+|| |.+++.+++
T Consensus 109 ~~~l~~-~---~~----~~~~l~~~~~~L~pg-G~l~i~~~~ 141 (219)
T 1vlm_A 109 VTTICF-V---DD----PERALKEAYRILKKG-GYLIVGIVD 141 (219)
T ss_dssp ESCGGG-S---SC----HHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred cchHhh-c---cC----HHHHHHHHHHHcCCC-cEEEEEEeC
Confidence 865432 1 12 246777899999999 999887654
No 252
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.94 E-value=7.3e-09 Score=97.32 Aligned_cols=126 Identities=21% Similarity=0.277 Sum_probs=88.8
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeE
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDG 387 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~ 387 (494)
...++.+|||+|||+|.++..++ ..++|+|+++. + +.+.++|+.++++++++||+
T Consensus 64 ~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------~--------~~~~~~d~~~~~~~~~~fD~ 118 (215)
T 2zfu_A 64 QRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------D--------PRVTVCDMAQVPLEDESVDV 118 (215)
T ss_dssp TSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------S--------TTEEESCTTSCSCCTTCEEE
T ss_pred ccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------C--------ceEEEeccccCCCCCCCEeE
Confidence 34567899999999999987652 57999999987 1 25788899888877789999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec-----CHHHHHHHHHhccccceeeeeEEEccCCceE
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS-----DRKHLIQALHITSALWKCRKQIKINMSGMKS 462 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~-----~~~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~ 462 (494)
|+++..+. . .+ ...+++++.++|+|| |++++... ....+...+...| +.... .... ++ ..
T Consensus 119 v~~~~~l~--~---~~----~~~~l~~~~~~L~~g-G~l~i~~~~~~~~~~~~~~~~l~~~G--f~~~~-~~~~-~~-~~ 183 (215)
T 2zfu_A 119 AVFCLSLM--G---TN----IRDFLEEANRVLKPG-GLLKVAEVSSRFEDVRTFLRAVTKLG--FKIVS-KDLT-NS-HF 183 (215)
T ss_dssp EEEESCCC--S---SC----HHHHHHHHHHHEEEE-EEEEEEECGGGCSCHHHHHHHHHHTT--EEEEE-EECC-ST-TC
T ss_pred EEEehhcc--c---cC----HHHHHHHHHHhCCCC-eEEEEEEcCCCCCCHHHHHHHHHHCC--CEEEE-EecC-CC-eE
Confidence 99987653 1 22 346777899999999 99988654 3355777777766 34333 2222 22 23
Q ss_pred EEEEEeeCCCC
Q psy19 463 FVFILNRTADL 473 (494)
Q Consensus 463 ~i~v~~~~~~~ 473 (494)
.++++.+....
T Consensus 184 ~~~~~~k~~~~ 194 (215)
T 2zfu_A 184 FLFDFQKTGPP 194 (215)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEEecCcc
Confidence 56666665443
No 253
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.93 E-value=9.8e-10 Score=109.17 Aligned_cols=112 Identities=12% Similarity=0.047 Sum_probs=76.8
Q ss_pred CCCEEEEEcCCcCh----HHHHHHhcCC----CCeEEEEeCCHHHHHHHHHHHHhc----cC------------------
Q psy19 311 PGDVFLDPMCGGGT----IPVECSLSYP----HTFFVCGDINEKLVLKTQANVLHN----SG------------------ 360 (494)
Q Consensus 311 ~g~~VLDP~CGSGt----ilIEAA~~~~----~~~v~G~Did~~al~~Ar~Nl~~~----g~------------------ 360 (494)
++.+|+|+|||||. +++.++...+ +..|+|+|+|+.|++.|++++-.. ++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45789999999997 5555544322 358999999999999999986210 00
Q ss_pred ----CCCcccceeeeeeccccccCC-CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 361 ----NLNRELKVSPLVCNVRQLCFK-PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 361 ----~~~~~~~i~~~~~Da~~l~~~-~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
...+...+.|.++|+.+.+++ .+.||+|+|.-= +..- ......++++.+.+.|+|| |.+++-
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnv----liyf--~~~~~~~vl~~~~~~L~pg-G~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNV----MIYF--DKTTQEDILRRFVPLLKPD-GLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSS----GGGS--CHHHHHHHHHHHGGGEEEE-EEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCc----hHhC--CHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence 000113588999999886554 468999999310 0000 1234567888999999999 987663
No 254
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.93 E-value=1.4e-08 Score=100.43 Aligned_cols=107 Identities=12% Similarity=0.034 Sum_probs=80.5
Q ss_pred CCCEEEEEcCCc---ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc--------
Q psy19 311 PGDVFLDPMCGG---GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-------- 379 (494)
Q Consensus 311 ~g~~VLDP~CGS---GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-------- 379 (494)
+...|||+|||+ |.+...++..+|+.+|+|+|+++.|++.|++++.. ..++.++++|+.+.+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~~~~~D~~~~~~~~~~~~~ 149 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-------DPNTAVFTADVRDPEYILNHPDV 149 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------CTTEEEEECCTTCHHHHHHSHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------CCCeEEEEeeCCCchhhhccchh
Confidence 457999999999 99877666777889999999999999999999852 135789999987531
Q ss_pred ---CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 380 ---FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 380 ---~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
++..+||+|+++--+.. +... + ...+++++.++|+|| |++++...
T Consensus 150 ~~~~d~~~~d~v~~~~vlh~-~~d~-~----~~~~l~~~~~~L~pG-G~l~i~~~ 197 (274)
T 2qe6_A 150 RRMIDFSRPAAIMLVGMLHY-LSPD-V----VDRVVGAYRDALAPG-SYLFMTSL 197 (274)
T ss_dssp HHHCCTTSCCEEEETTTGGG-SCTT-T----HHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred hccCCCCCCEEEEEechhhh-CCcH-H----HHHHHHHHHHhCCCC-cEEEEEEe
Confidence 22247999999753321 1211 2 345677899999999 99887544
No 255
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.92 E-value=1.5e-09 Score=102.13 Aligned_cols=104 Identities=11% Similarity=-0.012 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.+..+|||+|||+|.+++..+...|++.++|+|+|+.|++.|++|+..+|+ ..++.+ .|....+ +.+.||+|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~----~~~v~~--~d~~~~~-~~~~~DvVL 120 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT----TIKYRF--LNKESDV-YKGTYDVVF 120 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC----SSEEEE--ECCHHHH-TTSEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC----CccEEE--ecccccC-CCCCcChhh
Confidence 457799999999999999998888999999999999999999999998875 223333 6665543 347899999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
..-=+..- .. -+..+..+.+.|+|| |.++-.
T Consensus 121 a~k~LHlL-~~-------~~~al~~v~~~L~pg-gvfISf 151 (200)
T 3fzg_A 121 LLKMLPVL-KQ-------QDVNILDFLQLFHTQ-NFVISF 151 (200)
T ss_dssp EETCHHHH-HH-------TTCCHHHHHHTCEEE-EEEEEE
T ss_pred HhhHHHhh-hh-------hHHHHHHHHHHhCCC-CEEEEe
Confidence 85322110 00 011223588899997 755443
No 256
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.92 E-value=3.7e-09 Score=108.84 Aligned_cols=127 Identities=14% Similarity=0.100 Sum_probs=97.7
Q ss_pred HHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCC-Ccccceeeeeecccccc-CCC
Q psy19 305 RLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNL-NRELKVSPLVCNVRQLC-FKP 382 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~-~~~~~i~~~~~Da~~l~-~~~ 382 (494)
.+..+++|++|||.|||.|+=.+.+|.......|++.|+++.-+...++|++.++... .....+.+...|+..++ ...
T Consensus 142 ~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~ 221 (359)
T 4fzv_A 142 LALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEG 221 (359)
T ss_dssp HHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHST
T ss_pred HHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcc
Confidence 3457899999999999999888877777656689999999999999999999887521 12245778889998874 334
Q ss_pred CCeeEEEEcCCC-cc----ccCCc-----------cchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 383 ACVDGIVTDLPF-GK----RVGSK-----------SNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 383 ~~~D~IVtNPPY-G~----r~~~~-----------~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
+.||.|+.|+|= |. +-... ..+..+-..+|..+.++|||| |+++..|+.
T Consensus 222 ~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpG-G~LVYsTCS 286 (359)
T 4fzv_A 222 DTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPG-GHVVYSTCS 286 (359)
T ss_dssp TCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEE-EEEEEEESC
T ss_pred ccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCC-cEEEEEeCC
Confidence 689999999994 21 11000 123456678999999999999 999999883
No 257
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.87 E-value=5.1e-09 Score=103.77 Aligned_cols=110 Identities=11% Similarity=0.008 Sum_probs=75.2
Q ss_pred CCCCEEEEEcCCcChHHHH----HHhcCCCCeE--EEEeCCHHHHHHHHHHHHhc-cCCCCcccceeeeeecccccc---
Q psy19 310 IPGDVFLDPMCGGGTIPVE----CSLSYPHTFF--VCGDINEKLVLKTQANVLHN-SGNLNRELKVSPLVCNVRQLC--- 379 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIE----AA~~~~~~~v--~G~Did~~al~~Ar~Nl~~~-g~~~~~~~~i~~~~~Da~~l~--- 379 (494)
.++.+|||+|||+|.+... .+..+++..+ +|+|.++.|++.|++++... ++. ...+.+..+|+..++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE---NVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT---TEEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC---cceEEEEecchhhhhhhh
Confidence 4677999999999976543 2333456654 99999999999999998643 210 012334566665543
Q ss_pred ---CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 380 ---FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 380 ---~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+.+++||+|++.--.. .-.+ ...+|+++.++|||| |+++++..
T Consensus 128 ~~~~~~~~fD~V~~~~~l~----~~~d----~~~~l~~~~r~Lkpg-G~l~i~~~ 173 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLY----YVKD----IPATLKFFHSLLGTN-AKMLIIVV 173 (292)
T ss_dssp HTTTCCCCEEEEEEESCGG----GCSC----HHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred ccccCCCceeEEEEeeeee----ecCC----HHHHHHHHHHHcCCC-cEEEEEEe
Confidence 4567999999964322 1123 346777899999999 99988654
No 258
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.86 E-value=2.3e-08 Score=100.08 Aligned_cols=115 Identities=16% Similarity=0.089 Sum_probs=79.1
Q ss_pred CCCCCCEEEEEcCCc------ChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceee-eeecccccc
Q psy19 308 SPIPGDVFLDPMCGG------GTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSP-LVCNVRQLC 379 (494)
Q Consensus 308 ~~~~g~~VLDP~CGS------GtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~-~~~Da~~l~ 379 (494)
.++++.+|||+|||| |+ .+ ++...+ +..|+|+|+++. + . .+.+ +++|+.+++
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs-~~-~a~~~~~~~~V~gvDis~~-v---------~--------~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT-AV-LRQWLPTGTLLVDSDLNDF-V---------S--------DADSTLIGDCATVH 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH-HH-HHHHSCTTCEEEEEESSCC-B---------C--------SSSEEEESCGGGCC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH-HH-HHHHcCCCCEEEEEECCCC-C---------C--------CCEEEEECccccCC
Confidence 467899999999955 77 33 343433 679999999997 1 1 2468 999999886
Q ss_pred CCCCCeeEEEEcCCC---ccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec---CHHHHHHHHHhcc
Q psy19 380 FKPACVDGIVTDLPF---GKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS---DRKHLIQALHITS 444 (494)
Q Consensus 380 ~~~~~~D~IVtNPPY---G~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~---~~~~l~~~l~~~~ 444 (494)
+. ++||+|++|++. |.+.........++..+++++.++|||| |++++... ....+...+...+
T Consensus 120 ~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpG-G~~v~~~~~~~~~~~l~~~l~~~G 188 (290)
T 2xyq_A 120 TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG-GSIAVKITEHSWNADLYKLMGHFS 188 (290)
T ss_dssp CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEE-EEEEEEECSSSCCHHHHHHHTTEE
T ss_pred cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCC-cEEEEEEeccCCHHHHHHHHHHcC
Confidence 64 689999999753 2121122222346778899999999999 99998552 2334555665544
No 259
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.85 E-value=2.8e-08 Score=101.13 Aligned_cols=114 Identities=12% Similarity=-0.004 Sum_probs=83.2
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC 379 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~ 379 (494)
+..++....+.++.+|||+|||+|.+++.++..+|+..++++|+ +.++. +.++... +...++.+..+|++ .+
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~----~~~~~v~~~~~d~~-~~ 244 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAP----DVAGRWKVVEGDFL-RE 244 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCG----GGTTSEEEEECCTT-TC
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccccccc----CCCCCeEEEecCCC-CC
Confidence 33456666778889999999999999999999999899999999 55544 3333322 23456899999997 34
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.+ +||+|++.--+.. .. ..-...+|+++.++|+|| |+++++.
T Consensus 245 ~p--~~D~v~~~~vlh~-~~-----d~~~~~~L~~~~~~Lkpg-G~l~i~e 286 (348)
T 3lst_A 245 VP--HADVHVLKRILHN-WG-----DEDSVRILTNCRRVMPAH-GRVLVID 286 (348)
T ss_dssp CC--CCSEEEEESCGGG-SC-----HHHHHHHHHHHHHTCCTT-CEEEEEE
T ss_pred CC--CCcEEEEehhccC-CC-----HHHHHHHHHHHHHhcCCC-CEEEEEE
Confidence 44 8999999643321 11 112357788999999999 9998864
No 260
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.80 E-value=6.5e-09 Score=102.42 Aligned_cols=100 Identities=9% Similarity=-0.116 Sum_probs=78.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhc--cCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHN--SGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~--g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
.+.+|||+|||+|.++.+++.. + .+++++|+|+.+++.|++++... +. ...++++..+|+.... ++||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~---~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVK---NNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHH---TCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhcccc---CCCeEEEEechHHHHH---hhCCEE
Confidence 4579999999999999998877 6 89999999999999999886531 11 1246789999998764 689999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
|+|.+ .. . .|++.+.++|+|| |.+++-+.+
T Consensus 144 i~d~~------dp---~----~~~~~~~~~L~pg-G~lv~~~~~ 173 (262)
T 2cmg_A 144 FCLQE------PD---I----HRIDGLKRMLKED-GVFISVAKH 173 (262)
T ss_dssp EESSC------CC---H----HHHHHHHTTEEEE-EEEEEEEEC
T ss_pred EECCC------Ch---H----HHHHHHHHhcCCC-cEEEEEcCC
Confidence 99953 11 1 1666899999999 998886543
No 261
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.78 E-value=6.1e-09 Score=100.76 Aligned_cols=113 Identities=12% Similarity=0.002 Sum_probs=72.4
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+..+|-.+.....+.+|||+|||+|.++..++... ...|+|+|+++.|++.|++|...... ....++...+...+
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~----~~~~~~~~~~~~~~ 99 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVV----MEQFNFRNAVLADF 99 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEE----ECSCCGGGCCGGGC
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccc----cccceEEEeCHhHc
Confidence 44444444333456799999999999999888872 24999999999999998886543211 01111111111122
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ ...+|.+.+|..|..- ..+++++.++|||| |++++++
T Consensus 100 ~--~~~~d~~~~D~v~~~l-----------~~~l~~i~rvLkpg-G~lv~~~ 137 (232)
T 3opn_A 100 E--QGRPSFTSIDVSFISL-----------DLILPPLYEILEKN-GEVAALI 137 (232)
T ss_dssp C--SCCCSEEEECCSSSCG-----------GGTHHHHHHHSCTT-CEEEEEE
T ss_pred C--cCCCCEEEEEEEhhhH-----------HHHHHHHHHhccCC-CEEEEEE
Confidence 1 1135667777665421 35677899999999 9998873
No 262
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.77 E-value=3.9e-08 Score=100.66 Aligned_cols=118 Identities=15% Similarity=0.102 Sum_probs=88.5
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
..+..++....+.+..+|+|+|||+|.++++++..+|+.+++..|. |.+++.|++++...+ .+++++..+|+++
T Consensus 166 ~~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-----~~rv~~~~gD~~~ 239 (353)
T 4a6d_A 166 VNGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-----EEQIDFQEGDFFK 239 (353)
T ss_dssp HHHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-------CCSEEEEESCTTT
T ss_pred HHHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-----cCceeeecCcccc
Confidence 3444555555677788999999999999999999999999999998 889999999886432 4678999999987
Q ss_pred ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 378 LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 378 l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.+++ .+|++++. .+ -+.-..+-...+|+++.+.|+|| |+++++-
T Consensus 240 ~~~~--~~D~~~~~-----~v-lh~~~d~~~~~iL~~~~~al~pg-g~lli~e 283 (353)
T 4a6d_A 240 DPLP--EADLYILA-----RV-LHDWADGKCSHLLERIYHTCKPG-GGILVIE 283 (353)
T ss_dssp SCCC--CCSEEEEE-----SS-GGGSCHHHHHHHHHHHHHHCCTT-CEEEEEE
T ss_pred CCCC--CceEEEee-----ee-cccCCHHHHHHHHHHHHhhCCCC-CEEEEEE
Confidence 6544 46988872 11 11111122346778899999999 9988853
No 263
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.76 E-value=1.3e-08 Score=99.84 Aligned_cols=67 Identities=22% Similarity=0.275 Sum_probs=57.9
Q ss_pred cccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhcc
Q psy19 290 FNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNS 359 (494)
Q Consensus 290 ~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g 359 (494)
.+|++.++.|+..++.++. .+|+.||||||||||++++|+.. +.+++|+|+++.+++.|++|++.++
T Consensus 192 ~~~~~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 192 THITPKPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp ---CCCCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCCCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 4689999999999998876 68899999999999999999988 6899999999999999999998664
No 264
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.76 E-value=2.4e-09 Score=106.36 Aligned_cols=110 Identities=11% Similarity=0.006 Sum_probs=74.1
Q ss_pred hCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee--eeccccccCCCCC
Q psy19 307 ASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL--VCNVRQLCFKPAC 384 (494)
Q Consensus 307 a~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~--~~Da~~l~~~~~~ 384 (494)
...+++.+|||+|||+|.++..++.. ..|+|+|+++ ++..++++.... ......+.++ ++|+..++ +++
T Consensus 78 ~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~---~~~~~~v~~~~~~~D~~~l~--~~~ 148 (276)
T 2wa2_A 78 GGVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLV---ETFGWNLITFKSKVDVTKME--PFQ 148 (276)
T ss_dssp TSCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCC---CCTTGGGEEEECSCCGGGCC--CCC
T ss_pred CCCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhh---hhcCCCeEEEeccCcHhhCC--CCC
Confidence 34568899999999999999988876 5899999998 533332211100 0111256788 89999876 478
Q ss_pred eeEEEEcCCCccccCCccchHHHHH--HHHHHHhhcccCCCc--EEEEEe
Q psy19 385 VDGIVTDLPFGKRVGSKSNNFLLYR--LFLIEIGKIVRPQIG--RAILLT 430 (494)
Q Consensus 385 ~D~IVtNPPYG~r~~~~~~~~~ly~--~fL~~l~rvLkpg~G--~lvllt 430 (494)
||+|++|.. .. .+.. .. +.+. .+|+.+.++|+|| | .+++-+
T Consensus 149 fD~Vvsd~~-~~-~~~~-~~-d~~~~l~~L~~~~r~LkpG-G~~~~v~~~ 193 (276)
T 2wa2_A 149 ADTVLCDIG-ES-NPTA-AV-EASRTLTVLNVISRWLEYN-QGCGFCVKV 193 (276)
T ss_dssp CSEEEECCC-CC-CSCH-HH-HHHHHHHHHHHHHHHHHHS-TTCEEEEEE
T ss_pred cCEEEECCC-cC-CCch-hh-hHHHHHHHHHHHHHHhccC-CCcEEEEEe
Confidence 999999976 21 1111 11 1111 2678899999999 9 887743
No 265
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.75 E-value=1.3e-08 Score=101.97 Aligned_cols=98 Identities=15% Similarity=0.076 Sum_probs=68.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc---CCCCCee
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC---FKPACVD 386 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~---~~~~~~D 386 (494)
.++.+|||+|||||.+...++.. ....|+|+|+++.|++.+.++-... ..+...|+..++ ++..+||
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv---------~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRV---------RSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTE---------EEECSCCGGGCCGGGCTTCCCS
T ss_pred ccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCccc---------ceecccCceecchhhCCCCCCC
Confidence 36779999999999999888776 2358999999999999865532110 112223333332 2334599
Q ss_pred EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+|++|--|.. + ..+|.++.++|+|| |+++++
T Consensus 154 ~v~~d~sf~s-------l----~~vL~e~~rvLkpG-G~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFIS-------L----NLILPALAKILVDG-GQVVAL 184 (291)
T ss_dssp EEEECCSSSC-------G----GGTHHHHHHHSCTT-CEEEEE
T ss_pred EEEEEeeHhh-------H----HHHHHHHHHHcCcC-CEEEEE
Confidence 9999976531 1 35666899999999 999887
No 266
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.73 E-value=3e-09 Score=105.04 Aligned_cols=111 Identities=11% Similarity=-0.032 Sum_probs=73.7
Q ss_pred hCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee--eeccccccCCCCC
Q psy19 307 ASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL--VCNVRQLCFKPAC 384 (494)
Q Consensus 307 a~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~--~~Da~~l~~~~~~ 384 (494)
...+++.+|||+|||+|.++..++.. ..|+|+|+++ ++..++.+.... ......+.++ ++|+..++ +++
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~---~~~~~~v~~~~~~~D~~~l~--~~~ 140 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRIT---ESYGWNIVKFKSRVDIHTLP--VER 140 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCC---CBTTGGGEEEECSCCTTTSC--CCC
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhh---hccCCCeEEEecccCHhHCC--CCC
Confidence 44568899999999999999988876 6899999998 432222111000 0011146788 89999876 478
Q ss_pred eeEEEEcCCCccccCCcc-chHHHHHHHHHHHhhcccCCCc--EEEEEe
Q psy19 385 VDGIVTDLPFGKRVGSKS-NNFLLYRLFLIEIGKIVRPQIG--RAILLT 430 (494)
Q Consensus 385 ~D~IVtNPPYG~r~~~~~-~~~~ly~~fL~~l~rvLkpg~G--~lvllt 430 (494)
||+|++|.. . ..+... +..... .+|..+.++|+|| | .+++-+
T Consensus 141 fD~V~sd~~-~-~~~~~~~d~~~~l-~~L~~~~r~LkpG-G~~~fv~kv 185 (265)
T 2oxt_A 141 TDVIMCDVG-E-SSPKWSVESERTI-KILELLEKWKVKN-PSADFVVKV 185 (265)
T ss_dssp CSEEEECCC-C-CCSCHHHHHHHHH-HHHHHHHHHHHHC-TTCEEEEEE
T ss_pred CcEEEEeCc-c-cCCccchhHHHHH-HHHHHHHHHhccC-CCeEEEEEe
Confidence 999999976 2 122110 111011 2778899999999 9 887743
No 267
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.72 E-value=1.9e-08 Score=100.64 Aligned_cols=66 Identities=20% Similarity=0.242 Sum_probs=58.5
Q ss_pred cccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhc
Q psy19 290 FNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHN 358 (494)
Q Consensus 290 ~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~ 358 (494)
.+|++..+.|+..++.++. .+|+.||||||||||++++|+.. +..++|+|+++.+++.|++|+...
T Consensus 215 ~h~~~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 215 DHPAPFPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp ---CCSCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3688899999999999887 68899999999999999999987 679999999999999999999865
No 268
>2dir_A Thump domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.308.1.3
Probab=98.72 E-value=1.9e-08 Score=84.48 Aligned_cols=59 Identities=15% Similarity=0.129 Sum_probs=55.3
Q ss_pred eEEEEEEEEecCcccChHHHHHHHHHHHHhhc-CCCCCCCCCCEEEEEEEecCcceeccc
Q psy19 218 LKFRVTCNRVGKHTVTSMESERAFGGKLNDTY-FWLVDLDDYDIDINLQIRYNEAYVGLP 276 (494)
Q Consensus 218 ~tFrV~~~~~g~~~~~s~~~~~~v~~aI~d~~-~~~vdl~~pdi~i~v~l~~~~~~l~l~ 276 (494)
.||+|+++|.|+|.++|+++++.+|++|.+.+ +++|||+|||++|+|.+.++.+.+++-
T Consensus 32 ~TF~V~~kR~~k~~~~S~ei~~~vG~~i~~~~~~~kVdL~nPd~~I~VEI~~~~~~isv~ 91 (98)
T 2dir_A 32 GTFQIVYKSRNNSHVNREEVIRELAGIVCTLNSENKVDLTNPQYTVVVEIIKAVCCLSVV 91 (98)
T ss_dssp CEEEEEEECSSCCSSCHHHHHHHHHHHHHHHCTTCEECSSSCSEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEEeCCCCCCCHHHHHHHHHHHHHhhCCCCeeEcCCCCEEEEEEEeCCEEEEEEc
Confidence 39999999999889999999999999999988 789999999999999999999998874
No 269
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.71 E-value=2.7e-08 Score=102.31 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=79.9
Q ss_pred HHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc
Q psy19 301 YNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC 379 (494)
Q Consensus 301 a~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~ 379 (494)
..++.... +.++.+|||+|||+|.+++.++..+|+.+++++|+ +.+++.|+.+ .++++..+|+++ +
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~-~ 258 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----------SGVEHLGGDMFD-G 258 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTT-C
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----------CCCEEEecCCCC-C
Confidence 33444333 66778999999999999999999999999999999 8888766531 347899999987 6
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
++.+ |+|++.--... .. .+-...+|+++.++|+|| |+++++
T Consensus 259 ~p~~--D~v~~~~vlh~-~~-----~~~~~~~l~~~~~~L~pg-G~l~i~ 299 (368)
T 3reo_A 259 VPKG--DAIFIKWICHD-WS-----DEHCLKLLKNCYAALPDH-GKVIVA 299 (368)
T ss_dssp CCCC--SEEEEESCGGG-BC-----HHHHHHHHHHHHHHSCTT-CEEEEE
T ss_pred CCCC--CEEEEechhhc-CC-----HHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 6543 99998543221 11 122346788999999999 998885
No 270
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=98.71 E-value=9.7e-08 Score=96.27 Aligned_cols=59 Identities=32% Similarity=0.489 Sum_probs=56.1
Q ss_pred EEEEEEEEec-CcccChHHHHHHHHHHHHhhcCCCCCCCCCCEEEEEEEecCcceecccc
Q psy19 219 KFRVTCNRVG-KHTVTSMESERAFGGKLNDTYFWLVDLDDYDIDINLQIRYNEAYVGLPV 277 (494)
Q Consensus 219 tFrV~~~~~g-~~~~~s~~~~~~v~~aI~d~~~~~vdl~~pdi~i~v~l~~~~~~l~l~l 277 (494)
||+|+++|.| +|.|+|+++++.+|++|.+.++++||++|||++|+|.+.++.++++...
T Consensus 108 tF~Vr~kR~~k~~~~~S~ei~r~vG~~i~~~~~~~Vdl~~PD~~i~VEi~~~~~yv~~~~ 167 (307)
T 1vbk_A 108 KFRVTARRITKEFPLDSLEIQAKVGEYILNNENCEVDLKNYDIEIGIEIMQGKAYIYTEK 167 (307)
T ss_dssp EEEEEEEESSSCSSSCHHHHHHHHHHHHHHHSSCEECSSSCSEEEEEEEETTEEEEESCC
T ss_pred eEEEEEEeCCCCCCCChHHHHHHHHHHHHHHhCCceeeeCCCEEEEEEEEcCeEEEEEec
Confidence 8999999999 7899999999999999999998899999999999999999999998764
No 271
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.69 E-value=5.5e-08 Score=99.93 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=81.1
Q ss_pred HHHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 300 AYNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 300 Aa~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+..++.... +.++.+|||+|||+|.+++.++..+|+.+++++|+ +.+++.|+.+ .++.+..+|+++
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~D~~~- 255 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----------PGVTHVGGDMFK- 255 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTT-
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----------CCeEEEeCCcCC-
Confidence 344555544 67788999999999999999999999999999999 8887766531 357899999988
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+++.+ |+|++.--... . ..+-...+|+++.++|+|| |+++++
T Consensus 256 ~~p~~--D~v~~~~vlh~-~-----~d~~~~~~L~~~~~~L~pg-G~l~i~ 297 (364)
T 3p9c_A 256 EVPSG--DTILMKWILHD-W-----SDQHCATLLKNCYDALPAH-GKVVLV 297 (364)
T ss_dssp CCCCC--SEEEEESCGGG-S-----CHHHHHHHHHHHHHHSCTT-CEEEEE
T ss_pred CCCCC--CEEEehHHhcc-C-----CHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 66643 99988432110 0 1122456788999999999 999885
No 272
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.64 E-value=6.3e-08 Score=99.44 Aligned_cols=108 Identities=13% Similarity=0.090 Sum_probs=81.9
Q ss_pred HHHHHHHhC-CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 300 AYNMVRLAS-PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 300 Aa~ll~la~-~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+..++.... +.++.+|||+|||+|.++..++..+|...++++|+ +.+++.|+.. ..+.+..+|+++
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~- 263 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----------SGIEHVGGDMFA- 263 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTT-
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----------CCCEEEeCCccc-
Confidence 444555544 66788999999999999999999998899999999 9998776531 236899999987
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+++. +|+|+++-.... .. + .-...+|+++.++|+|| |++++.
T Consensus 264 ~~~~--~D~v~~~~~lh~-~~---d--~~~~~~l~~~~~~L~pg-G~l~i~ 305 (372)
T 1fp1_D 264 SVPQ--GDAMILKAVCHN-WS---D--EKCIEFLSNCHKALSPN-GKVIIV 305 (372)
T ss_dssp CCCC--EEEEEEESSGGG-SC---H--HHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCCC--CCEEEEeccccc-CC---H--HHHHHHHHHHHHhcCCC-CEEEEE
Confidence 6653 999999654321 11 1 12346788999999999 998876
No 273
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.57 E-value=2.1e-06 Score=88.28 Aligned_cols=159 Identities=12% Similarity=0.035 Sum_probs=94.4
Q ss_pred EEEEEEEEecCcccChHHHHHHHHHHHHhhc---CCCCCCCCCCE-EEEE-EEecCcceecccccccc-cccccc-c--c
Q psy19 219 KFRVTCNRVGKHTVTSMESERAFGGKLNDTY---FWLVDLDDYDI-DINL-QIRYNEAYVGLPVTQTS-LHRRNI-V--E 289 (494)
Q Consensus 219 tFrV~~~~~g~~~~~s~~~~~~v~~aI~d~~---~~~vdl~~pdi-~i~v-~l~~~~~~l~l~lsg~s-L~~Rgy-~--~ 289 (494)
.++|.+--.+... ......+++...+...+ ++..+..+|.. .+++ .+..+.+++|+.....+ -+.-|. + +
T Consensus 102 ~l~ve~~dtne~k-~l~~f~rkf~~pL~~aL~~~g~l~~~~~~~~~vlhv~f~~~~~~~vG~s~~~n~s~~~~Gi~rl~~ 180 (375)
T 4auk_A 102 ELRVEVADTNESK-ELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKF 180 (375)
T ss_dssp EEEEECCSSSTTH-HHHHHHHHHHHHHHHHHHHHTSBCSSCCTTSCEEEEEEEETTEEEEEEECTTSSCSSGGGCCCCCC
T ss_pred eEEEECCCCccch-hhhhHHHHHHHHHHHHHHhCCccccccCCCCcEEEEEEEcCCEEEEEEecCCCCCCCcCCcccccC
Confidence 5666654433211 11223444544444332 55566667653 2333 45788999998776432 222222 1 1
Q ss_pred cccccchHH--HHHHHHHHh-------CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccC
Q psy19 290 FNITTLKPT--IAYNMVRLA-------SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSG 360 (494)
Q Consensus 290 ~~~a~L~e~--lAa~ll~la-------~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~ 360 (494)
-..+|-|.. |..++..+. ..++|.++||+||+.|+..-.++.+ ++.|+|+|+.+-. ..+..
T Consensus 181 ~~~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-----~~l~~--- 250 (375)
T 4auk_A 181 PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-----QSLMD--- 250 (375)
T ss_dssp CTTSSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-----HHHHT---
T ss_pred CCCCCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-----hhhcc---
Confidence 122333322 233332221 2468999999999999999998887 7899999975421 11111
Q ss_pred CCCcccceeeeeeccccccCCCCCeeEEEEcC
Q psy19 361 NLNRELKVSPLVCNVRQLCFKPACVDGIVTDL 392 (494)
Q Consensus 361 ~~~~~~~i~~~~~Da~~l~~~~~~~D~IVtNP 392 (494)
...+.++++|++.+.+..+.+|+||||+
T Consensus 251 ----~~~V~~~~~d~~~~~~~~~~~D~vvsDm 278 (375)
T 4auk_A 251 ----TGQVTWLREDGFKFRPTRSNISWMVCDM 278 (375)
T ss_dssp ----TTCEEEECSCTTTCCCCSSCEEEEEECC
T ss_pred ----CCCeEEEeCccccccCCCCCcCEEEEcC
Confidence 1346889999999876667899999997
No 274
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.53 E-value=1.7e-07 Score=95.48 Aligned_cols=100 Identities=11% Similarity=0.064 Sum_probs=77.0
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
+.++.+|||+|||+|.++..++..+|+.+++|+|+ +.+++.|+.. ..+.+..+|+++ +++ .||+|
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~-~~p--~~D~v 250 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-----------NNLTYVGGDMFT-SIP--NADAV 250 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-----------TTEEEEECCTTT-CCC--CCSEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-----------CCcEEEeccccC-CCC--CccEE
Confidence 45678999999999999999999989899999999 9998876641 126899999977 554 39999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccC---CCcEEEEEe
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRP---QIGRAILLT 430 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkp---g~G~lvllt 430 (494)
++.-.... .. + .-...+|+++.++|+| | |+++++.
T Consensus 251 ~~~~~lh~-~~---d--~~~~~~l~~~~~~L~p~~~g-G~l~i~e 288 (352)
T 1fp2_A 251 LLKYILHN-WT---D--KDCLRILKKCKEAVTNDGKR-GKVTIID 288 (352)
T ss_dssp EEESCGGG-SC---H--HHHHHHHHHHHHHHSGGGCC-CEEEEEE
T ss_pred Eeehhhcc-CC---H--HHHHHHHHHHHHhCCCCCCC-cEEEEEE
Confidence 99644321 11 1 1234677899999999 9 9988763
No 275
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.52 E-value=2e-07 Score=93.71 Aligned_cols=107 Identities=11% Similarity=-0.036 Sum_probs=71.9
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeC----CHHHHHHHHHHHHhccCCCCcccceeeeee-ccccccCCCC
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDI----NEKLVLKTQANVLHNSGNLNRELKVSPLVC-NVRQLCFKPA 383 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Di----d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~-Da~~l~~~~~ 383 (494)
.+++.+|||+|||+|.++..+|.. ..|+|+|+ ++.++..+. .. . .+ ...+.++++ |+..++ ..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~--~--~~-~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MS--T--YG-WNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CC--S--TT-GGGEEEECSCCTTTSC--CC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hh--h--cC-CCCeEEEeccccccCC--cC
Confidence 467889999999999999988876 47999999 454331110 01 0 01 135788888 998775 36
Q ss_pred CeeEEEEcCCCccccCCc-cchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 384 CVDGIVTDLPFGKRVGSK-SNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 384 ~~D~IVtNPPYG~r~~~~-~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+||+|++|.++. .+.. .+..... .+|..+.++|||| |.+++-+.
T Consensus 148 ~fD~V~sd~~~~--~g~~~~d~~~~l-~~L~~~~~~LkpG-G~~v~kv~ 192 (305)
T 2p41_A 148 RCDTLLCDIGES--SPNPTVEAGRTL-RVLNLVENWLSNN-TQFCVKVL 192 (305)
T ss_dssp CCSEEEECCCCC--CSSHHHHHHHHH-HHHHHHHHHCCTT-CEEEEEES
T ss_pred CCCEEEECCccc--cCcchhhHHHHH-HHHHHHHHHhCCC-CEEEEEeC
Confidence 899999998753 2221 0111111 4677889999999 98887443
No 276
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.51 E-value=4.8e-07 Score=89.75 Aligned_cols=108 Identities=12% Similarity=-0.023 Sum_probs=73.8
Q ss_pred CCCEEEEEcCCcCh--HHHHHH-hcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC----C--
Q psy19 311 PGDVFLDPMCGGGT--IPVECS-LSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGt--ilIEAA-~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~----~-- 381 (494)
+...|||+|||+|| .+.+.+ ..+|+++|+++|+|+.|++.|+.++...+ ..++.++++|+.+++. +
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-----~~~~~~v~aD~~~~~~~l~~~~~ 152 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-----EGRTAYVEADMLDPASILDAPEL 152 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-----SSEEEEEECCTTCHHHHHTCHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-----CCcEEEEEecccChhhhhccccc
Confidence 34689999999743 344444 45899999999999999999999987432 2357899999987521 0
Q ss_pred CCCee-----EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 382 PACVD-----GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 382 ~~~~D-----~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
.+.|| .|++|-=+. .+....+. ..+++++.+.|+|| |.+++.
T Consensus 153 ~~~~D~~~p~av~~~avLH-~l~d~~~p----~~~l~~l~~~L~PG-G~Lvls 199 (277)
T 3giw_A 153 RDTLDLTRPVALTVIAIVH-FVLDEDDA----VGIVRRLLEPLPSG-SYLAMS 199 (277)
T ss_dssp HTTCCTTSCCEEEEESCGG-GSCGGGCH----HHHHHHHHTTSCTT-CEEEEE
T ss_pred ccccCcCCcchHHhhhhHh-cCCchhhH----HHHHHHHHHhCCCC-cEEEEE
Confidence 13344 567764322 12222222 24566899999999 998874
No 277
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.51 E-value=9.7e-08 Score=99.32 Aligned_cols=95 Identities=19% Similarity=0.117 Sum_probs=72.7
Q ss_pred CCCEEEEEcCC------cChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC--
Q psy19 311 PGDVFLDPMCG------GGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK-- 381 (494)
Q Consensus 311 ~g~~VLDP~CG------SGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~-- 381 (494)
++.+|||+||| +|...+..+.. +|++.|+|+|+++.|. .. ..++.++++|+.++++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~------~~rI~fv~GDa~dlpf~~~ 281 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD------ELRIRTIQGDQNDAEFLDR 281 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC------BTTEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc------CCCcEEEEecccccchhhh
Confidence 46799999999 77777766654 5889999999999972 11 24578999999998765
Q ss_pred ----CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 382 ----PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+++||+|++|- .. . ..-+..+|+++.++|||| |.+++.
T Consensus 282 l~~~d~sFDlVisdg---sH--~----~~d~~~aL~el~rvLKPG-GvlVi~ 323 (419)
T 3sso_A 282 IARRYGPFDIVIDDG---SH--I----NAHVRTSFAALFPHVRPG-GLYVIE 323 (419)
T ss_dssp HHHHHCCEEEEEECS---CC--C----HHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred hhcccCCccEEEECC---cc--c----chhHHHHHHHHHHhcCCC-eEEEEE
Confidence 57999999972 11 1 123567888999999999 988874
No 278
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.50 E-value=2.4e-07 Score=100.77 Aligned_cols=74 Identities=14% Similarity=0.073 Sum_probs=63.4
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cCCCCCeeEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CFKPACVDGI 388 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~~~~~~D~I 388 (494)
.+.+|||+|||+|.++..+|.. |+.|+|+|+++.+|+.|+..+...|. ..+++.++|+.++ ++.+++||+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~-----~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPD-----FAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTT-----SEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCC-----CceEEEECCHHHHhhhccCCCccEE
Confidence 4579999999999999999988 78999999999999999999986652 2478999999887 4456789999
Q ss_pred EEc
Q psy19 389 VTD 391 (494)
Q Consensus 389 VtN 391 (494)
+|.
T Consensus 139 ~~~ 141 (569)
T 4azs_A 139 IGL 141 (569)
T ss_dssp EEE
T ss_pred EEC
Confidence 994
No 279
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.44 E-value=6.8e-07 Score=86.92 Aligned_cols=72 Identities=13% Similarity=-0.091 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.+..+|||+|||+|-+++..+ +...++|+|||+.+++.++.|+..+|. ...+..+|....+++ +++|+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~------~~~~~v~D~~~~~~~-~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDW------DFTFALQDVLCAPPA-EAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTC------EEEEEECCTTTSCCC-CBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCC------CceEEEeecccCCCC-CCcchHH
Confidence 457799999999998887655 678999999999999999999987764 347888999887765 5899999
Q ss_pred Ec
Q psy19 390 TD 391 (494)
Q Consensus 390 tN 391 (494)
.+
T Consensus 174 ll 175 (253)
T 3frh_A 174 IF 175 (253)
T ss_dssp EE
T ss_pred HH
Confidence 86
No 280
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.44 E-value=3e-07 Score=90.35 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEE
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIV 389 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IV 389 (494)
.+..+|||+|||+|-|++..+...|...++|+|||+.+++.++.|+..+|+. ..+...|...-++ .+.+|+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~------~~~~v~D~~~~~p-~~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP------HRTNVADLLEDRL-DEPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC------EEEEECCTTTSCC-CSCCSEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC------ceEEEeeecccCC-CCCcchHH
Confidence 3467999999999999988777668899999999999999999999988752 4678888876554 37899999
Q ss_pred EcC
Q psy19 390 TDL 392 (494)
Q Consensus 390 tNP 392 (494)
++-
T Consensus 204 ~lk 206 (281)
T 3lcv_B 204 LLK 206 (281)
T ss_dssp ETT
T ss_pred HHH
Confidence 964
No 281
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.40 E-value=4.9e-07 Score=92.22 Aligned_cols=99 Identities=11% Similarity=0.082 Sum_probs=76.4
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEE
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGI 388 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~I 388 (494)
+.++.+|||+|||+|.++..++..+|+..++++|+ +.+++.|+. . ..+.+..+|+++ +++ .||+|
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~-~~v~~~~~d~~~-~~~--~~D~v 255 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------N-ENLNFVGGDMFK-SIP--SADAV 255 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------C-SSEEEEECCTTT-CCC--CCSEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------C-CCcEEEeCccCC-CCC--CceEE
Confidence 44668999999999999999999999899999999 788866553 1 237899999987 654 49999
Q ss_pred EEcCCCccccCCccchHHHHHHHHHHHhhcccC---CCcEEEEE
Q psy19 389 VTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRP---QIGRAILL 429 (494)
Q Consensus 389 VtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkp---g~G~lvll 429 (494)
+++-.+.. .. + .-...+|+++.++|+| | |+++++
T Consensus 256 ~~~~vlh~-~~---d--~~~~~~l~~~~~~L~p~~~g-G~l~i~ 292 (358)
T 1zg3_A 256 LLKWVLHD-WN---D--EQSLKILKNSKEAISHKGKD-GKVIII 292 (358)
T ss_dssp EEESCGGG-SC---H--HHHHHHHHHHHHHTGGGGGG-CEEEEE
T ss_pred EEcccccC-CC---H--HHHHHHHHHHHHhCCCCCCC-cEEEEE
Confidence 99755432 11 1 1234677889999999 9 998885
No 282
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=98.39 E-value=2.7e-07 Score=93.45 Aligned_cols=81 Identities=11% Similarity=0.153 Sum_probs=69.0
Q ss_pred cccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCccccee
Q psy19 290 FNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVS 369 (494)
Q Consensus 290 ~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~ 369 (494)
.+|++..+.|+..++.+.. .+|+.||||||||||.+++|... +.+.+|+|+++.+++.|+.++..++. ...
T Consensus 232 ~~~~~kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~------~~~ 302 (323)
T 1boo_A 232 AHPARFPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNNI------SEE 302 (323)
T ss_dssp CCSSCCCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSCS------CHH
T ss_pred CCCCcCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhccc------chH
Confidence 4688899999999998775 68899999999999999999888 78999999999999999999986653 235
Q ss_pred eeeecccccc
Q psy19 370 PLVCNVRQLC 379 (494)
Q Consensus 370 ~~~~Da~~l~ 379 (494)
.++.|+.+++
T Consensus 303 ~~~~~~~~i~ 312 (323)
T 1boo_A 303 KITDIYNRIL 312 (323)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6777887764
No 283
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.36 E-value=4.2e-07 Score=82.65 Aligned_cols=105 Identities=25% Similarity=0.180 Sum_probs=77.7
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC---CCCC
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF---KPAC 384 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~---~~~~ 384 (494)
+..+|..|||++||+ +++|+++.|++.|++++.. .+.+.++|+.++++ ++++
T Consensus 9 g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN---------EGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp TCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT---------TSEEEEEEGGGGGGGCCCSSC
T ss_pred CCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc---------CcEEEEechhcCccccCCCCC
Confidence 567899999999996 1389999999999988642 25789999999876 6789
Q ss_pred eeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecC------------HHHHHHHHHhccc
Q psy19 385 VDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD------------RKHLIQALHITSA 445 (494)
Q Consensus 385 ~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~------------~~~l~~~l~~~~~ 445 (494)
||+|+++--+.. +. .+. ..+++++.++|||| |++++..+. ...+.+.+...|.
T Consensus 64 fD~V~~~~~l~~-~~--~~~----~~~l~~~~r~Lkpg-G~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 64 FDIILSGLVPGS-TT--LHS----AEILAEIARILRPG-GCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EEEEEECCSTTC-CC--CCC----HHHHHHHHHHEEEE-EEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred EeEEEECChhhh-cc--cCH----HHHHHHHHHHCCCC-EEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 999999754331 10 122 46777899999999 999885441 3346666776663
No 284
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=98.36 E-value=4.1e-07 Score=92.10 Aligned_cols=67 Identities=19% Similarity=0.205 Sum_probs=57.9
Q ss_pred cccccchHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCH---HHHHHHHHHHHhcc
Q psy19 290 FNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINE---KLVLKTQANVLHNS 359 (494)
Q Consensus 290 ~~~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~---~al~~Ar~Nl~~~g 359 (494)
.+|++..+.|+..++.+.. .+|+.||||||||||.+++|... +.+.+|+|+++ ..++.|++++..++
T Consensus 222 ~~~~~kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 222 GHPTQKPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCCCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCCCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4688999999999998875 57899999999999999999988 68999999999 99999999988654
No 285
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=98.35 E-value=6e-07 Score=94.04 Aligned_cols=128 Identities=15% Similarity=0.138 Sum_probs=85.2
Q ss_pred EEEEEEEEecCc-ccChHHHHHHHHHHHHhhc-CCCCCCCCCCEEEEEEEecCcceeccc-ccc---ccccccccc-ccc
Q psy19 219 KFRVTCNRVGKH-TVTSMESERAFGGKLNDTY-FWLVDLDDYDIDINLQIRYNEAYVGLP-VTQ---TSLHRRNIV-EFN 291 (494)
Q Consensus 219 tFrV~~~~~g~~-~~~s~~~~~~v~~aI~d~~-~~~vdl~~pdi~i~v~l~~~~~~l~l~-lsg---~sL~~Rgy~-~~~ 291 (494)
||+|+++|.|+| .|+|+++++.+|++|.+.+ +++||+++||+++.+.+.++.++++-. +.| -++...+.. ..-
T Consensus 115 tF~V~~kR~~k~f~~~S~ei~r~vG~~i~~~~~~~~Vdl~~Pdi~i~vEI~~~~~~i~~~~~~g~gglpi~~~~kvlval 194 (413)
T 2c5s_A 115 TFKITVHRSYKHFPMRTMELLPEIGGHILENTEDITVDVHNPDVNVRVEIRSGYSYIMCDERMGAGGLPVGVGGKVMVLL 194 (413)
T ss_dssp EEEEEEEECCTTCSSCHHHHHHHHHHHHHTTSSSCEECSSSCSEEEEEEECSSEEEEEEEEEECCCSBCTTTTEEEEEEC
T ss_pred cEEEEEEECCCCCCCChHHHHHHHHHHHHHhCCCCeeccCCCCeEEEEEEEeceeEEEEecccCCCCCccCCCCeEEEEe
Confidence 899999999987 8999999999999999998 789999999999999999998888765 222 122211111 223
Q ss_pred cccchHHHHHHHHHHhCCCCCCEEEEEcCCcC---h--HHHHHHhcC----CCCeEEEEeCCHHH
Q psy19 292 ITTLKPTIAYNMVRLASPIPGDVFLDPMCGGG---T--IPVECSLSY----PHTFFVCGDINEKL 347 (494)
Q Consensus 292 ~a~L~e~lAa~ll~la~~~~g~~VLDP~CGSG---t--ilIEAA~~~----~~~~v~G~Did~~a 347 (494)
.+....++++.++...+.+-....+|.. +.| . ...++|... .+..++-+|+++..
T Consensus 195 SGGvDS~vll~ll~~~G~~v~av~v~~~-~~~~~~~~~~v~~~a~~l~~~~ggi~~~vv~~~~~~ 258 (413)
T 2c5s_A 195 SGGIDSPVAAYLTMKRGVSVEAVHFHSP-PFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEVQ 258 (413)
T ss_dssp CSSSHHHHHHHHHHHBTEEEEEEEEECT-TTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHHH
T ss_pred CCCChHHHHHHHHHHcCCcEEEEEEeCC-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEECcHHH
Confidence 4567777777777654432222345642 122 1 122222222 14667777876543
No 286
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.33 E-value=3e-07 Score=91.22 Aligned_cols=102 Identities=11% Similarity=-0.069 Sum_probs=76.4
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-c---CCCCCeeE
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-C---FKPACVDG 387 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~---~~~~~~D~ 387 (494)
+..+||.|+|||.+++|+... +.+++.+|.++.+++..++|+.. ..++.+++.|+... . .+...||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~-------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF-------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT-------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc-------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 456899999999999998874 57899999999999999999973 24578999997553 1 22347999
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhc--ccCCCcEEEEEec
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKI--VRPQIGRAILLTS 431 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rv--Lkpg~G~lvllt~ 431 (494)
|+.||||+..- .|.+.+..+.+. +.++ |.+++=.|
T Consensus 163 VfiDPPYe~k~--------~~~~vl~~L~~~~~r~~~-Gi~v~WYP 199 (283)
T 2oo3_A 163 IFIDPSYERKE--------EYKEIPYAIKNAYSKFST-GLYCVWYP 199 (283)
T ss_dssp EEECCCCCSTT--------HHHHHHHHHHHHHHHCTT-SEEEEEEE
T ss_pred EEECCCCCCCc--------HHHHHHHHHHHhCccCCC-eEEEEEEe
Confidence 99999998421 255555555553 3466 87777555
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.32 E-value=1.1e-06 Score=87.23 Aligned_cols=86 Identities=21% Similarity=0.247 Sum_probs=71.3
Q ss_pred HHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 298 TIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 298 ~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
.|...++....++++..++|.+||.|+...+++.. +.+++|+|.|+.|++.|++ +.. .++.++++|+.+
T Consensus 9 VLl~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~--------~rv~lv~~~f~~ 77 (285)
T 1wg8_A 9 VLYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL--------PGLTVVQGNFRH 77 (285)
T ss_dssp TTHHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC--------TTEEEEESCGGG
T ss_pred HHHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc--------CCEEEEECCcch
Confidence 45556666678889999999999999999998887 6799999999999999998 642 357899999988
Q ss_pred cc--C---CCCCeeEEEEcCCC
Q psy19 378 LC--F---KPACVDGIVTDLPF 394 (494)
Q Consensus 378 l~--~---~~~~~D~IVtNPPY 394 (494)
++ + ....+|.|++|++|
T Consensus 78 l~~~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 78 LKRHLAALGVERVDGILADLGV 99 (285)
T ss_dssp HHHHHHHTTCSCEEEEEEECSC
T ss_pred HHHHHHHcCCCCcCEEEeCCcc
Confidence 73 1 22479999999997
No 288
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.32 E-value=1.8e-05 Score=79.16 Aligned_cols=151 Identities=11% Similarity=0.084 Sum_probs=97.7
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-cCCCCCeeEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-CFKPACVDGIV 389 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~~~~~~~D~IV 389 (494)
...+||=+|-|.|+++-|++...+..+|..+|||+..++.|++-+.......--..+++++.+|++.. .-..++||+||
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 34689999999999999988766667899999999999999987643211111135789999999886 22346899999
Q ss_pred EcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec----CHHHHHHHHHhccccceeeeeEEE----ccCCce
Q psy19 390 TDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS----DRKHLIQALHITSALWKCRKQIKI----NMSGMK 461 (494)
Q Consensus 390 tNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~----~~~~l~~~l~~~~~l~~~~~~~~v----~~Ggl~ 461 (494)
.|.+-....+. .+ .-..|++.+.+.|+|+ |.++.=+. +...+...++.....+.....+.. +.||.+
T Consensus 163 ~D~~dp~~~~~--~L--~t~eFy~~~~~~L~p~-Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w 237 (294)
T 3o4f_A 163 SDCTDPIGPGE--SL--FTSAFYEGCKRCLNPG-GIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIM 237 (294)
T ss_dssp ESCCCCCCTTC--CS--SCCHHHHHHHHTEEEE-EEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCE
T ss_pred EeCCCcCCCch--hh--cCHHHHHHHHHHhCCC-CEEEEecCCcccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcce
Confidence 99864322211 11 0124556899999999 98887433 223344444333322333333333 346776
Q ss_pred EEEEE
Q psy19 462 SFVFI 466 (494)
Q Consensus 462 ~~i~v 466 (494)
..++-
T Consensus 238 ~f~~a 242 (294)
T 3o4f_A 238 TFAWA 242 (294)
T ss_dssp EEEEE
T ss_pred eheeE
Confidence 55443
No 289
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.14 E-value=5.6e-06 Score=90.81 Aligned_cols=103 Identities=15% Similarity=0.112 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCcChH---HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCee
Q psy19 311 PGDVFLDPMCGGGTI---PVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVD 386 (494)
Q Consensus 311 ~g~~VLDP~CGSGti---lIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D 386 (494)
.+.+|+|.|||+|-+ ++.|+... ..++|+|+|.++. ...|+++.+.++. .++|+++++|++++.++ +++|
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~----~dkVtVI~gd~eev~LP-EKVD 430 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEW----GSQVTVVSSDMREWVAP-EKAD 430 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTT----GGGEEEEESCTTTCCCS-SCEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccC----CCeEEEEeCcceeccCC-cccC
Confidence 345799999999988 44444432 1237899999985 4578888888764 67899999999999776 6899
Q ss_pred EEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEE
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRA 426 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~l 426 (494)
+||+.+= |.- ...+.+. ..+...-++|||| |.+
T Consensus 431 IIVSEwM-G~f-Ll~E~ml----evL~Ardr~LKPg-Gim 463 (637)
T 4gqb_A 431 IIVSELL-GSF-ADNELSP----ECLDGAQHFLKDD-GVS 463 (637)
T ss_dssp EEECCCC-BTT-BGGGCHH----HHHHHHGGGEEEE-EEE
T ss_pred EEEEEcC-ccc-ccccCCH----HHHHHHHHhcCCC-cEE
Confidence 9999752 321 1222222 3444578899998 643
No 290
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.01 E-value=1.3e-05 Score=88.35 Aligned_cols=103 Identities=17% Similarity=0.054 Sum_probs=72.4
Q ss_pred CCEEEEEcCCcChHHH---HHHh-cC---------CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 312 GDVFLDPMCGGGTIPV---ECSL-SY---------PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 312 g~~VLDP~CGSGtilI---EAA~-~~---------~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+.+|+|.|||+|-+.. .|+. .. ...+|+|+|.++.++...+.... +|. .++|+++++|++++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~----~d~VtVI~gd~eev 484 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW----KRRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT----TTCSEEEESCGGGH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC----CCeEEEEeCchhhc
Confidence 4589999999999953 3332 11 12489999999988866555444 543 56789999999998
Q ss_pred cCC-----CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEE
Q psy19 379 CFK-----PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRA 426 (494)
Q Consensus 379 ~~~-----~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~l 426 (494)
.++ .+.+|+||+-+. |.-. ..++....|..+.++|+|+ |.+
T Consensus 485 ~lp~~~~~~ekVDIIVSElm-----Gsfl-~nEL~pe~Ld~v~r~Lkp~-Gi~ 530 (745)
T 3ua3_A 485 PGIAKDRGFEQPDIIVSELL-----GSFG-DNELSPECLDGVTGFLKPT-TIS 530 (745)
T ss_dssp HHHHHHTTCCCCSEEEECCC-----BTTB-GGGSHHHHHHTTGGGSCTT-CEE
T ss_pred ccccccCCCCcccEEEEecc-----cccc-chhccHHHHHHHHHhCCCC-cEE
Confidence 662 368999999764 2211 1234556666788999998 743
No 291
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.98 E-value=8.1e-06 Score=80.10 Aligned_cols=127 Identities=13% Similarity=0.083 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHhc-------CCC-----CeEEEEeCCH---HHHH-----------HHHHHHHhcc----
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLS-------YPH-----TFFVCGDINE---KLVL-----------KTQANVLHNS---- 359 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~-------~~~-----~~v~G~Did~---~al~-----------~Ar~Nl~~~g---- 359 (494)
+++.+|||+|||+|.-++.++.. .|. ..++++|.+| +.+. .|+.++....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35578999999999887776554 342 5899999887 4444 5666665411
Q ss_pred ------CCCCcccceeeeeeccccc-cC-CC---CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 360 ------GNLNRELKVSPLVCNVRQL-CF-KP---ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 360 ------~~~~~~~~i~~~~~Da~~l-~~-~~---~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
...+ ...+.++.+|+.+. +. .. ..||+|+.|| |..... . ++ .+..++..+.++|+|| |.++.
T Consensus 139 g~~r~~~~~~-~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~-p-~l--w~~~~l~~l~~~L~pG-G~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEG-RVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKN-P-DM--WTQNLFNAMARLARPG-GTLAT 211 (257)
T ss_dssp EEEEEEEC---CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTC-G-GG--CCHHHHHHHHHHEEEE-EEEEE
T ss_pred chhheeccCC-ceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccC-h-hh--cCHHHHHHHHHHcCCC-cEEEE
Confidence 1000 13567899999874 42 22 2799999996 322211 1 11 1456788999999999 99888
Q ss_pred EecCHHHHHHHHHhcc
Q psy19 429 LTSDRKHLIQALHITS 444 (494)
Q Consensus 429 lt~~~~~l~~~l~~~~ 444 (494)
.+.... +.+.+...|
T Consensus 212 ysaa~~-vrr~L~~aG 226 (257)
T 2qy6_A 212 FTSAGF-VRRGLQEAG 226 (257)
T ss_dssp SCCBHH-HHHHHHHHT
T ss_pred EeCCHH-HHHHHHHCC
Confidence 777764 677777666
No 292
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.72 E-value=4.3e-05 Score=77.92 Aligned_cols=72 Identities=17% Similarity=0.098 Sum_probs=54.9
Q ss_pred CEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC---CCCCeeEE
Q psy19 313 DVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF---KPACVDGI 388 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~---~~~~~D~I 388 (494)
.+|+|+|||+|++.+.+....- ...++++|+|+.+++..+.|.... .++++|+.++.. +...+|+|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~----------~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHT----------QLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTS----------CEECSCGGGCCHHHHHHHCCSEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcccc----------ccccCCHHHccHhHcCcCCcCEE
Confidence 4799999999999998887621 136899999999999999997521 356778877631 11268999
Q ss_pred EEcCCC
Q psy19 389 VTDLPF 394 (494)
Q Consensus 389 VtNPPY 394 (494)
+.+||.
T Consensus 73 ~~gpPC 78 (343)
T 1g55_A 73 LMSPPC 78 (343)
T ss_dssp EECCC-
T ss_pred EEcCCC
Confidence 999994
No 293
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.66 E-value=0.00014 Score=68.77 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=74.1
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN 374 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D 374 (494)
+.+.-++.|.. ...+..+||+.|||..|+.+ |.. ++.+|+.+|.|++..+.|+.|++.+|+. -.++++++.+|
T Consensus 16 v~~~~~~~L~~--~l~~a~~VLEiGtGySTl~l--A~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~--~~~~I~~~~gd 88 (202)
T 3cvo_A 16 MPPAEAEALRM--AYEEAEVILEYGSGGSTVVA--AEL-PGKHVTSVESDRAWARMMKAWLAANPPA--EGTEVNIVWTD 88 (202)
T ss_dssp SCHHHHHHHHH--HHHHCSEEEEESCSHHHHHH--HTS-TTCEEEEEESCHHHHHHHHHHHHHSCCC--TTCEEEEEECC
T ss_pred CCHHHHHHHHH--HhhCCCEEEEECchHHHHHH--HHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCCceEEEEeC
Confidence 34444444433 22356799999997544433 443 3689999999999999999999988641 03567899998
Q ss_pred cccc---------------c--------C-CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEE
Q psy19 375 VRQL---------------C--------F-KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAI 427 (494)
Q Consensus 375 a~~l---------------~--------~-~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lv 427 (494)
+... + . ..+.||+|+.|=.+. . ..+..+.+.|+|| |.++
T Consensus 89 a~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--------~-----~~~~~~l~~l~~G-G~Iv 151 (202)
T 3cvo_A 89 IGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR--------V-----GCALATAFSITRP-VTLL 151 (202)
T ss_dssp CSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH--------H-----HHHHHHHHHCSSC-EEEE
T ss_pred chhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc--------h-----hHHHHHHHhcCCC-eEEE
Confidence 6532 1 1 126899999984321 1 2223466899999 8763
No 294
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.66 E-value=3.6e-05 Score=78.08 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=67.4
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCcChHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGGGTIPVECSLS-YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGSGtilIEAA~~-~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
...++....+++|.+++|..||.|.-..+++.. .+..+|+|+|+|+.|++.|+ ++. ..++.++++++.++
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~--------~~Rv~lv~~nF~~l 116 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID--------DPRFSIIHGPFSAL 116 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC--------CTTEEEEESCGGGH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc--------CCcEEEEeCCHHHH
Confidence 334455567889999999999999999888876 46789999999999999984 331 24678999998876
Q ss_pred c--CC----CCCeeEEEEcCCC
Q psy19 379 C--FK----PACVDGIVTDLPF 394 (494)
Q Consensus 379 ~--~~----~~~~D~IVtNPPY 394 (494)
. +. .+++|.|+.|..|
T Consensus 117 ~~~L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 117 GEYVAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp HHHHHHTTCTTCEEEEEEECSC
T ss_pred HHHHHhcCCCCcccEEEECCcc
Confidence 2 11 1369999999998
No 295
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.65 E-value=0.00017 Score=73.11 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=64.9
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC-CCCeeEEEE
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK-PACVDGIVT 390 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~-~~~~D~IVt 390 (494)
+.+++|+|||+|++.+.+.... ...++++|+|+.+++..+.|.... .++|+.++... -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~------------~~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEK------------PEGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCC------------CBSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCC------------CcCCHHHcCHhhCCCCCEEEE
Confidence 4689999999999999887763 235778999999999999997521 15677666321 125899999
Q ss_pred cCCCc------cccCCccchHHHHHHHHHHHhhcccCC
Q psy19 391 DLPFG------KRVGSKSNNFLLYRLFLIEIGKIVRPQ 422 (494)
Q Consensus 391 NPPYG------~r~~~~~~~~~ly~~fL~~l~rvLkpg 422 (494)
+||+. .+.+.......|+..+++-+ +.++|.
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i-~~~~P~ 114 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLFFDIARIV-REKKPK 114 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHHHHHHHHH-HHHCCS
T ss_pred CCCCCCcchhcccCCCcchhhHHHHHHHHHH-HhccCc
Confidence 99983 22221111123555555533 346786
No 296
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.61 E-value=0.00021 Score=73.84 Aligned_cols=97 Identities=19% Similarity=0.241 Sum_probs=65.1
Q ss_pred CEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------CCCC
Q psy19 313 DVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF--------KPAC 384 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~--------~~~~ 384 (494)
.+++|+|||+|++.+.+.... ...++++|+|+.+++..+.|... ..++++|+.++.. ....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N~~~----------~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAINFPR----------SLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHHCTT----------SEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHhCCC----------CceEecChhhcCHHHHHhhcccCCC
Confidence 479999999999998887763 23467999999999999998641 2456777776621 2357
Q ss_pred eeEEEEcCC---C---ccccCCccchHHHHHHHHHHHhhcccCC
Q psy19 385 VDGIVTDLP---F---GKRVGSKSNNFLLYRLFLIEIGKIVRPQ 422 (494)
Q Consensus 385 ~D~IVtNPP---Y---G~r~~~~~~~~~ly~~fL~~l~rvLkpg 422 (494)
+|+|+..|| | |.+ +....-..|+..+++-+ +.++|.
T Consensus 72 ~D~i~ggpPCQ~fS~ag~~-~~~d~r~~L~~~~~~~v-~~~~P~ 113 (376)
T 3g7u_A 72 IDGIIGGPPCQGFSSIGKG-NPDDSRNQLYMHFYRLV-SELQPL 113 (376)
T ss_dssp CCEEEECCCCCTTC--------CHHHHHHHHHHHHHH-HHHCCS
T ss_pred eeEEEecCCCCCcccccCC-CCCCchHHHHHHHHHHH-HHhCCC
Confidence 999999999 3 333 11112234666655533 446787
No 297
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.60 E-value=0.00028 Score=72.74 Aligned_cols=117 Identities=15% Similarity=0.077 Sum_probs=81.3
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhcc---CCCCcccceeeeeecccccc----CCCC
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNS---GNLNRELKVSPLVCNVRQLC----FKPA 383 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g---~~~~~~~~i~~~~~Da~~l~----~~~~ 383 (494)
+..+||=+|-|.|+++-|++. ++...|..+|||+..++.|++-+.... .+.....+++++.+|+...- -...
T Consensus 205 ~pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 457899999999999999876 456789999999999999998753211 11111245788999987651 1235
Q ss_pred CeeEEEEcCCCccccCCc--cchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 384 CVDGIVTDLPFGKRVGSK--SNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 384 ~~D~IVtNPPYG~r~~~~--~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
.||+||.|.+=....... ......++.|++.+.+.|+|+ |.++.=
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~-GVlv~Q 330 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQD-GKYFTQ 330 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCC-CEEEEe
Confidence 799999996522111111 122344567889999999999 987753
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.56 E-value=0.00012 Score=72.95 Aligned_cols=65 Identities=20% Similarity=0.225 Sum_probs=46.2
Q ss_pred ceeeeeeccccc-c-CCCCCeeEEEEcCCCccccCC---c---------cchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 367 KVSPLVCNVRQL-C-FKPACVDGIVTDLPFGKRVGS---K---------SNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 367 ~i~~~~~Da~~l-~-~~~~~~D~IVtNPPYG~r~~~---~---------~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
.+.++++|+.+. + +++++||+||+||||...... . .+....+..++.++.++|+|+ |.+++..++
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~-G~l~i~~~d 99 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPG-GRLVIVVGD 99 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEECC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCC-cEEEEEECC
Confidence 457899999884 2 456799999999999643211 0 011223456788999999999 999988774
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.41 E-value=0.00043 Score=70.16 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=67.3
Q ss_pred CCEEEEEcCCcChHHHHHHhcC-CCCeE-EEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC---CCCCee
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY-PHTFF-VCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF---KPACVD 386 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~-~~~~v-~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~---~~~~~D 386 (494)
.-+++|+|||.|++.+.+.... +...+ +++|+|+.+++..+.|... .++++|+.++.. +...+|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----------~~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----------EVQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----------CCBCCCTTTCCHHHHHHTCCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----------CcccCChhhcCHHHhccCCCC
Confidence 4589999999999988776652 11356 7999999999999999752 145667766632 123689
Q ss_pred EEEEcCC---C-----ccccCCccchHHHHHHHHHHHhhcc--cCC
Q psy19 387 GIVTDLP---F-----GKRVGSKSNNFLLYRLFLIEIGKIV--RPQ 422 (494)
Q Consensus 387 ~IVtNPP---Y-----G~r~~~~~~~~~ly~~fL~~l~rvL--kpg 422 (494)
+++..|| | |.+.+....-..|+..+++.+.+.+ +|.
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~ 124 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK 124 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCC
Confidence 9999999 7 4443322223356666555344455 566
No 300
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.40 E-value=0.00014 Score=65.16 Aligned_cols=78 Identities=14% Similarity=0.031 Sum_probs=58.5
Q ss_pred ccchHHHHHHHHHHhCCCCCCEEEEEcCCcCh-HHHHHHh-cCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceee
Q psy19 293 TTLKPTIAYNMVRLASPIPGDVFLDPMCGGGT-IPVECSL-SYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSP 370 (494)
Q Consensus 293 a~L~e~lAa~ll~la~~~~g~~VLDP~CGSGt-ilIEAA~-~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~ 370 (494)
.-|.+.||..+..-. .++.+|||+|||+|. .+..++. . +..|+++|+++.++. +
T Consensus 19 ~~m~e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~--------------------~ 74 (153)
T 2k4m_A 19 SHMWNDLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG--------------------I 74 (153)
T ss_dssp CHHHHHHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT--------------------E
T ss_pred hhHHHHHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc--------------------e
Confidence 346788888876544 456799999999994 8888775 5 678999999998755 5
Q ss_pred eeeccccccCCC-CCeeEE-EEcCCC
Q psy19 371 LVCNVRQLCFKP-ACVDGI-VTDLPF 394 (494)
Q Consensus 371 ~~~Da~~l~~~~-~~~D~I-VtNPPY 394 (494)
++.|+++..+.. ..+|+| -.|||-
T Consensus 75 v~dDiF~P~~~~Y~~~DLIYsirPP~ 100 (153)
T 2k4m_A 75 VRDDITSPRMEIYRGAALIYSIRPPA 100 (153)
T ss_dssp ECCCSSSCCHHHHTTEEEEEEESCCT
T ss_pred EEccCCCCcccccCCcCEEEEcCCCH
Confidence 567777642211 379999 889993
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.20 E-value=0.00071 Score=69.25 Aligned_cols=95 Identities=12% Similarity=-0.032 Sum_probs=71.9
Q ss_pred cchHHHHHHHHHHhCCCC------CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccc
Q psy19 294 TLKPTIAYNMVRLASPIP------GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELK 367 (494)
Q Consensus 294 ~L~e~lAa~ll~la~~~~------g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~ 367 (494)
-.+++++..++..++..+ ++.|||+|.|.|++...++......+++++|+|+..+...+... .. ++
T Consensus 35 L~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~-------~~ 106 (353)
T 1i4w_A 35 LWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG-------SP 106 (353)
T ss_dssp BCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT-------SS
T ss_pred cCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC-------CC
Confidence 368999999999998763 58999999999999988876433458999999999998887765 21 34
Q ss_pred eeeeeecccccc-C----CCC--------------CeeEEEEcCCCcc
Q psy19 368 VSPLVCNVRQLC-F----KPA--------------CVDGIVTDLPFGK 396 (494)
Q Consensus 368 i~~~~~Da~~l~-~----~~~--------------~~D~IVtNPPYG~ 396 (494)
+.++++|+.++. + ... ..=.||.|.||..
T Consensus 107 l~ii~~D~l~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~vvaNLPYnI 154 (353)
T 1i4w_A 107 LQILKRDPYDWSTYSNLIDEERIFVPEVQSSDHINDKFLTVANVTGEG 154 (353)
T ss_dssp CEEECSCTTCHHHHHHHTTTTCSSCCCCCCTTSEEEEEEEEEECCSTT
T ss_pred EEEEECCccchhhHHHhhcccccccccccccccCCCceEEEEECCCch
Confidence 688999987653 1 111 0127999999954
No 302
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.19 E-value=0.0024 Score=62.93 Aligned_cols=110 Identities=11% Similarity=-0.023 Sum_probs=63.4
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeE
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDG 387 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~ 387 (494)
..+++.+|||+|||.|..+-.|+...+...+.|+|+.-.+. .... .+. .....+...+.++....+..+.+|+
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~----~~pi-~~~--~~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH----EKPM-NVQ--SLGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC----CCCC-CCC--BTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc----cccc-ccC--cCCCCeEEEeccceehhcCCCCccE
Confidence 45688899999999999999888764434677777753210 0000 000 0001223344444333455678999
Q ss_pred EEEcCCCccccCCccchHHHHH--HHHHHHhhcccCCCcEEEE
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYR--LFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~--~fL~~l~rvLkpg~G~lvl 428 (494)
|++|.-.. .+.. . .+-++ .+|..+.++|+||.|.+++
T Consensus 144 VlsD~apn--sG~~-~-~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 144 LLCDIGES--SSSS-V-TEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp EEECCCCC--CSCH-H-HHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEecCccC--cCch-H-HHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 99996332 2221 1 11111 2377888999996466665
No 303
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.11 E-value=0.00041 Score=69.98 Aligned_cols=66 Identities=15% Similarity=0.209 Sum_probs=47.8
Q ss_pred ceeeeeeccccc-c-CCCCCeeEEEEcCCCccccCCc------cchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 367 KVSPLVCNVRQL-C-FKPACVDGIVTDLPFGKRVGSK------SNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 367 ~i~~~~~Da~~l-~-~~~~~~D~IVtNPPYG~r~~~~------~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
...++++|+.+. . +++++||+|++||||+...... .+....+..++.++.++|+|+ |.+++...+.
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~-G~i~i~~~d~ 87 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPD-GSFVVDFGGA 87 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEECCC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCC-cEEEEEECCE
Confidence 457889998763 3 5567999999999997653211 112334567788899999999 9999877653
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.06 E-value=0.00045 Score=67.35 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=45.3
Q ss_pred eeeeeccccc--cCCCCCeeEEEEcCCCccccC------CccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 369 SPLVCNVRQL--CFKPACVDGIVTDLPFGKRVG------SKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 369 ~~~~~Da~~l--~~~~~~~D~IVtNPPYG~r~~------~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
.++++|+.+. .++++++|+|++||||+.... ...+-...+..++.++.++|+|+ |.+++...+.
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~-g~i~v~~~d~ 77 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKD-GSLYIFNTPF 77 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEE-EEEEEEECHH
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCC-eEEEEEcCcH
Confidence 5788998654 245579999999999985421 11222345667788889999998 9888775543
No 305
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.01 E-value=0.00038 Score=67.91 Aligned_cols=101 Identities=14% Similarity=0.027 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCC----CCeEEEEeC--CHHHHHHHHHHHHhccCCCCcccceeeeee-ccccccCC
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYP----HTFFVCGDI--NEKLVLKTQANVLHNSGNLNRELKVSPLVC-NVRQLCFK 381 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~----~~~v~G~Di--d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~-Da~~l~~~ 381 (494)
+++|.+|+|+||+-|+-+..|+..-. ...++|+|+ .|... ... ++ ..+.+.++ |+++++
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~----Gv-~~i~~~~G~Df~~~~-- 136 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSY----GW-NIVTMKSGVDVFYKP-- 136 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CST----TG-GGEEEECSCCGGGSC--
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCC----Cc-eEEEeeccCCccCCC--
Confidence 57899999999999999998887511 124455552 22100 000 11 12344446 999864
Q ss_pred CCCeeEEEEcCCCccccCCc--cchHHHHHHHHHHHhhcccCCCc-EEEE
Q psy19 382 PACVDGIVTDLPFGKRVGSK--SNNFLLYRLFLIEIGKIVRPQIG-RAIL 428 (494)
Q Consensus 382 ~~~~D~IVtNPPYG~r~~~~--~~~~~ly~~fL~~l~rvLkpg~G-~lvl 428 (494)
...+|+|+||.--. .+.. +....++ .|.-+.++|+|| | .+++
T Consensus 137 ~~~~DvVLSDMAPn--SG~~~vD~~Rs~~--aL~~A~~~Lk~g-G~~Fvv 181 (269)
T 2px2_A 137 SEISDTLLCDIGES--SPSAEIEEQRTLR--ILEMVSDWLSRG-PKEFCI 181 (269)
T ss_dssp CCCCSEEEECCCCC--CSCHHHHHHHHHH--HHHHHHHHHTTC-CSEEEE
T ss_pred CCCCCEEEeCCCCC--CCccHHHHHHHHH--HHHHHHHHhhcC-CcEEEE
Confidence 35799999997322 2222 1122333 666677899999 7 6665
No 306
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.97 E-value=0.0015 Score=65.12 Aligned_cols=76 Identities=12% Similarity=-0.050 Sum_probs=55.6
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCe-EEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC---C-CC
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTF-FVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF---K-PA 383 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~-v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~---~-~~ 383 (494)
...+.+++|+|||.|++.+.+....-... ++++|+|+.+++..+.|... ..+..+|+.++.. + .+
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~----------~~~~~~DI~~i~~~~i~~~~ 82 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQG----------KIMYVGDVRSVTQKHIQEWG 82 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTT----------CEEEECCGGGCCHHHHHHTC
T ss_pred cCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCC----------CceeCCChHHccHHHhcccC
Confidence 34567899999999999887766521222 58999999999988888531 1356778777631 1 13
Q ss_pred CeeEEEEcCCC
Q psy19 384 CVDGIVTDLPF 394 (494)
Q Consensus 384 ~~D~IVtNPPY 394 (494)
.+|+|+.-||.
T Consensus 83 ~~Dll~ggpPC 93 (295)
T 2qrv_A 83 PFDLVIGGSPC 93 (295)
T ss_dssp CCSEEEECCCC
T ss_pred CcCEEEecCCC
Confidence 69999999996
No 307
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.96 E-value=0.0037 Score=61.98 Aligned_cols=103 Identities=10% Similarity=-0.116 Sum_probs=75.3
Q ss_pred CCEEEEEcCCcChHHHHHHhcC-----CCCeEEEEeCCH--------------------------HHHHHHHHHHHhccC
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY-----PHTFFVCGDINE--------------------------KLVLKTQANVLHNSG 360 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~-----~~~~v~G~Did~--------------------------~al~~Ar~Nl~~~g~ 360 (494)
...||++||..|.-++.+|... ++.+|+++|... ..++.+++|++.+|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 4589999999998877665432 367899999642 147789999998875
Q ss_pred CCCcccceeeeeeccccc-c-CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 361 NLNRELKVSPLVCNVRQL-C-FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 361 ~~~~~~~i~~~~~Da~~l-~-~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
. .+++.++.+|+.+. + ++.++||+|..|- +...-|...|+.+...|+|| |.+++
T Consensus 187 ~---~~~I~li~Gda~etL~~~~~~~~d~vfIDa----------D~y~~~~~~Le~~~p~L~pG-GiIv~ 242 (282)
T 2wk1_A 187 L---DEQVRFLPGWFKDTLPTAPIDTLAVLRMDG----------DLYESTWDTLTNLYPKVSVG-GYVIV 242 (282)
T ss_dssp C---STTEEEEESCHHHHSTTCCCCCEEEEEECC----------CSHHHHHHHHHHHGGGEEEE-EEEEE
T ss_pred C---cCceEEEEeCHHHHHhhCCCCCEEEEEEcC----------CccccHHHHHHHHHhhcCCC-EEEEE
Confidence 1 36789999999764 3 3346899999873 12233567788899999998 86554
No 308
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.78 E-value=0.0016 Score=65.69 Aligned_cols=64 Identities=16% Similarity=0.273 Sum_probs=46.6
Q ss_pred eeee-eeccccc--cCCCCCeeEEEEcCCCccccCC---ccchHHHHHHHHHHHhhcccCCCcEEEEEecC
Q psy19 368 VSPL-VCNVRQL--CFKPACVDGIVTDLPFGKRVGS---KSNNFLLYRLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 368 i~~~-~~Da~~l--~~~~~~~D~IVtNPPYG~r~~~---~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
..++ ++|+.+. .++++++|+|++||||+...+. ..+....+...+.++.++|+|+ |.+++....
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~-G~i~i~~~~ 108 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPT-GSIAIFGGL 108 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEE-EEEEEEECS
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCC-eEEEEEcCc
Confidence 4677 9998764 3456799999999999864211 1223345567788899999999 998887664
No 309
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.62 E-value=0.0014 Score=64.72 Aligned_cols=108 Identities=11% Similarity=-0.029 Sum_probs=63.6
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee--eccccccCCCCCe
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV--CNVRQLCFKPACV 385 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~--~Da~~l~~~~~~~ 385 (494)
.++++.+|||+|||.|..+..|+...+...++|+|+...+...+... ... ...+.... .|+.. +....+
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~------g~~ii~~~~~~dv~~--l~~~~~ 157 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL------GWNLIRFKDKTDVFN--MEVIPG 157 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT------TGGGEEEECSCCGGG--SCCCCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC------CCceEEeeCCcchhh--cCCCCc
Confidence 45788899999999999999988765545788999875421111100 000 11111222 24444 345789
Q ss_pred eEEEEcCCCccccCCccchHHHHH--HHHHHHhhcccCC-CcEEEE
Q psy19 386 DGIVTDLPFGKRVGSKSNNFLLYR--LFLIEIGKIVRPQ-IGRAIL 428 (494)
Q Consensus 386 D~IVtNPPYG~r~~~~~~~~~ly~--~fL~~l~rvLkpg-~G~lvl 428 (494)
|+|+||.-.. .|.. .. +-++ .+|.-+.++|+|| +|.+++
T Consensus 158 DvVLSDmApn--sG~~-~~-D~~rs~~LL~~A~~~Lk~g~~G~Fv~ 199 (282)
T 3gcz_A 158 DTLLCDIGES--SPSI-AV-EEQRTLRVLNCAKQWLQEGNYTEFCI 199 (282)
T ss_dssp SEEEECCCCC--CSCH-HH-HHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEecCccC--CCCh-HH-HHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 9999997443 3322 11 1111 2366778899986 276665
No 310
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.61 E-value=0.0031 Score=63.97 Aligned_cols=72 Identities=24% Similarity=0.142 Sum_probs=53.4
Q ss_pred CEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC---CCCCeeEE
Q psy19 313 DVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF---KPACVDGI 388 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~---~~~~~D~I 388 (494)
-+++|+|||.|++.+.+....- ...++++|+|+.+++..+.|.... .+.++|+.++.. +...+|++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~----------~~~~~DI~~~~~~~~~~~~~D~l 73 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPET----------NLLNRNIQQLTPQVIKKWNVDTI 73 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTS----------CEECCCGGGCCHHHHHHTTCCEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCC----------ceeccccccCCHHHhccCCCCEE
Confidence 3799999999999887765521 135789999999999999986421 355677776632 22369999
Q ss_pred EEcCCC
Q psy19 389 VTDLPF 394 (494)
Q Consensus 389 VtNPPY 394 (494)
+.-||=
T Consensus 74 ~ggpPC 79 (333)
T 4h0n_A 74 LMSPPC 79 (333)
T ss_dssp EECCCC
T ss_pred EecCCC
Confidence 999993
No 311
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.56 E-value=0.0055 Score=61.21 Aligned_cols=96 Identities=14% Similarity=0.216 Sum_probs=64.9
Q ss_pred EEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC-CCCeeEEEEcC
Q psy19 314 VFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK-PACVDGIVTDL 392 (494)
Q Consensus 314 ~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~-~~~~D~IVtNP 392 (494)
+|+|+|||.|++.+-+-... .-.++++|+|+.+++..+.|.. ..++.+|+.++... -..+|+++.-|
T Consensus 2 kvidLFsG~GG~~~G~~~aG-~~~v~a~e~d~~a~~ty~~N~~-----------~~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNHS-----------AKLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT-CEEEEEEECCTTTHHHHHHHCC-----------SEEEESCGGGCCGGGSCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHHCC-----------CCcccCChhhCCHhhCCcccEEEecC
Confidence 69999999999877554442 2356799999999999988843 14677888887421 13689999999
Q ss_pred C---C---ccccCCccchHHHHHHHHHHHhhcccCC
Q psy19 393 P---F---GKRVGSKSNNFLLYRLFLIEIGKIVRPQ 422 (494)
Q Consensus 393 P---Y---G~r~~~~~~~~~ly~~fL~~l~rvLkpg 422 (494)
| | |.+.+....-..|+..+++ +.+.++|.
T Consensus 70 PCQ~fS~ag~~~g~~d~R~~L~~~~~r-~i~~~~Pk 104 (331)
T 3ubt_Y 70 PSQSWSEGGSLRGIDDPRGKLFYEYIR-ILKQKKPI 104 (331)
T ss_dssp CGGGTEETTEECCTTCGGGHHHHHHHH-HHHHHCCS
T ss_pred CCCCcCCCCCccCCCCchhHHHHHHHH-HHhccCCe
Confidence 9 3 3333322223356666554 44456887
No 312
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.51 E-value=0.014 Score=57.86 Aligned_cols=113 Identities=13% Similarity=-0.032 Sum_probs=68.6
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee-ccccccCCCCCee
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC-NVRQLCFKPACVD 386 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~-Da~~l~~~~~~~D 386 (494)
.++++..|||+||+.|.+...++.......|+|+|+-..--+.=+ ..... +. ..+.+..+ |++.++. ..+|
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql----~w-~lV~~~~~~Dv~~l~~--~~~D 162 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSY----GW-NIVTMKSGVDVFYRPS--ECCD 162 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBT----TG-GGEEEECSCCTTSSCC--CCCS
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhc----CC-cceEEEeccCHhhCCC--CCCC
Confidence 457888999999999999998887754457999998654110000 00000 00 12556665 8887754 5699
Q ss_pred EEEEcCCCccccCCcc-chHHHHHHHHHHHhhcccCCCcEEEE--Eec
Q psy19 387 GIVTDLPFGKRVGSKS-NNFLLYRLFLIEIGKIVRPQIGRAIL--LTS 431 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~-~~~~ly~~fL~~l~rvLkpg~G~lvl--lt~ 431 (494)
+|+||.- +..+... +..... ..|+-+.++|+++.|.+++ +.|
T Consensus 163 ~ivcDig--eSs~~~~ve~~Rtl-~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 163 TLLCDIG--ESSSSAEVEEHRTI-RVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp EEEECCC--CCCSCHHHHHHHHH-HHHHHHHHHHTTCCCEEEEEESCT
T ss_pred EEEEECc--cCCCChhhhhhHHH-HHHHHHHHHhccCCCcEEEEEcCC
Confidence 9999974 3333321 111112 2566677888876455544 555
No 313
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.48 E-value=0.019 Score=55.41 Aligned_cols=114 Identities=16% Similarity=0.047 Sum_probs=70.2
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee-ccccccCCCCCee
Q psy19 308 SPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC-NVRQLCFKPACVD 386 (494)
Q Consensus 308 ~~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~-Da~~l~~~~~~~D 386 (494)
.++++.+|+|+||+.|...-.++.......|+|+|+-+.-.+.= ...+..| . ..+.|.++ |++.++. ..+|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~g----w-n~v~fk~gvDv~~~~~--~~~D 146 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYG----W-NIVKLMSGKDVFYLPP--EKCD 146 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTT----T-TSEEEECSCCGGGCCC--CCCS
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcC----c-CceEEEeccceeecCC--cccc
Confidence 45788899999999999999888775545799999865321000 0001111 1 34678888 9887754 5799
Q ss_pred EEEEcCCCccccCCcc-chHHHHHHHHHHHhhcccCCCcEEE-EEecCH
Q psy19 387 GIVTDLPFGKRVGSKS-NNFLLYRLFLIEIGKIVRPQIGRAI-LLTSDR 433 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~-~~~~ly~~fL~~l~rvLkpg~G~lv-llt~~~ 433 (494)
.|+||. |...+... +..... +.|+-+.++|+++ -.++ ++.|..
T Consensus 147 tllcDI--geSs~~~~vE~~Rtl-rvLela~~wL~~~-~fc~KVl~py~ 191 (267)
T 3p8z_A 147 TLLCDI--GESSPSPTVEESRTI-RVLKMVEPWLKNN-QFCIKVLNPYM 191 (267)
T ss_dssp EEEECC--CCCCSCHHHHHHHHH-HHHHHHGGGCSSC-EEEEEESCCCS
T ss_pred EEEEec--CCCCCChhhhhhHHH-HHHHHHHHhcccC-CEEEEEccCCC
Confidence 999996 33222211 111112 2666778889875 3222 456654
No 314
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.27 E-value=0.027 Score=58.08 Aligned_cols=112 Identities=11% Similarity=0.009 Sum_probs=66.2
Q ss_pred CCEEEEEcCCcChHHHHHHhc-----------------CCCCeEEEEeCC-----------HHHHHHHHHHHHhccCCCC
Q psy19 312 GDVFLDPMCGGGTIPVECSLS-----------------YPHTFFVCGDIN-----------EKLVLKTQANVLHNSGNLN 363 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~-----------------~~~~~v~G~Did-----------~~al~~Ar~Nl~~~g~~~~ 363 (494)
..+|+|.|||+|...+.++.. .|...|+..|+- +...+.++.. .|..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~-- 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRK-- 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCC--
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCC--
Confidence 478999999999776655443 245678888976 4444333221 1210
Q ss_pred cccceeeeeec---cccccCCCCCeeEEEEcCCCccccCCc-----------------------cchHHH--------HH
Q psy19 364 RELKVSPLVCN---VRQLCFKPACVDGIVTDLPFGKRVGSK-----------------------SNNFLL--------YR 409 (494)
Q Consensus 364 ~~~~i~~~~~D---a~~l~~~~~~~D~IVtNPPYG~r~~~~-----------------------~~~~~l--------y~ 409 (494)
...-++.+. +....++++++|+|.+|--...-.... ....+. +.
T Consensus 128 --~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~ 205 (384)
T 2efj_A 128 --IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFT 205 (384)
T ss_dssp --TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHH
T ss_pred --CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHH
Confidence 011344443 333357788999999974432111000 112223 34
Q ss_pred HHHHHHhhcccCCCcEEEEEec
Q psy19 410 LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 410 ~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.||+.-++.|+|| |++++.+.
T Consensus 206 ~FL~~Ra~eL~pG-G~mvl~~~ 226 (384)
T 2efj_A 206 TFLRIHSEELISR-GRMLLTFI 226 (384)
T ss_dssp HHHHHHHHHEEEE-EEEEEEEE
T ss_pred HHHHHHHHHhccC-CeEEEEEe
Confidence 5888889999999 99998755
No 315
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.23 E-value=0.018 Score=59.31 Aligned_cols=119 Identities=11% Similarity=-0.019 Sum_probs=66.8
Q ss_pred CCEEEEEcCCcChHHHHHHhc--------C-------CCCeEEEEeCCHHHHHHHHHHHHhccC-------CCCccccee
Q psy19 312 GDVFLDPMCGGGTIPVECSLS--------Y-------PHTFFVCGDINEKLVLKTQANVLHNSG-------NLNRELKVS 369 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~--------~-------~~~~v~G~Did~~al~~Ar~Nl~~~g~-------~~~~~~~i~ 369 (494)
..+|+|.|||+|...+.++.. + |...|+..|+-.......=+++....- ..+......
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 578999999999776655321 1 456788888765544333333332100 000000112
Q ss_pred eeee---ccccccCCCCCeeEEEEcCCCccccCCccc----------------------hHH--------HHHHHHHHHh
Q psy19 370 PLVC---NVRQLCFKPACVDGIVTDLPFGKRVGSKSN----------------------NFL--------LYRLFLIEIG 416 (494)
Q Consensus 370 ~~~~---Da~~l~~~~~~~D~IVtNPPYG~r~~~~~~----------------------~~~--------ly~~fL~~l~ 416 (494)
+..+ .+..-.++++++|+|+++--...-...... ..+ -+..||+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 332334677899999998553211100000 112 3445899999
Q ss_pred hcccCCCcEEEEEec
Q psy19 417 KIVRPQIGRAILLTS 431 (494)
Q Consensus 417 rvLkpg~G~lvllt~ 431 (494)
+.|+|| |++++.+.
T Consensus 213 ~eL~pG-G~mvl~~~ 226 (374)
T 3b5i_A 213 AEVKRG-GAMFLVCL 226 (374)
T ss_dssp HHEEEE-EEEEEEEE
T ss_pred HHhCCC-CEEEEEEe
Confidence 999999 99998654
No 316
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=95.71 E-value=0.09 Score=52.19 Aligned_cols=107 Identities=10% Similarity=-0.118 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcc-cceeeee-eccccccCCCCCee
Q psy19 309 PIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRE-LKVSPLV-CNVRQLCFKPACVD 386 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~-~~i~~~~-~Da~~l~~~~~~~D 386 (494)
..++.+|||+||+.|.++-.++...+...++|+|+...+.. ......... +.+.+.. .|+..+ ..+.+|
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-------~P~~~~~~~~~iv~~~~~~di~~l--~~~~~D 149 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-------KPIHMQTLGWNIVKFKDKSNVFTM--PTEPSD 149 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-------CCCCCCBTTGGGEEEECSCCTTTS--CCCCCS
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-------ccccccccCCceEEeecCceeeec--CCCCcC
Confidence 46889999999999999998886544457889998643200 000000000 1111211 244433 346899
Q ss_pred EEEEcCCCccccCCccchHHHH--HHHHHHHhhcccCCCcEEEE
Q psy19 387 GIVTDLPFGKRVGSKSNNFLLY--RLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 387 ~IVtNPPYG~r~~~~~~~~~ly--~~fL~~l~rvLkpg~G~lvl 428 (494)
+|++|.-.. .|.. .. +-+ -.+|.-+.++|+||.|.+++
T Consensus 150 lVlsD~APn--sG~~-~~-D~~rs~~LL~~A~~~LkpG~G~FV~ 189 (300)
T 3eld_A 150 TLLCDIGES--SSNP-LV-ERDRTMKVLENFERWKHVNTENFCV 189 (300)
T ss_dssp EEEECCCCC--CSSH-HH-HHHHHHHHHHHHHHHCCTTCCEEEE
T ss_pred EEeecCcCC--CCCH-HH-HHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 999996332 2322 11 111 12366778899996366655
No 317
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.63 E-value=0.029 Score=55.78 Aligned_cols=99 Identities=14% Similarity=0.056 Sum_probs=64.6
Q ss_pred CCCCCEEEEEcC------CcChHHHHHHhcCCC-CeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC
Q psy19 309 PIPGDVFLDPMC------GGGTIPVECSLSYPH-TFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK 381 (494)
Q Consensus 309 ~~~g~~VLDP~C------GSGtilIEAA~~~~~-~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~ 381 (494)
+..|.+|||+|| --|+..+ ....|. +.|+++|+.+-.. ..+ .++++|+..+..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~VL--r~~~p~g~~VVavDL~~~~s---------------da~--~~IqGD~~~~~~- 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAVL--RQWLPTGTLLVDSDLNDFVS---------------DAD--STLIGDCATVHT- 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHHH--HHHSCTTCEEEEEESSCCBC---------------SSS--EEEESCGGGEEE-
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHHH--HHhCCCCcEEEEeeCccccc---------------CCC--eEEEcccccccc-
Confidence 346899999997 4566422 223453 6999999987420 111 359999877644
Q ss_pred CCCeeEEEEcCCC---ccccCCccchHHHHHHHHHHHhhcccCCCcEEEE
Q psy19 382 PACVDGIVTDLPF---GKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAIL 428 (494)
Q Consensus 382 ~~~~D~IVtNPPY---G~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvl 428 (494)
.+.||+||+|+-- |..-........|....+.-+.++|+|| |.+++
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpG-GsFvV 215 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG-GSIAV 215 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCC-CEEEE
Confidence 3689999999742 2211111113346777777888899999 98877
No 318
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.11 E-value=0.029 Score=59.61 Aligned_cols=73 Identities=16% Similarity=0.170 Sum_probs=52.6
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC---------
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK--------- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~--------- 381 (494)
.-+++|+|||.|++.+.+... |. .++++|+|+.+++..+.|.... ....++.+|+.++...
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~-------p~~~~~~~DI~~i~~~~~~~~~~~~ 158 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCD-------PATHHFNEDIRDITLSHQEGVSDEA 158 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCC-------TTTCEEESCTHHHHCTTCTTSCHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccC-------CCcceeccchhhhhhccccccchhh
Confidence 458999999999998766554 43 4789999999999999886311 1123566777665311
Q ss_pred --------CCCeeEEEEcCC
Q psy19 382 --------PACVDGIVTDLP 393 (494)
Q Consensus 382 --------~~~~D~IVtNPP 393 (494)
...+|+|+.-||
T Consensus 159 ~~~~i~~~~~~~Dvl~gGpP 178 (482)
T 3me5_A 159 AAEHIRQHIPEHDVLLAGFP 178 (482)
T ss_dssp HHHHHHHHSCCCSEEEEECC
T ss_pred HHhhhhhcCCCCCEEEecCC
Confidence 136899999999
No 319
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.09 E-value=0.053 Score=55.47 Aligned_cols=132 Identities=16% Similarity=0.036 Sum_probs=78.4
Q ss_pred chHHHHHHHHHHhCC---CCCCEEEEEcCCcChHHHHHHhc----------------CCCCeEEEEeCCHHHHHHHHHHH
Q psy19 295 LKPTIAYNMVRLASP---IPGDVFLDPMCGGGTIPVECSLS----------------YPHTFFVCGDINEKLVLKTQANV 355 (494)
Q Consensus 295 L~e~lAa~ll~la~~---~~g~~VLDP~CGSGtilIEAA~~----------------~~~~~v~G~Did~~al~~Ar~Nl 355 (494)
+.+.+-.++..+... ...-+|+|.||++|...+.+... .|...|+..|+-.......-+++
T Consensus 32 ~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L 111 (359)
T 1m6e_X 32 TKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSL 111 (359)
T ss_dssp THHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTT
T ss_pred HHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhc
Confidence 344554444444332 23357999999999654433222 34567899998887777777666
Q ss_pred HhccCCCCcccceeeeeec---cccccCCCCCeeEEEEcCCCcc--ccC---------------Cc--------cchHHH
Q psy19 356 LHNSGNLNRELKVSPLVCN---VRQLCFKPACVDGIVTDLPFGK--RVG---------------SK--------SNNFLL 407 (494)
Q Consensus 356 ~~~g~~~~~~~~i~~~~~D---a~~l~~~~~~~D~IVtNPPYG~--r~~---------------~~--------~~~~~l 407 (494)
..... . ...-+..+. +....++++++|+|.+|--... +.. .. .....-
T Consensus 112 ~~~~~--~--~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D 187 (359)
T 1m6e_X 112 PIEND--V--DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQED 187 (359)
T ss_dssp TTSCS--C--TTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHH
T ss_pred chhcc--c--CCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHH
Confidence 53110 0 011244443 3334577889999998743211 100 00 112344
Q ss_pred HHHHHHHHhhcccCCCcEEEEEec
Q psy19 408 YRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 408 y~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+..||+.-++.|+|| |++++.+.
T Consensus 188 ~~~FL~~Ra~EL~pG-G~mvl~~~ 210 (359)
T 1m6e_X 188 HALFLRCRAQEVVPG-GRMVLTIL 210 (359)
T ss_dssp HHHHHHHHHHHBCTT-CEEEEEEE
T ss_pred HHHHHHHHHHHhcCC-ceEEEEEe
Confidence 667899999999999 99998654
No 320
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.85 E-value=0.15 Score=58.77 Aligned_cols=43 Identities=12% Similarity=-0.016 Sum_probs=35.1
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCC--eEEEEeCCHHHHHHHHHHHH
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHT--FFVCGDINEKLVLKTQANVL 356 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~--~v~G~Did~~al~~Ar~Nl~ 356 (494)
.-+++|+|||.|++.+-+... |. .++++|+|+.+++..+.|..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHCT
T ss_pred CCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC
Confidence 457999999999998766554 43 57899999999999988854
No 321
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.62 E-value=0.27 Score=50.93 Aligned_cols=49 Identities=6% Similarity=-0.155 Sum_probs=43.0
Q ss_pred CCCCCEEEEEcCCcChHHHHHH-hcCC-CCeEEEEeCCHHHHHHHHHHHHh
Q psy19 309 PIPGDVFLDPMCGGGTIPVECS-LSYP-HTFFVCGDINEKLVLKTQANVLH 357 (494)
Q Consensus 309 ~~~g~~VLDP~CGSGtilIEAA-~~~~-~~~v~G~Did~~al~~Ar~Nl~~ 357 (494)
.+++.+|+|.||+.|.+++.++ ...+ ..+|+++|-+|.+.+..++|+..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4688999999999999999877 4433 37999999999999999999987
No 322
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.29 E-value=0.4 Score=48.34 Aligned_cols=102 Identities=12% Similarity=0.075 Sum_probs=63.0
Q ss_pred HHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-cC
Q psy19 305 RLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-CF 380 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~~ 380 (494)
..+++++|++||-.|||. |.+++.+|+.. ++ .|+++|.+++.++.++.. |.. ..+.....|+.+ + ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~l----Ga~----~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQL----GAT----HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHH----TCS----EEEETTTSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHc----CCC----EEecCCccCHHHHHHHh
Confidence 557788999999998875 66666666543 55 699999999988888642 321 011111112111 1 11
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
..+.+|+|+-. .+.. ..+..+.+.|+++ |+++++.
T Consensus 255 ~~gg~D~vid~------~g~~--------~~~~~~~~~l~~~-G~iv~~G 289 (371)
T 1f8f_A 255 TDGGVNFALES------TGSP--------EILKQGVDALGIL-GKIAVVG 289 (371)
T ss_dssp TTSCEEEEEEC------SCCH--------HHHHHHHHTEEEE-EEEEECC
T ss_pred cCCCCcEEEEC------CCCH--------HHHHHHHHHHhcC-CEEEEeC
Confidence 12369998863 2221 2334678899998 9988763
No 323
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=92.21 E-value=0.46 Score=49.18 Aligned_cols=45 Identities=7% Similarity=-0.127 Sum_probs=34.5
Q ss_pred CEEEEEcCCcChHHHHHHhcCC-CCe----EEEEeCCHHHHHHHHHHHHh
Q psy19 313 DVFLDPMCGGGTIPVECSLSYP-HTF----FVCGDINEKLVLKTQANVLH 357 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~~-~~~----v~G~Did~~al~~Ar~Nl~~ 357 (494)
-+|+|+|||.|++...+-...- .-. +.++|+|+.|+..-+.|...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 4799999999998765544310 012 77899999999999999863
No 324
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.07 E-value=0.75 Score=46.50 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=65.0
Q ss_pred HHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--
Q psy19 303 MVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-- 378 (494)
Q Consensus 303 ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-- 378 (494)
.+..++.++|++||=.|+|. |.+++.+|+.. ++ .|+++|.++...+.++. .|. ...++....|+.+.
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa----~~vi~~~~~~~~~~i~ 244 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEE----VGA----TATVDPSAGDVVEAIA 244 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTC----SEEECTTSSCHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCC----CEEECCCCcCHHHHHH
Confidence 35677889999999988764 56666666654 55 89999999998887765 232 11111112222111
Q ss_pred c---CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 C---FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 ~---~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
. ...+.+|+|+-. .+.. ..+..+.+.|+++ |+++++.
T Consensus 245 ~~~~~~~gg~Dvvid~------~G~~--------~~~~~~~~~l~~~-G~vv~~G 284 (370)
T 4ej6_A 245 GPVGLVPGGVDVVIEC------AGVA--------ETVKQSTRLAKAG-GTVVILG 284 (370)
T ss_dssp STTSSSTTCEEEEEEC------SCCH--------HHHHHHHHHEEEE-EEEEECS
T ss_pred hhhhccCCCCCEEEEC------CCCH--------HHHHHHHHHhccC-CEEEEEe
Confidence 1 112479998863 2221 2334678899998 9988863
No 325
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.81 E-value=0.2 Score=56.10 Aligned_cols=45 Identities=18% Similarity=0.077 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--C---CCeEEEEeCCHHHHHHHHHHH
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--P---HTFFVCGDINEKLVLKTQANV 355 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~---~~~v~G~Did~~al~~Ar~Nl 355 (494)
...+|+|+|||.|++..-+.+.. . --.++++|+|+.|++.-+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 34679999999999865443321 0 025789999999999999984
No 326
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.37 E-value=0.85 Score=45.54 Aligned_cols=108 Identities=12% Similarity=0.022 Sum_probs=65.1
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 299 IAYNMVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
.|...+..+++++|++||=.|+|. |.+++.+|+.. ++ .|+++|.++..++.+++ .|. ...+.....|+.
T Consensus 154 ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa----~~vi~~~~~~~~ 224 (352)
T 3fpc_A 154 TGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALE----YGA----TDIINYKNGDIV 224 (352)
T ss_dssp HHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHH----HTC----CEEECGGGSCHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHH----hCC----ceEEcCCCcCHH
Confidence 344456778889999999887754 55566666554 55 79999999998887765 232 111111112221
Q ss_pred cc--c-CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 377 QL--C-FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 377 ~l--~-~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+. . .....+|+|+-. .+.. ..+..+.+.|+++ |+++++.
T Consensus 225 ~~v~~~t~g~g~D~v~d~------~g~~--------~~~~~~~~~l~~~-G~~v~~G 266 (352)
T 3fpc_A 225 EQILKATDGKGVDKVVIA------GGDV--------HTFAQAVKMIKPG-SDIGNVN 266 (352)
T ss_dssp HHHHHHTTTCCEEEEEEC------SSCT--------THHHHHHHHEEEE-EEEEECC
T ss_pred HHHHHHcCCCCCCEEEEC------CCCh--------HHHHHHHHHHhcC-CEEEEec
Confidence 11 1 112369998862 2221 1233577789998 9988763
No 327
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.92 E-value=0.97 Score=45.08 Aligned_cols=127 Identities=13% Similarity=0.021 Sum_probs=73.2
Q ss_pred CCCEEEEEcCCcChHHHHHHh----cCCCC--eEEEEeCCH--------HHHH-HHHHHHHhcc-CCCCcccceeeeeec
Q psy19 311 PGDVFLDPMCGGGTIPVECSL----SYPHT--FFVCGDINE--------KLVL-KTQANVLHNS-GNLNRELKVSPLVCN 374 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~----~~~~~--~v~G~Did~--------~al~-~Ar~Nl~~~g-~~~~~~~~i~~~~~D 374 (494)
+.-+|+|.|=|+|--.+.+.. ..|.. .++.+|.++ ..+. ....-+.... .. +-.-.+.+..+|
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~-~~~v~L~l~~GD 174 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYE-GERLSLKVLLGD 174 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEE-CSSEEEEEEESC
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcccc-CCcEEEEEEech
Confidence 345799999999964433322 23443 456666532 1111 1111111110 00 001134577889
Q ss_pred cccc-c-CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHhccc
Q psy19 375 VRQL-C-FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITSA 445 (494)
Q Consensus 375 a~~l-~-~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~~~~ 445 (494)
+.+. + +.+..+|+|..|+ |+-.... +++. ..+++.++++++|| |.++-.|..-. +++.+...|+
T Consensus 175 a~~~l~~l~~~~~Da~flDg-FsP~kNP--eLWs--~e~f~~l~~~~~pg-g~laTYtaag~-VRR~L~~aGF 240 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDA-FSPYKNP--ELWT--LDFLSLIKERIDEK-GYWVSYSSSLS-VRKSLLTLGF 240 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECC-SCTTTSG--GGGS--HHHHHHHHTTEEEE-EEEEESCCCHH-HHHHHHHTTC
T ss_pred HHHHHhhhcccceeEEEeCC-CCcccCc--ccCC--HHHHHHHHHHhCCC-cEEEEEeCcHH-HHHHHHHCCC
Confidence 8764 2 3445799999996 5433321 2221 24666899999999 99888777754 8888988883
No 328
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.11 E-value=1.4 Score=43.87 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=64.0
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
|+..+..+++++|++||-.|+|. |.+++.+|+.. +++|+++|.+++.++.+++ .|. + .++ .|...+
T Consensus 165 a~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa-----~--~v~-~~~~~~ 231 (348)
T 3two_A 165 TYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS----MGV-----K--HFY-TDPKQC 231 (348)
T ss_dssp HHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH----TTC-----S--EEE-SSGGGC
T ss_pred HHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh----cCC-----C--eec-CCHHHH
Confidence 34455667888999999988764 55566666554 6799999999988887754 332 1 122 232222
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
. ..+|+|+-. .+.... +..+.+.|+++ |+++++.
T Consensus 232 --~-~~~D~vid~------~g~~~~--------~~~~~~~l~~~-G~iv~~G 265 (348)
T 3two_A 232 --K-EELDFIIST------IPTHYD--------LKDYLKLLTYN-GDLALVG 265 (348)
T ss_dssp --C-SCEEEEEEC------CCSCCC--------HHHHHTTEEEE-EEEEECC
T ss_pred --h-cCCCEEEEC------CCcHHH--------HHHHHHHHhcC-CEEEEEC
Confidence 2 279998863 222211 22477799998 9988863
No 329
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.03 E-value=0.7 Score=46.74 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=61.6
Q ss_pred HHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCC
Q psy19 303 MVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFK 381 (494)
Q Consensus 303 ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~ 381 (494)
.+..++.++|++||-.|+|. |.+++.+|... ++.|+++|.+++.++.+++ .|.. ..+.....|... ...
T Consensus 186 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~----lGa~----~vi~~~~~~~~~-~~~ 255 (369)
T 1uuf_A 186 PLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA----LGAD----EVVNSRNADEMA-AHL 255 (369)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCS----EEEETTCHHHHH-TTT
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCc----EEeccccHHHHH-Hhh
Confidence 34445788999999998864 56666666554 6789999999988887764 2321 111111112111 111
Q ss_pred CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 382 PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 382 ~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
..+|+|+-.- +.... +..+.+.|+++ |+++++.
T Consensus 256 -~g~Dvvid~~------g~~~~--------~~~~~~~l~~~-G~iv~~G 288 (369)
T 1uuf_A 256 -KSFDFILNTV------AAPHN--------LDDFTTLLKRD-GTMTLVG 288 (369)
T ss_dssp -TCEEEEEECC------SSCCC--------HHHHHTTEEEE-EEEEECC
T ss_pred -cCCCEEEECC------CCHHH--------HHHHHHHhccC-CEEEEec
Confidence 4699988632 22111 22467789998 9888764
No 330
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.19 E-value=2.1 Score=46.98 Aligned_cols=128 Identities=11% Similarity=0.081 Sum_probs=77.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCC-------C-----CeEEEEeCC---HHHHHHHHHH-----------HHhccCC-CC
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYP-------H-----TFFVCGDIN---EKLVLKTQAN-----------VLHNSGN-LN 363 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~-------~-----~~v~G~Did---~~al~~Ar~N-----------l~~~g~~-~~ 363 (494)
+.-+|+|.|.|+|.-.+.+...|. . .+++.+|.. ...+..|... +...... .+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 456899999999988777666551 1 568999994 4444433211 1111000 00
Q ss_pred -----c---ccceeeeeeccccc-c-CC---CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 364 -----R---ELKVSPLVCNVRQL-C-FK---PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 364 -----~---~~~i~~~~~Da~~l-~-~~---~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ .-.+++..+|+.+. + +. ...+|.+..|+. .-... .+++ -..++..+.++++|| +.+.-.+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f-~p~~n--p~~w--~~~~~~~l~~~~~~g-~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGF-APAKN--PDMW--NEQLFNAMARMTRPG-GTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSS-CC--C--CTTC--SHHHHHHHHHHEEEE-EEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCC-CCCCC--hhhh--hHHHHHHHHHHhCCC-CEEEecc
Confidence 0 11456788898765 2 22 368999999973 21111 1111 124555799999998 8877776
Q ss_pred cCHHHHHHHHHhccc
Q psy19 431 SDRKHLIQALHITSA 445 (494)
Q Consensus 431 ~~~~~l~~~l~~~~~ 445 (494)
.... +++.+...|+
T Consensus 212 ~~~~-vr~~l~~aGf 225 (689)
T 3pvc_A 212 AAGF-VRRGLQQAGF 225 (689)
T ss_dssp CCHH-HHHHHHHTTC
T ss_pred CcHH-HHHHHHhCCe
Confidence 6654 7788887774
No 331
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.07 E-value=1.4 Score=43.44 Aligned_cols=101 Identities=10% Similarity=0.055 Sum_probs=60.5
Q ss_pred HHhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee-eccccc--c
Q psy19 305 RLASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV-CNVRQL--C 379 (494)
Q Consensus 305 ~la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~-~Da~~l--~ 379 (494)
..++.++|.+||-.|| |.|...+.++... +++|+++|.+++.++.+++ .|. ...++... .++.+. .
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~----~g~----~~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQ----IGF----DAAFNYKTVNSLEEALKK 209 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTC----SEEEETTSCSCHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCC----cEEEecCCHHHHHHHHHH
Confidence 4467889999999997 4555555555443 6799999999988777632 221 10111111 111110 0
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
...+.+|++|.+- +. ..+..+.+.|+++ |+++++.
T Consensus 210 ~~~~~~d~vi~~~------g~---------~~~~~~~~~l~~~-G~~v~~g 244 (333)
T 1v3u_A 210 ASPDGYDCYFDNV------GG---------EFLNTVLSQMKDF-GKIAICG 244 (333)
T ss_dssp HCTTCEEEEEESS------CH---------HHHHHHHTTEEEE-EEEEECC
T ss_pred HhCCCCeEEEECC------Ch---------HHHHHHHHHHhcC-CEEEEEe
Confidence 1124799998863 21 1234677899998 9988764
No 332
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=89.04 E-value=0.66 Score=54.90 Aligned_cols=44 Identities=14% Similarity=0.042 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCC--eEEEEeCCHHHHHHHHHHHH
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHT--FFVCGDINEKLVLKTQANVL 356 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~--~v~G~Did~~al~~Ar~Nl~ 356 (494)
...+++|+|||.|++.+-+... |. .++++|+++.|++.-+.|..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHCT
T ss_pred CCceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC
Confidence 3457999999999998766554 43 57899999999999998853
No 333
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=88.85 E-value=1.6 Score=43.63 Aligned_cols=103 Identities=17% Similarity=0.083 Sum_probs=63.8
Q ss_pred HHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCCe-EEEEeCCHHHHHHHHHHHHhccCCCCcccceeee-----eecc
Q psy19 303 MVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHTF-FVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL-----VCNV 375 (494)
Q Consensus 303 ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~-v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~-----~~Da 375 (494)
.+..++.++|++||=.|+|. |.+++.+|+.. ++. |+++|.+++.++.+++. . ..+ +.+. ..|+
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~-~~~-------~~~~~~~~~~~~~ 240 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-C-PEV-------VTHKVERLSAEES 240 (363)
T ss_dssp HHHHHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-C-TTC-------EEEECCSCCHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-c-hhc-------ccccccccchHHH
Confidence 34566888999999888754 66666666654 565 99999999999998875 2 110 1111 0111
Q ss_pred cc-c-c-CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 376 RQ-L-C-FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 376 ~~-l-~-~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.+ + . .....+|+|+-. .+.. ..+..+.+.|+++ |+++++.
T Consensus 241 ~~~v~~~t~g~g~Dvvid~------~g~~--------~~~~~~~~~l~~~-G~iv~~G 283 (363)
T 3m6i_A 241 AKKIVESFGGIEPAVALEC------TGVE--------SSIAAAIWAVKFG-GKVFVIG 283 (363)
T ss_dssp HHHHHHHTSSCCCSEEEEC------SCCH--------HHHHHHHHHSCTT-CEEEECC
T ss_pred HHHHHHHhCCCCCCEEEEC------CCCh--------HHHHHHHHHhcCC-CEEEEEc
Confidence 11 1 0 112468988862 2321 2334577899999 9988863
No 334
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.72 E-value=1.1 Score=44.58 Aligned_cols=106 Identities=14% Similarity=0.086 Sum_probs=63.6
Q ss_pred HHHHHHHh-----CCCCCCEEEEEcCCc-ChHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 300 AYNMVRLA-----SPIPGDVFLDPMCGG-GTIPVECSLSY-PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 300 Aa~ll~la-----~~~~g~~VLDP~CGS-GtilIEAA~~~-~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
|...+..+ ++ +|++||-.|+|. |.+++.+|+.. |+++|+++|.+++.++.+++ .|.. ..++...
T Consensus 155 a~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~ 225 (344)
T 2h6e_A 155 SMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD----YVSEMKD 225 (344)
T ss_dssp HHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS----EEECHHH
T ss_pred HHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC----EEecccc
Confidence 34445555 78 999999999863 55566666543 36789999999998887764 2321 1111111
Q ss_pred -ecc-ccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 373 -CNV-RQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 373 -~Da-~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.|. ..+. ....+|+|+-. .+.. ..+..+.+.|+++ |+++++.
T Consensus 226 ~~~~~~~~~-~g~g~D~vid~------~g~~--------~~~~~~~~~l~~~-G~iv~~g 269 (344)
T 2h6e_A 226 AESLINKLT-DGLGASIAIDL------VGTE--------ETTYNLGKLLAQE-GAIILVG 269 (344)
T ss_dssp HHHHHHHHH-TTCCEEEEEES------SCCH--------HHHHHHHHHEEEE-EEEEECC
T ss_pred chHHHHHhh-cCCCccEEEEC------CCCh--------HHHHHHHHHhhcC-CEEEEeC
Confidence 121 1111 12369999873 2221 1234577889998 9988764
No 335
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=88.04 E-value=0.75 Score=45.50 Aligned_cols=102 Identities=10% Similarity=-0.029 Sum_probs=62.2
Q ss_pred HHhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cC
Q psy19 305 RLASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CF 380 (494)
Q Consensus 305 ~la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~ 380 (494)
..++.++|++||-.|| |.|..++.+|... +++|+++|.+++.++.+.+. .|. ...+.....|+.+. ..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~---~g~----~~~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEE---LGF----DGAIDYKNEDLAAGLKRE 214 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT---TCC----SEEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---cCC----CEEEECCCHHHHHHHHHh
Confidence 5678899999999888 4566666666543 67999999999877776332 222 11111111121110 01
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
..+.+|+|+-+- +. ..+..+.+.|+++ |+++++.
T Consensus 215 ~~~~~d~vi~~~------g~---------~~~~~~~~~l~~~-G~iv~~G 248 (336)
T 4b7c_A 215 CPKGIDVFFDNV------GG---------EILDTVLTRIAFK-ARIVLCG 248 (336)
T ss_dssp CTTCEEEEEESS------CH---------HHHHHHHTTEEEE-EEEEECC
T ss_pred cCCCceEEEECC------Cc---------chHHHHHHHHhhC-CEEEEEe
Confidence 124699988743 21 1234678899998 9988763
No 336
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=88.01 E-value=1.7 Score=43.00 Aligned_cols=107 Identities=12% Similarity=0.141 Sum_probs=61.8
Q ss_pred HHHHHHhCCCCCCEEEEEcCCcCh-HHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-
Q psy19 301 YNMVRLASPIPGDVFLDPMCGGGT-IPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL- 378 (494)
Q Consensus 301 a~ll~la~~~~g~~VLDP~CGSGt-ilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l- 378 (494)
+..+..++.++|++||=.|+|++. +++..|....+.+|+++|.+++-++.++.. |. ...++....|..+.
T Consensus 153 ~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga----~~~i~~~~~~~~~~v 224 (348)
T 4eez_A 153 YKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GA----DVTINSGDVNPVDEI 224 (348)
T ss_dssp HHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TC----SEEEEC-CCCHHHHH
T ss_pred EeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CC----eEEEeCCCCCHHHHh
Confidence 344566788999999999887643 344444444468999999999877766542 21 11122222222111
Q ss_pred -c-CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 -C-FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 -~-~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
. .....+|.++.+. +.. ..+....+.|+++ |+++++.
T Consensus 225 ~~~t~g~g~d~~~~~~------~~~--------~~~~~~~~~l~~~-G~~v~~g 263 (348)
T 4eez_A 225 KKITGGLGVQSAIVCA------VAR--------IAFEQAVASLKPM-GKMVAVA 263 (348)
T ss_dssp HHHTTSSCEEEEEECC------SCH--------HHHHHHHHTEEEE-EEEEECC
T ss_pred hhhcCCCCceEEEEec------cCc--------chhheeheeecCC-ceEEEEe
Confidence 1 1123577777643 111 2233567788998 8877653
No 337
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.08 E-value=1.5 Score=43.83 Aligned_cols=106 Identities=13% Similarity=0.013 Sum_probs=61.2
Q ss_pred HHHHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee-ccccc
Q psy19 301 YNMVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC-NVRQL 378 (494)
Q Consensus 301 a~ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~-Da~~l 378 (494)
+..+..+++++|++||-.|+|. |.+++.+|+.. +++|+++|.++..++.++. .|. ...+..... |+.+
T Consensus 169 ~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~----lGa----~~v~~~~~~~~~~~- 238 (360)
T 1piw_A 169 YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK----MGA----DHYIATLEEGDWGE- 238 (360)
T ss_dssp HHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTC----SEEEEGGGTSCHHH-
T ss_pred HHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH----cCC----CEEEcCcCchHHHH-
Confidence 3444557888999999999853 55555555543 6789999999888777764 232 111111111 2111
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
... +.+|+||-.-+... .. .+..+.+.|+++ |+++++.
T Consensus 239 ~~~-~~~D~vid~~g~~~----~~--------~~~~~~~~l~~~-G~iv~~g 276 (360)
T 1piw_A 239 KYF-DTFDLIVVCASSLT----DI--------DFNIMPKAMKVG-GRIVSIS 276 (360)
T ss_dssp HSC-SCEEEEEECCSCST----TC--------CTTTGGGGEEEE-EEEEECC
T ss_pred Hhh-cCCCEEEECCCCCc----HH--------HHHHHHHHhcCC-CEEEEec
Confidence 111 47999987433200 10 111366788888 8887653
No 338
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.79 E-value=1.5 Score=39.56 Aligned_cols=101 Identities=16% Similarity=0.061 Sum_probs=58.6
Q ss_pred HhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c-C
Q psy19 306 LASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C-F 380 (494)
Q Consensus 306 la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~-~ 380 (494)
.+++++|.+||..|+ |.|...+..+... +++|+++|.+++.++.++. .|. ...+.....|..+ + . .
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~----~g~----~~~~d~~~~~~~~~~~~~~ 103 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSR----LGV----EYVGDSRSVDFADEILELT 103 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHT----TCC----SEEEETTCSTHHHHHHHHT
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCC----CEEeeCCcHHHHHHHHHHh
Confidence 457789999999884 3344444444432 6789999999987766543 232 1111111111111 1 0 1
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
....+|+||.+- | . ..+..+.+.|+++ |+++++..
T Consensus 104 ~~~~~D~vi~~~--g----~---------~~~~~~~~~l~~~-G~~v~~g~ 138 (198)
T 1pqw_A 104 DGYGVDVVLNSL--A----G---------EAIQRGVQILAPG-GRFIELGK 138 (198)
T ss_dssp TTCCEEEEEECC--C----T---------HHHHHHHHTEEEE-EEEEECSC
T ss_pred CCCCCeEEEECC--c----h---------HHHHHHHHHhccC-CEEEEEcC
Confidence 123699999764 1 1 1234677899998 99887754
No 339
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=85.54 E-value=0.96 Score=44.91 Aligned_cols=101 Identities=15% Similarity=0.127 Sum_probs=61.4
Q ss_pred HHhCCCCCCEEEEEcCC--cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--c-
Q psy19 305 RLASPIPGDVFLDPMCG--GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--C- 379 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CG--SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~- 379 (494)
..++.++|++||-.||| .|.+++.+|... +++|+++|.+++.++.+++ .|.. ..+.....|+.+. .
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lga~----~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLR----LGAA----YVIDTSTAPLYETVMEL 208 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCS----EEEETTTSCHHHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----CCCc----EEEeCCcccHHHHHHHH
Confidence 45678899999999887 566666666543 6799999999888887765 2321 1111111121110 0
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.....+|+|+-+- +.. .. ....+.|+++ |+++++.
T Consensus 209 ~~~~g~Dvvid~~------g~~----~~-----~~~~~~l~~~-G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSI------GGP----DG-----NELAFSLRPN-GHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESS------CHH----HH-----HHHHHTEEEE-EEEEECC
T ss_pred hCCCCCcEEEECC------CCh----hH-----HHHHHHhcCC-CEEEEEe
Confidence 1123799998742 211 11 1244789998 9988864
No 340
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=85.40 E-value=1.8 Score=43.05 Aligned_cols=106 Identities=15% Similarity=0.117 Sum_probs=62.8
Q ss_pred HHHHHHhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee-eecccc
Q psy19 301 YNMVRLASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL-VCNVRQ 377 (494)
Q Consensus 301 a~ll~la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~-~~Da~~ 377 (494)
...+..+++++|++||-.|+ |.|..++.++... +++|+++|.++..++.++. .|. ...+++. ..|+.+
T Consensus 159 ~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~----~g~----~~~~d~~~~~~~~~ 229 (347)
T 2hcy_A 159 YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS----IGG----EVFIDFTKEKDIVG 229 (347)
T ss_dssp HHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH----TTC----CEEEETTTCSCHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH----cCC----ceEEecCccHhHHH
Confidence 34444557789999999998 4566666666543 6799999998887766653 232 1011111 011111
Q ss_pred c--cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 378 L--CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 378 l--~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
. ....+.+|+||.+-. .. ..+..+.+.|+++ |+++++.
T Consensus 230 ~~~~~~~~~~D~vi~~~g------~~--------~~~~~~~~~l~~~-G~iv~~g 269 (347)
T 2hcy_A 230 AVLKATDGGAHGVINVSV------SE--------AAIEASTRYVRAN-GTTVLVG 269 (347)
T ss_dssp HHHHHHTSCEEEEEECSS------CH--------HHHHHHTTSEEEE-EEEEECC
T ss_pred HHHHHhCCCCCEEEECCC------cH--------HHHHHHHHHHhcC-CEEEEEe
Confidence 0 001126999988642 11 2344688899998 9988764
No 341
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=85.29 E-value=2 Score=43.23 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=60.7
Q ss_pred HHhCCC-----CCCEEEEEc-CC-cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 305 RLASPI-----PGDVFLDPM-CG-GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 305 ~la~~~-----~g~~VLDP~-CG-SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
..++.+ +|++||=.| +| .|.+++.+|+.+.+++|+++|.+++-++.+++ .|.. ..+... .|+.+
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad----~vi~~~-~~~~~ 230 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH----HVIDHS-KPLAA 230 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS----EEECTT-SCHHH
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC----EEEeCC-CCHHH
Confidence 345555 788888776 43 46677777765447899999999988888764 3321 011111 11111
Q ss_pred -c-cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 378 -L-CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 378 -l-~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
+ ....+.+|+|+-. .+. . ..+..+.+.|+++ |+++++
T Consensus 231 ~v~~~~~~g~Dvvid~------~g~----~----~~~~~~~~~l~~~-G~iv~~ 269 (363)
T 4dvj_A 231 EVAALGLGAPAFVFST------THT----D----KHAAEIADLIAPQ-GRFCLI 269 (363)
T ss_dssp HHHTTCSCCEEEEEEC------SCH----H----HHHHHHHHHSCTT-CEEEEC
T ss_pred HHHHhcCCCceEEEEC------CCc----h----hhHHHHHHHhcCC-CEEEEE
Confidence 1 1223479988762 221 1 2334677899999 998876
No 342
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=83.68 E-value=3.9 Score=40.91 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=61.9
Q ss_pred HHhCCCCCCEEEEEc--CCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cC
Q psy19 305 RLASPIPGDVFLDPM--CGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CF 380 (494)
Q Consensus 305 ~la~~~~g~~VLDP~--CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~ 380 (494)
..++.++|++||-.| .|.|..++.+|... +++|++++.+++.++.++. .|.. ..+.....|+.+. ..
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~----~~~~~~~~~~~~~~~~~ 227 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS----LGCD----RPINYKTEPVGTVLKQE 227 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCS----EEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH----cCCc----EEEecCChhHHHHHHHh
Confidence 456788999999988 34566666666654 6799999999988777764 3321 0111111121110 01
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
....+|+||-+- +. ..+..+.+.|+++ |+++++..
T Consensus 228 ~~~g~D~vid~~------g~---------~~~~~~~~~l~~~-G~iv~~g~ 262 (362)
T 2c0c_A 228 YPEGVDVVYESV------GG---------AMFDLAVDALATK-GRLIVIGF 262 (362)
T ss_dssp CTTCEEEEEECS------CT---------HHHHHHHHHEEEE-EEEEECCC
T ss_pred cCCCCCEEEECC------CH---------HHHHHHHHHHhcC-CEEEEEeC
Confidence 124699998743 21 1233577889998 99888643
No 343
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=83.51 E-value=2.5 Score=42.72 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=60.8
Q ss_pred HHHhC-CCCCCEEEEEcCCc-ChHHHHHHhcCCC-CeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee---eecccc
Q psy19 304 VRLAS-PIPGDVFLDPMCGG-GTIPVECSLSYPH-TFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL---VCNVRQ 377 (494)
Q Consensus 304 l~la~-~~~g~~VLDP~CGS-GtilIEAA~~~~~-~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~---~~Da~~ 377 (494)
+..++ .++|++||-.|+|. |.+++.+|... + .+|+++|.+++.++.+++ .|. ...+... ..|+.+
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~----lGa----~~vi~~~~~~~~~~~~ 257 (380)
T 1vj0_A 187 FDEYPESFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEE----IGA----DLTLNRRETSVEERRK 257 (380)
T ss_dssp HHTCSSCCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHH----TTC----SEEEETTTSCHHHHHH
T ss_pred HHhcCCCCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHH----cCC----cEEEeccccCcchHHH
Confidence 34557 78899999998653 55566666554 5 599999999988887763 332 1111111 112111
Q ss_pred -c-cC-CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 378 -L-CF-KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 378 -l-~~-~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ .. ....+|+|+-.- +.. ..+..+.+.|+++ |+++++.
T Consensus 258 ~v~~~~~g~g~Dvvid~~------g~~--------~~~~~~~~~l~~~-G~iv~~G 298 (380)
T 1vj0_A 258 AIMDITHGRGADFILEAT------GDS--------RALLEGSELLRRG-GFYSVAG 298 (380)
T ss_dssp HHHHHTTTSCEEEEEECS------SCT--------THHHHHHHHEEEE-EEEEECC
T ss_pred HHHHHhCCCCCcEEEECC------CCH--------HHHHHHHHHHhcC-CEEEEEe
Confidence 1 11 123699998643 211 1223567789998 9988763
No 344
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=83.13 E-value=6.3 Score=33.59 Aligned_cols=104 Identities=9% Similarity=0.007 Sum_probs=59.0
Q ss_pred EEEEEcCCcChHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc----CCCCCeeE
Q psy19 314 VFLDPMCGGGTIPVECSLS--YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC----FKPACVDG 387 (494)
Q Consensus 314 ~VLDP~CGSGtilIEAA~~--~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~----~~~~~~D~ 387 (494)
.|+=.|| |.++..+|.. -.+..++++|.|++.++.++. .|. .++.+|+.+.. ..-...|+
T Consensus 9 ~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~--------~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 9 HALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGV--------RAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTC--------EEEESCTTSHHHHHHTTGGGCSE
T ss_pred CEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCC--------CEEECCCCCHHHHHhcCcccCCE
Confidence 4554555 5555544433 236789999999998877664 232 46777775532 11236788
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHhcc
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITS 444 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~~~ 444 (494)
||.-.| ....+. ++-...+.+.|+ .+++..+.+... .+.+...|
T Consensus 75 vi~~~~------~~~~n~-----~~~~~a~~~~~~-~~iiar~~~~~~-~~~l~~~G 118 (140)
T 3fwz_A 75 LILTIP------NGYEAG-----EIVASARAKNPD-IEIIARAHYDDE-VAYITERG 118 (140)
T ss_dssp EEECCS------CHHHHH-----HHHHHHHHHCSS-SEEEEEESSHHH-HHHHHHTT
T ss_pred EEEECC------ChHHHH-----HHHHHHHHHCCC-CeEEEEECCHHH-HHHHHHCC
Confidence 887332 221111 112345566677 787777777763 34455433
No 345
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.73 E-value=8.6 Score=38.98 Aligned_cols=104 Identities=12% Similarity=0.003 Sum_probs=58.5
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--c-CCC
Q psy19 308 SPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--C-FKP 382 (494)
Q Consensus 308 ~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~-~~~ 382 (494)
++++|++||=.|+|. |.+++.+|+.. ++ .|+++|.++.-++.+++ .|.. ..++....|+.+. . ...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~~~~~~~i~~~t~g 280 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAKE----LGAD----HVIDPTKENFVEAVLDYTNG 280 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTCS----EEECTTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCCC----EEEcCCCCCHHHHHHHHhCC
Confidence 578899999888753 45555555544 56 89999999998888864 2321 1111111121110 1 112
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
..+|+|+-. .+.. ...+..++..+.+.++++ |+++++.
T Consensus 281 ~g~D~vid~------~g~~---~~~~~~~~~~l~~~~~~~-G~iv~~G 318 (404)
T 3ip1_A 281 LGAKLFLEA------TGVP---QLVWPQIEEVIWRARGIN-ATVAIVA 318 (404)
T ss_dssp CCCSEEEEC------SSCH---HHHHHHHHHHHHHCSCCC-CEEEECS
T ss_pred CCCCEEEEC------CCCc---HHHHHHHHHHHHhccCCC-cEEEEeC
Confidence 368988862 3322 112333333334555999 9988863
No 346
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.20 E-value=5.9 Score=38.99 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=60.6
Q ss_pred HHHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--
Q psy19 302 NMVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-- 378 (494)
Q Consensus 302 ~ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-- 378 (494)
.++..+...+|++||=.|+|. |.+++.+|+......++++|.+++-++.|++ .|. ...+.....|..+.
T Consensus 151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa----~~~i~~~~~~~~~~~~ 222 (346)
T 4a2c_A 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGA----MQTFNSSEMSAPQMQS 222 (346)
T ss_dssp HHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----SEEEETTTSCHHHHHH
T ss_pred HHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCC----eEEEeCCCCCHHHHHH
Confidence 345566788999999888764 3445555554433467899999998887764 332 11111111222111
Q ss_pred cC-CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 CF-KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 ~~-~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.. ....+|+|+- ..+.. ..+..+.++|+++ |+++++.
T Consensus 223 ~~~~~~g~d~v~d------~~G~~--------~~~~~~~~~l~~~-G~~v~~g 260 (346)
T 4a2c_A 223 VLRELRFNQLILE------TAGVP--------QTVELAVEIAGPH-AQLALVG 260 (346)
T ss_dssp HHGGGCSSEEEEE------CSCSH--------HHHHHHHHHCCTT-CEEEECC
T ss_pred hhcccCCcccccc------ccccc--------chhhhhhheecCC-eEEEEEe
Confidence 01 1135677665 22321 2334577889998 9888753
No 347
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=81.51 E-value=2.6 Score=42.86 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=40.4
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHH
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQ 352 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar 352 (494)
|...+..+++++|++||-.|||. |.+++.+|+.. ++ +|+++|.+++.++.++
T Consensus 174 a~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 174 GFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp HHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH
Confidence 33445667889999999999876 77777777654 56 8999999999887765
No 348
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=81.15 E-value=3.9 Score=40.34 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=65.4
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l 378 (494)
|+..+..++.++|++||-.|||. |.+++.+|+.. +++|+++|.+++.++.+++ .|. ...++....|+.+.
T Consensus 155 a~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa----~~~i~~~~~~~~~~ 225 (340)
T 3s2e_A 155 VYKGLKVTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR----LGA----EVAVNARDTDPAAW 225 (340)
T ss_dssp HHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----TTC----SEEEETTTSCHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH----cCC----CEEEeCCCcCHHHH
Confidence 44455667888999999998865 67777777654 6799999999998887754 332 11111111121110
Q ss_pred -cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 379 -CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 379 -~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
.-..+.+|+|+-+- +.. ..+..+.+.|+++ |+++++
T Consensus 226 ~~~~~g~~d~vid~~------g~~--------~~~~~~~~~l~~~-G~iv~~ 262 (340)
T 3s2e_A 226 LQKEIGGAHGVLVTA------VSP--------KAFSQAIGMVRRG-GTIALN 262 (340)
T ss_dssp HHHHHSSEEEEEESS------CCH--------HHHHHHHHHEEEE-EEEEEC
T ss_pred HHHhCCCCCEEEEeC------CCH--------HHHHHHHHHhccC-CEEEEe
Confidence 00013688887642 211 2334577889998 998876
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=80.99 E-value=4.3 Score=40.25 Aligned_cols=102 Identities=16% Similarity=0.112 Sum_probs=60.0
Q ss_pred HHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c
Q psy19 304 VRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C 379 (494)
Q Consensus 304 l~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~ 379 (494)
+..+++ +|++||-.|+|. |.+++.+|... ++ +|+++|.+++.++.++. .|.. ..+.....|+.+ + .
T Consensus 161 l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~----~Ga~----~~~~~~~~~~~~~v~~ 230 (348)
T 2d8a_A 161 VLAGPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKK----VGAD----YVINPFEEDVVKEVMD 230 (348)
T ss_dssp HTTSCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHH----HTCS----EEECTTTSCHHHHHHH
T ss_pred HHhcCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----hCCC----EEECCCCcCHHHHHHH
Confidence 344567 899999999853 55556656544 56 89999999988887763 2221 001111112111 1 0
Q ss_pred C-CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 380 F-KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 380 ~-~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
. ....+|+||-.-+ .. ..+..+.+.|+++ |+++++.
T Consensus 231 ~~~g~g~D~vid~~g------~~--------~~~~~~~~~l~~~-G~iv~~g 267 (348)
T 2d8a_A 231 ITDGNGVDVFLEFSG------AP--------KALEQGLQAVTPA-GRVSLLG 267 (348)
T ss_dssp HTTTSCEEEEEECSC------CH--------HHHHHHHHHEEEE-EEEEECC
T ss_pred HcCCCCCCEEEECCC------CH--------HHHHHHHHHHhcC-CEEEEEc
Confidence 1 1236999987432 11 2234577889998 9988764
No 350
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=80.34 E-value=3.1 Score=40.91 Aligned_cols=100 Identities=11% Similarity=0.085 Sum_probs=58.5
Q ss_pred HhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c-C
Q psy19 306 LASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C-F 380 (494)
Q Consensus 306 la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~-~ 380 (494)
.+++++|++||-.|+ |.|..++.+|... +++|++++.+++.++.+++ .|. ...++....|+.+ + . .
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga----~~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKA----LGA----WETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTC----SEEEETTTSCHHHHHHHHT
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCC----CEEEeCCCccHHHHHHHHh
Confidence 346788999998762 3455555555443 6799999999998888764 221 1011111112111 0 0 1
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+|+|+-+- +. . .+..+.+.|+++ |+++++.
T Consensus 206 ~~~g~Dvvid~~------g~-~--------~~~~~~~~l~~~-G~iv~~g 239 (325)
T 3jyn_A 206 DGKKCPVVYDGV------GQ-D--------TWLTSLDSVAPR-GLVVSFG 239 (325)
T ss_dssp TTCCEEEEEESS------CG-G--------GHHHHHTTEEEE-EEEEECC
T ss_pred CCCCceEEEECC------Ch-H--------HHHHHHHHhcCC-CEEEEEe
Confidence 124699988743 22 1 122577899998 9988874
No 351
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=79.73 E-value=3.8 Score=41.17 Aligned_cols=103 Identities=15% Similarity=0.058 Sum_probs=60.1
Q ss_pred HHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee--eeccccc--
Q psy19 305 RLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL--VCNVRQL-- 378 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~--~~Da~~l-- 378 (494)
..+++++|++||=.|+|. |.+++.+|+.. ++ +|+++|.+++.++.|++ .|. ...+... ..|+.+.
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~~----lGa----~~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAKK----FGV----NEFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHHT----TTC----CEEECGGGCSSCHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH----cCC----cEEEccccCchhHHHHHH
Confidence 456788999999988753 55555555543 55 89999999988887753 332 1111111 1111110
Q ss_pred cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 ~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+.+|+|+-. .+.. ..+..+.+.|++++|+++++.
T Consensus 258 ~~~~gg~D~vid~------~g~~--------~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFEC------IGNV--------SVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEEC------SCCH--------HHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEEC------CCCH--------HHHHHHHHHhhccCCEEEEEc
Confidence 1112479998862 3321 234467789998328877753
No 352
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=79.68 E-value=5 Score=43.76 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=77.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCC------------CCeEEEEeC---CHHHHHHHHHH-----------HHhccCC-CC
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYP------------HTFFVCGDI---NEKLVLKTQAN-----------VLHNSGN-LN 363 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~------------~~~v~G~Di---d~~al~~Ar~N-----------l~~~g~~-~~ 363 (494)
+.-+|+|.|-|+|.-.+.+...|. ..+++++|. +++.+..+... +...... .+
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 345899999999987776665551 145889998 77777644321 1111100 00
Q ss_pred c--------ccceeeeeeccccc-c-CC---CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 364 R--------ELKVSPLVCNVRQL-C-FK---PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 364 ~--------~~~i~~~~~Da~~l-~-~~---~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
. .-.+++..+|+.+. + +. ...+|+|..|+ |.-.... +++ -..++..+.++++|| |.+...+
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~np--~~w--~~~~~~~l~~~~~~g-~~~~t~~ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKNP--DMW--TQNLFNAMARLARPG-GTLATFT 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGCG--GGS--CHHHHHHHHHHEEEE-EEEEESC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCCh--hhh--hHHHHHHHHHHhCCC-CEEEecc
Confidence 0 02345667887664 2 21 35799999997 4332211 121 124556799999998 8877766
Q ss_pred cCHHHHHHHHHhccc
Q psy19 431 SDRKHLIQALHITSA 445 (494)
Q Consensus 431 ~~~~~l~~~l~~~~~ 445 (494)
... .+++.+...|.
T Consensus 220 ~~~-~vr~~L~~aGf 233 (676)
T 3ps9_A 220 SAG-FVRRGLQDAGF 233 (676)
T ss_dssp CCH-HHHHHHHHHTC
T ss_pred CcH-HHHHHHHhCCe
Confidence 664 37788877773
No 353
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=78.35 E-value=3.5 Score=41.11 Aligned_cols=101 Identities=10% Similarity=0.029 Sum_probs=59.1
Q ss_pred HHhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cC
Q psy19 305 RLASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CF 380 (494)
Q Consensus 305 ~la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~ 380 (494)
..+++++|++||-.++ |.|..++.+|... +++|+++|.+++.++.+++ .|.. ..+.....|+... ..
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~----~~~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACER----LGAK----RGINYRSEDFAAVIKAE 231 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCC----EEEeCCchHHHHHHHHH
Confidence 3467789999987742 3455555555543 6799999999998888775 2321 0111111111110 00
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+|+|+-+-. .. .+..+.+.|+++ |+++++.
T Consensus 232 ~~~g~Dvvid~~g------~~---------~~~~~~~~l~~~-G~iv~~g 265 (353)
T 4dup_A 232 TGQGVDIILDMIG------AA---------YFERNIASLAKD-GCLSIIA 265 (353)
T ss_dssp HSSCEEEEEESCC------GG---------GHHHHHHTEEEE-EEEEECC
T ss_pred hCCCceEEEECCC------HH---------HHHHHHHHhccC-CEEEEEE
Confidence 1247999987532 11 123567789998 9888764
No 354
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=77.02 E-value=6.1 Score=39.89 Aligned_cols=53 Identities=19% Similarity=0.243 Sum_probs=39.9
Q ss_pred HHHHHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHH
Q psy19 300 AYNMVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQA 353 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~ 353 (494)
|...+..+++++|++||-.|||. |.+++.+|+.. ++ .|+++|.+++.++.+++
T Consensus 174 a~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 174 GYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp HHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHH
Confidence 33344567888999999988765 66677777654 55 79999999998888864
No 355
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=76.88 E-value=4.9 Score=39.92 Aligned_cols=102 Identities=13% Similarity=0.002 Sum_probs=59.6
Q ss_pred HHhCCCCC--CEEEEEcC--CcChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c
Q psy19 305 RLASPIPG--DVFLDPMC--GGGTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L 378 (494)
Q Consensus 305 ~la~~~~g--~~VLDP~C--GSGtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l 378 (494)
..++.++| ++||-.|+ |.|...+.++... ++ +|+++|.++..++.+++. .|. ...+.....|+.+ +
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~---~g~----~~~~d~~~~~~~~~~ 223 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSE---LGF----DAAINYKKDNVAEQL 223 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT---SCC----SEEEETTTSCHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHH---cCC----ceEEecCchHHHHHH
Confidence 56788899 99999887 3444444444433 67 999999998877766542 221 1011111111111 1
Q ss_pred -cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 -CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 -~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+.+|++|-+- +. ..+..+.+.|+++ |+++++.
T Consensus 224 ~~~~~~~~d~vi~~~------G~---------~~~~~~~~~l~~~-G~iv~~G 260 (357)
T 2zb4_A 224 RESCPAGVDVYFDNV------GG---------NISDTVISQMNEN-SHIILCG 260 (357)
T ss_dssp HHHCTTCEEEEEESC------CH---------HHHHHHHHTEEEE-EEEEECC
T ss_pred HHhcCCCCCEEEECC------CH---------HHHHHHHHHhccC-cEEEEEC
Confidence 11112699998853 21 2234677899998 9988763
No 356
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=76.80 E-value=4.6 Score=39.57 Aligned_cols=100 Identities=9% Similarity=-0.015 Sum_probs=58.0
Q ss_pred HhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c-C
Q psy19 306 LASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C-F 380 (494)
Q Consensus 306 la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~-~ 380 (494)
.++++++++||-.|+ |.|...+..+... +++|+++|.+++.++.++. .|.. ..+.....|+.+ + . .
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~----~g~~----~~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALK----AGAW----QVINYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCC----EEEECCCccHHHHHHHHh
Confidence 456788999998873 3444445444432 6799999999988877765 2210 001111111110 1 0 1
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+|++|.+-. .. .+..+.+.|+++ |+++++.
T Consensus 206 ~~~~~D~vi~~~g-------~~--------~~~~~~~~l~~~-G~iv~~g 239 (327)
T 1qor_A 206 GGKKVRVVYDSVG-------RD--------TWERSLDCLQRR-GLMVSFG 239 (327)
T ss_dssp TTCCEEEEEECSC-------GG--------GHHHHHHTEEEE-EEEEECC
T ss_pred CCCCceEEEECCc-------hH--------HHHHHHHHhcCC-CEEEEEe
Confidence 1236999998642 11 123577789998 9988764
No 357
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=76.76 E-value=4.5 Score=39.76 Aligned_cols=99 Identities=10% Similarity=-0.015 Sum_probs=58.3
Q ss_pred hCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--c-CC
Q psy19 307 ASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--C-FK 381 (494)
Q Consensus 307 a~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~-~~ 381 (494)
+++++|++||-.|+ |.|..++.+|... +++|++++.+++.++.+++ .|. ...+.....|+.+. . ..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga----~~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKE----YGA----EYLINASKEDILRQVLKFTN 214 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTC----SEEEETTTSCHHHHHHHHTT
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCC----cEEEeCCCchHHHHHHHHhC
Confidence 36788999998874 3455555555543 6799999999988887754 232 10111111121110 0 11
Q ss_pred CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 382 PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 382 ~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
...+|+|+-+-. . . .+..+.+.|+++ |+++++.
T Consensus 215 ~~g~D~vid~~g------~-~--------~~~~~~~~l~~~-G~iv~~G 247 (334)
T 3qwb_A 215 GKGVDASFDSVG------K-D--------TFEISLAALKRK-GVFVSFG 247 (334)
T ss_dssp TSCEEEEEECCG------G-G--------GHHHHHHHEEEE-EEEEECC
T ss_pred CCCceEEEECCC------h-H--------HHHHHHHHhccC-CEEEEEc
Confidence 246999987532 1 1 123567789998 9988763
No 358
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=76.25 E-value=5.7 Score=39.53 Aligned_cols=103 Identities=13% Similarity=0.075 Sum_probs=62.5
Q ss_pred HHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeee---eeccc-c
Q psy19 304 VRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPL---VCNVR-Q 377 (494)
Q Consensus 304 l~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~---~~Da~-~ 377 (494)
+..+++++|++||-.|||. |.+++.+|..+ ++ .|+++|.++..++.++. .|. ...+... ..|.. .
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa----~~vi~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKE----IGA----DLVLQISKESPQEIARK 234 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHH----TTC----SEEEECSSCCHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----hCC----CEEEcCcccccchHHHH
Confidence 4556888999999998764 66666666654 56 89999999988887763 332 1111111 01111 1
Q ss_pred c-cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 378 L-CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 378 l-~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ ......+|+|+-. .+.. ..+..+.+.|+++ |+++++.
T Consensus 235 i~~~~~~g~D~vid~------~g~~--------~~~~~~~~~l~~~-G~iv~~G 273 (356)
T 1pl8_A 235 VEGQLGCKPEVTIEC------TGAE--------ASIQAGIYATRSG-GTLVLVG 273 (356)
T ss_dssp HHHHHTSCCSEEEEC------SCCH--------HHHHHHHHHSCTT-CEEEECS
T ss_pred HHHHhCCCCCEEEEC------CCCh--------HHHHHHHHHhcCC-CEEEEEe
Confidence 1 0001468998863 2221 1233577899999 9988764
No 359
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=75.73 E-value=2.4 Score=41.99 Aligned_cols=97 Identities=16% Similarity=0.137 Sum_probs=58.2
Q ss_pred HhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecc----cccc
Q psy19 306 LASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNV----RQLC 379 (494)
Q Consensus 306 la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da----~~l~ 379 (494)
.+++ +|++||-.|+|. |.+++.+|+.. ++ +|+++|.+++.++.++.- ... .+.....|+ .++.
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l--a~~-------v~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY--ADR-------LVNPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT--CSE-------EECTTTSCHHHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh--HHh-------ccCcCccCHHHHHHHhc
Confidence 5677 899999999853 55556666543 56 899999998877766542 100 011111111 1111
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
...+|+|+-.- +.. ..+..+.+.|+++ |+++++.
T Consensus 229 --~~g~D~vid~~------g~~--------~~~~~~~~~l~~~-G~iv~~g 262 (343)
T 2dq4_A 229 --GSGVEVLLEFS------GNE--------AAIHQGLMALIPG-GEARILG 262 (343)
T ss_dssp --SSCEEEEEECS------CCH--------HHHHHHHHHEEEE-EEEEECC
T ss_pred --CCCCCEEEECC------CCH--------HHHHHHHHHHhcC-CEEEEEe
Confidence 24699988632 221 2234577889998 9988764
No 360
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=74.66 E-value=8 Score=38.44 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=60.0
Q ss_pred HHHHHHhCCCCC------CEEEEEcCCc-ChHH-HHHH-hcCCCCe-EEEEeCCHH---HHHHHHHHHHhccCCCCcccc
Q psy19 301 YNMVRLASPIPG------DVFLDPMCGG-GTIP-VECS-LSYPHTF-FVCGDINEK---LVLKTQANVLHNSGNLNRELK 367 (494)
Q Consensus 301 a~ll~la~~~~g------~~VLDP~CGS-Gtil-IEAA-~~~~~~~-v~G~Did~~---al~~Ar~Nl~~~g~~~~~~~~ 367 (494)
...+..++.++| ++||-.|+|. |.++ +.+| +.. ++. |+++|.+++ .++.+++ .|. +.
T Consensus 156 ~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~----lGa-----~~ 225 (357)
T 2b5w_A 156 EKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEE----LDA-----TY 225 (357)
T ss_dssp HHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHH----TTC-----EE
T ss_pred HHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHH----cCC-----cc
Confidence 333455667788 9999999743 4555 5556 443 566 999999887 6666653 332 01
Q ss_pred eeeeeeccccc-cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 368 VSPLVCNVRQL-CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 368 i~~~~~Da~~l-~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+.....|+.++ .. .+.+|+|+-. .+.. ..+..+.+.|+++ |+++++.
T Consensus 226 v~~~~~~~~~i~~~-~gg~Dvvid~------~g~~--------~~~~~~~~~l~~~-G~iv~~g 273 (357)
T 2b5w_A 226 VDSRQTPVEDVPDV-YEQMDFIYEA------TGFP--------KHAIQSVQALAPN-GVGALLG 273 (357)
T ss_dssp EETTTSCGGGHHHH-SCCEEEEEEC------SCCH--------HHHHHHHHHEEEE-EEEEECC
T ss_pred cCCCccCHHHHHHh-CCCCCEEEEC------CCCh--------HHHHHHHHHHhcC-CEEEEEe
Confidence 11111121111 11 2378988752 2221 1234577889998 9988763
No 361
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=74.32 E-value=6.5 Score=38.98 Aligned_cols=105 Identities=15% Similarity=0.153 Sum_probs=62.9
Q ss_pred HHHHHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee-eccc-cc
Q psy19 302 NMVRLASPIPGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV-CNVR-QL 378 (494)
Q Consensus 302 ~ll~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~-~Da~-~l 378 (494)
..+..+++++|++||-.|+|. |.+++.+|+.. ++.|+++|.+++.++.++. .|. ...+.... .|.. .+
T Consensus 159 ~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa----~~~~~~~~~~~~~~~i 229 (352)
T 1e3j_A 159 HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKN----CGA----DVTLVVDPAKEEESSI 229 (352)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----TTC----SEEEECCTTTSCHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHH----hCC----CEEEcCcccccHHHHH
Confidence 334567888999999998764 55566666544 6779999999998887763 332 11111110 1111 11
Q ss_pred -c-CC---CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 379 -C-FK---PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 379 -~-~~---~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
. .. ...+|+|+-.- +.. ..+..+.+.|+++ |+++++.
T Consensus 230 ~~~~~~~~g~g~D~vid~~------g~~--------~~~~~~~~~l~~~-G~iv~~G 271 (352)
T 1e3j_A 230 IERIRSAIGDLPNVTIDCS------GNE--------KCITIGINITRTG-GTLMLVG 271 (352)
T ss_dssp HHHHHHHSSSCCSEEEECS------CCH--------HHHHHHHHHSCTT-CEEEECS
T ss_pred HHHhccccCCCCCEEEECC------CCH--------HHHHHHHHHHhcC-CEEEEEe
Confidence 0 11 13689988643 221 1233577889998 9988764
No 362
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=74.16 E-value=3.8 Score=40.09 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=27.8
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHH
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLK 350 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~ 350 (494)
..+.+|||||+|.++.... + ..++..|+|+..+..
T Consensus 36 ~~~yvEpF~GggaV~~~~~---~-~~~i~ND~n~~Lin~ 70 (284)
T 2dpm_A 36 YNRYFEPFVGGGALFFDLA---P-KDAVINDFNAELINC 70 (284)
T ss_dssp CSCEEETTCTTCHHHHHHC---C-SEEEEEESCHHHHHH
T ss_pred cCEEEeecCCccHHHHhhh---c-cceeeeecchHHHHH
Confidence 4689999999999987652 2 478899999987644
No 363
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=72.68 E-value=37 Score=33.77 Aligned_cols=48 Identities=15% Similarity=0.107 Sum_probs=36.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhc
Q psy19 310 IPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHN 358 (494)
Q Consensus 310 ~~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~ 358 (494)
.+...|+.+|||..|.........++..++-+|. |..++.-++-+...
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~ 143 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRES 143 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHS
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhc
Confidence 3557899999999999988776555677777777 88888777776654
No 364
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=72.63 E-value=6.5 Score=39.34 Aligned_cols=105 Identities=13% Similarity=0.178 Sum_probs=58.2
Q ss_pred HHHHHHHhCCC-CCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec-cc
Q psy19 300 AYNMVRLASPI-PGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN-VR 376 (494)
Q Consensus 300 Aa~ll~la~~~-~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D-a~ 376 (494)
|+..+..++.. +|++||=.|+|. |.+++.+|... +++|++++.++..++.+++. .|. ...+.....+ +.
T Consensus 175 a~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~---lGa----~~v~~~~~~~~~~ 246 (366)
T 1yqd_A 175 VYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKN---FGA----DSFLVSRDQEQMQ 246 (366)
T ss_dssp HHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHT---SCC----SEEEETTCHHHHH
T ss_pred HHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh---cCC----ceEEeccCHHHHH
Confidence 44455556777 899998887642 34444444443 67999999998776665532 232 1011111111 11
Q ss_pred cccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 377 QLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 377 ~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ .. +.+|+|+-.-+ ....+ ..+.+.|+++ |+++.+.
T Consensus 247 ~--~~-~~~D~vid~~g------~~~~~--------~~~~~~l~~~-G~iv~~g 282 (366)
T 1yqd_A 247 A--AA-GTLDGIIDTVS------AVHPL--------LPLFGLLKSH-GKLILVG 282 (366)
T ss_dssp H--TT-TCEEEEEECCS------SCCCS--------HHHHHHEEEE-EEEEECC
T ss_pred H--hh-CCCCEEEECCC------cHHHH--------HHHHHHHhcC-CEEEEEc
Confidence 1 11 36999987532 11111 1355678888 8887764
No 365
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=72.59 E-value=8 Score=38.26 Aligned_cols=101 Identities=11% Similarity=0.125 Sum_probs=58.1
Q ss_pred HHhCCC------CCCEEEEEc-CC-cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 305 RLASPI------PGDVFLDPM-CG-GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 305 ~la~~~------~g~~VLDP~-CG-SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
..++.+ +|++||=.+ +| .|.+++.+|.. .+++|++++.+++.++.+++ .|.. ..+... .|+.
T Consensus 138 ~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~-~Ga~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~-~~~~ 207 (346)
T 3fbg_A 138 DVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKA-YGLRVITTASRNETIEWTKK----MGAD----IVLNHK-ESLL 207 (346)
T ss_dssp TTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHH-TTCEEEEECCSHHHHHHHHH----HTCS----EEECTT-SCHH
T ss_pred HhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHh----cCCc----EEEECC-ccHH
Confidence 345666 788888773 33 34455555554 36799999999998888876 2321 001111 1111
Q ss_pred c-c-cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 377 Q-L-CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 377 ~-l-~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ + ......+|+|+-. .+. . ..+..+.+.|+++ |+++.+.
T Consensus 208 ~~~~~~~~~g~Dvv~d~------~g~----~----~~~~~~~~~l~~~-G~iv~~~ 248 (346)
T 3fbg_A 208 NQFKTQGIELVDYVFCT------FNT----D----MYYDDMIQLVKPR-GHIATIV 248 (346)
T ss_dssp HHHHHHTCCCEEEEEES------SCH----H----HHHHHHHHHEEEE-EEEEESS
T ss_pred HHHHHhCCCCccEEEEC------CCc----h----HHHHHHHHHhccC-CEEEEEC
Confidence 1 1 1122469988863 221 1 2334677899998 9987653
No 366
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=71.30 E-value=60 Score=32.59 Aligned_cols=102 Identities=16% Similarity=-0.001 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVT 390 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IVt 390 (494)
.+..||.+..+-|.+...++.. .++.+.=+--+-..++.|+..+++.. ..+.+ .+..+ .+ ...+|+|+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~~~~---~~~~~--~~~~~-~~-~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNGIDE---SSVKF--LDSTA-DY-PQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTTCCG---GGSEE--EETTS-CC-CSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcCCCc---cceEe--ccccc-cc-ccCCCEEEE
Confidence 4567999999999988766543 23334226777788999999987631 12222 22222 12 257999999
Q ss_pred cCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCH
Q psy19 391 DLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDR 433 (494)
Q Consensus 391 NPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~ 433 (494)
-.|-. . ......|..+...|.+| +++++...+.
T Consensus 107 ~lpk~--------~-~~l~~~L~~l~~~l~~~-~~i~~~g~~~ 139 (375)
T 4dcm_A 107 KVPKT--------L-ALLEQQLRALRKVVTSD-TRIIAGAKAR 139 (375)
T ss_dssp ECCSC--------H-HHHHHHHHHHHTTCCTT-SEEEEEEEGG
T ss_pred EcCCC--------H-HHHHHHHHHHHhhCCCC-CEEEEEeccc
Confidence 77721 1 22345566788899998 8886665543
No 367
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=71.03 E-value=13 Score=37.10 Aligned_cols=98 Identities=11% Similarity=-0.091 Sum_probs=56.0
Q ss_pred HhCCC--C-------CCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCH---HHHHHHHHHHHhccCCCCcccceeeee
Q psy19 306 LASPI--P-------GDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINE---KLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 306 la~~~--~-------g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~---~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.++.+ + |++||-.|+|. |.+++.+|... +++|+++|.++ +.++.++. .|. +.++ ..
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~----~ga-----~~v~-~~ 234 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEE----TKT-----NYYN-SS 234 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHH----HTC-----EEEE-CT
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHH----hCC-----ceec-hH
Confidence 56677 7 99999998732 33444444433 57999999987 66666653 232 1111 00
Q ss_pred ecccc-ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHH-HHHhhcccCCCcEEEEEe
Q psy19 373 CNVRQ-LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFL-IEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 373 ~Da~~-l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL-~~l~rvLkpg~G~lvllt 430 (494)
|+.+ +.-....+|+||-+-. ... .+ +.+.+.|+++ |+++++.
T Consensus 235 -~~~~~~~~~~~~~d~vid~~g------~~~--------~~~~~~~~~l~~~-G~iv~~g 278 (366)
T 2cdc_A 235 -NGYDKLKDSVGKFDVIIDATG------ADV--------NILGNVIPLLGRN-GVLGLFG 278 (366)
T ss_dssp -TCSHHHHHHHCCEEEEEECCC------CCT--------HHHHHHGGGEEEE-EEEEECS
T ss_pred -HHHHHHHHhCCCCCEEEECCC------ChH--------HHHHHHHHHHhcC-CEEEEEe
Confidence 1110 0000146999987532 211 22 4678899998 9888763
No 368
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=70.86 E-value=7.1 Score=38.16 Aligned_cols=98 Identities=9% Similarity=-0.015 Sum_probs=55.7
Q ss_pred hCCCCCC-EEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-cCCC
Q psy19 307 ASPIPGD-VFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-CFKP 382 (494)
Q Consensus 307 a~~~~g~-~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~~~~ 382 (494)
++.++++ +||-.|+ |.|.+++.+|... ++++++++.+++.++.++. .|. ...++....|...+ ....
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa----~~~i~~~~~~~~~~~~~~~ 214 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV----LGA----KEVLAREDVMAERIRPLDK 214 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH----TTC----SEEEECC---------CCS
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----cCC----cEEEecCCcHHHHHHHhcC
Confidence 4667775 7888886 4566666666554 6789999998877777653 332 11111111110101 1122
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
..+|+|+-.- +.. . + ..+.+.|+++ |+++++
T Consensus 215 ~~~d~vid~~------g~~-~----~----~~~~~~l~~~-G~~v~~ 245 (328)
T 1xa0_A 215 QRWAAAVDPV------GGR-T----L----ATVLSRMRYG-GAVAVS 245 (328)
T ss_dssp CCEEEEEECS------TTT-T----H----HHHHHTEEEE-EEEEEC
T ss_pred CcccEEEECC------cHH-H----H----HHHHHhhccC-CEEEEE
Confidence 4689887642 221 1 2 2467789998 998876
No 369
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=70.58 E-value=5.2 Score=39.87 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=57.1
Q ss_pred HHHHHHhCCC-CCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec-ccc
Q psy19 301 YNMVRLASPI-PGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN-VRQ 377 (494)
Q Consensus 301 a~ll~la~~~-~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D-a~~ 377 (494)
+..+..++.. +|++||=.|+|. |.+++.+|+.. +++|+++|.+++.++.+++ ..|.. ..+.....+ +.+
T Consensus 169 ~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~---~lGa~----~vi~~~~~~~~~~ 240 (357)
T 2cf5_A 169 YSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQ---DLGAD----DYVIGSDQAKMSE 240 (357)
T ss_dssp HHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHT---TSCCS----CEEETTCHHHHHH
T ss_pred HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHH---HcCCc----eeeccccHHHHHH
Confidence 3344556777 899999887642 33444444433 5789999998876666552 23321 111111111 111
Q ss_pred ccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 378 LCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 378 l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.. +.+|+|+-.- +.... +..+.+.|+++ |+++++.
T Consensus 241 --~~-~g~D~vid~~------g~~~~--------~~~~~~~l~~~-G~iv~~G 275 (357)
T 2cf5_A 241 --LA-DSLDYVIDTV------PVHHA--------LEPYLSLLKLD-GKLILMG 275 (357)
T ss_dssp --ST-TTEEEEEECC------CSCCC--------SHHHHTTEEEE-EEEEECS
T ss_pred --hc-CCCCEEEECC------CChHH--------HHHHHHHhccC-CEEEEeC
Confidence 11 3689888632 21111 11356788898 9887763
No 370
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=69.72 E-value=9.9 Score=37.51 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=64.7
Q ss_pred HHHHHHHhCCCCCCEEEEEcCC--cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc
Q psy19 300 AYNMVRLASPIPGDVFLDPMCG--GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ 377 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CG--SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~ 377 (494)
|...+..++++++++||-.|+| .|..++.++....+++|+++|.++..++.++. .|.. ..+.....|..+
T Consensus 159 a~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~~----~~~~~~~~~~~~ 230 (347)
T 1jvb_A 159 TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGAD----YVINASMQDPLA 230 (347)
T ss_dssp HHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHH
T ss_pred HHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCC----EEecCCCccHHH
Confidence 4455566788899999999987 44455555554326789999999988887753 2321 011111111100
Q ss_pred -c-cCCC-CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 378 -L-CFKP-ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 378 -l-~~~~-~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ .... +.+|+||-+- +.. ..+..+.+.|+++ |+++++.
T Consensus 231 ~~~~~~~~~~~d~vi~~~------g~~--------~~~~~~~~~l~~~-G~iv~~g 271 (347)
T 1jvb_A 231 EIRRITESKGVDAVIDLN------NSE--------KTLSVYPKALAKQ-GKYVMVG 271 (347)
T ss_dssp HHHHHTTTSCEEEEEESC------CCH--------HHHTTGGGGEEEE-EEEEECC
T ss_pred HHHHHhcCCCceEEEECC------CCH--------HHHHHHHHHHhcC-CEEEEEC
Confidence 1 1111 4799998753 211 2334578899998 9988763
No 371
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=69.29 E-value=27 Score=33.80 Aligned_cols=109 Identities=7% Similarity=0.017 Sum_probs=65.7
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.|.++|=-|.++| |+.+.|..+ .++.|+..|.+.+.++.+.+.+ + ..+..+++|+.+..-
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g------~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G------GGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C------TTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C------CCeEEEEecCCCHHHHHHHHHHH
Confidence 5677887776655 655555432 3789999999999887765544 2 123466777765410
Q ss_pred --CCCCeeEEEEcCCCccccCCc----cc--------hHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 381 --KPACVDGIVTDLPFGKRVGSK----SN--------NFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 --~~~~~D~IVtNPPYG~r~~~~----~~--------~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.-+.+|++|.|--.+...... ++ +...| .+.+.+...++.+ |+++.+++
T Consensus 98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~-~~~~~~~p~m~~~-G~IInisS 160 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVL-FTVQKALPLLARG-SSVVLTGS 160 (273)
T ss_dssp HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHH-HHHHHHTTTEEEE-EEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHH-HHHHHHHHHHhhC-CeEEEEee
Confidence 115799999996443221111 11 11111 2445677778887 88887765
No 372
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=69.25 E-value=13 Score=36.29 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=59.3
Q ss_pred HHHHHHHHhCCCCCCEEEEEc-CC-cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeec-c
Q psy19 299 IAYNMVRLASPIPGDVFLDPM-CG-GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCN-V 375 (494)
Q Consensus 299 lAa~ll~la~~~~g~~VLDP~-CG-SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~D-a 375 (494)
.|+..+..+++++|++||=.+ +| .|.+++.+|+.. ++++++++. +...+.+++ .|. ...++....| +
T Consensus 140 ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~-~~~~~~~~~----lGa----~~~i~~~~~~~~ 209 (321)
T 3tqh_A 140 TALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTAS-KRNHAFLKA----LGA----EQCINYHEEDFL 209 (321)
T ss_dssp HHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEEC-HHHHHHHHH----HTC----SEEEETTTSCHH
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEec-cchHHHHHH----cCC----CEEEeCCCcchh
Confidence 344455677889999998764 33 455566666554 678999874 443555543 342 1111111112 1
Q ss_pred ccccCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 376 RQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 376 ~~l~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.+. . ..+|+|+-. .+. . . +..+.+.|+++ |+++.+..
T Consensus 210 ~~~-~--~g~D~v~d~------~g~----~----~-~~~~~~~l~~~-G~iv~~g~ 246 (321)
T 3tqh_A 210 LAI-S--TPVDAVIDL------VGG----D----V-GIQSIDCLKET-GCIVSVPT 246 (321)
T ss_dssp HHC-C--SCEEEEEES------SCH----H----H-HHHHGGGEEEE-EEEEECCS
T ss_pred hhh-c--cCCCEEEEC------CCc----H----H-HHHHHHhccCC-CEEEEeCC
Confidence 111 1 468988762 221 1 1 14688899998 99887743
No 373
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=69.05 E-value=4.9 Score=39.17 Aligned_cols=33 Identities=24% Similarity=0.686 Sum_probs=26.6
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHH
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLV 348 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al 348 (494)
..+.+|||||+|.++.... ...++..|+|+..+
T Consensus 28 ~~~yvEpF~Ggg~V~~~~~----~~~~i~ND~n~~li 60 (278)
T 2g1p_A 28 GECLVEPFVGAGSVFLNTD----FSRYILADINSDLI 60 (278)
T ss_dssp CSEEEETTCTTCHHHHTCC----CSEEEEEESCHHHH
T ss_pred cCeEEeeccCccHHHHhhc----ccceEEEeccHHHH
Confidence 5799999999998876432 24788899999876
No 374
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=68.12 E-value=8.3 Score=37.69 Aligned_cols=99 Identities=16% Similarity=0.030 Sum_probs=56.5
Q ss_pred hCCCCCC-EEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc-cCCC
Q psy19 307 ASPIPGD-VFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL-CFKP 382 (494)
Q Consensus 307 a~~~~g~-~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l-~~~~ 382 (494)
++.++++ +||=.|| |.|.+++.+|... ++++++++.+++.++.+++ .|.. ..++....|...+ ....
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~----~v~~~~~~~~~~~~~~~~ 215 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ----LGAS----EVISREDVYDGTLKALSK 215 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH----HTCS----EEEEHHHHCSSCCCSSCC
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCc----EEEECCCchHHHHHHhhc
Confidence 4567775 7888886 4455566655543 5789999998777776654 2321 1111111111111 1122
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
..+|+|+-. .+. . .+..+.+.|+++ |+++++.
T Consensus 216 ~~~d~vid~------~g~-----~----~~~~~~~~l~~~-G~iv~~G 247 (330)
T 1tt7_A 216 QQWQGAVDP------VGG-----K----QLASLLSKIQYG-GSVAVSG 247 (330)
T ss_dssp CCEEEEEES------CCT-----H----HHHHHHTTEEEE-EEEEECC
T ss_pred CCccEEEEC------CcH-----H----HHHHHHHhhcCC-CEEEEEe
Confidence 468988763 222 1 133577899998 9988763
No 375
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=67.91 E-value=7.8 Score=38.20 Aligned_cols=99 Identities=11% Similarity=0.141 Sum_probs=60.9
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-cC-CCC
Q psy19 308 SPIPGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-CF-KPA 383 (494)
Q Consensus 308 ~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~~-~~~ 383 (494)
..++|++||=.|+|. |.+++.+|+...+.+|+++|.+++-++.+++ .|. ...+... .|..+ + .. ...
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa----~~~i~~~-~~~~~~v~~~t~g~ 238 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGA----DAAVKSG-AGAADAIRELTGGQ 238 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTC----SEEEECS-TTHHHHHHHHHGGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC----CEEEcCC-CcHHHHHHHHhCCC
Confidence 678999999998764 6666666665446799999999998887764 332 1111111 11111 0 01 113
Q ss_pred CeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 384 CVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 384 ~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.+|+|+-. .+.. ..+..+.+.|+++ |+++++.
T Consensus 239 g~d~v~d~------~G~~--------~~~~~~~~~l~~~-G~iv~~G 270 (345)
T 3jv7_A 239 GATAVFDF------VGAQ--------STIDTAQQVVAVD-GHISVVG 270 (345)
T ss_dssp CEEEEEES------SCCH--------HHHHHHHHHEEEE-EEEEECS
T ss_pred CCeEEEEC------CCCH--------HHHHHHHHHHhcC-CEEEEEC
Confidence 68988762 3321 2344678899998 9988764
No 376
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=65.96 E-value=43 Score=31.26 Aligned_cols=110 Identities=10% Similarity=0.058 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.+.++|=.|+ +|.|+.+.|..+ .+++|+..|.++..++.....+. ..+.++.+|+.+..-
T Consensus 7 ~gk~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 7 QGKKAIVIGG-THGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---------PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CcceEEEccCCCHHHHHHHHHHH
Confidence 4566776665 455666555432 36899999999988776655442 234677788766420
Q ss_pred --CCCCeeEEEEcCCCccccC----CccchHHHHH-------HHHHHHhhcccCCCcEEEEEec
Q psy19 381 --KPACVDGIVTDLPFGKRVG----SKSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 --~~~~~D~IVtNPPYG~r~~----~~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.-+.+|++|.|--+..... ..++....+. .+.+.+...++.+ |+++.+++
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS 139 (255)
T 4eso_A 77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSS 139 (255)
T ss_dssp HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECC
Confidence 0147999999975432111 1111111111 2445566677777 88888765
No 377
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=65.50 E-value=12 Score=37.18 Aligned_cols=101 Identities=14% Similarity=0.094 Sum_probs=60.2
Q ss_pred HHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c-C
Q psy19 305 RLASPIPGDVFLDPMCGG-GTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C-F 380 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~-~ 380 (494)
..+++++|++||=.|||. |.+++.+|... +++++++|.++..++.+++ .|.. ..++....|+.+ + . .
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA----LGAD----HGINRLEEDWVERVYALT 253 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH----cCCC----EEEcCCcccHHHHHHHHh
Confidence 346778999999998664 55555556543 6799999999988887754 2321 111100011111 0 0 1
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+|+|+-.-. . .. +..+.+.|+++ |+++++.
T Consensus 254 ~g~g~D~vid~~g------~-~~--------~~~~~~~l~~~-G~iv~~G 287 (363)
T 3uog_A 254 GDRGADHILEIAG------G-AG--------LGQSLKAVAPD-GRISVIG 287 (363)
T ss_dssp TTCCEEEEEEETT------S-SC--------HHHHHHHEEEE-EEEEEEC
T ss_pred CCCCceEEEECCC------h-HH--------HHHHHHHhhcC-CEEEEEe
Confidence 1237999887432 1 11 22466789998 9988774
No 378
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=65.39 E-value=26 Score=33.69 Aligned_cols=77 Identities=10% Similarity=0.050 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCC------------HHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDIN------------EKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did------------~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
.+.++|=.|+++ .|+.+.|..+ .++.|+.+|.+ +..++.+...+...+ ..+.++.+|+.
T Consensus 27 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~ 99 (299)
T 3t7c_A 27 EGKVAFITGAAR-GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG------RRIIASQVDVR 99 (299)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT------CCEEEEECCTT
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC------CceEEEECCCC
Confidence 456777777654 4655554432 37889999987 677776666666443 24567888887
Q ss_pred cccC----------CCCCeeEEEEcCCC
Q psy19 377 QLCF----------KPACVDGIVTDLPF 394 (494)
Q Consensus 377 ~l~~----------~~~~~D~IVtNPPY 394 (494)
+..- .-+.+|++|.|--+
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 6420 01478999998654
No 379
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=64.35 E-value=15 Score=35.55 Aligned_cols=96 Identities=14% Similarity=0.006 Sum_probs=56.0
Q ss_pred CCCC--CCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCC
Q psy19 308 SPIP--GDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPA 383 (494)
Q Consensus 308 ~~~~--g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~ 383 (494)
+.++ +. ||=.++ |.|.+++.+|+.. +++|++++.+++-++.+++ .|.. ..++....+. -.....+
T Consensus 142 ~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~~~~-~~~~~~~ 210 (324)
T 3nx4_A 142 GIRPQDGE-VVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKS----LGAN----RILSRDEFAE-SRPLEKQ 210 (324)
T ss_dssp TCCGGGCC-EEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHH----HTCS----EEEEGGGSSC-CCSSCCC
T ss_pred ccCCCCCe-EEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCC----EEEecCCHHH-HHhhcCC
Confidence 3444 45 776665 4566667766654 6799999999988888765 3321 1111111111 0012235
Q ss_pred CeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 384 CVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 384 ~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.+|+|+-. .+. . .+..+.+.|+++ |+++++.
T Consensus 211 ~~d~v~d~------~g~-----~----~~~~~~~~l~~~-G~iv~~G 241 (324)
T 3nx4_A 211 LWAGAIDT------VGD-----K----VLAKVLAQMNYG-GCVAACG 241 (324)
T ss_dssp CEEEEEES------SCH-----H----HHHHHHHTEEEE-EEEEECC
T ss_pred CccEEEEC------CCc-----H----HHHHHHHHHhcC-CEEEEEe
Confidence 78987652 221 1 344678899998 9988763
No 380
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=64.24 E-value=56 Score=31.08 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc---------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC--------- 379 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~--------- 379 (494)
.|.++|=-|++ +.|+.+.|..+ .+++|+..|++++.++.+...+...|. ++..+++|+.+..
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~------~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY------DAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC------CEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC------cEEEEEeeCCCHHHHHHHHHHH
Confidence 45566666654 55665555442 378999999999999888887776542 3456777776531
Q ss_pred -CCCCCeeEEEEcCCC
Q psy19 380 -FKPACVDGIVTDLPF 394 (494)
Q Consensus 380 -~~~~~~D~IVtNPPY 394 (494)
-.-+..|++|.|--.
T Consensus 81 ~~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 81 DAEGIHVDILINNAGI 96 (255)
T ss_dssp HHTTCCCCEEEECCCC
T ss_pred HHHCCCCcEEEECCCC
Confidence 012679999999654
No 381
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=63.94 E-value=19 Score=35.36 Aligned_cols=106 Identities=19% Similarity=0.206 Sum_probs=62.7
Q ss_pred HHHHHHHhCCCCCCEEEEEcCC-cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-
Q psy19 300 AYNMVRLASPIPGDVFLDPMCG-GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ- 377 (494)
Q Consensus 300 Aa~ll~la~~~~g~~VLDP~CG-SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~- 377 (494)
|...+..+++++|++||-.|+| .|.+++.+|... +++|+++|.++..++.++. .|.. ..++....|+.+
T Consensus 153 a~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~----~~~d~~~~~~~~~ 223 (339)
T 1rjw_A 153 TYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE----LGAD----LVVNPLKEDAAKF 223 (339)
T ss_dssp HHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----TTCS----EEECTTTSCHHHH
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----CCCC----EEecCCCccHHHH
Confidence 3444555678899999999985 355555555543 6799999999998887753 3321 011111111110
Q ss_pred c-cCCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 378 L-CFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 378 l-~~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
+ ... +.+|+||-+- +.. ..+..+.+.|+++ |+++++.
T Consensus 224 ~~~~~-~~~d~vid~~------g~~--------~~~~~~~~~l~~~-G~~v~~g 261 (339)
T 1rjw_A 224 MKEKV-GGVHAAVVTA------VSK--------PAFQSAYNSIRRG-GACVLVG 261 (339)
T ss_dssp HHHHH-SSEEEEEESS------CCH--------HHHHHHHHHEEEE-EEEEECC
T ss_pred HHHHh-CCCCEEEECC------CCH--------HHHHHHHHHhhcC-CEEEEec
Confidence 0 001 3689988743 221 1234577788998 9887763
No 382
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=63.83 E-value=33 Score=32.16 Aligned_cols=79 Identities=9% Similarity=0.010 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCcC-hHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-------
Q psy19 311 PGDVFLDPMCGGG-TIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSG-tilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~------- 380 (494)
.|.++|=-|++++ .|+.+.|..+ .+++|+..|.+++.++.+.+-++..+- ..+.++++|+.+..-
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-----PEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-----SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CcEEEEEccCCCHHHHHHHHHH
Confidence 4667787776542 4555544332 378999999999888887777765431 234677788765310
Q ss_pred ---CCCCeeEEEEcCCC
Q psy19 381 ---KPACVDGIVTDLPF 394 (494)
Q Consensus 381 ---~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|--+
T Consensus 80 ~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp HHHHHCCCSEEEECCCC
T ss_pred HHHHhCCCCEEEecccc
Confidence 11579999999654
No 383
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=63.34 E-value=4.3 Score=39.13 Aligned_cols=34 Identities=24% Similarity=0.523 Sum_probs=26.4
Q ss_pred CCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHH
Q psy19 312 GDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLK 350 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~ 350 (494)
..+.+|||||+|.+.... . + . ++..|+|+..+..
T Consensus 25 ~~~yvEpF~GggaV~~~~--~-~-~-~viNDin~~li~~ 58 (259)
T 1yf3_A 25 YNRFVDLFCGGLSVSLNV--N-G-P-VLANDIQEPIIEM 58 (259)
T ss_dssp CSEEEETTCTTCTTGGGS--C-S-S-EEEECSCHHHHHH
T ss_pred cCeEEEecCCccHHHHhc--c-c-c-EEEecCChHHHHH
Confidence 579999999999987753 2 2 3 8888999877654
No 384
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=62.72 E-value=1.1e+02 Score=29.27 Aligned_cols=103 Identities=13% Similarity=-0.015 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCcChHHHHHHhc-------CCCCeEEEEeC-----CH----------------------HHHHHHH---H
Q psy19 311 PGDVFLDPMCGGGTIPVECSLS-------YPHTFFVCGDI-----NE----------------------KLVLKTQ---A 353 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~-------~~~~~v~G~Di-----d~----------------------~al~~Ar---~ 353 (494)
+| .|++.||-.|.-++.+|.. .+..+++|.|. .+ ..++... .
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 44 7999999999887775542 34578999982 11 1122111 1
Q ss_pred HHHhccCCCCcccceeeeeeccccc-c-----CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEE
Q psy19 354 NVLHNSGNLNRELKVSPLVCNVRQL-C-----FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAI 427 (494)
Q Consensus 354 Nl~~~g~~~~~~~~i~~~~~Da~~l-~-----~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lv 427 (494)
|.+..+. ...++.++.+++.+. | .+...+|+|..|-- ...-+...++.+...|+|| |.++
T Consensus 149 ~~~~~g~---~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D----------~Y~~t~~~le~~~p~l~~G-GvIv 214 (257)
T 3tos_A 149 CSDFFGH---VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD----------LYEPTKAVLEAIRPYLTKG-SIVA 214 (257)
T ss_dssp TTSTTTT---SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC----------CHHHHHHHHHHHGGGEEEE-EEEE
T ss_pred hhhhcCC---CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc----------ccchHHHHHHHHHHHhCCC-cEEE
Confidence 2122221 246789999998764 2 23347999988741 1222445566788899998 8665
Q ss_pred E
Q psy19 428 L 428 (494)
Q Consensus 428 l 428 (494)
+
T Consensus 215 ~ 215 (257)
T 3tos_A 215 F 215 (257)
T ss_dssp E
T ss_pred E
Confidence 5
No 385
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=62.23 E-value=28 Score=35.52 Aligned_cols=45 Identities=18% Similarity=0.059 Sum_probs=32.9
Q ss_pred CCEEEEEcCCcChHHHHHHhc---C----CCCeEEEEeCCHHHHHHHHHHHH
Q psy19 312 GDVFLDPMCGGGTIPVECSLS---Y----PHTFFVCGDINEKLVLKTQANVL 356 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~---~----~~~~v~G~Did~~al~~Ar~Nl~ 356 (494)
.-.|+++|.|+|++..-+... . ....++.+|+++...+.-++.+.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 346999999999997655432 1 23578999999988776666554
No 386
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=60.97 E-value=80 Score=29.48 Aligned_cols=113 Identities=11% Similarity=-0.079 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCC------------HHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDIN------------EKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did------------~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
.+.++|=-|+ +|.|+.+.|..+ .+..|+.+|.+ ...++.+...+...+ ..+.++.+|+.
T Consensus 9 ~gk~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~ 81 (287)
T 3pxx_A 9 QDKVVLVTGG-ARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG------RKAYTAEVDVR 81 (287)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT------SCEEEEECCTT
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC------CceEEEEccCC
Confidence 3556776665 455666555432 36789999987 777777766666443 24567788877
Q ss_pred cccC-----C-----CCCeeEEEEcCCCcccc--CCccchHHHHH-------HHHHHHhhcccCCCcEEEEEec
Q psy19 377 QLCF-----K-----PACVDGIVTDLPFGKRV--GSKSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 377 ~l~~-----~-----~~~~D~IVtNPPYG~r~--~~~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+..- . -+.+|++|.|--+.... .+.++....+. .+++.+...++.+ |+++.+++
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS 154 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGS 154 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEecc
Confidence 6420 0 14789999996543211 11111111111 2445666677777 88888766
No 387
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=60.86 E-value=65 Score=30.63 Aligned_cols=76 Identities=12% Similarity=0.096 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.|.++|=-|.++| |+.+.|..+ .++.|+..|.+++.++.+.+.++..|. ++.++++|+.+..-
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~------~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK------EVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC------cEEEEEccCCCHHHHHHHHHHH
Confidence 4567777775554 655555432 378999999999999998888876553 35677888866420
Q ss_pred --CCCCeeEEEEcCC
Q psy19 381 --KPACVDGIVTDLP 393 (494)
Q Consensus 381 --~~~~~D~IVtNPP 393 (494)
.-+..|++|.|-=
T Consensus 79 ~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 79 FETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 0157999999853
No 388
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=59.76 E-value=46 Score=30.78 Aligned_cols=113 Identities=11% Similarity=0.089 Sum_probs=64.5
Q ss_pred CCCEEEEEcCC-cChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C------
Q psy19 311 PGDVFLDPMCG-GGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F------ 380 (494)
Q Consensus 311 ~g~~VLDP~CG-SGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~------ 380 (494)
.+.++|=.|++ +|.|+.+.|..+ .++.|+..+.+....+.++.-....+ .+.++.+|+.+.. .
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~ 85 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-------SELVFPCDVADDAQIDALFAS 85 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-------CCCEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC-------CcEEEECCCCCHHHHHHHHHH
Confidence 56778877764 366776655442 36789999888655444444333322 2457778876642 0
Q ss_pred ---CCCCeeEEEEcCCCccc------c-C--CccchHHHHH-------HHHHHHhhcccCCCcEEEEEec
Q psy19 381 ---KPACVDGIVTDLPFGKR------V-G--SKSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ---~~~~~D~IVtNPPYG~r------~-~--~~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.-+.+|++|.|.-+... . . ...+....+. .+++.+...++++ |+++++++
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS 154 (271)
T 3ek2_A 86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDD-ASLLTLSY 154 (271)
T ss_dssp HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEE-EEEEEEEC
T ss_pred HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccC-ceEEEEec
Confidence 01478999999754321 1 1 1111111111 2445566667766 88888765
No 389
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=59.58 E-value=56 Score=31.32 Aligned_cols=78 Identities=14% Similarity=0.209 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
.+.++|=.|++ |.|+.+.|..+ .+..|+.++.++..++.+...+...+ ..+.++.+|+.+.. . .
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG------FDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEccCCCHHHHHHHHHHH
Confidence 45677776665 55665554432 36789999999999888877776543 23567788887642 1 0
Q ss_pred ---CCCeeEEEEcCCCc
Q psy19 382 ---PACVDGIVTDLPFG 395 (494)
Q Consensus 382 ---~~~~D~IVtNPPYG 395 (494)
.+.+|++|.|.-+.
T Consensus 103 ~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHSSCSEEEECCCCC
T ss_pred HHhCCCCCEEEECCCcC
Confidence 14789999997544
No 390
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=59.12 E-value=56 Score=29.97 Aligned_cols=113 Identities=14% Similarity=0.063 Sum_probs=66.3
Q ss_pred CCEEEEEcCCcChHHHHHHhcC---CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY---PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~---~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
+.++|= .-|+|.|+.+.+..+ .+..|++++.++..++.+...+...+ ..+.++.+|+.+.. . .
T Consensus 4 ~k~vlI-TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 4 IHVALV-TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG------LSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCEEEE-SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT------CCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC------CeeEEEECCCCCHHHHHHHHHHH
Confidence 445554 446787877665432 36789999999888777777766433 23467778876542 0 0
Q ss_pred ---CCCeeEEEEcCCCccccCC----ccchHHHHH-------HHHHHHhhcccCCCcEEEEEecC
Q psy19 382 ---PACVDGIVTDLPFGKRVGS----KSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 382 ---~~~~D~IVtNPPYG~r~~~----~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
.+.+|+||.|--....... ..+....+. .+++.+...++++ |+++++++.
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~~sS~ 140 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSSI 140 (276)
T ss_dssp HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCH
T ss_pred HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC-CEEEEECCh
Confidence 1379999988643211100 111111111 2445566666666 888887764
No 391
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=58.60 E-value=1.5e+02 Score=29.78 Aligned_cols=132 Identities=14% Similarity=0.023 Sum_probs=71.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCCCCeeEEEE
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVT 390 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~~~~D~IVt 390 (494)
.+.+||++.-+-|.+....+ +...++.+.=+.-.... +..+|+.. .. .+. .......+|+|+.
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~---~~~~~~~~~~~~~~~~~----l~~~~~~~------~~--~~~--~~~~~~~~d~v~~ 107 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLE---GRMAVERLETSRAAFRC----LTASGLQA------RL--ALP--WEAAAGAYDLVVL 107 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGB---TTBEEEEEECBHHHHHH----HHHTTCCC------EE--CCG--GGSCTTCEEEEEE
T ss_pred hCCcEEEecCCCCccccccC---CCCceEEEeCcHHHHHH----HHHcCCCc------cc--cCC--ccCCcCCCCEEEE
Confidence 44689999999987654332 13456665333333333 66666521 11 111 1112368999999
Q ss_pred cCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHhccccceeeeeEEEccCCceEEEEEEe
Q psy19 391 DLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITSALWKCRKQIKINMSGMKSFVFILN 468 (494)
Q Consensus 391 NPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~~~~l~~~~~~~~v~~Ggl~~~i~v~~ 468 (494)
-.|=. .. ..+....|.++.+.|+|| |++++......-+++........+.... ..-..++..|.++...
T Consensus 108 ~~Pk~------k~-~~~~~~~l~~~~~~l~~g-~~i~~~g~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~ 176 (381)
T 3dmg_A 108 ALPAG------RG-TAYVQASLVAAARALRMG-GRLYLAGDKNKGFERYFKEARALLGYGV-VVRREGPYRVALLEKE 176 (381)
T ss_dssp ECCGG------GC-HHHHHHHHHHHHHHEEEE-EEEEEEEEGGGTHHHHHHHHHHHHSCEE-EEEEETTEEEEEEECC
T ss_pred ECCcc------hh-HHHHHHHHHHHHHhCCCC-CEEEEEEccHHHHHHHHHHHHhhhcccc-ccccccCcEEEEEEcc
Confidence 77721 11 223455677788999998 9988887665555555544321111111 1222455555555554
No 392
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=58.21 E-value=78 Score=29.31 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CcChHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C-
Q psy19 311 PGDVFLDPMC-GGGTIPVECSLS--YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K- 381 (494)
Q Consensus 311 ~g~~VLDP~C-GSGtilIEAA~~--~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~- 381 (494)
.+.++|=.|+ |+| |+.+.+.. -.+..|+.++.+...++.+...+...+ ...+.++.+|+.+.. . .
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-----LGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-----SSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-----CCceEEEEeCCCCHHHHHHHHHH
Confidence 3556666554 333 54444432 136889999999998888877775432 235678888887642 0 0
Q ss_pred ----CCCeeEEEEcCCCc
Q psy19 382 ----PACVDGIVTDLPFG 395 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG 395 (494)
-+.+|++|.|.-+.
T Consensus 95 ~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHhCCCcEEEECCCcC
Confidence 14789999997653
No 393
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=57.40 E-value=12 Score=37.09 Aligned_cols=99 Identities=14% Similarity=0.024 Sum_probs=53.1
Q ss_pred HHhCCCCCCEEEEEcCC--cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cC
Q psy19 305 RLASPIPGDVFLDPMCG--GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CF 380 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CG--SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~ 380 (494)
..++.++|++||=.|++ .|.+++.+|....+..|++++ ++...+.++ .|. ...+. ...|+.+. ..
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga----~~~~~-~~~~~~~~~~~~ 204 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSV----THLFD-RNADYVQEVKRI 204 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGS----SEEEE-TTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCC----cEEEc-CCccHHHHHHHh
Confidence 44678899999988873 456666666654457899988 443333333 232 11111 11111110 11
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
..+.+|+|+-. .+.. .+..+.+.|+++ |+++++.
T Consensus 205 ~~~g~Dvv~d~------~g~~---------~~~~~~~~l~~~-G~~v~~G 238 (349)
T 4a27_A 205 SAEGVDIVLDC------LCGD---------NTGKGLSLLKPL-GTYILYG 238 (349)
T ss_dssp CTTCEEEEEEE------CC----------------CTTEEEE-EEEEEEC
T ss_pred cCCCceEEEEC------CCch---------hHHHHHHHhhcC-CEEEEEC
Confidence 23579988863 2221 012577899998 9988764
No 394
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=56.69 E-value=95 Score=28.70 Aligned_cols=115 Identities=15% Similarity=0.150 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCcC-hHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C-
Q psy19 311 PGDVFLDPMCGGG-TIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSG-tilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~- 381 (494)
.+.++|=.|+++| .|+.+.|..+ .+..|+.++.+....+.+.+-....+ ...+.++.+|+.+.. . .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD-----RNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS-----SCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC-----CCCceEEeCCCCCHHHHHHHHHH
Confidence 3556777776532 2554444331 36789999988765555555444332 124577888887642 1 0
Q ss_pred ----CCCeeEEEEcCCCccc---cC-----CccchHHHH-------HHHHHHHhhcccCCCcEEEEEec
Q psy19 382 ----PACVDGIVTDLPFGKR---VG-----SKSNNFLLY-------RLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG~r---~~-----~~~~~~~ly-------~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.+.+|++|.|.-+... .. ...+....+ -.+++.+...++++ |+++++++
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS 148 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG-GSIVTLTY 148 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEEC
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-ceEEEEec
Confidence 1478999999765321 01 111111111 12445666777777 99988876
No 395
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=56.37 E-value=23 Score=34.69 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=60.1
Q ss_pred hCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c-CC
Q psy19 307 ASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C-FK 381 (494)
Q Consensus 307 a~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~-~~ 381 (494)
++++++++||-.|+ |.|..++.+|... +++|+++|.++..++.++. .|.. ..++....|+.+ + . ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~ga~----~~~d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKA----LGAD----ETVNYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS----EEEETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCC----EEEcCCcccHHHHHHHHhC
Confidence 46788999999998 4566666666543 6799999999998887763 2321 011111111111 1 0 11
Q ss_pred CCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 382 PACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 382 ~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
...+|+||-+-. + .. +..+.+.|+++ |+++++.
T Consensus 233 ~~~~d~vi~~~g-~------~~--------~~~~~~~l~~~-G~~v~~g 265 (343)
T 2eih_A 233 GKGADKVVDHTG-A------LY--------FEGVIKATANG-GRIAIAG 265 (343)
T ss_dssp TTCEEEEEESSC-S------SS--------HHHHHHHEEEE-EEEEESS
T ss_pred CCCceEEEECCC-H------HH--------HHHHHHhhccC-CEEEEEe
Confidence 237999998642 1 11 22466788998 9888764
No 396
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=56.31 E-value=1e+02 Score=29.67 Aligned_cols=79 Identities=11% Similarity=0.033 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C-------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~------- 380 (494)
.+.++|=.|++ |.|+.+.+..+ .+..|++++.++..++.+...+...+. ...+.++.+|+.+.. .
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS----GPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CCeEEEEECCCCCHHHHHHHHHHH
Confidence 35567777754 55665555432 367899999999988888877765432 224677888887642 0
Q ss_pred --CCCCeeEEEEcCCC
Q psy19 381 --KPACVDGIVTDLPF 394 (494)
Q Consensus 381 --~~~~~D~IVtNPPY 394 (494)
..+.+|++|.|--+
T Consensus 82 ~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 82 EARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHTCCEEEEEECCCC
T ss_pred HHhCCCCCEEEECCCc
Confidence 01478999999754
No 397
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=56.25 E-value=67 Score=30.06 Aligned_cols=78 Identities=12% Similarity=0.039 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCC------------HHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDIN------------EKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did------------~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
.+.++|=.| |+|.|+.+.|..+ .+..|+.+|.+ ++.++.+...+...+ ..+.++.+|+.
T Consensus 12 ~gk~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~ 84 (278)
T 3sx2_A 12 TGKVAFITG-AARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG------SRIVARQADVR 84 (278)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT------CCEEEEECCTT
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC------CeEEEEeCCCC
Confidence 456677666 4566666555432 36889999987 777776666665443 24567888887
Q ss_pred ccc-C----C-----CCCeeEEEEcCCCc
Q psy19 377 QLC-F----K-----PACVDGIVTDLPFG 395 (494)
Q Consensus 377 ~l~-~----~-----~~~~D~IVtNPPYG 395 (494)
+.. . . -+.+|++|.|--+.
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 642 0 0 14789999997543
No 398
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=56.20 E-value=25 Score=34.80 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=34.2
Q ss_pred hCCCCCCEEEEEcCC-cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q psy19 307 ASPIPGDVFLDPMCG-GGTIPVECSLSYPHTFFVCGDINEKLVLKTQA 353 (494)
Q Consensus 307 a~~~~g~~VLDP~CG-SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~ 353 (494)
+++++|++||=.|+| .|.+++.+|+...+++|+++|.+++-++.++.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 788899999998874 23344455544436799999999988877763
No 399
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=55.10 E-value=15 Score=36.68 Aligned_cols=48 Identities=21% Similarity=0.118 Sum_probs=35.7
Q ss_pred HHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHH
Q psy19 305 RLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQA 353 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~ 353 (494)
..+++++|++||-.|+|. |.+++.+|+.. ++ .|+++|.++..++.+++
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHH
Confidence 456788999999998753 55566666554 56 79999999988887763
No 400
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=55.02 E-value=1.1e+02 Score=28.41 Aligned_cols=80 Identities=10% Similarity=0.046 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.+.++|=-|++ |.|+.+.|..+ .++.|+..|.++..++.+...+....- ...+.++.+|+.+..-
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP----GARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----CceEEEEeCCCCCHHHHHHHHHHH
Confidence 34566766654 55665555432 367899999999988888777764210 1235677788766420
Q ss_pred --CCCCeeEEEEcCCCc
Q psy19 381 --KPACVDGIVTDLPFG 395 (494)
Q Consensus 381 --~~~~~D~IVtNPPYG 395 (494)
.-+.+|++|.|.-+.
T Consensus 82 ~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 82 ERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHCSCSEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 014789999997653
No 401
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=54.76 E-value=16 Score=35.81 Aligned_cols=102 Identities=12% Similarity=0.054 Sum_probs=61.1
Q ss_pred HHhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeee-ccccc--c
Q psy19 305 RLASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVC-NVRQL--C 379 (494)
Q Consensus 305 ~la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~-Da~~l--~ 379 (494)
..+++++|++||-.|| |.|..++.+|... +++|+++|.++..++.+++. .|. ...++.... |+... .
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~---~g~----~~~~d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTK---FGF----DDAFNYKEESDLTAALKR 220 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT---SCC----SEEEETTSCSCSHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---cCC----ceEEecCCHHHHHHHHHH
Confidence 4467889999999987 4566666666543 67999999999887776532 232 101111110 11110 0
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
...+.+|+||-+- +. ..+..+.+.|+++ |+++++.
T Consensus 221 ~~~~~~d~vi~~~------g~---------~~~~~~~~~l~~~-G~~v~~G 255 (345)
T 2j3h_A 221 CFPNGIDIYFENV------GG---------KMLDAVLVNMNMH-GRIAVCG 255 (345)
T ss_dssp HCTTCEEEEEESS------CH---------HHHHHHHTTEEEE-EEEEECC
T ss_pred HhCCCCcEEEECC------CH---------HHHHHHHHHHhcC-CEEEEEc
Confidence 1124699998753 21 1234577899998 9988763
No 402
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=54.44 E-value=63 Score=30.28 Aligned_cols=78 Identities=12% Similarity=0.027 Sum_probs=50.3
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~--- 381 (494)
+.++|=.| |+|.|+.+++..+ .+..|++++.++..++.....+...+. ...+.++.+|+.+.. . .
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY----PGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----SSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC----CceEEEEEecCCCHHHHHHHHHHHH
Confidence 45666555 5667766655432 367899999999887777666665432 234567778876542 0 0
Q ss_pred --CCCeeEEEEcCCC
Q psy19 382 --PACVDGIVTDLPF 394 (494)
Q Consensus 382 --~~~~D~IVtNPPY 394 (494)
-+.+|+||.|.-+
T Consensus 107 ~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 107 SQHSGVDICINNAGL 121 (279)
T ss_dssp HHHCCCSEEEECCCC
T ss_pred HhCCCCCEEEECCCC
Confidence 1368999998754
No 403
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=53.87 E-value=52 Score=29.83 Aligned_cols=76 Identities=14% Similarity=0.042 Sum_probs=48.9
Q ss_pred CEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHH-hccCCCCcccceeeeeecccccc-----CC---
Q psy19 313 DVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVL-HNSGNLNRELKVSPLVCNVRQLC-----FK--- 381 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~-~~g~~~~~~~~i~~~~~Da~~l~-----~~--- 381 (494)
.++|=.| |+|.|+.+.+..+ .+..|+..+.++..++.+...+. ..+ ..+.++.+|+.+.. +.
T Consensus 3 k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 3 KVAVITG-ASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG------VEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC------CCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC------CeEEEEEeccCCHHHHHHHHHHHH
Confidence 3455555 4566766665542 36789999999988877776664 222 24567788887642 11
Q ss_pred --CCCeeEEEEcCCCc
Q psy19 382 --PACVDGIVTDLPFG 395 (494)
Q Consensus 382 --~~~~D~IVtNPPYG 395 (494)
-+.+|++|.|.-..
T Consensus 76 ~~~g~id~li~~Ag~~ 91 (235)
T 3l77_A 76 ERFGDVDVVVANAGLG 91 (235)
T ss_dssp HHHSSCSEEEECCCCC
T ss_pred HhcCCCCEEEECCccc
Confidence 13789999997543
No 404
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=52.71 E-value=55 Score=31.70 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhccCCCCcccceeee--eeccccccCCCCCeeEEEEcCCCc
Q psy19 345 EKLVLKTQANVLHNSGNLNRELKVSPL--VCNVRQLCFKPACVDGIVTDLPFG 395 (494)
Q Consensus 345 ~~al~~Ar~Nl~~~g~~~~~~~~i~~~--~~Da~~l~~~~~~~D~IVtNPPYG 395 (494)
++.+..+...++. +.+. +.|+.++--....=|+|.+||||-
T Consensus 156 ~~~l~~~~~~l~~----------v~i~~~~~Df~~~i~~~~~~~fvY~DPPY~ 198 (284)
T 2dpm_A 156 EELISAISVYINN----------NQLEIKVGDFEKAIVDVRTGDFVYFDPPYI 198 (284)
T ss_dssp HHHHHHHHHHHHH----------SEEEEEESCGGGGGTTCCTTCEEEECCCCC
T ss_pred HHHHHHHHHHhCC----------CEEEEeCCCHHHHHHhcCCCCEEEeCCCcc
Confidence 4556555555542 3566 999988721113457999999994
No 405
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=52.70 E-value=17 Score=36.22 Aligned_cols=48 Identities=19% Similarity=0.140 Sum_probs=35.5
Q ss_pred HHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHH
Q psy19 305 RLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQA 353 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~ 353 (494)
..+++++|++||-.|+|. |.+++.+|+.. ++ .|+++|.+++.++.+++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH
Confidence 346788999999998754 55566666554 56 79999999988877753
No 406
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=52.45 E-value=15 Score=38.24 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=43.3
Q ss_pred ccccccchHHHHHHH----HHHhCCCCCCEEEEEcCCcChHHHHHHhcC----C-CCeEEEEeCCHHHHHHHHHHHHh
Q psy19 289 EFNITTLKPTIAYNM----VRLASPIPGDVFLDPMCGGGTIPVECSLSY----P-HTFFVCGDINEKLVLKTQANVLH 357 (494)
Q Consensus 289 ~~~~a~L~e~lAa~l----l~la~~~~g~~VLDP~CGSGtilIEAA~~~----~-~~~v~G~Did~~al~~Ar~Nl~~ 357 (494)
|++...+.+-.+..+ +.+........|++.|.|+|++..-+...+ + ...++.+|+++..-+.-++.+..
T Consensus 111 FiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 111 FVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred ccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 444445555444433 332211124689999999999876554321 1 23788999999888777777763
No 407
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=52.09 E-value=53 Score=30.94 Aligned_cols=77 Identities=12% Similarity=0.002 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
.+.++|=.| |+|.|+.+.|..+ .++.|++.+.++..++.....+...+. .+.++.+|+.+.. . .
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL------EGRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC------CCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC------cEEEEEEeCCCHHHHHHHHHHH
Confidence 355666555 5666766655432 368999999999988887777765542 2356677776541 0 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 100 ~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 100 LKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1478999999754
No 408
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=51.88 E-value=1.6e+02 Score=27.86 Aligned_cols=113 Identities=14% Similarity=0.042 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCcC-hHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-------
Q psy19 311 PGDVFLDPMCGGG-TIPVECSLS--YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSG-tilIEAA~~--~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~------- 380 (494)
.+.++|=.|+++| .|+.+.|.. -.++.|+..+.++...+.+..-....+ .+.++.+|+.+..-
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG-------AFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT-------CEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------CceEEECCCCCHHHHHHHHHH
Confidence 4667888887654 355444432 136789999999766555554444322 24577788766420
Q ss_pred ---CCCCeeEEEEcCCCccc------c-C-CccchHHHH-------HHHHHHHhhcccCCCcEEEEEec
Q psy19 381 ---KPACVDGIVTDLPFGKR------V-G-SKSNNFLLY-------RLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 ---~~~~~D~IVtNPPYG~r------~-~-~~~~~~~ly-------~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.-+.+|++|.|--+... + . ..++....+ -.+++.+...++.+ |+++.+++
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS 170 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTY 170 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEEC
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEee
Confidence 01479999999754321 0 0 111111111 12445566666777 99988876
No 409
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=51.72 E-value=17 Score=36.14 Aligned_cols=48 Identities=21% Similarity=0.095 Sum_probs=35.4
Q ss_pred HHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHH
Q psy19 305 RLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQA 353 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~ 353 (494)
..+++++|++||-.|+|. |.+++.+|+.. ++ .|+++|.+++.++.++.
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH
Confidence 446778999999998753 55556666554 56 89999999988777753
No 410
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=51.66 E-value=14 Score=36.71 Aligned_cols=48 Identities=15% Similarity=0.052 Sum_probs=35.3
Q ss_pred HHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHH
Q psy19 305 RLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQA 353 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~ 353 (494)
..+++++|++||-.|||. |.+++.+|+.. ++ .|+++|.++..++.+++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHH
Confidence 456788999999998753 55555555543 55 79999999988877763
No 411
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=51.39 E-value=15 Score=36.61 Aligned_cols=48 Identities=21% Similarity=0.150 Sum_probs=35.3
Q ss_pred HHhCCCCCCEEEEEcCCc-ChHHHHHHhcCCCC-eEEEEeCCHHHHHHHHH
Q psy19 305 RLASPIPGDVFLDPMCGG-GTIPVECSLSYPHT-FFVCGDINEKLVLKTQA 353 (494)
Q Consensus 305 ~la~~~~g~~VLDP~CGS-GtilIEAA~~~~~~-~v~G~Did~~al~~Ar~ 353 (494)
..+++++|++||-.|+|. |.+++.+|+.. ++ .|+++|.+++.++.+++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH
Confidence 456788999999998653 45555555543 55 79999999988887763
No 412
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=51.06 E-value=1.1e+02 Score=28.52 Aligned_cols=75 Identities=8% Similarity=0.018 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.+.++|=.|+++ .|+.+.|..+ .+..|+..|.++..++.+...+...+ ..+.++.+|+.+..-
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 10 TDKVVVISGVGP-ALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG------RRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TTCEEEEESCCT-THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCc-HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHH
Confidence 456777777654 4555544432 36889999999998888887776543 235677888776420
Q ss_pred --CCCCeeEEEEcC
Q psy19 381 --KPACVDGIVTDL 392 (494)
Q Consensus 381 --~~~~~D~IVtNP 392 (494)
.-+.+|++|.|-
T Consensus 83 ~~~~g~id~lv~nA 96 (264)
T 3ucx_A 83 MKAYGRVDVVINNA 96 (264)
T ss_dssp HHHTSCCSEEEECC
T ss_pred HHHcCCCcEEEECC
Confidence 014789999997
No 413
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=51.04 E-value=37 Score=31.79 Aligned_cols=77 Identities=10% Similarity=0.000 Sum_probs=51.2
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~--- 381 (494)
+.++|=.| |+|.|+.+.|..+ .+..|+..+.++..++.+...+...+ ...+.++.+|+.+.. . .
T Consensus 10 ~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 10 GRSVVVTG-GTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-----SGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-----SSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45566555 5666766655442 36789999999998888877776443 134677888887642 0 0
Q ss_pred --CCCeeEEEEcCCC
Q psy19 382 --PACVDGIVTDLPF 394 (494)
Q Consensus 382 --~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 84 ~~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 84 EEFGGIDVVCANAGV 98 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 1378999998654
No 414
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=51.00 E-value=79 Score=29.28 Aligned_cols=78 Identities=10% Similarity=-0.002 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~-- 381 (494)
.+.++|=.|++ |.|+.+.|..+ .+..|+..|.++..++.+...+...+ ..+.++.+|+.+..- .
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG------GRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEECcCCCHHHHHHHHHHH
Confidence 34566666654 55665555432 36789999999988888887776543 245778888876420 0
Q ss_pred --CCCeeEEEEcCCCc
Q psy19 382 --PACVDGIVTDLPFG 395 (494)
Q Consensus 382 --~~~~D~IVtNPPYG 395 (494)
.+.+|++|.|.-..
T Consensus 79 ~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGAN 94 (252)
T ss_dssp HHHSCEEEEEECCCCC
T ss_pred HhhCCceEEEECCCcC
Confidence 14789999997643
No 415
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=50.85 E-value=27 Score=34.43 Aligned_cols=58 Identities=9% Similarity=0.059 Sum_probs=35.2
Q ss_pred eeccccccCCCCCeeEEEEcC--CCcccc-CCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 372 VCNVRQLCFKPACVDGIVTDL--PFGKRV-GSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 372 ~~Da~~l~~~~~~~D~IVtNP--PYG~r~-~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
+.|+...+. .+.+|+|++|+ ||.... ..-.|...+..-++..+.++|+|| |.+++-.-
T Consensus 195 ~lDfg~p~~-~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPG-GtfV~Kvy 255 (320)
T 2hwk_A 195 RLDLGIPGD-VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPG-GTCVSIGY 255 (320)
T ss_dssp CGGGCSCTT-SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEE-EEEEEEEC
T ss_pred ccccCCccc-cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCC-ceEEEEEe
Confidence 667766332 26799999995 442111 100222233333777899999999 98887544
No 416
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=50.82 E-value=56 Score=30.60 Aligned_cols=77 Identities=9% Similarity=0.021 Sum_probs=50.6
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHh-ccCCCCcccceeeeeeccccccC-----C--
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLH-NSGNLNRELKVSPLVCNVRQLCF-----K-- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~-~g~~~~~~~~i~~~~~Da~~l~~-----~-- 381 (494)
+.++|=-|+ +|.|+.+.|..+ .++.|+..+.++..++.+...+.. .+ ..+.++.+|+.+..- .
T Consensus 20 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 20 GKRALITGA-TKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG------TDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC------CCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHHH
Confidence 456665554 566766655442 367899999999888877776654 22 245778888876521 0
Q ss_pred ---CCCeeEEEEcCCCc
Q psy19 382 ---PACVDGIVTDLPFG 395 (494)
Q Consensus 382 ---~~~~D~IVtNPPYG 395 (494)
-+.+|++|.|.-+.
T Consensus 93 ~~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHHHTSCSEEEEECCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 14789999997543
No 417
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.62 E-value=19 Score=30.16 Aligned_cols=67 Identities=4% Similarity=-0.030 Sum_probs=41.0
Q ss_pred CEEEEEcCCcChHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc----CCCCCee
Q psy19 313 DVFLDPMCGGGTIPVECSLS--YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC----FKPACVD 386 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~--~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~----~~~~~~D 386 (494)
..|+=.|| |.++...+.. -.+..++++|.+++.++.++. .+ +.++.+|..+.. ..-..+|
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~--------~~~~~gd~~~~~~l~~~~~~~~d 72 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG--------FDAVIADPTDESFYRSLDLEGVS 72 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT--------CEEEECCTTCHHHHHHSCCTTCS
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC--------CcEEECCCCCHHHHHhCCcccCC
Confidence 34665565 5565554433 236789999999998776653 12 245667765531 1124689
Q ss_pred EEEEcCC
Q psy19 387 GIVTDLP 393 (494)
Q Consensus 387 ~IVtNPP 393 (494)
+||.-.|
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 8888555
No 418
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=50.05 E-value=73 Score=30.40 Aligned_cols=113 Identities=11% Similarity=0.033 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCc-ChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C-
Q psy19 311 PGDVFLDPMCGG-GTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K- 381 (494)
Q Consensus 311 ~g~~VLDP~CGS-GtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~- 381 (494)
.+.++|=.|+++ +.|+.+.|..+ .++.|+..|.++...+.+..-....+ .+.++.+|+.+..- .
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-------VKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-------CCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-------CeEEEEcCCCCHHHHHHHHHH
Confidence 456788777654 35554444331 37889999999765555544444332 13567788766420 0
Q ss_pred ----CCCeeEEEEcCCCccc------cC--CccchHHHH-------HHHHHHHhhcccCCCcEEEEEec
Q psy19 382 ----PACVDGIVTDLPFGKR------VG--SKSNNFLLY-------RLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG~r------~~--~~~~~~~ly-------~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
-+.+|++|.|--+... +. ..++....+ -.+++.+...++.+ |+++.+++
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~IV~isS 169 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNG-GSILTLSY 169 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CEEEEEEe
Confidence 1478999999754321 10 111111111 12445666677777 99988876
No 419
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=49.18 E-value=11 Score=36.71 Aligned_cols=95 Identities=9% Similarity=-0.061 Sum_probs=58.6
Q ss_pred HHHhCCCCCCEEEEEcCC-cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccCCC
Q psy19 304 VRLASPIPGDVFLDPMCG-GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKP 382 (494)
Q Consensus 304 l~la~~~~g~~VLDP~CG-SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~~~ 382 (494)
+..+++++|++||=.|+| .|.+++.+|+.. +++|++++ +++-++.+++ .|. . .++. |...+ .
T Consensus 135 l~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~----lGa----~---~v~~-d~~~v---~ 197 (315)
T 3goh_A 135 FEKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAK----RGV----R---HLYR-EPSQV---T 197 (315)
T ss_dssp HTTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHH----HTE----E---EEES-SGGGC---C
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHH----cCC----C---EEEc-CHHHh---C
Confidence 345567899999999985 366666666554 67999999 8877777754 232 1 1222 42222 3
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEec
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
..+|+|+-. .+.. . +..+.+.|+++ |+++++..
T Consensus 198 ~g~Dvv~d~------~g~~-~--------~~~~~~~l~~~-G~~v~~g~ 230 (315)
T 3goh_A 198 QKYFAIFDA------VNSQ-N--------AAALVPSLKAN-GHIICIQD 230 (315)
T ss_dssp SCEEEEECC----------------------TTGGGEEEE-EEEEEECC
T ss_pred CCccEEEEC------CCch-h--------HHHHHHHhcCC-CEEEEEeC
Confidence 578887742 2211 0 12467889998 99888743
No 420
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=49.17 E-value=58 Score=29.86 Aligned_cols=73 Identities=5% Similarity=-0.081 Sum_probs=46.4
Q ss_pred CEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C---------
Q psy19 313 DVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F--------- 380 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~--------- 380 (494)
.++|=.| |+|.|+.+.+..+ .+..|+..+.++..++.....+. ..+.++.+|+.+.. .
T Consensus 4 k~vlVTG-as~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~ 73 (235)
T 3l6e_A 4 GHIIVTG-AGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---------NAVIGIVADLAHHEDVDVAFAAAVE 73 (235)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------CCceEEECCCCCHHHHHHHHHHHHH
Confidence 3555555 4566666655432 36889999999988776665552 12467778876541 0
Q ss_pred CCCCeeEEEEcCCCc
Q psy19 381 KPACVDGIVTDLPFG 395 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG 395 (494)
..+.+|++|.|--++
T Consensus 74 ~~g~id~lvnnAg~~ 88 (235)
T 3l6e_A 74 WGGLPELVLHCAGTG 88 (235)
T ss_dssp HHCSCSEEEEECCCC
T ss_pred hcCCCcEEEECCCCC
Confidence 014789999997543
No 421
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=49.07 E-value=16 Score=35.01 Aligned_cols=28 Identities=14% Similarity=0.000 Sum_probs=21.8
Q ss_pred ceeeeeeccccccCCCCCeeEEEEcCCCcc
Q psy19 367 KVSPLVCNVRQLCFKPACVDGIVTDLPFGK 396 (494)
Q Consensus 367 ~i~~~~~Da~~l~~~~~~~D~IVtNPPYG~ 396 (494)
.+.+.+.|+.++- ...=|+|.+||||-.
T Consensus 149 ~v~i~~~Df~~~i--~~~~~fvY~DPPY~~ 176 (259)
T 1yf3_A 149 KIIFSSLHFKDVK--ILDGDFVYVDPPYLI 176 (259)
T ss_dssp GEEEECCCGGGCC--CCTTEEEEECCCCTT
T ss_pred CCEEEcCCHHHHh--CCCCeEEEECCCCCC
Confidence 4678999998874 345589999999954
No 422
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=48.18 E-value=1.1e+02 Score=28.77 Aligned_cols=77 Identities=9% Similarity=-0.048 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
.+.++|=-|+ +|.|+.+.|..+ .++.|++++.++..++.+...+...+ ..+.++.+|+.+.. . .
T Consensus 23 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 23 RPQTAFVTGV-SSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG------HDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp --CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHHH
Confidence 3567777665 555665555432 36889999999998888877776443 24567788877642 0 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 96 ~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 96 VERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHCSCCEEEECCCC
T ss_pred HHHcCCCcEEEECCCC
Confidence 1478999998754
No 423
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=48.14 E-value=51 Score=31.10 Aligned_cols=77 Identities=10% Similarity=0.011 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.+.++|=-| |+|.|+.+.|..+ .++.|+..|.++..++.+...+...+ ..+.++.+|+.+..-
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG------HDAEAVAFDVTSESEIIEAFARL 97 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT------CCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEcCCCCHHHHHHHHHHH
Confidence 355666555 5566766655442 36789999999998888877776543 235677778765420
Q ss_pred --CCCCeeEEEEcCCC
Q psy19 381 --KPACVDGIVTDLPF 394 (494)
Q Consensus 381 --~~~~~D~IVtNPPY 394 (494)
..+.+|++|.|--+
T Consensus 98 ~~~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGI 113 (271)
T ss_dssp HHHTCCCCEEEECCCC
T ss_pred HHHCCCCCEEEECCCC
Confidence 11478999999654
No 424
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=47.69 E-value=1.1e+02 Score=28.57 Aligned_cols=78 Identities=15% Similarity=0.106 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCC----------------HHHHHHHHHHHHhccCCCCcccceeeee
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDIN----------------EKLVLKTQANVLHNSGNLNRELKVSPLV 372 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did----------------~~al~~Ar~Nl~~~g~~~~~~~~i~~~~ 372 (494)
.+.++|=-|++ |.|+.+.|..+ .++.|+.+|.+ .+.++.....+...+ ..+.++.
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 82 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN------RRIVTAE 82 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT------CCEEEEE
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC------CceEEEE
Confidence 45677766665 44655555432 36889999987 666666666555332 2456778
Q ss_pred ecccccc-C---------CCCCeeEEEEcCCCc
Q psy19 373 CNVRQLC-F---------KPACVDGIVTDLPFG 395 (494)
Q Consensus 373 ~Da~~l~-~---------~~~~~D~IVtNPPYG 395 (494)
+|+.+.. . .-+.+|++|.|.-+.
T Consensus 83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 8887642 0 014789999997543
No 425
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=47.34 E-value=50 Score=32.77 Aligned_cols=96 Identities=8% Similarity=-0.102 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCC--cChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--cCCCCCe
Q psy19 310 IPGDVFLDPMCG--GGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--CFKPACV 385 (494)
Q Consensus 310 ~~g~~VLDP~CG--SGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~~~~~~~ 385 (494)
++|++||=.|++ .|.+++.+|+.. +++++++. +++-++.+++ .|. ...++....|+.+. ....+.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~----lGa----~~vi~~~~~~~~~~v~~~t~g~~ 232 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKS----RGA----EEVFDYRAPNLAQTIRTYTKNNL 232 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHH----TTC----SEEEETTSTTHHHHHHHHTTTCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHH----cCC----cEEEECCCchHHHHHHHHccCCc
Confidence 788999988873 677777777654 67888885 6766665543 332 11111212222111 1112458
Q ss_pred eEEEEcCCCccccCCccchHHHHHHHHHHHhhcc-cCCCcEEEEEe
Q psy19 386 DGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIV-RPQIGRAILLT 430 (494)
Q Consensus 386 D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvL-kpg~G~lvllt 430 (494)
|+|+- ..+.. ..+..+.+.| +++ |+++++.
T Consensus 233 d~v~d------~~g~~--------~~~~~~~~~l~~~~-G~iv~~g 263 (371)
T 3gqv_A 233 RYALD------CITNV--------ESTTFCFAAIGRAG-GHYVSLN 263 (371)
T ss_dssp CEEEE------SSCSH--------HHHHHHHHHSCTTC-EEEEESS
T ss_pred cEEEE------CCCch--------HHHHHHHHHhhcCC-CEEEEEe
Confidence 98876 23321 2233466677 588 9887753
No 426
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=47.16 E-value=1.3e+02 Score=27.82 Aligned_cols=77 Identities=16% Similarity=0.065 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~-- 381 (494)
.+.++|=.|+ +|.|+.+.+..+ .++.|+..|.++..++.+...+...+ ..+.++.+|+.+..- .
T Consensus 11 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 11 NDAVAIVTGA-AAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG------GKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp TTCEEEECSC-SSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHHH
Confidence 3456665554 556666555432 26789999999998888777776543 235677888776420 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|.-+
T Consensus 84 ~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1478999999654
No 427
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=46.78 E-value=64 Score=30.40 Aligned_cols=74 Identities=9% Similarity=0.070 Sum_probs=47.9
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~--- 381 (494)
+.++|=.| |+|.|+.+.+..+ .+..|++++.++..++.....+...+. ..+.++.+|+.+.. . .
T Consensus 28 ~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~v~~~~~~~~ 101 (286)
T 1xu9_A 28 GKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-----ASAHYIAGTMEDMTFAEQFVAQAG 101 (286)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----SEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-----CceEEEeCCCCCHHHHHHHHHHHH
Confidence 55677555 5566766655432 367899999999888776666554331 23567778876531 0 0
Q ss_pred --CCCeeEEEEc
Q psy19 382 --PACVDGIVTD 391 (494)
Q Consensus 382 --~~~~D~IVtN 391 (494)
-+.+|++|.|
T Consensus 102 ~~~g~iD~li~n 113 (286)
T 1xu9_A 102 KLMGGLDMLILN 113 (286)
T ss_dssp HHHTSCSEEEEC
T ss_pred HHcCCCCEEEEC
Confidence 1478999988
No 428
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=46.72 E-value=1.2e+02 Score=28.38 Aligned_cols=76 Identities=12% Similarity=0.046 Sum_probs=49.7
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C--------
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F-------- 380 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~-------- 380 (494)
+.++|=.|+ +|.|+.+.|..+ .+..|+..+.++..++.+...+...+ ..+.++.+|+.+.. .
T Consensus 4 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~ 76 (264)
T 3tfo_A 4 DKVILITGA-SGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG------GTALAQVLDVTDRHSVAAFAQAAV 76 (264)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 345665554 455666555432 36889999999998888877776543 23567778876542 0
Q ss_pred -CCCCeeEEEEcCCC
Q psy19 381 -KPACVDGIVTDLPF 394 (494)
Q Consensus 381 -~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|--+
T Consensus 77 ~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 77 DTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 01478999999754
No 429
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=46.42 E-value=1.4e+02 Score=28.38 Aligned_cols=113 Identities=11% Similarity=-0.013 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCC--HHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDIN--EKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did--~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~ 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .+..|+..+.+ ....+....-+...+ ..+.++.+|+.+..- .
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG------RKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT------CCEEECCCCTTSHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC------CcEEEEEecCCCHHHHHHHHH
Confidence 3567776665 566766655432 36788888886 344555555444433 235677788765420 0
Q ss_pred -----CCCeeEEEEcCCCccccCC-----ccchHHHHH-------HHHHHHhhcccCCCcEEEEEec
Q psy19 382 -----PACVDGIVTDLPFGKRVGS-----KSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 -----~~~~D~IVtNPPYG~r~~~-----~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~ 431 (494)
-+.+|++|.|--....... .++....+. .+++.+...++.+ |+++.+++
T Consensus 121 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS 186 (294)
T 3r3s_A 121 KAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSS 186 (294)
T ss_dssp HHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECC
Confidence 1478999998754321111 111111111 2455666777777 99888865
No 430
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=46.18 E-value=1e+02 Score=29.17 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.+.++|=.| |+|.|+.+.|..+ .++.|+..|.++..++.+...+...+. ..+.++.+|+.+..-
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 32 EGRIALVTG-GGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-----NIVRAVVCDVGDPDQVAALFAAV 105 (281)
T ss_dssp --CEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CeEEEEEcCCCCHHHHHHHHHHH
Confidence 355666555 5566776665442 368899999999988877776654431 124677788766420
Q ss_pred --CCCCeeEEEEcCCC
Q psy19 381 --KPACVDGIVTDLPF 394 (494)
Q Consensus 381 --~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|--.
T Consensus 106 ~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 106 RAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 01478999999754
No 431
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=46.10 E-value=1.3e+02 Score=28.33 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~-- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .++.|+.+|.++..++.+...+...+ ..+.++.+|+.+.. +.
T Consensus 27 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 27 PSPVALITGA-GSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG------GQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHH
Confidence 3556776665 455666555432 36889999999988887777776432 24567788876641 00
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 100 ~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 1479999998654
No 432
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=46.10 E-value=33 Score=33.88 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=58.5
Q ss_pred HhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c-C
Q psy19 306 LASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C-F 380 (494)
Q Consensus 306 la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~-~ 380 (494)
.+++++|++||-.|+ |.|..++..|... ++.|++++.+++.++.++. .|. ...+.....|+.+ + . .
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga----~~~~d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQ----NGA----HEVFNHREVNYIDKIKKYV 235 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTC----SEEEETTSTTHHHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHH----cCC----CEEEeCCCchHHHHHHHHc
Confidence 457789999999987 3455555555543 6799999999988776543 232 1011111111110 1 0 1
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+|+||-+- +. . .+..+.+.|+++ |+++++.
T Consensus 236 ~~~~~D~vi~~~------G~-----~----~~~~~~~~l~~~-G~iv~~g 269 (351)
T 1yb5_A 236 GEKGIDIIIEML------AN-----V----NLSKDLSLLSHG-GRVIVVG 269 (351)
T ss_dssp CTTCEEEEEESC------HH-----H----HHHHHHHHEEEE-EEEEECC
T ss_pred CCCCcEEEEECC------Ch-----H----HHHHHHHhccCC-CEEEEEe
Confidence 123699998753 11 1 123567889998 9988764
No 433
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=46.04 E-value=1.2e+02 Score=28.64 Aligned_cols=113 Identities=11% Similarity=0.001 Sum_probs=63.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHH-HHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEK-LVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~-al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .++.|+..+.+.. ..+.+..-+...+ ..+.++.+|+.+.. +.
T Consensus 46 ~gk~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 46 KGKNVLITGG-DSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG------VKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT------CCEEEEESCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHH
Confidence 3567776665 555666655432 3678999988765 3344444344322 24567888887642 00
Q ss_pred ----CCCeeEEEEcCCCccccC-----CccchHHHH-------HHHHHHHhhcccCCCcEEEEEec
Q psy19 382 ----PACVDGIVTDLPFGKRVG-----SKSNNFLLY-------RLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG~r~~-----~~~~~~~ly-------~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
-+.+|++|.|--...... ..++....+ -.+++.+...++.+ |+++.+++
T Consensus 119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS 183 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTAS 183 (291)
T ss_dssp HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEec
Confidence 147899999854321111 111111111 12455666777777 88888866
No 434
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=45.89 E-value=53 Score=30.36 Aligned_cols=77 Identities=12% Similarity=0.064 Sum_probs=48.4
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-CHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
+.++|=.| |+|.|+.+.+..+ .+..|++.+. ++..++.....+...+ ..+.++.+|+.+.. . .
T Consensus 21 ~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 21 GKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG------AQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHHH
Confidence 45666444 5677776665432 3678999888 8877766666665433 23567778876542 1 0
Q ss_pred ---CCCeeEEEEcCCCc
Q psy19 382 ---PACVDGIVTDLPFG 395 (494)
Q Consensus 382 ---~~~~D~IVtNPPYG 395 (494)
-+.+|+||.|.-+.
T Consensus 94 ~~~~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGME 110 (274)
T ss_dssp HHHHSCEEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 13789999887543
No 435
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=45.83 E-value=21 Score=35.17 Aligned_cols=100 Identities=13% Similarity=0.083 Sum_probs=59.7
Q ss_pred HHhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc--c-
Q psy19 305 RLASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL--C- 379 (494)
Q Consensus 305 ~la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l--~- 379 (494)
..++.++|++||=.|+ |.|.+++.+|... ++++++++.+++.++.+++ .|.. ..+... .|+.+. .
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~----~v~~~~-~~~~~~v~~~ 222 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKS----VGAD----IVLPLE-EGWAKAVREA 222 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCS----EEEESS-TTHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCc----EEecCc-hhHHHHHHHH
Confidence 4456789999998886 3466666666554 6799999999888777765 2321 011111 121110 1
Q ss_pred CCCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 380 FKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 380 ~~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
.....+|+|+-+- +.. .+..+.+.|+++ |+++++.
T Consensus 223 ~~~~g~Dvvid~~------g~~---------~~~~~~~~l~~~-G~iv~~G 257 (342)
T 4eye_A 223 TGGAGVDMVVDPI------GGP---------AFDDAVRTLASE-GRLLVVG 257 (342)
T ss_dssp TTTSCEEEEEESC------C-----------CHHHHHHTEEEE-EEEEEC-
T ss_pred hCCCCceEEEECC------chh---------HHHHHHHhhcCC-CEEEEEE
Confidence 1123699998743 221 123577789998 9988764
No 436
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=45.42 E-value=1.4e+02 Score=27.80 Aligned_cols=80 Identities=8% Similarity=-0.072 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~-- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .+..|+.+|.++..++.+...+...+. ....+.++.+|+.+..- .
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA---NGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC---SSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC---CCceEEEEeCCCCCHHHHHHHHHHH
Confidence 3556776665 556665555432 368899999999988888887775432 11256788888876420 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
.+.+|++|.|--.
T Consensus 86 ~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 1468999998653
No 437
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=44.28 E-value=60 Score=31.89 Aligned_cols=39 Identities=13% Similarity=0.137 Sum_probs=26.0
Q ss_pred HhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEE-EeCCH
Q psy19 306 LASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVC-GDINE 345 (494)
Q Consensus 306 la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G-~Did~ 345 (494)
.+++++|++||=.|+ |.|.+++.+|+.. ++.+++ ++.++
T Consensus 162 ~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRP 203 (357)
T ss_dssp SSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCS
T ss_pred HhccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCcc
Confidence 457889999999886 4566677776653 565554 45543
No 438
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=44.23 E-value=1.5e+02 Score=27.38 Aligned_cols=78 Identities=17% Similarity=0.087 Sum_probs=49.7
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC------CCC
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF------KPA 383 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~------~~~ 383 (494)
+.++|=-| |+|.|+.+.|..+ .+..|+..|.++..++.+...+...+. ...+.++.+|+.+... .-+
T Consensus 10 ~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 10 GKTALVTG-STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP----DAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT----TCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC----CceEEEEecCCCCHHHHHHHHHhcC
Confidence 45666555 4566666655432 368899999999888877777765431 1234566777765310 114
Q ss_pred CeeEEEEcCCC
Q psy19 384 CVDGIVTDLPF 394 (494)
Q Consensus 384 ~~D~IVtNPPY 394 (494)
.+|++|.|--.
T Consensus 85 ~id~lv~nAg~ 95 (267)
T 3t4x_A 85 KVDILINNLGI 95 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999998654
No 439
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.23 E-value=1.1e+02 Score=26.47 Aligned_cols=104 Identities=11% Similarity=0.038 Sum_probs=55.5
Q ss_pred CCEEEEEcCCcChHHHHHHhc--CC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccc----cC-CCC
Q psy19 312 GDVFLDPMCGGGTIPVECSLS--YP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQL----CF-KPA 383 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~--~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l----~~-~~~ 383 (494)
+..|+=.| .|.++..++.. -. +..|+++|.++..++.++. .|. .++.+|..+. .. .-.
T Consensus 39 ~~~v~IiG--~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g~--------~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILG--MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EGR--------NVISGDATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEEC--CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TTC--------CEEECCTTCHHHHHTBCSCC
T ss_pred CCcEEEEC--CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CCC--------CEEEcCCCCHHHHHhccCCC
Confidence 44566554 56665554433 23 5689999999988766543 232 3455555432 11 124
Q ss_pred CeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHHHHHHHHHh
Q psy19 384 CVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHI 442 (494)
Q Consensus 384 ~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~~l~~~l~~ 442 (494)
.+|+||.-.| .......+ -...+-+.|. ..++..+.+... .+.+..
T Consensus 105 ~ad~vi~~~~------~~~~~~~~-----~~~~~~~~~~-~~ii~~~~~~~~-~~~l~~ 150 (183)
T 3c85_A 105 HVKLVLLAMP------HHQGNQTA-----LEQLQRRNYK-GQIAAIAEYPDQ-LEGLLE 150 (183)
T ss_dssp CCCEEEECCS------SHHHHHHH-----HHHHHHTTCC-SEEEEEESSHHH-HHHHHH
T ss_pred CCCEEEEeCC------ChHHHHHH-----HHHHHHHCCC-CEEEEEECCHHH-HHHHHH
Confidence 6888887433 11111111 1244455566 777777777653 334443
No 440
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=44.14 E-value=90 Score=29.13 Aligned_cols=78 Identities=19% Similarity=0.134 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C-------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~------- 380 (494)
.+.++|=.| |+|.|+.+.+..+ .+..|+++|.++..++.....+...+ ..+.++.+|+.+.. .
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG------AKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC------CeEEEEEeeCCCHHHHHHHHHHH
Confidence 345666555 5667776665432 36789999999988777766665433 23567778876542 0
Q ss_pred --CCCCeeEEEEcCCCc
Q psy19 381 --KPACVDGIVTDLPFG 395 (494)
Q Consensus 381 --~~~~~D~IVtNPPYG 395 (494)
.-+.+|+||.|.-+.
T Consensus 103 ~~~~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 103 KAEIGDVSILVNNAGVV 119 (272)
T ss_dssp HHHTCCCSEEEECCCCC
T ss_pred HHHCCCCcEEEECCCcC
Confidence 014689999997543
No 441
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=44.04 E-value=1.6e+02 Score=27.19 Aligned_cols=77 Identities=9% Similarity=0.059 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
.+.++|=.| |+|.|+.+.|..+ .+..|+.++.++..++.....+...+ ..+.++.+|+.+.. . .
T Consensus 28 ~~k~vlITG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 28 SGQVAVVTG-ASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG------GEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------CceeEEEecCCCHHHHHHHHHHH
Confidence 355677655 4566776665442 36789999999998888877776543 24567788876642 0 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
.+.+|++|.|.-+
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 1468999999754
No 442
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=44.04 E-value=45 Score=30.24 Aligned_cols=61 Identities=13% Similarity=-0.051 Sum_probs=38.5
Q ss_pred CCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc----CCCCCeeEEEEc
Q psy19 320 CGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC----FKPACVDGIVTD 391 (494)
Q Consensus 320 CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~----~~~~~~D~IVtN 391 (494)
||.|.++..+|... .+..++.+|.|++.++..... .+ +.++.+|+.+.. ..-...|+||+-
T Consensus 6 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~--------~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LK--------ATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SS--------SEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cC--------CeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 67787776665432 367899999999987754432 12 246777776531 112467888873
No 443
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=44.03 E-value=91 Score=28.85 Aligned_cols=75 Identities=8% Similarity=0.070 Sum_probs=49.6
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~--- 381 (494)
+.++|=.| |+|.|+.+.|..+ .+++|+.+|.++..++.+...+...+ ..+.++.+|+.+.. . .
T Consensus 6 ~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 6 EKVVIITG-GSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP------GQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST------TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHHH
Confidence 44555544 5566766655442 36789999999998888777765332 24567888887642 0 0
Q ss_pred --CCCeeEEEEcCC
Q psy19 382 --PACVDGIVTDLP 393 (494)
Q Consensus 382 --~~~~D~IVtNPP 393 (494)
-+.+|++|.|.-
T Consensus 79 ~~~g~id~lv~nAg 92 (257)
T 3imf_A 79 EKFGRIDILINNAA 92 (257)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 147899999864
No 444
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=43.99 E-value=1.4e+02 Score=27.60 Aligned_cols=113 Identities=9% Similarity=0.036 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEE-eCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCG-DINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~-Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~- 381 (494)
.+.++|=.|++ |.|+.+.|..+ .++.|+.. +.+....+.+...+...+ ..+.++.+|+.+.. . .
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG------RSALAIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT------SCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CceEEEEcCCCCHHHHHHHHHH
Confidence 35567766654 55665555432 36778777 777777777766666443 23467788877642 0 0
Q ss_pred ----CCCeeEEEEcCCCc-c--ccCC--ccchHHHHH-------HHHHHHhhcccCCCcEEEEEec
Q psy19 382 ----PACVDGIVTDLPFG-K--RVGS--KSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG-~--r~~~--~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~ 431 (494)
-+.+|++|.|--.. . .+.. .++....+. .+.+.+...++++ |+++.+++
T Consensus 80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS 144 (259)
T 3edm_A 80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG-GAIVTFSS 144 (259)
T ss_dssp HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CEEEEEcC
Confidence 14799999986321 1 1111 111111111 2445566667666 88888765
No 445
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=43.54 E-value=47 Score=32.70 Aligned_cols=100 Identities=15% Similarity=0.076 Sum_probs=57.5
Q ss_pred HhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c-C
Q psy19 306 LASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C-F 380 (494)
Q Consensus 306 la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~-~ 380 (494)
.+++++|++||-.|+ |.|..++.++... +++|+++|.+++.++.++. + |.. ..+.....|+.+ + . .
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~-~---g~~----~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEK-L---GAA----AGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH-H---TCS----EEEETTTSCHHHHHHHHT
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH-c---CCc----EEEecCChHHHHHHHHHh
Confidence 456788999998873 3444455555443 6799999999988877743 2 221 001111111111 1 0 1
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+|++|-+- +.. . +..+.+.|+++ |+++++.
T Consensus 228 ~~~~~d~vi~~~------G~~-~--------~~~~~~~l~~~-G~iv~~G 261 (354)
T 2j8z_A 228 KGAGVNLILDCI------GGS-Y--------WEKNVNCLALD-GRWVLYG 261 (354)
T ss_dssp TTSCEEEEEESS------CGG-G--------HHHHHHHEEEE-EEEEECC
T ss_pred cCCCceEEEECC------Cch-H--------HHHHHHhccCC-CEEEEEe
Confidence 123699998753 221 1 22466788998 9988764
No 446
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=43.43 E-value=96 Score=27.99 Aligned_cols=71 Identities=10% Similarity=-0.012 Sum_probs=42.9
Q ss_pred EEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----C--CCCCe
Q psy19 315 FLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----F--KPACV 385 (494)
Q Consensus 315 VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~--~~~~~ 385 (494)
+|=.| |+|.|+.+.+..+ .+..|+..+.++..++.+...+ ...+.++.+|+.+.. + -...+
T Consensus 4 vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 73 (230)
T 3guy_A 4 IVITG-ASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---------SNNVGYRARDLASHQEVEQLFEQLDSIP 73 (230)
T ss_dssp EEEES-TTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---------SSCCCEEECCTTCHHHHHHHHHSCSSCC
T ss_pred EEEec-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---------hhccCeEeecCCCHHHHHHHHHHHhhcC
Confidence 33334 4566766655442 3678999999988766554432 123457777776541 0 11345
Q ss_pred eEEEEcCCCc
Q psy19 386 DGIVTDLPFG 395 (494)
Q Consensus 386 D~IVtNPPYG 395 (494)
|++|.|.-.+
T Consensus 74 d~lv~~Ag~~ 83 (230)
T 3guy_A 74 STVVHSAGSG 83 (230)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEeCCcC
Confidence 9999987643
No 447
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=43.06 E-value=1.7e+02 Score=26.74 Aligned_cols=78 Identities=9% Similarity=0.109 Sum_probs=47.9
Q ss_pred CCEEEEEcCCcChHHHHHHhcC-----CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-------
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY-----PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC------- 379 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~-----~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~------- 379 (494)
+.++|=.| |+|.|+.+.+..+ .+..|++.+.++..++.+...+..... ...+.++.+|+.+..
T Consensus 6 ~k~~lVTG-as~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dv~~~~~v~~~~~ 80 (259)
T 1oaa_A 6 CAVCVLTG-ASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP----DLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp SEEEEESS-CSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT----TSEEEEEECCTTSHHHHHHHHH
T ss_pred CcEEEEeC-CCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC----CCeEEEEecCCCCHHHHHHHHH
Confidence 33455444 5666766665432 478999999999888777666653210 123567777876531
Q ss_pred -C----CCCCee--EEEEcCCC
Q psy19 380 -F----KPACVD--GIVTDLPF 394 (494)
Q Consensus 380 -~----~~~~~D--~IVtNPPY 394 (494)
. ..+.+| ++|.|--+
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCC
T ss_pred HHHhccccccCCccEEEECCcc
Confidence 0 113567 99988653
No 448
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=42.72 E-value=40 Score=33.19 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=25.4
Q ss_pred hCCCCC-CEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCH
Q psy19 307 ASPIPG-DVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINE 345 (494)
Q Consensus 307 a~~~~g-~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~ 345 (494)
+++++| ++||=.|+ |.|.+++.+|+.. ++.++++..++
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~ 202 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDR 202 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCC
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCc
Confidence 467889 99998776 3455566666543 57777776443
No 449
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=42.65 E-value=1.4e+02 Score=27.22 Aligned_cols=76 Identities=13% Similarity=0.018 Sum_probs=49.1
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~--- 381 (494)
+.++|=.|+ +|.|+.+.+..+ .+..|+..+.++..++.+...+...+ ..+.++.+|+.+.. . .
T Consensus 7 ~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 7 GKVALITGA-SSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG------AKVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHHHH
Confidence 456666664 566766655432 36789999999988877766665433 23567778876541 0 0
Q ss_pred --CCCeeEEEEcCCC
Q psy19 382 --PACVDGIVTDLPF 394 (494)
Q Consensus 382 --~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 80 ~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 80 EALGGLDILVNNAGI 94 (247)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1478999998654
No 450
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=42.50 E-value=1.6e+02 Score=27.41 Aligned_cols=113 Identities=15% Similarity=0.066 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-CHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~- 381 (494)
.+.++|=-|+ +|.|+.+.|..+ .+..|+..+. +....+.....+...+ ..+.++.+|+.+..- .
T Consensus 17 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~ 89 (270)
T 3is3_A 17 DGKVALVTGS-GRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG------SDAIAIKADIRQVPEIVKLFDQ 89 (270)
T ss_dssp TTCEEEESCT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHH
Confidence 3556776664 556666555432 3678887765 5666666666665443 235677888776420 0
Q ss_pred ----CCCeeEEEEcCCCccccC----CccchHHHHH-------HHHHHHhhcccCCCcEEEEEec
Q psy19 382 ----PACVDGIVTDLPFGKRVG----SKSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG~r~~----~~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~ 431 (494)
-+.+|++|.|.-+..... ..++....+. .+.+.+...++++ |+++++++
T Consensus 90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS 153 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSS 153 (270)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeC
Confidence 147899999865432111 1111111111 2445566677777 99888766
No 451
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=42.45 E-value=2.1e+02 Score=26.72 Aligned_cols=113 Identities=8% Similarity=0.012 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-CHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~- 381 (494)
.+.++|=.|++ |.|+.+.|..+ .+..|+..+. +....+.....+...+ ..+.++.+|+.+.. . .
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 102 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG------GRAVAIRADNRDAEAIEQAIRE 102 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHH
Confidence 45677777764 55665555432 3678888755 4555666555555433 23567788876642 0 0
Q ss_pred ----CCCeeEEEEcCCCccccC----CccchHHHHH-------HHHHHHhhcccCCCcEEEEEec
Q psy19 382 ----PACVDGIVTDLPFGKRVG----SKSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG~r~~----~~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~ 431 (494)
-+.+|++|.|--+..... ..++....+. .+++.+...++++ |+++++++
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS 166 (271)
T 3v2g_A 103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGS 166 (271)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeC
Confidence 147899999975432111 1111111111 2445566677777 88888755
No 452
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=42.11 E-value=1.3e+02 Score=30.64 Aligned_cols=95 Identities=14% Similarity=0.033 Sum_probs=54.5
Q ss_pred EEEEEcCCcChHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc----CCCCCeeE
Q psy19 314 VFLDPMCGGGTIPVECSLS--YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC----FKPACVDG 387 (494)
Q Consensus 314 ~VLDP~CGSGtilIEAA~~--~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~----~~~~~~D~ 387 (494)
.|+= ||.|.++..++.. -.+..++++|.|+..++.++. .|. .++.+|+.+.. ..-...|+
T Consensus 6 ~viI--iG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g~--------~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 6 RVII--AGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FGM--------KVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp SEEE--ECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TTC--------CCEESCTTCHHHHHHTTTTTCSE
T ss_pred eEEE--ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CCC--------eEEEcCCCCHHHHHhcCCCccCE
Confidence 3444 4556665555443 236789999999999888763 232 47788887652 11246787
Q ss_pred EEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 388 IVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 388 IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
||+=.| ....+ ..+-...+-+.|. .+++.-+.+..
T Consensus 72 viv~~~------~~~~n-----~~i~~~ar~~~p~-~~Iiara~~~~ 106 (413)
T 3l9w_A 72 LINAID------DPQTN-----LQLTEMVKEHFPH-LQIIARARDVD 106 (413)
T ss_dssp EEECCS------SHHHH-----HHHHHHHHHHCTT-CEEEEEESSHH
T ss_pred EEECCC------ChHHH-----HHHHHHHHHhCCC-CeEEEEECCHH
Confidence 777332 22111 1222345555565 66666666554
No 453
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=42.00 E-value=1.7e+02 Score=27.13 Aligned_cols=77 Identities=14% Similarity=0.028 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~-- 381 (494)
.+.++|=.|+ +|.|+.+.+..+ .+..|+.++.++..++.+...+...+ ..+.++.+|+.+.. +.
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG------LNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEECCCCCHHHHHHHHHHH
Confidence 3556776664 566766655432 36789999999988776666665432 23467777876542 00
Q ss_pred ----CCCeeEEEEcCCC
Q psy19 382 ----PACVDGIVTDLPF 394 (494)
Q Consensus 382 ----~~~~D~IVtNPPY 394 (494)
.+.+|++|.|--+
T Consensus 93 ~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHTTSCCCEEEECCCC
T ss_pred HHHcCCCCcEEEECCCC
Confidence 1579999999754
No 454
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=41.82 E-value=29 Score=33.61 Aligned_cols=28 Identities=7% Similarity=-0.045 Sum_probs=20.7
Q ss_pred ceeeeeeccccc-cCCCCCeeEEEEcCCCc
Q psy19 367 KVSPLVCNVRQL-CFKPACVDGIVTDLPFG 395 (494)
Q Consensus 367 ~i~~~~~Da~~l-~~~~~~~D~IVtNPPYG 395 (494)
.+.+.+.|+.++ ... ..-|+|.+||||-
T Consensus 157 ~v~i~~~Df~~~i~~~-~~~~fvY~DPPY~ 185 (278)
T 2g1p_A 157 NAFFYCESYADSMARA-DDSSVVYCDPPYA 185 (278)
T ss_dssp GEEEEECCHHHHHTTC-CTTEEEEECCSCC
T ss_pred CcEEEeCCHHHHHHhc-CCCCEEEeCCccc
Confidence 357899999876 222 2458999999994
No 455
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=41.35 E-value=2.2e+02 Score=26.69 Aligned_cols=60 Identities=5% Similarity=-0.129 Sum_probs=38.6
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEe-CCHHHHHHHHHHHH-hccCCCCcccceeeeeeccccc
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGD-INEKLVLKTQANVL-HNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~D-id~~al~~Ar~Nl~-~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+.++|=.| |+|.|+.+.+..+ .++.|+.++ .++..++.+...+. ..+ ..+.++.+|+.+.
T Consensus 9 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 9 VPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP------NSAITVQADLSNV 72 (291)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST------TCEEEEECCCSSS
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC------CeeEEEEeecCCc
Confidence 44566555 4566776665542 367899999 99988877766664 222 2356777777654
No 456
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=41.35 E-value=1.3e+02 Score=28.04 Aligned_cols=114 Identities=12% Similarity=-0.020 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEE-eCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCG-DINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~-Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .+..|+.. ..+....+.....+...+ ..+.++.+|+.+..- .
T Consensus 26 ~~k~~lVTGa-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 26 TNKVAIVTGA-SRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG------GKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp -CCEEEEESC-SSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CeEEEEEcCCCCHHHHHHHHHH
Confidence 3566776665 455665555432 25677766 556666666666555443 235677788776420 0
Q ss_pred ----CCCeeEEEEcCCCccccC----CccchHHHH-------HHHHHHHhhcccCCCcEEEEEecC
Q psy19 382 ----PACVDGIVTDLPFGKRVG----SKSNNFLLY-------RLFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 382 ----~~~~D~IVtNPPYG~r~~----~~~~~~~ly-------~~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
-+.+|++|.|--+..... ..++....+ -.+++.+...++.+ |+++.+++.
T Consensus 99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~ 163 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTS 163 (267)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCT
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeCh
Confidence 147999999975432111 011111111 12445566667777 898888763
No 457
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=40.93 E-value=1.9e+02 Score=26.56 Aligned_cols=76 Identities=13% Similarity=0.033 Sum_probs=49.1
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~--- 381 (494)
+.++|=.|+ +|.|+.+.+..+ .+..|++++.++..++.+...+...+ ..+.++.+|+.+.. +.
T Consensus 9 ~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 9 GCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG------FKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 456776554 666766555432 36789999999988777666665432 23567778876541 00
Q ss_pred --C-CCeeEEEEcCCC
Q psy19 382 --P-ACVDGIVTDLPF 394 (494)
Q Consensus 382 --~-~~~D~IVtNPPY 394 (494)
- +.+|++|.|--.
T Consensus 82 ~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 82 NHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHTTTCCCEEEECCCC
T ss_pred HHcCCCCCEEEECCCC
Confidence 1 579999998654
No 458
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=40.81 E-value=69 Score=30.25 Aligned_cols=77 Identities=12% Similarity=0.043 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.+.++|=.| |+|.|+.+.|..+ .+++|+..|.++..++.+...+...+ ..+.++.+|+.+..-
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 32 RGRTALVTG-SSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG------GTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT------CCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------CeEEEEEecCCCHHHHHHHHHHH
Confidence 355666555 5566766655542 36789999999887777777666543 235677888766421
Q ss_pred -CCCCeeEEEEcCCC
Q psy19 381 -KPACVDGIVTDLPF 394 (494)
Q Consensus 381 -~~~~~D~IVtNPPY 394 (494)
..+.+|++|.|--.
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 105 EAIAPVDILVINASA 119 (275)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 01478999998754
No 459
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=40.66 E-value=1.6e+02 Score=27.59 Aligned_cols=74 Identities=15% Similarity=0.176 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~-- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .+..|+.+|.++..++.+...+ + ..+.++.+|+.+..- .
T Consensus 28 ~gk~vlVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~------~~~~~~~~Dv~d~~~v~~~~~~~ 97 (277)
T 3gvc_A 28 AGKVAIVTGA-GAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G------CGAAACRVDVSDEQQIIAMVDAC 97 (277)
T ss_dssp TTCEEEETTT-TSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C------SSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C------CcceEEEecCCCHHHHHHHHHHH
Confidence 3556666665 455655554432 3689999999998777665544 2 124567778766420 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 98 ~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 98 VAAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1478999998654
No 460
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.41 E-value=1e+02 Score=29.41 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
.+.++|=.| |+|.|+.+.+..+ .+..|+..+.++..++.+...+...+. ....+.++.+|+.+.. . .
T Consensus 25 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 25 SGKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV---PAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---CCceEEEEecCCCCHHHHHHHHHHH
Confidence 345666555 5666776665432 367899999999888777666654321 0114567788876542 0 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 101 ~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 1368999999754
No 461
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=40.35 E-value=1.8e+02 Score=27.06 Aligned_cols=77 Identities=16% Similarity=0.056 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-------------CHHHHHHHHHHHHhccCCCCcccceeeeeecc
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-------------NEKLVLKTQANVLHNSGNLNRELKVSPLVCNV 375 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-------------d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da 375 (494)
.+.++|=.|+ +|.|+.+.|..+ .++.|+.+|. ++..++.+...+...+ ..+.++.+|+
T Consensus 14 ~gk~~lVTGa-s~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv 86 (280)
T 3pgx_A 14 QGRVAFITGA-ARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG------RKALTRVLDV 86 (280)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT------CCEEEEECCT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC------CeEEEEEcCC
Confidence 4566776665 455666555432 3688999998 6777777776666443 2356777887
Q ss_pred cccc-C----C-----CCCeeEEEEcCCC
Q psy19 376 RQLC-F----K-----PACVDGIVTDLPF 394 (494)
Q Consensus 376 ~~l~-~----~-----~~~~D~IVtNPPY 394 (494)
.+.. . . -+.+|++|.|--+
T Consensus 87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 87 RDDAALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6542 0 0 1478999999654
No 462
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=40.34 E-value=49 Score=32.13 Aligned_cols=100 Identities=15% Similarity=0.084 Sum_probs=58.7
Q ss_pred HhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccc-c-c-C
Q psy19 306 LASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQ-L-C-F 380 (494)
Q Consensus 306 la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~-l-~-~ 380 (494)
.++++++++||-.|+ |.|..++..+... +++|+++|.+++.++.++. .|.. ..+.....|..+ + . .
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~g~~----~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARK----LGCH----HTINYSTQDFAEVVREIT 210 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC----EEEECCCHHHHHHHHHHh
Confidence 456788999998885 4555555555543 6799999999988877754 2221 001111111110 1 0 1
Q ss_pred CCCCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 381 KPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 381 ~~~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
....+|+||-+-. . . .+..+.+.|+++ |+++++.
T Consensus 211 ~~~~~d~vi~~~g------~-~--------~~~~~~~~l~~~-G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSIG------K-D--------TLQKSLDCLRPR-GMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECSC------T-T--------THHHHHHTEEEE-EEEEECC
T ss_pred CCCCCeEEEECCc------H-H--------HHHHHHHhhccC-CEEEEEe
Confidence 1236999987542 1 1 122567789998 9888764
No 463
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=40.17 E-value=1.1e+02 Score=28.25 Aligned_cols=76 Identities=16% Similarity=0.087 Sum_probs=48.4
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEE-eCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCG-DINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~-Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
+.++|=-| |+|.|+.+.+..+ .++.++.. +.++..++.+...+...+ ..+.++.+|+.+.. . .
T Consensus 4 ~k~vlVTG-as~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 76 (258)
T 3oid_A 4 NKCALVTG-SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG------VKVLVVKANVGQPAKIKEMFQQI 76 (258)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEec-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHH
Confidence 44555545 5566766665442 36777775 888888777777666433 24567888877642 0 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--.
T Consensus 77 ~~~~g~id~lv~nAg~ 92 (258)
T 3oid_A 77 DETFGRLDVFVNNAAS 92 (258)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1468999999743
No 464
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=39.94 E-value=1.1e+02 Score=28.46 Aligned_cols=114 Identities=11% Similarity=0.047 Sum_probs=64.0
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC---CHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI---NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF----- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di---d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~----- 380 (494)
.+.++|=.|+ +|.|+.+.|..+ .++.|+..+. +...++.+...+...+ ..+.++.+|+.+..-
T Consensus 10 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~ 82 (262)
T 3ksu_A 10 KNKVIVIAGG-IKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG------AKVALYQSDLSNEEEVAKLF 82 (262)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT------CEEEEEECCCCSHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHH
Confidence 3556776665 455776666542 3678888754 4555665555555332 345678888876420
Q ss_pred C-----CCCeeEEEEcCCCccccC----CccchHHHHH-------HHHHHHhhcccCCCcEEEEEecC
Q psy19 381 K-----PACVDGIVTDLPFGKRVG----SKSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTSD 432 (494)
Q Consensus 381 ~-----~~~~D~IVtNPPYG~r~~----~~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~~ 432 (494)
. -+.+|++|.|--...... ..++....+. .+++.+...++++ |+++++++.
T Consensus 83 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~isS~ 149 (262)
T 3ksu_A 83 DFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN-GHIITIATS 149 (262)
T ss_dssp HHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE-EEEEEECCC
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CEEEEEech
Confidence 0 147999999865432111 1111111111 2445566666676 888888764
No 465
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=39.83 E-value=2e+02 Score=26.47 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C-------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~------- 380 (494)
.+.++|=.| |+|.|+.+.+..+ .+.+|+..|.++..++.+...+. ..+.++.+|+.+.. .
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~ 76 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG---------PAAYAVQMDVTRQDSIDAAIAAT 76 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CCceEEEeeCCCHHHHHHHHHHH
Confidence 355677666 4566666655432 36789999999887766555442 12457777876542 0
Q ss_pred --CCCCeeEEEEcCCC
Q psy19 381 --KPACVDGIVTDLPF 394 (494)
Q Consensus 381 --~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|--+
T Consensus 77 ~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 77 VEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHSSSCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 01479999999754
No 466
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=39.50 E-value=1.4e+02 Score=28.02 Aligned_cols=73 Identities=8% Similarity=-0.045 Sum_probs=46.7
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~--- 381 (494)
+.++|=.| |+|.|+.+.|..+ .+..|+..|.+...++.+...+. ..+.++.+|+.+.. . .
T Consensus 28 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~~ 97 (272)
T 4dyv_A 28 KKIAIVTG-AGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---------DDALCVPTDVTDPDSVRALFTATV 97 (272)
T ss_dssp CCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---------SCCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------CCeEEEEecCCCHHHHHHHHHHHH
Confidence 45566544 5666766655442 36789999999887776655542 12457778876542 0 0
Q ss_pred --CCCeeEEEEcCCC
Q psy19 382 --PACVDGIVTDLPF 394 (494)
Q Consensus 382 --~~~~D~IVtNPPY 394 (494)
-+.+|++|.|.-+
T Consensus 98 ~~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 98 EKFGRVDVLFNNAGT 112 (272)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1479999999754
No 467
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.42 E-value=48 Score=31.03 Aligned_cols=79 Identities=13% Similarity=0.078 Sum_probs=47.5
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~--- 381 (494)
+.++|=.| |+|.|+.+.+..+ .+..|++++.++..++.+...+..... ....+.++.+|+.+.. +.
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 6 EKVAIITG-SSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV---SEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc---CCCceeEEecccCCHHHHHHHHHHHH
Confidence 44555544 4566766655432 367899999999887776666532110 1224567778876542 00
Q ss_pred --CCCeeEEEEcCCC
Q psy19 382 --PACVDGIVTDLPF 394 (494)
Q Consensus 382 --~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 82 ~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 82 GKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHSCCCEEEECCC-
T ss_pred HHcCCCCEEEECCCC
Confidence 1378999998643
No 468
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=38.79 E-value=2.2e+02 Score=26.11 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=47.8
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----C----
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----F---- 380 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~---- 380 (494)
+.++|=.| |+|.|+.+.+..+ .+..|+..+.++..++.+...+...+ ..+.++.+|+.+.. +
T Consensus 5 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 5 GQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG------GQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS------SEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC------CceEEEECCCCCHHHHHHHHHHHH
Confidence 44566555 5666776665432 36789999999988777666665432 23567777876531 0
Q ss_pred -C-CCCeeEEEEcC
Q psy19 381 -K-PACVDGIVTDL 392 (494)
Q Consensus 381 -~-~~~~D~IVtNP 392 (494)
. .+.+|++|.|-
T Consensus 78 ~~~~g~id~lvnnA 91 (260)
T 2qq5_A 78 REQQGRLDVLVNNA 91 (260)
T ss_dssp HHHTTCCCEEEECC
T ss_pred HhcCCCceEEEECC
Confidence 0 25789999997
No 469
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=38.65 E-value=2.1e+02 Score=26.61 Aligned_cols=78 Identities=14% Similarity=0.072 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-------------CHHHHHHHHHHHHhccCCCCcccceeeeeecc
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-------------NEKLVLKTQANVLHNSGNLNRELKVSPLVCNV 375 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-------------d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da 375 (494)
.+.++|=.|+ +|.|+.+.|..+ .++.|+.+|. ++..++.+...+...+ ..+.++.+|+
T Consensus 10 ~~k~~lVTGa-s~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~ 82 (277)
T 3tsc_A 10 EGRVAFITGA-ARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN------RRIVAAVVDT 82 (277)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT------CCEEEEECCT
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC------CeEEEEECCC
Confidence 4566776665 455665555432 3688999998 6777777666665443 2356777887
Q ss_pred cccc-C----C-----CCCeeEEEEcCCCc
Q psy19 376 RQLC-F----K-----PACVDGIVTDLPFG 395 (494)
Q Consensus 376 ~~l~-~----~-----~~~~D~IVtNPPYG 395 (494)
.+.. . . -+.+|++|.|--+.
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 83 RDFDRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 6642 0 0 14689999997543
No 470
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=38.60 E-value=1.7e+02 Score=27.14 Aligned_cols=112 Identities=15% Similarity=0.063 Sum_probs=60.5
Q ss_pred CCEEEEEcCC-cChHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C-------
Q psy19 312 GDVFLDPMCG-GGTIPVECSLS--YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F------- 380 (494)
Q Consensus 312 g~~VLDP~CG-SGtilIEAA~~--~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~------- 380 (494)
+.++|=.|++ +|.|+.+.+.. -.+..|+.++.++. .+.....+.... ..+.++.+|+.+.. .
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~------~~~~~~~~D~~~~~~v~~~~~~~ 78 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL------NSPYVYELDVSKEEHFKSLYNSV 78 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT------TCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc------CCcEEEEcCCCCHHHHHHHHHHH
Confidence 5577777775 37777666554 23678999998875 222222232211 01356777776531 0
Q ss_pred --CCCCeeEEEEcCCCccc------c--CCccchHHHH-------HHHHHHHhhcccCCCcEEEEEec
Q psy19 381 --KPACVDGIVTDLPFGKR------V--GSKSNNFLLY-------RLFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 381 --~~~~~D~IVtNPPYG~r------~--~~~~~~~~ly-------~~fL~~l~rvLkpg~G~lvllt~ 431 (494)
.-+.+|++|.|--+... + ....+....+ -.+++.+...++++ |+++.+++
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS 145 (275)
T 2pd4_A 79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG-ASVLTLSY 145 (275)
T ss_dssp HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEEEC
T ss_pred HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CEEEEEec
Confidence 01478999999754321 1 0111111111 12345556666666 89888876
No 471
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=38.52 E-value=2.3e+02 Score=25.88 Aligned_cols=80 Identities=10% Similarity=-0.003 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.+.++|=-|+ +|.|+.+.|..+ .+..|+.++.++..++.+...+...+. + ...+.++.+|+.+..-
T Consensus 6 ~~k~~lVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~-~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 6 QKGLAIITGA-SQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK--H-VQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCCEEEEEST-TSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT--T-SCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc--c-cCcceEEeccCCCHHHHHHHHHHH
Confidence 3456666665 455665555432 267899999999988888777765421 0 1235677888776420
Q ss_pred --CCCCeeEEEEcCCC
Q psy19 381 --KPACVDGIVTDLPF 394 (494)
Q Consensus 381 --~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|.-+
T Consensus 82 ~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHCCEEEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 01479999999754
No 472
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=38.32 E-value=2.3e+02 Score=26.45 Aligned_cols=77 Identities=13% Similarity=0.010 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-CHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .+..|+..|. ++..++.....+...+ ..+.++.+|+.+..- .
T Consensus 28 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 28 ARPVAIVTGG-RRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG------ARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT------CCEEEEECCTTSGGGHHHHHHH
T ss_pred CCCEEEEecC-CCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHH
Confidence 4566776665 455665555432 3678999885 7777777776666443 245678888876521 0
Q ss_pred ----CCCeeEEEEcCCC
Q psy19 382 ----PACVDGIVTDLPF 394 (494)
Q Consensus 382 ----~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 101 ~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHSCCCEEEEECC-
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1378999999754
No 473
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=37.98 E-value=2.1e+02 Score=26.71 Aligned_cols=75 Identities=19% Similarity=0.223 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~-- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .+..|+..|.++..++.....+ + ..+.++.+|+.+.. +.
T Consensus 26 ~~k~vlVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 26 NQRVCIVTGG-GSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---G------SKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C------CceEEEEecCCCHHHHHHHHHHH
Confidence 3556776665 555666555432 3678999999988766554432 1 23456777876542 00
Q ss_pred ---CCCeeEEEEcCCCc
Q psy19 382 ---PACVDGIVTDLPFG 395 (494)
Q Consensus 382 ---~~~~D~IVtNPPYG 395 (494)
-+.+|++|.|--+.
T Consensus 96 ~~~~g~iD~lv~nAg~~ 112 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAGFG 112 (277)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 14789999997543
No 474
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=37.79 E-value=1.1e+02 Score=25.71 Aligned_cols=94 Identities=12% Similarity=0.119 Sum_probs=50.4
Q ss_pred CCcChHHHHHHhcC--CCCeEEEEeCC-HHHHHHHHHHHHhccCCCCcccceeeeeecccccc----CCCCCeeEEEEcC
Q psy19 320 CGGGTIPVECSLSY--PHTFFVCGDIN-EKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC----FKPACVDGIVTDL 392 (494)
Q Consensus 320 CGSGtilIEAA~~~--~~~~v~G~Did-~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~----~~~~~~D~IVtNP 392 (494)
||.|.++...+... .+..++.+|.+ ++.++....... .+ +.++.+|+.+.. ..-...|+||+-.
T Consensus 9 ~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~~--------~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 9 CGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DN--------ADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TT--------CEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-CC--------CeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 46677776655432 35789999998 454444333221 11 357778876431 1124678888733
Q ss_pred CCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEecCHH
Q psy19 393 PFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRK 434 (494)
Q Consensus 393 PYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt~~~~ 434 (494)
| .... ...+....+-+.|. .+++..+.+..
T Consensus 80 ~------~d~~-----n~~~~~~a~~~~~~-~~ii~~~~~~~ 109 (153)
T 1id1_A 80 D------NDAD-----NAFVVLSAKDMSSD-VKTVLAVSDSK 109 (153)
T ss_dssp S------CHHH-----HHHHHHHHHHHTSS-SCEEEECSSGG
T ss_pred C------ChHH-----HHHHHHHHHHHCCC-CEEEEEECCHH
Confidence 2 2111 12223455555565 66766666654
No 475
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=37.58 E-value=1.4e+02 Score=28.04 Aligned_cols=76 Identities=12% Similarity=0.138 Sum_probs=44.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc----CC---
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC----FK--- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~----~~--- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .++.|+..|.++.. +.....+...+ ..+.++.+|+.+.. +.
T Consensus 30 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 101 (273)
T 3uf0_A 30 AGRTAVVTGA-GSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGG------GSAEAVVADLADLEGAANVAEEL 101 (273)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSTHH-HHHHHHHHTTT------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHHH
Confidence 4567776665 455665555432 36789888865443 33333343222 24567778876642 10
Q ss_pred --CCCeeEEEEcCCC
Q psy19 382 --PACVDGIVTDLPF 394 (494)
Q Consensus 382 --~~~~D~IVtNPPY 394 (494)
.+.+|++|.|--.
T Consensus 102 ~~~g~iD~lv~nAg~ 116 (273)
T 3uf0_A 102 AATRRVDVLVNNAGI 116 (273)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCcEEEECCCC
Confidence 1478999999654
No 476
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=37.49 E-value=27 Score=34.96 Aligned_cols=57 Identities=16% Similarity=0.058 Sum_probs=38.5
Q ss_pred chHHHHHHHHHHhCCCCCCEEEEEcCCcChHHHHH---HhcCCCCeEEEEeCCHHHHHHHHH
Q psy19 295 LKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVEC---SLSYPHTFFVCGDINEKLVLKTQA 353 (494)
Q Consensus 295 L~e~lAa~ll~la~~~~g~~VLDP~CGSGtilIEA---A~~~~~~~v~G~Did~~al~~Ar~ 353 (494)
+.+..|..++..+. ++|++||=.++|+|.++..+ |+.. +++|++++.+++-++.+++
T Consensus 155 ~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~-Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 155 VNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKD-GIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHH-TCCEEEEESSHHHHHHHHH
T ss_pred hhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHh
Confidence 33334455555555 67888888766766665544 4332 6789999999998888764
No 477
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=36.76 E-value=28 Score=33.32 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=56.6
Q ss_pred HhCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeee-eccccccCCC
Q psy19 306 LASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLV-CNVRQLCFKP 382 (494)
Q Consensus 306 la~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~-~Da~~l~~~~ 382 (494)
.+ +++|++||-.|+ |.|.+++.+|... +++|+++|.+++.++.+++ .|. ...+.... .|+.+ ..
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga----~~~~~~~~~~~~~~-~~-- 187 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA----LGA----EEAATYAEVPERAK-AW-- 187 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH----TTC----SEEEEGGGHHHHHH-HT--
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCC----CEEEECCcchhHHH-Hh--
Confidence 44 789999999987 3456666666554 6799999999887776643 232 11111111 12111 11
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEEe
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLT 430 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvllt 430 (494)
..+|+|+- - |.. . + ..+.+.|+++ |+++++.
T Consensus 188 ~~~d~vid-~--g~~-----~----~----~~~~~~l~~~-G~~v~~g 218 (302)
T 1iz0_A 188 GGLDLVLE-V--RGK-----E----V----EESLGLLAHG-GRLVYIG 218 (302)
T ss_dssp TSEEEEEE-C--SCT-----T----H----HHHHTTEEEE-EEEEEC-
T ss_pred cCceEEEE-C--CHH-----H----H----HHHHHhhccC-CEEEEEe
Confidence 46898875 3 211 1 2 2467788998 8887653
No 478
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=36.74 E-value=2.1e+02 Score=26.67 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=44.4
Q ss_pred CCCEEEEEcCCc-ChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----C--
Q psy19 311 PGDVFLDPMCGG-GTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----F-- 380 (494)
Q Consensus 311 ~g~~VLDP~CGS-GtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~-- 380 (494)
.+.++|=.|+++ |.|+.+.+..+ .+..|+.++.++. .+.....+.... ..+.++.+|+.+.. +
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~------~~~~~~~~Dl~~~~~v~~~~~~ 92 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF------GSDLVVKCDVSLDEDIKNLKKF 92 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT------TCCCEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc------CCeEEEEcCCCCHHHHHHHHHH
Confidence 356788777653 67776665432 3678999998875 222222232211 01356777776531 0
Q ss_pred ---CCCCeeEEEEcCCC
Q psy19 381 ---KPACVDGIVTDLPF 394 (494)
Q Consensus 381 ---~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|--+
T Consensus 93 ~~~~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 93 LEENWGSLDIIVHSIAY 109 (285)
T ss_dssp HHHHTSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 01478999999754
No 479
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=36.42 E-value=2.4e+02 Score=25.41 Aligned_cols=77 Identities=16% Similarity=0.124 Sum_probs=50.7
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C--------
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F-------- 380 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~-------- 380 (494)
+.++|=.| |+|.|+.+.+..+ .+.+|++.+.++..++.....+...+ ..+.++.+|+.+.. .
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG------FKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEecCCCHHHHHHHHHHHH
Confidence 44555555 5666766555432 36889999999998888777776543 23567778876542 0
Q ss_pred -CCCCeeEEEEcCCCc
Q psy19 381 -KPACVDGIVTDLPFG 395 (494)
Q Consensus 381 -~~~~~D~IVtNPPYG 395 (494)
..+.+|++|.|.-+.
T Consensus 78 ~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 78 AENLAIDILVNNAGIT 93 (247)
T ss_dssp HTTCCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 124689999997543
No 480
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=35.91 E-value=52 Score=31.58 Aligned_cols=78 Identities=9% Similarity=-0.023 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC--------
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-------- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-------- 380 (494)
.+.++|=.| |+|.|+.+.|..+ .++.|+..|.++..++.+...+...+ ...+.++.+|+.+..-
T Consensus 40 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 40 SARSVLVTG-GTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-----AGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-----SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-----CCcEEEEEEeCCCHHHHHHHHHHH
Confidence 345666555 4566766655432 36789999999888777777666433 1345678888876420
Q ss_pred --CCCCeeEEEEcCCC
Q psy19 381 --KPACVDGIVTDLPF 394 (494)
Q Consensus 381 --~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|--.
T Consensus 114 ~~~~g~iD~lvnnAg~ 129 (293)
T 3rih_A 114 VDAFGALDVVCANAGI 129 (293)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 01478999998643
No 481
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=35.81 E-value=2.5e+02 Score=27.00 Aligned_cols=60 Identities=5% Similarity=-0.129 Sum_probs=38.5
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEe-CCHHHHHHHHHHHH-hccCCCCcccceeeeeeccccc
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGD-INEKLVLKTQANVL-HNSGNLNRELKVSPLVCNVRQL 378 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~D-id~~al~~Ar~Nl~-~~g~~~~~~~~i~~~~~Da~~l 378 (494)
+.++|=.| |+|.|+.+.+..+ .++.|+.++ .++..++.+...+. ..+ ..+.++.+|+.+.
T Consensus 46 ~k~~lVTG-as~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~d~ 109 (328)
T 2qhx_A 46 VPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP------NSAITVQADLSNV 109 (328)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST------TCEEEEECCCSSS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC------CeEEEEEeeCCCc
Confidence 45566444 5667776665542 367899999 99988777766654 222 2356777777654
No 482
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=35.45 E-value=1e+02 Score=29.04 Aligned_cols=71 Identities=15% Similarity=0.025 Sum_probs=42.9
Q ss_pred CEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC----------
Q psy19 313 DVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF---------- 380 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~---------- 380 (494)
.+||=-|+++ .|+.+.|..+ .++.|+..|++++.++...+. + ..+..+++|+.+..-
T Consensus 3 K~vlVTGas~-GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----~------~~~~~~~~Dv~~~~~v~~~v~~~~~ 71 (247)
T 3ged_A 3 RGVIVTGGGH-GIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----R------PNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----C------TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEecCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c------CCEEEEEecCCCHHHHHHHHHHHHH
Confidence 3556555554 4655555432 378999999998766543321 1 234567788765410
Q ss_pred CCCCeeEEEEcCCC
Q psy19 381 KPACVDGIVTDLPF 394 (494)
Q Consensus 381 ~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|--.
T Consensus 72 ~~g~iDiLVNNAG~ 85 (247)
T 3ged_A 72 KLQRIDVLVNNACR 85 (247)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 01579999998743
No 483
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=35.39 E-value=67 Score=29.98 Aligned_cols=111 Identities=13% Similarity=0.043 Sum_probs=61.6
Q ss_pred CCCEEEEEcC-CcChHHHHHHhcC--CCCeEEEEeCCHHH-HHHHHHHHHhccCCCCcccceeeeeecccccc-----CC
Q psy19 311 PGDVFLDPMC-GGGTIPVECSLSY--PHTFFVCGDINEKL-VLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK 381 (494)
Q Consensus 311 ~g~~VLDP~C-GSGtilIEAA~~~--~~~~v~G~Did~~a-l~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~ 381 (494)
.+.++|=.|+ |+|.|+.+.+..+ .+..|+..+.++.. ++... ... ...+.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~------~~~~~~~~~Dv~~~~~v~~~~~ 76 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---DRL------PAKAPLLELDVQNEEHLASLAG 76 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---TTS------SSCCCEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH---Hhc------CCCceEEEccCCCHHHHHHHHH
Confidence 3567787787 4788877766542 36789999988643 22221 111 123456777876542 00
Q ss_pred -----CC---CeeEEEEcCCCccc-------cC--CccchHHHHH-------HHHHHHhhcccCCCcEEEEEec
Q psy19 382 -----PA---CVDGIVTDLPFGKR-------VG--SKSNNFLLYR-------LFLIEIGKIVRPQIGRAILLTS 431 (494)
Q Consensus 382 -----~~---~~D~IVtNPPYG~r-------~~--~~~~~~~ly~-------~fL~~l~rvLkpg~G~lvllt~ 431 (494)
-+ .+|++|.|--.... +. ..++....+. .+.+.+...++++ |+++.+++
T Consensus 77 ~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~iss 149 (269)
T 2h7i_A 77 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG-GSIVGMDF 149 (269)
T ss_dssp HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEEEC
T ss_pred HHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC-CeEEEEcC
Confidence 12 79999998643221 10 1111111111 2455666667777 88888764
No 484
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=34.93 E-value=2.7e+02 Score=26.60 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCC------------HHHHHHHHHHHHhccCCCCcccceeeeeeccc
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDIN------------EKLVLKTQANVLHNSGNLNRELKVSPLVCNVR 376 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did------------~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~ 376 (494)
.+.++|=-|+ +|.|+.+.|..+ .++.|+.+|.+ +..++.+...+...+ ..+.++.+|+.
T Consensus 45 ~gk~~lVTGa-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~ 117 (317)
T 3oec_A 45 QGKVAFITGA-ARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG------RRIIARQADVR 117 (317)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT------CCEEEEECCTT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC------CeEEEEECCCC
Confidence 3556666665 555665555432 36889999886 666666666555443 23567788876
Q ss_pred ccc-C----C-----CCCeeEEEEcCCC
Q psy19 377 QLC-F----K-----PACVDGIVTDLPF 394 (494)
Q Consensus 377 ~l~-~----~-----~~~~D~IVtNPPY 394 (494)
+.. . . -+.+|++|.|--+
T Consensus 118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 118 DLASLQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 642 0 0 1478999999654
No 485
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=34.32 E-value=1.5e+02 Score=27.95 Aligned_cols=76 Identities=11% Similarity=0.087 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~-- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .+..|+.+|.++..++.+...+...+ ..+.++.+|+.+... .
T Consensus 7 ~gk~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 7 EGKIAIVTGA-SSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG------GEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT------CCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHHH
Confidence 3456665554 555666555432 36889999999998887777665332 245677788765420 0
Q ss_pred ---CCCeeEEEEcCC
Q psy19 382 ---PACVDGIVTDLP 393 (494)
Q Consensus 382 ---~~~~D~IVtNPP 393 (494)
-+.+|++|.|--
T Consensus 80 ~~~~g~iD~lvnnAg 94 (280)
T 3tox_A 80 VRRFGGLDTAFNNAG 94 (280)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 147899999975
No 486
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=34.16 E-value=1.6e+02 Score=26.96 Aligned_cols=73 Identities=16% Similarity=0.132 Sum_probs=44.6
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~--- 381 (494)
+.++|=.| |+|.|+.+.+..+ .+..|+..+.++..++.....+ + ..+.++.+|+.+.. . .
T Consensus 6 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------~~~~~~~~D~~~~~~v~~~~~~~~ 75 (253)
T 1hxh_A 6 GKVALVTG-GASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G------ERSMFVRHDVSSEADWTLVMAAVQ 75 (253)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C------TTEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C------CceEEEEccCCCHHHHHHHHHHHH
Confidence 44555544 5666766655432 3678999999987766554433 1 12456777776531 0 0
Q ss_pred --CCCeeEEEEcCCC
Q psy19 382 --PACVDGIVTDLPF 394 (494)
Q Consensus 382 --~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 76 ~~~g~id~lv~~Ag~ 90 (253)
T 1hxh_A 76 RRLGTLNVLVNNAGI 90 (253)
T ss_dssp HHHCSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1368999998754
No 487
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=33.51 E-value=2.2e+02 Score=26.01 Aligned_cols=74 Identities=15% Similarity=0.060 Sum_probs=46.9
Q ss_pred EEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C---------C
Q psy19 314 VFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F---------K 381 (494)
Q Consensus 314 ~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~---------~ 381 (494)
++|=.| |+|.|+.+.+..+ .+..|++.+.++..++.....+...+ ..+.++.+|+.+.. . .
T Consensus 4 ~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 4 VALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG------GHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 455445 4666766655432 36789999999987776666665432 23466777876542 0 0
Q ss_pred CCCeeEEEEcCCC
Q psy19 382 PACVDGIVTDLPF 394 (494)
Q Consensus 382 ~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 77 ~g~id~lv~nAg~ 89 (256)
T 1geg_A 77 LGGFDVIVNNAGV 89 (256)
T ss_dssp TTCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 1478999998743
No 488
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=33.36 E-value=2.8e+02 Score=25.27 Aligned_cols=78 Identities=12% Similarity=0.139 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecc--cccc-----C-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNV--RQLC-----F- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da--~~l~-----~- 380 (494)
.+.++|=.|+ +|.|+.+.|..+ .+.+|+.+|.++..++.+...+...+. ..+.++..|+ .+.. +
T Consensus 11 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 11 NDRIILVTGA-SDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-----RQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----CCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----CCceEEEEecccCCHHHHHHHHH
Confidence 3556776664 556666555432 367899999999888877776654331 1245667776 3321 0
Q ss_pred ----CCCCeeEEEEcCCC
Q psy19 381 ----KPACVDGIVTDLPF 394 (494)
Q Consensus 381 ----~~~~~D~IVtNPPY 394 (494)
.-+.+|++|.|.-+
T Consensus 85 ~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHCSCCSEEEECCCC
T ss_pred HHHHhCCCCCEEEECCcc
Confidence 11478999998754
No 489
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=33.17 E-value=2.5e+02 Score=25.54 Aligned_cols=74 Identities=15% Similarity=-0.004 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~-- 381 (494)
.+.++|=.|+ +|.|+.+.|..+ .++.|++.|.++..++.....+.. ...++.+|+.+.. +.
T Consensus 8 ~gk~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~Dv~d~~~v~~~~~~~ 77 (248)
T 3op4_A 8 EGKVALVTGA-SRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---------NGKGMALNVTNPESIEAVLKAI 77 (248)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---------GEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---------cceEEEEeCCCHHHHHHHHHHH
Confidence 3456665554 566666655432 378899999999877766555432 2346667776542 00
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|.-+
T Consensus 78 ~~~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 78 TDEFGGVDILVNNAGI 93 (248)
T ss_dssp HHHHCCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1478999999654
No 490
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.57 E-value=2e+02 Score=26.83 Aligned_cols=79 Identities=11% Similarity=0.079 Sum_probs=49.5
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~--- 381 (494)
+.++|=.| |+|.|+.+.+..+ .+..|++++.++..++.+...+...+. ....+.++.+|+.+.. +.
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 6 NKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV---SEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC---CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCcceEEEEecCCCHHHHHHHHHHHH
Confidence 44565555 5666766655432 367899999999887777666653321 0114567788877642 00
Q ss_pred --CCCeeEEEEcCCC
Q psy19 382 --PACVDGIVTDLPF 394 (494)
Q Consensus 382 --~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 82 ~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 1368999998643
No 491
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=32.09 E-value=1.9e+02 Score=26.95 Aligned_cols=77 Identities=10% Similarity=-0.030 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-CHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~- 381 (494)
.+.++|=-| |+|.|+.+.|..+ .++.|+..+. +...++.....+...+ ..+.++.+|+.+..- .
T Consensus 27 ~~k~vlVTG-as~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~d~~~v~~~~~~ 99 (269)
T 4dmm_A 27 TDRIALVTG-ASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG------GEAFAVKADVSQESEVEALFAA 99 (269)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHH
Confidence 345666555 5566766655432 3678888887 7777776666665443 235677888876420 0
Q ss_pred ----CCCeeEEEEcCCC
Q psy19 382 ----PACVDGIVTDLPF 394 (494)
Q Consensus 382 ----~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 100 ~~~~~g~id~lv~nAg~ 116 (269)
T 4dmm_A 100 VIERWGRLDVLVNNAGI 116 (269)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1478999999754
No 492
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=31.92 E-value=2.7e+02 Score=25.86 Aligned_cols=77 Identities=14% Similarity=0.037 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLS--YPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~--~~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~-- 381 (494)
.+.++|=.|+ +|.|+.+.+.. -.+++|+..+.+...++.+...+.... ...+.++.+|+.+.. +.
T Consensus 26 ~~k~~lVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 26 RDKVAFITGG-GSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-----GRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-----SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4567777665 45566655543 236789999999887776666554321 124567788876641 00
Q ss_pred ---CCCeeEEEEcCC
Q psy19 382 ---PACVDGIVTDLP 393 (494)
Q Consensus 382 ---~~~~D~IVtNPP 393 (494)
-+.+|++|.|.-
T Consensus 100 ~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 100 LKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 147899999974
No 493
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=31.86 E-value=3.6e+02 Score=26.09 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=63.4
Q ss_pred CEEEEEcCCcChHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC---------CC
Q psy19 313 DVFLDPMCGGGTIPVECSLSYP-HTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF---------KP 382 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~~-~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~---------~~ 382 (494)
..|+++|||-=|...... |+ +..++=+| .|..++..++-+...+. ....+..++.+|+++ .+ ..
T Consensus 104 ~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~--~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGV--TPTADRREVPIDLRQ-DWPPALRSAGFDP 177 (310)
T ss_dssp CEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTC--CCSSEEEEEECCTTS-CHHHHHHHTTCCT
T ss_pred CeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCC--CCCCCeEEEecchHh-hHHHHHHhccCCC
Confidence 469999999999854432 44 47888899 69999999988875542 123445678888775 21 11
Q ss_pred CCeeEEEEcCCCccccCCccchHHHHHHHHHHHhhcccCCCcEEEEE
Q psy19 383 ACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILL 429 (494)
Q Consensus 383 ~~~D~IVtNPPYG~r~~~~~~~~~ly~~fL~~l~rvLkpg~G~lvll 429 (494)
...-++|+. |. +..-. .+--..+++.+...+.|| +.+++-
T Consensus 178 ~~Pt~~i~E---gv-l~Yl~--~~~~~~ll~~l~~~~~~g-s~l~~d 217 (310)
T 2uyo_A 178 SARTAWLAE---GL-LMYLP--ATAQDGLFTEIGGLSAVG-SRIAVE 217 (310)
T ss_dssp TSCEEEEEC---SC-GGGSC--HHHHHHHHHHHHHTCCTT-CEEEEE
T ss_pred CCCEEEEEe---ch-HhhCC--HHHHHHHHHHHHHhCCCC-eEEEEE
Confidence 223344441 10 00000 112345667788888888 877763
No 494
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=31.79 E-value=2e+02 Score=26.10 Aligned_cols=76 Identities=11% Similarity=-0.009 Sum_probs=45.8
Q ss_pred CEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-CHHHHHHHHHHHHhccCCCCcccceeeeeeccccccC-----C---
Q psy19 313 DVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF-----K--- 381 (494)
Q Consensus 313 ~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~-----~--- 381 (494)
.++|= --|+|.|+.+.+..+ .+..|+..+. ++...+.....+...+ ..+.++.+|+.+..- .
T Consensus 5 k~~lV-TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~ 77 (246)
T 3osu_A 5 KSALV-TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG------VDSFAIQANVADADEVKAMIKEVV 77 (246)
T ss_dssp CEEEE-TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEE-ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHHH
Confidence 34444 345666776665442 3678887776 5666666666665443 234677788765420 0
Q ss_pred --CCCeeEEEEcCCCc
Q psy19 382 --PACVDGIVTDLPFG 395 (494)
Q Consensus 382 --~~~~D~IVtNPPYG 395 (494)
-+.+|++|.|--+.
T Consensus 78 ~~~g~id~lv~nAg~~ 93 (246)
T 3osu_A 78 SQFGSLDVLVNNAGIT 93 (246)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 14789999997543
No 495
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.70 E-value=1.4e+02 Score=27.77 Aligned_cols=78 Identities=9% Similarity=-0.017 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-CHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----F-- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~-- 380 (494)
.+.++|=.|+ +|.|+.+.|..+ .+..|+..+. ++...+.....+...+ ..+.++.+|+.+.. +
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~ 100 (271)
T 4iin_A 28 TGKNVLITGA-SKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG------YKAAVIKFDAASESDFIEAIQT 100 (271)
T ss_dssp SCCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------CceEEEECCCCCHHHHHHHHHH
Confidence 3556665555 555666655432 3678888888 6666666666665443 24567788876542 0
Q ss_pred ---CCCCeeEEEEcCCCc
Q psy19 381 ---KPACVDGIVTDLPFG 395 (494)
Q Consensus 381 ---~~~~~D~IVtNPPYG 395 (494)
..+.+|++|.|.-+.
T Consensus 101 ~~~~~g~id~li~nAg~~ 118 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVV 118 (271)
T ss_dssp HHHHHSSCCEEEECCCCC
T ss_pred HHHhcCCCCEEEECCCcC
Confidence 014789999997543
No 496
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=31.57 E-value=1.7e+02 Score=27.48 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-C----C--
Q psy19 311 PGDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-F----K-- 381 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-~----~-- 381 (494)
.+.++|=.|+ +|.|+.+.+..+ .++.|+..+.++..++.....+...+ ..+.++.+|+.+.. . .
T Consensus 31 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 31 SGKRALITGA-STGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG------GKALPIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------CCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEEcCCCCHHHHHHHHHHH
Confidence 3556776665 456666555432 36789999999888877777666543 23467788876642 0 0
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|++|.|--+
T Consensus 104 ~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1378999998754
No 497
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=31.39 E-value=1.4e+02 Score=27.30 Aligned_cols=76 Identities=8% Similarity=0.032 Sum_probs=47.4
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeC-CHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC--
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDI-NEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK-- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Di-d~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~-- 381 (494)
+.++|=.| |+|.|+.+.+..+ .+..|++++. ++..++.....+...+ ..+.++.+|+.+.. +.
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 79 (261)
T 1gee_A 7 GKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG------GEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC------CceEEEECCCCCHHHHHHHHHHH
Confidence 44565444 5677776655432 3678999999 8877766666665432 23567778876542 00
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
-+.+|+||.|--+
T Consensus 80 ~~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 80 IKEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1368999998654
No 498
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=31.33 E-value=1.5e+02 Score=27.07 Aligned_cols=76 Identities=13% Similarity=0.083 Sum_probs=48.3
Q ss_pred CCEEEEEcCCcChHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHhccCCCCcccceeeeeecccccc-----CC---
Q psy19 312 GDVFLDPMCGGGTIPVECSLSY--PHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLC-----FK--- 381 (494)
Q Consensus 312 g~~VLDP~CGSGtilIEAA~~~--~~~~v~G~Did~~al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~-----~~--- 381 (494)
+.++|=. -|+|.|+.+.+..+ .+..|++++.++..++.....+...+ ..+.++.+|+.+.. +.
T Consensus 14 ~k~vlIT-GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 14 AKTVLVT-GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG------FQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp TCEEEET-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeeEEEECCCCCHHHHHHHHHHHH
Confidence 4456644 45677776665432 36789999999887777666665432 23566777876531 00
Q ss_pred ---CCCeeEEEEcCCC
Q psy19 382 ---PACVDGIVTDLPF 394 (494)
Q Consensus 382 ---~~~~D~IVtNPPY 394 (494)
.+.+|+||.|--+
T Consensus 87 ~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 87 SMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHTTCCSEEEEECCC
T ss_pred HHhCCCCcEEEECCCC
Confidence 1468999998643
No 499
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=31.32 E-value=1.7e+02 Score=27.48 Aligned_cols=114 Identities=8% Similarity=-0.053 Sum_probs=62.3
Q ss_pred CCCEEEEEcCCcChHHHHHHhc--CCCCeEEEEeCCHH-------HHHHHHHHHHhccCCCCcccceeeeeeccccccC-
Q psy19 311 PGDVFLDPMCGGGTIPVECSLS--YPHTFFVCGDINEK-------LVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCF- 380 (494)
Q Consensus 311 ~g~~VLDP~CGSGtilIEAA~~--~~~~~v~G~Did~~-------al~~Ar~Nl~~~g~~~~~~~~i~~~~~Da~~l~~- 380 (494)
.+.++|=.|++ |.|+.+.|.. -.+..|+.++.+.. .++.+...+...+ ..+.++.+|+.+..-
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v 80 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG------GQALPIVGDIRDGDAV 80 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT------SEEEEEECCTTSHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC------CcEEEEECCCCCHHHH
Confidence 35567766654 5566555543 23678999988865 3444445554333 245677888876420
Q ss_pred ----C-----CCCeeEEEEcCCCccccC----CccchHHHHH-------HHHHHHhhcccCC-CcEEEEEec
Q psy19 381 ----K-----PACVDGIVTDLPFGKRVG----SKSNNFLLYR-------LFLIEIGKIVRPQ-IGRAILLTS 431 (494)
Q Consensus 381 ----~-----~~~~D~IVtNPPYG~r~~----~~~~~~~ly~-------~fL~~l~rvLkpg-~G~lvllt~ 431 (494)
. -+.+|++|.|--+..... ..++....+. .+.+.+...++.. .|+++.+++
T Consensus 81 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 152 (285)
T 3sc4_A 81 AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP 152 (285)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 0 147899999975432111 1111111111 2445566666532 378887765
No 500
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=31.20 E-value=78 Score=32.35 Aligned_cols=46 Identities=20% Similarity=0.073 Sum_probs=34.3
Q ss_pred hCCCCCCEEEEEcC--CcChHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q psy19 307 ASPIPGDVFLDPMC--GGGTIPVECSLSYPHTFFVCGDINEKLVLKTQA 353 (494)
Q Consensus 307 a~~~~g~~VLDP~C--GSGtilIEAA~~~~~~~v~G~Did~~al~~Ar~ 353 (494)
++.++|++||=.|+ |.|.+++.+|+.. ++++++++.+++-++.++.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRA 271 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHh
Confidence 56789999998876 3455666666543 6889999999988887754
Done!