Query psy1901
Match_columns 205
No_of_seqs 194 out of 1165
Neff 7.2
Searched_HMMs 13730
Date Fri Aug 16 19:11:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1901.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1901hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pufa_ a.4.1.1 (A:) Homeobox 99.9 2.2E-22 1.6E-26 139.2 9.3 66 32-97 10-75 (77)
2 d2craa1 a.4.1.1 (A:7-64) Homeo 99.9 4.6E-23 3.3E-27 135.2 5.2 58 35-92 1-58 (58)
3 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 99.9 2E-22 1.5E-26 132.2 7.3 57 36-92 1-57 (58)
4 d1zq3p1 a.4.1.1 (P:2-68) Homeo 99.9 2.2E-22 1.6E-26 135.7 6.8 61 36-96 2-62 (67)
5 d2e1oa1 a.4.1.1 (A:8-64) Homeo 99.9 3.4E-22 2.5E-26 130.7 7.3 57 36-92 1-57 (57)
6 d1fjla_ a.4.1.1 (A:) Paired pr 99.9 4.7E-22 3.4E-26 133.3 8.0 63 34-96 1-63 (65)
7 d1jgga_ a.4.1.1 (A:) Even-skip 99.9 3.6E-22 2.6E-26 130.6 6.9 57 37-93 1-57 (57)
8 d9anta_ a.4.1.1 (A:) Antennape 99.9 3.5E-22 2.5E-26 130.0 6.6 55 39-93 1-55 (56)
9 d1b72a_ a.4.1.1 (A:) Homeobox 99.8 6.7E-22 4.9E-26 140.0 7.0 64 32-95 24-87 (88)
10 d2cuea1 a.4.1.1 (A:7-74) Paire 99.8 1.6E-21 1.2E-25 131.8 8.4 63 35-97 1-63 (68)
11 d1vnda_ a.4.1.1 (A:) VND/NK-2 99.8 2.6E-22 1.9E-26 138.9 3.5 63 32-94 6-68 (77)
12 d1p7ia_ a.4.1.1 (A:) Engrailed 99.8 1E-21 7.3E-26 126.6 5.8 53 37-89 1-53 (53)
13 d1ftta_ a.4.1.1 (A:) Thyroid t 99.8 1.6E-21 1.2E-25 131.7 6.7 61 35-95 2-62 (68)
14 d1yz8p1 a.4.1.1 (P:1-60) Pitui 99.8 1.6E-21 1.2E-25 128.7 5.2 58 36-93 2-59 (60)
15 d1uhsa_ a.4.1.1 (A:) Homeodoma 99.8 5.5E-21 4E-25 130.4 7.8 59 36-94 2-61 (72)
16 d1bw5a_ a.4.1.1 (A:) Insulin g 99.8 4.3E-21 3.2E-25 128.9 5.2 61 34-94 2-62 (66)
17 d1ocpa_ a.4.1.1 (A:) Oct-3 POU 99.8 3.1E-21 2.2E-25 130.0 4.4 61 33-93 6-66 (67)
18 d1au7a1 a.4.1.1 (A:103-160) Pi 99.8 7.7E-21 5.6E-25 124.6 5.5 57 37-93 1-57 (58)
19 d1le8a_ a.4.1.1 (A:) Mating ty 99.8 1.1E-20 7.8E-25 121.7 5.1 53 39-91 1-53 (53)
20 d2cufa1 a.4.1.1 (A:8-89) Homeo 99.8 2.6E-20 1.9E-24 130.3 7.0 60 36-95 1-75 (82)
21 d1e3oc1 a.4.1.1 (C:104-160) Oc 99.8 3.3E-20 2.4E-24 121.1 5.9 56 38-93 1-56 (57)
22 d1wi3a_ a.4.1.1 (A:) DNA-bindi 99.8 2.6E-20 1.9E-24 126.8 5.4 61 33-93 5-66 (71)
23 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 99.8 5.1E-20 3.7E-24 128.1 5.4 61 32-92 14-78 (80)
24 d2ecba1 a.4.1.1 (A:8-83) Zinc 99.8 1.9E-19 1.4E-23 124.1 4.8 55 42-96 11-65 (76)
25 d1pufb_ a.4.1.1 (B:) pbx1 {Hum 99.8 5.1E-19 3.7E-23 120.9 6.8 59 36-94 2-63 (73)
26 d1s7ea1 a.4.1.1 (A:103-152) He 99.8 2.5E-19 1.8E-23 113.8 4.5 50 38-87 1-50 (50)
27 d2ecca1 a.4.1.1 (A:1-76) Homeo 99.7 2.5E-18 1.8E-22 118.4 7.5 56 38-93 6-61 (76)
28 d1x2ma1 a.4.1.1 (A:8-59) Lag1 99.7 1.5E-18 1.1E-22 111.0 3.1 50 43-92 1-51 (52)
29 d1lfba_ a.4.1.1 (A:) Hepatocyt 99.7 2.1E-18 1.5E-22 119.1 3.5 56 39-94 1-77 (78)
30 d1x2na1 a.4.1.1 (A:6-67) Homeo 99.7 1.8E-17 1.3E-21 109.6 7.3 56 36-91 3-61 (62)
31 d2cqxa1 a.4.1.1 (A:8-66) LAG1 99.7 6.7E-18 4.9E-22 110.6 3.7 55 37-91 3-58 (59)
32 d1k61a_ a.4.1.1 (A:) mat alpha 99.7 3.1E-17 2.3E-21 107.8 6.8 52 41-92 4-58 (60)
33 d1hlva1 a.4.1.7 (A:1-66) DNA-b 93.1 0.11 7.7E-06 32.9 5.6 48 38-88 4-51 (66)
34 d1ijwc_ a.4.1.2 (C:) HIN recom 84.6 1.1 8.2E-05 25.9 5.1 40 40-84 4-43 (47)
35 d1rp3a2 a.4.13.2 (A:164-234) S 84.3 1.1 8.3E-05 27.3 5.5 48 41-93 21-68 (71)
36 d1or7a1 a.4.13.2 (A:120-187) S 83.9 1.2 8.5E-05 27.2 5.4 47 42-93 19-65 (68)
37 d1iufa1 a.4.1.7 (A:-2-75) Ars- 81.2 1 7.4E-05 28.9 4.2 32 36-67 6-38 (78)
38 d2pq3a1 a.39.1.5 (A:3-75) Calm 73.4 1.4 0.0001 27.1 3.3 43 42-84 2-51 (73)
39 d1f54a_ a.39.1.5 (A:) Calmodul 72.0 2.5 0.00018 26.1 4.2 45 40-84 2-53 (77)
40 d2jn6a1 a.4.1.19 (A:1-89) Unch 71.6 2.9 0.00021 26.8 4.6 43 39-84 3-45 (89)
41 d1fsea_ a.4.6.2 (A:) Germinati 70.3 5.6 0.00041 23.9 5.6 45 39-89 2-46 (67)
42 d1c07a_ a.39.1.6 (A:) Eps15 {H 68.7 2.8 0.00021 27.1 4.1 45 40-84 2-51 (95)
43 d1ku3a_ a.4.13.2 (A:) Sigma70 65.5 3.6 0.00026 24.8 3.8 40 41-81 8-47 (61)
44 d1fi6a_ a.39.1.6 (A:) Reps1 {M 65.3 3.9 0.00029 26.2 4.3 43 41-83 2-49 (92)
45 d2auwa1 a.35.1.10 (A:88-154) H 61.4 3.7 0.00027 25.3 3.3 39 43-88 2-40 (67)
46 d1avsa_ a.39.1.5 (A:) Troponin 60.6 5.6 0.0004 24.7 4.2 45 39-83 5-56 (81)
47 d1wrka1 a.39.1.5 (A:4-85) Trop 59.8 9.2 0.00067 23.8 5.3 43 42-84 9-59 (82)
48 d1l3la1 a.4.6.2 (A:170-234) Qu 59.6 11 0.00081 22.4 5.4 45 40-90 3-47 (65)
49 d2hkua1 a.4.1.9 (A:18-87) Puta 58.4 3.1 0.00022 25.4 2.5 42 47-90 7-48 (70)
50 d1p4wa_ a.4.6.2 (A:) Transcrip 57.4 15 0.0011 23.1 6.1 46 40-91 21-66 (87)
51 d1a04a1 a.4.6.2 (A:150-216) Ni 53.2 13 0.00095 22.1 5.0 43 41-89 6-48 (67)
52 d2g7la1 a.4.1.9 (A:16-83) Puta 50.0 4.6 0.00034 24.3 2.3 48 42-90 4-52 (68)
53 d1rp3a1 a.4.13.1 (A:87-163) Si 49.4 12 0.00086 22.9 4.4 26 57-85 24-49 (77)
54 d2p7vb1 a.4.13.2 (B:546-613) S 48.4 9.5 0.00069 23.3 3.6 40 41-81 5-44 (68)
55 d2fq4a1 a.4.1.9 (A:9-77) Trans 48.3 6.2 0.00045 23.8 2.7 42 47-89 10-51 (69)
56 d1yioa1 a.4.6.2 (A:131-200) Re 48.0 18 0.0013 21.7 5.0 40 41-86 12-51 (70)
57 d2cpra1 a.60.8.4 (A:483-595) E 47.9 15 0.0011 24.3 5.0 34 37-78 15-48 (113)
58 d1bl0a1 a.4.1.8 (A:9-62) MarA 47.0 2.7 0.0002 24.2 0.7 29 56-84 13-41 (54)
59 d1irza_ a.4.1.11 (A:) Arr10-B 45.4 20 0.0014 21.6 4.8 57 36-92 4-62 (64)
60 d2cqra1 a.4.1.3 (A:7-66) DnaJ 45.4 25 0.0018 20.4 5.8 47 33-79 6-53 (60)
61 d2iu5a1 a.4.1.9 (A:1-71) Trans 45.0 6.1 0.00044 23.9 2.3 41 47-88 12-52 (71)
62 d1j9ia_ a.6.1.5 (A:) Terminase 44.1 6.3 0.00046 24.4 2.2 19 65-83 5-23 (68)
63 d1wdcb_ a.39.1.5 (B:) Myosin E 43.9 21 0.0016 23.7 5.5 44 42-85 1-51 (142)
64 d1ttya_ a.4.13.2 (A:) Sigma70 43.4 12 0.0009 23.9 3.8 40 41-81 18-57 (87)
65 d1dpua_ a.4.5.16 (A:) C-termin 41.3 11 0.00081 23.2 3.1 39 42-81 4-43 (69)
66 d2jxca1 a.39.1.6 (A:121-215) E 41.0 12 0.00089 23.9 3.5 44 40-83 2-49 (95)
67 d1z0xa1 a.4.1.9 (A:4-71) Trans 40.8 11 0.00083 22.4 3.1 39 51-89 12-50 (68)
68 d1s7oa_ a.4.13.3 (A:) Hypothet 40.6 25 0.0019 23.1 5.2 46 42-92 17-62 (106)
69 d2opoa1 a.39.1.10 (A:6-86) Pol 39.5 15 0.0011 22.4 3.7 39 43-81 1-45 (81)
70 d1y9qa1 a.35.1.8 (A:4-82) Prob 38.7 6.9 0.00051 24.0 1.8 23 65-87 24-46 (79)
71 d2fd5a1 a.4.1.9 (A:1-76) Proba 38.3 12 0.0009 22.5 3.0 43 46-89 12-54 (76)
72 d1lvaa3 a.4.5.35 (A:511-574) C 37.8 14 0.001 22.0 3.2 36 47-83 9-44 (64)
73 d1v7ba1 a.4.1.9 (A:1-74) Trans 37.5 11 0.0008 22.7 2.7 44 46-90 9-52 (74)
74 d1utxa_ a.35.1.3 (A:) Putative 36.6 7.9 0.00057 23.0 1.8 23 65-87 17-39 (66)
75 d2p8ta1 a.4.5.72 (A:14-82) Hyp 36.4 8.3 0.00061 23.9 1.9 30 49-81 7-36 (69)
76 d1ui5a1 a.4.1.9 (A:5-75) A-fac 36.2 9.8 0.00072 22.8 2.2 41 47-88 11-51 (71)
77 d1y7ya1 a.35.1.3 (A:5-73) Rest 36.1 8.1 0.00059 23.1 1.8 23 65-87 25-47 (69)
78 d2croa_ a.35.1.2 (A:) cro 434 36.0 8 0.00059 22.8 1.7 24 65-88 19-42 (65)
79 d1exra_ a.39.1.5 (A:) Calmodul 35.5 24 0.0018 23.2 4.6 44 41-84 2-52 (146)
80 d1r69a_ a.35.1.2 (A:) 434 C1 r 35.3 10 0.00074 22.1 2.1 23 65-87 17-39 (63)
81 d2o7ta1 a.4.1.9 (A:1-78) Trans 34.9 9.3 0.00068 23.4 2.0 41 47-88 13-53 (78)
82 d2gena1 a.4.1.9 (A:6-75) Proba 34.5 14 0.001 21.8 2.8 41 47-88 6-46 (70)
83 d1t56a1 a.4.1.9 (A:22-94) Ethr 34.5 12 0.00088 22.3 2.5 42 47-89 9-50 (73)
84 d2g3ba1 a.4.1.9 (A:2-73) Putat 34.4 10 0.00074 22.8 2.1 43 48-91 9-51 (72)
85 d1jt6a1 a.4.1.9 (A:2-72) Multi 34.4 15 0.0011 21.8 2.9 41 48-89 8-48 (71)
86 d2vkva1 a.4.1.9 (A:6-67) Tetra 34.3 10 0.00074 22.2 2.0 25 65-89 22-46 (62)
87 d1pb6a1 a.4.1.9 (A:14-85) Hypo 33.4 15 0.0011 21.9 2.8 42 47-89 10-51 (72)
88 d2gqba1 a.282.1.1 (A:1-130) Hy 33.1 18 0.0013 25.0 3.4 29 57-85 78-111 (130)
89 d2c5ra1 a.251.1.1 (A:66-129) E 33.0 44 0.0032 19.6 5.7 53 42-94 2-54 (64)
90 d2r1jl1 a.35.1.2 (L:3-68) P22 32.5 10 0.00075 22.3 1.8 23 65-87 19-41 (66)
91 d1tuza_ a.39.1.7 (A:) Diacylgl 31.8 8.4 0.00061 26.0 1.4 29 57-85 5-33 (118)
92 d2a6ca1 a.35.1.13 (A:1-69) HTH 31.4 12 0.00091 22.3 2.1 22 65-86 22-43 (69)
93 d3c07a1 a.4.1.9 (A:15-89) Puta 31.3 18 0.0013 21.5 2.9 42 47-89 11-52 (75)
94 d2ppxa1 a.35.1.3 (A:30-91) Unc 31.1 11 0.00082 22.1 1.8 24 65-88 15-38 (62)
95 d1j5ya1 a.4.5.1 (A:3-67) Putat 31.1 26 0.0019 20.6 3.6 35 46-83 9-43 (65)
96 d1xsva_ a.4.13.3 (A:) Hypothet 30.9 46 0.0033 21.8 5.2 46 42-92 19-64 (106)
97 d2i10a1 a.4.1.9 (A:10-78) Puta 30.7 18 0.0013 21.4 2.8 39 50-89 9-47 (69)
98 d2fbqa1 a.4.1.9 (A:2-80) Trans 30.3 14 0.001 22.3 2.3 42 48-90 11-52 (79)
99 d2icta1 a.35.1.3 (A:8-94) Anti 30.2 10 0.00076 23.9 1.6 25 65-89 17-41 (87)
100 d1b0na2 a.35.1.3 (A:1-68) SinR 30.2 11 0.00082 22.3 1.7 23 65-87 17-39 (68)
101 d2b5aa1 a.35.1.3 (A:1-77) Regu 29.8 12 0.00085 22.7 1.8 24 64-87 25-48 (77)
102 d1biaa1 a.4.5.1 (A:1-63) Bioti 28.7 51 0.0037 19.1 4.8 37 44-84 5-41 (63)
103 d1gyxa_ d.80.1.1 (A:) 4-oxaloc 28.7 25 0.0018 21.7 3.3 34 41-84 11-44 (76)
104 d2gfna1 a.4.1.9 (A:4-80) Proba 28.6 14 0.00099 22.4 2.0 42 48-90 13-54 (77)
105 d1rkta1 a.4.1.9 (A:2-82) Hypot 28.1 15 0.0011 22.4 2.1 43 47-90 17-59 (81)
106 d1r8da_ a.6.1.3 (A:) Multidrug 28.0 14 0.001 24.0 2.1 21 64-84 4-24 (109)
107 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 28.0 54 0.004 19.1 4.8 41 41-81 3-43 (59)
108 d2np5a1 a.4.1.9 (A:9-77) Trans 27.6 15 0.0011 21.6 2.0 43 47-90 7-49 (69)
109 d2hbka1 a.60.8.4 (A:421-516) E 26.8 40 0.0029 21.2 4.2 33 39-79 11-43 (96)
110 d2fx0a1 a.4.1.9 (A:4-76) Hemol 26.8 20 0.0014 21.6 2.5 44 47-91 10-53 (73)
111 d1t33a1 a.4.1.9 (A:1-88) Putat 26.2 13 0.00097 23.1 1.6 40 48-89 19-58 (88)
112 d1r8ea1 a.6.1.3 (A:3-120) Tran 26.0 16 0.0011 24.1 2.0 21 64-84 5-25 (118)
113 d1euvb_ d.15.1.1 (B:) SUMO-1 ( 25.8 11 0.00082 23.2 1.1 27 63-89 28-54 (79)
114 d1g8ia_ a.39.1.5 (A:) Frequeni 25.8 25 0.0018 24.5 3.3 29 57-85 2-30 (187)
115 d2d6ya1 a.4.1.9 (A:7-74) Putat 25.2 20 0.0015 21.1 2.3 41 48-89 9-49 (68)
116 d1s6ja_ a.39.1.5 (A:) Calcium- 25.1 5.6 0.00041 25.1 -0.5 44 41-84 16-66 (87)
117 d2np3a1 a.4.1.9 (A:35-99) Puta 25.0 11 0.00078 22.4 0.9 40 50-90 5-44 (65)
118 d1bjfa_ a.39.1.5 (A:) Neurocal 24.8 28 0.002 23.9 3.4 29 57-85 1-29 (181)
119 d2hyja1 a.4.1.9 (A:8-82) Putat 24.8 17 0.0012 21.9 1.8 41 48-89 12-52 (75)
120 d1ctda_ a.39.1.5 (A:) Troponin 24.6 33 0.0024 17.8 2.7 30 43-72 2-33 (34)
121 d1yt3a1 a.60.8.3 (A:194-294) R 24.5 48 0.0035 20.9 4.3 15 40-54 14-28 (101)
122 d1wdcc_ a.39.1.5 (C:) Myosin R 24.4 27 0.002 23.4 3.2 34 42-75 1-41 (152)
123 d2mysb_ a.39.1.5 (B:) Myosin E 24.0 48 0.0035 21.8 4.5 34 42-75 1-39 (145)
124 d1l0oc_ a.4.13.2 (C:) SigmaF { 23.9 45 0.0033 19.0 3.7 19 65-83 34-52 (57)
125 d1d5ya1 a.4.1.8 (A:3-56) Rob t 23.3 11 0.00083 21.3 0.7 27 58-84 15-41 (54)
126 d1ic8a2 a.35.1.1 (A:87-180) He 23.3 43 0.0032 21.6 3.8 46 45-93 27-73 (94)
127 d1jhfa1 a.4.5.2 (A:2-72) LexA 22.2 50 0.0037 19.7 3.8 39 41-81 2-44 (71)
128 d1zk8a1 a.4.1.9 (A:6-77) Trans 21.7 21 0.0016 21.1 1.9 42 47-89 9-50 (72)
129 d2id6a1 a.4.1.9 (A:1-75) Trans 21.5 23 0.0017 21.1 2.0 26 65-90 26-51 (75)
130 d1iq3a_ a.39.1.6 (A:) Pob1 {Hu 21.1 17 0.0013 23.8 1.4 45 39-83 13-62 (110)
131 d1q06a_ a.6.1.3 (A:) Transcrip 20.6 23 0.0017 23.6 2.0 20 65-84 3-22 (127)
132 d1un2a_ c.47.1.13 (A:) Disulfi 20.1 87 0.0063 22.2 5.5 47 61-107 5-51 (195)
133 d2g7ga1 a.4.1.9 (A:9-73) Putat 20.1 24 0.0018 20.7 1.8 27 64-90 21-47 (65)
No 1
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=2.2e-22 Score=139.18 Aligned_cols=66 Identities=35% Similarity=0.550 Sum_probs=61.1
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHHhHH
Q psy1901 32 KRKQRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQ 97 (205)
Q Consensus 32 ~~k~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~~~ 97 (205)
.+.+||+|++|+.+|+.+||.+|..|+||+..+|++||..|||++++|+|||||||+|+|+..+..
T Consensus 10 ~~~~rr~Rt~ft~~Ql~~Le~~F~~~~yPs~~~r~~LA~~l~l~~~qV~iWFqNrR~k~kr~~~~~ 75 (77)
T d1pufa_ 10 ARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 75 (77)
T ss_dssp CCTTSCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCCHHHhhhhhhhhHHHHHHHHHHh
Confidence 345678899999999999999999999999999999999999999999999999999999976553
No 2
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.6e-23 Score=135.23 Aligned_cols=58 Identities=31% Similarity=0.647 Sum_probs=55.5
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 35 QRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 35 ~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
+||+|+.|+.+|+.+||.+|..|+||+..+|++||..|||++++|+|||||||+|+||
T Consensus 1 Grr~Rt~ft~~Q~~~Le~~F~~~~yp~~~~r~~LA~~l~l~~~qV~vWFqNrR~k~kk 58 (58)
T d2craa1 1 GRKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 58 (58)
T ss_dssp CCCSCCCSCHHHHHHHHHHHHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHTTTS
T ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHcCCCHHHeeecccchhhhccC
Confidence 3678999999999999999999999999999999999999999999999999999875
No 3
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=2e-22 Score=132.24 Aligned_cols=57 Identities=44% Similarity=0.779 Sum_probs=55.5
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 36 RRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
||+|+.|+++|+.+||..|..|+||+..++.+||..|||++++|++||||||+|+||
T Consensus 1 rr~Rt~ft~~Ql~~Le~~F~~~~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~k~kr 57 (58)
T d1ig7a_ 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 57 (58)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCChhheeecCcchHhHhcc
Confidence 578999999999999999999999999999999999999999999999999999997
No 4
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.86 E-value=2.2e-22 Score=135.71 Aligned_cols=61 Identities=41% Similarity=0.656 Sum_probs=57.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHHhH
Q psy1901 36 RRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNS 96 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~~ 96 (205)
||+|++|+.+|+.+||.+|..|+||+..++.+||..|||++++|+|||||||+|+|+....
T Consensus 2 rr~Rt~ft~~Ql~~Le~~F~~~~yp~~~~r~~LA~~l~l~~~~V~iWFqNrR~k~kk~~~~ 62 (67)
T d1zq3p1 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQ 62 (67)
T ss_dssp SCCSCCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCCccceeeccccHHHhHhhhhhh
Confidence 5779999999999999999999999999999999999999999999999999999987544
No 5
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=3.4e-22 Score=130.66 Aligned_cols=57 Identities=37% Similarity=0.670 Sum_probs=55.2
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 36 RRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
|+.|++|+++|+.+||.+|..|+||+..++.+||..|||++++|+|||||||+|+||
T Consensus 1 k~~R~~ft~~Q~~~Le~~F~~n~yp~~~~r~~LA~~l~L~~~qV~~WFqNrR~k~kk 57 (57)
T d2e1oa1 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 57 (57)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHhhHhhhhhhhhccC
Confidence 578899999999999999999999999999999999999999999999999999986
No 6
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.86 E-value=4.7e-22 Score=133.33 Aligned_cols=63 Identities=81% Similarity=1.200 Sum_probs=59.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHHhH
Q psy1901 34 KQRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNS 96 (205)
Q Consensus 34 k~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~~ 96 (205)
|+||.|+.|+.+|+.+||.+|..|+||+..++.+||..|||++++|++||||+|+|+|++...
T Consensus 1 k~rr~Rt~ft~~Q~~~Le~~F~~n~yPs~~~r~~LA~~lgl~~~~V~~WFqNrR~k~kk~~~~ 63 (65)
T d1fjla_ 1 KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQHTS 63 (65)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCCChHHHHHHHHHhCCCHHHhhHhhhhHHHHHHhcccc
Confidence 467899999999999999999999999999999999999999999999999999999987543
No 7
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.85 E-value=3.6e-22 Score=130.58 Aligned_cols=57 Identities=44% Similarity=0.702 Sum_probs=55.2
Q ss_pred CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 37 RSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 37 r~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
|.|+.|+.+|+.+||..|..++||+..++.+||..|||++++|+|||||||+|.||+
T Consensus 1 R~Rt~fT~~Ql~~Le~~F~~~~yp~~~~r~~LA~~lgl~~~qV~vWFqNrR~k~kk~ 57 (57)
T d1jgga_ 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQ 57 (57)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCChhHhhhcchhhhhhhhcC
Confidence 679999999999999999999999999999999999999999999999999999974
No 8
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=99.85 E-value=3.5e-22 Score=129.96 Aligned_cols=55 Identities=38% Similarity=0.634 Sum_probs=53.8
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 39 RTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 39 R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
|+.|+.+|+.+||..|..|+||+..+|.+||..|||++++|+|||||||+|+||+
T Consensus 1 Rt~ft~~Q~~~Le~~F~~~~yp~~~~r~~LA~~l~l~~~~V~iWFQNrRak~kk~ 55 (56)
T d9anta_ 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKE 55 (56)
T ss_dssp CCCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCChhHeeeccccchhhhhhc
Confidence 7899999999999999999999999999999999999999999999999999985
No 9
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=6.7e-22 Score=140.04 Aligned_cols=64 Identities=36% Similarity=0.563 Sum_probs=56.3
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHHh
Q psy1901 32 KRKQRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLN 95 (205)
Q Consensus 32 ~~k~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~ 95 (205)
..+++|.|+.|+.+|+.+||.+|..|+||+..+|++||..|||++++|+|||||||+|+||+.+
T Consensus 24 ~~~~kr~Rt~ft~~Ql~~Le~~F~~n~yPs~~~r~~LA~~l~l~~~~V~vWFqNrR~k~Kk~~~ 87 (88)
T d1b72a_ 24 LGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 87 (88)
T ss_dssp ------CCCCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHhCCCCchHHHHHHHHHcCCCHHHeeeccHhHHHHHHHhcc
Confidence 3455788999999999999999999999999999999999999999999999999999999754
No 10
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.6e-21 Score=131.80 Aligned_cols=63 Identities=56% Similarity=0.958 Sum_probs=59.2
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHHhHH
Q psy1901 35 QRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQ 97 (205)
Q Consensus 35 ~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~~~ 97 (205)
+||+|+.|+.+|+.+||..|..|+||+..+|++||..|||++++|++||||+|+|.|+.....
T Consensus 1 grR~Rt~ft~~Ql~~Le~~F~~n~yP~~~~r~~LA~~l~L~~~~V~~WFqNrR~k~kr~~~~~ 63 (68)
T d2cuea1 1 GQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLR 63 (68)
T ss_dssp SCCCCCCSCHHHHHHHHHHHTTCSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHhCcChhheeecCcchhHHHHhhhhhh
Confidence 367899999999999999999999999999999999999999999999999999999876554
No 11
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.84 E-value=2.6e-22 Score=138.86 Aligned_cols=63 Identities=37% Similarity=0.615 Sum_probs=59.4
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHH
Q psy1901 32 KRKQRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQL 94 (205)
Q Consensus 32 ~~k~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~ 94 (205)
+.++||.|++|+.+|+.+||.+|..|+||+..+|++||..|||++++|+|||||||+|.|+..
T Consensus 6 p~k~rr~Rt~ft~~Q~~~Le~~F~~~~yP~~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~ 68 (77)
T d1vnda_ 6 PNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQ 68 (77)
T ss_dssp SSSSCSSCCCCCTTHHHHHHHHHHHCSCCCHHHHHHHHHHHTCCHHHHHHHHHHSSSSCSSSC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCChhhhhhcchhHHHHHHHHh
Confidence 467778899999999999999999999999999999999999999999999999999988764
No 12
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=99.84 E-value=1e-21 Score=126.61 Aligned_cols=53 Identities=38% Similarity=0.752 Sum_probs=51.5
Q ss_pred CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 37 RSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 37 r~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
|+|+.|+.+|+.+||..|..|+||+..+|.+||..|||++++|+|||||||+|
T Consensus 1 R~Rt~ft~~Q~~~Le~~F~~~~yp~~~~r~~LA~~lgL~~~qV~vWFqNrRaK 53 (53)
T d1p7ia_ 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNARAK 53 (53)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCChHHhhhcccccCCC
Confidence 57999999999999999999999999999999999999999999999999986
No 13
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.84 E-value=1.6e-21 Score=131.74 Aligned_cols=61 Identities=36% Similarity=0.669 Sum_probs=58.1
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHHh
Q psy1901 35 QRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLN 95 (205)
Q Consensus 35 ~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~ 95 (205)
+||.|+.|+..|+.+||..|..|+||+..+|.+||..|||++++|++||||+|+|+|+...
T Consensus 2 krr~Rt~ft~~Ql~~Le~~F~~~~yPs~~~r~~LA~~l~L~~~~V~~WFqNrR~k~kk~~~ 62 (68)
T d1ftta_ 2 RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAK 62 (68)
T ss_dssp CSSSCSSCCHHHHHHHHHHHHHSSSCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCCccceeeecccHHHHHhhccc
Confidence 4678999999999999999999999999999999999999999999999999999998743
No 14
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.6e-21 Score=128.68 Aligned_cols=58 Identities=64% Similarity=0.993 Sum_probs=56.3
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 36 RRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
||.|++|+.+|+.+||.+|..|+||+..++.+||..|||++++|++||||+|+|.|+.
T Consensus 2 rr~Rt~ft~~Q~~~Le~~F~~~~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~k~kr~ 59 (60)
T d1yz8p1 2 RRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR 59 (60)
T ss_dssp SCSCCCCCHHHHHHHHHHHTTCSSCCTTTTTHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCChHHHHHHHHHHCCChHHHHHHhHHHHHHHHhc
Confidence 6789999999999999999999999999999999999999999999999999999986
No 15
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=5.5e-21 Score=130.37 Aligned_cols=59 Identities=36% Similarity=0.481 Sum_probs=55.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhc-CCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHH
Q psy1901 36 RRSRTTFTGDQLEELERAFQR-TQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQL 94 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~~-~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~ 94 (205)
++.|++|+.+|+.+||..|.. ++||+..+|++||..|||++++|+|||||||+|+||..
T Consensus 2 ~~~r~~fT~~Ql~~Le~~F~~~n~yP~~~~r~~LA~~lgL~~~~VqvWFqNrRak~rk~~ 61 (72)
T d1uhsa_ 2 SEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRSE 61 (72)
T ss_dssp CCCCCCCCHHHHHHHHHHHHSSCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHccccCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcc
Confidence 678999999999999999986 78999999999999999999999999999999999874
No 16
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.82 E-value=4.3e-21 Score=128.92 Aligned_cols=61 Identities=31% Similarity=0.567 Sum_probs=58.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHH
Q psy1901 34 KQRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQL 94 (205)
Q Consensus 34 k~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~ 94 (205)
|.+|.|+.|+.+|+.+||.+|..|+||+..++++||.+|||++++|++||||+|+|.|+..
T Consensus 2 k~kR~Rt~~t~~Q~~~Le~~F~~n~~Ps~~~~~~LA~~l~l~~~~V~~WFqNrR~k~kk~~ 62 (66)
T d1bw5a_ 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRS 62 (66)
T ss_dssp CCSCCCCCCSHHHHHHHHHHHHHCSCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHCSSCC
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHCCCCCHHHHHHHHHHcCcCHHHhhhhhHhHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999999999999999998864
No 17
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=3.1e-21 Score=129.98 Aligned_cols=61 Identities=26% Similarity=0.462 Sum_probs=57.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 33 RKQRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 33 ~k~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
..+||+|++|+.+|+.+|+.+|..|+||+..++++||..|||++++|++||||+|+++||.
T Consensus 6 ~~~rr~Rt~~t~~q~~~Le~~F~~n~~P~~~~r~~La~~~~l~~~~V~~WFqNrR~k~Kk~ 66 (67)
T d1ocpa_ 6 QARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVRVWFCNRRQKGKRS 66 (67)
T ss_dssp CCSSSCCSSCCHHHHHHHHHHHSSCSCCCHHHHHHHHHHHTCCHHHHHHHHHHHHSSSSSC
T ss_pred hccCCCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHHHHcCCHHHHHHHhHHHHHHHhcC
Confidence 4457889999999999999999999999999999999999999999999999999998864
No 18
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.81 E-value=7.7e-21 Score=124.55 Aligned_cols=57 Identities=32% Similarity=0.506 Sum_probs=55.0
Q ss_pred CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 37 RSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 37 r~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
|+|+.|+.+|+.+||.+|..|+||+..++.+||..|||++++|++||||+|+++|+.
T Consensus 1 r~Rt~~s~~q~~~Le~~F~~~~~P~~~~~~~La~~l~l~~~~V~~WFqNrR~k~kr~ 57 (58)
T d1au7a1 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRV 57 (58)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Confidence 679999999999999999999999999999999999999999999999999999874
No 19
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.81 E-value=1.1e-20 Score=121.68 Aligned_cols=53 Identities=32% Similarity=0.548 Sum_probs=51.4
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHH
Q psy1901 39 RTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLR 91 (205)
Q Consensus 39 R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~k 91 (205)
|++|+++|+.+||..|..|+||+..++.+||..|||++++|++||||||+|.|
T Consensus 1 Rt~~s~~q~~~Le~~F~~~~~P~~~~~~~LA~~lgl~~~qV~~WFqNrR~k~K 53 (53)
T d1le8a_ 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 53 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCHHHHHHHHHhhhhccC
Confidence 78999999999999999999999999999999999999999999999999865
No 20
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1 (Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.6e-20 Score=130.26 Aligned_cols=60 Identities=38% Similarity=0.656 Sum_probs=56.8
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhC---------------CchhhhhhhhhchHHHHHHHHh
Q psy1901 36 RRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTK---------------LTEARVQVWFSNRRARLRKQLN 95 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~---------------l~~~qV~~WFqNrR~k~kr~~~ 95 (205)
||+|+.|+++|+.+||.+|..|+||+..+|++||..|| |++.+|++||||||+|+|++..
T Consensus 1 Rr~R~~ft~~Ql~~LE~~F~~n~yP~~~~R~~LA~~~~~~~~~~~~~~~~~~~l~~~~V~vWFqNRR~k~kk~~~ 75 (82)
T d2cufa1 1 RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRAN 75 (82)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHCCTTCCCCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHhccccccccccchhccCCCHHHHHHHHhhhHHHHHHhhh
Confidence 67899999999999999999999999999999999875 9999999999999999999754
No 21
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=3.3e-20 Score=121.07 Aligned_cols=56 Identities=27% Similarity=0.477 Sum_probs=54.3
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 38 SRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 38 ~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
+||.|+.+|+.+||..|..|+||+..++.+||.+|||++++|++||||+|+|+||.
T Consensus 1 kRT~~~~~q~~~Le~~F~~~~~P~~~~~~~LA~~lgL~~~qV~~WFqNrR~k~kk~ 56 (57)
T d1e3oc1 1 KRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRI 56 (57)
T ss_dssp CCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcc
Confidence 58999999999999999999999999999999999999999999999999999874
No 22
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.6e-20 Score=126.80 Aligned_cols=61 Identities=23% Similarity=0.342 Sum_probs=56.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhh-cCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 33 RKQRRSRTTFTGDQLEELERAFQ-RTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 33 ~k~rr~R~~~s~~q~~~Le~~F~-~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
...+|+|++|+.+|+.+||++|. .++||+.+++++||.+|||++++|++||||+|+|.|+.
T Consensus 5 ~~~~r~R~~~t~~Q~~~Le~~F~~~~~~P~~~~~~~La~~lgl~~~qV~~WFqNrR~k~kk~ 66 (71)
T d1wi3a_ 5 SSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHS 66 (71)
T ss_dssp CCCCCCCCCCCSHHHHHHHHHHHHHCSCCCHHHHHHHHHHSCCCHHHHHHHHHHHHHHCCSS
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCHHHHHHHhHhhHhhhccc
Confidence 34567899999999999999997 48999999999999999999999999999999998864
No 23
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.78 E-value=5.1e-20 Score=128.11 Aligned_cols=61 Identities=23% Similarity=0.332 Sum_probs=55.4
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHhhc----CCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 32 KRKQRRSRTTFTGDQLEELERAFQR----TQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 32 ~~k~rr~R~~~s~~q~~~Le~~F~~----~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
..++||.|++|+.+|+.+|+.+|+. ++||+..++++||++|||++++|+|||||+|++.|+
T Consensus 14 ~~~~kR~Rt~ft~~Q~~~L~~~fe~~~~~~~~p~~~~~~~la~~~gl~~~~i~vWFqN~R~~~k~ 78 (80)
T d1wh7a_ 14 GGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSGPS 78 (80)
T ss_dssp CCCSSCCCCCCCHHHHHHHHHHHHHHTSCCCSSTTHHHHHHHHHSCCCHHHHHHHHHTTSCCSCC
T ss_pred ccCCCCccccCCHHHHHHHHHHHHHhcccccCcCHHHHHHHHHHHCCCHHHeeeecccCcCCCCC
Confidence 3556789999999999999998886 899999999999999999999999999999987654
No 24
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.9e-19 Score=124.06 Aligned_cols=55 Identities=22% Similarity=0.339 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHHhH
Q psy1901 42 FTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNS 96 (205)
Q Consensus 42 ~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~~ 96 (205)
++++|+.+||.+|..|+||+..++++||..|||++++|++||||||++.|+....
T Consensus 11 ~T~~Q~~~Le~~F~~~~~P~~~~r~~LA~~l~l~~~~V~~WFqNrR~r~k~~~~~ 65 (76)
T d2ecba1 11 KTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEEK 65 (76)
T ss_dssp CCHHHHHHHHHHHHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHSCCSC
T ss_pred CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCCHHHHHHhHHHHHHHHHHHhHh
Confidence 5899999999999999999999999999999999999999999999988776443
No 25
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=5.1e-19 Score=120.93 Aligned_cols=59 Identities=37% Similarity=0.647 Sum_probs=55.4
Q ss_pred CCCCCCCCHHHHHHHHHHhh---cCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHH
Q psy1901 36 RRSRTTFTGDQLEELERAFQ---RTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQL 94 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~---~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~ 94 (205)
||+|+.|+++|+.+|+++|. .++||+..++++||.++||+++||++||||+|+|.|+..
T Consensus 2 rk~R~~~t~~q~~~Le~~f~~~~~~pYPs~~~k~~La~~~gl~~~qv~~WF~N~R~r~k~~~ 63 (73)
T d1pufb_ 2 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNI 63 (73)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHCcCHHHhHHHHHHHHHHhcccc
Confidence 67889999999999999997 488999999999999999999999999999999999864
No 26
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=2.5e-19 Score=113.82 Aligned_cols=50 Identities=26% Similarity=0.339 Sum_probs=48.8
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchH
Q psy1901 38 SRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRR 87 (205)
Q Consensus 38 ~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR 87 (205)
.|+.|+.+|+.+||+.|..|+||+..++.+||.+|||++++|++||||||
T Consensus 1 PRt~ft~~Q~~~Le~~F~~n~~P~~~~~~~LA~~l~l~~~~V~~WFqNrR 50 (50)
T d1s7ea1 1 PRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNAR 50 (50)
T ss_dssp CCSCCCHHHHHHHHHHTTSSCSSTHHHHHHHHTTSCSSSHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCcCHHHhhhcCCcCc
Confidence 48999999999999999999999999999999999999999999999997
No 27
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=2.5e-18 Score=118.36 Aligned_cols=56 Identities=27% Similarity=0.364 Sum_probs=52.7
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 38 SRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 38 ~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
.+.+++.+|+.+||.+|..|+||+..++.+||..|||++++|++||||+|+++|+.
T Consensus 6 ~~~r~T~eQ~~~Le~~F~~n~~Ps~~~~~~La~~~gL~~~qV~~WF~NrR~k~k~~ 61 (76)
T d2ecca1 6 SGKRKTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYALKHG 61 (76)
T ss_dssp CCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc
Confidence 34457999999999999999999999999999999999999999999999999986
No 28
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.5e-18 Score=111.03 Aligned_cols=50 Identities=28% Similarity=0.432 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHhhc-CCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 43 TGDQLEELERAFQR-TQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 43 s~~q~~~Le~~F~~-~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
|.+|..+||.+|.. ++||+..++.+||++|||++++|++||||||+|+|+
T Consensus 1 T~~q~~iLE~~F~~~~~~P~~~~~~~LA~~~~ls~~qV~~WFqNrR~k~k~ 51 (52)
T d1x2ma1 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 51 (52)
T ss_dssp SSCHHHHHHHHHHTTCSSCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHSCC
T ss_pred ChhHHHHHHHHHHHcCCCcCHHHHHHHHHHHCcCHHHHHHHHHhhhcccCc
Confidence 45789999999987 689999999999999999999999999999999874
No 29
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat (Rattus rattus) [TaxId: 10117]}
Probab=99.70 E-value=2.1e-18 Score=119.10 Aligned_cols=56 Identities=30% Similarity=0.454 Sum_probs=52.9
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhC---------------------CchhhhhhhhhchHHHHHHHH
Q psy1901 39 RTTFTGDQLEELERAFQRTQYPDVYTREELAQKTK---------------------LTEARVQVWFSNRRARLRKQL 94 (205)
Q Consensus 39 R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~---------------------l~~~qV~~WFqNrR~k~kr~~ 94 (205)
|++|+++|+.+||++|..|+||+..+|++||++|+ |++.+|++||||||++.|++.
T Consensus 1 R~~~tp~Ql~~Le~~F~~n~yPs~~~Re~LA~~ln~~~~~~~~~~~~~~~~~~~~~vt~~~V~~WF~NRR~~~kr~~ 77 (78)
T d1lfba_ 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRH 77 (78)
T ss_dssp CCCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHTTTTCCTTCTTTTGGGCCCHHHHHHHHHHHHHTTSCCC
T ss_pred CccCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHhchhhhccccccccccccccccCCCHHHHHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999999999995 899999999999999998763
No 30
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.8e-17 Score=109.63 Aligned_cols=56 Identities=23% Similarity=0.414 Sum_probs=52.2
Q ss_pred CCCCCCCCHHHHHHHHHHhhc---CCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHH
Q psy1901 36 RRSRTTFTGDQLEELERAFQR---TQYPDVYTREELAQKTKLTEARVQVWFSNRRARLR 91 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~~---~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~k 91 (205)
|++|+.|+++++.+|+++|.. ++||+..++.+||.++||+.+||++||+|+|.|..
T Consensus 3 krkR~~~~~~~~~iL~~wf~~~~~nPyPs~~e~~~La~~~~l~~~qI~~WF~N~R~R~l 61 (62)
T d1x2na1 3 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRIL 61 (62)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHCcCHHHhHHHHHHHHHHhc
Confidence 567789999999999999985 79999999999999999999999999999998865
No 31
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=6.7e-18 Score=110.64 Aligned_cols=55 Identities=24% Similarity=0.476 Sum_probs=50.7
Q ss_pred CCCCCCCHHHHHHHHHHhhc-CCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHH
Q psy1901 37 RSRTTFTGDQLEELERAFQR-TQYPDVYTREELAQKTKLTEARVQVWFSNRRARLR 91 (205)
Q Consensus 37 r~R~~~s~~q~~~Le~~F~~-~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~k 91 (205)
|.+.+++.++..+||++|.. ++||+..++.+||++|||++++|++||||||+++|
T Consensus 3 k~~~~~k~~~~~iLE~~F~~~~~yPs~~~~~~LA~~lgls~~qV~~WFqNrR~k~r 58 (59)
T d2cqxa1 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRNQDK 58 (59)
T ss_dssp CCCCCSCSCSTTHHHHHHHHTCSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCccccHHHHHHHHHcCCCcCHHHHHHHHHHHCcCHHHHHHHHHhhhcccC
Confidence 56677888899999999976 68999999999999999999999999999999976
No 32
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.68 E-value=3.1e-17 Score=107.79 Aligned_cols=52 Identities=31% Similarity=0.533 Sum_probs=48.6
Q ss_pred CCCHHHHHHHHHHhhcC---CCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 41 TFTGDQLEELERAFQRT---QYPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~---~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
+|+.+|+.+|+.+|..+ +||+.+++++||.++||+++||++||||+|.|.|+
T Consensus 4 Rft~~q~~~L~~~f~~~~~~pyPs~~e~~~La~~~gL~~~qV~~WF~N~R~r~K~ 58 (60)
T d1k61a_ 4 RFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKT 58 (60)
T ss_dssp SCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHCcCHHHHhHHhHhhcccccc
Confidence 49999999999999764 79999999999999999999999999999998875
No 33
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.14 E-value=0.11 Score=32.92 Aligned_cols=48 Identities=15% Similarity=0.246 Sum_probs=39.2
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHH
Q psy1901 38 SRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRA 88 (205)
Q Consensus 38 ~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~ 88 (205)
+|..++-++...+-+.|+.++... ..+||+.+|+....|..|..|+..
T Consensus 4 kRk~LT~~eK~~ii~~~e~g~k~s---q~eIA~~fGv~~STvs~IlKnK~k 51 (66)
T d1hlva1 4 KRRQLTFREKSRIIQEVEENPDLR---KGEIARRFNIPPSTLSTILKNKRA 51 (66)
T ss_dssp SSCCCCHHHHHHHHHHHHHCTTSC---HHHHHHHHTCCHHHHHHHHHTHHH
T ss_pred ccccCCHHHHHHHHHHHHcCCcch---HHHHHHHhCCChhHHHHHHHHHHH
Confidence 345689999888888888887554 567999999999999999988543
No 34
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=84.63 E-value=1.1 Score=25.89 Aligned_cols=40 Identities=15% Similarity=0.283 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhh
Q psy1901 40 TTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 40 ~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFq 84 (205)
..++.+|+..+.+.+... . -+.+||+.+|++...|-.||-
T Consensus 4 ~~lt~~q~~~a~~l~~~G-~----s~~~iA~~~gVSr~TiYry~p 43 (47)
T d1ijwc_ 4 RAINKHEQEQISRLLEKG-H----PRQQLAIIFGIGVSTLYRYFP 43 (47)
T ss_dssp CSSCHHHHHHHHHHHHTT-C----CHHHHHHHHTCCHHHHHHHSC
T ss_pred CcCCHHHHHHHHHHHHCC-C----CHHHHHHHHCcCHHHHHhhCC
Confidence 458999999999999754 3 278899999999999999883
No 35
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=84.30 E-value=1.1 Score=27.27 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 41 TFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
.+++.+..+|.-.|.... ...+||+.+|++...|+.....-|.+.|+.
T Consensus 21 ~L~~~~r~v~~l~~~~~~-----s~~eIA~~lgis~~tv~~~~~ra~~~Lr~~ 68 (71)
T d1rp3a2 21 KLPEREKLVIQLIFYEEL-----PAKEVAKILETSVSRVSQLKAKALERLREM 68 (71)
T ss_dssp TSCHHHHHHHHHHHTSCC-----CHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhHhC-----CHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 367888888888775442 578899999999999998887666655543
No 36
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=83.90 E-value=1.2 Score=27.24 Aligned_cols=47 Identities=13% Similarity=0.055 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHH
Q psy1901 42 FTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQ 93 (205)
Q Consensus 42 ~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~ 93 (205)
+++.+..+|.-.|.... ...+||+.+|++...|+..++.-|.+.|+.
T Consensus 19 Lp~~~r~v~~l~~~~~~-----s~~eIA~~lgis~~tv~~~l~ra~~~Lr~~ 65 (68)
T d1or7a1 19 LPEDLRMAITLRELDGL-----SYEEIAAIMDCPVGTVRSRIFRAREAIDNK 65 (68)
T ss_dssp SCHHHHHHHHHHHTTCC-----CHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC-----CHHHHHHHHCcCHHHHHHHHHHHHHHHHHH
Confidence 56677777777765543 367899999999999999998766666553
No 37
>d1iufa1 a.4.1.7 (A:-2-75) Ars-binding protein 1, ABP1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=81.19 E-value=1 Score=28.94 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=25.8
Q ss_pred CCCCCCCCHHHHHHHHHHh-hcCCCCCHHHHHH
Q psy1901 36 RRSRTTFTGDQLEELERAF-QRTQYPDVYTREE 67 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F-~~~~~ps~~~r~~ 67 (205)
+..|+.++-+|+..|..+| ..+++|+-....+
T Consensus 6 ~~~R~aIs~~qK~ALR~~~~~~~~~~sqk~l~~ 38 (78)
T d1iufa1 6 KIKRRAITEHEKRALRHYFFQLQNRSGQQDLIE 38 (78)
T ss_dssp CCSSSCCCSHHHHHHHHHHHSSSSCCCHHHHHH
T ss_pred ccccccCCHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 5678899999999999996 7788887664443
No 38
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}
Probab=73.43 E-value=1.4 Score=27.08 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHhhC--Cchhhhhhhhh
Q psy1901 42 FTGDQLEELERAFQ-----RTQYPDVYTREELAQKTK--LTEARVQVWFS 84 (205)
Q Consensus 42 ~s~~q~~~Le~~F~-----~~~~ps~~~r~~LA~~l~--l~~~qV~~WFq 84 (205)
++.+|+..|.+.|. .+.+.+..+...+...+| +++.+|+.+|+
T Consensus 2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~ 51 (73)
T d2pq3a1 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 51 (73)
T ss_dssp CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 68899999999984 456899999999888887 56777777774
No 39
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.02 E-value=2.5 Score=26.08 Aligned_cols=45 Identities=18% Similarity=0.222 Sum_probs=35.4
Q ss_pred CCCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHhhC--Cchhhhhhhhh
Q psy1901 40 TTFTGDQLEELERAFQ-----RTQYPDVYTREELAQKTK--LTEARVQVWFS 84 (205)
Q Consensus 40 ~~~s~~q~~~Le~~F~-----~~~~ps~~~r~~LA~~l~--l~~~qV~~WFq 84 (205)
+.|+.+|+..|.+.|. .+.+.+..+...+...+| ++...|+.+|.
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~ 53 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMN 53 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 3589999999999984 456889998888888886 56667777774
No 40
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=71.56 E-value=2.9 Score=26.84 Aligned_cols=43 Identities=7% Similarity=0.259 Sum_probs=31.7
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhh
Q psy1901 39 RTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 39 R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFq 84 (205)
|..|+.+.....-+.+.... -.-..++|+.+|++...|..|.+
T Consensus 3 rk~Ys~EfK~~aV~l~~~~~---g~s~~~vA~~lGIs~~tl~~W~k 45 (89)
T d2jn6a1 3 TKTYSEEFKRDAVALYENSD---GASLQQIANDLGINRVTLKNWII 45 (89)
T ss_dssp CCCCCHHHHHHHHHHHTTGG---GSCHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcC---CCcHHHHHHHHCCCHHHHHHHHH
Confidence 44699998877666664321 12356799999999999999974
No 41
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=70.29 E-value=5.6 Score=23.92 Aligned_cols=45 Identities=22% Similarity=0.242 Sum_probs=33.0
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 39 RTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 39 R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
|..+|+.|..+|.-.- ..+ .-.++|..+|++++.|+.-..+=+.|
T Consensus 2 ~p~LT~rE~~vl~l~~--~G~----s~~eIA~~L~is~~TV~~~~~~i~~K 46 (67)
T d1fsea_ 2 KPLLTKREREVFELLV--QDK----TTKEIASELFISEKTVRNHISNAMQK 46 (67)
T ss_dssp CCCCCHHHHHHHHHHT--TTC----CHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH--ccC----CHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3468999999996653 222 35678999999999998876544444
No 42
>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.74 E-value=2.8 Score=27.11 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHHHhhc-----CCCCCHHHHHHHHHhhCCchhhhhhhhh
Q psy1901 40 TTFTGDQLEELERAFQR-----TQYPDVYTREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 40 ~~~s~~q~~~Le~~F~~-----~~~ps~~~r~~LA~~l~l~~~qV~~WFq 84 (205)
+.++++++..+++.|.. +.+.+..+...+..++||+...++..|.
T Consensus 2 w~lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~ 51 (95)
T d1c07a_ 2 WVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWS 51 (95)
T ss_dssp CSSCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHH
Confidence 35789999999999953 3589999999999999999988887763
No 43
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=65.49 E-value=3.6 Score=24.84 Aligned_cols=40 Identities=15% Similarity=0.032 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhh
Q psy1901 41 TFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQV 81 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~ 81 (205)
.++..+..+|...|..+... .....++|+.+|++...|+.
T Consensus 8 ~L~~rer~Ii~~ryGl~~~~-~~tl~eIa~~lgiS~erVrq 47 (61)
T d1ku3a_ 8 KLSEREAMVLKMRKGLIDGR-EHTLEEVGAYFGVTRERIRQ 47 (61)
T ss_dssp TSCHHHHHHHHHHHTTTTSS-CCCHHHHHHHHTCCHHHHHH
T ss_pred cCCHHHHHHHHHHhCCCCCC-CCCHHHHHHHHCCCHHHHHH
Confidence 47899999999999765432 24578899999999988865
No 44
>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=65.28 E-value=3.9 Score=26.16 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHHHhhcC-----CCCCHHHHHHHHHhhCCchhhhhhhh
Q psy1901 41 TFTGDQLEELERAFQRT-----QYPDVYTREELAQKTKLTEARVQVWF 83 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~-----~~ps~~~r~~LA~~l~l~~~qV~~WF 83 (205)
.++++++..+++.|... .+.+..+...+..+.||+..+++..|
T Consensus 2 ~ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~ 49 (92)
T d1fi6a_ 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIW 49 (92)
T ss_dssp CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHH
Confidence 58999999999999653 47888999999999999998876655
No 45
>d2auwa1 a.35.1.10 (A:88-154) Hypothetical protein NE0471 C-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=61.43 E-value=3.7 Score=25.34 Aligned_cols=39 Identities=5% Similarity=0.063 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHH
Q psy1901 43 TGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRA 88 (205)
Q Consensus 43 s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~ 88 (205)
+.+++..|.+.... ...+||+.||++.+.|..|=.++|.
T Consensus 2 s~e~~k~~R~~~gl-------tQ~elA~~LGvs~~ti~~yE~G~r~ 40 (67)
T d2auwa1 2 SHEMFGDWMHRNNL-------SLTTAAEALGISRRMVSYYRTAHKI 40 (67)
T ss_dssp CHHHHHHHHHHTTC-------CHHHHHHHHTSCHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcCC-------CHHHHHHHhCCCHHHHHHHHcCCCC
Confidence 44555555544322 2468999999999999999888764
No 46
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=60.62 E-value=5.6 Score=24.71 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=34.4
Q ss_pred CCCCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHhhC--Cchhhhhhhh
Q psy1901 39 RTTFTGDQLEELERAFQ-----RTQYPDVYTREELAQKTK--LTEARVQVWF 83 (205)
Q Consensus 39 R~~~s~~q~~~Le~~F~-----~~~~ps~~~r~~LA~~l~--l~~~qV~~WF 83 (205)
|..++.+|+..|.+.|. ...+.+..+...+...+| +++..|+.+|
T Consensus 5 ~~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~ 56 (81)
T d1avsa_ 5 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII 56 (81)
T ss_dssp HHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHH
Confidence 45589999999999874 346899999999888876 5566665555
No 47
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=59.80 E-value=9.2 Score=23.80 Aligned_cols=43 Identities=16% Similarity=0.140 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHhh------cCCCCCHHHHHHHHHhhC--Cchhhhhhhhh
Q psy1901 42 FTGDQLEELERAFQ------RTQYPDVYTREELAQKTK--LTEARVQVWFS 84 (205)
Q Consensus 42 ~s~~q~~~Le~~F~------~~~~ps~~~r~~LA~~l~--l~~~qV~~WFq 84 (205)
++.+|+..+++.|. .+.+.+..+...+.+.+| +++.+|+.+|.
T Consensus 9 ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~ 59 (82)
T d1wrka1 9 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMID 59 (82)
T ss_dssp CCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 78899999999983 246899999999999987 56666666663
No 48
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=59.58 E-value=11 Score=22.35 Aligned_cols=45 Identities=18% Similarity=0.093 Sum_probs=33.0
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 40 TTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 40 ~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
..+++.|+.+|.-.-.- ..-.++|..|+++++.|+.-.++=+.|.
T Consensus 3 ~~Lt~rE~~vl~l~~~G------~s~~eIA~~l~iS~~TV~~~~~~i~~Kl 47 (65)
T d1l3la1 3 AWLDPKEATYLRWIAVG------KTMEEIADVEGVKYNSVRVKLREAMKRF 47 (65)
T ss_dssp CCCCHHHHHHHHHHTTT------CCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHhc------CCHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 35788899999665432 2367899999999999998776544443
No 49
>d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=58.39 E-value=3.1 Score=25.40 Aligned_cols=42 Identities=7% Similarity=0.168 Sum_probs=32.8
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
+..-.+.|....| .. ...+||+..|++...|-.+|.||-.=.
T Consensus 7 l~aA~~l~~~~G~-~~-t~~~Ia~~agvs~~~~Y~~F~~K~~L~ 48 (70)
T d2hkua1 7 FTAATELFLEHGE-GV-PITQICAAAGAHPNQVTYYYGSKERLF 48 (70)
T ss_dssp HHHHHHHHHHHCT-TS-CHHHHHHHHTCCHHHHHHHHSSHHHHH
T ss_pred HHHHHHHHHhccc-Cc-hHHHHHHHHCCChhhHHhcCCCHHHHH
Confidence 3444566777777 54 688999999999999999999886543
No 50
>d1p4wa_ a.4.6.2 (A:) Transcriptional regulator RcsB {Erwinia amylovora [TaxId: 552]}
Probab=57.38 E-value=15 Score=23.15 Aligned_cols=46 Identities=13% Similarity=0.039 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHH
Q psy1901 40 TTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLR 91 (205)
Q Consensus 40 ~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~k 91 (205)
..+|+.|..+|.-+..--. ..+||..|+++++-|+.-.++=+.|..
T Consensus 21 ~~LT~rE~~vl~ll~~G~s------~~eIA~~l~iS~~TV~~~~~~i~~Kl~ 66 (87)
T d1p4wa_ 21 KRLSPKESEVLRLFAEGFL------VTEIAKKLNRSIKTISSQKKSAMMKLG 66 (87)
T ss_dssp SSCCHHHHHHHHHHHHTCC------HHHHHHHHTSCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHcCCC------HHHHHHHhCCCHHHHHHHHHHHHHHcC
Confidence 3589999999988875444 678999999999999987766555544
No 51
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=53.21 E-value=13 Score=22.14 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 41 TFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
.+|+.|+.+|.-+-.-. .-.+||.+|+++++-|+.-..+=..|
T Consensus 6 ~LT~rE~~vl~ll~~G~------s~~eIA~~l~iS~~TV~~~~~~i~~K 48 (67)
T d1a04a1 6 QLTPRERDILKLIAQGL------PNKMIARRLDITESTVKVHVKHMLKK 48 (67)
T ss_dssp GSCHHHHHHHHHHHTTC------CHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCC------CHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 58999999997665322 25789999999999998866544443
No 52
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=50.03 E-value=4.6 Score=24.32 Aligned_cols=48 Identities=17% Similarity=0.154 Sum_probs=33.8
Q ss_pred CCHHH-HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 42 FTGDQ-LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 42 ~s~~q-~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
+++++ +....+.|....|-.. ....||+.+|++..-|..-|.||-.=.
T Consensus 4 ~tr~~Il~aa~~l~~~~g~~~~-si~~ia~~~gvs~~~~y~hF~~K~~L~ 52 (68)
T d2g7la1 4 LSRRWIVDTAVALMRAEGLEKV-TMRRLAQELDTGPASLYVYVANTAELH 52 (68)
T ss_dssp CCHHHHHHHHHHHHHHHCSSSC-CHHHHHHHTTSCHHHHTTTCCSHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCcccC-CHHHHHHHHCcCHhHhhHHCcCHHHHH
Confidence 34444 3344555666665444 467889999999999999999885543
No 53
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=49.36 E-value=12 Score=22.93 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=20.5
Q ss_pred CCCCCHHHHHHHHHhhCCchhhhhhhhhc
Q psy1901 57 TQYPDVYTREELAQKTKLTEARVQVWFSN 85 (205)
Q Consensus 57 ~~~ps~~~r~~LA~~l~l~~~qV~~WFqN 85 (205)
...|+. .+||..|||+...|+-|...
T Consensus 24 GR~Pt~---~EiA~~lg~s~~e~~~~l~~ 49 (77)
T d1rp3a1 24 GREPTD---EEVAKELGISTEELFKTLDK 49 (77)
T ss_dssp SSCCCH---HHHHHHHTSCHHHHHHHHHH
T ss_pred CcCCCH---HHHHHHHCcCHHHHHHHHHH
Confidence 445554 57899999999999999754
No 54
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=48.39 E-value=9.5 Score=23.34 Aligned_cols=40 Identities=25% Similarity=0.359 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhh
Q psy1901 41 TFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQV 81 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~ 81 (205)
.+++.+..+|...|..+.+.. ....+||..+||+...|+.
T Consensus 5 ~L~~rE~~Ii~~rfGl~~~~~-~tl~eI~~~lgiSrerVrq 44 (68)
T d2p7vb1 5 GLTAREAKVLRMRFGIDMNTD-YTLEEVGKQFDVTRERIRQ 44 (68)
T ss_dssp CCCHHHHHHHHHHTTTTSSSC-CCHHHHHHHHTCCHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCCCc-CCHHHHHHHHCCCHHHHHH
Confidence 478889999999997765332 4567899999999987764
No 55
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=48.34 E-value=6.2 Score=23.76 Aligned_cols=42 Identities=19% Similarity=0.412 Sum_probs=32.1
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
+....+.|..+.|-... ..+||++.|++...|...|.||-.=
T Consensus 10 l~aa~~l~~~~G~~~~t-~~~Ia~~agvs~~~~y~~F~~k~~L 51 (69)
T d2fq4a1 10 LSASYELLLESGFKAVT-VDKIAERAKVSKATIYKWWPNKAAV 51 (69)
T ss_dssp HHHHHHHHHHHCTTTCC-HHHHHHHHTCCHHHHHHHCSSHHHH
T ss_pred HHHHHHHHHHhCcccCC-HHHHHHHHCcCHHHHHHHCCCHHHH
Confidence 44556667777755443 6788999999999999999987654
No 56
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=48.04 E-value=18 Score=21.75 Aligned_cols=40 Identities=20% Similarity=0.300 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhch
Q psy1901 41 TFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNR 86 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNr 86 (205)
.+|+.+..+|.-.-. .+ .-.+||..||++++.|+.-..+=
T Consensus 12 ~LT~rE~~vl~~l~~--G~----s~~eIA~~l~iS~~TV~~~~~~i 51 (70)
T d1yioa1 12 SLTGREQQVLQLTIR--GL----MNKQIAGELGIAEVTVKVHRHNI 51 (70)
T ss_dssp TSCHHHHHHHHHHTT--TC----CHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHc--CC----CHHHHHHHHCCCHHHHHHHHHHH
Confidence 378888888876643 32 24579999999999998765433
No 57
>d2cpra1 a.60.8.4 (A:483-595) Exosome component 10, EXOSC10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.93 E-value=15 Score=24.33 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=26.6
Q ss_pred CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhh
Q psy1901 37 RSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEAR 78 (205)
Q Consensus 37 r~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~q 78 (205)
|....+++.|+.+|++.+ ..|.++|...++....
T Consensus 15 k~~~~l~~~qlavl~~L~--------~wRe~~Ar~~d~p~~~ 48 (113)
T d2cpra1 15 KQKKHLNTQQLTAFQLLF--------AWRDKTARREDESYGY 48 (113)
T ss_dssp SSSSCCCHHHHHHHHHHH--------HHHHHHHHHTTCCHHH
T ss_pred hcccCCCHHHHHHHHHHH--------HHHHHHHHHhCCCcce
Confidence 344569999999999997 6788888888776643
No 58
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=47.01 E-value=2.7 Score=24.21 Aligned_cols=29 Identities=10% Similarity=0.225 Sum_probs=23.1
Q ss_pred cCCCCCHHHHHHHHHhhCCchhhhhhhhh
Q psy1901 56 RTQYPDVYTREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 56 ~~~~ps~~~r~~LA~~l~l~~~qV~~WFq 84 (205)
...|-..-...+||+.+||+++.+..+|+
T Consensus 13 ~~~~~~~~tl~~lA~~~~~s~~~l~r~Fk 41 (54)
T d1bl0a1 13 EDNLESPLSLEKVSERSGYSKWHLQRMFK 41 (54)
T ss_dssp HTTTTSCCCCHHHHHHSSSCHHHHHHHHH
T ss_pred HhccCCCCCHHHHHHHHCcCHHHHHHHHH
Confidence 34444556678999999999999999995
No 59
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=45.39 E-value=20 Score=21.63 Aligned_cols=57 Identities=19% Similarity=0.194 Sum_probs=37.5
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCC--CCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 36 RRSRTTFTGDQLEELERAFQRTQ--YPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 36 rr~R~~~s~~q~~~Le~~F~~~~--~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
||.|.++|++.-..+.+....-. .-++..+.++-..-+|+..+|+.=.|--|.+.+|
T Consensus 4 kk~R~~WT~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKYrl~l~k 62 (64)
T d1irza_ 4 KKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKK 62 (64)
T ss_dssp CCSSCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHHHHHHHh
Confidence 55677888887655555443322 3444555555556688999999988877777654
No 60
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.36 E-value=25 Score=20.36 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhh-CCchhhh
Q psy1901 33 RKQRRSRTTFTGDQLEELERAFQRTQYPDVYTREELAQKT-KLTEARV 79 (205)
Q Consensus 33 ~k~rr~R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l-~l~~~qV 79 (205)
.+.+..+..+|.++...|.+.+...+.-+...=..||..+ |=+..||
T Consensus 6 ~~~~~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~~Rt~~qc 53 (60)
T d2cqra1 6 ERARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDC 53 (60)
T ss_dssp CTTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHH
T ss_pred ccCCcCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcCCCCHHHH
Confidence 3445556679999999999998876554444445677777 4444444
No 61
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=45.00 E-value=6.1 Score=23.87 Aligned_cols=41 Identities=15% Similarity=0.357 Sum_probs=31.9
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRA 88 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~ 88 (205)
+..+.+.|...+|-.. ....||+.+|++...+-..|.||-.
T Consensus 12 ~~aa~~l~~~~G~~~~-sv~~Ia~~agvs~~t~Y~~F~~k~~ 52 (71)
T d2iu5a1 12 AKAFKDLMQSNAYHQI-SVSDIMQTAKIRRQTFYNYFQNQEE 52 (71)
T ss_dssp HHHHHHHHHHSCGGGC-CHHHHHHHHTSCGGGGGGTCSSHHH
T ss_pred HHHHHHHHHHcCcccC-CHHHHHHHhCccccHHHHHcCCHHH
Confidence 4566777777775443 4678899999999999999998654
No 62
>d1j9ia_ a.6.1.5 (A:) Terminase gpNU1 subunit domain {Bacteriophage lambda [TaxId: 10710]}
Probab=44.08 E-value=6.3 Score=24.41 Aligned_cols=19 Identities=21% Similarity=0.344 Sum_probs=17.8
Q ss_pred HHHHHHhhCCchhhhhhhh
Q psy1901 65 REELAQKTKLTEARVQVWF 83 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WF 83 (205)
|.+||+.+|++++.|..|-
T Consensus 5 k~~lA~iFGVS~~TI~~W~ 23 (68)
T d1j9ia_ 5 KKQLADIFGASIRTIQNWQ 23 (68)
T ss_dssp HHHHHHHTTCCHHHHHHHT
T ss_pred HHHHHHHhCCCHHHHHHHH
Confidence 7899999999999999995
No 63
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=43.89 E-value=21 Score=23.71 Aligned_cols=44 Identities=11% Similarity=0.284 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHhhC--Cchhhhhhhhhc
Q psy1901 42 FTGDQLEELERAFQ-----RTQYPDVYTREELAQKTK--LTEARVQVWFSN 85 (205)
Q Consensus 42 ~s~~q~~~Le~~F~-----~~~~ps~~~r~~LA~~l~--l~~~qV~~WFqN 85 (205)
++++|+..|++.|. .+.+.+..+...+.+.+| +++.+|...|.+
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~ 51 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE 51 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHh
Confidence 57899999999884 445789988888888876 455566665543
No 64
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima [TaxId: 2336]}
Probab=43.41 E-value=12 Score=23.93 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=31.9
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhh
Q psy1901 41 TFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQV 81 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~ 81 (205)
.+++.+..+|...|....... ....+||+.+|++...|+.
T Consensus 18 ~L~~rE~~Ii~~rfGl~~~~~-~tl~eI~~~lgiSrERVRQ 57 (87)
T d1ttya_ 18 TLSPREAMVLRMRYGLLDGKP-KTLEEVGQYFNVTRERIRQ 57 (87)
T ss_dssp TSCHHHHHHHHHHHTTTTSSC-CCHHHHHHHHTCCHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCCCc-CCHHHHHHHhCCCHHHHHH
Confidence 478899999999997654432 4578899999999988765
No 65
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.27 E-value=11 Score=23.15 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHhh-CCchhhhhh
Q psy1901 42 FTGDQLEELERAFQRTQYPDVYTREELAQKT-KLTEARVQV 81 (205)
Q Consensus 42 ~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l-~l~~~qV~~ 81 (205)
+++.|..+|.-+ ..|+-..--.+.+|+.+| ||+..+|+.
T Consensus 4 Ls~~q~~V~~~i-~s~~~~eGi~~~el~~~l~~~~~~~i~~ 43 (69)
T d1dpua_ 4 LTVAQNQVLNLI-KACPRPEGLNFQDLKNQLKHMSVSSIKQ 43 (69)
T ss_dssp SCHHHHHHHHHH-HHCCCTTTEEHHHHHHHSTTSCHHHHHH
T ss_pred CCHHHHHHHHHH-HhCCCccCcCHHHHHHHccCCCHHHHHH
Confidence 577788888655 456655556788999998 799988754
No 66
>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.99 E-value=12 Score=23.88 Aligned_cols=44 Identities=7% Similarity=0.053 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHhhc----CCCCCHHHHHHHHHhhCCchhhhhhhh
Q psy1901 40 TTFTGDQLEELERAFQR----TQYPDVYTREELAQKTKLTEARVQVWF 83 (205)
Q Consensus 40 ~~~s~~q~~~Le~~F~~----~~~ps~~~r~~LA~~l~l~~~qV~~WF 83 (205)
..++++++..+++.|.. +.+.+..+...+..+.||...+++..+
T Consensus 2 w~ls~ee~~~y~~~F~~~D~~~G~i~~~el~~~l~~~gl~~~~L~~Iw 49 (95)
T d2jxca1 2 WAVKPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVW 49 (95)
T ss_dssp CSSCHHHHHHHHHHHHHTCCBTTEEEHHHHHHHHTTSSCCHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHcCCCHHHHHHHH
Confidence 35889999999999964 357888888888888999988776443
No 67
>d1z0xa1 a.4.1.9 (A:4-71) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=40.76 E-value=11 Score=22.37 Aligned_cols=39 Identities=10% Similarity=0.218 Sum_probs=28.3
Q ss_pred HHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 51 ERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 51 e~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
.+.|.+..-...-....||+++|++..-|-..|.||-.=
T Consensus 12 ~~l~~e~~G~~~~t~~~Ia~~agvs~~~iy~hF~~K~~L 50 (68)
T d1z0xa1 12 FSLLEKSPTLEQLSMRKVAKQLGVQAPAIYWYFKNKQAL 50 (68)
T ss_dssp HHHHHHSCCGGGCCHHHHHHHHTSCHHHHHTTCSSHHHH
T ss_pred HHHHHHcCCccccCHHHHHHHHCcchhHHHHhcCCHHHH
Confidence 334544433444457789999999999999999987653
No 68
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=40.59 E-value=25 Score=23.11 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 42 FTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 42 ~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
+++.|+.++.-.|...- .-.+||..+|++...|+.=+..-|.+.+.
T Consensus 17 Lp~~qR~v~~L~y~~~l-----s~~EIA~~lgiS~~aV~~~l~RA~~~L~~ 62 (106)
T d1s7oa_ 17 LTDKQMNYIELYYADDY-----SLAEIADEFGVSRQAVYDNIKRTEKILET 62 (106)
T ss_dssp SCHHHHHHHHHHHHTCC-----CHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCC-----CHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 67888888888765443 36789999999999999977755555554
No 69
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}
Probab=39.54 E-value=15 Score=22.44 Aligned_cols=39 Identities=15% Similarity=0.140 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHhh-----cCCCCCHHHHHHHHHhhC-Cchhhhhh
Q psy1901 43 TGDQLEELERAFQ-----RTQYPDVYTREELAQKTK-LTEARVQV 81 (205)
Q Consensus 43 s~~q~~~Le~~F~-----~~~~ps~~~r~~LA~~l~-l~~~qV~~ 81 (205)
|++|+..|++.|. .+.+.+..+...+...+| +++.+|+-
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~ 45 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRR 45 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHH
Confidence 5678888888874 345777777777777775 55555443
No 70
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=38.72 E-value=6.9 Score=24.01 Aligned_cols=23 Identities=17% Similarity=0.043 Sum_probs=20.7
Q ss_pred HHHHHHhhCCchhhhhhhhhchH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRR 87 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR 87 (205)
..+||+.+|++...|..|..+++
T Consensus 24 q~~lA~~~gis~~~i~~~E~g~~ 46 (79)
T d1y9qa1 24 LDATAQLTGVSKAMLGQIERGES 46 (79)
T ss_dssp HHHHHHHHSSCHHHHHHHHTTCS
T ss_pred HHHHHHHHCcchhHHHHHHcCCC
Confidence 57899999999999999998775
No 71
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=38.26 E-value=12 Score=22.49 Aligned_cols=43 Identities=16% Similarity=0.114 Sum_probs=32.1
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 46 QLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 46 q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
-+....+.|....|-.. ...+||+..|++..-|-.+|.||..=
T Consensus 12 Il~aa~~l~~~~G~~~~-si~~Ia~~agvs~~t~Y~~F~~Ke~L 54 (76)
T d2fd5a1 12 ILGAATQALLERGAVEP-SVGEVMGAAGLTVGGFYAHFQSKDAL 54 (76)
T ss_dssp HHHHHHHHHHHHTTTSC-CHHHHHHHTTCCGGGGGGTCSCHHHH
T ss_pred HHHHHHHHHHHhCcccc-cHHHHHHHhCCCccchhhcCCCHHHH
Confidence 34455556776665443 36788999999999999999988653
No 72
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=37.82 E-value=14 Score=22.02 Aligned_cols=36 Identities=17% Similarity=0.329 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhh
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWF 83 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WF 83 (205)
...++..|....+-. ....+||..+|++++.|+--+
T Consensus 9 ~~~I~~~~~~~g~~P-P~vrdl~~~l~~~e~~~~~lL 44 (64)
T d1lvaa3 9 LKDLEDKYRVSRWQP-PSFKEVAGSFNLDPSELEELL 44 (64)
T ss_dssp HHHHHHHHHHHTTSC-CBHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCC-CcHHHHHHHhCCCHHHHHHHH
Confidence 345666787766433 346788999999999987755
No 73
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=37.50 E-value=11 Score=22.67 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=33.6
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 46 QLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 46 q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
-+....+.|....|-... ..+||+..|++...|-..|.||..=.
T Consensus 9 Il~aa~~l~~~~G~~~~s-~~~Ia~~agvs~~t~Y~~F~~K~~L~ 52 (74)
T d1v7ba1 9 ILRTAIDYIGEYSLETLS-YDSLAEATGLSKSGLIYHFPSRHALL 52 (74)
T ss_dssp HHHHHHHHHHHSCSTTCC-HHHHHHHHCSCHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHhCccccC-HHHHHHHhCcCcchHhhhCCCHHHHH
Confidence 345566667777765544 67889999999999999999987543
No 74
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=36.55 E-value=7.9 Score=22.98 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=20.3
Q ss_pred HHHHHHhhCCchhhhhhhhhchH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRR 87 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR 87 (205)
..+||+.+|++...|..|-.+++
T Consensus 17 q~elA~~~gis~~~is~~e~g~~ 39 (66)
T d1utxa_ 17 QSELAALLEVSRQTINGIEKNKY 39 (66)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSC
T ss_pred HHHHHHhcccCHHHHHHHHcCCC
Confidence 56889999999999999998765
No 75
>d2p8ta1 a.4.5.72 (A:14-82) Hypothetical protein PH0730 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=36.36 E-value=8.3 Score=23.87 Aligned_cols=30 Identities=23% Similarity=0.427 Sum_probs=21.4
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhh
Q psy1901 49 ELERAFQRTQYPDVYTREELAQKTKLTEARVQV 81 (205)
Q Consensus 49 ~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~ 81 (205)
+|...|...+ | -=|..||+.|+|+++.|+.
T Consensus 7 vl~~l~ll~q-P--iGRr~La~~L~l~Er~vRt 36 (69)
T d2p8ta1 7 VLAVIFLLKE-P--LGRKQISERLELGEGSVRT 36 (69)
T ss_dssp HHHHHHHTTS-C--BCHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHcC-C--ccHHHHHHHcCCcHHHHHH
Confidence 4555565332 2 4478899999999999876
No 76
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=36.20 E-value=9.8 Score=22.82 Aligned_cols=41 Identities=17% Similarity=0.333 Sum_probs=30.3
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRA 88 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~ 88 (205)
+..-.+.|....|-.. ....||+..|++..-+-.+|.||-.
T Consensus 11 l~aa~~l~~~~G~~~~-si~~Ia~~agvs~~~~y~~F~sK~~ 51 (71)
T d1ui5a1 11 IGAAADLFDRRGYEST-TLSEIVAHAGVTKGALYFHFAAKED 51 (71)
T ss_dssp HHHHHHHHHHHCTTTC-CHHHHHHHHTCCHHHHHHHCSSHHH
T ss_pred HHHHHHHHHHhCcccc-CHHHHHHHHCcCHhHHHHHCcCHHH
Confidence 3344455666665443 4778899999999999999998753
No 77
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=36.08 E-value=8.1 Score=23.11 Aligned_cols=23 Identities=26% Similarity=0.144 Sum_probs=20.0
Q ss_pred HHHHHHhhCCchhhhhhhhhchH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRR 87 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR 87 (205)
..+||+.+|++...|..|-.+++
T Consensus 25 q~~lA~~~gis~~~i~~~E~g~~ 47 (69)
T d1y7ya1 25 QETLAFLSGLDRSYVGGVERGQR 47 (69)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCS
T ss_pred HHHHHhHhCCCHHHHHHHHCCCC
Confidence 46789999999999999988765
No 78
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=36.03 E-value=8 Score=22.82 Aligned_cols=24 Identities=21% Similarity=0.253 Sum_probs=20.6
Q ss_pred HHHHHHhhCCchhhhhhhhhchHH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRRA 88 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR~ 88 (205)
..+||+.+|++...|..|-.+++.
T Consensus 19 q~~lA~~~gvs~~ti~~~E~g~~~ 42 (65)
T d2croa_ 19 QTELATKAGVKQQSIQLIEAGVTK 42 (65)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTCCS
T ss_pred HHHHHHHHCcCHhHHHHHHCCCCC
Confidence 578999999999999999876653
No 79
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}
Probab=35.51 E-value=24 Score=23.17 Aligned_cols=44 Identities=20% Similarity=0.203 Sum_probs=29.1
Q ss_pred CCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHhhCC--chhhhhhhhh
Q psy1901 41 TFTGDQLEELERAFQ-----RTQYPDVYTREELAQKTKL--TEARVQVWFS 84 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~-----~~~~ps~~~r~~LA~~l~l--~~~qV~~WFq 84 (205)
.++.+|+..|++.|. .+.+.+..+-..+...++. +...|+.+|+
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~ 52 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 52 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 378888888988884 3457787777777766653 4444544443
No 80
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=35.34 E-value=10 Score=22.08 Aligned_cols=23 Identities=26% Similarity=0.310 Sum_probs=19.6
Q ss_pred HHHHHHhhCCchhhhhhhhhchH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRR 87 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR 87 (205)
..+||+.+|++...|..|..+++
T Consensus 17 q~elA~~~gvs~~~is~~E~g~~ 39 (63)
T d1r69a_ 17 QAELAQKVGTTQQSIEQLENGKT 39 (63)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSC
T ss_pred HHHHHHHhCcCHHHHHHHHCCCC
Confidence 46799999999999999987654
No 81
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=34.89 E-value=9.3 Score=23.41 Aligned_cols=41 Identities=15% Similarity=0.201 Sum_probs=31.1
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRA 88 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~ 88 (205)
+....+.|....|-.. ...+||++.|++..-|-..|.||-.
T Consensus 13 l~aa~~l~~~~G~~~~-t~~~Ia~~agvs~~t~y~~F~sKe~ 53 (78)
T d2o7ta1 13 ITTTCNLYRTHHHDSL-TMENIAEQAGVGVATLYRNFPDRFT 53 (78)
T ss_dssp HHHHHHHHHHSCGGGC-CHHHHHHHHTCCHHHHHHHCSSHHH
T ss_pred HHHHHHHHHHhCcccc-CHHHHHHHhCCCHHHHHHHCcCHHH
Confidence 3445566777776544 4678999999999999999988743
No 82
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=34.50 E-value=14 Score=21.77 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=29.8
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRA 88 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~ 88 (205)
+..-.+.|....|=.. ....||+.+|++...+-.+|.||-.
T Consensus 6 l~aa~~l~~~~G~~~~-si~~Ia~~agvs~~t~Y~~F~sK~~ 46 (70)
T d2gena1 6 LQAALACFSEHGVDAT-TIEMIRDRSGASIGSLYHHFGNKER 46 (70)
T ss_dssp HHHHHHHHHHHCTTTC-CHHHHHHHHCCCHHHHHHHTCSHHH
T ss_pred HHHHHHHHHHhCcccC-CHHHHHHHHCcCHHHHHHHCCCHHH
Confidence 3444555666555443 3678899999999999999998754
No 83
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=34.49 E-value=12 Score=22.30 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=31.0
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
+..-.+.|....|-.. ...+||+.+|++...|-..|.||-.=
T Consensus 9 l~aa~~l~~~~G~~~~-t~~~Ia~~agvs~~t~Y~~F~~K~~L 50 (73)
T d1t56a1 9 LATAENLLEDRPLADI-SVDDLAKGAGISRPTFYFYFPSKEAV 50 (73)
T ss_dssp HHHHHHHHHHSCGGGC-CHHHHHHHHTCCHHHHHHHCSSHHHH
T ss_pred HHHHHHHHHHhCcccC-CHHHHHHHhCCCHHHHHHHCcCHHHH
Confidence 3444555777665433 36788999999999999999987643
No 84
>d2g3ba1 a.4.1.9 (A:2-73) Putative transcriptional regulator {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=34.40 E-value=10 Score=22.77 Aligned_cols=43 Identities=12% Similarity=0.132 Sum_probs=30.2
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHH
Q psy1901 48 EELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLR 91 (205)
Q Consensus 48 ~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~k 91 (205)
....+.|..+.| ..-....||++.|++..-|..+|.||..=..
T Consensus 9 ~aa~~l~~~~G~-~~~ti~~Ia~~agvs~~~ly~~F~~K~~L~~ 51 (72)
T d2g3ba1 9 KASATAIAQRGI-RGLRVNDVAEVAGVSPGLLYYHFKDRIGLLE 51 (72)
T ss_dssp HHHHHHHHHHHH-HHCCHHHHHHHHTSCHHHHHHHHCSHHHHHH
T ss_pred HHHHHHHHHhCc-ccCCHHHHHHHhCcCHHHHHHHCcCHHHHHH
Confidence 334444555442 3334678999999999999999999876443
No 85
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=34.36 E-value=15 Score=21.83 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=30.0
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 48 EELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 48 ~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
..-.+.|....|-. -...+||+.+|++...+-..|.||-.=
T Consensus 8 ~aa~~l~~~~G~~~-~s~~~Ia~~agvs~~~~y~~F~~K~~L 48 (71)
T d1jt6a1 8 GVAKELFIKNGYNA-TTTGEIVKLSESSKGNLYYHFKTKENL 48 (71)
T ss_dssp HHHHHHHHHHCTTT-CCHHHHHHHTTCCHHHHHHHHSSHHHH
T ss_pred HHHHHHHHHhCccc-cCHHHHHHHHCcCHhHHHHHCcCHHHH
Confidence 33445566666543 346788999999999999999997543
No 86
>d2vkva1 a.4.1.9 (A:6-67) Tetracyclin repressor (Tet-repressor, TetR) {Escherichia coli [TaxId: 562]}
Probab=34.27 E-value=10 Score=22.16 Aligned_cols=25 Identities=28% Similarity=0.310 Sum_probs=22.0
Q ss_pred HHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
..+||+.+|++...|-.+|.||..=
T Consensus 22 ~~~Ia~~agvs~~tiy~~F~~K~~L 46 (62)
T d2vkva1 22 TRKLAQKLGVEQPTLYWHVKNKRAL 46 (62)
T ss_dssp HHHHHHHHTSCHHHHHHHSCCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHCCCHHHH
Confidence 5789999999999999999987643
No 87
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=33.37 E-value=15 Score=21.93 Aligned_cols=42 Identities=14% Similarity=0.286 Sum_probs=30.7
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
+....+.|....|-... ...||+..|++..-|...|.||-.=
T Consensus 10 l~aa~~l~~~~G~~~~t-i~~Ia~~agvs~~t~y~~F~~K~~l 51 (72)
T d1pb6a1 10 LSAALDTFSQFGFHGTR-LEQIAELAGVSKTNLLYYFPSKEAL 51 (72)
T ss_dssp HHHHHHHHHHHCTTTCC-HHHHHHHTTSCHHHHHHHSSSHHHH
T ss_pred HHHHHHHHHHhCccccC-HHHHHHHhCCChHHHHHHCcCHHHH
Confidence 33444556666654443 6788999999999999999986543
No 88
>d2gqba1 a.282.1.1 (A:1-130) Hypothetical protein RPA2825 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=33.09 E-value=18 Score=24.97 Aligned_cols=29 Identities=21% Similarity=0.438 Sum_probs=22.8
Q ss_pred CCCCCHHHHHHHHHhhCCch-----hhhhhhhhc
Q psy1901 57 TQYPDVYTREELAQKTKLTE-----ARVQVWFSN 85 (205)
Q Consensus 57 ~~~ps~~~r~~LA~~l~l~~-----~qV~~WFqN 85 (205)
.--.+...|++||.+||++. .+..+|...
T Consensus 78 gLDSSL~aRKeLA~EL~y~gd~~dSA~mNiwLhk 111 (130)
T d2gqba1 78 DIDSSLSARKELAKELGYSGDMNDSASMNIWLHK 111 (130)
T ss_dssp CCCCSHHHHHHHHHHHTCCCSSCHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 34578899999999999873 467888863
No 89
>d2c5ra1 a.251.1.1 (A:66-129) Early protein gp16.7 {Bacteriophage phi-29 [TaxId: 10756]}
Probab=32.97 E-value=44 Score=19.60 Aligned_cols=53 Identities=13% Similarity=0.084 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHH
Q psy1901 42 FTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQL 94 (205)
Q Consensus 42 ~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~ 94 (205)
++.-...+|..+=+.+-.....-+++|..+---++..|-.+..|.|.-||-..
T Consensus 2 ls~~e~~vLDlYe~SnIrIP~DIIEdl~~~~L~te~EVmnYiEnqR~~WKLEN 54 (64)
T d2c5ra1 2 LSACEVAVLDLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQRTYWKLEN 54 (64)
T ss_dssp CCHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHcCCcCcHHHHHHHHHhhhhhHHHHHHHHHhhHhHHhhhh
Confidence 34556677877777788888888999988777789999999999999998763
No 90
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=32.51 E-value=10 Score=22.27 Aligned_cols=23 Identities=9% Similarity=0.316 Sum_probs=20.0
Q ss_pred HHHHHHhhCCchhhhhhhhhchH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRR 87 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR 87 (205)
..+||+.+|++...|..|-.+++
T Consensus 19 q~~lA~~~gvs~~~i~~~e~g~~ 41 (66)
T d2r1jl1 19 QAALGKMVGVSNVAISQWERSET 41 (66)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSS
T ss_pred HHHHHHHHCCCHHHHHHHHcCCC
Confidence 46799999999999999997764
No 91
>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.82 E-value=8.4 Score=25.98 Aligned_cols=29 Identities=7% Similarity=-0.041 Sum_probs=24.7
Q ss_pred CCCCCHHHHHHHHHhhCCchhhhhhhhhc
Q psy1901 57 TQYPDVYTREELAQKTKLTEARVQVWFSN 85 (205)
Q Consensus 57 ~~~ps~~~r~~LA~~l~l~~~qV~~WFqN 85 (205)
+...++++.++|.+.+++++.+|+.|++-
T Consensus 5 ~s~l~p~~l~~L~~~T~fs~~ei~~l~~~ 33 (118)
T d1tuza_ 5 RGLISPSDFAQLQKYMEYSTKKVSDVLKL 33 (118)
T ss_dssp CSCSCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 45678888999999999999999999853
No 92
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=31.42 E-value=12 Score=22.28 Aligned_cols=22 Identities=18% Similarity=0.194 Sum_probs=19.7
Q ss_pred HHHHHHhhCCchhhhhhhhhch
Q psy1901 65 REELAQKTKLTEARVQVWFSNR 86 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNr 86 (205)
..+||+.+|++...|..|..++
T Consensus 22 q~elA~~~gv~~~~is~ie~g~ 43 (69)
T d2a6ca1 22 QFKAAELLGVTQPRVSDLMRGK 43 (69)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCHhHHHHHHccc
Confidence 5689999999999999999765
No 93
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=31.27 E-value=18 Score=21.50 Aligned_cols=42 Identities=24% Similarity=0.347 Sum_probs=31.1
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
+....+.|....|-. -....||+..|++...|...|.||-.=
T Consensus 11 l~aa~~l~~~~G~~~-~t~~~Ia~~agvs~~~~y~~F~~k~~L 52 (75)
T d3c07a1 11 LETAMRLFQERGYDR-TTMRAIAQEAGVSVGNAYYYFAGKEHL 52 (75)
T ss_dssp HHHHHHHHHHTCSTT-CCHHHHHHHHTSCHHHHHHHCSSHHHH
T ss_pred HHHHHHHHHHhCccc-CCHHHHHHHHCcCHHHHHHHCcCHHHH
Confidence 344455677666433 446788999999999999999987644
No 94
>d2ppxa1 a.35.1.3 (A:30-91) Uncharacterized protein Atu1735 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=31.14 E-value=11 Score=22.13 Aligned_cols=24 Identities=17% Similarity=0.407 Sum_probs=21.1
Q ss_pred HHHHHHhhCCchhhhhhhhhchHH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRRA 88 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR~ 88 (205)
..+||+.+|++...|..|=.+++.
T Consensus 15 Q~elA~~lGvs~~tvs~~E~G~~~ 38 (62)
T d2ppxa1 15 QEEFSARYHIPLGTLRDWEQGRSE 38 (62)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSSC
T ss_pred HHHHHHHhCCCHHHHHHHHCCCCC
Confidence 468999999999999999988763
No 95
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=31.10 E-value=26 Score=20.58 Aligned_cols=35 Identities=6% Similarity=-0.082 Sum_probs=23.3
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhh
Q psy1901 46 QLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWF 83 (205)
Q Consensus 46 q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WF 83 (205)
+..+|+-......+.+. .+||+.|+++.+.|+.=+
T Consensus 9 ~~~Il~~L~~~~~~vs~---~~La~~l~VS~~TI~rdi 43 (65)
T d1j5ya1 9 LKSIVRILERSKEPVSG---AQLAEELSVSRQVIVQDI 43 (65)
T ss_dssp HHHHHHHHHHCSSCBCH---HHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcH---HHHHHHHCCCHHHHHHHH
Confidence 44555555554445554 578999999998876544
No 96
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Probab=30.92 E-value=46 Score=21.77 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHHH
Q psy1901 42 FTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRK 92 (205)
Q Consensus 42 ~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr 92 (205)
++..|+.+++-.|...- .-.+||..+|++..-|+.=...-+.+.+.
T Consensus 19 Lpe~QR~vl~L~~~e~l-----s~~EIA~~lgiS~~aV~~~l~Ra~~~L~~ 64 (106)
T d1xsva_ 19 LTNKQRNYLELFYLEDY-----SLSEIADTFNVSRQAVYDNIRRTGDLVED 64 (106)
T ss_dssp SCHHHHHHHHHHHTSCC-----CHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC-----cHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 67888888888775443 35789999999999998866544444433
No 97
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=30.68 E-value=18 Score=21.37 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=29.1
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 50 LERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 50 Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
-.+.|....|-... ..+||+..|++...|...|.||-.=
T Consensus 9 A~~lf~~~G~~~~t-i~~Ia~~agvs~~~~Y~~F~~K~~L 47 (69)
T d2i10a1 9 AMELFWRQGYEGTS-ITDLTKALGINPPSLYAAFGSKRDL 47 (69)
T ss_dssp HHHHHHHHTTTTCC-HHHHHHHHTCCHHHHHHHHCSHHHH
T ss_pred HHHHHHHHCcccCC-HHHHHHHhCCChhHHHHHCcCHHHH
Confidence 34556666654443 6788999999999999999887643
No 98
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.31 E-value=14 Score=22.35 Aligned_cols=42 Identities=17% Similarity=0.329 Sum_probs=30.5
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 48 EELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 48 ~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
....+.|....|-. -....||+.+|++..-|...|.+|..=.
T Consensus 11 ~aa~~~~~~~G~~~-~ti~~Ia~~agvs~~s~y~~F~~K~~l~ 52 (79)
T d2fbqa1 11 DAAEQLFAEKGFAE-TSLRLITSKAGVNLAAVNYHFGSKKALI 52 (79)
T ss_dssp HHHHHHHHHHCSTT-CCHHHHHHHHTSCHHHHHHHTCSHHHHH
T ss_pred HHHHHHHHHhCccc-ccHHHHHHHHCcChhHHHHHCcCHHHHH
Confidence 34445566666533 3477889999999999999999876543
No 99
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=30.23 E-value=10 Score=23.89 Aligned_cols=25 Identities=12% Similarity=0.208 Sum_probs=21.5
Q ss_pred HHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
..+||+.+|++...|..|-.++|.-
T Consensus 17 q~~LA~~lGvs~~~is~ie~g~~~~ 41 (87)
T d2icta1 17 LREFARAMEIAPSTASRLLTGKAAL 41 (87)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSSCC
T ss_pred HHHHHHHHhhcHHHHHHHHHhccCC
Confidence 4689999999999999999887653
No 100
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=30.20 E-value=11 Score=22.28 Aligned_cols=23 Identities=22% Similarity=0.198 Sum_probs=20.3
Q ss_pred HHHHHHhhCCchhhhhhhhhchH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRR 87 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR 87 (205)
..+||+.+|++...|..|-.+++
T Consensus 17 q~~la~~~gis~~~i~~~E~g~~ 39 (68)
T d1b0na2 17 LSELAEKAGVAKSYLSSIERNLQ 39 (68)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCHHHHHHHHcCCC
Confidence 56899999999999999998754
No 101
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=29.84 E-value=12 Score=22.73 Aligned_cols=24 Identities=25% Similarity=0.242 Sum_probs=20.2
Q ss_pred HHHHHHHhhCCchhhhhhhhhchH
Q psy1901 64 TREELAQKTKLTEARVQVWFSNRR 87 (205)
Q Consensus 64 ~r~~LA~~l~l~~~qV~~WFqNrR 87 (205)
...+||+.+|++...|..|..+++
T Consensus 25 tq~~lA~~~gis~~~i~~~e~g~~ 48 (77)
T d2b5aa1 25 SQEELADLAGLHRTYISEVERGDR 48 (77)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTCS
T ss_pred CHHHHHHHHCCCHHHHHHHHcCCC
Confidence 356789999999999999997654
No 102
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.66 E-value=51 Score=19.08 Aligned_cols=37 Identities=11% Similarity=0.162 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhh
Q psy1901 44 GDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 44 ~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFq 84 (205)
...+.+|+-. ..+.+.+. .+||+.||++.+-|....+
T Consensus 5 ~~~~~iL~~L-~~~~~~s~---~eLa~~l~vS~~ti~r~i~ 41 (63)
T d1biaa1 5 TVPLKLIALL-ANGEFHSG---EQLGETLGMSRAAINKHIQ 41 (63)
T ss_dssp HHHHHHHHHH-TTSSCBCH---HHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHH-HHCCcCCH---HHHHHHHCcCHHHHHHHHH
Confidence 4455566544 55667665 4899999999998876553
No 103
>d1gyxa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase homologue YdcE {Escherichia coli [TaxId: 562]}
Probab=28.66 E-value=25 Score=21.73 Aligned_cols=34 Identities=6% Similarity=0.174 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhh
Q psy1901 41 TFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFq 84 (205)
+|+.+|+..|-+.+ ...+++.+|+....|.|.|.
T Consensus 11 ~lT~EQK~~L~~~i----------T~a~~~~lg~~~e~V~V~i~ 44 (76)
T d1gyxa_ 11 ELDEQQKAALAADI----------TDVIIRHLNSKDSSISIALQ 44 (76)
T ss_dssp CCCHHHHHHHHHHH----------HHHHHHHHTCCGGGCEEEEE
T ss_pred CCCHHHHHHHHHHH----------HHHHHHHhCcCCCeEEEEEE
Confidence 47888888886554 45668888999999988884
No 104
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=28.64 E-value=14 Score=22.37 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=30.1
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 48 EELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 48 ~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
....+.|....|-.. ....||+.+|++...+-..|.||-.=.
T Consensus 13 ~aa~~l~~~~G~~~~-s~~~Ia~~agvs~~~lY~~F~~K~~L~ 54 (77)
T d2gfna1 13 DAVLALIAREGISAV-TTRAVAEESGWSTGVLNHYFGSRHELL 54 (77)
T ss_dssp HHHHHHHHHHCGGGC-CHHHHHHHHSSCHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHhCcccc-CHHHHHHHHCCCHHHHHHHCcCHHHHH
Confidence 344445666664333 367889999999999999999886543
No 105
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=28.15 E-value=15 Score=22.43 Aligned_cols=43 Identities=19% Similarity=0.403 Sum_probs=31.3
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
+....+.|....|-.. ...+||+..|++...+-..|.||-.=.
T Consensus 17 l~aa~~l~~~~G~~~~-ti~~Ia~~agvs~~t~Y~~F~~K~~L~ 59 (81)
T d1rkta1 17 LEAAKTVFKRKGFELT-TMKDVVEESGFSRGGVYLYFSSTEEMF 59 (81)
T ss_dssp HHHHHHHHHHHCSTTC-CHHHHHHHHTSCHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHhCcccC-CHHHHHHHhCcCHHHHHHHCcCHHHHH
Confidence 3344455666664433 477899999999999999999976543
No 106
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=27.96 E-value=14 Score=24.01 Aligned_cols=21 Identities=5% Similarity=0.104 Sum_probs=18.2
Q ss_pred HHHHHHHhhCCchhhhhhhhh
Q psy1901 64 TREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 64 ~r~~LA~~l~l~~~qV~~WFq 84 (205)
.+.++|+.+|++.+.|+.|=.
T Consensus 4 tI~e~A~~~gvs~~tlR~Ye~ 24 (109)
T d1r8da_ 4 QVKQVAEISGVSIRTLHHYDN 24 (109)
T ss_dssp CHHHHHHHHSCCHHHHHHHHH
T ss_pred cHHHHHHHHCcCHHHHHHHHH
Confidence 367899999999999999963
No 107
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.96 E-value=54 Score=19.13 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhh
Q psy1901 41 TFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQV 81 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~ 81 (205)
.++.++...|++....-+--+...=+.||..+|-+..+|..
T Consensus 3 eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~vgkt~~ev~~ 43 (59)
T d2cqqa1 3 EWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTT 43 (59)
T ss_dssp CCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHHCCCHHHHHH
Confidence 47899999999998776655555556778999877777654
No 108
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=27.61 E-value=15 Score=21.61 Aligned_cols=43 Identities=16% Similarity=0.191 Sum_probs=30.4
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
+....+.|....|-.. ....||+..|++..-|-..|.||-.=.
T Consensus 7 ~~aa~~l~~~~G~~~~-ti~~Ia~~agvs~~~iy~~F~sK~~L~ 49 (69)
T d2np5a1 7 AAALFDVAAESGLEGA-SVREVAKRAGVSIGAVQHHFSTKDEMF 49 (69)
T ss_dssp HHHHHHHHHHHCGGGC-CHHHHHHHHTCCHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHhCcccc-CHHHHHHHhCCCHHHHHHHCcCHHHHH
Confidence 3344555655554333 367889999999999999999886543
No 109
>d2hbka1 a.60.8.4 (A:421-516) Exosome complex exonuclease RRP6 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.83 E-value=40 Score=21.20 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=24.5
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhh
Q psy1901 39 RTTFTGDQLEELERAFQRTQYPDVYTREELAQKTKLTEARV 79 (205)
Q Consensus 39 R~~~s~~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV 79 (205)
+..+++.|+.+|++.+ ..|.++|...++....|
T Consensus 11 ~~~l~~~~~~l~~~L~--------~wR~~~Ar~~d~~~~~V 43 (96)
T d2hbka1 11 QYNIPPEREVLVRELY--------QWRDLIARRDDESPRFV 43 (96)
T ss_dssp CSSCCGGGHHHHHHHH--------HHHHHHHHHHTCCHHHH
T ss_pred cccCCHHHHHHHHHHH--------HHHHHHHHHhCCCceee
Confidence 4468889999999887 66777887777666443
No 110
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=26.80 E-value=20 Score=21.57 Aligned_cols=44 Identities=18% Similarity=0.337 Sum_probs=32.0
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLR 91 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~k 91 (205)
+....+.|....|-... ..+||+..|++..-|-..|.||..=..
T Consensus 10 l~aa~~l~~~~G~~~~s-i~~Ia~~agvs~~~~Y~~F~~K~~L~~ 53 (73)
T d2fx0a1 10 LKAAKKKFGERGYEGTS-IQEIAKEAKVNVAMASYYFNGKENLYY 53 (73)
T ss_dssp HHHHHHHHHHHCTTTCC-HHHHHHHHTSCHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHHHhCcccCc-HHHHHHHHCcChhHHHHHCcCHHHHHH
Confidence 34455567666654443 678899999999999999998865433
No 111
>d1t33a1 a.4.1.9 (A:1-88) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=26.22 E-value=13 Score=23.12 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=29.7
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 48 EELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 48 ~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
..-.+.|....| .. ...+||+..|++..-|-..|.||-.=
T Consensus 19 ~aa~~l~~~~G~-~~-t~~~Ia~~agvs~~~~Y~~F~sK~~L 58 (88)
T d1t33a1 19 AAALAQFGEYGL-HA-TTRDIAALAGQNIAAITYYFGSKEDL 58 (88)
T ss_dssp HHHHHHHHHHGG-GS-CHHHHHHHHTSCHHHHHHHHSSHHHH
T ss_pred HHHHHHHHHhcc-cc-CHHHHHHHhCCChhhhhccCCCHHHH
Confidence 334445767777 33 35689999999999999999987543
No 112
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=26.03 E-value=16 Score=24.09 Aligned_cols=21 Identities=5% Similarity=0.115 Sum_probs=18.2
Q ss_pred HHHHHHHhhCCchhhhhhhhh
Q psy1901 64 TREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 64 ~r~~LA~~l~l~~~qV~~WFq 84 (205)
.+.++|+.+||+.+.|+.|=.
T Consensus 5 tI~evA~~~gvs~~tlR~Ye~ 25 (118)
T d1r8ea1 5 SIGEVSKLANVSIKALRYYDK 25 (118)
T ss_dssp EHHHHHHHHTCCHHHHHHHHH
T ss_pred cHHHHHHHHCcCHHHHHHHHH
Confidence 367899999999999999964
No 113
>d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
Probab=25.81 E-value=11 Score=23.17 Aligned_cols=27 Identities=11% Similarity=0.166 Sum_probs=22.6
Q ss_pred HHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 63 YTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 63 ~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
.-+..++++.|+...+++.+|.+++..
T Consensus 28 ~l~~~~~~~~~i~~~~~~l~f~G~~l~ 54 (79)
T d1euvb_ 28 RLMEAFAKRQGKEMDSLRFLYDGIRIQ 54 (79)
T ss_dssp HHHHHHHHHTTCCGGGEEEEETTEECC
T ss_pred HHHHHHHHHhCCChHhEEEEECCEEeC
Confidence 446677999999999999999887764
No 114
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.79 E-value=25 Score=24.51 Aligned_cols=29 Identities=34% Similarity=0.457 Sum_probs=24.4
Q ss_pred CCCCCHHHHHHHHHhhCCchhhhhhhhhc
Q psy1901 57 TQYPDVYTREELAQKTKLTEARVQVWFSN 85 (205)
Q Consensus 57 ~~~ps~~~r~~LA~~l~l~~~qV~~WFqN 85 (205)
|...+.+....|++++.+++.+|+.||..
T Consensus 2 nskl~~e~i~~l~~~t~fs~~Ei~~l~~~ 30 (187)
T d1g8ia_ 2 NSKLKPEVVEELTRKTYFTEKEVQQWYKG 30 (187)
T ss_dssp CCSCCHHHHHHHHHTSSSCHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 45677888999999999999999999853
No 115
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=25.22 E-value=20 Score=21.10 Aligned_cols=41 Identities=12% Similarity=0.252 Sum_probs=29.9
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 48 EELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 48 ~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
..-.+.|....|-... ...||+..|+++.-+-..|.||..=
T Consensus 9 ~aa~~l~~~~G~~~~t-i~~Ia~~agvs~~~~Y~~F~~K~~l 49 (68)
T d2d6ya1 9 EAAVAEFARHGIAGAR-IDRIAAEARANKQLIYAYYGNKGEL 49 (68)
T ss_dssp HHHHHHHHHHTTTSCC-HHHHHHHHTCCHHHHHHHHSSHHHH
T ss_pred HHHHHHHHHhCccccC-HHHHHHHHCcchhHHHHHCcCHHHH
Confidence 3344556666654443 6788999999999999999988543
No 116
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}
Probab=25.12 E-value=5.6 Score=25.15 Aligned_cols=44 Identities=9% Similarity=0.194 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHhhC--Cchhhhhhhhh
Q psy1901 41 TFTGDQLEELERAFQ-----RTQYPDVYTREELAQKTK--LTEARVQVWFS 84 (205)
Q Consensus 41 ~~s~~q~~~Le~~F~-----~~~~ps~~~r~~LA~~l~--l~~~qV~~WFq 84 (205)
.++.+|+..|.+.|. ...+.+..+...+.+.+| +++.+|+..|+
T Consensus 16 ~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~ 66 (87)
T d1s6ja_ 16 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMD 66 (87)
T ss_dssp SSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 456666666766663 346889999999888887 66777777763
No 117
>d2np3a1 a.4.1.9 (A:35-99) Putative transcriptional regulator SCO0857 {Streptomyces coelicolor [TaxId: 1902]}
Probab=25.01 E-value=11 Score=22.35 Aligned_cols=40 Identities=8% Similarity=0.237 Sum_probs=7.4
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 50 LERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 50 Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
-.+.|.+..|-... ..+||+..|+++.-|-..|.||..=.
T Consensus 5 A~~l~~~~G~~~~s-~~~IA~~agvs~~~ly~~F~sK~~L~ 44 (65)
T d2np3a1 5 ARVCFAERGFDATS-LRRIAETAGVDQSLVHHFYGTKENLF 44 (65)
T ss_dssp HHHHC----------------------------CCC-CHHH
T ss_pred HHHHHHHHCcccCC-HHHHHHHHCcCHHHHHHHCCCHHHHH
Confidence 34556666655444 66789999999999999999886543
No 118
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.84 E-value=28 Score=23.94 Aligned_cols=29 Identities=21% Similarity=0.383 Sum_probs=24.2
Q ss_pred CCCCCHHHHHHHHHhhCCchhhhhhhhhc
Q psy1901 57 TQYPDVYTREELAQKTKLTEARVQVWFSN 85 (205)
Q Consensus 57 ~~~ps~~~r~~LA~~l~l~~~qV~~WFqN 85 (205)
|...+.+...+|.+.+++++.+|+.||..
T Consensus 1 ~s~l~~~~~~~L~~~t~fs~~ei~~l~~~ 29 (181)
T d1bjfa_ 1 NSKLRPEVMQDLLESTDFTEHEIQEWYKG 29 (181)
T ss_dssp CCCCCHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 34567888999999999999999998753
No 119
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=24.81 E-value=17 Score=21.88 Aligned_cols=41 Identities=12% Similarity=0.164 Sum_probs=29.0
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 48 EELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 48 ~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
....+.|....|-. -....||+.+|++...|-..|.||-.=
T Consensus 12 ~aa~~l~~~~G~~~-~t~~~Ia~~agvs~~~~Y~~F~~K~~L 52 (75)
T d2hyja1 12 GRAAEIASEEGLDG-ITIGRLAEELEMSKSGVHKHFGTKETL 52 (75)
T ss_dssp HHHHHHHHHHCGGG-CCHHHHHHHHTCCHHHHHTTCSSHHHH
T ss_pred HHHHHHHHHhCccc-CcHHHHHHHHCcCHHHHHHHCcCHHHH
Confidence 34444455555432 336788999999999999999988653
No 120
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.64 E-value=33 Score=17.76 Aligned_cols=30 Identities=23% Similarity=0.398 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHhhcCC--CCCHHHHHHHHHhh
Q psy1901 43 TGDQLEELERAFQRTQ--YPDVYTREELAQKT 72 (205)
Q Consensus 43 s~~q~~~Le~~F~~~~--~ps~~~r~~LA~~l 72 (205)
+.+.+..+-+.|.+|. |.+.++-.++.+..
T Consensus 2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~t 33 (34)
T d1ctda_ 2 SEEELANAFRIFDKNADGYIDIEELGEILRAT 33 (34)
T ss_dssp HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence 3566777777887774 89888777765543
No 121
>d1yt3a1 a.60.8.3 (A:194-294) Ribonuclease D {Escherichia coli [TaxId: 562]}
Probab=24.55 E-value=48 Score=20.88 Aligned_cols=15 Identities=20% Similarity=0.016 Sum_probs=12.3
Q ss_pred CCCCHHHHHHHHHHh
Q psy1901 40 TTFTGDQLEELERAF 54 (205)
Q Consensus 40 ~~~s~~q~~~Le~~F 54 (205)
..++..|+.+|++.+
T Consensus 14 ~~L~~~~l~~l~~L~ 28 (101)
T d1yt3a1 14 WQLRTRQLACLQLLA 28 (101)
T ss_dssp GGSCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHH
Confidence 347899999999886
No 122
>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=24.38 E-value=27 Score=23.39 Aligned_cols=34 Identities=12% Similarity=0.336 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHhhc-----C--CCCCHHHHHHHHHhhCCc
Q psy1901 42 FTGDQLEELERAFQR-----T--QYPDVYTREELAQKTKLT 75 (205)
Q Consensus 42 ~s~~q~~~Le~~F~~-----~--~~ps~~~r~~LA~~l~l~ 75 (205)
+|.+|+..|.+.|.. + .+.+..+...+.+.||+.
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~ 41 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN 41 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccC
Confidence 578899999888741 3 478888888888888854
No 123
>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.99 E-value=48 Score=21.76 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHhhc-----CCCCCHHHHHHHHHhhCCc
Q psy1901 42 FTGDQLEELERAFQR-----TQYPDVYTREELAQKTKLT 75 (205)
Q Consensus 42 ~s~~q~~~Le~~F~~-----~~~ps~~~r~~LA~~l~l~ 75 (205)
|+.+|+..|++.|.. +.+.+..+...+...||..
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~ 39 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRL 39 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCC
Confidence 678899999999853 5688888888888888744
No 124
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=23.95 E-value=45 Score=19.01 Aligned_cols=19 Identities=16% Similarity=0.122 Sum_probs=15.2
Q ss_pred HHHHHHhhCCchhhhhhhh
Q psy1901 65 REELAQKTKLTEARVQVWF 83 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WF 83 (205)
..+||+.|||+...|..-+
T Consensus 34 ~~EiA~~l~~~~e~V~~~l 52 (57)
T d1l0oc_ 34 VTEIADHLGISPEDVVLAQ 52 (57)
T ss_dssp HHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHH
Confidence 4588999999999886543
No 125
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.32 E-value=11 Score=21.25 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=20.7
Q ss_pred CCCCHHHHHHHHHhhCCchhhhhhhhh
Q psy1901 58 QYPDVYTREELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 58 ~~ps~~~r~~LA~~l~l~~~qV~~WFq 84 (205)
.+-..-...+||+.+||+...+..=|+
T Consensus 15 ~~~~~itl~~lA~~~~~S~~~l~r~Fk 41 (54)
T d1d5ya1 15 HLDQPLSLDNVAAKAGYSKWHLQRMFK 41 (54)
T ss_dssp TSSSSCCCHHHHTTTSSCHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHCcCHHHHHHHHH
Confidence 344445667999999999999887774
No 126
>d1ic8a2 a.35.1.1 (A:87-180) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.27 E-value=43 Score=21.63 Aligned_cols=46 Identities=9% Similarity=0.190 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhh-hchHHHHHHH
Q psy1901 45 DQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWF-SNRRARLRKQ 93 (205)
Q Consensus 45 ~q~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WF-qNrR~k~kr~ 93 (205)
..+..+-+.|..+...+-. .+|..+||+..-|-.|+ ++..++..|+
T Consensus 27 ~~v~~~IK~Fl~~h~I~Q~---~Va~~TGlsQS~iSq~L~~g~~M~~~KR 73 (94)
T d1ic8a2 27 WRVAKMVKSYLQQHNIPQR---EVVDTTGLNQSHLSQHLNKGTPMKTQKR 73 (94)
T ss_dssp HHHHHHHHHHHHHTTCCHH---HHHHHHCCCHHHHHHHHHSBCCCCHHHH
T ss_pred HHHHHHHHHHHHHcCCcHH---HHHHHHcccHHHHHHHHhCCCCccHHHH
Confidence 3344444455555544433 56888899999999998 5555555554
No 127
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=22.25 E-value=50 Score=19.67 Aligned_cols=39 Identities=23% Similarity=0.353 Sum_probs=24.9
Q ss_pred CCCHHHHHHHH---HHhhcCCCCCHHHHHHHHHhhCC-chhhhhh
Q psy1901 41 TFTGDQLEELE---RAFQRTQYPDVYTREELAQKTKL-TEARVQV 81 (205)
Q Consensus 41 ~~s~~q~~~Le---~~F~~~~~ps~~~r~~LA~~l~l-~~~qV~~ 81 (205)
.+|+.|..+|+ +++..+.||.. ..+||+.+|+ +...|..
T Consensus 2 ~LT~rQ~~vL~~I~~~~~~~G~~Ps--~rei~~~~g~~S~stv~~ 44 (71)
T d1jhfa1 2 ALTARQQEVFDLIRDHISQTGMPPT--RAEIAQRLGFRSPNAAEE 44 (71)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCCC--HHHHHHHTTCSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCC--HHHHHHHcCCCCHHHHHH
Confidence 36777776665 45677776443 3467889998 4555544
No 128
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=21.66 E-value=21 Score=21.11 Aligned_cols=42 Identities=12% Similarity=0.045 Sum_probs=30.6
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhCCchhhhhhhhhchHHH
Q psy1901 47 LEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 89 (205)
Q Consensus 47 ~~~Le~~F~~~~~ps~~~r~~LA~~l~l~~~qV~~WFqNrR~k 89 (205)
+....+.|....|-. -...+||+++|++..-+-..|.||-.=
T Consensus 9 l~aa~~l~~~~G~~~-~t~~~Ia~~agvs~~slY~yF~~k~~L 50 (72)
T d1zk8a1 9 VETAAEIADANGVQE-VTLASLAQTLGVRSPSLYNHVKGLQDV 50 (72)
T ss_dssp HHHHHHHHHHHCGGG-CCHHHHHHHHTSCHHHHTTTCSSHHHH
T ss_pred HHHHHHHHHHhCCCc-ccHHHHHHHhCCCHHHHHHHCcCHHHH
Confidence 344556666666433 346788999999999999999987543
No 129
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=21.55 E-value=23 Score=21.12 Aligned_cols=26 Identities=19% Similarity=0.411 Sum_probs=22.3
Q ss_pred HHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 65 REELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
...||+.+|++...|...|.+|-.=.
T Consensus 26 i~~Ia~~agvs~~~iY~~F~~k~~Ll 51 (75)
T d2id6a1 26 TDEIAEKAGVAKGLIFHYFKNKEELY 51 (75)
T ss_dssp HHHHHHHHTCCTHHHHHHHSSHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHCCCHHHHH
Confidence 67899999999999999999876443
No 130
>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.11 E-value=17 Score=23.81 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=35.5
Q ss_pred CCCCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHhhCCchhhhhhhh
Q psy1901 39 RTTFTGDQLEELERAFQ-----RTQYPDVYTREELAQKTKLTEARVQVWF 83 (205)
Q Consensus 39 R~~~s~~q~~~Le~~F~-----~~~~ps~~~r~~LA~~l~l~~~qV~~WF 83 (205)
...++++++..+++.|. .+.+.+..+...+-.+.||....++..+
T Consensus 13 ~~~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw 62 (110)
T d1iq3a_ 13 PWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIW 62 (110)
T ss_dssp SCCCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHH
Confidence 35789999999999994 3457888888888888899988877544
No 131
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=20.63 E-value=23 Score=23.55 Aligned_cols=20 Identities=20% Similarity=0.273 Sum_probs=17.6
Q ss_pred HHHHHHhhCCchhhhhhhhh
Q psy1901 65 REELAQKTKLTEARVQVWFS 84 (205)
Q Consensus 65 r~~LA~~l~l~~~qV~~WFq 84 (205)
+.++|+.+|++.+.|+.|=+
T Consensus 3 Ige~A~~~gvs~~TlR~Ye~ 22 (127)
T d1q06a_ 3 ISDVAKITGLTSKAIRFYEE 22 (127)
T ss_dssp HHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHH
Confidence 57899999999999999964
No 132
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Escherichia coli [TaxId: 562]}
Probab=20.11 E-value=87 Score=22.16 Aligned_cols=47 Identities=0% Similarity=-0.062 Sum_probs=34.6
Q ss_pred CHHHHHHHHHhhCCchhhhhhhhhchHHHHHHHHhHHHhhhhccccc
Q psy1901 61 DVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFNSMSL 107 (205)
Q Consensus 61 s~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~~~~~~~~~s~~~ 107 (205)
+...+..|+...||...++...+.....+.+-++.......+...+.
T Consensus 5 s~~~i~~~~~~~Gld~~~f~~~~~s~~~~~~v~~~~~~a~~~gi~Gt 51 (195)
T d1un2a_ 5 SASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGV 51 (195)
T ss_dssp SHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSS
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHcCHHHHHHHHHHHHHHHHhCCCcC
Confidence 56778899999999999999999887777666555554444444333
No 133
>d2g7ga1 a.4.1.9 (A:9-73) Putative transcriptional regulator Rha04620 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=20.07 E-value=24 Score=20.68 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=23.0
Q ss_pred HHHHHHHhhCCchhhhhhhhhchHHHH
Q psy1901 64 TREELAQKTKLTEARVQVWFSNRRARL 90 (205)
Q Consensus 64 ~r~~LA~~l~l~~~qV~~WFqNrR~k~ 90 (205)
....||+.+|++...|-..|.||..=.
T Consensus 21 ti~~Ia~~agvs~~~iY~~F~~K~~L~ 47 (65)
T d2g7ga1 21 RMPDLARHLNVQVSSIYHHAKGRAAVV 47 (65)
T ss_dssp CHHHHHHHTTSCHHHHHTTSCHHHHHH
T ss_pred CHHHHHHHhCccccchhhcCCCHHHHH
Confidence 367899999999999999999886543
Done!