AmiGO: BLAST Results


BLAST match view associations BLAST with gsb-n gsb-n gsb-n gooseberry-neuro	protein from Drosophila melanogaster	5.4e-53
BLAST match view associations BLAST with pax7a pax7a pax7a paired box gene 7a	gene_product from Danio rerio	6.1e-53
BLAST match view associations BLAST with prd prd prd paired	protein from Drosophila melanogaster	8.0e-53
BLAST match view associations BLAST with pax3 pax3 pax3 Paired box protein Pax-3	protein from Xenopus (Silurana) tropicalis	1.9e-44
BLAST match view associations BLAST with PAX6 PAX6 PAX6 Paired box protein Pax-6	protein from Gallus gallus	4.3e-38
BLAST match view associations BLAST with pax6b pax6b pax6b paired box gene 6b	gene_product from Danio rerio	1.1e-37
BLAST match view associations BLAST with Gga.30541 Gga.30541 Gga.30541 Uncharacterized protein	protein from Gallus gallus	4.0e-37
BLAST match view associations BLAST with vab-3 vab-3 vab-3	gene from Caenorhabditis elegans	2.4e-36
BLAST match view associations BLAST with vab-3 vab-3 vab-3 Protein VAB-3, isoform a	protein from Caenorhabditis elegans	2.4e-36
BLAST match view associations BLAST with toy toy toy twin of eyeless	protein from Drosophila melanogaster	5.5e-36
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Uncharacterized protein	protein from Gallus gallus	8.1e-35
BLAST match view associations BLAST with PAX5 PAX5 PAX5 B cell specific activator protein variant A delta 5	protein from Homo sapiens	8.1e-35
BLAST match view associations BLAST with PAX5 PAX5 PAX5 B cell specific activator protein variant A delta 5/9	protein from Homo sapiens	8.1e-35
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Paired box protein Pax-2	protein from Homo sapiens	1.1e-33
BLAST match view associations BLAST with pax6a pax6a pax6a paired box gene 6a	gene_product from Danio rerio	1.7e-33
BLAST match view associations BLAST with pax2a pax2a pax2a paired box gene 2a	gene_product from Danio rerio	6.2e-33
BLAST match view associations BLAST with pax8 pax8 pax8 Paired box protein Pax-8	protein from Xenopus laevis	2.6e-32
BLAST match view associations BLAST with pax8 pax8 pax8 Paired box protein Pax-8	protein from Xenopus (Silurana) tropicalis	3.3e-32
BLAST match view associations BLAST with Pax8 Pax8 Pax8 paired box gene 8	protein from Mus musculus	5.2e-32
BLAST match view associations BLAST with gsb gsb gsb gooseberry	protein from Drosophila melanogaster	6.0e-32
BLAST match view associations BLAST with pax2-a pax2-a pax2-a Paired box protein Pax-2-A	protein from Xenopus laevis	7.7e-32
BLAST match view associations BLAST with pax2b pax2b pax2b paired box gene 2b	gene_product from Danio rerio	8.8e-32
BLAST match view associations BLAST with Pax8 Pax8 Pax8 paired box 8	gene from Rattus norvegicus	1.1e-31
BLAST match view associations BLAST with PAX8 PAX8 PAX8 Paired box protein Pax-8	protein from Homo sapiens	1.3e-31
BLAST match view associations BLAST with PAX8 PAX8 PAX8 Paired box protein Pax-8	protein from Canis lupus familiaris	1.9e-31
BLAST match view associations BLAST with pax2-b pax2-b pax2-b Paired box protein Pax-2-B	protein from Xenopus laevis	2.1e-31
BLAST match view associations BLAST with I3LAG7 I3LAG7 I3LAG7 Uncharacterized protein	protein from Sus scrofa	1.1e-30
BLAST match view associations BLAST with PAX3 PAX3 PAX3 Uncharacterized protein	protein from Bos taurus	1.1e-30
BLAST match view associations BLAST with PAX3 PAX3 PAX3 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-30
BLAST match view associations BLAST with PAX3 PAX3 PAX3 Paired box protein Pax-3	protein from Homo sapiens	1.1e-30
BLAST match view associations BLAST with Pax3 Pax3 Pax3 paired box gene 3	protein from Mus musculus	1.1e-30
BLAST match view associations BLAST with pax3-b pax3-b pax3-b Paired box protein Pax-3-B	protein from Xenopus laevis	1.1e-30
BLAST match view associations BLAST with PAX8 PAX8 PAX8 Uncharacterized protein	protein from Bos taurus	1.2e-30
BLAST match view associations BLAST with Pax7 Pax7 Pax7 paired box gene 7	protein from Mus musculus	1.5e-30
BLAST match view associations BLAST with Pax7 Pax7 Pax7 paired box 7	gene from Rattus norvegicus	1.5e-30
BLAST match view associations BLAST with PAX8 PAX8 PAX8 Paired box protein Pax-8	protein from Pongo abelii	1.7e-30
BLAST match view associations BLAST with PAX7 PAX7 PAX7 Uncharacterized protein	protein from Bos taurus	2.1e-30
BLAST match view associations BLAST with PAX7 PAX7 PAX7 Uncharacterized protein	protein from Canis lupus familiaris	2.1e-30
BLAST match view associations BLAST with Pax-7 Pax-7 Pax-7 PAX7 protein	protein from Gallus gallus	2.2e-30
BLAST match view associations BLAST with PAX7 PAX7 PAX7 Paired box protein Pax-7	protein from Homo sapiens	2.7e-30
BLAST match view associations BLAST with pax7b pax7b pax7b paired box gene 7b	gene_product from Danio rerio	1.1e-29
BLAST match view associations BLAST with pax3b pax3b pax3b paired box gene 3b	gene_product from Danio rerio	1.8e-29
BLAST match view associations BLAST with pax3-a pax3-a pax3-a Paired box protein Pax-3-A	protein from Xenopus laevis	2.0e-29
BLAST match view associations BLAST with pax3a pax3a pax3a paired box gene 3a	gene_product from Danio rerio	7.1e-29
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Uncharacterized protein	protein from Bos taurus	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Uncharacterized protein	protein from Canis lupus familiaris	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Uncharacterized protein	protein from Canis lupus familiaris	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 B cell specific activator protein variant A delta 8/9	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Paired box protein Pax-5	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Paired box protein Pax-5	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Paired box protein Pax-5	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Paired box protein Pax-5	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with LOC100738189 LOC100738189 LOC100738189 Uncharacterized protein	protein from Sus scrofa	2.8e-27
BLAST match view associations BLAST with Pax5 Pax5 Pax5 paired box gene 5	protein from Mus musculus	2.8e-27
BLAST match view associations BLAST with pax5 pax5 pax5 Paired box protein Pax-5	protein from Xenopus laevis	9.4e-27
BLAST match view associations BLAST with pax8 pax8 pax8 paired box gene 8	gene_product from Danio rerio	9.4e-27
BLAST match view associations BLAST with F1SML3 F1SML3 F1SML3 Uncharacterized protein	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with I3LEF5 I3LEF5 I3LEF5 Uncharacterized protein	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with F1NEQ7 F1NEQ7 F1NEQ7 Uncharacterized protein	protein from Gallus gallus	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Uncharacterized protein	protein from Bos taurus	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Uncharacterized protein	protein from Canis lupus familiaris	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Uncharacterized protein	protein from Canis lupus familiaris	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Paired box protein Pax-2	protein from Homo sapiens	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Paired box protein Pax-2	protein from Homo sapiens	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Paired box protein Pax-2	protein from Homo sapiens	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Uncharacterized protein	protein from Sus scrofa	1.9e-26
BLAST match view associations BLAST with pax2 pax2 pax2 Paired box 2	protein from Ovis aries	1.9e-26
BLAST match view associations BLAST with Pax2 Pax2 Pax2 paired box gene 2	protein from Mus musculus	1.9e-26
BLAST match view associations BLAST with Pax2 Pax2 Pax2 paired box 2	gene from Rattus norvegicus	1.9e-26
BLAST match view associations BLAST with pax5 pax5 pax5 paired box gene 5	gene_product from Danio rerio	8.4e-26
BLAST match view associations BLAST with PAX4 PAX4 PAX4 Uncharacterized protein	protein from Bos taurus	2.1e-25
BLAST match view associations BLAST with I3LUF8 I3LUF8 I3LUF8 Uncharacterized protein	protein from Sus scrofa	2.2e-25
BLAST match view associations BLAST with pax1a pax1a pax1a paired box 1a	gene_product from Danio rerio	2.2e-25
BLAST match view associations BLAST with PAX4 PAX4 PAX4 Uncharacterized protein	protein from Canis lupus familiaris	4.4e-25
BLAST match view associations BLAST with PAX1 PAX1 PAX1 Paired box protein Pax-1	protein from Gallus gallus	4.6e-25
BLAST match view associations BLAST with Pax1 Pax1 Pax1 paired box 1	gene from Rattus norvegicus	4.6e-25
BLAST match view associations BLAST with pax9 pax9 pax9 paired box gene 9	gene_product from Danio rerio	4.6e-25
BLAST match view associations BLAST with pax1b pax1b pax1b paired box 1b	gene_product from Danio rerio	5.9e-25
BLAST match view associations BLAST with Pax4 Pax4 Pax4 paired box 4	gene from Rattus norvegicus	6.8e-25
BLAST match view associations BLAST with Pax1 Pax1 Pax1 paired box gene 1	protein from Mus musculus	8.2e-25
BLAST match view associations BLAST with Pax4 Pax4 Pax4 paired box gene 4	protein from Mus musculus	9.0e-25
BLAST match view associations BLAST with PAX1 PAX1 PAX1 Uncharacterized protein	protein from Bos taurus	9.1e-25
BLAST match view associations BLAST with PAX4 PAX4 PAX4 Paired box protein Pax-4	protein from Homo sapiens	9.9e-25
BLAST match view associations BLAST with PAX4 PAX4 PAX4 Paired box protein Pax-4	protein from Homo sapiens	1.0e-24
BLAST match view associations BLAST with PAX1 PAX1 PAX1 Uncharacterized protein	protein from Sus scrofa	1.1e-24
BLAST match view associations BLAST with PAX9 PAX9 PAX9 Paired box protein Pax-9	protein from Gallus gallus	1.2e-24
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy1904
        (163 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0001147 - symbol:gsb-n "gooseberry-neuro" species:...   344  5.4e-53   2
ZFIN|ZDB-GENE-990415-201 - symbol:pax7a "paired box gene ...   336  6.1e-53   2
FB|FBgn0003145 - symbol:prd "paired" species:7227 "Drosop...   350  8.0e-53   2
UNIPROTKB|Q28DP6 - symbol:pax3 "Paired box protein Pax-3"...   272  1.9e-44   2
UNIPROTKB|F1NUP3 - symbol:F1NUP3 "Uncharacterized protein...   234  4.5e-39   2
UNIPROTKB|F1NF66 - symbol:PAX6 "Paired box protein Pax-6"...   261  4.3e-38   2
ZFIN|ZDB-GENE-001031-1 - symbol:pax6b "paired box gene 6b...   259  1.1e-37   2
UNIPROTKB|F1NXF7 - symbol:PAX6 "Paired box protein Pax-6"...   403  1.5e-37   1
UNIPROTKB|E1C2N6 - symbol:E1C2N6 "Uncharacterized protein...   221  4.0e-37   2
WB|WBGene00006870 - symbol:vab-3 species:6239 "Caenorhabd...   258  2.4e-36   2
UNIPROTKB|G5EDS1 - symbol:vab-3 "Protein VAB-3, isoform a...   258  2.4e-36   2
FB|FBgn0019650 - symbol:toy "twin of eyeless" species:722...   250  5.5e-36   2
UNIPROTKB|F1NYH7 - symbol:F1NYH7 "Uncharacterized protein...   379  5.1e-35   1
UNIPROTKB|F1NKU4 - symbol:PAX5 "Uncharacterized protein" ...   306  8.1e-35   2
UNIPROTKB|F1NKV2 - symbol:PAX5 "Uncharacterized protein" ...   306  8.1e-35   2
UNIPROTKB|C0KTF7 - symbol:PAX5 "Paired box protein Pax-5"...   306  8.1e-35   2
UNIPROTKB|C0KTF8 - symbol:PAX5 "B cell specific activator...   306  8.1e-35   2
UNIPROTKB|F1NXF3 - symbol:PAX6 "Paired box protein Pax-6"...   226  7.2e-34   2
UNIPROTKB|G3V5S4 - symbol:PAX2 "Paired box protein Pax-2"...   298  1.1e-33   2
ZFIN|ZDB-GENE-990415-200 - symbol:pax6a "paired box gene ...   224  1.7e-33   2
ZFIN|ZDB-GENE-990415-8 - symbol:pax2a "paired box gene 2a...   299  6.2e-33   2
UNIPROTKB|Q9PUK5 - symbol:pax8 "Paired box protein Pax-8"...   298  2.6e-32   2
UNIPROTKB|A0JMA6 - symbol:pax8 "Paired box protein Pax-8"...   298  3.3e-32   2
MGI|MGI:97492 - symbol:Pax8 "paired box gene 8" species:1...   298  5.2e-32   2
FB|FBgn0001148 - symbol:gsb "gooseberry" species:7227 "Dr...   350  6.0e-32   1
UNIPROTKB|O57685 - symbol:pax2-a "Paired box protein Pax-...   298  7.7e-32   2
ZFIN|ZDB-GENE-001030-4 - symbol:pax2b "paired box gene 2b...   295  8.8e-32   2
RGD|620434 - symbol:Pax8 "paired box 8" species:10116 "Ra...   298  1.1e-31   2
UNIPROTKB|Q06710 - symbol:PAX8 "Paired box protein Pax-8"...   298  1.3e-31   2
UNIPROTKB|P47240 - symbol:PAX8 "Paired box protein Pax-8"...   298  1.9e-31   2
UNIPROTKB|O57682 - symbol:pax2-b "Paired box protein Pax-...   295  2.1e-31   2
UNIPROTKB|I3LAG7 - symbol:PAX3 "Uncharacterized protein" ...   338  1.1e-30   1
UNIPROTKB|F1MTX0 - symbol:PAX3 "Uncharacterized protein" ...   338  1.1e-30   1
UNIPROTKB|E2QX72 - symbol:PAX3 "Uncharacterized protein" ...   338  1.1e-30   1
UNIPROTKB|P23760 - symbol:PAX3 "Paired box protein Pax-3"...   338  1.1e-30   1
MGI|MGI:97487 - symbol:Pax3 "paired box gene 3" species:1...   338  1.1e-30   1
UNIPROTKB|F1LMV3 - symbol:Pax3 "Protein Pax3" species:101...   338  1.1e-30   1
UNIPROTKB|Q0IH87 - symbol:pax3-b "Paired box protein Pax-...   338  1.1e-30   1
UNIPROTKB|F1MLH9 - symbol:PAX8 "Uncharacterized protein" ...   288  1.2e-30   2
MGI|MGI:97491 - symbol:Pax7 "paired box gene 7" species:1...   338  1.5e-30   1
RGD|1564360 - symbol:Pax7 "paired box 7" species:10116 "R...   338  1.5e-30   1
UNIPROTKB|Q5R9M8 - symbol:PAX8 "Paired box protein Pax-8"...   290  1.7e-30   2
UNIPROTKB|E1BKL5 - symbol:PAX7 "Uncharacterized protein" ...   337  2.1e-30   1
UNIPROTKB|F1PNX6 - symbol:PAX7 "Uncharacterized protein" ...   337  2.1e-30   1
UNIPROTKB|E9PFV9 - symbol:PAX7 "Paired box protein Pax-7"...   337  2.1e-30   1
UNIPROTKB|O42349 - symbol:Pax-7 "PAX7 protein" species:90...   338  2.2e-30   1
UNIPROTKB|F1NYC8 - symbol:PAX7 "Uncharacterized protein" ...   336  2.6e-30   1
UNIPROTKB|P23759 - symbol:PAX7 "Paired box protein Pax-7"...   337  2.7e-30   1
ZFIN|ZDB-GENE-080917-54 - symbol:pax7b "paired box gene 7...   331  1.1e-29   1
ZFIN|ZDB-GENE-080917-53 - symbol:pax3b "paired box gene 3...   327  1.8e-29   1
UNIPROTKB|Q645N4 - symbol:pax3-a "Paired box protein Pax-...   327  2.0e-29   1
ZFIN|ZDB-GENE-980526-52 - symbol:pax3a "paired box gene 3...   324  7.1e-29   1
UNIPROTKB|F1MWQ4 - symbol:PAX5 "Uncharacterized protein" ...   306  2.8e-27   1
UNIPROTKB|E2RIS8 - symbol:PAX5 "Uncharacterized protein" ...   306  2.8e-27   1
UNIPROTKB|J9P1P0 - symbol:PAX5 "Uncharacterized protein" ...   306  2.8e-27   1
UNIPROTKB|C0KTF6 - symbol:PAX5 "Paired box protein Pax-5"...   306  2.8e-27   1
UNIPROTKB|C0KTG0 - symbol:PAX5 "B cell specific activator...   306  2.8e-27   1
UNIPROTKB|E7EQT0 - symbol:PAX5 "Paired box protein Pax-5"...   306  2.8e-27   1
UNIPROTKB|E7ERW5 - symbol:PAX5 "Paired box protein Pax-5"...   306  2.8e-27   1
UNIPROTKB|Q02548 - symbol:PAX5 "Paired box protein Pax-5"...   306  2.8e-27   1
UNIPROTKB|F1ST83 - symbol:PAX5 "Uncharacterized protein" ...   306  2.8e-27   1
MGI|MGI:97489 - symbol:Pax5 "paired box gene 5" species:1...   306  2.8e-27   1
UNIPROTKB|Q9YH95 - symbol:pax5 "Paired box protein Pax-5"...   301  9.4e-27   1
ZFIN|ZDB-GENE-001030-3 - symbol:pax8 "paired box gene 8" ...   301  9.4e-27   1
UNIPROTKB|F1SML3 - symbol:PAX4 "Uncharacterized protein" ...   225  1.2e-26   2
UNIPROTKB|I3LEF5 - symbol:PAX4 "Uncharacterized protein" ...   225  1.2e-26   2
UNIPROTKB|F1NEQ7 - symbol:PAX2 "Uncharacterized protein" ...   298  1.9e-26   1
UNIPROTKB|F1NWQ9 - symbol:PAX2 "Uncharacterized protein" ...   298  1.9e-26   1
UNIPROTKB|F1MNR2 - symbol:PAX2 "Uncharacterized protein" ...   298  1.9e-26   1
UNIPROTKB|F1PDS6 - symbol:PAX2 "Uncharacterized protein" ...   298  1.9e-26   1
UNIPROTKB|F1PJT0 - symbol:PAX2 "Uncharacterized protein" ...   298  1.9e-26   1
UNIPROTKB|G3V5U4 - symbol:PAX2 "Paired box protein Pax-2"...   298  1.9e-26   1
UNIPROTKB|Q02962 - symbol:PAX2 "Paired box protein Pax-2"...   298  1.9e-26   1
UNIPROTKB|Q5SZP1 - symbol:PAX2 "Paired box protein Pax-2"...   298  1.9e-26   1
UNIPROTKB|F1S8U8 - symbol:PAX2 "Uncharacterized protein" ...   298  1.9e-26   1
UNIPROTKB|D5GSQ9 - symbol:pax2 "Paired box 2" species:994...   298  1.9e-26   1
MGI|MGI:97486 - symbol:Pax2 "paired box gene 2" species:1...   298  1.9e-26   1
RGD|1305568 - symbol:Pax2 "paired box 2" species:10116 "R...   298  1.9e-26   1
UNIPROTKB|D4ACZ2 - symbol:Pax2 "Paired box gene 2 (Predic...   298  1.9e-26   1
UNIPROTKB|F1NWR1 - symbol:PAX2 "Uncharacterized protein" ...   298  2.9e-26   1
ZFIN|ZDB-GENE-001030-2 - symbol:pax5 "paired box gene 5" ...   292  8.4e-26   1
UNIPROTKB|F1MYE7 - symbol:PAX4 "Uncharacterized protein" ...   215  2.1e-25   2
UNIPROTKB|I3LUF8 - symbol:PAX8 "Uncharacterized protein" ...   288  2.2e-25   1
ZFIN|ZDB-GENE-070112-182 - symbol:pax1a "paired box 1a" s...   288  2.2e-25   1
UNIPROTKB|E2REB7 - symbol:PAX4 "Uncharacterized protein" ...   214  4.4e-25   2
UNIPROTKB|P47236 - symbol:PAX1 "Paired box protein Pax-1"...   285  4.6e-25   1
RGD|1588548 - symbol:Pax1 "paired box 1" species:10116 "R...   285  4.6e-25   1
ZFIN|ZDB-GENE-980526-399 - symbol:pax9 "paired box gene 9...   285  4.6e-25   1
ZFIN|ZDB-GENE-060503-372 - symbol:pax1b "paired box 1b" s...   284  5.9e-25   1
RGD|620433 - symbol:Pax4 "paired box 4" species:10116 "Ra...   213  6.8e-25   2
UNIPROTKB|O88436 - symbol:Pax4 "Paired box protein Pax-4"...   213  6.8e-25   2
MGI|MGI:97485 - symbol:Pax1 "paired box gene 1" species:1...   285  8.2e-25   1
MGI|MGI:97488 - symbol:Pax4 "paired box gene 4" species:1...   212  9.0e-25   2
UNIPROTKB|F1MH87 - symbol:PAX1 "Uncharacterized protein" ...   285  9.1e-25   1
UNIPROTKB|J3KPG0 - symbol:PAX4 "Paired box protein Pax-4"...   209  9.9e-25   2
UNIPROTKB|O43316 - symbol:PAX4 "Paired box protein Pax-4"...   209  1.0e-24   2
UNIPROTKB|F1SAU2 - symbol:PAX1 "Uncharacterized protein" ...   285  1.1e-24   1
UNIPROTKB|F1N8W6 - symbol:PAX9 "Paired box protein Pax-9"...   281  1.2e-24   1
UNIPROTKB|F1N8W7 - symbol:PAX9 "Paired box protein Pax-9"...   281  1.2e-24   1
UNIPROTKB|F1N8X4 - symbol:PAX9 "Paired box protein Pax-9"...   281  1.2e-24   1

WARNING:  Descriptions of 484 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0001147 [details] [associations]
            symbol:gsb-n "gooseberry-neuro" species:7227 "Drosophila
            melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0007367
            "segment polarity determination" evidence=IEP;NAS] [GO:0000977 "RNA
            polymerase II regulatory region sequence-specific DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005667
            "transcription factor complex" evidence=ISS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 EMBL:AE013599
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007367
            GO:GO:0000977 EMBL:AY071593 EMBL:M14941 EMBL:M14943 PIR:A26332
            PIR:B43698 RefSeq:NP_523862.1 UniGene:Dm.5850
            ProteinModelPortal:P09083 SMR:P09083 DIP:DIP-23099N IntAct:P09083
            MINT:MINT-1723154 STRING:P09083 EnsemblMetazoa:FBtr0072461
            GeneID:38004 KEGG:dme:Dmel_CG2692 CTD:38004 FlyBase:FBgn0001147
            eggNOG:NOG326044 GeneTree:ENSGT00680000099553 HOGENOM:HOG000004133
            InParanoid:P09083 KO:K09381 OMA:DMSSANS OrthoDB:EOG42BVRM
            PhylomeDB:P09083 GenomeRNAi:38004 NextBio:806501 Bgee:P09083
            GermOnline:CG2692 Uniprot:P09083
        Length = 449

 Score = 344 (126.2 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
 Identities = 65/88 (73%), Positives = 75/88 (85%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             MAA+GVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKP+V +P++E RI+E +
Sbjct:    48 MAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPKVTSPEIETRIDELR 107

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTES 88
             K NP+I SWE+R+KLIK    D   T S
Sbjct:   108 KENPSIFSWEIREKLIKEGFADPPSTSS 135

 Score = 222 (83.2 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
 Identities = 43/62 (69%), Positives = 50/62 (80%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             D SDTESEPGI LKRKQRRSRTTFT+ QLE LE++F R+ YPD+YTRE LA    +TE R
Sbjct:   166 DISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEAR 225

Query:   142 VQ 143
             +Q
Sbjct:   226 IQ 227


>ZFIN|ZDB-GENE-990415-201 [details] [associations]
            symbol:pax7a "paired box gene 7a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0048066 "developmental pigmentation"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389
            ZFIN:ZDB-GENE-990415-201 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048066 HSSP:P06601
            HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360 EMBL:AF014368
            EMBL:BC163502 EMBL:BC163523 EMBL:BX957335 IPI:IPI00510646
            RefSeq:NP_571400.1 UniGene:Dr.150230 UniGene:Dr.75807 SMR:O57418
            GeneID:30587 KEGG:dre:30587 CTD:30587 InParanoid:O57418
            NextBio:20806957 Uniprot:O57418
        Length = 507

 Score = 336 (123.3 bits), Expect = 6.1e-53, Sum P(2) = 6.1e-53
 Identities = 65/78 (83%), Positives = 70/78 (89%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR VATPDVEKRIEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEEY 121

Query:    60 KKTNPNITSWEVRDKLIK 77
             K+ NP + SWE+RDKL+K
Sbjct:   122 KRENPGMFSWEIRDKLLK 139

 Score = 233 (87.1 bits), Expect = 6.1e-53, Sum P(2) = 6.1e-53
 Identities = 47/68 (69%), Positives = 56/68 (82%)

Query:    77 KVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKF 135
             K +R D+ SD ESEP + LKRKQRRSRTTFT+ QLEELEK+F+R+HYPDIYTRE LA + 
Sbjct:   198 KGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 257

Query:   136 GMTETRVQ 143
              +TE RVQ
Sbjct:   258 KLTEARVQ 265


>FB|FBgn0003145 [details] [associations]
            symbol:prd "paired" species:7227 "Drosophila melanogaster"
            [GO:0000977 "RNA polymerase II regulatory region sequence-specific
            DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0007366 "periodic partitioning by pair rule gene"
            evidence=NAS;TAS] [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            EMBL:AE014134 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0007366
            GO:GO:0000977 eggNOG:NOG326044 GeneTree:ENSGT00680000099553
            KO:K09381 OrthoDB:EOG42BVRM EMBL:M14548 EMBL:AY059447 PIR:A26062
            RefSeq:NP_523556.1 RefSeq:NP_723721.1 UniGene:Dm.2598 PDB:1FJL
            PDB:1PDN PDBsum:1FJL PDBsum:1PDN ProteinModelPortal:P06601
            SMR:P06601 DIP:DIP-22888N MINT:MINT-345010 STRING:P06601
            PRIDE:P06601 EnsemblMetazoa:FBtr0080298 GeneID:34629
            KEGG:dme:Dmel_CG6716 UCSC:CG6716-RA CTD:5548 FlyBase:FBgn0003145
            InParanoid:P06601 OMA:TASYIMP PhylomeDB:P06601
            EvolutionaryTrace:P06601 GenomeRNAi:34629 NextBio:789399
            Bgee:P06601 GermOnline:CG6716 Uniprot:P06601
        Length = 613

 Score = 350 (128.3 bits), Expect = 8.0e-53, Sum P(2) = 8.0e-53
 Identities = 66/92 (71%), Positives = 77/92 (83%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             MAA G+RPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR+ATP++E RIEEYK
Sbjct:    55 MAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYK 114

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI 92
             +++P + SWE+R+KLI+    D S   S   I
Sbjct:   115 RSSPGMFSWEIREKLIREGVCDRSTAPSVSAI 146

 Score = 226 (84.6 bits), Expect = 8.0e-53, Sum P(2) = 8.0e-53
 Identities = 48/86 (55%), Positives = 60/86 (69%)

Query:    77 KVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFG 136
             K S  D SD ESEPGI LKRKQRR RTTF+++QL+ELE++F+R+ YPDIYTRE LA +  
Sbjct:   192 KPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTN 251

Query:   137 MTETRVQQFVLGTAGFLLSCLPSVSG 162
             +TE R+Q +       L     SVSG
Sbjct:   252 LTEARIQVWFSNRRARLRKQHTSVSG 277


>UNIPROTKB|Q28DP6 [details] [associations]
            symbol:pax3 "Paired box protein Pax-3" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0008543 "fibroblast growth factor receptor signaling pathway"
            evidence=ISS] [GO:0014029 "neural crest formation" evidence=ISS]
            [GO:0014034 "neural crest cell fate commitment" evidence=ISS]
            [GO:0016055 "Wnt receptor signaling pathway" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0048785 "hatching gland development"
            evidence=ISS] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            GO:GO:0008543 GO:GO:0045893 GO:GO:0007399 GO:GO:0016055
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0014034
            eggNOG:NOG326044 KO:K09381 HOVERGEN:HBG009115 GO:GO:0048785
            InterPro:IPR022106 Pfam:PF12360 CTD:5077 HOGENOM:HOG000230939
            EMBL:CR855399 RefSeq:NP_001006776.2 UniGene:Str.44149 STRING:Q28DP6
            GeneID:448464 KEGG:xtr:448464 Xenbase:XB-GENE-482740 Bgee:Q28DP6
            Uniprot:Q28DP6
        Length = 461

 Score = 272 (100.8 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
 Identities = 58/88 (65%), Positives = 68/88 (77%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ V TP+VEK+IEE+
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPEVEKKIEEF 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTE 87
             K+ NP ++S   R    K  + D+ D E
Sbjct:   122 KRDNP-VSSIS-RILRSKFGKGDEEDIE 147

 Score = 221 (82.9 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             + SD +SEP + LKRKQRRSRTTFT+ QLEELE++F+R+HYPDIYTRE LA +  +TE R
Sbjct:   180 EGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEAR 239

Query:   142 VQ 143
             VQ
Sbjct:   240 VQ 241


>UNIPROTKB|F1NUP3 [details] [associations]
            symbol:F1NUP3 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007507 "heart
            development" evidence=IEA] [GO:0007517 "muscle organ development"
            evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048066 "developmental pigmentation"
            evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
            [GO:0060594 "mammary gland specification" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
            EMBL:AADN02024154 EMBL:AADN02024155 EMBL:AADN02024156
            EMBL:AADN02024157 EMBL:AADN02024158 IPI:IPI00591508
            Ensembl:ENSGALT00000040854 ArrayExpress:F1NUP3 Uniprot:F1NUP3
        Length = 491

 Score = 234 (87.4 bits), Expect = 4.5e-39, Sum P(2) = 4.5e-39
 Identities = 47/89 (52%), Positives = 60/89 (67%)

Query:    55 RIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELE 114
             +  +  K NP    W  + K       + SD +SEP + LKRKQRRSRTTFT+ QLEELE
Sbjct:   185 KTRQSSKRNPQ--GWSSKTKASAAQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELE 242

Query:   115 KSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   243 RAFERTHYPDIYTREELAQRAKLTEARVQ 271

 Score = 213 (80.0 bits), Expect = 4.5e-39, Sum P(2) = 4.5e-39
 Identities = 42/53 (79%), Positives = 44/53 (83%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVE 53
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+    D E
Sbjct:    66 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKKMKMDTE 118


>UNIPROTKB|F1NF66 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 EMBL:AADN02040161 EMBL:AC140946
            IPI:IPI00589493 Ensembl:ENSGALT00000019805 ArrayExpress:F1NF66
            Uniprot:F1NF66
        Length = 422

 Score = 261 (96.9 bits), Expect = 4.3e-38, Sum P(2) = 4.3e-38
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    32 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 91

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:    92 RECPSIFAWEIRDRLL 107

 Score = 169 (64.5 bits), Expect = 4.3e-38, Sum P(2) = 4.3e-38
 Identities = 32/62 (51%), Positives = 46/62 (74%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R
Sbjct:   195 EDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEAR 253

Query:   142 VQ 143
             +Q
Sbjct:   254 IQ 255


>ZFIN|ZDB-GENE-001031-1 [details] [associations]
            symbol:pax6b "paired box gene 6b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0002088 "lens development in camera-type eye"
            evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA;IDA] [GO:0002089 "lens morphogenesis in camera-type
            eye" evidence=IMP] [GO:0003310 "pancreatic A cell differentiation"
            evidence=IMP] [GO:0003309 "type B pancreatic cell differentiation"
            evidence=IMP] [GO:0003311 "pancreatic D cell differentiation"
            evidence=IMP] [GO:0090104 "pancreatic epsilon cell differentiation"
            evidence=IMP] [GO:0001071 "nucleic acid binding transcription
            factor activity" evidence=IDA] [GO:2001141 "regulation of RNA
            biosynthetic process" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 ZFIN:ZDB-GENE-001031-1 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030902
            GO:GO:0002089 GO:GO:0001071 HSSP:P26367 EMBL:BX000453 GO:GO:0003310
            GO:GO:0003309 GeneTree:ENSGT00680000099553 HOVERGEN:HBG009115
            HOGENOM:HOG000230939 KO:K08031 GO:GO:0003311 GO:GO:0090104
            EMBL:AF061252 IPI:IPI00630807 RefSeq:NP_571716.1 UniGene:Dr.132861
            SMR:Q9YHZ8 STRING:Q9YHZ8 Ensembl:ENSDART00000145946 GeneID:60639
            KEGG:dre:60639 CTD:60639 InParanoid:Q9YHZ8 OMA:SISHRNE
            NextBio:20892425 Uniprot:Q9YHZ8
        Length = 437

 Score = 259 (96.2 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    51 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYK 110

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:   111 RECPSIFAWEIRDRLL 126

 Score = 169 (64.5 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
 Identities = 32/62 (51%), Positives = 46/62 (74%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R
Sbjct:   214 EDSD-ETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEAR 272

Query:   142 VQ 143
             +Q
Sbjct:   273 IQ 274


>UNIPROTKB|F1NXF7 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 EMBL:AADN02040161 EMBL:AC140946
            IPI:IPI00572110 Ensembl:ENSGALT00000040112 ArrayExpress:F1NXF7
            Uniprot:F1NXF7
        Length = 186

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 79/144 (54%), Positives = 104/144 (72%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    28 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 87

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGIV-LKRKQRRSRTTFTSAQLEELEKSFQR 119
             +  P+I +WE+RD+L+      + +  S   I  LKRK +R+RT+FT  Q+E LEK F+R
Sbjct:    88 RECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRLKRKLQRNRTSFTQEQIEALEKEFER 147

Query:   120 SHYPDIYTREALANKFGMTETRVQ 143
             +HYPD++ RE LA K  + E R+Q
Sbjct:   148 THYPDVFARERLAAKIDLPEARIQ 171


>UNIPROTKB|E1C2N6 [details] [associations]
            symbol:E1C2N6 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
            OMA:VHQSTLP EMBL:AADN02024154 EMBL:AADN02024155 EMBL:AADN02024156
            EMBL:AADN02024157 EMBL:AADN02024158 IPI:IPI00819860
            Ensembl:ENSGALT00000008428 ArrayExpress:E1C2N6 Uniprot:E1C2N6
        Length = 484

 Score = 221 (82.9 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             + SD +SEP + LKRKQRRSRTTFT+ QLEELE++F+R+HYPDIYTRE LA +  +TE R
Sbjct:   203 EGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEAR 262

Query:   142 VQ 143
             VQ
Sbjct:   263 VQ 264

 Score = 208 (78.3 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
 Identities = 40/46 (86%), Positives = 42/46 (91%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR 46
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPK 107


>WB|WBGene00006870 [details] [associations]
            symbol:vab-3 species:6239 "Caenorhabditis elegans"
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0040039 "inductive cell migration" evidence=IMP] [GO:0009952
            "anterior/posterior pattern specification" evidence=IMP]
            [GO:0045138 "tail tip morphogenesis" evidence=IMP] [GO:0045165
            "cell fate commitment" evidence=IMP] [GO:0030155 "regulation of
            cell adhesion" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0030155
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040039 GO:GO:0045138
            GO:GO:0045165 HSSP:P26367 GeneTree:ENSGT00680000099553 EMBL:Z49937
            EMBL:U31537 PIR:T20900 RefSeq:NP_001024570.1 UniGene:Cel.8982
            SMR:G5EDS1 IntAct:G5EDS1 EnsemblMetazoa:F14F3.1a GeneID:181251
            KEGG:cel:CELE_F14F3.1 CTD:181251 WormBase:F14F3.1a OMA:MSDAGHT
            NextBio:913106 Uniprot:G5EDS1
        Length = 455

 Score = 258 (95.9 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G RPC ISR L+VS+GCVSKIL RY E+G+IRP  IGGSKPRVAT DV ++IE+YK
Sbjct:    33 LAHKGCRPCDISRLLQVSNGCVSKILCRYYESGTIRPRAIGGSKPRVATSDVVEKIEDYK 92

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RDKL+
Sbjct:    93 RDQPSIFAWEIRDKLL 108

 Score = 159 (61.0 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
 Identities = 28/50 (56%), Positives = 38/50 (76%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R+Q
Sbjct:   213 LKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQ 262


>UNIPROTKB|G5EDS1 [details] [associations]
            symbol:vab-3 "Protein VAB-3, isoform a" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            GO:GO:0005737 GO:GO:0030155 GO:GO:0009952 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040039
            GO:GO:0045138 GO:GO:0045165 HSSP:P26367
            GeneTree:ENSGT00680000099553 EMBL:Z49937 EMBL:U31537 PIR:T20900
            RefSeq:NP_001024570.1 UniGene:Cel.8982 SMR:G5EDS1 IntAct:G5EDS1
            EnsemblMetazoa:F14F3.1a GeneID:181251 KEGG:cel:CELE_F14F3.1
            CTD:181251 WormBase:F14F3.1a OMA:MSDAGHT NextBio:913106
            Uniprot:G5EDS1
        Length = 455

 Score = 258 (95.9 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G RPC ISR L+VS+GCVSKIL RY E+G+IRP  IGGSKPRVAT DV ++IE+YK
Sbjct:    33 LAHKGCRPCDISRLLQVSNGCVSKILCRYYESGTIRPRAIGGSKPRVATSDVVEKIEDYK 92

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RDKL+
Sbjct:    93 RDQPSIFAWEIRDKLL 108

 Score = 159 (61.0 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
 Identities = 28/50 (56%), Positives = 38/50 (76%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R+Q
Sbjct:   213 LKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQ 262


>FB|FBgn0019650 [details] [associations]
            symbol:toy "twin of eyeless" species:7227 "Drosophila
            melanogaster" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
            evidence=IEA;NAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0035214 "eye-antennal disc
            development" evidence=IMP] [GO:0048749 "compound eye development"
            evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0016319 "mushroom
            body development" evidence=IMP] [GO:0048854 "brain morphogenesis"
            evidence=IMP] [GO:0010628 "positive regulation of gene expression"
            evidence=IMP] [GO:0008056 "ocellus development" evidence=IGI;IMP]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0016319
            EMBL:AE014135 GO:GO:0048749 GO:GO:0048854 HSSP:P26367
            GeneTree:ENSGT00680000099553 GO:GO:0008056 FlyBase:FBgn0019650
            ChiTaRS:toy EMBL:AY051487 RefSeq:NP_524638.3 UniGene:Dm.1885
            SMR:Q9V490 IntAct:Q9V490 MINT:MINT-774624 STRING:Q9V490
            EnsemblMetazoa:FBtr0089185 GeneID:43833 KEGG:dme:Dmel_CG11186
            UCSC:CG11186-RA CTD:43833 InParanoid:Q9V490 OMA:YMFHDPL
            GenomeRNAi:43833 NextBio:836147 Uniprot:Q9V490
        Length = 543

 Score = 250 (93.1 bits), Expect = 5.5e-36, Sum P(2) = 5.5e-36
 Identities = 52/97 (53%), Positives = 70/97 (72%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSI+P  IGGSKPRVAT  V ++I +YK
Sbjct:    57 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYK 116

Query:    61 KTNPNITSWEVRDKLI--KVSRLDDSDTESEPGIVLK 95
             +  P+I +WE+RD+L+  +V   D+  + S    VL+
Sbjct:   117 RECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLR 153

 Score = 169 (64.5 bits), Expect = 5.5e-36, Sum P(2) = 5.5e-36
 Identities = 29/59 (49%), Positives = 46/59 (77%)

Query:    85 DTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             D +S+  + LKRK +R+RT+F++ Q++ LEK F+R+HYPD++ RE LA+K G+ E R+Q
Sbjct:   252 DEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 310


>UNIPROTKB|F1NYH7 [details] [associations]
            symbol:F1NYH7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 EMBL:AADN02024154 EMBL:AADN02024155
            EMBL:AADN02024156 EMBL:AADN02024157 EMBL:AADN02024158
            IPI:IPI00587855 Ensembl:ENSGALT00000006292 ArrayExpress:F1NYH7
            Uniprot:F1NYH7
        Length = 188

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 84/148 (56%), Positives = 102/148 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+      E R+  + 
Sbjct:    29 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQECTPAELRLAHWG 88

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEP----G-IVLKRKQRRSRTTFTSAQLEELEK 115
             +   +++S   +D+             S P    G + LKRKQRRSRTTFT+ QLEELE+
Sbjct:    89 R---DVSSCLAQDQRYSAREPGLCAALSVPRWASGHLPLKRKQRRSRTTFTAEQLEELER 145

Query:   116 SFQRSHYPDIYTREALANKFGMTETRVQ 143
             +F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   146 AFERTHYPDIYTREELAQRAKLTEARVQ 173


>UNIPROTKB|F1NKU4 [details] [associations]
            symbol:PAX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0051573
            "negative regulation of histone H3-K9 methylation" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0051573 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 OMA:IXIQESP EMBL:AADN02071616
            EMBL:AADN02071617 EMBL:AADN02071618 EMBL:AADN02071619
            EMBL:AADN02071620 EMBL:AADN02071621 EMBL:AADN02071622
            EMBL:AADN02071623 EMBL:AADN02071624 EMBL:AADN02071625
            EMBL:AADN02071626 EMBL:AADN02071627 EMBL:AADN02071628
            EMBL:AADN02071629 IPI:IPI00574388 Ensembl:ENSGALT00000026510
            Uniprot:F1NKU4
        Length = 393

 Score = 306 (112.8 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128

 Score = 87 (35.7 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 20/40 (50%), Positives = 24/40 (60%)

Query:    88 SEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYT 127
             S PG    RKQ R    FT  QLE L++ F+R HY DI+T
Sbjct:   213 SLPGRDFLRKQMRG-DLFTQQQLEVLDRVFERQHYSDIFT 251


>UNIPROTKB|F1NKV2 [details] [associations]
            symbol:PAX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 EMBL:AADN02071616 EMBL:AADN02071617
            EMBL:AADN02071618 EMBL:AADN02071619 EMBL:AADN02071620
            EMBL:AADN02071621 EMBL:AADN02071622 EMBL:AADN02071623
            EMBL:AADN02071624 EMBL:AADN02071625 EMBL:AADN02071626
            EMBL:AADN02071627 EMBL:AADN02071628 EMBL:AADN02071629
            IPI:IPI00591695 Ensembl:ENSGALT00000026508 Uniprot:F1NKV2
        Length = 374

 Score = 306 (112.8 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    29 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 88

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:    89 RQNPTMFAWEIRDRLL-AERVCDNDT 113

 Score = 87 (35.7 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 20/40 (50%), Positives = 24/40 (60%)

Query:    88 SEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYT 127
             S PG    RKQ R    FT  QLE L++ F+R HY DI+T
Sbjct:   198 SLPGRDFLRKQMRG-DLFTQQQLEVLDRVFERQHYSDIFT 236


>UNIPROTKB|C0KTF7 [details] [associations]
            symbol:PAX5 "Paired box protein Pax-5" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 HOGENOM:HOG000230938
            InterPro:IPR022130 Pfam:PF12403 EMBL:AL161781 EMBL:AL450267
            UniGene:Hs.654464 HGNC:HGNC:8619 ChiTaRS:PAX5 EMBL:FJ626422
            IPI:IPI00929705 SMR:C0KTF7 STRING:C0KTF7 Ensembl:ENST00000414447
            UCSC:uc011lpz.1 Uniprot:C0KTF7
        Length = 348

 Score = 306 (112.8 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128

 Score = 87 (35.7 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 20/40 (50%), Positives = 24/40 (60%)

Query:    88 SEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYT 127
             S PG    RKQ R    FT  QLE L++ F+R HY DI+T
Sbjct:   170 SLPGRDFLRKQMRG-DLFTQQQLEVLDRVFERQHYSDIFT 208


>UNIPROTKB|C0KTF8 [details] [associations]
            symbol:PAX5 "B cell specific activator protein variant A
            delta 5/9" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0007275
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            HOGENOM:HOG000230938 InterPro:IPR022130 Pfam:PF12403 EMBL:AL161781
            EMBL:AL450267 UniGene:Hs.654464 HGNC:HGNC:8619 ChiTaRS:PAX5
            EMBL:FJ626423 IPI:IPI00929668 SMR:C0KTF8 STRING:C0KTF8
            Ensembl:ENST00000520281 UCSC:uc011lqc.1 Uniprot:C0KTF8
        Length = 319

 Score = 306 (112.8 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128

 Score = 87 (35.7 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 20/40 (50%), Positives = 24/40 (60%)

Query:    88 SEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYT 127
             S PG    RKQ R    FT  QLE L++ F+R HY DI+T
Sbjct:   170 SLPGRDFLRKQMRG-DLFTQQQLEVLDRVFERQHYSDIFT 208


>UNIPROTKB|F1NXF3 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
            gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
            "RNA polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
            polymerase II transcription factor activity" evidence=IEA]
            [GO:0001568 "blood vessel development" evidence=IEA] [GO:0001709
            "cell fate determination" evidence=IEA] [GO:0001764 "neuron
            migration" evidence=IEA] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
            development in camera-type eye" evidence=IEA] [GO:0003322
            "pancreatic A cell development" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007224 "smoothened signaling
            pathway" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
            [GO:0007435 "salivary gland morphogenesis" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0009611 "response to wounding" evidence=IEA] [GO:0009950
            "dorsal/ventral axis specification" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
            cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
            regionalization" evidence=IEA] [GO:0021797 "forebrain
            anterior/posterior pattern specification" evidence=IEA] [GO:0021798
            "forebrain dorsal/ventral pattern formation" evidence=IEA]
            [GO:0021902 "commitment of neuronal cell to specific neuron type in
            forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
            formation" evidence=IEA] [GO:0021912 "regulation of transcription
            from RNA polymerase II promoter involved in spinal cord motor
            neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
            transcription from RNA polymerase II promoter involved in ventral
            spinal cord interneuron specification" evidence=IEA] [GO:0021918
            "regulation of transcription from RNA polymerase II promoter
            involved in somatic motor neuron fate commitment" evidence=IEA]
            [GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0030334 "regulation of cell migration"
            evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
            differentiation" evidence=IEA] [GO:0031625 "ubiquitin protein
            ligase binding" evidence=IEA] [GO:0032808 "lacrimal gland
            development" evidence=IEA] [GO:0033365 "protein localization to
            organelle" evidence=IEA] [GO:0035035 "histone acetyltransferase
            binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
            development" evidence=IEA] [GO:0042593 "glucose homeostasis"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048505 "regulation of timing of cell differentiation"
            evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
            evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
            [GO:0050680 "negative regulation of epithelial cell proliferation"
            evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
            [GO:0061303 "cornea development in camera-type eye" evidence=IEA]
            [GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0070412 "R-SMAD
            binding" evidence=IEA] [GO:0071837 "HMG box domain binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
            GO:GO:0009611 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
            GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0050680
            GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
            GO:GO:0023019 GO:GO:0048505 GeneTree:ENSGT00680000099553
            OMA:NGQTGTW EMBL:AADN02040161 EMBL:AC140946 IPI:IPI00819256
            Ensembl:ENSGALT00000040120 ArrayExpress:F1NXF3 Uniprot:F1NXF3
        Length = 436

 Score = 226 (84.6 bits), Expect = 7.2e-34, Sum P(2) = 7.2e-34
 Identities = 49/90 (54%), Positives = 62/90 (68%)

Query:     1 MAAAGVRPCVISRQLR--------------VSHGCVSKILNRYQETGSIRPGVIGGSKPR 46
             +A +G RPC ISR L+              VS+GCVSKIL RY ETGSIRP  IGGSKPR
Sbjct:    32 LAHSGARPCDISRILQTHADAKVQVLDNQNVSNGCVSKILGRYYETGSIRPRAIGGSKPR 91

Query:    47 VATPDVEKRIEEYKKTNPNITSWEVRDKLI 76
             VATP+V  +I +YK+  P+I +WE+RD+L+
Sbjct:    92 VATPEVVSKIAQYKRECPSIFAWEIRDRLL 121

 Score = 169 (64.5 bits), Expect = 7.2e-34, Sum P(2) = 7.2e-34
 Identities = 32/62 (51%), Positives = 46/62 (74%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R
Sbjct:   209 EDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEAR 267

Query:   142 VQ 143
             +Q
Sbjct:   268 IQ 269


>UNIPROTKB|G3V5S4 [details] [associations]
            symbol:PAX2 "Paired box protein Pax-2" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 EMBL:AL138762 EMBL:AL589862
            HGNC:HGNC:8616 ProteinModelPortal:G3V5S4 SMR:G3V5S4
            Ensembl:ENST00000554172 ArrayExpress:G3V5S4 Bgee:G3V5S4
            Uniprot:G3V5S4
        Length = 303

 Score = 298 (110.0 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    48 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 107

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   108 RQNPTMFAWEIRDRLL-AEGICDNDT 132

 Score = 84 (34.6 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query:    87 ESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIY 126
             +S+ G+   RK  R+  TFT  QLE L++ F+R  YPD++
Sbjct:   212 DSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYPDVF 250


>ZFIN|ZDB-GENE-990415-200 [details] [associations]
            symbol:pax6a "paired box gene 6a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IMP] [GO:0030902 "hindbrain development"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA;IDA] [GO:0030900 "forebrain development" evidence=IGI]
            [GO:0001071 "nucleic acid binding transcription factor activity"
            evidence=IDA] [GO:2001141 "regulation of RNA biosynthetic process"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-990415-200 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0030900 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030902 GO:GO:0001071
            GeneTree:ENSGT00680000099553 EMBL:AL929172 EMBL:BX004784
            EMBL:CU927933 IPI:IPI00992852 Ensembl:ENSDART00000129319
            ArrayExpress:F1QLC9 Bgee:F1QLC9 Uniprot:F1QLC9
        Length = 461

 Score = 224 (83.9 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
 Identities = 49/90 (54%), Positives = 62/90 (68%)

Query:     1 MAAAGVRPCVISRQLR--------------VSHGCVSKILNRYQETGSIRPGVIGGSKPR 46
             +A +G RPC ISR L+              VS+GCVSKIL RY ETGSIRP  IGGSKPR
Sbjct:    61 LAHSGARPCDISRILQTHADAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPR 120

Query:    47 VATPDVEKRIEEYKKTNPNITSWEVRDKLI 76
             VATP+V  +I +YK+  P+I +WE+RD+L+
Sbjct:   121 VATPEVVGKIAQYKRECPSIFAWEIRDRLL 150

 Score = 169 (64.5 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
 Identities = 32/62 (51%), Positives = 46/62 (74%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R
Sbjct:   238 EDSD-ETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEAR 296

Query:   142 VQ 143
             +Q
Sbjct:   297 IQ 298


>ZFIN|ZDB-GENE-990415-8 [details] [associations]
            symbol:pax2a "paired box gene 2a" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0009880 "embryonic pattern specification" evidence=IMP]
            [GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
            [GO:0001822 "kidney development" evidence=IMP] [GO:0048793
            "pronephros development" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0021549 "cerebellum development" evidence=IMP]
            [GO:0030917 "midbrain-hindbrain boundary development" evidence=IMP]
            [GO:0030901 "midbrain development" evidence=IGI;IMP] [GO:0030902
            "hindbrain development" evidence=IMP] [GO:0007422 "peripheral
            nervous system development" evidence=IGI;IMP] [GO:0030878 "thyroid
            gland development" evidence=IMP] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IGI;IMP] [GO:0001708 "cell fate
            specification" evidence=IGI;IMP] [GO:0048596 "embryonic camera-type
            eye morphogenesis" evidence=IGI] [GO:0072114 "pronephros
            morphogenesis" evidence=IMP] [GO:0035775 "pronephric glomerulus
            morphogenesis" evidence=IMP] [GO:0021588 "cerebellum formation"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0043049
            "otic placode formation" evidence=IGI;IMP] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 ZFIN:ZDB-GENE-990415-8 GO:GO:0005634
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            eggNOG:NOG326044 HOVERGEN:HBG009115 EMBL:X63961 EMBL:AF067530
            EMBL:AF067531 EMBL:AF067532 EMBL:AF067533 EMBL:AF067534
            EMBL:AF067535 EMBL:AF067536 EMBL:AF067537 EMBL:AF067538
            EMBL:AF067539 EMBL:AF067540 EMBL:AF067541 EMBL:BC066690
            IPI:IPI00483022 IPI:IPI00491072 IPI:IPI00494276 IPI:IPI00496561
            IPI:IPI00498555 IPI:IPI00504315 IPI:IPI00505213 IPI:IPI00509133
            IPI:IPI00509801 IPI:IPI00832225 IPI:IPI00923245 IPI:IPI00972778
            PIR:S23341 RefSeq:NP_571259.1 UniGene:Dr.75076
            ProteinModelPortal:Q90268 SMR:Q90268 STRING:Q90268
            Ensembl:ENSDART00000076998 Ensembl:ENSDART00000134424 GeneID:30425
            KEGG:dre:30425 CTD:30425 GeneTree:ENSGT00680000099910
            InParanoid:Q90268 KO:K15608 NextBio:20806828 ArrayExpress:Q90268
            Bgee:Q90268 InterPro:IPR022130 Pfam:PF12403 Uniprot:Q90268
        Length = 410

 Score = 299 (110.3 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
 Identities = 57/86 (66%), Positives = 70/86 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    47 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 106

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   107 RQNPTMFAWEIRDRLL-AEGVCDNDT 131

 Score = 76 (31.8 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query:    85 DTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIY-TREAL----ANKFGM 137
             +++S+  +   RK  R+   FT  QLE L++ F+R  YPD++ T E +    AN++ +
Sbjct:   232 NSDSQGSVESLRKHLRA-DAFTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSL 288


>UNIPROTKB|Q9PUK5 [details] [associations]
            symbol:pax8 "Paired box protein Pax-8" species:8355
            "Xenopus laevis" [GO:0001655 "urogenital system development"
            evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0035565
            "regulation of pronephros size" evidence=IGI] [GO:0039003
            "pronephric field specification" evidence=IGI] [GO:0039020
            "pronephric nephron tubule development" evidence=IGI] [GO:0042981
            "regulation of apoptotic process" evidence=ISS] [GO:0044212
            "transcription regulatory region DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0048793 "pronephros development" evidence=ISS]
            [GO:0071300 "cellular response to retinoic acid" evidence=IEP]
            [GO:1900212 "negative regulation of mesenchymal cell apoptotic
            process involved in metanephros development" evidence=ISS]
            [GO:1900218 "negative regulation of apoptotic process involved in
            metanephric nephron tubule development" evidence=ISS] [GO:2000611
            "positive regulation of thyroid hormone generation" evidence=ISS]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0045893
            GO:GO:0005654 GO:GO:0071300 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0007367
            GO:GO:2000611 GO:GO:0039020 GO:GO:0035565 GO:GO:0039003
            HOVERGEN:HBG009115 InterPro:IPR022130 Pfam:PF12403 HSSP:Q02548
            GO:GO:1900218 CTD:7849 KO:K09293 EMBL:AF179301 EMBL:AJ010504
            RefSeq:NP_001081941.1 UniGene:Xl.2754 ProteinModelPortal:Q9PUK5
            SMR:Q9PUK5 GeneID:398132 KEGG:xla:398132 Xenbase:XB-GENE-865008
            GO:GO:1900212 Uniprot:Q9PUK5
        Length = 465

 Score = 298 (110.0 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
 Identities = 57/86 (66%), Positives = 70/86 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSIRPGVIGGSKP+VATP V ++I +YK
Sbjct:    54 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYK 113

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   114 RQNPTMFAWEIRDRLL-TDGVCDNDT 138

 Score = 76 (31.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
 Identities = 20/55 (36%), Positives = 30/55 (54%)

Query:    80 RLDDSDTES-------EPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYT 127
             +LDDSD ES       +  + + RKQ R+   +    L+ LE  FQR H+P+ Y+
Sbjct:   213 KLDDSDQESCRLSIDSQGSVGISRKQLRTEA-YGHHPLDALECHFQRQHFPESYS 266


>UNIPROTKB|A0JMA6 [details] [associations]
            symbol:pax8 "Paired box protein Pax-8" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001655 "urogenital system
            development" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
            [GO:0039003 "pronephric field specification" evidence=ISS]
            [GO:0039020 "pronephric nephron tubule development" evidence=ISS]
            [GO:0042981 "regulation of apoptotic process" evidence=ISS]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0048793 "pronephros development"
            evidence=ISS] [GO:1900212 "negative regulation of mesenchymal cell
            apoptotic process involved in metanephros development"
            evidence=ISS] [GO:1900218 "negative regulation of apoptotic process
            involved in metanephric nephron tubule development" evidence=ISS]
            [GO:2000611 "positive regulation of thyroid hormone generation"
            evidence=ISS] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            GO:GO:0045893 GO:GO:0005654 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0044212
            GO:GO:0007367 GO:GO:0043049 GO:GO:2000611 eggNOG:NOG326044
            GO:GO:0039020 GO:GO:0039003 HOVERGEN:HBG009115 HOGENOM:HOG000230938
            InterPro:IPR022130 Pfam:PF12403 GO:GO:1900218 CTD:7849 KO:K09293
            GO:GO:1900212 EMBL:BC125805 RefSeq:NP_001072769.2 UniGene:Str.51436
            ProteinModelPortal:A0JMA6 SMR:A0JMA6 STRING:A0JMA6 GeneID:780226
            KEGG:xtr:780226 Xenbase:XB-GENE-483693 Bgee:A0JMA6 Uniprot:A0JMA6
        Length = 458

 Score = 298 (110.0 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
 Identities = 57/86 (66%), Positives = 70/86 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSIRPGVIGGSKP+VATP V ++I +YK
Sbjct:    46 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYK 105

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   106 RQNPTMFAWEIRDRLL-AEGVCDNDT 130

 Score = 74 (31.1 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
 Identities = 20/55 (36%), Positives = 30/55 (54%)

Query:    80 RLDDSDTES-------EPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYT 127
             +LDDSD ES       +  + + RKQ R+   +    L+ LE  FQR H+P+ Y+
Sbjct:   205 KLDDSDQESCRLSIDSQGSMGISRKQLRTEA-YGHHPLDALECHFQRQHFPESYS 258


>MGI|MGI:97492 [details] [associations]
            symbol:Pax8 "paired box gene 8" species:10090 "Mus musculus"
            [GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
            binding" evidence=ISO] [GO:0001077 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in positive regulation of transcription"
            evidence=ISO] [GO:0001655 "urogenital system development"
            evidence=IGI] [GO:0001656 "metanephros development" evidence=IGI]
            [GO:0001823 "mesonephros development" evidence=IMP] [GO:0003677
            "DNA binding" evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISO;TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
            [GO:0005667 "transcription factor complex" evidence=TAS]
            [GO:0006351 "transcription, DNA-dependent" evidence=ISO;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO;TAS] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0009887 "organ morphogenesis"
            evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
            [GO:0030878 "thyroid gland development" evidence=ISO;IGI;IMP]
            [GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0042981
            "regulation of apoptotic process" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO] [GO:0044212
            "transcription regulatory region DNA binding" evidence=ISO;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;IGI;IDA;IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0048793 "pronephros development" evidence=IMP] [GO:0071371
            "cellular response to gonadotropin stimulus" evidence=ISO]
            [GO:0072108 "positive regulation of mesenchymal to epithelial
            transition involved in metanephros morphogenesis" evidence=IMP]
            [GO:0072221 "metanephric distal convoluted tubule development"
            evidence=IMP] [GO:0072289 "metanephric nephron tubule formation"
            evidence=IMP] [GO:0072305 "negative regulation of mesenchymal cell
            apoptotic process involved in metanephric nephron morphogenesis"
            evidence=IMP] [GO:0072307 "regulation of metanephric nephron tubule
            epithelial cell differentiation" evidence=IMP] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=IMP] [GO:1900212 "negative regulation of
            mesenchymal cell apoptotic process involved in metanephros
            development" evidence=IMP] [GO:1900215 "negative regulation of
            apoptotic process involved in metanephric collecting duct
            development" evidence=IMP] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=IMP] [GO:2000594 "positive regulation of
            metanephric DCT cell differentiation" evidence=IMP] [GO:2000611
            "positive regulation of thyroid hormone generation"
            evidence=ISO;IMP] [GO:2000612 "regulation of thyroid-stimulating
            hormone secretion" evidence=ISO] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 MGI:MGI:97492 GO:GO:0030154
            GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0042472 EMBL:CH466542 GO:GO:0090190 GO:GO:0071599
            GO:GO:0001658 GO:GO:0000979 GO:GO:0003337 GO:GO:0072221
            GO:GO:0071371 GO:GO:0030878 GO:GO:2000611 GO:GO:0072108
            eggNOG:NOG326044 GO:GO:0072050 GO:GO:0072278 GO:GO:0072284
            GO:GO:0039003 GO:GO:0072307 HOVERGEN:HBG009115 HOGENOM:HOG000230938
            GeneTree:ENSGT00680000099910 InterPro:IPR022130 Pfam:PF12403
            GO:GO:0072289 GO:GO:1900215 GO:GO:1900218 GO:GO:0072305
            GO:GO:2000594 CTD:7849 KO:K09293 OMA:EQGLYPL GO:GO:2000612
            GO:GO:0072164 EMBL:X57487 EMBL:X99592 EMBL:X99593 EMBL:X99594
            EMBL:X99595 EMBL:X99596 EMBL:X99597 EMBL:X99598 EMBL:AL732528
            EMBL:BC020526 IPI:IPI00309457 PIR:A56925 RefSeq:NP_035170.1
            UniGene:Mm.2533 ProteinModelPortal:Q00288 SMR:Q00288 IntAct:Q00288
            STRING:Q00288 PhosphoSite:Q00288 PRIDE:Q00288
            Ensembl:ENSMUST00000028355 GeneID:18510 KEGG:mmu:18510
            InParanoid:Q6GU20 OrthoDB:EOG42NJ0G NextBio:294244 Bgee:Q00288
            CleanEx:MM_PAX8 Genevestigator:Q00288 GermOnline:ENSMUSG00000026976
            Uniprot:Q00288
        Length = 457

 Score = 298 (110.0 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
 Identities = 57/86 (66%), Positives = 70/86 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSIRPGVIGGSKP+VATP V ++I +YK
Sbjct:    37 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYK 96

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:    97 RQNPTMFAWEIRDRLL-AEGVCDNDT 121

 Score = 72 (30.4 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
 Identities = 19/53 (35%), Positives = 28/53 (52%)

Query:    80 RLDDSDTES-----EPGIVLKRKQRRSRT-TFTSAQLEELEKSFQRSHYPDIY 126
             ++DDSD +S     +        ++  RT TF+   LE LE  F+R HYP+ Y
Sbjct:   198 KMDDSDQDSCRLSIDSQSSSSGPRKHLRTDTFSQHHLEALECPFERQHYPEAY 250


>FB|FBgn0001148 [details] [associations]
            symbol:gsb "gooseberry" species:7227 "Drosophila
            melanogaster" [GO:0000977 "RNA polymerase II regulatory region
            sequence-specific DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005667 "transcription factor
            complex" evidence=ISS] [GO:0007367 "segment polarity determination"
            evidence=NAS] [GO:0005634 "nucleus" evidence=IMP;NAS] [GO:0007419
            "ventral cord development" evidence=TAS] [GO:0007435 "salivary
            gland morphogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
            evidence=IMP] [GO:0007268 "synaptic transmission" evidence=IDA]
            [GO:0060025 "regulation of synaptic activity" evidence=IDA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00034
            PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 SMART:SM00389
            EMBL:AE013599 GO:GO:0005634 GO:GO:0005737 GO:GO:0007435
            GO:GO:0007419 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007367
            GO:GO:0000977 eggNOG:NOG326044 GeneTree:ENSGT00680000099553
            KO:K09381 OrthoDB:EOG42BVRM EMBL:M14944 EMBL:M14942 PIR:A43698
            RefSeq:NP_523863.1 UniGene:Dm.23955 ProteinModelPortal:P09082
            SMR:P09082 DIP:DIP-18421N IntAct:P09082 MINT:MINT-1012438
            STRING:P09082 PRIDE:P09082 EnsemblMetazoa:FBtr0072444 GeneID:38005
            KEGG:dme:Dmel_CG3388 CTD:38005 FlyBase:FBgn0001148
            HOGENOM:HOG000264208 InParanoid:P09082 OMA:RIFARTQ PhylomeDB:P09082
            GenomeRNAi:38005 NextBio:806506 Bgee:P09082 GermOnline:CG3388
            GO:GO:0060025 Uniprot:P09082
        Length = 427

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 73/111 (65%), Positives = 83/111 (74%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             MAAAGVRPCVISRQLRVSHGCVSKILNR+QETGSIRPGVIGGSKPRVATPD+E RIEE K
Sbjct:    47 MAAAGVRPCVISRQLRVSHGCVSKILNRFQETGSIRPGVIGGSKPRVATPDIESRIEELK 106

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLE 111
             ++ P I SWE+R KLI+    D  +  S   I   R  R S  + TS  ++
Sbjct:   107 QSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSI--SRLLRGSSGSGTSHSID 155

 Score = 198 (74.8 bits), Expect = 3.6e-15, P = 3.6e-15
 Identities = 36/62 (58%), Positives = 49/62 (79%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             D+S+ ++EP + LKRKQRRSRTTF++ Q++ LE+ F R+ YPD+YTRE LA   G+TE R
Sbjct:   169 DESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEAR 228

Query:   142 VQ 143
             VQ
Sbjct:   229 VQ 230


>UNIPROTKB|O57685 [details] [associations]
            symbol:pax2-a "Paired box protein Pax-2-A" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0005634 GO:GO:0003677
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0007367 HOVERGEN:HBG009115
            KO:K15608 InterPro:IPR022130 Pfam:PF12403 EMBL:Y10119 EMBL:Y10121
            EMBL:Y10122 EMBL:Y10123 EMBL:AJ000667 EMBL:BC055960
            RefSeq:NP_001079830.1 UniGene:Xl.1130 HSSP:Q02548
            ProteinModelPortal:O57685 SMR:O57685 GeneID:379520 KEGG:xla:379520
            CTD:379520 Xenbase:XB-GENE-486805 Uniprot:O57685
        Length = 497

 Score = 298 (110.0 bits), Expect = 7.7e-32, Sum P(2) = 7.7e-32
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AEGICDNDT 128

 Score = 75 (31.5 bits), Expect = 7.7e-32, Sum P(2) = 7.7e-32
 Identities = 17/49 (34%), Positives = 29/49 (59%)

Query:    87 ESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIY-TREALANK 134
             +S+  +   RK  R+   FT  QLE L++ F+R  YPD++ T E + ++
Sbjct:   216 DSQSSVESLRKHLRA-DNFTQQQLEALDRVFERPSYPDVFQTAEHIKSE 263


>ZFIN|ZDB-GENE-001030-4 [details] [associations]
            symbol:pax2b "paired box gene 2b" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007422 "peripheral nervous
            system development" evidence=IGI] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 ZFIN:ZDB-GENE-001030-4 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 HOVERGEN:HBG009115
            HOGENOM:HOG000230938 InterPro:IPR022130 Pfam:PF12403 HSSP:Q02548
            OrthoDB:EOG49S66H EMBL:AF072547 EMBL:BC162214 IPI:IPI00505608
            RefSeq:NP_571715.1 UniGene:Dr.81269 SMR:O93370 STRING:O93370
            GeneID:60638 KEGG:dre:60638 CTD:60638 NextBio:20892424
            Uniprot:O93370
        Length = 386

 Score = 295 (108.9 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
 Identities = 56/86 (65%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I +YK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AEGICDNDT 127

 Score = 69 (29.3 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
 Identities = 14/41 (34%), Positives = 25/41 (60%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIY 126
             ++S+  +   RK  R+   FT  QLE L++ F+R  +PD++
Sbjct:   212 SDSQGSVESLRKHLRA-DAFTQQQLEALDRVFERPAFPDVF 251


>RGD|620434 [details] [associations]
            symbol:Pax8 "paired box 8" species:10116 "Rattus norvegicus"
            [GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
            binding" evidence=ISO;ISS] [GO:0001077 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=IDA] [GO:0001655 "urogenital system
            development" evidence=ISO;ISS] [GO:0001656 "metanephros
            development" evidence=ISO] [GO:0001658 "branching involved in
            ureteric bud morphogenesis" evidence=ISO] [GO:0001822 "kidney
            development" evidence=ISO] [GO:0001823 "mesonephros development"
            evidence=ISO;ISS] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=ISO] [GO:0003677
            "DNA binding" evidence=IEA;ISO;ISS;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO;ISS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005654
            "nucleoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA;ISO] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;IMP] [GO:0006790 "sulfur
            compound metabolic process" evidence=IEP] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007417
            "central nervous system development" evidence=ISO] [GO:0030154
            "cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
            development" evidence=ISO;ISS] [GO:0039003 "pronephric field
            specification" evidence=ISS] [GO:0042472 "inner ear morphogenesis"
            evidence=ISO] [GO:0042981 "regulation of apoptotic process"
            evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISO;ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;IDA] [GO:0048793 "pronephros development"
            evidence=ISO;ISS] [GO:0071371 "cellular response to gonadotropin
            stimulus" evidence=ISO] [GO:0071599 "otic vesicle development"
            evidence=ISO] [GO:0072108 "positive regulation of mesenchymal to
            epithelial transition involved in metanephros morphogenesis"
            evidence=ISO;ISS] [GO:0072207 "metanephric epithelium development"
            evidence=ISO] [GO:0072221 "metanephric distal convoluted tubule
            development" evidence=ISO;ISS] [GO:0072278 "metanephric
            comma-shaped body morphogenesis" evidence=ISO] [GO:0072284
            "metanephric S-shaped body morphogenesis" evidence=ISO] [GO:0072289
            "metanephric nephron tubule formation" evidence=ISO;ISS]
            [GO:0072305 "negative regulation of mesenchymal cell apoptotic
            process involved in metanephric nephron morphogenesis"
            evidence=ISO;ISS] [GO:0072307 "regulation of metanephric nephron
            tubule epithelial cell differentiation" evidence=ISO;ISS]
            [GO:0090190 "positive regulation of branching involved in ureteric
            bud morphogenesis" evidence=ISO;ISS] [GO:1900212 "negative
            regulation of mesenchymal cell apoptotic process involved in
            metanephros development" evidence=ISO;ISS] [GO:1900215 "negative
            regulation of apoptotic process involved in metanephric collecting
            duct development" evidence=ISO;ISS] [GO:1900218 "negative
            regulation of apoptotic process involved in metanephric nephron
            tubule development" evidence=ISO;ISS] [GO:2000594 "positive
            regulation of metanephric DCT cell differentiation"
            evidence=ISO;ISS] [GO:2000611 "positive regulation of thyroid
            hormone generation" evidence=ISO;ISS] [GO:2000612 "regulation of
            thyroid-stimulating hormone secretion" evidence=ISO;ISS]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 RGD:620434 GO:GO:0005654
            GO:GO:0007417 Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF46689
            GO:GO:0001077 GO:GO:0042472 GO:GO:0090190 GO:GO:0071599
            GO:GO:0001658 GO:GO:0000979 GO:GO:0006790 GO:GO:0003337
            GO:GO:0001823 GO:GO:0072221 GO:GO:0071371 GO:GO:0030878
            GO:GO:2000611 GO:GO:0072108 eggNOG:NOG326044 GO:GO:0072278
            GO:GO:0072284 GO:GO:0039003 GO:GO:0072307 HOVERGEN:HBG009115
            HOGENOM:HOG000230938 InterPro:IPR022130 Pfam:PF12403 GO:GO:0072289
            GO:GO:1900215 GO:GO:1900218 GO:GO:0072305 GO:GO:2000594 CTD:7849
            KO:K09293 GO:GO:2000612 GO:GO:0072164 OrthoDB:EOG42NJ0G EMBL:X94246
            EMBL:BC081779 IPI:IPI00207402 RefSeq:NP_112403.2 UniGene:Rn.10392
            ProteinModelPortal:P51974 SMR:P51974 IntAct:P51974 STRING:P51974
            PhosphoSite:P51974 Ensembl:ENSRNOT00000019088 GeneID:81819
            KEGG:rno:81819 UCSC:RGD:620434 InParanoid:P51974 NextBio:615735
            ArrayExpress:P51974 Genevestigator:P51974
            GermOnline:ENSRNOG00000026203 Uniprot:P51974
        Length = 457

 Score = 298 (110.0 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
 Identities = 57/86 (66%), Positives = 70/86 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSIRPGVIGGSKP+VATP V ++I +YK
Sbjct:    37 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYK 96

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:    97 RQNPTMFAWEIRDRLL-AEGVCDNDT 121

 Score = 69 (29.3 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
 Identities = 19/53 (35%), Positives = 27/53 (50%)

Query:    80 RLDDSDTES-----EPGIVLKRKQRRSRT-TFTSAQLEELEKSFQRSHYPDIY 126
             ++DDSD +S     +        ++  RT TF    LE LE  F+R HYP+ Y
Sbjct:   198 KMDDSDQDSCRLSIDSQSSSSGPRKHLRTDTFGQHHLEPLECPFERQHYPEAY 250


>UNIPROTKB|Q06710 [details] [associations]
            symbol:PAX8 "Paired box protein Pax-8" species:9606 "Homo
            sapiens" [GO:0072164 "mesonephric tubule development" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS;IDA] [GO:0005654 "nucleoplasm" evidence=ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
            binding" evidence=IMP;IDA] [GO:0000979 "RNA polymerase II core
            promoter sequence-specific DNA binding" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0001823 "mesonephros development"
            evidence=ISS] [GO:0042981 "regulation of apoptotic process"
            evidence=ISS] [GO:0048793 "pronephros development" evidence=ISS]
            [GO:0030878 "thyroid gland development" evidence=IEP;IMP]
            [GO:0071599 "otic vesicle development" evidence=IEP] [GO:0001822
            "kidney development" evidence=IEP] [GO:0007417 "central nervous
            system development" evidence=IEP] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IDA] [GO:2000611 "positive
            regulation of thyroid hormone generation" evidence=IMP] [GO:2000612
            "regulation of thyroid-stimulating hormone secretion" evidence=IMP]
            [GO:0072207 "metanephric epithelium development" evidence=IEP]
            [GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEP]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IEP] [GO:0072278 "metanephric comma-shaped body
            morphogenesis" evidence=IEP] [GO:1900215 "negative regulation of
            apoptotic process involved in metanephric collecting duct
            development" evidence=ISS] [GO:0072221 "metanephric distal
            convoluted tubule development" evidence=ISS] [GO:0072289
            "metanephric nephron tubule formation" evidence=ISS] [GO:0072305
            "negative regulation of mesenchymal cell apoptotic process involved
            in metanephric nephron morphogenesis" evidence=ISS] [GO:0072307
            "regulation of metanephric nephron tubule epithelial cell
            differentiation" evidence=ISS] [GO:0090190 "positive regulation of
            branching involved in ureteric bud morphogenesis" evidence=ISS]
            [GO:0003337 "mesenchymal to epithelial transition involved in
            metanephros morphogenesis" evidence=IEP] [GO:0006351
            "transcription, DNA-dependent" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:2000594 "positive regulation of metanephric DCT
            cell differentiation" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0001655 "urogenital system development"
            evidence=ISS] [GO:0039003 "pronephric field specification"
            evidence=ISS] [GO:0072108 "positive regulation of mesenchymal to
            epithelial transition involved in metanephros morphogenesis"
            evidence=ISS] [GO:0071371 "cellular response to gonadotropin
            stimulus" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
            evidence=ISS] [GO:1900212 "negative regulation of mesenchymal cell
            apoptotic process involved in metanephros development"
            evidence=ISS] [GO:1900218 "negative regulation of apoptotic process
            involved in metanephric nephron tubule development" evidence=ISS]
            [GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
            [GO:0004996 "thyroid-stimulating hormone receptor activity"
            evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0045893
            GO:GO:0005654 GO:GO:0045944 GO:GO:0007417 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0090190 GO:GO:0071599 GO:GO:0001658
            GO:GO:0000979 GO:GO:0003337 GO:GO:0001823 GO:GO:0072221
            EMBL:CH471217 GO:GO:0071371 GO:GO:0030878 Orphanet:95713
            Orphanet:95720 GO:GO:2000611 GO:GO:0072108 eggNOG:NOG326044
            GO:GO:0072278 GO:GO:0072284 GO:GO:0039003 GO:GO:0072307
            HOVERGEN:HBG009115 InterPro:IPR022130 Pfam:PF12403 GO:GO:0072289
            GO:GO:1900215 GO:GO:1900218 GO:GO:0072305 GO:GO:2000594 CTD:7849
            KO:K09293 OMA:EQGLYPL GO:GO:2000612 EMBL:X69699 EMBL:L19606
            EMBL:S77904 EMBL:S77905 EMBL:S77906 EMBL:AK292191 EMBL:AC016683
            EMBL:BC001060 IPI:IPI00183926 IPI:IPI00221027 IPI:IPI00306346
            IPI:IPI00335892 IPI:IPI00790594 PIR:A54429 PIR:I53340
            RefSeq:NP_003457.1 RefSeq:NP_039246.1 RefSeq:NP_039247.1
            RefSeq:NP_054698.1 UniGene:Hs.469728 PDB:2K27 PDBsum:2K27
            ProteinModelPortal:Q06710 SMR:Q06710 IntAct:Q06710 STRING:Q06710
            PhosphoSite:Q06710 DMDM:215273928 PaxDb:Q06710 PRIDE:Q06710
            DNASU:7849 Ensembl:ENST00000263334 Ensembl:ENST00000263335
            Ensembl:ENST00000348715 Ensembl:ENST00000397647
            Ensembl:ENST00000429538 GeneID:7849 KEGG:hsa:7849 UCSC:uc002tjm.3
            UCSC:uc002tjn.3 UCSC:uc010fku.1 UCSC:uc010yxu.2
            GeneCards:GC02M113973 HGNC:HGNC:8622 HPA:HPA030062 MIM:167415
            MIM:218700 neXtProt:NX_Q06710 PharmGKB:PA32962 InParanoid:Q06710
            ChiTaRS:PAX8 EvolutionaryTrace:Q06710 GenomeRNAi:7849 NextBio:30264
            ArrayExpress:Q06710 Bgee:Q06710 CleanEx:HS_PAX8
            Genevestigator:Q06710 GermOnline:ENSG00000125618 GO:GO:0004996
            GO:GO:0072164 Uniprot:Q06710
        Length = 450

 Score = 298 (110.0 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 57/86 (66%), Positives = 70/86 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSIRPGVIGGSKP+VATP V ++I +YK
Sbjct:    37 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYK 96

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:    97 RQNPTMFAWEIRDRLL-AEGVCDNDT 121

 Score = 67 (28.6 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query:    80 RLDDSDTES-----EPGIVLKRKQRRSRT-TFTSAQLEELEKSFQRSHYPDIY 126
             ++DDSD +S     +        ++  RT  F+   LE LE  F+R HYP+ Y
Sbjct:   197 KMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQHYPEAY 249


>UNIPROTKB|P47240 [details] [associations]
            symbol:PAX8 "Paired box protein Pax-8" species:9615 "Canis
            lupus familiaris" [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISS] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=ISS] [GO:1900212 "negative regulation of
            mesenchymal cell apoptotic process involved in metanephros
            development" evidence=ISS] [GO:2000594 "positive regulation of
            metanephric DCT cell differentiation" evidence=ISS] [GO:0030878
            "thyroid gland development" evidence=ISS] [GO:0090190 "positive
            regulation of branching involved in ureteric bud morphogenesis"
            evidence=ISS] [GO:0072307 "regulation of metanephric nephron tubule
            epithelial cell differentiation" evidence=ISS] [GO:0072305
            "negative regulation of mesenchymal cell apoptotic process involved
            in metanephric nephron morphogenesis" evidence=ISS] [GO:0072289
            "metanephric nephron tubule formation" evidence=ISS] [GO:0072221
            "metanephric distal convoluted tubule development" evidence=ISS]
            [GO:1900215 "negative regulation of apoptotic process involved in
            metanephric collecting duct development" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0000979 "RNA polymerase II core
            promoter sequence-specific DNA binding" evidence=ISS] [GO:2000612
            "regulation of thyroid-stimulating hormone secretion" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:2000611 "positive regulation of thyroid
            hormone generation" evidence=ISS] [GO:0048793 "pronephros
            development" evidence=ISS] [GO:0042981 "regulation of apoptotic
            process" evidence=ISS] [GO:0001823 "mesonephros development"
            evidence=ISS] [GO:0072108 "positive regulation of mesenchymal to
            epithelial transition involved in metanephros morphogenesis"
            evidence=ISS] [GO:0039003 "pronephric field specification"
            evidence=ISS] [GO:0001655 "urogenital system development"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 GO:GO:0045893 GO:GO:0005654 GO:GO:0030154
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0090190 GO:GO:0000979 GO:GO:0001823
            GO:GO:0072221 GO:GO:0030878 GO:GO:2000611 GO:GO:0072108
            eggNOG:NOG326044 GO:GO:0039003 GO:GO:0072307 HOVERGEN:HBG009115
            HOGENOM:HOG000230938 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 GO:GO:0072289 GO:GO:1900215
            GO:GO:1900218 GO:GO:0072305 GO:GO:2000594 EMBL:X83591 EMBL:X83592
            PIR:S70361 PIR:S70362 RefSeq:NP_001003248.1 UniGene:Cfa.3789
            ProteinModelPortal:P47240 SMR:P47240 STRING:P47240
            Ensembl:ENSCAFT00000011697 Ensembl:ENSCAFT00000011704 GeneID:403927
            KEGG:cfa:403927 CTD:7849 KO:K09293 OMA:EQGLYPL NextBio:20817418
            GO:GO:2000612 Uniprot:P47240
        Length = 459

 Score = 298 (110.0 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
 Identities = 57/86 (66%), Positives = 70/86 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSIRPGVIGGSKP+VATP V ++I +YK
Sbjct:    37 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYK 96

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:    97 RQNPTMFAWEIRDRLL-AEGVCDNDT 121

 Score = 67 (28.6 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query:    80 RLDDSDTES-----EPGIVLKRKQRRSRT-TFTSAQLEELEKSFQRSHYPDIY 126
             ++DDSD +S     +        ++  RT  F+   LE LE  F+R HYP+ Y
Sbjct:   198 KMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQHYPEAY 250


>UNIPROTKB|O57682 [details] [associations]
            symbol:pax2-b "Paired box protein Pax-2-B" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0048793 "pronephros
            development" evidence=IGI] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0007367 GO:GO:0048793 HOVERGEN:HBG009115
            InterPro:IPR022130 Pfam:PF12403 HSSP:Q02548 EMBL:Y10120
            EMBL:AJ000668 EMBL:AF179300 EMBL:BC077463 ProteinModelPortal:O57682
            SMR:O57682 Uniprot:O57682
        Length = 494

 Score = 295 (108.9 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
 Identities = 56/86 (65%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I +YK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AEGICDNDT 127

 Score = 74 (31.1 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
 Identities = 15/40 (37%), Positives = 24/40 (60%)

Query:    87 ESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIY 126
             +S+  +   RK  R+   FT  QLE L++ F+R  YPD++
Sbjct:   213 DSQSSVESLRKHLRA-DNFTQQQLEALDRVFERPSYPDVF 251


>UNIPROTKB|I3LAG7 [details] [associations]
            symbol:PAX3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060594 "mammary
            gland specification" evidence=IEA] [GO:0048663 "neuron fate
            commitment" evidence=IEA] [GO:0048066 "developmental pigmentation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0001843 "neural tube closure"
            evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
            GO:GO:0008284 GO:GO:0008283 GO:GO:0001755 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000122
            GO:GO:0007517 GO:GO:0001843 GO:GO:0021527 GO:GO:0048663
            GO:GO:0048066 GO:GO:0060594 GeneTree:ENSGT00680000099553
            InterPro:IPR022106 Pfam:PF12360 OMA:VHQSTLP
            Ensembl:ENSSSCT00000032547 Uniprot:I3LAG7
        Length = 483

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/125 (56%), Positives = 89/125 (71%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ V TPDVEK+IEEY
Sbjct:    60 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEY 119

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQLEELEKSF 117
             K+ NP + SWE+RDKL+K +  D +   S   I  +L+ K  +        + +E E+S 
Sbjct:   120 KRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESE 179

Query:   118 QRSHY 122
             +++ +
Sbjct:   180 KKTKH 184

 Score = 234 (87.4 bits), Expect = 5.8e-19, P = 5.8e-19
 Identities = 54/104 (51%), Positives = 70/104 (67%)

Query:    51 DVE-KRIEEY-KKTNPNITSWEVRDKLIKVSRLDD-SDTESEPGIVLKRKQRRSRTTFTS 107
             D+E K  EE  KKT  +I    +  +     + D+ SD +SEP + LKRKQRRSRTTFT+
Sbjct:   169 DLERKEAEESEKKTKHSIDG--ILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTA 226

Query:   108 AQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQQFVLGTAG 151
              QLEELE++F+R+HYPDIYTRE LA +  +TE RVQ+  L   G
Sbjct:   227 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQRLWLSLRG 270


>UNIPROTKB|F1MTX0 [details] [associations]
            symbol:PAX3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060594 "mammary
            gland specification" evidence=IEA] [GO:0048663 "neuron fate
            commitment" evidence=IEA] [GO:0048066 "developmental pigmentation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0001843 "neural tube closure"
            evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 GO:GO:0005634 GO:GO:0007507 GO:GO:0008284
            GO:GO:0008283 GO:GO:0001755 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0003705 GO:GO:0000122 GO:GO:0007517 GO:GO:0001843
            GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
            GeneTree:ENSGT00680000099553 KO:K09381 InterPro:IPR022106
            Pfam:PF12360 CTD:5077 OMA:VHQSTLP EMBL:DAAA02006005 IPI:IPI01001137
            RefSeq:NP_001193747.1 UniGene:Bt.112037 Ensembl:ENSBTAT00000013131
            GeneID:540951 KEGG:bta:540951 NextBio:20878929 Uniprot:F1MTX0
        Length = 484

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/125 (56%), Positives = 89/125 (71%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ V TPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQLEELEKSF 117
             K+ NP + SWE+RDKL+K +  D +   S   I  +L+ K  +        + +E E+S 
Sbjct:   122 KRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESE 181

Query:   118 QRSHY 122
             +++ +
Sbjct:   182 KKAKH 186

 Score = 224 (83.9 bits), Expect = 7.3e-18, P = 7.3e-18
 Identities = 48/94 (51%), Positives = 64/94 (68%)

Query:    51 DVE-KRIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQ 109
             D+E K  EE +K   +     + ++       + SD +SEP + LKRKQRRSRTTFT+ Q
Sbjct:   171 DLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQ 230

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LEELE++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   231 LEELERAFERTHYPDIYTREELAQRAKLTEARVQ 264


>UNIPROTKB|E2QX72 [details] [associations]
            symbol:PAX3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
            OMA:VHQSTLP EMBL:AAEX03018179 EMBL:AAEX03018180 EMBL:AAEX03018181
            Ensembl:ENSCAFT00000025445 Uniprot:E2QX72
        Length = 485

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/125 (56%), Positives = 89/125 (71%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ V TPDVEK+IEEY
Sbjct:    63 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEY 122

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQLEELEKSF 117
             K+ NP + SWE+RDKL+K +  D +   S   I  +L+ K  +        + +E E+S 
Sbjct:   123 KRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESE 182

Query:   118 QRSHY 122
             +++ +
Sbjct:   183 KKAKH 187

 Score = 224 (83.9 bits), Expect = 7.3e-18, P = 7.3e-18
 Identities = 48/94 (51%), Positives = 64/94 (68%)

Query:    51 DVE-KRIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQ 109
             D+E K  EE +K   +     + ++       + SD +SEP + LKRKQRRSRTTFT+ Q
Sbjct:   172 DLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQ 231

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LEELE++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   232 LEELERAFERTHYPDIYTREELAQRAKLTEARVQ 265


>UNIPROTKB|P23760 [details] [associations]
            symbol:PAX3 "Paired box protein Pax-3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0007605 "sensory perception of sound"
            evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
            [GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            GO:GO:0006915 GO:GO:0007507 GO:GO:0008284 GO:GO:0008283
            EMBL:CH471063 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000122
            GO:GO:0009887 GO:GO:0006366 GO:GO:0007517 GO:GO:0007605
            GO:GO:0001843 GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 MIM:268220
            Orphanet:99756 GO:GO:0060594 eggNOG:NOG326044 KO:K09381
            EMBL:AY633656 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
            EMBL:AY251279 EMBL:AY251280 EMBL:AK291278 EMBL:AC010980
            EMBL:AC012591 EMBL:BC063547 EMBL:BC101299 EMBL:BC101300
            EMBL:BC101301 EMBL:BC101302 EMBL:BC114363 EMBL:U12263 EMBL:U12259
            EMBL:U12258 EMBL:U12260 EMBL:U12262 EMBL:X15043 EMBL:X15252
            EMBL:X15253 EMBL:Z29972 EMBL:Z29973 EMBL:Z29974 EMBL:S69369
            EMBL:S69370 EMBL:S83614 EMBL:L10614 IPI:IPI00012896 IPI:IPI00219092
            IPI:IPI00219093 IPI:IPI00375387 IPI:IPI00895878 PIR:I54276
            PIR:I68547 PIR:S06960 RefSeq:NP_000429.2 RefSeq:NP_001120838.1
            RefSeq:NP_039230.1 RefSeq:NP_852122.1 RefSeq:NP_852123.1
            RefSeq:NP_852124.1 RefSeq:NP_852125.1 RefSeq:NP_852126.1
            UniGene:Hs.42146 PDB:3CMY PDBsum:3CMY ProteinModelPortal:P23760
            SMR:P23760 IntAct:P23760 MINT:MINT-202884 STRING:P23760
            PhosphoSite:P23760 DMDM:1172022 PRIDE:P23760 DNASU:5077
            Ensembl:ENST00000258387 Ensembl:ENST00000336840
            Ensembl:ENST00000344493 Ensembl:ENST00000350526
            Ensembl:ENST00000392069 Ensembl:ENST00000392070
            Ensembl:ENST00000409551 Ensembl:ENST00000409828 GeneID:5077
            KEGG:hsa:5077 UCSC:uc002vmw.2 UCSC:uc002vmz.2 UCSC:uc002vna.2
            CTD:5077 GeneCards:GC02M223064 HGNC:HGNC:8617 HPA:CAB013466
            MIM:122880 MIM:148820 MIM:193500 MIM:606597 neXtProt:NX_P23760
            Orphanet:1529 Orphanet:894 Orphanet:896 PharmGKB:PA32957
            HOGENOM:HOG000230939 OMA:VHQSTLP ChiTaRS:PAX3
            EvolutionaryTrace:P23760 GenomeRNAi:5077 NextBio:19572
            ArrayExpress:P23760 Bgee:P23760 CleanEx:HS_PAX3
            Genevestigator:P23760 GermOnline:ENSG00000135903 Uniprot:P23760
        Length = 479

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/125 (56%), Positives = 89/125 (71%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ V TPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQLEELEKSF 117
             K+ NP + SWE+RDKL+K +  D +   S   I  +L+ K  +        + +E E+S 
Sbjct:   122 KRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESE 181

Query:   118 QRSHY 122
             +++ +
Sbjct:   182 KKAKH 186

 Score = 224 (83.9 bits), Expect = 7.1e-18, P = 7.1e-18
 Identities = 48/94 (51%), Positives = 64/94 (68%)

Query:    51 DVE-KRIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQ 109
             D+E K  EE +K   +     + ++       + SD +SEP + LKRKQRRSRTTFT+ Q
Sbjct:   171 DLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQ 230

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LEELE++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   231 LEELERAFERTHYPDIYTREELAQRAKLTEARVQ 264


>MGI|MGI:97487 [details] [associations]
            symbol:Pax3 "paired box gene 3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IGI] [GO:0001755 "neural crest
            cell migration" evidence=IMP] [GO:0001843 "neural tube closure"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=TAS]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IGI;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007507 "heart development"
            evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
            [GO:0008283 "cell proliferation" evidence=IMP] [GO:0008284
            "positive regulation of cell proliferation" evidence=IMP]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0021527 "spinal cord
            association neuron differentiation" evidence=IGI] [GO:0021915
            "neural tube development" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IDA] [GO:0048066
            "developmental pigmentation" evidence=IMP] [GO:0048663 "neuron fate
            commitment" evidence=IGI] [GO:0060594 "mammary gland specification"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97487
            GO:GO:0008284 GO:GO:0008283 GO:GO:0001755 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0055007 GO:GO:0001843 GO:GO:0035914
            GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
            eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
            HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360 CTD:5077
            HOGENOM:HOG000230939 ChiTaRS:PAX3 EMBL:X59358 EMBL:AK014337
            EMBL:AK045018 EMBL:AK148354 EMBL:S66429 EMBL:S66433 IPI:IPI00625217
            PIR:S15031 RefSeq:NP_001152992.1 RefSeq:NP_032807.3 UniGene:Mm.1371
            ProteinModelPortal:P24610 SMR:P24610 IntAct:P24610
            MINT:MINT-4653013 STRING:P24610 PhosphoSite:P24610 PRIDE:P24610
            Ensembl:ENSMUST00000087086 GeneID:18505 KEGG:mmu:18505
            UCSC:uc007bqb.2 NextBio:294224 Bgee:P24610 CleanEx:MM_PAX3
            Genevestigator:P24610 GermOnline:ENSMUSG00000004872 Uniprot:P24610
        Length = 479

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/125 (56%), Positives = 89/125 (71%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ V TPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQLEELEKSF 117
             K+ NP + SWE+RDKL+K +  D +   S   I  +L+ K  +        + +E E+S 
Sbjct:   122 KRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESE 181

Query:   118 QRSHY 122
             +++ +
Sbjct:   182 KKAKH 186

 Score = 224 (83.9 bits), Expect = 7.1e-18, P = 7.1e-18
 Identities = 48/94 (51%), Positives = 64/94 (68%)

Query:    51 DVE-KRIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQ 109
             D+E K  EE +K   +     + ++       + SD +SEP + LKRKQRRSRTTFT+ Q
Sbjct:   171 DLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQ 230

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LEELE++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   231 LEELERAFERTHYPDIYTREELAQRAKLTEARVQ 264


>UNIPROTKB|F1LMV3 [details] [associations]
            symbol:Pax3 "Protein Pax3" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IEA] [GO:0001755 "neural crest
            cell migration" evidence=IEA] [GO:0001843 "neural tube closure"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007507 "heart development"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0021527 "spinal cord association neuron differentiation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048066 "developmental pigmentation"
            evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
            [GO:0060594 "mammary gland specification" evidence=IEA] [GO:0071837
            "HMG box domain binding" evidence=IPI] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 RGD:620431 GO:GO:0005634 GO:GO:0007507 GO:GO:0008284
            GO:GO:0008283 GO:GO:0001755 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0003705 GO:GO:0000122 GO:GO:0007517 GO:GO:0001843
            GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
            GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
            OMA:VHQSTLP IPI:IPI00765155 Ensembl:ENSRNOT00000018652
            ArrayExpress:F1LMV3 Uniprot:F1LMV3
        Length = 487

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/125 (56%), Positives = 89/125 (71%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ V TPDVEK+IEEY
Sbjct:    65 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEY 124

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQLEELEKSF 117
             K+ NP + SWE+RDKL+K +  D +   S   I  +L+ K  +        + +E E+S 
Sbjct:   125 KRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESE 184

Query:   118 QRSHY 122
             +++ +
Sbjct:   185 KKAKH 189

 Score = 224 (83.9 bits), Expect = 7.4e-18, P = 7.4e-18
 Identities = 48/94 (51%), Positives = 64/94 (68%)

Query:    51 DVE-KRIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQ 109
             D+E K  EE +K   +     + ++       + SD +SEP + LKRKQRRSRTTFT+ Q
Sbjct:   174 DLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQ 233

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LEELE++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   234 LEELERAFERTHYPDIYTREELAQRAKLTEARVQ 267


>UNIPROTKB|Q0IH87 [details] [associations]
            symbol:pax3-b "Paired box protein Pax-3-B" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008543
            "fibroblast growth factor receptor signaling pathway" evidence=IGI]
            [GO:0014029 "neural crest formation" evidence=IGI;IMP] [GO:0014034
            "neural crest cell fate commitment" evidence=IMP] [GO:0016055 "Wnt
            receptor signaling pathway" evidence=IGI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048785 "hatching gland development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0008543
            GO:GO:0045893 GO:GO:0007399 GO:GO:0016055 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0014034 KO:K09381
            HOVERGEN:HBG009115 GO:GO:0048785 InterPro:IPR022106 Pfam:PF12360
            EMBL:AY757359 EMBL:AY725268 EMBL:BC123263 RefSeq:NP_001088994.1
            UniGene:Xl.54870 GeneID:496377 KEGG:xla:496377 CTD:496377
            Xenbase:XB-GENE-6252072 Uniprot:Q0IH87
        Length = 483

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 73/132 (55%), Positives = 90/132 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+V TP+VEK+IEE+K
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKVTTPEVEKKIEEFK 121

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQLEELEKSFQ 118
             + NP + SWE+RDKL+K    D +   S   I  +L+ K  +          +E E+S +
Sbjct:   122 RDNPGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGDEEDMELDRKEQEESEK 181

Query:   119 RS-HYPDIYTRE 129
             R+ H  D   RE
Sbjct:   182 RAKHSIDGILRE 193

 Score = 221 (82.9 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             + SD +SEP + LKRKQRRSRTTFT+ QLEELE++F+R+HYPDIYTRE LA +  +TE R
Sbjct:   203 EGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEAR 262

Query:   142 VQ 143
             VQ
Sbjct:   263 VQ 264


>UNIPROTKB|F1MLH9 [details] [associations]
            symbol:PAX8 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000612 "regulation
            of thyroid-stimulating hormone secretion" evidence=IEA] [GO:2000611
            "positive regulation of thyroid hormone generation" evidence=IEA]
            [GO:2000594 "positive regulation of metanephric DCT cell
            differentiation" evidence=IEA] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=IEA] [GO:1900215 "negative regulation of
            apoptotic process involved in metanephric collecting duct
            development" evidence=IEA] [GO:0090190 "positive regulation of
            branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:0072307 "regulation of metanephric nephron tubule epithelial
            cell differentiation" evidence=IEA] [GO:0072305 "negative
            regulation of mesenchymal cell apoptotic process involved in
            metanephric nephron morphogenesis" evidence=IEA] [GO:0072289
            "metanephric nephron tubule formation" evidence=IEA] [GO:0072284
            "metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0072278
            "metanephric comma-shaped body morphogenesis" evidence=IEA]
            [GO:0072221 "metanephric distal convoluted tubule development"
            evidence=IEA] [GO:0072164 "mesonephric tubule development"
            evidence=IEA] [GO:0072108 "positive regulation of mesenchymal to
            epithelial transition involved in metanephros morphogenesis"
            evidence=IEA] [GO:0071599 "otic vesicle development" evidence=IEA]
            [GO:0071371 "cellular response to gonadotropin stimulus"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
            evidence=IEA] [GO:0039003 "pronephric field specification"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0003337 "mesenchymal to epithelial
            transition involved in metanephros morphogenesis" evidence=IEA]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0005634 GO:GO:0045893
            GO:GO:0007417 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0090190
            GO:GO:0071599 GO:GO:0001658 GO:GO:0000979 GO:GO:0003337
            GO:GO:0072221 GO:GO:0071371 GO:GO:0030878 GO:GO:2000611
            GO:GO:0072108 GO:GO:0072278 GO:GO:0072284 GO:GO:0039003
            GO:GO:0072307 GeneTree:ENSGT00680000099910 InterPro:IPR022130
            Pfam:PF12403 GO:GO:0072289 GO:GO:1900215 GO:GO:1900218
            GO:GO:0072305 GO:GO:2000594 OMA:EQGLYPL GO:GO:2000612 GO:GO:0072164
            EMBL:DAAA02031095 IPI:IPI00696502 Ensembl:ENSBTAT00000025783
            Uniprot:F1MLH9
        Length = 459

 Score = 288 (106.4 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
 Identities = 57/88 (64%), Positives = 71/88 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKIL--NRYQETGSIRPGVIGGSKPRVATPDVEKRIEE 58
             +A  GVRPC ISRQLRVSHGCVSKIL  +RY ETGSIRPGVIGGSKP+VATP V ++I +
Sbjct:    37 LAHQGVRPCDISRQLRVSHGCVSKILGRSRYYETGSIRPGVIGGSKPKVATPKVVEKIGD 96

Query:    59 YKKTNPNITSWEVRDKLIKVSRLDDSDT 86
             YK+ NP + +WE+RD+L+    + D+DT
Sbjct:    97 YKRQNPTMFAWEIRDRLL-AEGVCDNDT 123

 Score = 71 (30.1 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
 Identities = 19/53 (35%), Positives = 27/53 (50%)

Query:    80 RLDDSDTES-----EPGIVLKRKQRRSRT-TFTSAQLEELEKSFQRSHYPDIY 126
             ++DDSD +S     +        ++  RT TF+   LE LE  F R HYP+ Y
Sbjct:   200 KMDDSDQDSCRLSIDSQSSSSGPRKHLRTDTFSQHHLESLECPFDRQHYPEAY 252


>MGI|MGI:97491 [details] [associations]
            symbol:Pax7 "paired box gene 7" species:10090 "Mus musculus"
            [GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
            binding transcription factor activity" evidence=IDA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005667 "transcription factor complex" evidence=TAS]
            [GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IMP]
            [GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0010453
            "regulation of cell fate commitment" evidence=IMP] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0014813
            "satellite cell commitment" evidence=IMP] [GO:0021527 "spinal cord
            association neuron differentiation" evidence=IGI] [GO:0021904
            "dorsal/ventral neural tube patterning" evidence=IDA] [GO:0031062
            "positive regulation of histone methylation" evidence=IGI;IDA]
            [GO:0043393 "regulation of protein binding" evidence=IMP]
            [GO:0043403 "skeletal muscle tissue regeneration" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0048663 "neuron fate
            commitment" evidence=IGI] [GO:0048706 "embryonic skeletal system
            development" evidence=IMP] [GO:0051216 "cartilage development"
            evidence=IMP] [GO:0060415 "muscle tissue morphogenesis"
            evidence=IGI] [GO:2000288 "positive regulation of myoblast
            proliferation" evidence=IMP] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97491
            GO:GO:0043565 GO:GO:0043393 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0006338
            GO:GO:0051216 GO:GO:0000983 GO:GO:0021527 GO:GO:0048663
            GO:GO:0048706 GO:GO:0021904 GO:GO:0043403 GO:GO:0010453
            eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
            GO:GO:0060415 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
            HOGENOM:HOG000230939 CTD:5081 OrthoDB:EOG4JM7PH GO:GO:0014813
            EMBL:AF254422 EMBL:U20792 IPI:IPI00135693 PIR:I49265
            RefSeq:NP_035169.1 UniGene:Mm.218760 ProteinModelPortal:P47239
            SMR:P47239 STRING:P47239 PhosphoSite:P47239 PRIDE:P47239
            Ensembl:ENSMUST00000030508 GeneID:18509 KEGG:mmu:18509
            InParanoid:P47239 NextBio:294240 Bgee:P47239 CleanEx:MM_PAX7
            Genevestigator:P47239 GermOnline:ENSMUSG00000028736 Uniprot:P47239
        Length = 503

 Score = 338 (124.0 bits), Expect = 1.5e-30, P = 1.5e-30
 Identities = 70/100 (70%), Positives = 78/100 (78%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR VATPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             K+ NP + SWE+RD+L+K    D S   S   I  VL+ K
Sbjct:   122 KRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIK 161

 Score = 238 (88.8 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query:    77 KVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKF 135
             K +RLD+ SD ESEP + LKRKQRRSRTTFT+ QLEELEK+F+R+HYPDIYTRE LA + 
Sbjct:   193 KGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 252

Query:   136 GMTETRVQ 143
              +TE RVQ
Sbjct:   253 KLTEARVQ 260


>RGD|1564360 [details] [associations]
            symbol:Pax7 "paired box 7" species:10116 "Rattus norvegicus"
            [GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
            binding transcription factor activity" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007519 "skeletal muscle tissue
            development" evidence=ISO] [GO:0010453 "regulation of cell fate
            commitment" evidence=ISO] [GO:0010468 "regulation of gene
            expression" evidence=ISO] [GO:0014813 "satellite cell commitment"
            evidence=IEA;ISO] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA;ISO] [GO:0021904 "dorsal/ventral
            neural tube patterning" evidence=IEA;ISO] [GO:0031062 "positive
            regulation of histone methylation" evidence=ISO] [GO:0043393
            "regulation of protein binding" evidence=ISO] [GO:0043403 "skeletal
            muscle tissue regeneration" evidence=IEA;ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0048663 "neuron fate commitment"
            evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA;ISO] [GO:0051216 "cartilage development"
            evidence=IEA;ISO] [GO:0060415 "muscle tissue morphogenesis"
            evidence=IEA;ISO] [GO:2000288 "positive regulation of myoblast
            proliferation" evidence=ISO] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:1564360
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0051216 GO:GO:0021527 GO:GO:0048663 GO:GO:0048706
            GO:GO:0021904 GO:GO:0043403 GeneTree:ENSGT00680000099553 KO:K09381
            GO:GO:0060415 InterPro:IPR022106 Pfam:PF12360 CTD:5081 OMA:NPISASC
            OrthoDB:EOG4JM7PH GO:GO:0014813 IPI:IPI00359124
            RefSeq:NP_001178913.1 UniGene:Rn.226327 Ensembl:ENSRNOT00000025488
            GeneID:500574 KEGG:rno:500574 NextBio:706635 Uniprot:D3ZRA8
        Length = 503

 Score = 338 (124.0 bits), Expect = 1.5e-30, P = 1.5e-30
 Identities = 70/100 (70%), Positives = 78/100 (78%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR VATPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             K+ NP + SWE+RD+L+K    D S   S   I  VL+ K
Sbjct:   122 KRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIK 161

 Score = 238 (88.8 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query:    77 KVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKF 135
             K +RLD+ SD ESEP + LKRKQRRSRTTFT+ QLEELEK+F+R+HYPDIYTRE LA + 
Sbjct:   193 KGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 252

Query:   136 GMTETRVQ 143
              +TE RVQ
Sbjct:   253 KLTEARVQ 260


>UNIPROTKB|Q5R9M8 [details] [associations]
            symbol:PAX8 "Paired box protein Pax-8" species:9601 "Pongo
            abelii" [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=ISS] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0030878 "thyroid gland development" evidence=ISS]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:2000611 "positive regulation of
            thyroid hormone generation" evidence=ISS] [GO:2000612 "regulation
            of thyroid-stimulating hormone secretion" evidence=ISS]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0005634
            GO:GO:0045893 GO:GO:0030154 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0000979
            GO:GO:0030878 GO:GO:2000611 HOVERGEN:HBG009115 InterPro:IPR022130
            Pfam:PF12403 HSSP:Q02548 CTD:7849 KO:K09293 GO:GO:2000612
            EMBL:CR859358 RefSeq:NP_001126820.1 RefSeq:NP_001128942.1
            UniGene:Pab.18584 ProteinModelPortal:Q5R9M8 SMR:Q5R9M8
            GeneID:100189903 KEGG:pon:100189903 InParanoid:Q5R9M8
            Uniprot:Q5R9M8
        Length = 457

 Score = 290 (107.1 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
 Identities = 57/87 (65%), Positives = 71/87 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKIL-NRYQETGSIRPGVIGGSKPRVATPDVEKRIEEY 59
             +A  GVRPC ISRQLRVSHGCVSKIL +RY ETGSIRPGVIGGSKP+VATP V ++I +Y
Sbjct:    37 LAHQGVRPCDISRQLRVSHGCVSKILGSRYYETGSIRPGVIGGSKPKVATPKVVEKIGDY 96

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDT 86
             K+ NP + +WE+RD+L+    + D+DT
Sbjct:    97 KRQNPTMFAWEIRDRLL-AEGVCDNDT 122

 Score = 67 (28.6 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query:    80 RLDDSDTES-----EPGIVLKRKQRRSRT-TFTSAQLEELEKSFQRSHYPDIY 126
             ++DDSD +S     +        ++  RT  F+   LE LE  F+R HYP+ Y
Sbjct:   198 KMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQHYPEAY 250


>UNIPROTKB|E1BKL5 [details] [associations]
            symbol:PAX7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060415 "muscle
            tissue morphogenesis" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA] [GO:0048663 "neuron fate commitment"
            evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
            evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0014813 "satellite cell
            commitment" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0021527
            GO:GO:0048663 GO:GO:0048706 GO:GO:0021904 GO:GO:0043403
            GeneTree:ENSGT00680000099553 KO:K09381 GO:GO:0060415
            InterPro:IPR022106 Pfam:PF12360 CTD:5081 OMA:NPISASC GO:GO:0014813
            EMBL:DAAA02006543 EMBL:DAAA02006544 EMBL:DAAA02006545
            EMBL:DAAA02006546 EMBL:DAAA02006547 IPI:IPI00707033
            RefSeq:XP_002685784.1 RefSeq:XP_616352.3 Ensembl:ENSBTAT00000019924
            GeneID:536229 KEGG:bta:536229 NextBio:20876914 Uniprot:E1BKL5
        Length = 505

 Score = 337 (123.7 bits), Expect = 2.1e-30, P = 2.1e-30
 Identities = 68/94 (72%), Positives = 76/94 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR VATPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIV 93
             K+ NP + SWE+RD+L+K    D S   S  G+V
Sbjct:   122 KRENPGMFSWEIRDRLLKDGHCDRSTVPS--GLV 153

 Score = 238 (88.8 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query:    77 KVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKF 135
             K +RLD+ SD ESEP + LKRKQRRSRTTFT+ QLEELEK+F+R+HYPDIYTRE LA + 
Sbjct:   195 KGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 254

Query:   136 GMTETRVQ 143
              +TE RVQ
Sbjct:   255 KLTEARVQ 262


>UNIPROTKB|F1PNX6 [details] [associations]
            symbol:PAX7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
            OMA:NPISASC EMBL:AAEX03001818 EMBL:AAEX03001819 EMBL:AAEX03001820
            EMBL:AAEX03001821 EMBL:AAEX03001822 Ensembl:ENSCAFT00000024687
            Uniprot:F1PNX6
        Length = 505

 Score = 337 (123.7 bits), Expect = 2.1e-30, P = 2.1e-30
 Identities = 68/94 (72%), Positives = 76/94 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR VATPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIV 93
             K+ NP + SWE+RD+L+K    D S   S  G+V
Sbjct:   122 KRENPGMFSWEIRDRLLKDGHCDRSTVPS--GLV 153

 Score = 238 (88.8 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query:    77 KVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKF 135
             K +RLD+ SD ESEP + LKRKQRRSRTTFT+ QLEELEK+F+R+HYPDIYTRE LA + 
Sbjct:   195 KGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 254

Query:   136 GMTETRVQ 143
              +TE RVQ
Sbjct:   255 KLTEARVQ 262


>UNIPROTKB|E9PFV9 [details] [associations]
            symbol:PAX7 "Paired box protein Pax-7" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09381
            InterPro:IPR022106 Pfam:PF12360 EMBL:AL021528 RefSeq:NP_001128726.1
            UniGene:Hs.113253 GeneID:5081 KEGG:hsa:5081 CTD:5081 HGNC:HGNC:8621
            GenomeRNAi:5081 NextBio:19602 IPI:IPI00719545
            ProteinModelPortal:E9PFV9 SMR:E9PFV9 PRIDE:E9PFV9
            Ensembl:ENST00000420770 UCSC:uc010oct.2 ArrayExpress:E9PFV9
            Bgee:E9PFV9 Uniprot:E9PFV9
        Length = 505

 Score = 337 (123.7 bits), Expect = 2.1e-30, P = 2.1e-30
 Identities = 68/94 (72%), Positives = 76/94 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR VATPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIV 93
             K+ NP + SWE+RD+L+K    D S   S  G+V
Sbjct:   122 KRENPGMFSWEIRDRLLKDGHCDRSTVPS--GLV 153

 Score = 238 (88.8 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query:    77 KVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKF 135
             K +RLD+ SD ESEP + LKRKQRRSRTTFT+ QLEELEK+F+R+HYPDIYTRE LA + 
Sbjct:   195 KGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 254

Query:   136 GMTETRVQ 143
              +TE RVQ
Sbjct:   255 KLTEARVQ 262


>UNIPROTKB|O42349 [details] [associations]
            symbol:Pax-7 "PAX7 protein" species:9031 "Gallus gallus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0048663 "neuron fate commitment"
            evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
            evidence=IEA] [GO:0014813 "satellite cell commitment" evidence=ISS]
            [GO:0043403 "skeletal muscle tissue regeneration" evidence=ISS]
            [GO:0048706 "embryonic skeletal system development" evidence=ISS]
            [GO:0007519 "skeletal muscle tissue development" evidence=ISS]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=ISS]
            [GO:0051216 "cartilage development" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216
            GO:GO:0048706 GO:GO:0021904 GO:GO:0043403 HSSP:P06601
            GeneTree:ENSGT00680000099553 KO:K09381 HOVERGEN:HBG009115
            InterPro:IPR022106 Pfam:PF12360 HOGENOM:HOG000230939 CTD:5081
            OMA:NPISASC GO:GO:0014813 EMBL:AADN02040715 EMBL:AADN02040716
            EMBL:AADN02040717 EMBL:AADN02040718 EMBL:AADN02040719
            EMBL:AADN02040720 EMBL:AADN02040721 EMBL:D87838 IPI:IPI00586304
            RefSeq:NP_990396.1 UniGene:Gga.555 SMR:O42349 STRING:O42349
            Ensembl:ENSGALT00000006002 GeneID:395942 KEGG:gga:395942
            InParanoid:O42349 NextBio:20816007 Uniprot:O42349
        Length = 524

 Score = 338 (124.0 bits), Expect = 2.2e-30, P = 2.2e-30
 Identities = 70/100 (70%), Positives = 78/100 (78%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR VATPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             K+ NP + SWE+RD+L+K    D S   S   I  VL+ K
Sbjct:   122 KRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIK 161

 Score = 240 (89.5 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 53/94 (56%), Positives = 68/94 (72%)

Query:    51 DVEKRIEEYKKTNPNITSWEVRDKLIKVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQ 109
             D +K+ E+ +K   +     + DK    +RLD+ SD ESEP + LKRKQRRSRTTFT+ Q
Sbjct:   170 DCDKKEEDGEKKAKHSIDGILGDK---GNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQ 226

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LEELEK+F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   227 LEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 260


>UNIPROTKB|F1NYC8 [details] [associations]
            symbol:PAX7 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
            EMBL:AADN02040715 EMBL:AADN02040716 EMBL:AADN02040717
            EMBL:AADN02040718 EMBL:AADN02040719 EMBL:AADN02040720
            EMBL:AADN02040721 IPI:IPI00601478 Ensembl:ENSGALT00000013968
            ArrayExpress:F1NYC8 Uniprot:F1NYC8
        Length = 503

 Score = 336 (123.3 bits), Expect = 2.6e-30, P = 2.6e-30
 Identities = 70/101 (69%), Positives = 78/101 (77%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR--VATPDVEKRIEE 58
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR  VATPDVEK+IEE
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRKQVATPDVEKKIEE 121

Query:    59 YKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             YK+ NP + SWE+RD+L+K    D S   S   I  VL+ K
Sbjct:   122 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIK 162

 Score = 240 (89.5 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 53/94 (56%), Positives = 68/94 (72%)

Query:    51 DVEKRIEEYKKTNPNITSWEVRDKLIKVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQ 109
             D +K+ E+ +K   +     + DK    +RLD+ SD ESEP + LKRKQRRSRTTFT+ Q
Sbjct:   171 DCDKKEEDGEKKAKHSIDGILGDK---GNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQ 227

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LEELEK+F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   228 LEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 261


>UNIPROTKB|P23759 [details] [associations]
            symbol:PAX7 "Paired box protein Pax-7" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0014813 "satellite cell commitment" evidence=IEA]
            [GO:0021527 "spinal cord association neuron differentiation"
            evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
            evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
            evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0060415
            "muscle tissue morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=TAS] [GO:0009653 "anatomical structure
            morphogenesis" evidence=TAS] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            GO:GO:0043066 EMBL:CH471134 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0009653
            GO:GO:0021527 GO:GO:0048663 GO:GO:0048706 GO:GO:0021904
            GO:GO:0043403 MIM:268220 Orphanet:99756 eggNOG:NOG326044 KO:K09381
            GO:GO:0060415 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
            HOGENOM:HOG000230939 EMBL:X96743 EMBL:X96744 EMBL:X15042
            EMBL:X15250 EMBL:X15251 EMBL:X96745 EMBL:X96746 EMBL:X96747
            EMBL:X96748 EMBL:AL021528 EMBL:BC121165 EMBL:BC121166 EMBL:Z35141
            IPI:IPI00004431 IPI:IPI00012894 PIR:S78502 RefSeq:NP_001128726.1
            RefSeq:NP_002575.1 RefSeq:NP_039236.1 UniGene:Hs.113253
            ProteinModelPortal:P23759 SMR:P23759 IntAct:P23759
            MINT:MINT-7241806 STRING:P23759 PhosphoSite:P23759 DMDM:8247951
            PaxDb:P23759 PRIDE:P23759 Ensembl:ENST00000375375
            Ensembl:ENST00000400661 GeneID:5081 KEGG:hsa:5081 UCSC:uc001bay.3
            UCSC:uc001baz.3 CTD:5081 GeneCards:GC01P018957 HGNC:HGNC:8621
            MIM:167410 neXtProt:NX_P23759 PharmGKB:PA32961 InParanoid:P23759
            OMA:NPISASC OrthoDB:EOG4JM7PH PhylomeDB:P23759 GenomeRNAi:5081
            NextBio:19602 ArrayExpress:P23759 Bgee:P23759 CleanEx:HS_PAX7
            Genevestigator:P23759 GermOnline:ENSG00000009709 GO:GO:0014813
            Uniprot:P23759
        Length = 520

 Score = 337 (123.7 bits), Expect = 2.7e-30, P = 2.7e-30
 Identities = 68/94 (72%), Positives = 76/94 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR VATPDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIV 93
             K+ NP + SWE+RD+L+K    D S   S  G+V
Sbjct:   122 KRENPGMFSWEIRDRLLKDGHCDRSTVPS--GLV 153

 Score = 238 (88.8 bits), Expect = 2.6e-19, P = 2.6e-19
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query:    77 KVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKF 135
             K +RLD+ SD ESEP + LKRKQRRSRTTFT+ QLEELEK+F+R+HYPDIYTRE LA + 
Sbjct:   195 KGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 254

Query:   136 GMTETRVQ 143
              +TE RVQ
Sbjct:   255 KLTEARVQ 262


>ZFIN|ZDB-GENE-080917-54 [details] [associations]
            symbol:pax7b "paired box gene 7b" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-080917-54 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 KO:K09381 InterPro:IPR022106
            Pfam:PF12360 HOGENOM:HOG000230939 OrthoDB:EOG4JM7PH
            EMBL:CABZ01012260 EMBL:CABZ01012261 EMBL:CABZ01012262
            EMBL:CABZ01012263 EMBL:CABZ01012264 EMBL:FJ792831 IPI:IPI00862888
            RefSeq:NP_001139621.1 UniGene:Dr.134092 Ensembl:ENSDART00000129992
            GeneID:566533 KEGG:dre:566533 CTD:566533 NextBio:20888238
            Uniprot:C0M005
        Length = 510

 Score = 331 (121.6 bits), Expect = 1.1e-29, P = 1.1e-29
 Identities = 68/93 (73%), Positives = 73/93 (78%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-----VATPDVEKR 55
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKPR     VATPDVEKR
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQTQKQVATPDVEKR 121

Query:    56 IEEYKKTNPNITSWEVRDKLIKVSRLDDSDTES 88
             IEEYK+ NP + SWE+RDKL+K    D S   S
Sbjct:   122 IEEYKRENPGMFSWEIRDKLLKDGVCDRSTVPS 154

 Score = 237 (88.5 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 52/101 (51%), Positives = 65/101 (64%)

Query:    44 KPRVATPDVEKRIEEYKKTNPNITSWEVRDKLIKVSRLDD-SDTESEPGIVLKRKQRRSR 102
             + R    D E   ++   T    T   +   L    R+D+ SD ESEP + LKRKQRRSR
Sbjct:   168 RARFGKKDDEDDCDKKDDTGEKKTKHSIDGILGDKGRMDEVSDVESEPDLPLKRKQRRSR 227

Query:   103 TTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             TTFT+ QLEELEK+F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   228 TTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 268


>ZFIN|ZDB-GENE-080917-53 [details] [associations]
            symbol:pax3b "paired box gene 3b" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-080917-53 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
            EMBL:CABZ01009477 IPI:IPI00633604 Ensembl:ENSDART00000015843
            Uniprot:F1Q9S0
        Length = 480

 Score = 327 (120.2 bits), Expect = 1.8e-29, P = 1.8e-29
 Identities = 71/121 (58%), Positives = 84/121 (69%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVAT-PDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGG+K +  T PDVEKR+EEY
Sbjct:    66 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGTKSKQTTSPDVEKRVEEY 125

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQR-RSRTTFTSAQLEELEKSFQ 118
             K+ NP I SWE+RDKL+K    D ++  +   I   R  R RS T     + EE E+  +
Sbjct:   126 KRENPGIFSWEIRDKLLKEGICDRNNVPTVSSI--SRIMRGRSGTRADEEEEEEDEEDIE 183

Query:   119 R 119
             R
Sbjct:   184 R 184

 Score = 224 (83.9 bits), Expect = 7.1e-18, P = 7.1e-18
 Identities = 49/95 (51%), Positives = 65/95 (68%)

Query:    51 DVEKRIEEYKKTNPNITSWE--VRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSA 108
             D+E+R E  +  +    S E  + D+       + S+ ESEP + LKRKQRRSRTTFT+ 
Sbjct:   181 DIERR-EREENAHRGAHSIEGILADRFSASPSDEGSEVESEPDLPLKRKQRRSRTTFTAD 239

Query:   109 QLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             QLEELE++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   240 QLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 274


>UNIPROTKB|Q645N4 [details] [associations]
            symbol:pax3-a "Paired box protein Pax-3-A" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008543
            "fibroblast growth factor receptor signaling pathway" evidence=IGI]
            [GO:0014029 "neural crest formation" evidence=IGI;IMP] [GO:0014034
            "neural crest cell fate commitment" evidence=IGI;IMP] [GO:0016055
            "Wnt receptor signaling pathway" evidence=IGI] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048785 "hatching gland development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0008543
            GO:GO:0045893 GO:GO:0007399 GO:GO:0016055 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601 GO:GO:0014034
            KO:K09381 HOVERGEN:HBG009115 EMBL:AY757358 EMBL:AY725269
            EMBL:BC108573 RefSeq:NP_001088993.1 UniGene:Xl.49495
            ProteinModelPortal:Q645N4 SMR:Q645N4 GeneID:496376 KEGG:xla:496376
            CTD:496376 Xenbase:XB-GENE-482744 GO:GO:0048785 InterPro:IPR022106
            Pfam:PF12360 Uniprot:Q645N4
        Length = 484

 Score = 327 (120.2 bits), Expect = 2.0e-29, P = 2.0e-29
 Identities = 73/133 (54%), Positives = 90/133 (67%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             MA  GVRPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ V TP+VEK++EE+
Sbjct:    62 MAHHGVRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPEVEKKMEEF 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQLEELEKSF 117
             K+ NP + SWE+RDKL+K    D +   S   I  +L+ K  +          +E E+S 
Sbjct:   122 KRDNPGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGDEEDMELDRKEQEESE 181

Query:   118 QRS-HYPDIYTRE 129
             +R+ H  D   RE
Sbjct:   182 KRAKHSIDGILRE 194

 Score = 223 (83.6 bits), Expect = 9.4e-18, P = 9.4e-18
 Identities = 47/91 (51%), Positives = 63/91 (69%)

Query:    54 KRIEEYKKTNPNITSWEVRDKL-IKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEE 112
             K  EE +K   +     +R++  +     + SD +SEP + LKRKQRRSRTTFT+ QLEE
Sbjct:   175 KEQEESEKRAKHSIDGILRERAPVSPESEEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEE 234

Query:   113 LEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LE++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   235 LERAFERTHYPDIYTREELAQRAKLTEARVQ 265


>ZFIN|ZDB-GENE-980526-52 [details] [associations]
            symbol:pax3a "paired box gene 3a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0001755 "neural crest cell migration"
            evidence=IMP] [GO:0048066 "developmental pigmentation"
            evidence=IMP] [GO:0050936 "xanthophore differentiation"
            evidence=IMP] [GO:0048484 "enteric nervous system development"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-980526-52
            GO:GO:0005634 GO:GO:0001755 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048484 GO:GO:0050936
            HSSP:P06601 eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
            HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
            HOGENOM:HOG000230939 EMBL:BX085193 EMBL:AF014366 IPI:IPI00508576
            RefSeq:NP_571352.1 UniGene:Dr.75806 SMR:O57416 STRING:O57416
            Ensembl:ENSDART00000038828 GeneID:30532 KEGG:dre:30532 CTD:30532
            InParanoid:O57416 OMA:EENEPRT NextBio:20806915 Uniprot:O57416
        Length = 509

 Score = 324 (119.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 64/93 (68%), Positives = 74/93 (79%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVAT-PDVEKRIEEY 59
             MA  G+RPCVISRQLRVSHGCVSKIL RYQETGSIRPG IGGSKP+ +T PDVEK+IEEY
Sbjct:    62 MAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQSTTPDVEKKIEEY 121

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI 92
             K+ NP + SWE+RDKL+K    D ++  S   I
Sbjct:   122 KRENPGMFSWEIRDKLLKDGICDRNNVPSVSSI 154

 Score = 237 (88.5 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 53/95 (55%), Positives = 69/95 (72%)

Query:    51 DVEKR-IEEYKKTNPNITSWEVRDKLIKVSRLDD-SDTESEPGIVLKRKQRRSRTTFTSA 108
             +VEKR IEE ++   +     + D+    S  D+ SD +SEPG+ LKRKQRRSRTTFT+ 
Sbjct:   174 EVEKREIEENERRAKHSIDGILGDRS---SHSDEGSDVDSEPGLPLKRKQRRSRTTFTAE 230

Query:   109 QLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             QLEELE++F+R+HYPDIYTRE LA +  +TE RVQ
Sbjct:   231 QLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 265


>UNIPROTKB|F1MWQ4 [details] [associations]
            symbol:PAX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051573 "negative
            regulation of histone H3-K9 methylation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0051573 GeneTree:ENSGT00680000099910
            EMBL:DAAA02023162 IPI:IPI00705343 Ensembl:ENSBTAT00000016584
            OMA:FTYSEIS Uniprot:F1MWQ4
        Length = 261

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    45 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 104

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   105 RQNPTMFAWEIRDRLL-AERVCDNDT 129


>UNIPROTKB|E2RIS8 [details] [associations]
            symbol:PAX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 CTD:5079 KO:K09383 OMA:IXIQESP
            EMBL:AAEX03007966 EMBL:AAEX03007965 RefSeq:XP_854841.2
            ProteinModelPortal:E2RIS8 Ensembl:ENSCAFT00000003691 GeneID:612021
            KEGG:cfa:612021 NextBio:20897555 Uniprot:E2RIS8
        Length = 391

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>UNIPROTKB|J9P1P0 [details] [associations]
            symbol:PAX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099910
            EMBL:AAEX03007966 EMBL:AAEX03007965 Ensembl:ENSCAFT00000048498
            Uniprot:J9P1P0
        Length = 288

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>UNIPROTKB|C0KTF6 [details] [associations]
            symbol:PAX5 "Paired box protein Pax-5" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 HOGENOM:HOG000230939 EMBL:AL161781
            EMBL:AL450267 UniGene:Hs.654464 HGNC:HGNC:8619 ChiTaRS:PAX5
            EMBL:FJ626421 IPI:IPI00929236 SMR:C0KTF6 STRING:C0KTF6
            Ensembl:ENST00000377847 UCSC:uc011lpw.1 Uniprot:C0KTF6
        Length = 328

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>UNIPROTKB|C0KTG0 [details] [associations]
            symbol:PAX5 "B cell specific activator protein variant A
            delta 7 insert 6/7" species:9606 "Homo sapiens" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0007275
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            HOGENOM:HOG000230939 EMBL:AL161781 EMBL:AL450267 UniGene:Hs.654464
            HGNC:HGNC:8619 ChiTaRS:PAX5 EMBL:FJ626425 IPI:IPI00977401
            SMR:C0KTG0 STRING:C0KTG0 Ensembl:ENST00000523493 Uniprot:C0KTG0
        Length = 307

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>UNIPROTKB|E7EQT0 [details] [associations]
            symbol:PAX5 "Paired box protein Pax-5" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 EMBL:AL161781 EMBL:AL450267
            IPI:IPI00437169 HGNC:HGNC:8619 ChiTaRS:PAX5
            ProteinModelPortal:E7EQT0 SMR:E7EQT0 Ensembl:ENST00000523241
            UCSC:uc010mlr.1 ArrayExpress:E7EQT0 Bgee:E7EQT0 Uniprot:E7EQT0
        Length = 324

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>UNIPROTKB|E7ERW5 [details] [associations]
            symbol:PAX5 "Paired box protein Pax-5" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 EMBL:AL161781 EMBL:AL450267
            IPI:IPI00437168 HGNC:HGNC:8619 ChiTaRS:PAX5
            ProteinModelPortal:E7ERW5 SMR:E7ERW5 Ensembl:ENST00000520154
            UCSC:uc010mls.1 ArrayExpress:E7ERW5 Bgee:E7ERW5 Uniprot:E7ERW5
        Length = 295

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>UNIPROTKB|Q02548 [details] [associations]
            symbol:PAX5 "Paired box protein Pax-5" species:9606 "Homo
            sapiens" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0051573
            "negative regulation of histone H3-K9 methylation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006366 "transcription from
            RNA polymerase II promoter" evidence=TAS] [GO:0006959 "humoral
            immune response" evidence=TAS] [GO:0007275 "multicellular
            organismal development" evidence=TAS] [GO:0009887 "organ
            morphogenesis" evidence=TAS] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0007283 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0009887 GO:GO:0006366 EMBL:CH471071 GO:GO:0006959
            GO:GO:0051573 PDB:1K78 PDB:1MDM PDBsum:1K78 PDBsum:1MDM
            EMBL:DQ841178 EMBL:DQ845346 eggNOG:NOG326044 HOVERGEN:HBG009115
            HOGENOM:HOG000230938 InterPro:IPR022130 Pfam:PF12403 EMBL:M96944
            EMBL:AY463952 EMBL:AY463953 EMBL:AY463954 EMBL:AY463955
            EMBL:AY463956 EMBL:AY463957 EMBL:EF064717 EMBL:AL161781
            EMBL:AL450267 EMBL:DQ845345 EMBL:AF080573 IPI:IPI00026209
            IPI:IPI00437168 IPI:IPI00437169 IPI:IPI00437171 IPI:IPI00437172
            IPI:IPI00973553 PIR:A44063 RefSeq:NP_057953.1 UniGene:Hs.654464
            ProteinModelPortal:Q02548 SMR:Q02548 IntAct:Q02548 STRING:Q02548
            PhosphoSite:Q02548 DMDM:417449 PaxDb:Q02548 PRIDE:Q02548 DNASU:5079
            Ensembl:ENST00000358127 Ensembl:ENST00000377840
            Ensembl:ENST00000377852 Ensembl:ENST00000377853 GeneID:5079
            KEGG:hsa:5079 UCSC:uc003zzo.1 CTD:5079 GeneCards:GC09M036828
            HGNC:HGNC:8619 HPA:CAB026269 HPA:CAB026869 MIM:167414
            neXtProt:NX_Q02548 PharmGKB:PA32959 InParanoid:Q02548 KO:K09383
            OMA:IXIQESP OrthoDB:EOG4DZ1VJ ChiTaRS:PAX5 EvolutionaryTrace:Q02548
            GenomeRNAi:5079 NextBio:19592 ArrayExpress:Q02548 Bgee:Q02548
            CleanEx:HS_PAX5 Genevestigator:Q02548 GermOnline:ENSG00000196092
            Uniprot:Q02548
        Length = 391

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>UNIPROTKB|F1ST83 [details] [associations]
            symbol:PAX5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0051573 "negative
            regulation of histone H3-K9 methylation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0051573 GeneTree:ENSGT00680000099910
            OMA:FTYSEIS EMBL:AEMK01037413 EMBL:AEMK01182707 EMBL:CU405707
            EMBL:CU570841 EMBL:CU928778 Ensembl:ENSSSCT00000005884
            Uniprot:F1ST83
        Length = 260

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>MGI|MGI:97489 [details] [associations]
            symbol:Pax5 "paired box gene 5" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0003677 "DNA binding"
            evidence=IMP;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005667 "transcription factor complex" evidence=TAS]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0009887
            "organ morphogenesis" evidence=TAS] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0035914 "skeletal muscle cell
            differentiation" evidence=IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IGI] [GO:0051573 "negative
            regulation of histone H3-K9 methylation" evidence=IMP]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 MGI:MGI:97489
            GO:GO:0007399 GO:GO:0003677 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0009887
            GO:GO:0035914 GO:GO:0051573 eggNOG:NOG326044 HOVERGEN:HBG009115
            HOGENOM:HOG000230938 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 CTD:5079 KO:K09383 OMA:IXIQESP
            OrthoDB:EOG4DZ1VJ EMBL:M97013 IPI:IPI00130388 PIR:B41061
            RefSeq:NP_032808.1 UniGene:Mm.439659 ProteinModelPortal:Q02650
            SMR:Q02650 IntAct:Q02650 MINT:MINT-246854 STRING:Q02650
            PhosphoSite:Q02650 PRIDE:Q02650 Ensembl:ENSMUST00000014174
            GeneID:18507 KEGG:mmu:18507 InParanoid:Q02650 NextBio:294232
            Bgee:Q02650 CleanEx:MM_PAX5 Genevestigator:Q02650
            GermOnline:ENSMUSG00000014030 Uniprot:Q02650
        Length = 391

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AERVCDNDT 128


>UNIPROTKB|Q9YH95 [details] [associations]
            symbol:pax5 "Paired box protein Pax-5" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            HOVERGEN:HBG009115 InterPro:IPR022130 Pfam:PF12403 HSSP:Q02548
            CTD:5079 KO:K09383 EMBL:AJ010503 RefSeq:NP_001079237.1
            UniGene:Xl.108 ProteinModelPortal:Q9YH95 SMR:Q9YH95 GeneID:378499
            KEGG:xla:378499 Xenbase:XB-GENE-865318 Uniprot:Q9YH95
        Length = 388

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 57/86 (66%), Positives = 70/86 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I +YK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+   R+ D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AERVCDNDT 127


>ZFIN|ZDB-GENE-001030-3 [details] [associations]
            symbol:pax8 "paired box gene 8" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007422 "peripheral nervous
            system development" evidence=IGI] [GO:0043049 "otic placode
            formation" evidence=IGI;IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 ZFIN:ZDB-GENE-001030-3 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0043049 eggNOG:NOG326044
            HOVERGEN:HBG009115 HOGENOM:HOG000230938 InterPro:IPR022130
            Pfam:PF12403 HSSP:Q02548 EMBL:AF072549 IPI:IPI00500712
            UniGene:Dr.8177 ProteinModelPortal:O93372 STRING:O93372
            InParanoid:O93372 ArrayExpress:O93372 Uniprot:O93372
        Length = 429

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 58/86 (67%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             MA  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V ++I EYK
Sbjct:    17 MAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYK 76

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D DT
Sbjct:    77 RQNPTMFAWEIRDRLL-AEGVCDGDT 101


>UNIPROTKB|F1SML3 [details] [associations]
            symbol:PAX4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045597 "positive
            regulation of cell differentiation" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045597 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
            GeneTree:ENSGT00680000099553 EMBL:CU861978
            Ensembl:ENSSSCT00000018063 Uniprot:F1SML3
        Length = 336

 Score = 225 (84.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
 Identities = 50/112 (44%), Positives = 67/112 (59%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G+RPC ISR+L+VS+GCVSKIL RY  TG++ P  IGGSKPR+ATP V  RI + K
Sbjct:    33 LAVSGMRPCDISRRLKVSNGCVSKILGRYYRTGALEPKGIGGSKPRLATPPVVARIAQLK 92

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQL 110
                P + +WE++ +L          T S   I  VL+  Q   R  +T   L
Sbjct:    93 GECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLRGLQEDQRLPWTQLNL 144

 Score = 90 (36.7 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+  Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   172 RNRTIFSPGQAEALEKEFQRGQYPDSVARGKLAAATSLPEDTVR 215


>UNIPROTKB|I3LEF5 [details] [associations]
            symbol:PAX4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00680000099553
            EMBL:CU861978 Ensembl:ENSSSCT00000027414 OMA:FAWEIRH Uniprot:I3LEF5
        Length = 273

 Score = 225 (84.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
 Identities = 50/112 (44%), Positives = 67/112 (59%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G+RPC ISR+L+VS+GCVSKIL RY  TG++ P  IGGSKPR+ATP V  RI + K
Sbjct:    51 LAVSGMRPCDISRRLKVSNGCVSKILGRYYRTGALEPKGIGGSKPRLATPPVVARIAQLK 110

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQL 110
                P + +WE++ +L          T S   I  VL+  Q   R  +T   L
Sbjct:   111 GECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLRGLQEDQRLPWTQLNL 162

 Score = 90 (36.7 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+  Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   226 RNRTIFSPGQAEALEKEFQRGQYPDSVARGKLAAATSLPEDTVR 269


>UNIPROTKB|F1NEQ7 [details] [associations]
            symbol:PAX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 EMBL:AADN02027800 EMBL:AADN02027801
            EMBL:AADN02027802 EMBL:AADN02027803 EMBL:AADN02027804
            IPI:IPI00821502 Ensembl:ENSGALT00000009124 ArrayExpress:F1NEQ7
            Uniprot:F1NEQ7
        Length = 379

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    29 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 88

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:    89 RQNPTMFAWEIRDRLL-AEGICDNDT 113


>UNIPROTKB|F1NWQ9 [details] [associations]
            symbol:PAX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 EMBL:AADN02027800 EMBL:AADN02027801
            EMBL:AADN02027802 EMBL:AADN02027803 EMBL:AADN02027804
            IPI:IPI00594911 Ensembl:ENSGALT00000040175 ArrayExpress:F1NWQ9
            Uniprot:F1NWQ9
        Length = 392

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    42 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 101

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   102 RQNPTMFAWEIRDRLL-AEGICDNDT 126


>UNIPROTKB|F1MNR2 [details] [associations]
            symbol:PAX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000597 "positive
            regulation of optic nerve formation" evidence=IEA] [GO:2000594
            "positive regulation of metanephric DCT cell differentiation"
            evidence=IEA] [GO:2000378 "negative regulation of reactive oxygen
            species metabolic process" evidence=IEA] [GO:1900218 "negative
            regulation of apoptotic process involved in metanephric nephron
            tubule development" evidence=IEA] [GO:1900215 "negative regulation
            of apoptotic process involved in metanephric collecting duct
            development" evidence=IEA] [GO:0090190 "positive regulation of
            branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:0090103 "cochlea morphogenesis" evidence=IEA] [GO:0072593
            "reactive oxygen species metabolic process" evidence=IEA]
            [GO:0072307 "regulation of metanephric nephron tubule epithelial
            cell differentiation" evidence=IEA] [GO:0072305 "negative
            regulation of mesenchymal cell apoptotic process involved in
            metanephric nephron morphogenesis" evidence=IEA] [GO:0072300
            "positive regulation of metanephric glomerulus development"
            evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
            evidence=IEA] [GO:0072221 "metanephric distal convoluted tubule
            development" evidence=IEA] [GO:0072205 "metanephric collecting duct
            development" evidence=IEA] [GO:0072197 "ureter morphogenesis"
            evidence=IEA] [GO:0072179 "nephric duct formation" evidence=IEA]
            [GO:0072177 "mesonephric duct development" evidence=IEA]
            [GO:0072172 "mesonephric tubule formation" evidence=IEA]
            [GO:0072162 "metanephric mesenchymal cell differentiation"
            evidence=IEA] [GO:0072108 "positive regulation of mesenchymal to
            epithelial transition involved in metanephros morphogenesis"
            evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
            evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
            evidence=IEA] [GO:0071260 "cellular response to mechanical
            stimulus" evidence=IEA] [GO:0070742 "C2H2 zinc finger domain
            binding" evidence=IEA] [GO:0070301 "cellular response to hydrogen
            peroxide" evidence=IEA] [GO:0061360 "optic chiasma development"
            evidence=IEA] [GO:0061205 "paramesonephric duct development"
            evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
            proliferation" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048854 "brain morphogenesis"
            evidence=IEA] [GO:0045918 "negative regulation of cytolysis"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043491 "protein kinase B
            signaling cascade" evidence=IEA] [GO:0043234 "protein complex"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0039003 "pronephric field specification" evidence=IEA]
            [GO:0035799 "ureter maturation" evidence=IEA] [GO:0035566
            "regulation of metanephros size" evidence=IEA] [GO:0034451
            "centriolar satellite" evidence=IEA] [GO:0032993 "protein-DNA
            complex" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0021650 "vestibulocochlear nerve formation"
            evidence=IEA] [GO:0021633 "optic nerve structural organization"
            evidence=IEA] [GO:0016175 "superoxide-generating NADPH oxidase
            activity" evidence=IEA] [GO:0010001 "glial cell differentiation"
            evidence=IEA] [GO:0007501 "mesodermal cell fate specification"
            evidence=IEA] [GO:0003406 "retinal pigment epithelium development"
            evidence=IEA] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=IEA] [GO:0002072
            "optic cup morphogenesis involved in camera-type eye development"
            evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
            [GO:0001709 "cell fate determination" evidence=IEA] [GO:0001658
            "branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:0000987 "core promoter proximal region sequence-specific DNA
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0005634
            GO:GO:0043066 GO:GO:0043154 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0043010 GO:GO:0000987 GO:GO:0035566 GO:GO:0034451
            GO:GO:0001658 GO:GO:2000378 GO:GO:0001709 GO:GO:0050679
            GO:GO:0060231 GO:GO:0001823 GO:GO:0045918 GO:GO:0090103
            GeneTree:ENSGT00680000099910 KO:K15608 InterPro:IPR022130
            Pfam:PF12403 CTD:5076 OMA:TYPVVTX GO:GO:0072207 EMBL:DAAA02058976
            EMBL:DAAA02058977 EMBL:DAAA02058978 EMBL:DAAA02058979
            IPI:IPI01004006 RefSeq:XP_002698481.1 ProteinModelPortal:F1MNR2
            SMR:F1MNR2 PRIDE:F1MNR2 Ensembl:ENSBTAT00000061634 GeneID:100297382
            KEGG:bta:100297382 Uniprot:F1MNR2
        Length = 417

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AEGICDNDT 128


>UNIPROTKB|F1PDS6 [details] [associations]
            symbol:PAX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 EMBL:AAEX03015472
            Ensembl:ENSCAFT00000015418 Uniprot:F1PDS6
        Length = 346

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    48 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 107

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   108 RQNPTMFAWEIRDRLL-AEGICDNDT 132


>UNIPROTKB|F1PJT0 [details] [associations]
            symbol:PAX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 OMA:TYPVVTX EMBL:AAEX03015472
            Ensembl:ENSCAFT00000003701 Uniprot:F1PJT0
        Length = 418

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AEGICDNDT 127


>UNIPROTKB|G3V5U4 [details] [associations]
            symbol:PAX2 "Paired box protein Pax-2" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 InterPro:IPR022130 Pfam:PF12403
            EMBL:AL138762 EMBL:AL589862 HGNC:HGNC:8616
            ProteinModelPortal:G3V5U4 SMR:G3V5U4 Ensembl:ENST00000556085
            ArrayExpress:G3V5U4 Bgee:G3V5U4 Uniprot:G3V5U4
        Length = 393

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AEGICDNDT 127


>UNIPROTKB|Q02962 [details] [associations]
            symbol:PAX2 "Paired box protein Pax-2" species:9606 "Homo
            sapiens" [GO:0061205 "paramesonephric duct development"
            evidence=IEA] [GO:0070742 "C2H2 zinc finger domain binding"
            evidence=IEA] [GO:0071260 "cellular response to mechanical
            stimulus" evidence=IEA] [GO:0071364 "cellular response to epidermal
            growth factor stimulus" evidence=IEA] [GO:0072172 "mesonephric
            tubule formation" evidence=IEA] [GO:0072177 "mesonephric duct
            development" evidence=IEA] [GO:0072197 "ureter morphogenesis"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0005764
            "lysosome" evidence=IEA] [GO:0007568 "aging" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0031667
            "response to nutrient levels" evidence=IEA] [GO:0003337
            "mesenchymal to epithelial transition involved in metanephros
            morphogenesis" evidence=ISS] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IDA] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IDA] [GO:0072162
            "metanephric mesenchymal cell differentiation" evidence=ISS]
            [GO:0000987 "core promoter proximal region sequence-specific DNA
            binding" evidence=IDA] [GO:0045918 "negative regulation of
            cytolysis" evidence=IMP] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IMP;IDA] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISS;IDA]
            [GO:2000597 "positive regulation of optic nerve formation"
            evidence=ISS] [GO:0072075 "metanephric mesenchyme development"
            evidence=ISS] [GO:0072221 "metanephric distal convoluted tubule
            development" evidence=ISS] [GO:0072289 "metanephric nephron tubule
            formation" evidence=ISS] [GO:0072305 "negative regulation of
            mesenchymal cell apoptotic process involved in metanephric nephron
            morphogenesis" evidence=ISS] [GO:0072307 "regulation of metanephric
            nephron tubule epithelial cell differentiation" evidence=ISS]
            [GO:0001655 "urogenital system development" evidence=ISS]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IEP;ISS] [GO:0001843 "neural tube closure" evidence=ISS]
            [GO:0002072 "optic cup morphogenesis involved in camera-type eye
            development" evidence=ISS] [GO:0003406 "retinal pigment epithelium
            development" evidence=ISS] [GO:0010001 "glial cell differentiation"
            evidence=ISS] [GO:0039003 "pronephric field specification"
            evidence=ISS] [GO:0072108 "positive regulation of mesenchymal to
            epithelial transition involved in metanephros morphogenesis"
            evidence=ISS] [GO:0021554 "optic nerve development" evidence=ISS]
            [GO:0021631 "optic nerve morphogenesis" evidence=ISS] [GO:0021633
            "optic nerve structural organization" evidence=ISS] [GO:0021650
            "vestibulocochlear nerve formation" evidence=ISS] [GO:0042472
            "inner ear morphogenesis" evidence=ISS] [GO:0043010 "camera-type
            eye development" evidence=ISS] [GO:0043069 "negative regulation of
            programmed cell death" evidence=ISS] [GO:0048854 "brain
            morphogenesis" evidence=ISS] [GO:0060231 "mesenchymal to epithelial
            transition" evidence=ISS] [GO:0061360 "optic chiasma development"
            evidence=ISS] [GO:0090102 "cochlea development" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0035566 "regulation of
            metanephros size" evidence=IMP] [GO:0071300 "cellular response to
            retinoic acid" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0035799 "ureter maturation" evidence=ISS] [GO:0050679 "positive
            regulation of epithelial cell proliferation" evidence=IDA]
            [GO:2000378 "negative regulation of reactive oxygen species
            metabolic process" evidence=IDA] [GO:0007501 "mesodermal cell fate
            specification" evidence=ISS] [GO:0043491 "protein kinase B
            signaling cascade" evidence=ISS] [GO:0072593 "reactive oxygen
            species metabolic process" evidence=ISS] [GO:0072207 "metanephric
            epithelium development" evidence=IEP] [GO:0016175
            "superoxide-generating NADPH oxidase activity" evidence=ISS]
            [GO:0032993 "protein-DNA complex" evidence=ISS] [GO:0043234
            "protein complex" evidence=ISS] [GO:0070301 "cellular response to
            hydrogen peroxide" evidence=ISS] [GO:0072300 "positive regulation
            of metanephric glomerulus development" evidence=ISS] [GO:0006351
            "transcription, DNA-dependent" evidence=ISS] [GO:2000594 "positive
            regulation of metanephric DCT cell differentiation" evidence=ISS]
            [GO:0001823 "mesonephros development" evidence=ISS] [GO:0048793
            "pronephros development" evidence=ISS] [GO:0072179 "nephric duct
            formation" evidence=ISS] [GO:0090103 "cochlea morphogenesis"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:1900212 "negative regulation of
            mesenchymal cell apoptotic process involved in metanephros
            development" evidence=ISS] [GO:1900215 "negative regulation of
            apoptotic process involved in metanephric collecting duct
            development" evidence=ISS] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0048863 "stem cell differentiation" evidence=ISS]
            [GO:0072205 "metanephric collecting duct development" evidence=ISS]
            [GO:0001709 "cell fate determination" evidence=ISS] [GO:0072189
            "ureter development" evidence=ISS] [GO:0071333 "cellular response
            to glucose stimulus" evidence=ISS] [GO:0090190 "positive regulation
            of branching involved in ureteric bud morphogenesis" evidence=ISS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0007409 "axonogenesis" evidence=TAS] [GO:0007601
            "visual perception" evidence=TAS] [GO:0005815 "microtubule
            organizing center" evidence=IDA] [GO:0034451 "centriolar satellite"
            evidence=IDA] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            GO:GO:0005634 GO:GO:0045892 GO:GO:0043154 GO:GO:0043234
            GO:GO:0071333 GO:GO:0070301 EMBL:CH471066 GO:GO:0007601
            GO:GO:0071300 GO:GO:0045944 GO:GO:0048863 Gene3D:1.10.10.10
            InterPro:IPR011991 SUPFAM:SSF46689 GO:GO:0007501 GO:GO:0000122
            GO:GO:0006366 GO:GO:0000987 GO:GO:0007409 GO:GO:0001843
            GO:GO:0072593 GO:GO:0090190 GO:GO:0072300 GO:GO:0035566
            GO:GO:0016175 GO:GO:0043491 GO:GO:0002072 GO:GO:0035799
            GO:GO:0034451 GO:GO:0001658 GO:GO:2000378 GO:GO:0072205
            GO:GO:0001709 GO:GO:0050679 GO:GO:0010001 GO:GO:0048854
            GO:GO:0032993 GO:GO:0003337 GO:GO:0001823 GO:GO:0072221
            GO:GO:0045918 GO:GO:0090103 GO:GO:0072179 GO:GO:0072108
            eggNOG:NOG326044 GO:GO:0003406 GO:GO:0021633 GO:GO:0039003
            GO:GO:0072307 GO:GO:0072162 HOVERGEN:HBG009115 HOGENOM:HOG000230938
            KO:K15608 InterPro:IPR022130 Pfam:PF12403 EMBL:M89470 EMBL:L25597
            EMBL:U45255 EMBL:U45245 EMBL:U45246 EMBL:U45247 EMBL:U45248
            EMBL:U45249 EMBL:U45250 EMBL:U45251 EMBL:U45253 EMBL:U45254
            EMBL:AL138762 EMBL:AL589862 EMBL:L09747 EMBL:L09748 EMBL:L09746
            IPI:IPI00179609 IPI:IPI00220545 IPI:IPI00375134 IPI:IPI00395548
            PIR:A49008 RefSeq:NP_000269.2 RefSeq:NP_003978.2 RefSeq:NP_003979.2
            RefSeq:NP_003980.2 RefSeq:NP_003981.2 UniGene:Hs.155644
            ProteinModelPortal:Q02962 SMR:Q02962 IntAct:Q02962 STRING:Q02962
            PhosphoSite:Q02962 DMDM:223590261 PaxDb:Q02962 PRIDE:Q02962
            DNASU:5076 Ensembl:ENST00000355243 Ensembl:ENST00000361791
            Ensembl:ENST00000370296 Ensembl:ENST00000428433 GeneID:5076
            KEGG:hsa:5076 UCSC:uc001krk.4 UCSC:uc001krl.4 UCSC:uc001krm.4
            UCSC:uc001krn.4 CTD:5076 GeneCards:GC10P102495 HGNC:HGNC:8616
            HPA:CAB013024 MIM:120330 MIM:167409 neXtProt:NX_Q02962
            Orphanet:1475 PharmGKB:PA32956 OMA:TYPVVTX OrthoDB:EOG49S66H
            PhylomeDB:Q02962 GenomeRNAi:5076 NextBio:19560 ArrayExpress:Q02962
            Bgee:Q02962 CleanEx:HS_PAX2 Genevestigator:Q02962
            GermOnline:ENSG00000075891 GO:GO:0072289 GO:GO:1900215
            GO:GO:1900218 GO:GO:0072305 GO:GO:0061360 GO:GO:2000594
            GO:GO:2000597 GO:GO:0021650 Uniprot:Q02962
        Length = 417

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AEGICDNDT 128


>UNIPROTKB|Q5SZP1 [details] [associations]
            symbol:PAX2 "Paired box protein Pax-2" species:9606 "Homo
            sapiens" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000987 "core promoter
            proximal region sequence-specific DNA binding" evidence=IEA]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IEA] [GO:0001709 "cell fate determination" evidence=IEA]
            [GO:0001843 "neural tube closure" evidence=IEA] [GO:0002072 "optic
            cup morphogenesis involved in camera-type eye development"
            evidence=IEA] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=IEA] [GO:0003406
            "retinal pigment epithelium development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
            [GO:0007501 "mesodermal cell fate specification" evidence=IEA]
            [GO:0007568 "aging" evidence=IEA] [GO:0008284 "positive regulation
            of cell proliferation" evidence=IEA] [GO:0010001 "glial cell
            differentiation" evidence=IEA] [GO:0016175 "superoxide-generating
            NADPH oxidase activity" evidence=IEA] [GO:0021633 "optic nerve
            structural organization" evidence=IEA] [GO:0021650
            "vestibulocochlear nerve formation" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0031667 "response to
            nutrient levels" evidence=IEA] [GO:0032993 "protein-DNA complex"
            evidence=IEA] [GO:0035566 "regulation of metanephros size"
            evidence=IEA] [GO:0035799 "ureter maturation" evidence=IEA]
            [GO:0039003 "pronephric field specification" evidence=IEA]
            [GO:0043234 "protein complex" evidence=IEA] [GO:0043491 "protein
            kinase B signaling cascade" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0048854 "brain morphogenesis" evidence=IEA] [GO:0048863 "stem
            cell differentiation" evidence=IEA] [GO:0061205 "paramesonephric
            duct development" evidence=IEA] [GO:0061360 "optic chiasma
            development" evidence=IEA] [GO:0070301 "cellular response to
            hydrogen peroxide" evidence=IEA] [GO:0070742 "C2H2 zinc finger
            domain binding" evidence=IEA] [GO:0071260 "cellular response to
            mechanical stimulus" evidence=IEA] [GO:0071300 "cellular response
            to retinoic acid" evidence=IEA] [GO:0071333 "cellular response to
            glucose stimulus" evidence=IEA] [GO:0071364 "cellular response to
            epidermal growth factor stimulus" evidence=IEA] [GO:0072108
            "positive regulation of mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=IEA] [GO:0072162
            "metanephric mesenchymal cell differentiation" evidence=IEA]
            [GO:0072172 "mesonephric tubule formation" evidence=IEA]
            [GO:0072177 "mesonephric duct development" evidence=IEA]
            [GO:0072179 "nephric duct formation" evidence=IEA] [GO:0072197
            "ureter morphogenesis" evidence=IEA] [GO:0072205 "metanephric
            collecting duct development" evidence=IEA] [GO:0072221 "metanephric
            distal convoluted tubule development" evidence=IEA] [GO:0072289
            "metanephric nephron tubule formation" evidence=IEA] [GO:0072300
            "positive regulation of metanephric glomerulus development"
            evidence=IEA] [GO:0072305 "negative regulation of mesenchymal cell
            apoptotic process involved in metanephric nephron morphogenesis"
            evidence=IEA] [GO:0072307 "regulation of metanephric nephron tubule
            epithelial cell differentiation" evidence=IEA] [GO:0072593
            "reactive oxygen species metabolic process" evidence=IEA]
            [GO:0090103 "cochlea morphogenesis" evidence=IEA] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=IEA] [GO:1900215 "negative regulation of
            apoptotic process involved in metanephric collecting duct
            development" evidence=IEA] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=IEA] [GO:2000594 "positive regulation of
            metanephric DCT cell differentiation" evidence=IEA] [GO:2000597
            "positive regulation of optic nerve formation" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0005634
            GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010
            GO:GO:0043069 GO:GO:0001658 GO:GO:0001656 GO:GO:0001709
            GO:GO:0060231 GO:GO:0001823 GO:GO:0090103 HOVERGEN:HBG009115
            HOGENOM:HOG000230938 EMBL:AL138762 EMBL:AL589862 IPI:IPI00395548
            UniGene:Hs.155644 HGNC:HGNC:8616 SMR:Q5SZP1 Ensembl:ENST00000427256
            Uniprot:Q5SZP1
        Length = 214

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AEGICDNDT 128


>UNIPROTKB|F1S8U8 [details] [associations]
            symbol:PAX2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000597 "positive
            regulation of optic nerve formation" evidence=IEA] [GO:2000594
            "positive regulation of metanephric DCT cell differentiation"
            evidence=IEA] [GO:2000378 "negative regulation of reactive oxygen
            species metabolic process" evidence=IEA] [GO:1900218 "negative
            regulation of apoptotic process involved in metanephric nephron
            tubule development" evidence=IEA] [GO:1900215 "negative regulation
            of apoptotic process involved in metanephric collecting duct
            development" evidence=IEA] [GO:0090190 "positive regulation of
            branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:0090103 "cochlea morphogenesis" evidence=IEA] [GO:0072593
            "reactive oxygen species metabolic process" evidence=IEA]
            [GO:0072307 "regulation of metanephric nephron tubule epithelial
            cell differentiation" evidence=IEA] [GO:0072305 "negative
            regulation of mesenchymal cell apoptotic process involved in
            metanephric nephron morphogenesis" evidence=IEA] [GO:0072300
            "positive regulation of metanephric glomerulus development"
            evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
            evidence=IEA] [GO:0072221 "metanephric distal convoluted tubule
            development" evidence=IEA] [GO:0072205 "metanephric collecting duct
            development" evidence=IEA] [GO:0072197 "ureter morphogenesis"
            evidence=IEA] [GO:0072179 "nephric duct formation" evidence=IEA]
            [GO:0072177 "mesonephric duct development" evidence=IEA]
            [GO:0072172 "mesonephric tubule formation" evidence=IEA]
            [GO:0072162 "metanephric mesenchymal cell differentiation"
            evidence=IEA] [GO:0072108 "positive regulation of mesenchymal to
            epithelial transition involved in metanephros morphogenesis"
            evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
            evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
            evidence=IEA] [GO:0071260 "cellular response to mechanical
            stimulus" evidence=IEA] [GO:0070742 "C2H2 zinc finger domain
            binding" evidence=IEA] [GO:0070301 "cellular response to hydrogen
            peroxide" evidence=IEA] [GO:0061360 "optic chiasma development"
            evidence=IEA] [GO:0061205 "paramesonephric duct development"
            evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
            proliferation" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048854 "brain morphogenesis"
            evidence=IEA] [GO:0045918 "negative regulation of cytolysis"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043491 "protein kinase B
            signaling cascade" evidence=IEA] [GO:0043234 "protein complex"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0039003 "pronephric field specification" evidence=IEA]
            [GO:0035799 "ureter maturation" evidence=IEA] [GO:0035566
            "regulation of metanephros size" evidence=IEA] [GO:0034451
            "centriolar satellite" evidence=IEA] [GO:0032993 "protein-DNA
            complex" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0021650 "vestibulocochlear nerve formation"
            evidence=IEA] [GO:0021633 "optic nerve structural organization"
            evidence=IEA] [GO:0016175 "superoxide-generating NADPH oxidase
            activity" evidence=IEA] [GO:0010001 "glial cell differentiation"
            evidence=IEA] [GO:0007501 "mesodermal cell fate specification"
            evidence=IEA] [GO:0003406 "retinal pigment epithelium development"
            evidence=IEA] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=IEA] [GO:0002072
            "optic cup morphogenesis involved in camera-type eye development"
            evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
            [GO:0001709 "cell fate determination" evidence=IEA] [GO:0001658
            "branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:0000987 "core promoter proximal region sequence-specific DNA
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0005634
            GO:GO:0043066 GO:GO:0043154 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0043010 GO:GO:0000987 GO:GO:0035566 GO:GO:0034451
            GO:GO:0001658 GO:GO:2000378 GO:GO:0001709 GO:GO:0050679
            GO:GO:0060231 GO:GO:0001823 GO:GO:0045918 GO:GO:0090103
            GeneTree:ENSGT00680000099910 KO:K15608 InterPro:IPR022130
            Pfam:PF12403 CTD:5076 OMA:TYPVVTX GO:GO:0072207 EMBL:CT737251
            RefSeq:XP_003359377.1 ProteinModelPortal:F1S8U8 SMR:F1S8U8
            PRIDE:F1S8U8 Ensembl:ENSSSCT00000011548 GeneID:100515585
            KEGG:ssc:100515585 Uniprot:F1S8U8
        Length = 417

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 103

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   104 RQNPTMFAWEIRDRLL-AEGICDNDT 128


>UNIPROTKB|D5GSQ9 [details] [associations]
            symbol:pax2 "Paired box 2" species:9940 "Ovis aries"
            [GO:0000987 "core promoter proximal region sequence-specific DNA
            binding" evidence=ISS] [GO:0001655 "urogenital system development"
            evidence=ISS] [GO:0001658 "branching involved in ureteric bud
            morphogenesis" evidence=ISS] [GO:0001709 "cell fate determination"
            evidence=ISS] [GO:0001823 "mesonephros development" evidence=ISS]
            [GO:0001843 "neural tube closure" evidence=ISS] [GO:0002072 "optic
            cup morphogenesis involved in camera-type eye development"
            evidence=ISS] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=ISS] [GO:0003406
            "retinal pigment epithelium development" evidence=ISS] [GO:0003677
            "DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005815 "microtubule organizing center" evidence=ISS]
            [GO:0006351 "transcription, DNA-dependent" evidence=ISS]
            [GO:0007501 "mesodermal cell fate specification" evidence=ISS]
            [GO:0010001 "glial cell differentiation" evidence=ISS] [GO:0016175
            "superoxide-generating NADPH oxidase activity" evidence=ISS]
            [GO:0021554 "optic nerve development" evidence=ISS] [GO:0021631
            "optic nerve morphogenesis" evidence=ISS] [GO:0021633 "optic nerve
            structural organization" evidence=ISS] [GO:0021650
            "vestibulocochlear nerve formation" evidence=ISS] [GO:0032993
            "protein-DNA complex" evidence=ISS] [GO:0034451 "centriolar
            satellite" evidence=ISS] [GO:0035566 "regulation of metanephros
            size" evidence=ISS] [GO:0035799 "ureter maturation" evidence=ISS]
            [GO:0039003 "pronephric field specification" evidence=ISS]
            [GO:0042472 "inner ear morphogenesis" evidence=ISS] [GO:0043010
            "camera-type eye development" evidence=ISS] [GO:0043066 "negative
            regulation of apoptotic process" evidence=ISS] [GO:0043069
            "negative regulation of programmed cell death" evidence=ISS]
            [GO:0043154 "negative regulation of cysteine-type endopeptidase
            activity involved in apoptotic process" evidence=ISS] [GO:0043234
            "protein complex" evidence=ISS] [GO:0043491 "protein kinase B
            signaling cascade" evidence=ISS] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0045918 "negative regulation of cytolysis"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048793
            "pronephros development" evidence=ISS] [GO:0048854 "brain
            morphogenesis" evidence=ISS] [GO:0048863 "stem cell
            differentiation" evidence=ISS] [GO:0060231 "mesenchymal to
            epithelial transition" evidence=ISS] [GO:0061360 "optic chiasma
            development" evidence=ISS] [GO:0070301 "cellular response to
            hydrogen peroxide" evidence=ISS] [GO:0071300 "cellular response to
            retinoic acid" evidence=ISS] [GO:0071333 "cellular response to
            glucose stimulus" evidence=ISS] [GO:0072075 "metanephric mesenchyme
            development" evidence=ISS] [GO:0072108 "positive regulation of
            mesenchymal to epithelial transition involved in metanephros
            morphogenesis" evidence=ISS] [GO:0072162 "metanephric mesenchymal
            cell differentiation" evidence=ISS] [GO:0072179 "nephric duct
            formation" evidence=ISS] [GO:0072189 "ureter development"
            evidence=ISS] [GO:0072205 "metanephric collecting duct development"
            evidence=ISS] [GO:0072221 "metanephric distal convoluted tubule
            development" evidence=ISS] [GO:0072289 "metanephric nephron tubule
            formation" evidence=ISS] [GO:0072300 "positive regulation of
            metanephric glomerulus development" evidence=ISS] [GO:0072305
            "negative regulation of mesenchymal cell apoptotic process involved
            in metanephric nephron morphogenesis" evidence=ISS] [GO:0072307
            "regulation of metanephric nephron tubule epithelial cell
            differentiation" evidence=ISS] [GO:0072593 "reactive oxygen species
            metabolic process" evidence=ISS] [GO:0090102 "cochlea development"
            evidence=ISS] [GO:0090103 "cochlea morphogenesis" evidence=ISS]
            [GO:0090190 "positive regulation of branching involved in ureteric
            bud morphogenesis" evidence=ISS] [GO:1900212 "negative regulation
            of mesenchymal cell apoptotic process involved in metanephros
            development" evidence=ISS] [GO:1900215 "negative regulation of
            apoptotic process involved in metanephric collecting duct
            development" evidence=ISS] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=ISS] [GO:2000378 "negative regulation of
            reactive oxygen species metabolic process" evidence=ISS]
            [GO:2000594 "positive regulation of metanephric DCT cell
            differentiation" evidence=ISS] [GO:2000597 "positive regulation of
            optic nerve formation" evidence=ISS] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0005634 GO:GO:0045892
            GO:GO:0043154 GO:GO:0043234 GO:GO:0071333 GO:GO:0070301
            GO:GO:0071300 GO:GO:0045944 GO:GO:0048863 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0007501
            GO:GO:0000987 GO:GO:0001843 GO:GO:0072593 GO:GO:0090190
            GO:GO:0072300 GO:GO:0035566 GO:GO:0016175 GO:GO:0043491
            GO:GO:0002072 GO:GO:0035799 GO:GO:0034451 GO:GO:0001658
            GO:GO:2000378 GO:GO:0072205 GO:GO:0001709 GO:GO:0010001
            GO:GO:0048854 GO:GO:0032993 GO:GO:0003337 GO:GO:0001823
            GO:GO:0072221 GO:GO:0045918 GO:GO:0090103 GO:GO:0072179
            GO:GO:0072108 GO:GO:0003406 GO:GO:0021633 GO:GO:0039003
            GO:GO:0072307 GO:GO:0072162 InterPro:IPR022130 Pfam:PF12403
            CTD:5076 GO:GO:0072289 GO:GO:1900215 GO:GO:1900218 GO:GO:0072305
            GO:GO:0061360 GO:GO:2000594 GO:GO:2000597 GO:GO:0021650
            EMBL:FN600706 RefSeq:NP_001171523.1 UniGene:Oar.22837
            ProteinModelPortal:D5GSQ9 SMR:D5GSQ9 GeneID:100422802
            Uniprot:D5GSQ9
        Length = 393

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AEGICDNDT 127


>MGI|MGI:97486 [details] [associations]
            symbol:Pax2 "paired box gene 2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IGI] [GO:0000987 "core promoter
            proximal region sequence-specific DNA binding" evidence=ISO;IDA]
            [GO:0001655 "urogenital system development" evidence=IGI;IMP]
            [GO:0001656 "metanephros development" evidence=IGI;IMP] [GO:0001657
            "ureteric bud development" evidence=IGI] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IGI;IMP]
            [GO:0001709 "cell fate determination" evidence=IMP] [GO:0001822
            "kidney development" evidence=IGI;IMP] [GO:0001823 "mesonephros
            development" evidence=IMP] [GO:0001843 "neural tube closure"
            evidence=IMP] [GO:0002072 "optic cup morphogenesis involved in
            camera-type eye development" evidence=IMP] [GO:0003406 "retinal
            pigment epithelium development" evidence=IMP] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=TAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005667 "transcription factor complex" evidence=TAS]
            [GO:0005764 "lysosome" evidence=ISO] [GO:0005815 "microtubule
            organizing center" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007501
            "mesodermal cell fate specification" evidence=IDA] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISO]
            [GO:0010001 "glial cell differentiation" evidence=IMP] [GO:0016175
            "superoxide-generating NADPH oxidase activity" evidence=IMP]
            [GO:0021554 "optic nerve development" evidence=IMP] [GO:0021631
            "optic nerve morphogenesis" evidence=IMP] [GO:0021633 "optic nerve
            structural organization" evidence=IMP] [GO:0021650
            "vestibulocochlear nerve formation" evidence=IMP] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0032993 "protein-DNA complex"
            evidence=IDA] [GO:0034451 "centriolar satellite" evidence=ISO]
            [GO:0035566 "regulation of metanephros size" evidence=ISO;IMP]
            [GO:0035799 "ureter maturation" evidence=IMP] [GO:0042472 "inner
            ear morphogenesis" evidence=IGI;IMP] [GO:0042981 "regulation of
            apoptotic process" evidence=IMP] [GO:0043010 "camera-type eye
            development" evidence=IMP] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISO;IMP] [GO:0043067 "regulation of
            programmed cell death" evidence=IGI] [GO:0043069 "negative
            regulation of programmed cell death" evidence=IMP] [GO:0043154
            "negative regulation of cysteine-type endopeptidase activity
            involved in apoptotic process" evidence=ISO] [GO:0043234 "protein
            complex" evidence=IDA] [GO:0043491 "protein kinase B signaling
            cascade" evidence=IMP] [GO:0044212 "transcription regulatory region
            DNA binding" evidence=ISO;IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent"
            evidence=ISO;IGI;IDA;IMP] [GO:0045918 "negative regulation of
            cytolysis" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IDA]
            [GO:0048513 "organ development" evidence=ISO] [GO:0048793
            "pronephros development" evidence=IMP] [GO:0048854 "brain
            morphogenesis" evidence=IMP] [GO:0048863 "stem cell
            differentiation" evidence=IDA] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=ISO] [GO:0055114
            "oxidation-reduction process" evidence=IMP] [GO:0060231
            "mesenchymal to epithelial transition" evidence=IMP] [GO:0061205
            "paramesonephric duct development" evidence=IMP] [GO:0061360 "optic
            chiasma development" evidence=IMP] [GO:0070742 "C2H2 zinc finger
            domain binding" evidence=IPI] [GO:0071333 "cellular response to
            glucose stimulus" evidence=IMP] [GO:0072001 "renal system
            development" evidence=IGI] [GO:0072075 "metanephric mesenchyme
            development" evidence=IDA] [GO:0072108 "positive regulation of
            mesenchymal to epithelial transition involved in metanephros
            morphogenesis" evidence=IGI] [GO:0072162 "metanephric mesenchymal
            cell differentiation" evidence=IMP] [GO:0072164 "mesonephric tubule
            development" evidence=IMP] [GO:0072172 "mesonephric tubule
            formation" evidence=IMP] [GO:0072177 "mesonephric duct development"
            evidence=IMP] [GO:0072179 "nephric duct formation" evidence=IDA]
            [GO:0072189 "ureter development" evidence=IMP] [GO:0072205
            "metanephric collecting duct development" evidence=IMP] [GO:0072221
            "metanephric distal convoluted tubule development" evidence=IMP]
            [GO:0072289 "metanephric nephron tubule formation" evidence=IMP]
            [GO:0072300 "positive regulation of metanephric glomerulus
            development" evidence=IMP] [GO:0072305 "negative regulation of
            mesenchymal cell apoptotic process involved in metanephric nephron
            morphogenesis" evidence=IMP] [GO:0072307 "regulation of metanephric
            nephron tubule epithelial cell differentiation" evidence=IMP]
            [GO:0072593 "reactive oxygen species metabolic process"
            evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
            [GO:0090103 "cochlea morphogenesis" evidence=IGI;IMP] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=IMP] [GO:1900212 "negative regulation of
            mesenchymal cell apoptotic process involved in metanephros
            development" evidence=IMP] [GO:1900215 "negative regulation of
            apoptotic process involved in metanephric collecting duct
            development" evidence=IMP] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=IMP] [GO:2000378 "negative regulation of
            reactive oxygen species metabolic process" evidence=ISO]
            [GO:2000594 "positive regulation of metanephric DCT cell
            differentiation" evidence=IMP] [GO:2000597 "positive regulation of
            optic nerve formation" evidence=IMP] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 MGI:MGI:97486 GO:GO:0043154
            GO:GO:0071333 GO:GO:0070301 GO:GO:0071300 GO:GO:0045944
            GO:GO:0048863 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007501
            GO:GO:0000122 GO:GO:0000987 GO:GO:0001843 GO:GO:0072593
            GO:GO:0071260 GO:GO:0090190 GO:GO:0072300 GO:GO:0035566
            GO:GO:0016175 GO:GO:0043491 GO:GO:0002072 GO:GO:0031016
            GO:GO:0035799 GO:GO:0034451 GO:GO:0001658 GO:GO:2000378
            GO:GO:0072205 GO:GO:0001709 GO:GO:0010001 GO:GO:0048854
            GO:GO:0032993 GO:GO:0003337 GO:GO:0072221 GO:GO:0045918
            GO:GO:0090103 GO:GO:0072179 GO:GO:0072108 eggNOG:NOG326044
            GO:GO:0003406 GO:GO:0021633 GO:GO:0061205 GO:GO:0072177
            GO:GO:0039003 GO:GO:0072307 GO:GO:0072162 HOVERGEN:HBG009115
            HOGENOM:HOG000230938 GeneTree:ENSGT00680000099910 KO:K15608
            InterPro:IPR022130 Pfam:PF12403 CTD:5076 OrthoDB:EOG49S66H
            GO:GO:0072289 GO:GO:1900215 GO:GO:1900218 GO:GO:0072305
            GO:GO:0061360 GO:GO:2000594 GO:GO:2000597 GO:GO:0021650 EMBL:X55781
            EMBL:BC148232 EMBL:BC150484 IPI:IPI00229416 IPI:IPI01008143
            PIR:A60086 RefSeq:NP_035167.4 UniGene:Mm.192158
            ProteinModelPortal:P32114 SMR:P32114 IntAct:P32114 STRING:P32114
            PhosphoSite:P32114 PRIDE:P32114 Ensembl:ENSMUST00000174490
            GeneID:18504 KEGG:mmu:18504 UCSC:uc008hpz.1 UCSC:uc008hqa.1
            InParanoid:P32114 NextBio:294220 Bgee:P32114 CleanEx:MM_PAX2
            Genevestigator:P32114 GermOnline:ENSMUSG00000004231 GO:GO:0072172
            GO:GO:0072197 Uniprot:P32114
        Length = 414

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AEGICDNDT 127


>RGD|1305568 [details] [associations]
            symbol:Pax2 "paired box 2" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0000987 "core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA;ISO] [GO:0001655 "urogenital system development"
            evidence=ISO] [GO:0001656 "metanephros development" evidence=ISO]
            [GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001658
            "branching involved in ureteric bud morphogenesis"
            evidence=IEA;ISO] [GO:0001709 "cell fate determination"
            evidence=IEA;ISO] [GO:0001822 "kidney development" evidence=ISO]
            [GO:0001823 "mesonephros development" evidence=ISO] [GO:0001843
            "neural tube closure" evidence=IEA;ISO] [GO:0002072 "optic cup
            morphogenesis involved in camera-type eye development"
            evidence=IEA;ISO] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=IEA] [GO:0003406
            "retinal pigment epithelium development" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005764
            "lysosome" evidence=IDA] [GO:0005815 "microtubule organizing
            center" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA;ISO] [GO:0007501 "mesodermal cell fate specification"
            evidence=IEA;ISO] [GO:0007568 "aging" evidence=IEP] [GO:0008284
            "positive regulation of cell proliferation" evidence=IMP]
            [GO:0010001 "glial cell differentiation" evidence=IEA;ISO]
            [GO:0016175 "superoxide-generating NADPH oxidase activity"
            evidence=IEA;ISO] [GO:0021554 "optic nerve development"
            evidence=ISO] [GO:0021631 "optic nerve morphogenesis" evidence=ISO]
            [GO:0021633 "optic nerve structural organization" evidence=IEA;ISO]
            [GO:0021650 "vestibulocochlear nerve formation" evidence=IEA;ISO]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0031667
            "response to nutrient levels" evidence=IEP] [GO:0032993
            "protein-DNA complex" evidence=IEA;ISO] [GO:0034451 "centriolar
            satellite" evidence=IEA;ISO] [GO:0035566 "regulation of metanephros
            size" evidence=IEA;ISO] [GO:0035799 "ureter maturation"
            evidence=IEA;ISO] [GO:0039003 "pronephric field specification"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=ISO]
            [GO:0042981 "regulation of apoptotic process" evidence=ISO]
            [GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISO]
            [GO:0043067 "regulation of programmed cell death" evidence=ISO]
            [GO:0043069 "negative regulation of programmed cell death"
            evidence=ISO] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process"
            evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
            [GO:0043491 "protein kinase B signaling cascade" evidence=IEA;ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IC]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045918
            "negative regulation of cytolysis" evidence=IEA;ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0048513 "organ development"
            evidence=IMP] [GO:0048793 "pronephros development" evidence=ISO]
            [GO:0048854 "brain morphogenesis" evidence=IEA;ISO] [GO:0048863
            "stem cell differentiation" evidence=IEA;ISO] [GO:0050679 "positive
            regulation of epithelial cell proliferation" evidence=IEA;ISO]
            [GO:0055114 "oxidation-reduction process" evidence=ISO] [GO:0060231
            "mesenchymal to epithelial transition" evidence=ISO] [GO:0061205
            "paramesonephric duct development" evidence=IEA;ISO] [GO:0061360
            "optic chiasma development" evidence=IEA;ISO] [GO:0070301 "cellular
            response to hydrogen peroxide" evidence=IEA] [GO:0070742 "C2H2 zinc
            finger domain binding" evidence=IEA;ISO] [GO:0071260 "cellular
            response to mechanical stimulus" evidence=IEA] [GO:0071300
            "cellular response to retinoic acid" evidence=IEA] [GO:0071333
            "cellular response to glucose stimulus" evidence=IEA;ISO]
            [GO:0071364 "cellular response to epidermal growth factor stimulus"
            evidence=IEP] [GO:0072001 "renal system development" evidence=ISO]
            [GO:0072075 "metanephric mesenchyme development" evidence=ISO]
            [GO:0072108 "positive regulation of mesenchymal to epithelial
            transition involved in metanephros morphogenesis" evidence=IEA;ISO]
            [GO:0072162 "metanephric mesenchymal cell differentiation"
            evidence=IEA;ISO] [GO:0072164 "mesonephric tubule development"
            evidence=ISO] [GO:0072172 "mesonephric tubule formation"
            evidence=IEA;ISO] [GO:0072177 "mesonephric duct development"
            evidence=IEA;ISO] [GO:0072179 "nephric duct formation"
            evidence=IEA;ISO] [GO:0072189 "ureter development" evidence=ISO]
            [GO:0072197 "ureter morphogenesis" evidence=IEA] [GO:0072205
            "metanephric collecting duct development" evidence=IEA;ISO]
            [GO:0072207 "metanephric epithelium development" evidence=ISO]
            [GO:0072221 "metanephric distal convoluted tubule development"
            evidence=IEA;ISO] [GO:0072289 "metanephric nephron tubule
            formation" evidence=IEA;ISO] [GO:0072300 "positive regulation of
            metanephric glomerulus development" evidence=IEA;ISO] [GO:0072305
            "negative regulation of mesenchymal cell apoptotic process involved
            in metanephric nephron morphogenesis" evidence=IEA;ISO] [GO:0072307
            "regulation of metanephric nephron tubule epithelial cell
            differentiation" evidence=IEA;ISO] [GO:0072593 "reactive oxygen
            species metabolic process" evidence=IEA;ISO] [GO:0090102 "cochlea
            development" evidence=ISO] [GO:0090103 "cochlea morphogenesis"
            evidence=IEA;ISO] [GO:0090190 "positive regulation of branching
            involved in ureteric bud morphogenesis" evidence=IEA;ISO]
            [GO:1900212 "negative regulation of mesenchymal cell apoptotic
            process involved in metanephros development" evidence=ISO]
            [GO:1900215 "negative regulation of apoptotic process involved in
            metanephric collecting duct development" evidence=IEA;ISO]
            [GO:1900218 "negative regulation of apoptotic process involved in
            metanephric nephron tubule development" evidence=IEA;ISO]
            [GO:2000378 "negative regulation of reactive oxygen species
            metabolic process" evidence=IEA;ISO] [GO:2000594 "positive
            regulation of metanephric DCT cell differentiation"
            evidence=IEA;ISO] [GO:2000597 "positive regulation of optic nerve
            formation" evidence=IEA;ISO] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 RGD:1305568 GO:GO:0005634 GO:GO:0008284 GO:GO:0007568
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0005764 SUPFAM:SSF46689 GO:GO:0031667
            GO:GO:0071364 GO:GO:0048513 InterPro:IPR022130 Pfam:PF12403
            IPI:IPI00566240 Ensembl:ENSRNOT00000019197 UCSC:RGD:1305568
            Uniprot:D4AE46
        Length = 393

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AEGICDNDT 127


>UNIPROTKB|D4ACZ2 [details] [associations]
            symbol:Pax2 "Paired box gene 2 (Predicted)" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000987 "core promoter proximal region sequence-specific DNA
            binding" evidence=ISS] [GO:0001655 "urogenital system development"
            evidence=ISS] [GO:0001658 "branching involved in ureteric bud
            morphogenesis" evidence=ISS] [GO:0001709 "cell fate determination"
            evidence=ISS] [GO:0001823 "mesonephros development" evidence=ISS]
            [GO:0001843 "neural tube closure" evidence=ISS] [GO:0002072 "optic
            cup morphogenesis involved in camera-type eye development"
            evidence=ISS] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=ISS] [GO:0003406
            "retinal pigment epithelium development" evidence=ISS] [GO:0003677
            "DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005815 "microtubule organizing center" evidence=ISS]
            [GO:0006351 "transcription, DNA-dependent" evidence=ISS]
            [GO:0007501 "mesodermal cell fate specification" evidence=ISS]
            [GO:0010001 "glial cell differentiation" evidence=ISS] [GO:0016175
            "superoxide-generating NADPH oxidase activity" evidence=ISS]
            [GO:0021554 "optic nerve development" evidence=ISS] [GO:0021631
            "optic nerve morphogenesis" evidence=ISS] [GO:0021633 "optic nerve
            structural organization" evidence=ISS] [GO:0021650
            "vestibulocochlear nerve formation" evidence=ISS] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0032993 "protein-DNA
            complex" evidence=ISS] [GO:0034451 "centriolar satellite"
            evidence=ISS] [GO:0035566 "regulation of metanephros size"
            evidence=ISS] [GO:0035799 "ureter maturation" evidence=ISS]
            [GO:0039003 "pronephric field specification" evidence=ISS]
            [GO:0042472 "inner ear morphogenesis" evidence=ISS] [GO:0043010
            "camera-type eye development" evidence=ISS] [GO:0043066 "negative
            regulation of apoptotic process" evidence=ISS] [GO:0043069
            "negative regulation of programmed cell death" evidence=ISS]
            [GO:0043154 "negative regulation of cysteine-type endopeptidase
            activity involved in apoptotic process" evidence=ISS] [GO:0043234
            "protein complex" evidence=ISS] [GO:0043491 "protein kinase B
            signaling cascade" evidence=ISS] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0045918 "negative regulation of cytolysis"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048793
            "pronephros development" evidence=ISS] [GO:0048854 "brain
            morphogenesis" evidence=ISS] [GO:0048863 "stem cell
            differentiation" evidence=ISS] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0060231
            "mesenchymal to epithelial transition" evidence=ISS] [GO:0061205
            "paramesonephric duct development" evidence=IEA] [GO:0061360 "optic
            chiasma development" evidence=ISS] [GO:0070301 "cellular response
            to hydrogen peroxide" evidence=ISS] [GO:0070742 "C2H2 zinc finger
            domain binding" evidence=IEA] [GO:0071260 "cellular response to
            mechanical stimulus" evidence=IEA] [GO:0071300 "cellular response
            to retinoic acid" evidence=ISS] [GO:0071333 "cellular response to
            glucose stimulus" evidence=ISS] [GO:0072075 "metanephric mesenchyme
            development" evidence=ISS] [GO:0072108 "positive regulation of
            mesenchymal to epithelial transition involved in metanephros
            morphogenesis" evidence=ISS] [GO:0072162 "metanephric mesenchymal
            cell differentiation" evidence=ISS] [GO:0072172 "mesonephric tubule
            formation" evidence=IEA] [GO:0072177 "mesonephric duct development"
            evidence=IEA] [GO:0072179 "nephric duct formation" evidence=ISS]
            [GO:0072189 "ureter development" evidence=ISS] [GO:0072197 "ureter
            morphogenesis" evidence=IEA] [GO:0072205 "metanephric collecting
            duct development" evidence=ISS] [GO:0072221 "metanephric distal
            convoluted tubule development" evidence=ISS] [GO:0072289
            "metanephric nephron tubule formation" evidence=ISS] [GO:0072300
            "positive regulation of metanephric glomerulus development"
            evidence=ISS] [GO:0072305 "negative regulation of mesenchymal cell
            apoptotic process involved in metanephric nephron morphogenesis"
            evidence=ISS] [GO:0072307 "regulation of metanephric nephron tubule
            epithelial cell differentiation" evidence=ISS] [GO:0072593
            "reactive oxygen species metabolic process" evidence=ISS]
            [GO:0090102 "cochlea development" evidence=ISS] [GO:0090103
            "cochlea morphogenesis" evidence=ISS] [GO:0090190 "positive
            regulation of branching involved in ureteric bud morphogenesis"
            evidence=ISS] [GO:1900212 "negative regulation of mesenchymal cell
            apoptotic process involved in metanephros development"
            evidence=ISS] [GO:1900215 "negative regulation of apoptotic process
            involved in metanephric collecting duct development" evidence=ISS]
            [GO:1900218 "negative regulation of apoptotic process involved in
            metanephric nephron tubule development" evidence=ISS] [GO:2000378
            "negative regulation of reactive oxygen species metabolic process"
            evidence=ISS] [GO:2000594 "positive regulation of metanephric DCT
            cell differentiation" evidence=ISS] [GO:2000597 "positive
            regulation of optic nerve formation" evidence=ISS]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 RGD:1305568
            GO:GO:0005634 GO:GO:0045892 GO:GO:0043154 GO:GO:0043234
            GO:GO:0071333 GO:GO:0070301 GO:GO:0071300 GO:GO:0045944
            GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0007501 GO:GO:0000122 GO:GO:0000987
            GO:GO:0001843 GO:GO:0072593 GO:GO:0090190 GO:GO:0072300
            GO:GO:0035566 GO:GO:0016175 GO:GO:0043491 GO:GO:0002072
            GO:GO:0035799 GO:GO:0034451 GO:GO:0001658 GO:GO:2000378
            GO:GO:0072205 GO:GO:0001709 GO:GO:0050679 GO:GO:0010001
            GO:GO:0048854 GO:GO:0032993 GO:GO:0003337 GO:GO:0001823
            GO:GO:0072221 GO:GO:0045918 GO:GO:0090103 EMBL:CH473986
            GO:GO:0072179 GO:GO:0072108 GO:GO:0003406 GO:GO:0021633
            GO:GO:0039003 GO:GO:0072307 GO:GO:0072162
            GeneTree:ENSGT00680000099910 KO:K15608 InterPro:IPR022130
            Pfam:PF12403 CTD:5076 OMA:TYPVVTX OrthoDB:EOG49S66H GO:GO:0072289
            GO:GO:1900215 GO:GO:1900218 GO:GO:0072305 GO:GO:0061360
            GO:GO:2000594 GO:GO:2000597 GO:GO:0021650 IPI:IPI00364303
            RefSeq:NP_001099831.1 UniGene:Rn.137112 Ensembl:ENSRNOT00000050076
            GeneID:293992 KEGG:rno:293992 NextBio:637372 Uniprot:D4ACZ2
        Length = 416

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    43 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 102

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:   103 RQNPTMFAWEIRDRLL-AEGICDNDT 127


>UNIPROTKB|F1NWR1 [details] [associations]
            symbol:PAX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000987 "core promoter proximal region
            sequence-specific DNA binding" evidence=IEA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001709
            "cell fate determination" evidence=IEA] [GO:0001843 "neural tube
            closure" evidence=IEA] [GO:0002072 "optic cup morphogenesis
            involved in camera-type eye development" evidence=IEA] [GO:0003337
            "mesenchymal to epithelial transition involved in metanephros
            morphogenesis" evidence=IEA] [GO:0003406 "retinal pigment
            epithelium development" evidence=IEA] [GO:0007501 "mesodermal cell
            fate specification" evidence=IEA] [GO:0010001 "glial cell
            differentiation" evidence=IEA] [GO:0016175 "superoxide-generating
            NADPH oxidase activity" evidence=IEA] [GO:0021633 "optic nerve
            structural organization" evidence=IEA] [GO:0021650
            "vestibulocochlear nerve formation" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0032993 "protein-DNA
            complex" evidence=IEA] [GO:0034451 "centriolar satellite"
            evidence=IEA] [GO:0035566 "regulation of metanephros size"
            evidence=IEA] [GO:0035799 "ureter maturation" evidence=IEA]
            [GO:0039003 "pronephric field specification" evidence=IEA]
            [GO:0043154 "negative regulation of cysteine-type endopeptidase
            activity involved in apoptotic process" evidence=IEA] [GO:0043234
            "protein complex" evidence=IEA] [GO:0043491 "protein kinase B
            signaling cascade" evidence=IEA] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0045918
            "negative regulation of cytolysis" evidence=IEA] [GO:0048854 "brain
            morphogenesis" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0061205
            "paramesonephric duct development" evidence=IEA] [GO:0061360 "optic
            chiasma development" evidence=IEA] [GO:0070301 "cellular response
            to hydrogen peroxide" evidence=IEA] [GO:0070742 "C2H2 zinc finger
            domain binding" evidence=IEA] [GO:0071260 "cellular response to
            mechanical stimulus" evidence=IEA] [GO:0071300 "cellular response
            to retinoic acid" evidence=IEA] [GO:0071333 "cellular response to
            glucose stimulus" evidence=IEA] [GO:0072108 "positive regulation of
            mesenchymal to epithelial transition involved in metanephros
            morphogenesis" evidence=IEA] [GO:0072162 "metanephric mesenchymal
            cell differentiation" evidence=IEA] [GO:0072172 "mesonephric tubule
            formation" evidence=IEA] [GO:0072177 "mesonephric duct development"
            evidence=IEA] [GO:0072179 "nephric duct formation" evidence=IEA]
            [GO:0072197 "ureter morphogenesis" evidence=IEA] [GO:0072205
            "metanephric collecting duct development" evidence=IEA] [GO:0072221
            "metanephric distal convoluted tubule development" evidence=IEA]
            [GO:0072289 "metanephric nephron tubule formation" evidence=IEA]
            [GO:0072300 "positive regulation of metanephric glomerulus
            development" evidence=IEA] [GO:0072305 "negative regulation of
            mesenchymal cell apoptotic process involved in metanephric nephron
            morphogenesis" evidence=IEA] [GO:0072307 "regulation of metanephric
            nephron tubule epithelial cell differentiation" evidence=IEA]
            [GO:0072593 "reactive oxygen species metabolic process"
            evidence=IEA] [GO:0090103 "cochlea morphogenesis" evidence=IEA]
            [GO:0090190 "positive regulation of branching involved in ureteric
            bud morphogenesis" evidence=IEA] [GO:1900215 "negative regulation
            of apoptotic process involved in metanephric collecting duct
            development" evidence=IEA] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=IEA] [GO:2000378 "negative regulation of
            reactive oxygen species metabolic process" evidence=IEA]
            [GO:2000594 "positive regulation of metanephric DCT cell
            differentiation" evidence=IEA] [GO:2000597 "positive regulation of
            optic nerve formation" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043066 GO:GO:0043154 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0000987 GO:GO:0034451 GO:GO:2000378 GO:GO:0001709
            GO:GO:0050679 GO:GO:0045918 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 OMA:TYPVVTX EMBL:AADN02027800
            EMBL:AADN02027801 EMBL:AADN02027802 EMBL:AADN02027803
            EMBL:AADN02027804 IPI:IPI00820975 Ensembl:ENSGALT00000040174
            ArrayExpress:F1NWR1 Uniprot:F1NWR1
        Length = 453

 Score = 298 (110.0 bits), Expect = 2.9e-26, P = 2.9e-26
 Identities = 57/86 (66%), Positives = 69/86 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL RY ETGSI+PGVIGGSKP+VATP V  +I EYK
Sbjct:    34 LAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYK 93

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDT 86
             + NP + +WE+RD+L+    + D+DT
Sbjct:    94 RQNPTMFAWEIRDRLL-AEGICDNDT 118


>ZFIN|ZDB-GENE-001030-2 [details] [associations]
            symbol:pax5 "paired box gene 5" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 ZFIN:ZDB-GENE-001030-2 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099910
            InterPro:IPR022130 Pfam:PF12403 EMBL:BX511134 IPI:IPI00509860
            Ensembl:ENSDART00000076986 ArrayExpress:E7FB46 Bgee:E7FB46
            Uniprot:E7FB46
        Length = 424

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 57/87 (65%), Positives = 71/87 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKIL-NRYQETGSIRPGVIGGSKPRVATPDVEKRIEEY 59
             +A  GVRPC ISRQLRVSHGCVSKIL +RY ETGSIRPGVIGGSKP+VATP V  +I +Y
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGSRYYETGSIRPGVIGGSKPKVATPKVVDKIADY 103

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDT 86
             K+ NP + +WE+RD+L+   R+ D+D+
Sbjct:   104 KRQNPTMFAWEIRDRLL-AERVCDNDS 129


>UNIPROTKB|F1MYE7 [details] [associations]
            symbol:PAX4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045597 "positive
            regulation of cell differentiation" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045597 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
            GeneTree:ENSGT00680000099553 OMA:ESLGPSC EMBL:DAAA02011492
            IPI:IPI00842045 Ensembl:ENSBTAT00000045264 Uniprot:F1MYE7
        Length = 334

 Score = 215 (80.7 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
 Identities = 49/112 (43%), Positives = 65/112 (58%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G+RPC ISR L+VS+GCVSKIL RY  TG + P  IGGSKPR+ATP V  RI + K
Sbjct:    33 LAISGMRPCDISRSLKVSNGCVSKILGRYYRTGVLEPKGIGGSKPRLATPPVVARIAQLK 92

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQL 110
                P + +WE++ +L          T S   I  VL+  Q   R  +   +L
Sbjct:    93 GQCPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLRALQEDQRPPWIHLRL 144

 Score = 90 (36.7 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+  Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   172 RNRTIFSPGQAEALEKEFQRGQYPDSVARGKLAAATSLPEDTVR 215


>UNIPROTKB|I3LUF8 [details] [associations]
            symbol:PAX8 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000612 "regulation
            of thyroid-stimulating hormone secretion" evidence=IEA] [GO:2000611
            "positive regulation of thyroid hormone generation" evidence=IEA]
            [GO:2000594 "positive regulation of metanephric DCT cell
            differentiation" evidence=IEA] [GO:1900218 "negative regulation of
            apoptotic process involved in metanephric nephron tubule
            development" evidence=IEA] [GO:1900215 "negative regulation of
            apoptotic process involved in metanephric collecting duct
            development" evidence=IEA] [GO:0090190 "positive regulation of
            branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:0072307 "regulation of metanephric nephron tubule epithelial
            cell differentiation" evidence=IEA] [GO:0072305 "negative
            regulation of mesenchymal cell apoptotic process involved in
            metanephric nephron morphogenesis" evidence=IEA] [GO:0072289
            "metanephric nephron tubule formation" evidence=IEA] [GO:0072284
            "metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0072278
            "metanephric comma-shaped body morphogenesis" evidence=IEA]
            [GO:0072221 "metanephric distal convoluted tubule development"
            evidence=IEA] [GO:0072164 "mesonephric tubule development"
            evidence=IEA] [GO:0072108 "positive regulation of mesenchymal to
            epithelial transition involved in metanephros morphogenesis"
            evidence=IEA] [GO:0071599 "otic vesicle development" evidence=IEA]
            [GO:0071371 "cellular response to gonadotropin stimulus"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
            evidence=IEA] [GO:0039003 "pronephric field specification"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0003337 "mesenchymal to epithelial
            transition involved in metanephros morphogenesis" evidence=IEA]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0005634 GO:GO:0045893
            GO:GO:0007417 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0090190
            GO:GO:0071599 GO:GO:0001658 GO:GO:0000979 GO:GO:0003337
            GO:GO:0072221 GO:GO:0071371 GO:GO:0030878 GO:GO:2000611
            GO:GO:0072108 GO:GO:0072278 GO:GO:0072284 GO:GO:0039003
            GO:GO:0072307 GeneTree:ENSGT00680000099910 GO:GO:0072289
            GO:GO:1900215 GO:GO:1900218 GO:GO:0072305 GO:GO:2000594
            GO:GO:2000612 GO:GO:0072164 Ensembl:ENSSSCT00000024865
            Uniprot:I3LUF8
        Length = 373

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 57/88 (64%), Positives = 71/88 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKIL--NRYQETGSIRPGVIGGSKPRVATPDVEKRIEE 58
             +A  GVRPC ISRQLRVSHGCVSKIL  +RY ETGSIRPGVIGGSKP+VATP V ++I +
Sbjct:    37 LAHQGVRPCDISRQLRVSHGCVSKILGRSRYYETGSIRPGVIGGSKPKVATPKVVEKIGD 96

Query:    59 YKKTNPNITSWEVRDKLIKVSRLDDSDT 86
             YK+ NP + +WE+RD+L+    + D+DT
Sbjct:    97 YKRQNPTMFAWEIRDRLL-AEGVCDNDT 123


>ZFIN|ZDB-GENE-070112-182 [details] [associations]
            symbol:pax1a "paired box 1a" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            ZFIN:ZDB-GENE-070112-182 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GeneTree:ENSGT00680000099553 EMBL:BX927409
            IPI:IPI00829122 Ensembl:ENSDART00000020156 OMA:MEEWSSV Bgee:F1QRF4
            Uniprot:F1QRF4
        Length = 359

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 57/99 (57%), Positives = 71/99 (71%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:    37 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKNIRDYK 96

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             +++P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    97 QSDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 135


>UNIPROTKB|E2REB7 [details] [associations]
            symbol:PAX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 OMA:ESLGPSC EMBL:AAEX03009276
            Ensembl:ENSCAFT00000002692 Uniprot:E2REB7
        Length = 345

 Score = 214 (80.4 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
 Identities = 51/112 (45%), Positives = 66/112 (58%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G+RPC ISR L+VS+GCVSKIL RY  TG + P  IGGSKPR+ATP V  RI + K
Sbjct:    33 LAVSGMRPCDISRSLKVSNGCVSKILARYYRTGVLEPKGIGGSKPRLATPPVVARIAQLK 92

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQL 110
                P + +WE++ +L          T S   I  VL+  Q   R  +  AQL
Sbjct:    93 GECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLRALQEDQRLPW--AQL 142

 Score = 90 (36.7 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+  Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   172 RNRTIFSPGQAEALEKEFQRGQYPDSVARGKLAAATSLPEDTVR 215


>UNIPROTKB|P47236 [details] [associations]
            symbol:PAX1 "Paired box protein Pax-1" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 EMBL:U22046 EMBL:X82442
            IPI:IPI00596371 PIR:I50673 ProteinModelPortal:P47236 SMR:P47236
            HOVERGEN:HBG009115 Uniprot:P47236
        Length = 203

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 57/99 (57%), Positives = 70/99 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:    31 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYK 90

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    91 QGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 129


>RGD|1588548 [details] [associations]
            symbol:Pax1 "paired box 1" species:10116 "Rattus norvegicus"
            [GO:0001501 "skeletal system development" evidence=ISO] [GO:0001756
            "somitogenesis" evidence=IEA;ISO] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=ISO] [GO:0008283 "cell
            proliferation" evidence=IEA;ISO] [GO:0043367 "CD4-positive,
            alpha-beta T cell differentiation" evidence=IEA;ISO] [GO:0043374
            "CD8-positive, alpha-beta T cell differentiation" evidence=IEA;ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0048538 "thymus
            development" evidence=IEA;ISO] [GO:0060017 "parathyroid gland
            development" evidence=IEA;ISO] [GO:0060349 "bone morphogenesis"
            evidence=IEA;ISO] [GO:0061056 "sclerotome development"
            evidence=IEA] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            RGD:1588548 GO:GO:0005634 GO:GO:0003677 GO:GO:0008283 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0001756 GO:GO:0048538 GO:GO:0060349 GO:GO:0060017
            GeneTree:ENSGT00680000099553 GO:GO:0043374 GO:GO:0043367
            OMA:HGLPIPA GO:GO:0061056 IPI:IPI00870727
            Ensembl:ENSRNOT00000067983 UCSC:RGD:1588548 ArrayExpress:F1LT82
            Uniprot:F1LT82
        Length = 361

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 57/99 (57%), Positives = 70/99 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:    30 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYK 89

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    90 QGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 128


>ZFIN|ZDB-GENE-980526-399 [details] [associations]
            symbol:pax9 "paired box gene 9" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0060022 "hard palate development"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            ZFIN:ZDB-GENE-980526-399 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0060022 GeneTree:ENSGT00680000099553
            HOVERGEN:HBG009115 eggNOG:NOG252808 HOGENOM:HOG000230938 KO:K09382
            HSSP:Q02548 CTD:5083 OMA:WQHAGST OrthoDB:EOG4RBQJV EMBL:BX511145
            EMBL:U40931 IPI:IPI00494419 RefSeq:NP_571373.1 UniGene:Dr.1467
            SMR:Q98865 STRING:Q98865 Ensembl:ENSDART00000075936 GeneID:30558
            KEGG:dre:30558 InParanoid:Q98865 NextBio:20806933 Uniprot:Q98865
        Length = 343

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 63/121 (52%), Positives = 77/121 (63%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I  YK
Sbjct:    32 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRTYK 91

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRS 120
             + +P I +WE+RD+L+     D  +  S   I    +  R++    S Q  + E S Q S
Sbjct:    92 QRDPGIFAWEIRDRLLADGVCDKFNLPSVSSI---SRILRNKIGNLSQQ-NQYESSKQAS 147

Query:   121 H 121
             H
Sbjct:   148 H 148


>ZFIN|ZDB-GENE-060503-372 [details] [associations]
            symbol:pax1b "paired box 1b" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 ZFIN:ZDB-GENE-060503-372 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099553
            EMBL:BX663521 IPI:IPI00505096 Ensembl:ENSDART00000112872
            Bgee:F1QIW7 Uniprot:F1QIW7
        Length = 345

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 57/99 (57%), Positives = 70/99 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:    39 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKSIRDYK 98

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    99 QGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 137


>RGD|620433 [details] [associations]
            symbol:Pax4 "paired box 4" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEP]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0042493
            "response to drug" evidence=IEP] [GO:0043066 "negative regulation
            of apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0045595 "regulation of cell
            differentiation" evidence=ISO] [GO:0045597 "positive regulation of
            cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0051591 "response to cAMP" evidence=IEP] [GO:0060041 "retina
            development in camera-type eye" evidence=IEP] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:620433
            GO:GO:0005634 GO:GO:0045892 GO:GO:0043066 GO:GO:0030154
            GO:GO:0042493 GO:GO:0007623 GO:GO:0043565 GO:GO:0045597
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
            GO:GO:0003690 GO:GO:0051591 HOVERGEN:HBG009115 HOGENOM:HOG000230939
            CTD:5078 eggNOG:NOG309473 KO:K08032 OrthoDB:EOG4WQ12T EMBL:AF053100
            EMBL:AF053101 EMBL:AF053102 EMBL:AF053103 EMBL:AF198155
            EMBL:AF198156 IPI:IPI00209542 IPI:IPI00230812 IPI:IPI00230813
            IPI:IPI00566775 PIR:JE0202 RefSeq:NP_113987.1 UniGene:Rn.14531
            ProteinModelPortal:O88436 SMR:O88436 STRING:O88436 GeneID:83630
            KEGG:rno:83630 UCSC:RGD:620433 NextBio:616215 ArrayExpress:O88436
            Genevestigator:O88436 GermOnline:ENSRNOG00000008020 Uniprot:O88436
        Length = 349

 Score = 213 (80.0 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
 Identities = 48/108 (44%), Positives = 65/108 (60%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISR L+VS+GCVSKIL RY  TG + P  IGGSKPR+ATP V  RI + K
Sbjct:    33 LAIRGMRPCDISRSLKVSNGCVSKILGRYYRTGVLEPKGIGGSKPRLATPAVVARIAQLK 92

Query:    61 KTNPNITSWEVRDKLIK--VSRLDDSDTESEPGIVLKRKQRRSRTTFT 106
                P + +WE++ +L    +   D + + S    VL+  Q   R  +T
Sbjct:    93 DEYPALFAWEIQRQLCAEGLCTQDKAPSVSSINRVLRALQEDQRLHWT 140

 Score = 90 (36.7 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+  Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   172 RNRTIFSPGQAEALEKEFQRGQYPDSVVRGKLAAATSLPEDTVR 215


>UNIPROTKB|O88436 [details] [associations]
            symbol:Pax4 "Paired box protein Pax-4" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 RGD:620433 GO:GO:0005634 GO:GO:0045892 GO:GO:0043066
            GO:GO:0030154 GO:GO:0042493 GO:GO:0007623 GO:GO:0043565
            GO:GO:0045597 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0060041 GO:GO:0003690 GO:GO:0051591 HOVERGEN:HBG009115
            HOGENOM:HOG000230939 CTD:5078 eggNOG:NOG309473 KO:K08032
            OrthoDB:EOG4WQ12T EMBL:AF053100 EMBL:AF053101 EMBL:AF053102
            EMBL:AF053103 EMBL:AF198155 EMBL:AF198156 IPI:IPI00209542
            IPI:IPI00230812 IPI:IPI00230813 IPI:IPI00566775 PIR:JE0202
            RefSeq:NP_113987.1 UniGene:Rn.14531 ProteinModelPortal:O88436
            SMR:O88436 STRING:O88436 GeneID:83630 KEGG:rno:83630
            UCSC:RGD:620433 NextBio:616215 ArrayExpress:O88436
            Genevestigator:O88436 GermOnline:ENSRNOG00000008020 Uniprot:O88436
        Length = 349

 Score = 213 (80.0 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
 Identities = 48/108 (44%), Positives = 65/108 (60%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISR L+VS+GCVSKIL RY  TG + P  IGGSKPR+ATP V  RI + K
Sbjct:    33 LAIRGMRPCDISRSLKVSNGCVSKILGRYYRTGVLEPKGIGGSKPRLATPAVVARIAQLK 92

Query:    61 KTNPNITSWEVRDKLIK--VSRLDDSDTESEPGIVLKRKQRRSRTTFT 106
                P + +WE++ +L    +   D + + S    VL+  Q   R  +T
Sbjct:    93 DEYPALFAWEIQRQLCAEGLCTQDKAPSVSSINRVLRALQEDQRLHWT 140

 Score = 90 (36.7 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+  Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   172 RNRTIFSPGQAEALEKEFQRGQYPDSVVRGKLAAATSLPEDTVR 215


>MGI|MGI:97485 [details] [associations]
            symbol:Pax1 "paired box gene 1" species:10090 "Mus musculus"
            [GO:0001501 "skeletal system development" evidence=IGI;IMP]
            [GO:0001756 "somitogenesis" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IMP] [GO:0008283 "cell proliferation"
            evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=TAS]
            [GO:0043367 "CD4-positive, alpha-beta T cell differentiation"
            evidence=IMP] [GO:0043374 "CD8-positive, alpha-beta T cell
            differentiation" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI]
            [GO:0048538 "thymus development" evidence=IGI] [GO:0060017
            "parathyroid gland development" evidence=IGI] [GO:0060349 "bone
            morphogenesis" evidence=IMP] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 MGI:MGI:97485 GO:GO:0003677 GO:GO:0008283
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001756
            GO:GO:0048538 GO:GO:0060349 GO:GO:0060017
            GeneTree:ENSGT00680000099553 GO:GO:0043374 GO:GO:0043367
            HOVERGEN:HBG009115 CTD:5075 eggNOG:NOG252808 HOGENOM:HOG000230938
            KO:K09382 OMA:HGLPIPA OrthoDB:EOG4W6NW9 GO:GO:0061056 EMBL:AJ133503
            EMBL:AJ133504 EMBL:AJ133505 EMBL:AL805918 EMBL:M69222 EMBL:M20978
            IPI:IPI00331536 PIR:A29902 PIR:A40023 RefSeq:NP_032806.2
            UniGene:Mm.315502 ProteinModelPortal:P09084 SMR:P09084
            STRING:P09084 PhosphoSite:P09084 PRIDE:P09084
            Ensembl:ENSMUST00000109968 GeneID:18503 KEGG:mmu:18503
            UCSC:uc008msx.2 InParanoid:P09084 NextBio:294216 Bgee:P09084
            CleanEx:MM_PAX1 Genevestigator:P09084 GermOnline:ENSMUSG00000037034
            Uniprot:P09084
        Length = 446

 Score = 285 (105.4 bits), Expect = 8.2e-25, P = 8.2e-25
 Identities = 57/99 (57%), Positives = 70/99 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:   117 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYK 176

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:   177 QGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 215


>MGI|MGI:97488 [details] [associations]
            symbol:Pax4 "paired box gene 4" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=TAS] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0009887 "organ morphogenesis"
            evidence=TAS] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045595 "regulation of cell differentiation"
            evidence=IMP] [GO:0045597 "positive regulation of cell
            differentiation" evidence=IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] Reactome:REACT_13641
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 MGI:MGI:97488 GO:GO:0030154
            GO:GO:0042493 GO:GO:0003677 GO:GO:0007623 GO:GO:0043565
            GO:GO:0045597 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0000122 GO:GO:0009887 GO:GO:0060041 GO:GO:0003690
            GO:GO:0031018 GO:GO:0051591 GeneTree:ENSGT00680000099553
            HOVERGEN:HBG009115 HOGENOM:HOG000230939 CTD:5078 eggNOG:NOG309473
            KO:K08032 EMBL:AF031150 EMBL:AB008912 EMBL:AB010557 EMBL:AB010558
            EMBL:AF145233 EMBL:AF142321 EMBL:BC145168 EMBL:AF104231 EMBL:Y09584
            IPI:IPI00135172 IPI:IPI00222257 IPI:IPI00222258 PIR:A41061
            PIR:JC5827 PIR:JC5961 PIR:JC5962 RefSeq:NP_001153397.1
            RefSeq:NP_001153398.1 RefSeq:NP_035168.1 UniGene:Mm.8026
            ProteinModelPortal:P32115 SMR:P32115 STRING:P32115 PRIDE:P32115
            Ensembl:ENSMUST00000031718 Ensembl:ENSMUST00000164519 GeneID:18506
            KEGG:mmu:18506 UCSC:uc012eit.1 InParanoid:P32115 OMA:ESLGPSC
            OrthoDB:EOG4WQ12T NextBio:294228 Bgee:P32115 CleanEx:MM_PAX4
            Genevestigator:P32115 GermOnline:ENSMUSG00000029706 Uniprot:P32115
        Length = 349

 Score = 212 (79.7 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
 Identities = 41/75 (54%), Positives = 53/75 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISR L+VS+GCVSKIL RY  TG + P  IGGSKPR+ATP V  RI + K
Sbjct:    33 LAIRGMRPCDISRSLKVSNGCVSKILGRYYRTGVLEPKCIGGSKPRLATPAVVARIAQLK 92

Query:    61 KTNPNITSWEVRDKL 75
                P + +WE++ +L
Sbjct:    93 DEYPALFAWEIQHQL 107

 Score = 90 (36.7 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+  Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   172 RNRTIFSPGQAEALEKEFQRGQYPDSVARGKLAAATSLPEDTVR 215


>UNIPROTKB|F1MH87 [details] [associations]
            symbol:PAX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0061056 "sclerotome
            development" evidence=IEA] [GO:0060349 "bone morphogenesis"
            evidence=IEA] [GO:0060017 "parathyroid gland development"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043374 "CD8-positive,
            alpha-beta T cell differentiation" evidence=IEA] [GO:0043367
            "CD4-positive, alpha-beta T cell differentiation" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            GO:GO:0005634 GO:GO:0003677 GO:GO:0008283 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0001756 GO:GO:0048538 GO:GO:0060349 GO:GO:0060017
            GeneTree:ENSGT00680000099553 GO:GO:0043374 GO:GO:0043367
            OMA:HGLPIPA GO:GO:0061056 EMBL:DAAA02035821 EMBL:DAAA02035822
            IPI:IPI01002254 Ensembl:ENSBTAT00000008861 Uniprot:F1MH87
        Length = 452

 Score = 285 (105.4 bits), Expect = 9.1e-25, P = 9.1e-25
 Identities = 57/99 (57%), Positives = 70/99 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:   121 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYK 180

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:   181 QGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 219


>UNIPROTKB|J3KPG0 [details] [associations]
            symbol:PAX4 "Paired box protein Pax-4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC073934
            HGNC:HGNC:8618 OMA:ESLGPSC ProteinModelPortal:J3KPG0
            Ensembl:ENST00000378740 Uniprot:J3KPG0
        Length = 348

 Score = 209 (78.6 bits), Expect = 9.9e-25, Sum P(2) = 9.9e-25
 Identities = 47/100 (47%), Positives = 61/100 (61%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G+RPC ISR L+VS+GCVSKIL RY  TG + P  IGGSKPR+ATP V  RI + K
Sbjct:    33 LAVSGMRPCDISRILKVSNGCVSKILGRYYRTGVLEPKGIGGSKPRLATPPVVARIAQLK 92

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQ 98
                P + +WE++ +L          T S   I  VL+  Q
Sbjct:    93 GECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLRALQ 132

 Score = 93 (37.8 bits), Expect = 9.9e-25, Sum P(2) = 9.9e-25
 Identities = 20/44 (45%), Positives = 25/44 (56%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+ +Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   172 RNRTIFSPSQAEALEKEFQRGQYPDSVARGKLATATSLPEDTVR 215


>UNIPROTKB|O43316 [details] [associations]
            symbol:PAX4 "Paired box protein Pax-4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0003690 "double-stranded
            DNA binding" evidence=IEA] [GO:0007623 "circadian rhythm"
            evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0045597 "positive regulation of cell differentiation"
            evidence=IEA] [GO:0051591 "response to cAMP" evidence=IEA]
            [GO:0060041 "retina development in camera-type eye" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=TAS] [GO:0009887 "organ
            morphogenesis" evidence=TAS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0031018 "endocrine pancreas development"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 Reactome:REACT_111045
            GO:GO:0005654 GO:GO:0030154 GO:GO:0042493 GO:GO:0003677
            GO:GO:0007623 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 Orphanet:552
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0009887
            GO:GO:0060041 GO:GO:0003690 MIM:125853 GO:GO:0031018 GO:GO:0051591
            HOVERGEN:HBG009115 HOGENOM:HOG000230939 EMBL:AB008913 EMBL:AF043978
            EMBL:AC073934 EMBL:BC074761 IPI:IPI00011955 IPI:IPI00218426
            IPI:IPI00844339 RefSeq:NP_006184.2 UniGene:Hs.129706
            ProteinModelPortal:O43316 SMR:O43316 STRING:O43316 PRIDE:O43316
            DNASU:5078 Ensembl:ENST00000338516 Ensembl:ENST00000341640
            GeneID:5078 KEGG:hsa:5078 UCSC:uc003vmg.1 UCSC:uc010lld.1 CTD:5078
            GeneCards:GC07M127250 H-InvDB:HIX0033508 HGNC:HGNC:8618
            HPA:HPA006806 HPA:HPA007182 MIM:167413 MIM:222100 MIM:612225
            MIM:612227 neXtProt:NX_O43316 PharmGKB:PA32958 eggNOG:NOG309473
            KO:K08032 GenomeRNAi:5078 NextBio:19588 ArrayExpress:O43316
            Bgee:O43316 CleanEx:HS_PAX4 Genevestigator:O43316 Uniprot:O43316
        Length = 350

 Score = 209 (78.6 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
 Identities = 47/100 (47%), Positives = 61/100 (61%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G+RPC ISR L+VS+GCVSKIL RY  TG + P  IGGSKPR+ATP V  RI + K
Sbjct:    33 LAVSGMRPCDISRILKVSNGCVSKILGRYYRTGVLEPKGIGGSKPRLATPPVVARIAQLK 92

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQ 98
                P + +WE++ +L          T S   I  VL+  Q
Sbjct:    93 GECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLRALQ 132

 Score = 93 (37.8 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
 Identities = 20/44 (45%), Positives = 25/44 (56%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+ +Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   172 RNRTIFSPSQAEALEKEFQRGQYPDSVARGKLATATSLPEDTVR 215


>UNIPROTKB|F1SAU2 [details] [associations]
            symbol:PAX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0061056 "sclerotome
            development" evidence=IEA] [GO:0060349 "bone morphogenesis"
            evidence=IEA] [GO:0060017 "parathyroid gland development"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043374 "CD8-positive,
            alpha-beta T cell differentiation" evidence=IEA] [GO:0043367
            "CD4-positive, alpha-beta T cell differentiation" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            GO:GO:0005634 GO:GO:0003677 GO:GO:0008283 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0001756 GO:GO:0048538 GO:GO:0060349 GO:GO:0060017
            GeneTree:ENSGT00680000099553 GO:GO:0043374 GO:GO:0043367
            OMA:HGLPIPA GO:GO:0061056 EMBL:CU372914 Ensembl:ENSSSCT00000007784
            Uniprot:F1SAU2
        Length = 463

 Score = 285 (105.4 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 57/99 (57%), Positives = 70/99 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:   122 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYK 181

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:   182 QGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 220


>UNIPROTKB|F1N8W6 [details] [associations]
            symbol:PAX9 "Paired box protein Pax-9" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007492
            "endoderm development" evidence=IEA] [GO:0042476 "odontogenesis"
            evidence=IEA] [GO:0042481 "regulation of odontogenesis"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0060325 "face morphogenesis" evidence=IEA] [GO:0071363
            "cellular response to growth factor stimulus" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0007275
            GO:GO:0005739 GO:GO:0005634 GO:GO:0045892 GO:GO:0071363
            GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099553
            GO:GO:0042481 IPI:IPI00821290 OMA:WQHAGST EMBL:AADN02003409
            Ensembl:ENSGALT00000037805 ArrayExpress:F1N8W6 Uniprot:F1N8W6
        Length = 340

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    32 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 91

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    92 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 130


>UNIPROTKB|F1N8W7 [details] [associations]
            symbol:PAX9 "Paired box protein Pax-9" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0042481
            "regulation of odontogenesis" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0060325 "face
            morphogenesis" evidence=IEA] [GO:0071363 "cellular response to
            growth factor stimulus" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0007275
            GO:GO:0005739 GO:GO:0005634 GO:GO:0045892 GO:GO:0071363
            GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099553
            GO:GO:0042481 EMBL:AADN02003409 IPI:IPI00819266
            Ensembl:ENSGALT00000037804 ArrayExpress:F1N8W7 Uniprot:F1N8W7
        Length = 202

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    31 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 90

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    91 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 129


>UNIPROTKB|F1N8X4 [details] [associations]
            symbol:PAX9 "Paired box protein Pax-9" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099553
            EMBL:AADN02003409 IPI:IPI00587889 Ensembl:ENSGALT00000037803
            ArrayExpress:F1N8X4 Uniprot:F1N8X4
        Length = 339

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    30 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 89

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    90 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 128


>UNIPROTKB|P55166 [details] [associations]
            symbol:PAX9 "Paired box protein Pax-9" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 HOVERGEN:HBG009115 eggNOG:NOG252808
            HOGENOM:HOG000230938 EMBL:X92652 IPI:IPI00821290 UniGene:Gga.45
            ProteinModelPortal:P55166 SMR:P55166 STRING:P55166 Uniprot:P55166
        Length = 339

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    30 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 89

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    90 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 128


>UNIPROTKB|Q9PSA1 [details] [associations]
            symbol:Pax-9 "Paired box protein Pax-9" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0007492 "endoderm development"
            evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0042481
            "regulation of odontogenesis" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0060325 "face
            morphogenesis" evidence=IEA] [GO:0071363 "cellular response to
            growth factor stimulus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351
            GO:GO:0007275 GO:GO:0005739 GO:GO:0005634 GO:GO:0045892
            GO:GO:0071363 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099553 GO:GO:0042481 HOVERGEN:HBG009115
            HOGENOM:HOG000230938 HSSP:Q02548 UniGene:Gga.45 OrthoDB:EOG4RBQJV
            EMBL:AADN02003409 EMBL:X82443 IPI:IPI00818035 STRING:Q9PSA1
            Ensembl:ENSGALT00000016445 InParanoid:Q9PSA1 Uniprot:Q9PSA1
        Length = 208

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    30 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 89

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    90 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 128


>UNIPROTKB|F1MFP5 [details] [associations]
            symbol:PAX9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071363 "cellular
            response to growth factor stimulus" evidence=IEA] [GO:0060325 "face
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0042481 "regulation of odontogenesis"
            evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0007492
            "endoderm development" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0005739
            GO:GO:0005634 GO:GO:0045892 GO:GO:0071363 GO:GO:0003677
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0042476 GO:GO:0007492 GO:GO:0060325
            GeneTree:ENSGT00680000099553 GO:GO:0042481 KO:K09382 CTD:5083
            OMA:WQHAGST EMBL:DAAA02052758 IPI:IPI00702322 RefSeq:NP_001179298.1
            UniGene:Bt.67661 Ensembl:ENSBTAT00000012105 GeneID:540196
            KEGG:bta:540196 NextBio:20878482 Uniprot:F1MFP5
        Length = 342

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    32 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 91

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    92 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 130


>UNIPROTKB|F1PXE6 [details] [associations]
            symbol:PAX9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GeneTree:ENSGT00680000099553
            OMA:WQHAGST EMBL:AAEX03005679 Ensembl:ENSCAFT00000021704
            Uniprot:F1PXE6
        Length = 342

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    32 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 91

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    92 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 130


>UNIPROTKB|P55771 [details] [associations]
            symbol:PAX9 "Paired box protein Pax-9" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007492 "endoderm development" evidence=IEA] [GO:0042476
            "odontogenesis" evidence=IEA] [GO:0042481 "regulation of
            odontogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0060325 "face morphogenesis" evidence=IEA] [GO:0071363
            "cellular response to growth factor stimulus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0007275
            "multicellular organismal development" evidence=NAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 GO:GO:0007275 GO:GO:0005739 GO:GO:0005634
            GO:GO:0045892 GO:GO:0071363 GO:GO:0003677 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0042476 GO:GO:0007492 GO:GO:0060325 Orphanet:2227
            Orphanet:99798 GO:GO:0042481 HOVERGEN:HBG009115 eggNOG:NOG252808
            HOGENOM:HOG000230938 KO:K09382 EMBL:AJ238381 EMBL:AJ238382
            EMBL:AJ238383 EMBL:BC001159 EMBL:L09745 EMBL:X92850 IPI:IPI00413469
            PIR:S36155 RefSeq:NP_006185.1 UniGene:Hs.132576 UniGene:Hs.609574
            ProteinModelPortal:P55771 SMR:P55771 STRING:P55771
            PhosphoSite:P55771 DMDM:8247954 PRIDE:P55771 DNASU:5083
            Ensembl:ENST00000361487 Ensembl:ENST00000402703 GeneID:5083
            KEGG:hsa:5083 UCSC:uc001wty.4 CTD:5083 GeneCards:GC14P037126
            HGNC:HGNC:8623 HPA:HPA038462 MIM:167416 MIM:604625
            neXtProt:NX_P55771 PharmGKB:PA32963 InParanoid:P55771 OMA:WQHAGST
            OrthoDB:EOG4RBQJV PhylomeDB:P55771 GenomeRNAi:5083 NextBio:19612
            ArrayExpress:P55771 Bgee:P55771 CleanEx:HS_PAX9
            Genevestigator:P55771 GermOnline:ENSG00000198807 Uniprot:P55771
        Length = 341

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    32 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 91

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    92 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 130


>UNIPROTKB|F1SHK5 [details] [associations]
            symbol:PAX9 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071363 "cellular
            response to growth factor stimulus" evidence=IEA] [GO:0060325 "face
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0042481 "regulation of odontogenesis"
            evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0007492
            "endoderm development" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0005739
            GO:GO:0005634 GO:GO:0045892 GO:GO:0071363 GO:GO:0003677
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0042476 GO:GO:0007492 GO:GO:0060325
            GeneTree:ENSGT00680000099553 GO:GO:0042481 OMA:WQHAGST
            EMBL:CT757474 EMBL:CU367884 Ensembl:ENSSSCT00000002175
            Uniprot:F1SHK5
        Length = 371

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    62 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 121

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:   122 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 160


>MGI|MGI:97493 [details] [associations]
            symbol:Pax9 "paired box gene 9" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription
            factor complex" evidence=TAS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007492
            "endoderm development" evidence=IMP] [GO:0009887 "organ
            morphogenesis" evidence=TAS] [GO:0042476 "odontogenesis"
            evidence=IGI] [GO:0042481 "regulation of odontogenesis"
            evidence=IGI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI]
            [GO:0060325 "face morphogenesis" evidence=IGI] [GO:0071363
            "cellular response to growth factor stimulus" evidence=IDA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 MGI:MGI:97493
            GO:GO:0005739 GO:GO:0045892 GO:GO:0071363 GO:GO:0003677
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0042476
            GO:GO:0007492 GO:GO:0060325 GO:GO:0042481 HOVERGEN:HBG009115
            eggNOG:NOG252808 HOGENOM:HOG000230938 KO:K09382 CTD:5083
            OMA:WQHAGST EMBL:X84000 EMBL:BC005794 EMBL:X73037 IPI:IPI00135720
            PIR:I48740 RefSeq:NP_035171.1 UniGene:Mm.5035
            ProteinModelPortal:P47242 SMR:P47242 IntAct:P47242 STRING:P47242
            PhosphoSite:P47242 PRIDE:P47242 Ensembl:ENSMUST00000001538
            Ensembl:ENSMUST00000153250 GeneID:18511 KEGG:mmu:18511
            InParanoid:P47242 NextBio:294248 Bgee:P47242 CleanEx:MM_PAX9
            Genevestigator:P47242 GermOnline:ENSMUSG00000001497 Uniprot:P47242
        Length = 342

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    32 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 91

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    92 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 130


>RGD|1560838 [details] [associations]
            symbol:Pax9 "paired box 9" species:10116 "Rattus norvegicus"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005739
            "mitochondrion" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007492 "endoderm development"
            evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
            [GO:0042476 "odontogenesis" evidence=IEA;ISO] [GO:0042481
            "regulation of odontogenesis" evidence=IEA;ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0060325
            "face morphogenesis" evidence=IEA;ISO] [GO:0071363 "cellular
            response to growth factor stimulus" evidence=IEA;ISO]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 RGD:1560838
            GO:GO:0005739 GO:GO:0005634 GO:GO:0045892 GO:GO:0071363
            GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0042476 GO:GO:0007492
            GO:GO:0060325 GeneTree:ENSGT00680000099553 GO:GO:0042481
            HOVERGEN:HBG009115 eggNOG:NOG252808 HOGENOM:HOG000230938 KO:K09382
            CTD:5083 OrthoDB:EOG4RBQJV EMBL:AB248957 IPI:IPI00369946
            RefSeq:NP_001034628.1 UniGene:Rn.82416 ProteinModelPortal:Q2L4T2
            SMR:Q2L4T2 STRING:Q2L4T2 PhosphoSite:Q2L4T2 PRIDE:Q2L4T2
            Ensembl:ENSRNOT00000011802 GeneID:362741 KEGG:rno:362741
            UCSC:RGD:1560838 InParanoid:Q2L4T2 NextBio:681085
            Genevestigator:Q2L4T2 GermOnline:ENSRNOG00000008826 Uniprot:Q2L4T2
        Length = 342

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/99 (57%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V K I  YK
Sbjct:    32 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYK 91

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:    92 QRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 130


>UNIPROTKB|F1PB32 [details] [associations]
            symbol:PAX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0061056
            "sclerotome development" evidence=IEA] [GO:0060349 "bone
            morphogenesis" evidence=IEA] [GO:0060017 "parathyroid gland
            development" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0043374
            "CD8-positive, alpha-beta T cell differentiation" evidence=IEA]
            [GO:0043367 "CD4-positive, alpha-beta T cell differentiation"
            evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
            [GO:0001756 "somitogenesis" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 GO:GO:0005634 GO:GO:0003677 GO:GO:0008283
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0001756 GO:GO:0048538 GO:GO:0060349
            GO:GO:0060017 GeneTree:ENSGT00680000099553 GO:GO:0043374
            GO:GO:0043367 OMA:HGLPIPA GO:GO:0061056 EMBL:AAEX03013744
            Ensembl:ENSCAFT00000008330 Uniprot:F1PB32
        Length = 534

 Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 57/99 (57%), Positives = 70/99 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:   117 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYK 176

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:   177 QGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 215


>UNIPROTKB|P15863 [details] [associations]
            symbol:PAX1 "Paired box protein Pax-1" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0043367 "CD4-positive, alpha-beta T cell
            differentiation" evidence=IEA] [GO:0043374 "CD8-positive,
            alpha-beta T cell differentiation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0060017 "parathyroid gland development"
            evidence=IEA] [GO:0060349 "bone morphogenesis" evidence=IEA]
            [GO:0061056 "sclerotome development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=TAS] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 GO:GO:0005634 GO:GO:0003677 GO:GO:0008283
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF46689
            GO:GO:0001756 GO:GO:0006366 GO:GO:0001501 GO:GO:0048538
            GO:GO:0060349 GO:GO:0060017 GO:GO:0043374 GO:GO:0043367
            HOVERGEN:HBG009115 EMBL:AK303335 EMBL:AY740018 EMBL:AL035562
            EMBL:BC069134 EMBL:X15044 IPI:IPI00013473 IPI:IPI00419577
            IPI:IPI00963849 PIR:S06961 RefSeq:NP_006183.2 UniGene:Hs.122310
            ProteinModelPortal:P15863 SMR:P15863 MINT:MINT-202824 STRING:P15863
            PhosphoSite:P15863 DMDM:296439493 PRIDE:P15863
            Ensembl:ENST00000398485 Ensembl:ENST00000444366 GeneID:5075
            KEGG:hsa:5075 UCSC:uc002wsj.2 UCSC:uc010zsm.2 CTD:5075
            GeneCards:GC20P021634 H-InvDB:HIX0040597 HGNC:HGNC:8615 MIM:167411
            neXtProt:NX_P15863 PharmGKB:PA32955 eggNOG:NOG252808
            HOGENOM:HOG000230938 InParanoid:P15863 KO:K09382 OMA:HGLPIPA
            OrthoDB:EOG4W6NW9 ChiTaRS:PAX1 GenomeRNAi:5075 NextBio:19556
            Bgee:P15863 CleanEx:HS_PAX1 Genevestigator:P15863
            GermOnline:ENSG00000125813 GO:GO:0061056 Uniprot:P15863
        Length = 534

 Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 57/99 (57%), Positives = 70/99 (70%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP+V K I +YK
Sbjct:   126 LAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYK 185

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D  +  S   I  +L+ K
Sbjct:   186 QGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 224


>FB|FBgn0003129 [details] [associations]
            symbol:Poxm "Pox meso" species:7227 "Drosophila melanogaster"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007526
            "larval somatic muscle development" evidence=IMP]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 EMBL:AE014297
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689 GO:GO:0007526
            GeneTree:ENSGT00680000099553 eggNOG:NOG252808 KO:K09382
            EMBL:DQ459353 EMBL:DQ459354 EMBL:BT025043 EMBL:X16992 PIR:S06950
            RefSeq:NP_001036687.1 UniGene:Dm.5378 ProteinModelPortal:P23757
            SMR:P23757 DIP:DIP-17081N MINT:MINT-297926 STRING:P23757
            EnsemblMetazoa:FBtr0111026 GeneID:40990 KEGG:dme:Dmel_CG9610
            CTD:40990 FlyBase:FBgn0003129 InParanoid:P23757 OMA:VNYIREL
            OrthoDB:EOG46WWS5 PhylomeDB:P23757 ChiTaRS:Poxm GenomeRNAi:40990
            NextBio:821625 Bgee:P23757 GermOnline:CG9610 Uniprot:P23757
        Length = 370

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 56/99 (56%), Positives = 68/99 (68%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISRQLRVSHGCVSKIL RY ETGSI PG IGGSKPRV TP V   I E K
Sbjct:    37 LARLGIRPCDISRQLRVSHGCVSKILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELK 96

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK 97
             + +P I +WE+RD+L+     D ++  S   I  +L+ K
Sbjct:    97 QRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNK 135


>WB|WBGene00003938 [details] [associations]
            symbol:pax-2 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 eggNOG:NOG326044
            GeneTree:ENSGT00680000099910 HSSP:Q02548 EMBL:FO081260 PIR:T29502
            RefSeq:NP_500513.1 UniGene:Cel.12671 ProteinModelPortal:Q21263
            SMR:Q21263 STRING:Q21263 EnsemblMetazoa:K06B9.5 GeneID:187062
            KEGG:cel:CELE_K06B9.5 UCSC:K06B9.5 CTD:309437 WormBase:K06B9.5
            HOGENOM:HOG000122369 InParanoid:Q21263 NextBio:933962
            Uniprot:Q21263
        Length = 351

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 65/163 (39%), Positives = 93/163 (57%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             M+  G RPC ISRQL+VSHGCVSKIL RY  TGS+RPGVIGGSKP+VATP V + I  YK
Sbjct:   119 MSQHGTRPCDISRQLKVSHGCVSKILGRYYSTGSVRPGVIGGSKPKVATPRVVECIAGYK 178

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRK----QRRSRTTFTSAQLEELE 114
             + NP + +WE+R KLI+     + +  S   I  +++ K    Q  + T+ T +      
Sbjct:   179 RANPTMFAWEIRQKLIEDQICGEENVPSVSSINRIVRNKSFMAQLATPTSVTPSVARPSS 238

Query:   115 KSFQRSHYPDIYTREALANKFGMTETRVQQFVLGTAGFLLSCL 157
              + Q    P    ++ +     + +  +QQF L +A  + S +
Sbjct:   239 ATSQNQRSPPRGVQQHMQQSTSVQQ--LQQFQLTSAATVNSLI 279


>WB|WBGene00001204 [details] [associations]
            symbol:egl-38 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IMP] [GO:0001708 "cell fate
            specification" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040025 "vulval development"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0000977 "RNA polymerase II regulatory region
            sequence-specific DNA binding" evidence=IDA] [GO:0060065 "uterus
            development" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0005634
            GO:GO:0001708 GO:GO:0009792 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            GO:GO:0030163 GO:GO:0045138 GO:GO:0040025 GO:GO:0000977
            GO:GO:0060065 EMBL:Z70718 GeneTree:ENSGT00680000099910 HSSP:Q02548
            EMBL:AF002702 PIR:T18919 RefSeq:NP_501836.1 UniGene:Cel.19652
            ProteinModelPortal:G5ED14 SMR:G5ED14 EnsemblMetazoa:C04G2.7
            GeneID:177876 KEGG:cel:CELE_C04G2.7 CTD:177876 WormBase:C04G2.7
            OMA:HADMSLV NextBio:898760 Uniprot:G5ED14
        Length = 289

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 59/125 (47%), Positives = 77/125 (61%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             M+  G RPC ISRQL+VSHGCVSKIL RY  TGS+RPGVIGGSKP+VATP V + I  YK
Sbjct:    57 MSQHGTRPCDISRQLKVSHGCVSKILGRYYSTGSVRPGVIGGSKPKVATPRVVECIAGYK 116

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTF-TSAQLEELEKSF 117
             + NP + +WE+R KLI+     + +  S   I  +++ K   ++    TS        S 
Sbjct:   117 RANPTMFAWEIRQKLIEDQICGEENVPSVSSINRIVRNKSFMAQLAAPTSVTSSAARPSS 176

Query:   118 QRSHY 122
               SH+
Sbjct:   177 ATSHH 181


>WB|WBGene00003937 [details] [associations]
            symbol:pax-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0007275 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 SUPFAM:SSF46689 EMBL:FO080570
            GeneTree:ENSGT00680000099553 eggNOG:NOG252808 HSSP:Q02548
            PIR:E89124 RefSeq:NP_505120.1 UniGene:Cel.3080
            ProteinModelPortal:Q21272 SMR:Q21272 IntAct:Q21272 STRING:Q21272
            EnsemblMetazoa:K07C11.1 GeneID:187105 KEGG:cel:CELE_K07C11.1
            UCSC:K07C11.1 CTD:187105 WormBase:K07C11.1 InParanoid:Q21272
            OMA:PSYDSYH NextBio:934106 Uniprot:Q21272
        Length = 257

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 55/127 (43%), Positives = 82/127 (64%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             ++  G RPC ISRQL++SHGCVSKIL R+ E G+I PG IGGS+PRV TP V + I   K
Sbjct:    89 LSRQGTRPCDISRQLKISHGCVSKILTRFSENGTIMPGTIGGSRPRVTTPKVVEYIRSLK 148

Query:    61 KTNPNITSWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQRRSRTTFTSAQL----EELE 114
             +++P I +WE+RD+LI     D ++  S   I  +L+ K   + ++ +S+QL    ++L 
Sbjct:   149 RSDPGIFAWEIRDRLISADICDRANLPSVSSISRILRNKNGGNSSSSSSSQLRYIRDQLA 208

Query:   115 KSFQRSH 121
             +  Q+ H
Sbjct:   209 EQQQQQH 215


>FB|FBgn0005561 [details] [associations]
            symbol:sv "shaven" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=NAS] [GO:0042676 "compound
            eye cone cell fate commitment" evidence=TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0048666 "neuron development"
            evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
            [GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0042673
            "regulation of retinal cone cell fate specification"
            evidence=IGI;IMP] [GO:0045676 "regulation of R7 cell
            differentiation" evidence=IGI;IMP] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034
            PROSITE:PS51057 SMART:SM00351 GO:GO:0005634 GO:GO:0003677
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF46689
            GO:GO:0003705 GO:GO:0048813 GO:GO:0007517 EMBL:AE014135
            GO:GO:0042676 eggNOG:NOG326044 GeneTree:ENSGT00680000099553
            KO:K15608 HSSP:Q02548 GO:GO:0045676 GO:GO:0042673 UniGene:Dm.1886
            GeneID:43825 KEGG:dme:Dmel_CG11049 CTD:43825 FlyBase:FBgn0005561
            GenomeRNAi:43825 NextBio:836073 EMBL:AF010256 RefSeq:NP_524633.3
            SMR:O16117 STRING:O16117 EnsemblMetazoa:FBtr0089327 UCSC:CG11049-RA
            InParanoid:O16117 OMA:SACTKSE OrthoDB:EOG4X69RM Uniprot:O16117
        Length = 844

 Score = 272 (100.8 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 51/76 (67%), Positives = 61/76 (80%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  GVRPC ISRQLRVSHGCVSKIL+RY ETGS + GVIGGSKP+VATP V   I  YK
Sbjct:   203 LAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYK 262

Query:    61 KTNPNITSWEVRDKLI 76
             + NP + +WE+RD+L+
Sbjct:   263 RENPTMFAWEIRDRLL 278


>UNIPROTKB|D3ZZT5 [details] [associations]
            symbol:Pax6 "Paired box protein Pax-6" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:3258 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            IPI:IPI00207588 Ensembl:ENSRNOT00000006328 ArrayExpress:D3ZZT5
            Uniprot:D3ZZT5
        Length = 366

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    32 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 91

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:    92 RECPSIFAWEIRDRLL 107

 Score = 173 (66.0 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 52/141 (36%), Positives = 75/141 (53%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E +  
Sbjct:   113 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGQGE 171

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   172 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 220

Query:   123 PDIYTREALANKFGMTETRVQ 143
             PD++ RE LA K  + E R+Q
Sbjct:   221 PDVFARERLAAKIDLPEARIQ 241


>RGD|3258 [details] [associations]
            symbol:Pax6 "paired box 6" species:10116 "Rattus norvegicus"
          [GO:0000790 "nuclear chromatin" evidence=ISO;IDA] [GO:0000979 "RNA
          polymerase II core promoter sequence-specific DNA binding"
          evidence=ISO;IC] [GO:0000981 "sequence-specific DNA binding RNA
          polymerase II transcription factor activity" evidence=ISO;IC]
          [GO:0001568 "blood vessel development" evidence=IEA;ISO] [GO:0001709
          "cell fate determination" evidence=IEA;ISO] [GO:0001764 "neuron
          migration" evidence=ISO;IMP] [GO:0002052 "positive regulation of
          neuroblast proliferation" evidence=IEA;ISO] [GO:0002088 "lens
          development in camera-type eye" evidence=IEA;ISO] [GO:0003322
          "pancreatic A cell development" evidence=ISO;IMP] [GO:0003677 "DNA
          binding" evidence=IEA;ISO] [GO:0003680 "AT DNA binding" evidence=IDA]
          [GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=ISO;TAS] [GO:0004842 "ubiquitin-protein ligase activity"
          evidence=ISS] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
          "nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm"
          evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
          evidence=IEA] [GO:0006355 "regulation of transcription,
          DNA-dependent" evidence=IEA] [GO:0006357 "regulation of transcription
          from RNA polymerase II promoter" evidence=ISO] [GO:0006366
          "transcription from RNA polymerase II promoter" evidence=ISO;IMP]
          [GO:0007224 "smoothened signaling pathway" evidence=IEA;ISO]
          [GO:0007275 "multicellular organismal development" evidence=IEA]
          [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
          evidence=IEA;ISO] [GO:0007417 "central nervous system development"
          evidence=IEP] [GO:0007420 "brain development" evidence=ISO;IMP]
          [GO:0007435 "salivary gland morphogenesis" evidence=IEA;ISO]
          [GO:0008134 "transcription factor binding" evidence=IEA;ISO]
          [GO:0008285 "negative regulation of cell proliferation" evidence=ISO]
          [GO:0009611 "response to wounding" evidence=IEA;ISO] [GO:0009950
          "dorsal/ventral axis specification" evidence=IEA;ISO] [GO:0009952
          "anterior/posterior pattern specification" evidence=ISO] [GO:0009953
          "dorsal/ventral pattern formation" evidence=ISO] [GO:0010468
          "regulation of gene expression" evidence=ISO] [GO:0010628 "positive
          regulation of gene expression" evidence=ISO;IMP] [GO:0016567 "protein
          ubiquitination" evidence=ISS] [GO:0019901 "protein kinase binding"
          evidence=IEA;ISO] [GO:0021543 "pallium development" evidence=ISO]
          [GO:0021778 "oligodendrocyte cell fate specification"
          evidence=IEA;ISO] [GO:0021796 "cerebral cortex regionalization"
          evidence=IEA;ISO] [GO:0021797 "forebrain anterior/posterior pattern
          specification" evidence=IEA;ISO] [GO:0021798 "forebrain
          dorsal/ventral pattern formation" evidence=IEA;ISO] [GO:0021902
          "commitment of neuronal cell to specific neuron type in forebrain"
          evidence=IEA;ISO] [GO:0021905 "forebrain-midbrain boundary formation"
          evidence=IEA;ISO] [GO:0021912 "regulation of transcription from RNA
          polymerase II promoter involved in spinal cord motor neuron fate
          specification" evidence=IEA;ISO] [GO:0021913 "regulation of
          transcription from RNA polymerase II promoter involved in ventral
          spinal cord interneuron specification" evidence=IEA;ISO] [GO:0021918
          "regulation of transcription from RNA polymerase II promoter involved
          in somatic motor neuron fate commitment" evidence=IEA;ISO]
          [GO:0021983 "pituitary gland development" evidence=IEA;ISO]
          [GO:0023019 "signal transduction involved in regulation of gene
          expression" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
          evidence=ISO] [GO:0030216 "keratinocyte differentiation"
          evidence=IEA;ISO] [GO:0030334 "regulation of cell migration"
          evidence=IEA;ISO] [GO:0030858 "positive regulation of epithelial cell
          differentiation" evidence=IEA;ISO] [GO:0030900 "forebrain
          development" evidence=ISO] [GO:0030902 "hindbrain development"
          evidence=IDA] [GO:0031625 "ubiquitin protein ligase binding"
          evidence=IEA;ISO] [GO:0032808 "lacrimal gland development"
          evidence=IEA;ISO] [GO:0033365 "protein localization to organelle"
          evidence=IEA;ISO] [GO:0035035 "histone acetyltransferase binding"
          evidence=IEA;ISO] [GO:0042462 "eye photoreceptor cell development"
          evidence=IEA;ISO] [GO:0042593 "glucose homeostasis" evidence=IEA;ISO]
          [GO:0042660 "positive regulation of cell fate specification"
          evidence=IMP] [GO:0043010 "camera-type eye development" evidence=ISO]
          [GO:0043565 "sequence-specific DNA binding" evidence=RCA;IDA]
          [GO:0044212 "transcription regulatory region DNA binding"
          evidence=ISO] [GO:0044424 "intracellular part" evidence=ISO]
          [GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045664
          "regulation of neuron differentiation" evidence=IDA] [GO:0045665
          "negative regulation of neuron differentiation" evidence=IEA;ISO]
          [GO:0045893 "positive regulation of transcription, DNA-dependent"
          evidence=ISO;IC] [GO:0045944 "positive regulation of transcription
          from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048505
          "regulation of timing of cell differentiation" evidence=IEA;ISO]
          [GO:0048596 "embryonic camera-type eye morphogenesis"
          evidence=IEA;ISO] [GO:0048708 "astrocyte differentiation"
          evidence=IEA;ISO] [GO:0050678 "regulation of epithelial cell
          proliferation" evidence=IMP] [GO:0050680 "negative regulation of
          epithelial cell proliferation" evidence=IEA;ISO] [GO:0050767
          "regulation of neurogenesis" evidence=ISO;IMP] [GO:0050768 "negative
          regulation of neurogenesis" evidence=ISS] [GO:0061072 "iris
          morphogenesis" evidence=IEA;ISO] [GO:0061303 "cornea development in
          camera-type eye" evidence=IEA;ISO] [GO:0070410 "co-SMAD binding"
          evidence=IEA;ISO] [GO:0070412 "R-SMAD binding" evidence=IEA;ISO]
          [GO:0071837 "HMG box domain binding" evidence=IEA;ISO] [GO:0005730
          "nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR001523
          InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
          PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
          PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:3258 GO:GO:0001764
          GO:GO:0045893 GO:GO:0045664 Gene3D:1.10.10.10 InterPro:IPR011991
          Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0000981
          GO:GO:0003690 GO:GO:0030902 GO:GO:0004842 GO:GO:0000979 GO:GO:0050768
          GO:GO:0003680 GO:GO:0050678 GO:GO:0042660 eggNOG:NOG326044
          GeneTree:ENSGT00680000099553 HOVERGEN:HBG009115 CTD:5080 KO:K08031
          GO:GO:0003322 EMBL:U69644 EMBL:AY540905 EMBL:AY540906 EMBL:AJ627631
          EMBL:BC128741 EMBL:S74393 IPI:IPI00231698 IPI:IPI00464480 PIR:S36166
          RefSeq:NP_037133.1 UniGene:Rn.89724 ProteinModelPortal:P63016
          SMR:P63016 STRING:P63016 Ensembl:ENSRNOT00000005882
          Ensembl:ENSRNOT00000006302 GeneID:25509 KEGG:rno:25509 UCSC:RGD:3258
          NextBio:606937 ArrayExpress:P63016 Genevestigator:P63016
          GermOnline:ENSRNOG00000004410 Uniprot:P63016
        Length = 422

 Score = 261 (96.9 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    32 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 91

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:    92 RECPSIFAWEIRDRLL 107

 Score = 173 (66.0 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 52/141 (36%), Positives = 75/141 (53%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E +  
Sbjct:   127 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGQGE 185

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   186 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 234

Query:   123 PDIYTREALANKFGMTETRVQ 143
             PD++ RE LA K  + E R+Q
Sbjct:   235 PDVFARERLAAKIDLPEARIQ 255


>UNIPROTKB|Q1LZF1 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9913 "Bos
            taurus" [GO:0016567 "protein ubiquitination" evidence=ISS]
            [GO:0050768 "negative regulation of neurogenesis" evidence=ISS]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0070412
            "R-SMAD binding" evidence=IEA] [GO:0070410 "co-SMAD binding"
            evidence=IEA] [GO:0061303 "cornea development in camera-type eye"
            evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
            [GO:0050680 "negative regulation of epithelial cell proliferation"
            evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
            [GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA]
            [GO:0048505 "regulation of timing of cell differentiation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IEA]
            [GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0042462 "eye
            photoreceptor cell development" evidence=IEA] [GO:0035035 "histone
            acetyltransferase binding" evidence=IEA] [GO:0033365 "protein
            localization to organelle" evidence=IEA] [GO:0032808 "lacrimal
            gland development" evidence=IEA] [GO:0031625 "ubiquitin protein
            ligase binding" evidence=IEA] [GO:0030858 "positive regulation of
            epithelial cell differentiation" evidence=IEA] [GO:0030334
            "regulation of cell migration" evidence=IEA] [GO:0030216
            "keratinocyte differentiation" evidence=IEA] [GO:0023019 "signal
            transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0021983 "pituitary gland development"
            evidence=IEA] [GO:0021918 "regulation of transcription from RNA
            polymerase II promoter involved in somatic motor neuron fate
            commitment" evidence=IEA] [GO:0021913 "regulation of transcription
            from RNA polymerase II promoter involved in ventral spinal cord
            interneuron specification" evidence=IEA] [GO:0021912 "regulation of
            transcription from RNA polymerase II promoter involved in spinal
            cord motor neuron fate specification" evidence=IEA] [GO:0021905
            "forebrain-midbrain boundary formation" evidence=IEA] [GO:0021902
            "commitment of neuronal cell to specific neuron type in forebrain"
            evidence=IEA] [GO:0021798 "forebrain dorsal/ventral pattern
            formation" evidence=IEA] [GO:0021797 "forebrain anterior/posterior
            pattern specification" evidence=IEA] [GO:0021796 "cerebral cortex
            regionalization" evidence=IEA] [GO:0021778 "oligodendrocyte cell
            fate specification" evidence=IEA] [GO:0019901 "protein kinase
            binding" evidence=IEA] [GO:0009950 "dorsal/ventral axis
            specification" evidence=IEA] [GO:0009611 "response to wounding"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0007435 "salivary gland morphogenesis"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0003322 "pancreatic A cell
            development" evidence=IEA] [GO:0002088 "lens development in
            camera-type eye" evidence=IEA] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IEA] [GO:0001764 "neuron
            migration" evidence=IEA] [GO:0001709 "cell fate determination"
            evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
            [GO:0000981 "sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0005737 GO:GO:0007411
            GO:GO:0001764 GO:GO:0030216 GO:GO:0009611 GO:GO:0007435
            GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
            GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0001568
            GO:GO:0004842 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
            GO:GO:0061303 GO:GO:0030858 GO:GO:0007224 GO:GO:0050768
            GO:GO:0001709 GO:GO:0002052 GO:GO:0009950 GO:GO:0021797
            GO:GO:0048596 GO:GO:0023019 GO:GO:0002088 GO:GO:0042462
            GO:GO:0021796 GO:GO:0021913 GO:GO:0032808 GO:GO:0021798
            GO:GO:0048505 GO:GO:0021905 eggNOG:NOG326044
            GeneTree:ENSGT00680000099553 GO:GO:0048708 GO:GO:0061072
            GO:GO:0021912 HOVERGEN:HBG009115 HOGENOM:HOG000230939 EMBL:BC116038
            IPI:IPI00686718 RefSeq:NP_001035735.1 UniGene:Bt.11759
            ProteinModelPortal:Q1LZF1 SMR:Q1LZF1 STRING:Q1LZF1 PRIDE:Q1LZF1
            Ensembl:ENSBTAT00000005994 GeneID:286857 KEGG:bta:286857 CTD:5080
            InParanoid:Q1LZF1 KO:K08031 OMA:NGQTGTW OrthoDB:EOG47PX63
            NextBio:20806506 ArrayExpress:Q1LZF1 GO:GO:0021902 GO:GO:0021778
            GO:GO:0003322 GO:GO:0021918 Uniprot:Q1LZF1
        Length = 422

 Score = 261 (96.9 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    32 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 91

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:    92 RECPSIFAWEIRDRLL 107

 Score = 170 (64.9 bits), Expect = 4.1e-12, P = 4.1e-12
 Identities = 52/141 (36%), Positives = 74/141 (52%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E    
Sbjct:   127 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGGGE 185

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   186 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 234

Query:   123 PDIYTREALANKFGMTETRVQ 143
             PD++ RE LA K  + E R+Q
Sbjct:   235 PDVFARERLAAKIDLPEARIQ 255


>UNIPROTKB|P26367 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
            sapiens" [GO:0001709 "cell fate determination" evidence=IEA]
            [GO:0001764 "neuron migration" evidence=IEA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IEA] [GO:0002088
            "lens development in camera-type eye" evidence=IEA] [GO:0003680 "AT
            DNA binding" evidence=IEA] [GO:0003690 "double-stranded DNA
            binding" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
            "salivary gland morphogenesis" evidence=IEA] [GO:0009950
            "dorsal/ventral axis specification" evidence=IEA] [GO:0021778
            "oligodendrocyte cell fate specification" evidence=IEA] [GO:0021796
            "cerebral cortex regionalization" evidence=IEA] [GO:0021797
            "forebrain anterior/posterior pattern specification" evidence=IEA]
            [GO:0021798 "forebrain dorsal/ventral pattern formation"
            evidence=IEA] [GO:0021902 "commitment of neuronal cell to specific
            neuron type in forebrain" evidence=IEA] [GO:0021905
            "forebrain-midbrain boundary formation" evidence=IEA] [GO:0021912
            "regulation of transcription from RNA polymerase II promoter
            involved in spinal cord motor neuron fate specification"
            evidence=IEA] [GO:0021913 "regulation of transcription from RNA
            polymerase II promoter involved in ventral spinal cord interneuron
            specification" evidence=IEA] [GO:0021918 "regulation of
            transcription from RNA polymerase II promoter involved in somatic
            motor neuron fate commitment" evidence=IEA] [GO:0021983 "pituitary
            gland development" evidence=IEA] [GO:0023019 "signal transduction
            involved in regulation of gene expression" evidence=IEA]
            [GO:0030216 "keratinocyte differentiation" evidence=IEA]
            [GO:0030334 "regulation of cell migration" evidence=IEA]
            [GO:0030858 "positive regulation of epithelial cell
            differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0032808 "lacrimal gland development"
            evidence=IEA] [GO:0033365 "protein localization to organelle"
            evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
            evidence=IEA] [GO:0042660 "positive regulation of cell fate
            specification" evidence=IEA] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=IEA] [GO:0048505 "regulation of
            timing of cell differentiation" evidence=IEA] [GO:0048596
            "embryonic camera-type eye morphogenesis" evidence=IEA] [GO:0048708
            "astrocyte differentiation" evidence=IEA] [GO:0050680 "negative
            regulation of epithelial cell proliferation" evidence=IEA]
            [GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0042593 "glucose homeostasis"
            evidence=IMP] [GO:0061072 "iris morphogenesis" evidence=IMP]
            [GO:0061303 "cornea development in camera-type eye" evidence=IMP]
            [GO:0001568 "blood vessel development" evidence=IMP] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
            [GO:0050768 "negative regulation of neurogenesis" evidence=ISS]
            [GO:0048663 "neuron fate commitment" evidence=NAS] [GO:0009611
            "response to wounding" evidence=IEP] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=TAS]
            [GO:0007601 "visual perception" evidence=TAS] [GO:0003677 "DNA
            binding" evidence=TAS] [GO:0009887 "organ morphogenesis"
            evidence=TAS] [GO:0007417 "central nervous system development"
            evidence=TAS] [GO:0001654 "eye development" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0070412 "R-SMAD
            binding" evidence=IPI] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0000790 "nuclear
            chromatin" evidence=IDA] [GO:0000981 "sequence-specific DNA binding
            RNA polymerase II transcription factor activity" evidence=IDA]
            [GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
            binding" evidence=IDA] [GO:0003322 "pancreatic A cell development"
            evidence=IMP] [GO:0010628 "positive regulation of gene expression"
            evidence=IMP] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0008134 "transcription factor binding" evidence=ISS]
            [GO:0019901 "protein kinase binding" evidence=ISS] [GO:0035035
            "histone acetyltransferase binding" evidence=ISS] [GO:0016567
            "protein ubiquitination" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005737
            GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0019901
            GO:GO:0009611 GO:GO:0007435 GO:GO:0007601 GO:GO:0045944
            GO:GO:0045665 GO:GO:0007417 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 Orphanet:194 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0030334 GO:GO:0000790 GO:GO:0000981 GO:GO:0033365
            GO:GO:0001568 GO:GO:0004842 GO:GO:0008134 GO:GO:0021983
            GO:GO:0050680 GO:GO:0000979 GO:GO:0061303 GO:GO:0035035
            GO:GO:0030858 GO:GO:0007224 GO:GO:0050768 GO:GO:0001709
            GO:GO:0002052 GO:GO:0048663 GO:GO:0009950 GO:GO:0021797
            Orphanet:893 GO:GO:0048596 GO:GO:0023019 GO:GO:0002088
            GO:GO:0042462 MIM:604229 Orphanet:708 EMBL:Z83307 GO:GO:0021796
            GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
            GO:GO:0021905 eggNOG:NOG326044 GO:GO:0048708 GO:GO:0061072
            GO:GO:0021912 HOVERGEN:HBG009115 CTD:5080 KO:K08031 OMA:NGQTGTW
            OrthoDB:EOG47PX63 GO:GO:0021902 GO:GO:0021778 GO:GO:0003322
            GO:GO:0021918 EMBL:M77844 EMBL:M93650 EMBL:AY047583 EMBL:BX640762
            EMBL:Z95332 EMBL:BC011953 IPI:IPI00218800 IPI:IPI00449071
            PIR:A56674 RefSeq:NP_000271.1 RefSeq:NP_001121084.1
            RefSeq:NP_001245391.1 RefSeq:NP_001245392.1 RefSeq:NP_001245393.1
            RefSeq:NP_001245394.1 RefSeq:NP_001595.2 UniGene:Hs.270303
            UniGene:Hs.611376 PDB:2CUE PDB:6PAX PDBsum:2CUE PDBsum:6PAX
            ProteinModelPortal:P26367 SMR:P26367 IntAct:P26367
            MINT:MINT-1465118 STRING:P26367 PhosphoSite:P26367 DMDM:6174889
            PRIDE:P26367 DNASU:5080 Ensembl:ENST00000241001
            Ensembl:ENST00000379107 Ensembl:ENST00000379109
            Ensembl:ENST00000379111 Ensembl:ENST00000379115
            Ensembl:ENST00000379123 Ensembl:ENST00000379129
            Ensembl:ENST00000379132 Ensembl:ENST00000419022 GeneID:5080
            KEGG:hsa:5080 UCSC:uc001mtd.4 GeneCards:GC11M031806 HGNC:HGNC:8620
            HPA:CAB034143 HPA:HPA030775 MIM:106210 MIM:120200 MIM:120430
            MIM:136520 MIM:148190 MIM:165550 MIM:206700 MIM:607108
            neXtProt:NX_P26367 Orphanet:1065 Orphanet:2334 Orphanet:2253
            Orphanet:250923 Orphanet:137902 Orphanet:35737 PharmGKB:PA32960
            EvolutionaryTrace:P26367 GenomeRNAi:5080 NextBio:19596
            ArrayExpress:P26367 Bgee:P26367 CleanEx:HS_PAX6
            Genevestigator:P26367 GermOnline:ENSG00000007372 Uniprot:P26367
        Length = 422

 Score = 261 (96.9 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    32 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 91

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:    92 RECPSIFAWEIRDRLL 107

 Score = 170 (64.9 bits), Expect = 4.1e-12, P = 4.1e-12
 Identities = 52/141 (36%), Positives = 74/141 (52%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E    
Sbjct:   127 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGGGE 185

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   186 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 234

Query:   123 PDIYTREALANKFGMTETRVQ 143
             PD++ RE LA K  + E R+Q
Sbjct:   235 PDVFARERLAAKIDLPEARIQ 255


>UNIPROTKB|F2Z5M7 [details] [associations]
            symbol:PAX6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
            [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410 "co-SMAD
            binding" evidence=IEA] [GO:0061303 "cornea development in
            camera-type eye" evidence=IEA] [GO:0061072 "iris morphogenesis"
            evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
            proliferation" evidence=IEA] [GO:0048708 "astrocyte
            differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
            eye morphogenesis" evidence=IEA] [GO:0048505 "regulation of timing
            of cell differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0042593 "glucose homeostasis"
            evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
            evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
            evidence=IEA] [GO:0033365 "protein localization to organelle"
            evidence=IEA] [GO:0032808 "lacrimal gland development"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
            differentiation" evidence=IEA] [GO:0030334 "regulation of cell
            migration" evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0023019 "signal transduction involved in
            regulation of gene expression" evidence=IEA] [GO:0021983 "pituitary
            gland development" evidence=IEA] [GO:0021918 "regulation of
            transcription from RNA polymerase II promoter involved in somatic
            motor neuron fate commitment" evidence=IEA] [GO:0021913 "regulation
            of transcription from RNA polymerase II promoter involved in
            ventral spinal cord interneuron specification" evidence=IEA]
            [GO:0021912 "regulation of transcription from RNA polymerase II
            promoter involved in spinal cord motor neuron fate specification"
            evidence=IEA] [GO:0021905 "forebrain-midbrain boundary formation"
            evidence=IEA] [GO:0021902 "commitment of neuronal cell to specific
            neuron type in forebrain" evidence=IEA] [GO:0021798 "forebrain
            dorsal/ventral pattern formation" evidence=IEA] [GO:0021797
            "forebrain anterior/posterior pattern specification" evidence=IEA]
            [GO:0021796 "cerebral cortex regionalization" evidence=IEA]
            [GO:0021778 "oligodendrocyte cell fate specification" evidence=IEA]
            [GO:0019901 "protein kinase binding" evidence=IEA] [GO:0009950
            "dorsal/ventral axis specification" evidence=IEA] [GO:0009611
            "response to wounding" evidence=IEA] [GO:0008134 "transcription
            factor binding" evidence=IEA] [GO:0007435 "salivary gland
            morphogenesis" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003322
            "pancreatic A cell development" evidence=IEA] [GO:0002088 "lens
            development in camera-type eye" evidence=IEA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IEA] [GO:0001764
            "neuron migration" evidence=IEA] [GO:0001709 "cell fate
            determination" evidence=IEA] [GO:0001568 "blood vessel development"
            evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
            polymerase II transcription factor activity" evidence=IEA]
            [GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
            binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005737
            GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0009611
            GO:GO:0007435 GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0030334 GO:GO:0000790 GO:GO:0000981 GO:GO:0033365
            GO:GO:0001568 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
            GO:GO:0061303 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
            GO:GO:0002052 GO:GO:0009950 GO:GO:0021797 GO:GO:0048596
            GO:GO:0023019 GO:GO:0002088 GO:GO:0042462 GO:GO:0021796
            GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
            GO:GO:0021905 GeneTree:ENSGT00680000099553 GO:GO:0048708
            GO:GO:0061072 GO:GO:0021912 CTD:5080 KO:K08031 OMA:NGQTGTW
            GO:GO:0021902 GO:GO:0021778 GO:GO:0003322 GO:GO:0021918
            EMBL:CU463938 RefSeq:NP_001231101.1 RefSeq:NP_001231102.1
            UniGene:Ssc.33027 ProteinModelPortal:F2Z5M7 SMR:F2Z5M7
            Ensembl:ENSSSCT00000014546 GeneID:100514152 KEGG:ssc:100514152
            Uniprot:F2Z5M7
        Length = 422

 Score = 261 (96.9 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    32 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 91

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:    92 RECPSIFAWEIRDRLL 107

 Score = 170 (64.9 bits), Expect = 4.1e-12, P = 4.1e-12
 Identities = 52/141 (36%), Positives = 74/141 (52%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E    
Sbjct:   127 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGGGE 185

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   186 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 234

Query:   123 PDIYTREALANKFGMTETRVQ 143
             PD++ RE LA K  + E R+Q
Sbjct:   235 PDVFARERLAAKIDLPEARIQ 255


>MGI|MGI:97490 [details] [associations]
            symbol:Pax6 "paired box gene 6" species:10090 "Mus musculus"
            [GO:0000790 "nuclear chromatin" evidence=ISO;IDA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0000981 "sequence-specific DNA binding RNA
            polymerase II transcription factor activity" evidence=ISO;IDA]
            [GO:0001568 "blood vessel development" evidence=ISO] [GO:0001709
            "cell fate determination" evidence=IMP] [GO:0001764 "neuron
            migration" evidence=ISO;IMP] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IMP] [GO:0002088 "lens
            development in camera-type eye" evidence=IMP] [GO:0003322
            "pancreatic A cell development" evidence=ISO;IMP] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0003680 "AT DNA binding" evidence=ISO]
            [GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=ISO;IMP] [GO:0007224 "smoothened
            signaling pathway" evidence=IDA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007409 "axonogenesis"
            evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007420
            "brain development" evidence=ISO;IMP] [GO:0007435 "salivary gland
            morphogenesis" evidence=IMP] [GO:0008134 "transcription factor
            binding" evidence=IPI] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IMP] [GO:0009950 "dorsal/ventral axis
            specification" evidence=IMP] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IGI;IMP] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IMP] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0010628 "positive
            regulation of gene expression" evidence=ISO;IMP] [GO:0019901
            "protein kinase binding" evidence=IPI] [GO:0021543 "pallium
            development" evidence=IMP] [GO:0021778 "oligodendrocyte cell fate
            specification" evidence=IMP] [GO:0021796 "cerebral cortex
            regionalization" evidence=IMP] [GO:0021797 "forebrain
            anterior/posterior pattern specification" evidence=IMP] [GO:0021798
            "forebrain dorsal/ventral pattern formation" evidence=IMP]
            [GO:0021902 "commitment of neuronal cell to specific neuron type in
            forebrain" evidence=IMP] [GO:0021905 "forebrain-midbrain boundary
            formation" evidence=IMP] [GO:0021912 "regulation of transcription
            from RNA polymerase II promoter involved in spinal cord motor
            neuron fate specification" evidence=IMP] [GO:0021913 "regulation of
            transcription from RNA polymerase II promoter involved in ventral
            spinal cord interneuron specification" evidence=IMP] [GO:0021918
            "regulation of transcription from RNA polymerase II promoter
            involved in somatic motor neuron fate commitment" evidence=IMP]
            [GO:0021983 "pituitary gland development" evidence=IMP] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IDA] [GO:0030154 "cell differentiation" evidence=IMP]
            [GO:0030216 "keratinocyte differentiation" evidence=IMP]
            [GO:0030334 "regulation of cell migration" evidence=IMP]
            [GO:0030858 "positive regulation of epithelial cell
            differentiation" evidence=IMP] [GO:0030900 "forebrain development"
            evidence=IMP] [GO:0030902 "hindbrain development" evidence=ISO]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
            [GO:0032808 "lacrimal gland development" evidence=IMP] [GO:0033365
            "protein localization to organelle" evidence=IMP] [GO:0035035
            "histone acetyltransferase binding" evidence=IDA] [GO:0042462 "eye
            photoreceptor cell development" evidence=IMP] [GO:0042593 "glucose
            homeostasis" evidence=ISO] [GO:0042660 "positive regulation of cell
            fate specification" evidence=ISO] [GO:0043010 "camera-type eye
            development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO] [GO:0044212 "transcription regulatory region
            DNA binding" evidence=IDA] [GO:0044424 "intracellular part"
            evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI;IMP]
            [GO:0045664 "regulation of neuron differentiation" evidence=ISO]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IGI] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0048505 "regulation of timing of cell differentiation"
            evidence=IMP] [GO:0048596 "embryonic camera-type eye morphogenesis"
            evidence=IGI] [GO:0048708 "astrocyte differentiation" evidence=IMP]
            [GO:0050678 "regulation of epithelial cell proliferation"
            evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
            proliferation" evidence=IMP] [GO:0050767 "regulation of
            neurogenesis" evidence=ISO;IMP] [GO:0061072 "iris morphogenesis"
            evidence=ISO] [GO:0061303 "cornea development in camera-type eye"
            evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=IDA]
            [GO:0070412 "R-SMAD binding" evidence=ISO;IDA] [GO:0071837 "HMG box
            domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97490
            GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0030216
            GO:GO:0009611 GO:GO:0007435 GO:GO:0045944 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030334
            GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0001568
            GO:GO:0021983 GO:GO:0050680 GO:GO:0000979 GO:GO:0061303
            GO:GO:0035035 GO:GO:0030858 GO:GO:0007224 GO:GO:0070412
            GO:GO:0001709 GO:GO:0002052 GO:GO:0009950 GO:GO:0021797
            GO:GO:0048596 GO:GO:0023019 GO:GO:0002088 GO:GO:0042462
            UniGene:Mm.33870 GO:GO:0021796 GO:GO:0021913 GO:GO:0032808
            GO:GO:0021798 GO:GO:0048505 GO:GO:0021905 GO:GO:0070410
            eggNOG:NOG326044 GeneTree:ENSGT00680000099553 GO:GO:0048708
            GO:GO:0061072 GO:GO:0021912 HOVERGEN:HBG009115 CTD:5080 KO:K08031
            OMA:NGQTGTW GO:GO:0021902 GO:GO:0021778 GO:GO:0003322 GO:GO:0021918
            EMBL:X63963 EMBL:Y19196 EMBL:Y19199 EMBL:AK028059 EMBL:BC011272
            EMBL:BC036957 EMBL:M77842 IPI:IPI00118638 IPI:IPI00459261
            PIR:S42234 RefSeq:NP_001231127.1 RefSeq:NP_001231129.1
            RefSeq:NP_001231130.1 RefSeq:NP_001231131.1 RefSeq:NP_038655.1
            UniGene:Mm.3608 UniGene:Mm.487124 ProteinModelPortal:P63015
            SMR:P63015 IntAct:P63015 MINT:MINT-1782085 STRING:P63015
            PhosphoSite:P63015 PRIDE:P63015 Ensembl:ENSMUST00000090391
            Ensembl:ENSMUST00000090397 Ensembl:ENSMUST00000111082
            Ensembl:ENSMUST00000111083 Ensembl:ENSMUST00000111084
            Ensembl:ENSMUST00000111085 Ensembl:ENSMUST00000111086
            Ensembl:ENSMUST00000111087 Ensembl:ENSMUST00000167211 GeneID:18508
            KEGG:mmu:18508 NextBio:294236 Bgee:P63015 CleanEx:MM_PAX6
            Genevestigator:P63015 GermOnline:ENSMUSG00000027168 Uniprot:P63015
        Length = 422

 Score = 261 (96.9 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:    32 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 91

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:    92 RECPSIFAWEIRDRLL 107

 Score = 170 (64.9 bits), Expect = 4.1e-12, P = 4.1e-12
 Identities = 52/141 (36%), Positives = 74/141 (52%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E    
Sbjct:   127 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGGGE 185

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   186 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 234

Query:   123 PDIYTREALANKFGMTETRVQ 143
             PD++ RE LA K  + E R+Q
Sbjct:   235 PDVFARERLAAKIDLPEARIQ 255


>FB|FBgn0005558 [details] [associations]
            symbol:ey "eyeless" species:7227 "Drosophila melanogaster"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS;TAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0005667
            "transcription factor complex" evidence=ISS] [GO:0005634 "nucleus"
            evidence=NAS;TAS] [GO:0007455 "eye-antennal disc morphogenesis"
            evidence=TAS] [GO:0016319 "mushroom body development"
            evidence=IEP;IMP] [GO:0048749 "compound eye development"
            evidence=IMP;NAS;TAS] [GO:0001745 "compound eye morphogenesis"
            evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
            [GO:0007420 "brain development" evidence=IMP] [GO:0008347 "glial
            cell migration" evidence=IMP] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0043704 "photoreceptor cell fate specification" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IMP]
            [GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043567
            "regulation of insulin-like growth factor receptor signaling
            pathway" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0048036 "central
            complex development" evidence=IMP] [GO:0048854 "brain
            morphogenesis" evidence=IMP] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0040018 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705
            GO:GO:0016319 EMBL:AE014135 GO:GO:0008347 GO:GO:0007628
            GO:GO:0007455 GO:GO:0048854 GO:GO:0001745 GO:GO:0043567
            eggNOG:NOG326044 GO:GO:0048036 EMBL:X79492 EMBL:X79493
            EMBL:AF433696 EMBL:AF433697 EMBL:AF433698 EMBL:AF433699
            EMBL:AF433700 EMBL:AF433701 EMBL:AF433702 EMBL:AF433703
            EMBL:AF433704 EMBL:AF433705 PIR:I45557 RefSeq:NP_524628.2
            RefSeq:NP_726607.1 UniGene:Dm.6503 ProteinModelPortal:O18381
            SMR:O18381 DIP:DIP-46285N IntAct:O18381 MINT:MINT-320712
            STRING:O18381 GeneID:43812 KEGG:dme:Dmel_CG1464 UCSC:CG1464-RA
            CTD:43812 FlyBase:FBgn0005558 InParanoid:O18381 OrthoDB:EOG4GB5N6
            GenomeRNAi:43812 NextBio:836011 Bgee:O18381 GermOnline:CG1464
            GO:GO:0043704 Uniprot:O18381
        Length = 857

 Score = 256 (95.2 bits), Expect = 8.4e-21, P = 8.4e-21
 Identities = 55/108 (50%), Positives = 75/108 (69%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSKPRVAT +V  +I +YK
Sbjct:    84 LAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYK 143

Query:    61 KTNPNITSWEVRDKLIK--VSRLDDSDTESEPGIVLKR--KQRRSRTT 104
             +  P+I +WE+RD+L++  V   D+  + S    VL+    Q+  ++T
Sbjct:   144 RECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQST 191

 Score = 175 (66.7 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query:    47 VATPDVEKRIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFT 106
             VAT D+  + E     +    S E  +     S + +++ + +  ++LKRK +R+RT+FT
Sbjct:   380 VATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTE-DDQARLILKRKLQRNRTSFT 438

Query:   107 SAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             + Q++ LEK F+R+HYPD++ RE LA K G+ E R+Q
Sbjct:   439 NDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQ 475


>FB|FBgn0003130 [details] [associations]
            symbol:Poxn "Pox neuro" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0007399 "nervous
            system development" evidence=NAS] [GO:0007423 "sensory organ
            development" evidence=IMP;NAS] [GO:0048800 "antennal morphogenesis"
            evidence=IMP] [GO:0007476 "imaginal disc-derived wing
            morphogenesis" evidence=IMP] [GO:0007480 "imaginal disc-derived leg
            morphogenesis" evidence=IMP] [GO:0008049 "male courtship behavior"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008343
            "adult feeding behavior" evidence=IMP] [GO:0009415 "response to
            water stimulus" evidence=IDA] InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS51057
            SMART:SM00351 EMBL:AE013599 GO:GO:0005634 GO:GO:0007399
            GO:GO:0030154 GO:GO:0006355 GO:GO:0007423 GO:GO:0003677
            GO:GO:0008343 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GO:GO:0008049 GO:GO:0007480 GO:GO:0007476
            GO:GO:0009415 GO:GO:0048800 GeneTree:ENSGT00680000099910
            EMBL:M86927 EMBL:X58917 PIR:A38153 RefSeq:NP_476686.1
            UniGene:Dm.4653 ProteinModelPortal:P23758 SMR:P23758 DIP:DIP-23815N
            IntAct:P23758 MINT:MINT-324258 STRING:P23758 PRIDE:P23758
            EnsemblMetazoa:FBtr0087311 EnsemblMetazoa:FBtr0329908 GeneID:36741
            KEGG:dme:Dmel_CG8246 CTD:36741 FlyBase:FBgn0003130 eggNOG:NOG268730
            InParanoid:P23758 OMA:KEENSGM OrthoDB:EOG4D7WNQ PhylomeDB:P23758
            GenomeRNAi:36741 NextBio:800129 Bgee:P23758 GermOnline:CG8246
            Uniprot:P23758
        Length = 425

 Score = 241 (89.9 bits), Expect = 6.3e-20, P = 6.3e-20
 Identities = 51/89 (57%), Positives = 62/89 (69%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-VATPDVEKRIEEY 59
             +A  GVRPC ISRQL VSHGCVSKIL R+ ETGSIRPG IGGSK + VATP V K+I   
Sbjct:    33 LALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRPGSIGGSKTKQVATPTVVKKIIRL 92

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTES 88
             K+ N  + +WE+R++L +    D S   S
Sbjct:    93 KEENSGMFAWEIREQLQQQRVCDPSSVPS 121


>UNIPROTKB|G3V4Q1 [details] [associations]
            symbol:PAX4 "Paired box protein Pax-4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
            PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057
            SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC073934
            HGNC:HGNC:8618 ProteinModelPortal:G3V4Q1 SMR:G3V4Q1
            Ensembl:ENST00000463946 ArrayExpress:G3V4Q1 Bgee:G3V4Q1
            Uniprot:G3V4Q1
        Length = 341

 Score = 166 (63.5 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
 Identities = 40/93 (43%), Positives = 51/93 (54%)

Query:     8 PCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYKKTNPNIT 67
             P   S   +VS+GCVSKIL RY  TG + P  IGGSKPR+ATP V  RI + K   P + 
Sbjct:    30 PVPASHLTQVSNGCVSKILGRYYRTGVLEPKGIGGSKPRLATPPVVARIAQLKGECPALF 89

Query:    68 SWEVRDKLIKVSRLDDSDTESEPGI--VLKRKQ 98
             +WE++ +L          T S   I  VL+  Q
Sbjct:    90 AWEIQRQLCAEGLCTQDKTPSVSSINRVLRALQ 122

 Score = 93 (37.8 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
 Identities = 20/44 (45%), Positives = 25/44 (56%)

Query:   100 RSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             R+RT F+ +Q E LEK FQR  YPD   R  LA    + E  V+
Sbjct:   162 RNRTIFSPSQAEALEKEFQRGQYPDSVARGKLATATSLPEDTVR 205


>ZFIN|ZDB-GENE-041210-244 [details] [associations]
            symbol:pax4 "paired box 4" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
            PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 ZFIN:ZDB-GENE-041210-244 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:5078
            EMBL:FR727738 RefSeq:NP_001232009.2 UniGene:Dr.155413 GeneID:561564
            KEGG:dre:561564 NextBio:20883985 Uniprot:G2ZGB0
        Length = 360

 Score = 233 (87.1 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 49/124 (39%), Positives = 75/124 (60%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             +A  G+RPC ISR L+VS+GCVSKIL R+Q TG+I P  +GGS+PR+ TP+V   I ++K
Sbjct:    43 LATEGMRPCEISRILKVSNGCVSKILGRFQRTGAIGPKAVGGSRPRLLTPEVISIIVQHK 102

Query:    61 KTNPNITSWEVRDKLI--KVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQ 118
             + NP + +WE+R KL   +  R D   + S    +LK+  +     + + +    E    
Sbjct:   103 RQNPTLFAWEIRQKLATERACRGDQVPSVSSINRILKKIHQDVDIAYPNEKHYHTEHLNV 162

Query:   119 RSHY 122
             +SH+
Sbjct:   163 QSHF 166


>UNIPROTKB|F1M5I1 [details] [associations]
            symbol:Pax6 "Paired box protein Pax-6" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 RGD:3258
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00952223
            Ensembl:ENSRNOT00000064080 ArrayExpress:F1M5I1 Uniprot:F1M5I1
        Length = 305

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 49/90 (54%), Positives = 62/90 (68%)

Query:     1 MAAAGVRPCVISRQLR--------------VSHGCVSKILNRYQETGSIRPGVIGGSKPR 46
             +A +G RPC ISR L+              VS+GCVSKIL RY ETGSIRP  IGGSKPR
Sbjct:    83 LAHSGARPCDISRILQTHADAKVQVLDSENVSNGCVSKILGRYYETGSIRPRAIGGSKPR 142

Query:    47 VATPDVEKRIEEYKKTNPNITSWEVRDKLI 76
             VATP+V  +I +YK+  P+I +WE+RD+L+
Sbjct:   143 VATPEVVSKIAQYKRECPSIFAWEIRDRLL 172

 Score = 140 (54.3 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 45/126 (35%), Positives = 66/126 (52%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E +  
Sbjct:   192 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGQGE 250

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   251 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 299

Query:   123 PDIYTR 128
             PD++ R
Sbjct:   300 PDVFAR 305


>UNIPROTKB|F1M6K5 [details] [associations]
            symbol:Pax6 "Paired box protein Pax-6" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 RGD:3258
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00949320
            Ensembl:ENSRNOT00000065317 ArrayExpress:F1M6K5 Uniprot:F1M6K5
        Length = 210

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 43/76 (56%), Positives = 56/76 (73%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYK 60
             + + G +P    R   VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK
Sbjct:     7 VGSGGCQPAPACRT--VSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYK 64

Query:    61 KTNPNITSWEVRDKLI 76
             +  P+I +WE+RD+L+
Sbjct:    65 RECPSIFAWEIRDRLL 80

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 44/123 (35%), Positives = 64/123 (52%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E +  
Sbjct:   100 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGQGE 158

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   159 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 207

Query:   123 PDI 125
             PD+
Sbjct:   208 PDV 210


>UNIPROTKB|G3V3Q9 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:Z83307
            EMBL:Z95332 HGNC:HGNC:8620 ProteinModelPortal:G3V3Q9 SMR:G3V3Q9
            Ensembl:ENST00000533333 ArrayExpress:G3V3Q9 Bgee:G3V3Q9
            Uniprot:G3V3Q9
        Length = 377

 Score = 220 (82.5 bits), Expect = 8.4e-18, P = 8.4e-18
 Identities = 40/62 (64%), Positives = 52/62 (83%)

Query:    15 LRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEEYKKTNPNITSWEVRDK 74
             ++VS+GCVSKIL RY ETGSIRP  IGGSKPRVATP+V  +I +YK+  P+I +WE+RD+
Sbjct:     1 MQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDR 60

Query:    75 LI 76
             L+
Sbjct:    61 LL 62

 Score = 170 (64.9 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 52/141 (36%), Positives = 74/141 (52%)

Query:     6 VRPCVISRQLRVSHGCVSKILNRYQETGS--IRPGVIGG-SKPRVATPDVEKRIEEYKKT 62
             +R     +Q   + G   K+     +TGS   RPG   G S P   T D  ++ +E    
Sbjct:    82 LRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQ-QEGGGE 140

Query:    63 NPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHY 122
             N N  S          S  +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HY
Sbjct:   141 NTNSIS----------SNGEDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHY 189

Query:   123 PDIYTREALANKFGMTETRVQ 143
             PD++ RE LA K  + E R+Q
Sbjct:   190 PDVFARERLAAKIDLPEARIQ 210


>WB|WBGene00003939 [details] [associations]
            symbol:pax-3 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
            genitalia development" evidence=IMP] [GO:0010171 "body
            morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0018991
            "oviposition" evidence=IMP] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IMP] [GO:0031581 "hemidesmosome
            assembly" evidence=IGI] InterPro:IPR001356 InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 SMART:SM00389
            GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0018991 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
            GO:GO:0040011 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040035
            GO:GO:0031581 EMBL:Z48783 HSSP:P06601 EMBL:Z48582
            GeneTree:ENSGT00680000099553 PIR:T21461 RefSeq:NP_496189.2
            UniGene:Cel.15301 ProteinModelPortal:G5ED66 SMR:G5ED66
            IntAct:G5ED66 EnsemblMetazoa:F27E5.2 GeneID:185022
            KEGG:cel:CELE_F27E5.2 CTD:185022 WormBase:F27E5.2 OMA:ISIDECS
            NextBio:926774 Uniprot:G5ED66
        Length = 308

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 47/93 (50%), Positives = 58/93 (62%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGS-KPRVATPDVEKRIEEY 59
             MA  G++PC ISRQL+VSHG VSKILNRY ETGSI PG IGGS + R+    VEK I   
Sbjct:    41 MAKKGIKPCHISRQLKVSHGAVSKILNRYAETGSISPGQIGGSPRARLTVQAVEKEILIA 100

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI 92
                NP +++ E+RD LI        +  + P I
Sbjct:   101 CDENPQMSAAELRDWLIHKDICTKGNAPTVPAI 133


>UNIPROTKB|G5ED66 [details] [associations]
            symbol:pax-3 "Protein PAX-3" species:6239 "Caenorhabditis
            elegans" [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
            Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
            GO:GO:0002119 GO:GO:0043565 GO:GO:0010171 GO:GO:0040011
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040035 GO:GO:0031581
            EMBL:Z48783 HSSP:P06601 EMBL:Z48582 GeneTree:ENSGT00680000099553
            PIR:T21461 RefSeq:NP_496189.2 UniGene:Cel.15301
            ProteinModelPortal:G5ED66 SMR:G5ED66 IntAct:G5ED66
            EnsemblMetazoa:F27E5.2 GeneID:185022 KEGG:cel:CELE_F27E5.2
            CTD:185022 WormBase:F27E5.2 OMA:ISIDECS NextBio:926774
            Uniprot:G5ED66
        Length = 308

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 47/93 (50%), Positives = 58/93 (62%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGS-KPRVATPDVEKRIEEY 59
             MA  G++PC ISRQL+VSHG VSKILNRY ETGSI PG IGGS + R+    VEK I   
Sbjct:    41 MAKKGIKPCHISRQLKVSHGAVSKILNRYAETGSISPGQIGGSPRARLTVQAVEKEILIA 100

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGI 92
                NP +++ E+RD LI        +  + P I
Sbjct:   101 CDENPQMSAAELRDWLIHKDICTKGNAPTVPAI 133


>FB|FBgn0000061 [details] [associations]
            symbol:al "aristaless" species:7227 "Drosophila melanogaster"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS;NAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;NAS] [GO:0007449 "proximal/distal pattern formation,
            imaginal disc" evidence=NAS] [GO:0048800 "antennal morphogenesis"
            evidence=IMP] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0035015
            "elongation of arista core" evidence=IMP] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IEP] [GO:0035218
            "leg disc development" evidence=IMP] [GO:0022416 "chaeta
            development" evidence=IMP] [GO:0043234 "protein complex"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA;IPI] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0007480 "imaginal
            disc-derived leg morphogenesis" evidence=IMP] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043234
            EMBL:AE014134 GO:GO:0003700 GO:GO:0045747 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0022416 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GeneTree:ENSGT00700000104013 EMBL:L08401
            EMBL:AY121696 PIR:A40685 RefSeq:NP_722629.1 UniGene:Dm.6423
            PDB:3A01 PDB:3A02 PDB:3LNQ PDBsum:3A01 PDBsum:3A02 PDBsum:3LNQ
            ProteinModelPortal:Q06453 SMR:Q06453 DIP:DIP-23247N IntAct:Q06453
            MINT:MINT-827785 STRING:Q06453 EnsemblMetazoa:FBtr0078053
            GeneID:33208 KEGG:dme:Dmel_CG3935 UCSC:CG3935-RA CTD:33208
            FlyBase:FBgn0000061 eggNOG:NOG313402 InParanoid:Q06453 KO:K09452
            OMA:FTHLGFQ OrthoDB:EOG41ZCSM PhylomeDB:Q06453
            EvolutionaryTrace:Q06453 GenomeRNAi:33208 NextBio:782439
            Bgee:Q06453 GermOnline:CG3935 GO:GO:0000976 GO:GO:0035015
            GO:GO:0007480 Uniprot:Q06453
        Length = 408

 Score = 196 (74.1 bits), Expect = 5.3e-15, P = 5.3e-15
 Identities = 39/61 (63%), Positives = 48/61 (78%)

Query:    83 DSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRV 142
             +SD E++     KRKQRR RTTFTS QLEELEK+F R+HYPD++TRE LA K G+TE R+
Sbjct:    71 NSDCEADE-YAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARI 129

Query:   143 Q 143
             Q
Sbjct:   130 Q 130


>UNIPROTKB|I3LRI8 [details] [associations]
            symbol:I3LRI8 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0046622 "positive
            regulation of organ growth" evidence=IEA] [GO:0042127 "regulation
            of cell proliferation" evidence=IEA] [GO:0021853 "cerebral cortex
            GABAergic interneuron migration" evidence=IEA] [GO:0021846 "cell
            proliferation in forebrain" evidence=IEA] [GO:0021831 "embryonic
            olfactory bulb interneuron precursor migration" evidence=IEA]
            [GO:0021800 "cerebral cortex tangential migration" evidence=IEA]
            [GO:0021759 "globus pallidus development" evidence=IEA] [GO:0007411
            "axon guidance" evidence=IEA] [GO:0001764 "neuron migration"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
            GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
            OMA:VTHPEER GO:GO:0021846 GO:GO:0021853 GO:GO:0021800 GO:GO:0021831
            GO:GO:0021759 EMBL:FP339588 Ensembl:ENSSSCT00000032103
            Uniprot:I3LRI8
        Length = 451

 Score = 196 (74.1 bits), Expect = 7.0e-15, P = 7.0e-15
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   206 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 262


>ZFIN|ZDB-GENE-990415-15 [details] [associations]
            symbol:arxa "aristaless related homeobox a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-990415-15 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            eggNOG:NOG313402 KO:K09452 EMBL:AB006104 IPI:IPI00502004
            RefSeq:NP_571459.1 UniGene:Dr.9011 ProteinModelPortal:O42115
            SMR:O42115 STRING:O42115 PRIDE:O42115 Ensembl:ENSDART00000080810
            GeneID:30657 KEGG:dre:30657 CTD:30657 GeneTree:ENSGT00700000104279
            HOGENOM:HOG000012381 HOVERGEN:HBG004285 InParanoid:O42115
            OMA:HYLEGGP OrthoDB:EOG43TZW9 NextBio:20807013 ArrayExpress:O42115
            Bgee:O42115 Uniprot:O42115
        Length = 453

 Score = 195 (73.7 bits), Expect = 9.0e-15, P = 9.0e-15
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   204 SDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 260


>UNIPROTKB|J9NW39 [details] [associations]
            symbol:ARX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
            EMBL:AAEX03026212 EMBL:AAEX03026213 Ensembl:ENSCAFT00000048909
            Uniprot:J9NW39
        Length = 520

 Score = 196 (74.1 bits), Expect = 9.6e-15, P = 9.6e-15
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   275 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 331


>UNIPROTKB|Q96QS3 [details] [associations]
            symbol:ARX "Homeobox protein ARX" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0021759 "globus
            pallidus development" evidence=IEA] [GO:0021800 "cerebral cortex
            tangential migration" evidence=IEA] [GO:0021831 "embryonic
            olfactory bulb interneuron precursor migration" evidence=IEA]
            [GO:0021846 "cell proliferation in forebrain" evidence=IEA]
            [GO:0021853 "cerebral cortex GABAergic interneuron migration"
            evidence=IEA] [GO:0042127 "regulation of cell proliferation"
            evidence=IEA] [GO:0046622 "positive regulation of organ growth"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0042127 Orphanet:777 GO:GO:0046622 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
            HOGENOM:HOG000012381 HOVERGEN:HBG004285 EMBL:AY038071
            IPI:IPI00045066 RefSeq:NP_620689.1 UniGene:Hs.300304
            ProteinModelPortal:Q96QS3 SMR:Q96QS3 STRING:Q96QS3
            PhosphoSite:Q96QS3 DMDM:27923733 PaxDb:Q96QS3 PRIDE:Q96QS3
            Ensembl:ENST00000379044 GeneID:170302 KEGG:hsa:170302
            UCSC:uc004dbp.4 CTD:170302 GeneCards:GC0XM025021 HGNC:HGNC:18060
            MIM:300004 MIM:300215 MIM:300382 MIM:300419 MIM:308350 MIM:309510
            neXtProt:NX_Q96QS3 Orphanet:1934 Orphanet:2508 Orphanet:94083
            Orphanet:3175 Orphanet:3451 Orphanet:452 PharmGKB:PA25024
            InParanoid:Q96QS3 OMA:VTHPEER PhylomeDB:Q96QS3 GenomeRNAi:170302
            NextBio:88881 Bgee:Q96QS3 CleanEx:HS_ARX Genevestigator:Q96QS3
            GermOnline:ENSG00000004848 GO:GO:0021846 GO:GO:0021853
            GO:GO:0021800 GO:GO:0021831 GO:GO:0021759 Uniprot:Q96QS3
        Length = 562

 Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   317 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 373


>UNIPROTKB|E2QVR4 [details] [associations]
            symbol:ARX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 Ensembl:ENSCAFT00000021479 Uniprot:E2QVR4
        Length = 564

 Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   319 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 375


>MGI|MGI:1097716 [details] [associations]
            symbol:Arx "aristaless related homeobox" species:10090 "Mus
            musculus" [GO:0001764 "neuron migration" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IC] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0021759
            "globus pallidus development" evidence=IMP] [GO:0021772 "olfactory
            bulb development" evidence=IMP] [GO:0021800 "cerebral cortex
            tangential migration" evidence=IMP] [GO:0021831 "embryonic
            olfactory bulb interneuron precursor migration" evidence=IMP]
            [GO:0021846 "cell proliferation in forebrain" evidence=IMP]
            [GO:0021853 "cerebral cortex GABAergic interneuron migration"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0030900 "forebrain development" evidence=IMP] [GO:0042127
            "regulation of cell proliferation" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0046622 "positive
            regulation of organ growth" evidence=IMP] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:1097716 GO:GO:0005634
            GO:GO:0007411 GO:GO:0001764 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
            GO:GO:0046622 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            eggNOG:NOG313402 KO:K09452 GeneTree:ENSGT00700000104279
            HOGENOM:HOG000012381 HOVERGEN:HBG004285 OrthoDB:EOG43TZW9
            CTD:170302 GO:GO:0021846 GO:GO:0021853 GO:GO:0021800 GO:GO:0021831
            GO:GO:0021759 EMBL:AB006103 EMBL:AB026674 EMBL:AL590876
            EMBL:BC052033 IPI:IPI00126550 RefSeq:NP_031518.2 UniGene:Mm.275547
            ProteinModelPortal:O35085 SMR:O35085 STRING:O35085
            PhosphoSite:O35085 PRIDE:O35085 Ensembl:ENSMUST00000046565
            Ensembl:ENSMUST00000113947 GeneID:11878 KEGG:mmu:11878
            UCSC:uc009tsq.1 InParanoid:O35085 NextBio:279907 Bgee:O35085
            CleanEx:MM_ARX Genevestigator:O35085 GermOnline:ENSMUSG00000035277
            Uniprot:O35085
        Length = 564

 Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   319 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 375


>RGD|1562672 [details] [associations]
            symbol:Arx "aristaless related homeobox" species:10116 "Rattus
            norvegicus" [GO:0001764 "neuron migration" evidence=ISO]
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO] [GO:0008150
            "biological_process" evidence=ND] [GO:0021759 "globus pallidus
            development" evidence=ISO] [GO:0021772 "olfactory bulb development"
            evidence=ISO] [GO:0021800 "cerebral cortex tangential migration"
            evidence=ISO] [GO:0021831 "embryonic olfactory bulb interneuron
            precursor migration" evidence=ISO] [GO:0021846 "cell proliferation
            in forebrain" evidence=ISO] [GO:0021853 "cerebral cortex GABAergic
            interneuron migration" evidence=ISO] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0030900 "forebrain development"
            evidence=ISO] [GO:0042127 "regulation of cell proliferation"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0046622 "positive regulation of organ growth"
            evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1562672 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
            HOGENOM:HOG000012381 HOVERGEN:HBG004285 CTD:170302 GO:GO:0021846
            GO:GO:0021853 GO:GO:0021800 GO:GO:0021831 GO:GO:0021759
            EMBL:EF638804 IPI:IPI00858330 RefSeq:NP_001093644.1
            UniGene:Rn.22484 ProteinModelPortal:A6YP92 SMR:A6YP92 STRING:A6YP92
            GeneID:317268 KEGG:rno:317268 NextBio:671526 ArrayExpress:A6YP92
            Genevestigator:A6YP92 Uniprot:A6YP92
        Length = 566

 Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   321 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 377


>UNIPROTKB|D4A5S8 [details] [associations]
            symbol:Arx "Homeobox protein ARX" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 IPI:IPI00950113
            Ensembl:ENSRNOT00000067410 ArrayExpress:D4A5S8 Uniprot:D4A5S8
        Length = 566

 Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   321 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 377


>UNIPROTKB|F1LQW2 [details] [associations]
            symbol:Arx "Homeobox protein ARX" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1562672 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0021846
            GO:GO:0021853 GO:GO:0021800 GO:GO:0021831 GO:GO:0021759
            IPI:IPI00858330 Ensembl:ENSRNOT00000049655 ArrayExpress:F1LQW2
            Uniprot:F1LQW2
        Length = 566

 Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   321 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 377


>UNIPROTKB|F6XTT5 [details] [associations]
            symbol:ARX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
            OMA:VTHPEER Ensembl:ENSCAFT00000021479 EMBL:AAEX03026212
            EMBL:AAEX03026213 Uniprot:F6XTT5
        Length = 574

 Score = 196 (74.1 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query:    86 TESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++SE G+ LKRKQRR RTTFTS QLEELE++FQ++HYPD++TRE LA +  +TE RVQ
Sbjct:   329 SDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 385


>UNIPROTKB|E2R2D3 [details] [associations]
            symbol:PHOX2A "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048485 "sympathetic nervous system
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043576 "regulation of respiratory gaseous exchange"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0021703 "locus ceruleus development" evidence=IEA] [GO:0021642
            "trochlear nerve formation" evidence=IEA] [GO:0021623 "oculomotor
            nerve formation" evidence=IEA] [GO:0021523 "somatic motor neuron
            differentiation" evidence=IEA] [GO:0003357 "noradrenergic neuron
            differentiation" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0030901 GO:GO:0048485
            GO:GO:0043576 GO:GO:0000977 GO:GO:0048486 GO:GO:0021523
            GO:GO:0021703 GO:GO:0003357 GeneTree:ENSGT00700000104256 CTD:401
            KO:K09330 OMA:KGPLWAG EMBL:AAEX03012825 RefSeq:XP_542326.2
            Ensembl:ENSCAFT00000009226 GeneID:485208 KEGG:cfa:485208
            NextBio:20859246 Uniprot:E2R2D3
        Length = 284

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 39/56 (69%), Positives = 44/56 (78%)

Query:    89 EP-GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             EP G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    80 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 135


>UNIPROTKB|O14813 [details] [associations]
            symbol:PHOX2A "Paired mesoderm homeobox protein 2A"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0021523 "somatic
            motor neuron differentiation" evidence=IEA] [GO:0021623 "oculomotor
            nerve formation" evidence=IEA] [GO:0021642 "trochlear nerve
            formation" evidence=IEA] [GO:0021703 "locus ceruleus development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0043576 "regulation of respiratory gaseous exchange"
            evidence=IEA] [GO:0048485 "sympathetic nervous system development"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0000977 "RNA polymerase II regulatory region sequence-specific
            DNA binding" evidence=IDA] [GO:0003357 "noradrenergic neuron
            differentiation" evidence=IC;NAS] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0071542 "dopaminergic neuron differentiation" evidence=IC]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0071542 EMBL:CH471076 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790
            GO:GO:0030901 GO:GO:0048485 GO:GO:0043576 GO:GO:0000977
            GO:GO:0048486 GO:GO:0021523 GO:GO:0021703 GO:GO:0003357
            Orphanet:45358 EMBL:AF022724 EMBL:AF022722 EMBL:AF022723
            EMBL:AK290645 EMBL:BC041564 IPI:IPI00024171 RefSeq:NP_005160.2
            UniGene:Hs.731565 ProteinModelPortal:O14813 SMR:O14813
            STRING:O14813 PhosphoSite:O14813 PRIDE:O14813 DNASU:401
            Ensembl:ENST00000298231 GeneID:401 KEGG:hsa:401 UCSC:uc001osh.4
            CTD:401 GeneCards:GC11M071950 HGNC:HGNC:691 MIM:602078 MIM:602753
            neXtProt:NX_O14813 PharmGKB:PA28093 eggNOG:NOG301263
            HOGENOM:HOG000013060 HOVERGEN:HBG053590 InParanoid:O14813 KO:K09330
            OMA:KGPLWAG OrthoDB:EOG4N30PS PhylomeDB:O14813 GenomeRNAi:401
            NextBio:1681 Bgee:O14813 CleanEx:HS_PHOX2A Genevestigator:O14813
            GermOnline:ENSG00000165462 Uniprot:O14813
        Length = 284

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 39/56 (69%), Positives = 44/56 (78%)

Query:    89 EP-GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             EP G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    80 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 135


>MGI|MGI:106633 [details] [associations]
            symbol:Phox2a "paired-like homeobox 2a" species:10090 "Mus
            musculus" [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000977
            "RNA polymerase II regulatory region sequence-specific DNA binding"
            evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=ISO]
            [GO:0003357 "noradrenergic neuron differentiation" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0021523 "somatic motor neuron differentiation" evidence=IMP]
            [GO:0021623 "oculomotor nerve formation" evidence=IMP] [GO:0021642
            "trochlear nerve formation" evidence=IMP] [GO:0021703 "locus
            ceruleus development" evidence=IMP] [GO:0030901 "midbrain
            development" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0043576 "regulation of respiratory
            gaseous exchange" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0048485 "sympathetic nervous system development" evidence=IMP]
            [GO:0048486 "parasympathetic nervous system development"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:106633 GO:GO:0005634 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000790 GO:GO:0030901 GO:GO:0021623 GO:GO:0048485
            GO:GO:0043576 GO:GO:0000977 GO:GO:0021523 GO:GO:0021703
            GO:GO:0003357 GeneTree:ENSGT00700000104256 CTD:401 eggNOG:NOG301263
            HOGENOM:HOG000013060 HOVERGEN:HBG053590 KO:K09330 OMA:KGPLWAG
            OrthoDB:EOG4N30PS EMBL:X75014 IPI:IPI00121059 PIR:I48713
            RefSeq:NP_032913.1 UniGene:Mm.5028 ProteinModelPortal:Q62066
            SMR:Q62066 STRING:Q62066 PhosphoSite:Q62066 PRIDE:Q62066
            Ensembl:ENSMUST00000008090 GeneID:11859 KEGG:mmu:11859
            UCSC:uc009ipe.2 InParanoid:Q62066 NextBio:279855 Bgee:Q62066
            CleanEx:MM_PHOX2A Genevestigator:Q62066
            GermOnline:ENSMUSG00000007946 GO:GO:0021642 Uniprot:Q62066
        Length = 280

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 39/56 (69%), Positives = 44/56 (78%)

Query:    89 EP-GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             EP G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    80 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 135


>RGD|621323 [details] [associations]
            symbol:Phox2a "paired-like homeobox 2a" species:10116 "Rattus
            norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
            [GO:0000977 "RNA polymerase II regulatory region sequence-specific
            DNA binding" evidence=ISO] [GO:0001077 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=IDA] [GO:0003357 "noradrenergic neuron
            differentiation" evidence=ISO] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007568
            "aging" evidence=IEP] [GO:0021523 "somatic motor neuron
            differentiation" evidence=ISO] [GO:0021623 "oculomotor nerve
            formation" evidence=ISO] [GO:0021642 "trochlear nerve formation"
            evidence=ISO] [GO:0021703 "locus ceruleus development"
            evidence=ISO] [GO:0030901 "midbrain development" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043576 "regulation of respiratory gaseous exchange"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0048485
            "sympathetic nervous system development" evidence=ISO] [GO:0048486
            "parasympathetic nervous system development" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:U25967 RGD:621323 GO:GO:0007568 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0000790 GO:GO:0030901
            GO:GO:0048485 GO:GO:0043576 GO:GO:0000977 GO:GO:0048486
            GO:GO:0021523 GO:GO:0021703 GO:GO:0003357 CTD:401 eggNOG:NOG301263
            HOGENOM:HOG000013060 HOVERGEN:HBG053590 KO:K09330 OrthoDB:EOG4N30PS
            IPI:IPI00208271 RefSeq:NP_446321.1 UniGene:Rn.2858
            ProteinModelPortal:Q62782 SMR:Q62782 STRING:Q62782 GeneID:116648
            KEGG:rno:116648 UCSC:RGD:621323 InParanoid:Q62782 NextBio:619395
            Genevestigator:Q62782 GermOnline:ENSRNOG00000019706 Uniprot:Q62782
        Length = 281

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 39/56 (69%), Positives = 44/56 (78%)

Query:    89 EP-GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             EP G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    80 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 135


>UNIPROTKB|G3V8L2 [details] [associations]
            symbol:Phox2a "Paired-like homeobox 2a" species:10116
            "Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0000977 "RNA polymerase II regulatory region sequence-specific
            DNA binding" evidence=IEA] [GO:0003357 "noradrenergic neuron
            differentiation" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0021523
            "somatic motor neuron differentiation" evidence=IEA] [GO:0021623
            "oculomotor nerve formation" evidence=IEA] [GO:0021642 "trochlear
            nerve formation" evidence=IEA] [GO:0021703 "locus ceruleus
            development" evidence=IEA] [GO:0030901 "midbrain development"
            evidence=IEA] [GO:0043576 "regulation of respiratory gaseous
            exchange" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048485 "sympathetic nervous system development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            RGD:621323 GO:GO:0005634 EMBL:CH473956 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
            UniGene:Rn.2858 Ensembl:ENSRNOT00000026702 Uniprot:G3V8L2
        Length = 281

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 39/56 (69%), Positives = 44/56 (78%)

Query:    89 EP-GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             EP G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    80 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 135


>UNIPROTKB|F1MIH1 [details] [associations]
            symbol:PHOX2A "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0048485 "sympathetic nervous system development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0043576
            "regulation of respiratory gaseous exchange" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0021703 "locus
            ceruleus development" evidence=IEA] [GO:0021642 "trochlear nerve
            formation" evidence=IEA] [GO:0021623 "oculomotor nerve formation"
            evidence=IEA] [GO:0021523 "somatic motor neuron differentiation"
            evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
            evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0030901
            GO:GO:0048485 GO:GO:0043576 GO:GO:0000977 GO:GO:0048486
            GO:GO:0021523 GO:GO:0021703 GO:GO:0003357
            GeneTree:ENSGT00700000104256 OMA:KGPLWAG EMBL:DAAA02041007
            IPI:IPI00705954 Ensembl:ENSBTAT00000025512 Uniprot:F1MIH1
        Length = 285

 Score = 185 (70.2 bits), Expect = 1.9e-14, P = 1.9e-14
 Identities = 39/56 (69%), Positives = 44/56 (78%)

Query:    89 EP-GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             EP G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    81 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 136


>UNIPROTKB|F1SUV6 [details] [associations]
            symbol:PHOX2A "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048485 "sympathetic nervous system development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0043576
            "regulation of respiratory gaseous exchange" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0021703 "locus
            ceruleus development" evidence=IEA] [GO:0021642 "trochlear nerve
            formation" evidence=IEA] [GO:0021623 "oculomotor nerve formation"
            evidence=IEA] [GO:0021523 "somatic motor neuron differentiation"
            evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
            evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0030901
            GO:GO:0048485 GO:GO:0043576 GO:GO:0000977 GO:GO:0048486
            GO:GO:0021523 GO:GO:0021703 GO:GO:0003357
            GeneTree:ENSGT00700000104256 OMA:KGPLWAG EMBL:FP090889
            Ensembl:ENSSSCT00000016164 Uniprot:F1SUV6
        Length = 287

 Score = 185 (70.2 bits), Expect = 2.0e-14, P = 2.0e-14
 Identities = 39/56 (69%), Positives = 44/56 (78%)

Query:    89 EP-GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             EP G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    81 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 136


>UNIPROTKB|F1NMR5 [details] [associations]
            symbol:F1NMR5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0002087 "regulation of respiratory gaseous exchange by
            neurological system process" evidence=IEA] [GO:0003357
            "noradrenergic neuron differentiation" evidence=IEA] [GO:0003360
            "brainstem development" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0010001 "glial
            cell differentiation" evidence=IEA] [GO:0021533 "cell
            differentiation in hindbrain" evidence=IEA] [GO:0021723 "medullary
            reticular formation development" evidence=IEA] [GO:0021934
            "hindbrain tangential cell migration" evidence=IEA] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048484 "enteric
            nervous system development" evidence=IEA] [GO:0048485 "sympathetic
            nervous system development" evidence=IEA] [GO:0048486
            "parasympathetic nervous system development" evidence=IEA]
            [GO:0048839 "inner ear development" evidence=IEA] [GO:0048894
            "efferent axon development in a lateral line nerve" evidence=IEA]
            [GO:0060541 "respiratory system development" evidence=IEA]
            [GO:0061452 "retrotrapezoid nucleus neuron differentiation"
            evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
            evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
            evidence=IEA] [GO:1901166 "neural crest cell migration involved in
            autonomic nervous system development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0008285 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0071773 GO:GO:0000977
            GeneTree:ENSGT00700000104256 OMA:LVKTSMF EMBL:AADN02031232
            EMBL:AADN02031233 IPI:IPI00813291 Ensembl:ENSGALT00000037451
            Uniprot:F1NMR5
        Length = 229

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143


>UNIPROTKB|F1NMR6 [details] [associations]
            symbol:F1NMR6 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
            EMBL:AADN02031232 EMBL:AADN02031233 IPI:IPI00823059
            Ensembl:ENSGALT00000037450 Uniprot:F1NMR6
        Length = 213

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    88 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 140


>UNIPROTKB|H0YAD2 [details] [associations]
            symbol:PHOX2B "Paired mesoderm homeobox protein 2B"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC105389 HGNC:HGNC:9143
            Ensembl:ENST00000510424 Uniprot:H0YAD2
        Length = 180

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    31 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 83


>ZFIN|ZDB-GENE-050407-3 [details] [associations]
            symbol:phox2bb "paired-like homeobox 2bb"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0048484 "enteric nervous system development"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050407-3 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0048484 eggNOG:NOG301263 HOGENOM:HOG000013060
            HOVERGEN:HBG053590 OrthoDB:EOG4N30PS EMBL:AY883168 IPI:IPI00774848
            UniGene:Dr.160837 UniGene:Dr.93056 ProteinModelPortal:Q3T498
            SMR:Q3T498 STRING:Q3T498 Uniprot:Q3T498
        Length = 285

 Score = 182 (69.1 bits), Expect = 4.4e-14, P = 4.4e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    90 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 142


>UNIPROTKB|E2RMY1 [details] [associations]
            symbol:PHOX2B "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:1901166 "neural crest cell migration involved
            in autonomic nervous system development" evidence=IEA] [GO:0071773
            "cellular response to BMP stimulus" evidence=IEA] [GO:0071542
            "dopaminergic neuron differentiation" evidence=IEA] [GO:0061452
            "retrotrapezoid nucleus neuron differentiation" evidence=IEA]
            [GO:0060541 "respiratory system development" evidence=IEA]
            [GO:0048894 "efferent axon development in a lateral line nerve"
            evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
            [GO:0048486 "parasympathetic nervous system development"
            evidence=IEA] [GO:0048485 "sympathetic nervous system development"
            evidence=IEA] [GO:0048484 "enteric nervous system development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IEA] [GO:0021934 "hindbrain tangential cell migration"
            evidence=IEA] [GO:0021723 "medullary reticular formation
            development" evidence=IEA] [GO:0021533 "cell differentiation in
            hindbrain" evidence=IEA] [GO:0010001 "glial cell differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0003360 "brainstem development"
            evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
            evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
            exchange by neurological system process" evidence=IEA] [GO:0001764
            "neuron migration" evidence=IEA] [GO:0000978 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0001764 GO:GO:0008285 GO:GO:0045944
            GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 GO:GO:0048839
            GO:GO:0000977 GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
            GeneTree:ENSGT00700000104256 KO:K09330 CTD:8929 OMA:LVKTSMF
            GO:GO:0048894 GO:GO:0021934 EMBL:AAEX03009007 RefSeq:XP_852840.1
            Ensembl:ENSCAFT00000002818 GeneID:610284 KEGG:cfa:610284
            NextBio:20895849 Uniprot:E2RMY1
        Length = 314

 Score = 182 (69.1 bits), Expect = 7.7e-14, P = 7.7e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143


>UNIPROTKB|Q99453 [details] [associations]
            symbol:PHOX2B "Paired mesoderm homeobox protein 2B"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0000977 "RNA polymerase II regulatory region sequence-specific
            DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0048484 "enteric nervous system development" evidence=IEP]
            [GO:0003360 "brainstem development" evidence=IEP] [GO:0048483
            "autonomic nervous system development" evidence=IMP] [GO:0000978
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding" evidence=IDA] [GO:0071542 "dopaminergic neuron
            differentiation" evidence=IC;ISS] [GO:1901166 "neural crest cell
            migration involved in autonomic nervous system development"
            evidence=ISS] [GO:0002087 "regulation of respiratory gaseous
            exchange by neurological system process" evidence=ISS] [GO:0010001
            "glial cell differentiation" evidence=ISS] [GO:0021723 "medullary
            reticular formation development" evidence=ISS] [GO:0061452
            "retrotrapezoid nucleus neuron differentiation" evidence=ISS]
            [GO:0048485 "sympathetic nervous system development" evidence=ISS]
            [GO:0048839 "inner ear development" evidence=ISS] [GO:0060541
            "respiratory system development" evidence=ISS] [GO:0071773
            "cellular response to BMP stimulus" evidence=ISS] [GO:0003357
            "noradrenergic neuron differentiation" evidence=IC;ISS] [GO:0001764
            "neuron migration" evidence=ISS] [GO:0021533 "cell differentiation
            in hindbrain" evidence=ISS] [GO:0021934 "hindbrain tangential cell
            migration" evidence=ISS] [GO:0048486 "parasympathetic nervous
            system development" evidence=ISS] [GO:0048894 "efferent axon
            development in a lateral line nerve" evidence=ISS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AF117979 GO:GO:0001764 GO:GO:0008285 GO:GO:0071542
            GO:GO:0045944 GO:GO:0045665 GO:GO:0002087 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000978
            GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 Orphanet:635
            GO:GO:0048839 GO:GO:0048485 Orphanet:99803 Orphanet:661
            GO:GO:0048484 GO:GO:0048486 GO:GO:0010001 MIM:209880 GO:GO:0003360
            GO:GO:0021533 GO:GO:0003357 eggNOG:NOG301263 HOGENOM:HOG000013060
            KO:K09330 EMBL:D82344 EMBL:AB015671 EMBL:BC017199 IPI:IPI00293143
            PIR:JC5273 RefSeq:NP_003915.2 UniGene:Hs.87202
            ProteinModelPortal:Q99453 SMR:Q99453 STRING:Q99453
            PhosphoSite:Q99453 DMDM:116242712 PaxDb:Q99453 PRIDE:Q99453
            Ensembl:ENST00000226382 GeneID:8929 KEGG:hsa:8929 UCSC:uc003gwf.4
            CTD:8929 GeneCards:GC04M041746 H-InvDB:HIX0120072 HGNC:HGNC:9143
            MIM:603851 MIM:613013 neXtProt:NX_Q99453 PharmGKB:PA33467
            HOVERGEN:HBG094678 InParanoid:Q99453 OMA:LVKTSMF PhylomeDB:Q99453
            GenomeRNAi:8929 NextBio:33574 Bgee:Q99453 CleanEx:HS_PHOX2B
            Genevestigator:Q99453 GermOnline:ENSG00000109132 GO:GO:0048894
            GO:GO:0021934 GO:GO:0021723 GO:GO:1901166 GO:GO:0060541
            GO:GO:0061452 Uniprot:Q99453
        Length = 314

 Score = 182 (69.1 bits), Expect = 7.7e-14, P = 7.7e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143


>MGI|MGI:1100882 [details] [associations]
            symbol:Phox2b "paired-like homeobox 2b" species:10090 "Mus
            musculus" [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000977
            "RNA polymerase II regulatory region sequence-specific DNA binding"
            evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding" evidence=ISO] [GO:0001764
            "neuron migration" evidence=IMP] [GO:0002087 "regulation of
            respiratory gaseous exchange by neurological system process"
            evidence=IMP] [GO:0003357 "noradrenergic neuron differentiation"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IMP] [GO:0010001 "glial cell differentiation"
            evidence=IMP] [GO:0021533 "cell differentiation in hindbrain"
            evidence=IMP] [GO:0021934 "hindbrain tangential cell migration"
            evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
            [GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IGI] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IGI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IDA]
            [GO:0048468 "cell development" evidence=IMP] [GO:0048483 "autonomic
            nervous system development" evidence=ISO] [GO:0048484 "enteric
            nervous system development" evidence=IMP] [GO:0048485 "sympathetic
            nervous system development" evidence=IMP] [GO:0048486
            "parasympathetic nervous system development" evidence=IMP]
            [GO:0048839 "inner ear development" evidence=IMP] [GO:0048894
            "efferent axon development in a lateral line nerve" evidence=IMP]
            [GO:0060541 "respiratory system development" evidence=IMP]
            [GO:0061452 "retrotrapezoid nucleus neuron differentiation"
            evidence=IMP] [GO:0071542 "dopaminergic neuron differentiation"
            evidence=IMP] [GO:0071773 "cellular response to BMP stimulus"
            evidence=IDA] [GO:1901166 "neural crest cell migration involved in
            autonomic nervous system development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:1100882 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
            GO:GO:0071542 GO:GO:0045944 GO:GO:0045665 GO:GO:0002087
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790
            GO:GO:0071773 GO:GO:0045666 GO:GO:0048839 GO:GO:0035914
            GO:GO:0048485 GO:GO:0000977 GO:GO:0048484 GO:GO:0048486
            GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
            GeneTree:ENSGT00700000104256 eggNOG:NOG301263 HOGENOM:HOG000013060
            KO:K09330 CTD:8929 HOVERGEN:HBG094678 OMA:LVKTSMF GO:GO:0048894
            GO:GO:0021934 GO:GO:0021723 GO:GO:1901166 GO:GO:0060541
            GO:GO:0061452 EMBL:Y14493 EMBL:AB015672 EMBL:BC079610
            IPI:IPI00132995 RefSeq:NP_032914.1 UniGene:Mm.62505
            ProteinModelPortal:O35690 SMR:O35690 STRING:O35690
            PhosphoSite:O35690 PRIDE:O35690 Ensembl:ENSMUST00000012664
            GeneID:18935 KEGG:mmu:18935 UCSC:uc008xpm.1 InParanoid:O35690
            NextBio:295256 Bgee:O35690 CleanEx:MM_PHOX2B Genevestigator:O35690
            GermOnline:ENSMUSG00000012520 Uniprot:O35690
        Length = 314

 Score = 182 (69.1 bits), Expect = 7.7e-14, P = 7.7e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143


>UNIPROTKB|F2Z3R9 [details] [associations]
            symbol:Phox2b "Protein Phox2b" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1560582 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
            OMA:LVKTSMF IPI:IPI00359254 ProteinModelPortal:F2Z3R9 SMR:F2Z3R9
            Ensembl:ENSRNOT00000003136 Uniprot:F2Z3R9
        Length = 314

 Score = 182 (69.1 bits), Expect = 7.7e-14, P = 7.7e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143


>UNIPROTKB|E1BME7 [details] [associations]
            symbol:PHOX2B "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:1901166 "neural crest cell migration involved in
            autonomic nervous system development" evidence=IEA] [GO:0071773
            "cellular response to BMP stimulus" evidence=IEA] [GO:0071542
            "dopaminergic neuron differentiation" evidence=IEA] [GO:0061452
            "retrotrapezoid nucleus neuron differentiation" evidence=IEA]
            [GO:0060541 "respiratory system development" evidence=IEA]
            [GO:0048894 "efferent axon development in a lateral line nerve"
            evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
            [GO:0048486 "parasympathetic nervous system development"
            evidence=IEA] [GO:0048485 "sympathetic nervous system development"
            evidence=IEA] [GO:0048484 "enteric nervous system development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IEA] [GO:0021934 "hindbrain tangential cell migration"
            evidence=IEA] [GO:0021723 "medullary reticular formation
            development" evidence=IEA] [GO:0021533 "cell differentiation in
            hindbrain" evidence=IEA] [GO:0010001 "glial cell differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0003360 "brainstem development"
            evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
            evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
            exchange by neurological system process" evidence=IEA] [GO:0001764
            "neuron migration" evidence=IEA] [GO:0000978 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0001764 GO:GO:0008285 GO:GO:0045944
            GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 GO:GO:0048839
            GO:GO:0000977 GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
            GeneTree:ENSGT00700000104256 KO:K09330 CTD:8929 OMA:LVKTSMF
            GO:GO:0048894 GO:GO:0021934 EMBL:DAAA02017501 IPI:IPI01002460
            RefSeq:XP_002688259.1 UniGene:Bt.46280 Ensembl:ENSBTAT00000061286
            GeneID:783703 KEGG:bta:783703 NextBio:20926255 Uniprot:E1BME7
        Length = 315

 Score = 182 (69.1 bits), Expect = 7.8e-14, P = 7.8e-14
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143


>ZFIN|ZDB-GENE-000223-14 [details] [associations]
            symbol:phox2a "paired-like homeobox 2a" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007420 "brain development" evidence=IGI] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000223-14 GO:GO:0005634
            GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104256 EMBL:CU633849
            IPI:IPI00511129 Ensembl:ENSDART00000002384 Bgee:F1RCT9
            Uniprot:F1RCT9
        Length = 280

 Score = 179 (68.1 bits), Expect = 8.8e-14, P = 8.8e-14
 Identities = 36/53 (67%), Positives = 42/53 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             G+  KRKQRR RTTFTS+QL+ELE+ F  +HYPDIYTRE LA K  +TE RVQ
Sbjct:    85 GLNEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 137


>UNIPROTKB|E1BA64 [details] [associations]
            symbol:ALX4 "Homeobox protein aristaless-like 4"
            species:9913 "Bos taurus" [GO:0071837 "HMG box domain binding"
            evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0048565 "digestive tract development" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0042981 "regulation of apoptotic process"
            evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
            evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0007517 "muscle organ development"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001942 "hair
            follicle development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 UniGene:Bt.47446
            EMBL:DAAA02041507 EMBL:DAAA02041508 EMBL:DAAA02041509
            EMBL:DAAA02041510 IPI:IPI01001526 Ensembl:ENSBTAT00000047360
            Uniprot:E1BA64
        Length = 246

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 37/65 (56%), Positives = 48/65 (73%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S ++ +D+ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   186 SPMEKADSESNKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLT 240

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   241 EARVQ 245


>UNIPROTKB|F1NMR7 [details] [associations]
            symbol:F1NMR7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0002087 "regulation of respiratory gaseous exchange by
            neurological system process" evidence=IEA] [GO:0003357
            "noradrenergic neuron differentiation" evidence=IEA] [GO:0003360
            "brainstem development" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0010001 "glial
            cell differentiation" evidence=IEA] [GO:0021533 "cell
            differentiation in hindbrain" evidence=IEA] [GO:0021723 "medullary
            reticular formation development" evidence=IEA] [GO:0021934
            "hindbrain tangential cell migration" evidence=IEA] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048484 "enteric
            nervous system development" evidence=IEA] [GO:0048485 "sympathetic
            nervous system development" evidence=IEA] [GO:0048486
            "parasympathetic nervous system development" evidence=IEA]
            [GO:0048839 "inner ear development" evidence=IEA] [GO:0048894
            "efferent axon development in a lateral line nerve" evidence=IEA]
            [GO:0060541 "respiratory system development" evidence=IEA]
            [GO:0061452 "retrotrapezoid nucleus neuron differentiation"
            evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
            evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
            evidence=IEA] [GO:1901166 "neural crest cell migration involved in
            autonomic nervous system development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            SMART:SM00389 GO:GO:0008285 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0071773
            GO:GO:0000977 GeneTree:ENSGT00700000104256 EMBL:AADN02031232
            EMBL:AADN02031233 IPI:IPI00818260 Ensembl:ENSGALT00000037449
            Uniprot:F1NMR7
        Length = 116

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 36/52 (69%), Positives = 41/52 (78%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRV 142
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE RV
Sbjct:    65 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARV 116


>ZFIN|ZDB-GENE-050208-140 [details] [associations]
            symbol:alx4b "aristaless-like homeobox 4b"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-050208-140 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 HOVERGEN:HBG004214 eggNOG:NOG309608
            OrthoDB:EOG4ZGPCG EMBL:BC135029 IPI:IPI00639059
            RefSeq:NP_001082826.1 UniGene:Dr.90982 ProteinModelPortal:A4IGC5
            SMR:A4IGC5 GeneID:497424 KEGG:dre:497424 CTD:497424
            NextBio:20866003 Uniprot:A4IGC5
        Length = 364

 Score = 182 (69.1 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 39/65 (60%), Positives = 47/65 (72%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S LD S+ ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   157 SALDKSEAESNKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLT 211

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   212 EARVQ 216


>RGD|1310201 [details] [associations]
            symbol:Alx4 "ALX homeobox 4" species:10116 "Rattus norvegicus"
            [GO:0001942 "hair follicle development" evidence=ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA;ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
            evidence=ISO] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0007389 "pattern
            specification process" evidence=ISO] [GO:0007517 "muscle organ
            development" evidence=ISO] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009791 "post-embryonic development" evidence=ISO]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=ISO] [GO:0035108 "limb morphogenesis" evidence=ISO]
            [GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISO]
            [GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
            [GO:0042981 "regulation of apoptotic process" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0046982 "protein
            heterodimerization activity" evidence=ISO] [GO:0048565 "digestive
            tract development" evidence=ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
            morphogenesis" evidence=ISO] [GO:0060021 "palate development"
            evidence=ISO] [GO:0071837 "HMG box domain binding" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            RGD:1310201 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00563344
            Ensembl:ENSRNOT00000047661 UCSC:RGD:1310201 Uniprot:D4A4C2
        Length = 324

 Score = 180 (68.4 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S L+ +D+ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   188 SPLEKTDSESSKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLT 242

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   243 EARVQ 247


>UNIPROTKB|O93582 [details] [associations]
            symbol:Alx-4 "Paired type homeodomain protein" species:9031
            "Gallus gallus" [GO:0001942 "hair follicle development"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0007517 "muscle
            organ development" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0035115 "embryonic forelimb
            morphogenesis" evidence=IEA] [GO:0035116 "embryonic hindlimb
            morphogenesis" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0042981 "regulation of apoptotic
            process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
            tract development" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0071837 "HMG box domain binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0042981 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0005667 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GeneTree:ENSGT00700000104013 CTD:60529
            HOVERGEN:HBG004214 KO:K09451 eggNOG:NOG309608 OMA:KFQPQPS
            OrthoDB:EOG4ZGPCG HSSP:P06601 EMBL:AADN02033349 EMBL:AADN02033350
            EMBL:AADN02033351 EMBL:AADN02033352 EMBL:AF092538 IPI:IPI00588188
            RefSeq:NP_989493.1 UniGene:Gga.934 SMR:O93582 STRING:O93582
            Ensembl:ENSGALT00000013020 GeneID:373976 KEGG:gga:373976
            InParanoid:O93582 NextBio:20813505 Uniprot:O93582
        Length = 387

 Score = 182 (69.1 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S +D +D+ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   178 SPMDKADSESNKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLT 232

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   233 EARVQ 237


>UNIPROTKB|J9P4I3 [details] [associations]
            symbol:PAX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001523
            InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS51057
            SMART:SM00351 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            SUPFAM:SSF46689 GeneTree:ENSGT00680000099553 EMBL:AAEX03009276
            Ensembl:ENSCAFT00000043115 Uniprot:J9P4I3
        Length = 139

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 41/89 (46%), Positives = 54/89 (60%)

Query:     1 MAAAGVRPCVISRQLR--------------VSHGCVSKILNRYQETGSIRPGVIGGSKPR 46
             +A +G+RPC ISR L+              VS+GCVSKIL RY  TG + P  IGGSKPR
Sbjct:    27 LAVSGMRPCDISRSLKTLLGSGMGIFRHSKVSNGCVSKILARYYRTGVLEPKGIGGSKPR 86

Query:    47 VATPDVEKRIEEYKKTNPNITSWEVRDKL 75
             +ATP V  RI + K   P + +WE++ +L
Sbjct:    87 LATPPVVARIAQLKGECPALFAWEIQRQL 115


>MGI|MGI:108359 [details] [associations]
            symbol:Alx4 "aristaless-like homeobox 4" species:10090 "Mus
            musculus" [GO:0001942 "hair follicle development" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
            factor complex" evidence=IDA;IPI] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IGI]
            [GO:0007517 "muscle organ development" evidence=IMP] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0009952
            "anterior/posterior pattern specification" evidence=IGI;IMP]
            [GO:0035108 "limb morphogenesis" evidence=IGI;IMP] [GO:0035115
            "embryonic forelimb morphogenesis" evidence=IGI] [GO:0035116
            "embryonic hindlimb morphogenesis" evidence=IGI] [GO:0042733
            "embryonic digit morphogenesis" evidence=IGI;IMP] [GO:0042981
            "regulation of apoptotic process" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI;IDA] [GO:0046982 "protein heterodimerization activity"
            evidence=IPI] [GO:0048565 "digestive tract development"
            evidence=IMP] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
            evidence=IMP] [GO:0060021 "palate development" evidence=IGI]
            [GO:0071837 "HMG box domain binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:108359 GO:GO:0042981 GO:GO:0009952 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009791 GO:GO:0001942
            GO:GO:0007517 GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518
            GO:GO:0048704 GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GeneTree:ENSGT00700000104013 CTD:60529
            HOVERGEN:HBG004214 KO:K09451 eggNOG:NOG309608 OMA:KFQPQPS
            OrthoDB:EOG4ZGPCG GO:GO:0048565 GO:GO:0042733 EMBL:AF001465
            IPI:IPI00127559 PIR:JC6522 RefSeq:NP_031468.1 UniGene:Mm.389389
            ProteinModelPortal:O35137 SMR:O35137 STRING:O35137
            PhosphoSite:O35137 PRIDE:O35137 Ensembl:ENSMUST00000042078
            GeneID:11695 KEGG:mmu:11695 InParanoid:O35137 NextBio:279357
            Bgee:O35137 CleanEx:MM_ALX4 Genevestigator:O35137
            GermOnline:ENSMUSG00000040310 Uniprot:O35137
        Length = 399

 Score = 180 (68.4 bits), Expect = 2.9e-13, P = 2.9e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S L+ +D+ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   188 SPLEKTDSESNKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLT 242

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   243 EARVQ 247


>UNIPROTKB|Q9H161 [details] [associations]
            symbol:ALX4 "Homeobox protein aristaless-like 4"
            species:9606 "Homo sapiens" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0007517 "muscle
            organ development" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0035115 "embryonic forelimb
            morphogenesis" evidence=IEA] [GO:0035116 "embryonic hindlimb
            morphogenesis" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0042981 "regulation of apoptotic
            process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
            tract development" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0071837 "HMG box domain binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
            "nucleus" evidence=IDA;NAS] [GO:0001501 "skeletal system
            development" evidence=NAS] [GO:0001942 "hair follicle development"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0042981 GO:GO:0009952
            GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0009791 GO:GO:0001942 GO:GO:0001501 GO:GO:0007517
            GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704
            GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            CTD:60529 HOVERGEN:HBG004214 KO:K09451 EMBL:AF294629 EMBL:AF308822
            EMBL:AF308823 EMBL:AF308824 EMBL:AF308825 EMBL:AJ404888
            EMBL:AJ279074 EMBL:AJ279075 EMBL:AJ279076 EMBL:AJ279077
            EMBL:AB058691 IPI:IPI00334769 RefSeq:NP_068745.2 UniGene:Hs.436055
            PDB:2M0C PDBsum:2M0C ProteinModelPortal:Q9H161 SMR:Q9H161
            STRING:Q9H161 PhosphoSite:Q9H161 DMDM:254763249 PaxDb:Q9H161
            PRIDE:Q9H161 DNASU:60529 Ensembl:ENST00000329255 GeneID:60529
            KEGG:hsa:60529 UCSC:uc001myb.3 GeneCards:GC11M044238 HGNC:HGNC:450
            MIM:601224 MIM:605420 MIM:609597 MIM:613451 neXtProt:NX_Q9H161
            Orphanet:228390 Orphanet:60015 Orphanet:52022 PharmGKB:PA24755
            eggNOG:NOG309608 InParanoid:Q9H161 OMA:KFQPQPS OrthoDB:EOG4ZGPCG
            PhylomeDB:Q9H161 GenomeRNAi:60529 NextBio:65433 Bgee:Q9H161
            CleanEx:HS_ALX4 Genevestigator:Q9H161 GermOnline:ENSG00000052850
            GO:GO:0048565 GO:GO:0042733 Uniprot:Q9H161
        Length = 411

 Score = 180 (68.4 bits), Expect = 3.1e-13, P = 3.1e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S L+ +D+ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   200 SPLEKADSESNKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLT 254

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   255 EARVQ 259


>UNIPROTKB|E2RLA0 [details] [associations]
            symbol:ALX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071837 "HMG box domain binding"
            evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0048565 "digestive tract development" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0042981 "regulation of apoptotic process"
            evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
            evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0007517 "muscle organ development"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001942 "hair
            follicle development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0042981 GO:GO:0009952
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009791 GO:GO:0001942
            GO:GO:0007517 GO:GO:0035116 GO:GO:0035115 GO:GO:0048704
            GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104013 CTD:60529 KO:K09451 OMA:KFQPQPS
            GO:GO:0048565 GO:GO:0042733 EMBL:AAEX03011521 RefSeq:XP_850737.1
            Ensembl:ENSCAFT00000015028 GeneID:609979 KEGG:cfa:609979
            NextBio:20895553 Uniprot:E2RLA0
        Length = 414

 Score = 180 (68.4 bits), Expect = 3.2e-13, P = 3.2e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S L+ +D+ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   203 SPLEKADSESNKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLT 257

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   258 EARVQ 262


>UNIPROTKB|F1SMS6 [details] [associations]
            symbol:RAX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0021854 "hypothalamus development"
            evidence=IEA] [GO:0007389 "pattern specification process"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
            GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
            OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
        Length = 347

 Score = 178 (67.7 bits), Expect = 3.2e-13, P = 3.2e-13
 Identities = 42/106 (39%), Positives = 59/106 (55%)

Query:    41 GGSKPRVATPDVEKRIEEYKKTN---PNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRK 97
             G ++P  + P    R  EY+      P  T    R   + V     SD++       K+K
Sbjct:    79 GSAEP--SPPPAPARAPEYEDPRSYCPKETGEAQRSPGLPVGPAAPSDSKLSEEEQPKKK 136

Query:    98 QRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
              RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   137 HRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 182


>WB|WBGene00000440 [details] [associations]
            symbol:ceh-17 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;TAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP]
            [GO:0030516 "regulation of axon extension" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0007411 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030516
            GeneTree:ENSGT00700000104279 InterPro:IPR022135 Pfam:PF12413
            HSSP:P06601 KO:K09330 EMBL:FO080863 EMBL:AF272397 PIR:T30920
            RefSeq:NP_491393.1 UniGene:Cel.19455 SMR:G5EC89 IntAct:G5EC89
            EnsemblMetazoa:D1007.1 GeneID:172059 KEGG:cel:CELE_D1007.1
            CTD:172059 WormBase:D1007.1 OMA:CETHYPD NextBio:873845
            Uniprot:G5EC89
        Length = 237

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 33/49 (67%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             +RKQRR RTTFTS QL+ELE+SF  +HYPDIYTRE +A +  +TE RVQ
Sbjct:   146 RRKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQ 194


>UNIPROTKB|G5EC89 [details] [associations]
            symbol:ceh-17 "CEH-17" species:6239 "Caenorhabditis
            elegans" [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0007411 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030516
            GeneTree:ENSGT00700000104279 InterPro:IPR022135 Pfam:PF12413
            HSSP:P06601 KO:K09330 EMBL:FO080863 EMBL:AF272397 PIR:T30920
            RefSeq:NP_491393.1 UniGene:Cel.19455 SMR:G5EC89 IntAct:G5EC89
            EnsemblMetazoa:D1007.1 GeneID:172059 KEGG:cel:CELE_D1007.1
            CTD:172059 WormBase:D1007.1 OMA:CETHYPD NextBio:873845
            Uniprot:G5EC89
        Length = 237

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 33/49 (67%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             +RKQRR RTTFTS QL+ELE+SF  +HYPDIYTRE +A +  +TE RVQ
Sbjct:   146 RRKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQ 194


>ZFIN|ZDB-GENE-070216-1 [details] [associations]
            symbol:otpa "orthopedia homolog a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0021884 "forebrain neuron development"
            evidence=IGI;IMP] [GO:0007632 "visual behavior" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070216-1 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
            GO:GO:0000976 GO:GO:0021884 eggNOG:NOG256838 HOVERGEN:HBG001617
            OrthoDB:EOG4FXR8D HOGENOM:HOG000039976 OMA:RWATAGM EMBL:CU459136
            EMBL:BC162329 EMBL:BC162331 IPI:IPI00484790 RefSeq:NP_001122175.1
            UniGene:Dr.87162 STRING:B3DGA5 Ensembl:ENSDART00000027268
            GeneID:560759 KEGG:dre:560759 CTD:560759 NextBio:20883602
            Uniprot:B3DGA5
        Length = 332

 Score = 160 (61.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
 Identities = 30/48 (62%), Positives = 39/48 (81%)

Query:    96 RKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             +KQ+R RT FT AQL ELE+SF ++HYPDI+ RE LA + G+TE+RVQ
Sbjct:   112 QKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 159

 Score = 35 (17.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query:    41 GGSKPRVATPDVEKRIEEYKKTNPNITSWEVRDK 74
             G + P VA    ++  ++ ++ NP  +S +   K
Sbjct:    80 GSNPPGVAVNSKDQEKQQQQQQNPTQSSSQQSQK 113


>UNIPROTKB|Q4LAL6 [details] [associations]
            symbol:ALX4 "Homeobox protein aristaless-like 4"
            species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AM048630
            IPI:IPI00714667 RefSeq:NP_001025475.1 UniGene:Bt.47446
            ProteinModelPortal:Q4LAL6 SMR:Q4LAL6 PRIDE:Q4LAL6 GeneID:594846
            KEGG:bta:594846 CTD:60529 HOVERGEN:HBG004214 KO:K09451
            NextBio:20892408 Uniprot:Q4LAL6
        Length = 397

 Score = 178 (67.7 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 37/65 (56%), Positives = 48/65 (73%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S ++ +D+ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   186 SPMEKADSESNKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLT 240

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   241 EARVQ 245


>ZFIN|ZDB-GENE-990415-236 [details] [associations]
            symbol:rx1 "retinal homeobox gene 1" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0010842 "retina layer formation" evidence=IMP]
            [GO:0003407 "neural retina development" evidence=IMP] [GO:0060219
            "camera-type eye photoreceptor cell differentiation"
            evidence=IGI;IMP] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-990415-236 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010842
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104256 GO:GO:0060219 HOVERGEN:HBG021349
            KO:K09332 EMBL:CR936300 OMA:MVDDSCL EMBL:BC060890 IPI:IPI00481573
            RefSeq:NP_571300.2 UniGene:Dr.75761 SMR:Q6P984 STRING:Q6P984
            Ensembl:ENSDART00000106166 GeneID:30472 KEGG:dre:30472 CTD:30472
            InParanoid:Q6P984 NextBio:20806865 Uniprot:Q6P984
        Length = 330

 Score = 175 (66.7 bits), Expect = 5.8e-13, P = 5.8e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)

Query:    75 LIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANK 134
             L K    D    +S  G   K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K
Sbjct:   114 LRKAIESDSKSPDSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMK 173

Query:   135 FGMTETRVQ 143
               + E RVQ
Sbjct:   174 VNLPEVRVQ 182


>UNIPROTKB|E2QW59 [details] [associations]
            symbol:RAX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104256 EMBL:AAEX03000108 EMBL:AAEX03000109
            Ensembl:ENSCAFT00000000155 Uniprot:E2QW59
        Length = 331

 Score = 175 (66.7 bits), Expect = 5.9e-13, P = 5.9e-13
 Identities = 31/54 (57%), Positives = 43/54 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQQFVLG 148
             K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ ++ G
Sbjct:   133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQPYLKG 186


>WB|WBGene00044330 [details] [associations]
            symbol:alr-1 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG313402 KO:K09452
            GeneTree:ENSGT00700000104279 HSSP:P06601 EMBL:Z68008 PIR:T24046
            RefSeq:NP_509860.1 ProteinModelPortal:Q21836 SMR:Q21836
            STRING:Q21836 EnsemblMetazoa:R08B4.2 GeneID:181302
            KEGG:cel:CELE_R08B4.2 UCSC:R08B4.2 CTD:181302 WormBase:R08B4.2
            HOGENOM:HOG000021099 InParanoid:Q21836 OMA:ERSSTHH NextBio:913362
            Uniprot:Q21836
        Length = 362

 Score = 176 (67.0 bits), Expect = 6.1e-13, P = 6.1e-13
 Identities = 41/91 (45%), Positives = 53/91 (58%)

Query:    53 EKRIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEE 112
             E + ++ KKT       E    L        SD  + P    KRKQRR RTTF++ QL+E
Sbjct:    72 ELKEDDGKKTPTGDNILEAASVLDNRENGSPSDGTNSPDDNGKRKQRRYRTTFSAFQLDE 131

Query:   113 LEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             LEK F R+HYPD++TRE LA +  +TE RVQ
Sbjct:   132 LEKVFARTHYPDVFTREELATRVQLTEARVQ 162


>ZFIN|ZDB-GENE-070712-3 [details] [associations]
            symbol:alx4a "aristaless-like homeobox 4a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-070712-3 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104013 KO:K09451 EMBL:BX510305
            IPI:IPI00800494 RefSeq:XP_001340966.1 UniGene:Dr.115666
            Ensembl:ENSDART00000124363 GeneID:100006399 KEGG:dre:100006399
            CTD:100006399 NextBio:20787094 Uniprot:E7FGP3
        Length = 368

 Score = 176 (67.0 bits), Expect = 6.4e-13, P = 6.4e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S LD ++ ES  G     K+RR+RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   161 SPLDKTEGESNKG-----KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLT 215

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   216 EARVQ 220


>FB|FBgn0025334 [details] [associations]
            symbol:PHDP "Putative homeodomain protein" species:7227
            "Drosophila melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
            GeneTree:ENSGT00700000104256 FlyBase:FBgn0025334 EMBL:BT028839
            RefSeq:NP_523834.1 UniGene:Dm.5689 SMR:Q9W1H7 IntAct:Q9W1H7
            MINT:MINT-1561397 STRING:Q9W1H7 EnsemblMetazoa:FBtr0072224
            GeneID:37788 KEGG:dme:Dmel_CG11182 UCSC:CG11182-RA CTD:37788
            InParanoid:Q9W1H7 OMA:YKLRANE GenomeRNAi:37788 NextBio:805410
            Uniprot:Q9W1H7
        Length = 220

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 34/49 (69%), Positives = 38/49 (77%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K KQRR RTTFTS QL ELEK F  +HYPDIYTRE +A+K  +TE RVQ
Sbjct:   109 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQ 157


>MGI|MGI:109632 [details] [associations]
            symbol:Rax "retina and anterior neural fold homeobox"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IMP] [GO:0007420 "brain development"
            evidence=IMP] [GO:0021854 "hypothalamus development" evidence=IMP]
            [GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
            development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:109632 GO:GO:0005634 EMBL:CH466528
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0043010 HOGENOM:HOG000231518
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
            GO:GO:0060173 eggNOG:NOG261733 GO:GO:0021854
            GeneTree:ENSGT00700000104256 CleanEx:MM_RAX HOVERGEN:HBG021349
            OrthoDB:EOG4V4387 CTD:30062 KO:K09332 OMA:CGPGFGD ChiTaRS:RAX
            EMBL:AF001906 EMBL:U73177 EMBL:BC024731 EMBL:BC058757
            IPI:IPI00132598 RefSeq:NP_038861.2 UniGene:Mm.489746
            ProteinModelPortal:O35602 SMR:O35602 STRING:O35602
            PhosphoSite:O35602 PRIDE:O35602 Ensembl:ENSMUST00000025396
            GeneID:19434 KEGG:mmu:19434 InParanoid:Q6GT92 NextBio:296571
            Bgee:O35602 Genevestigator:O35602 GermOnline:ENSMUSG00000024518
            Uniprot:O35602
        Length = 342

 Score = 174 (66.3 bits), Expect = 8.5e-13, P = 8.5e-13
 Identities = 45/108 (41%), Positives = 61/108 (56%)

Query:    41 GGSKPRVATPDVEKRIEEYKKTNPNITS--WEVRDKL-IKVSRL--DDSDTESEPGIVLK 95
             GGS+   + P     + EY+ T P       E R    + V     D   +E EP    K
Sbjct:    79 GGSES--SPPAAPGFVPEYEATRPCYPKEQGEARPSPGLSVGPAAGDSKLSEEEPP---K 133

Query:    96 RKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             +K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   134 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181


>UNIPROTKB|G3V5W7 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
            sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
            "RNA polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
            polymerase II transcription factor activity" evidence=IEA]
            [GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
            "neuron migration" evidence=IEA] [GO:0002052 "positive regulation
            of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
            development in camera-type eye" evidence=IEA] [GO:0003322
            "pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
            binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
            "salivary gland morphogenesis" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0009950
            "dorsal/ventral axis specification" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
            cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
            regionalization" evidence=IEA] [GO:0021797 "forebrain
            anterior/posterior pattern specification" evidence=IEA] [GO:0021798
            "forebrain dorsal/ventral pattern formation" evidence=IEA]
            [GO:0021902 "commitment of neuronal cell to specific neuron type in
            forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
            formation" evidence=IEA] [GO:0021912 "regulation of transcription
            from RNA polymerase II promoter involved in spinal cord motor
            neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
            transcription from RNA polymerase II promoter involved in ventral
            spinal cord interneuron specification" evidence=IEA] [GO:0021918
            "regulation of transcription from RNA polymerase II promoter
            involved in somatic motor neuron fate commitment" evidence=IEA]
            [GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0030334 "regulation of cell migration"
            evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
            differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0032808 "lacrimal gland development"
            evidence=IEA] [GO:0033365 "protein localization to organelle"
            evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
            evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
            evidence=IEA] [GO:0042660 "positive regulation of cell fate
            specification" evidence=IEA] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048505 "regulation of timing of cell
            differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
            eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
            differentiation" evidence=IEA] [GO:0050680 "negative regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
            binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
            GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
            GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
            GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
            GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
            GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
            GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
            GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
            GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
            ProteinModelPortal:G3V5W7 SMR:G3V5W7 Ensembl:ENST00000531910
            ArrayExpress:G3V5W7 Bgee:G3V5W7 Uniprot:G3V5W7
        Length = 162

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 32/62 (51%), Positives = 46/62 (74%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R
Sbjct:    59 EDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEAR 117

Query:   142 VQ 143
             +Q
Sbjct:   118 IQ 119


>ZFIN|ZDB-GENE-990415-237 [details] [associations]
            symbol:rx2 "retinal homeobox gene 2" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0060219 "camera-type eye photoreceptor cell differentiation"
            evidence=IGI] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-990415-237 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 eggNOG:NOG261733 GO:GO:0060219 HOVERGEN:HBG021349
            OrthoDB:EOG4V4387 KO:K09332 EMBL:AF001908 IPI:IPI00483924
            RefSeq:NP_571301.1 UniGene:Dr.75762 ProteinModelPortal:O42357
            SMR:O42357 STRING:O42357 GeneID:30473 KEGG:dre:30473 CTD:30473
            InParanoid:O42357 NextBio:20806866 ArrayExpress:O42357
            Uniprot:O42357
        Length = 327

 Score = 173 (66.0 bits), Expect = 9.5e-13, P = 9.5e-13
 Identities = 35/65 (53%), Positives = 46/65 (70%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             SR  D   E +P    K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + 
Sbjct:   120 SRSPDIPDEDQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLP 175

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   176 EVRVQ 180


>ZFIN|ZDB-GENE-050419-191 [details] [associations]
            symbol:alx1 "ALX homeobox 1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IMP]
            [GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-050419-191 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
            EMBL:BX649507 IPI:IPI00619192 Ensembl:ENSDART00000091244
            Uniprot:F1QTN5
        Length = 321

 Score = 172 (65.6 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 34/51 (66%), Positives = 40/51 (78%)

Query:    93 VLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             V   K+RR RTTFTSAQLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   116 VSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQ 166


>UNIPROTKB|Q9I9A0 [details] [associations]
            symbol:phox2b "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0002087 "regulation of respiratory gaseous exchange by
            neurological system process" evidence=IEA] [GO:0003357
            "noradrenergic neuron differentiation" evidence=IEA] [GO:0003360
            "brainstem development" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0010001 "glial
            cell differentiation" evidence=IEA] [GO:0021533 "cell
            differentiation in hindbrain" evidence=IEA] [GO:0021723 "medullary
            reticular formation development" evidence=IEA] [GO:0021934
            "hindbrain tangential cell migration" evidence=IEA] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048484 "enteric
            nervous system development" evidence=IEA] [GO:0048485 "sympathetic
            nervous system development" evidence=IEA] [GO:0048486
            "parasympathetic nervous system development" evidence=IEA]
            [GO:0048839 "inner ear development" evidence=IEA] [GO:0048894
            "efferent axon development in a lateral line nerve" evidence=IEA]
            [GO:0060541 "respiratory system development" evidence=IEA]
            [GO:0061452 "retrotrapezoid nucleus neuron differentiation"
            evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
            evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
            evidence=IEA] [GO:1901166 "neural crest cell migration involved in
            autonomic nervous system development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            SMART:SM00389 GO:GO:0008285 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0071773
            GO:GO:0000977 HSSP:P06601 GeneTree:ENSGT00700000104256
            eggNOG:NOG301263 HOGENOM:HOG000013060 OrthoDB:EOG4N30PS
            EMBL:AADN02031232 EMBL:AADN02031233 EMBL:AJ251458 IPI:IPI00821438
            UniGene:Gga.10503 STRING:Q9I9A0 Ensembl:ENSGALT00000023046
            HOVERGEN:HBG070114 InParanoid:Q9I9A0 Uniprot:Q9I9A0
        Length = 119

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/49 (69%), Positives = 39/49 (79%)

Query:    91 GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTE 139
             G+  KRKQRR RTTFTSAQL+ELE+ F  +HYPDIYTRE LA K  +TE
Sbjct:    71 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTE 119


>UNIPROTKB|F2Z538 [details] [associations]
            symbol:F2Z538 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104279 EMBL:CU137739
            Ensembl:ENSSSCT00000006878 OMA:QSSRVWY Uniprot:F2Z538
        Length = 145

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 31/50 (62%), Positives = 40/50 (80%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQQ 144
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQQ
Sbjct:    13 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQQ 62


>UNIPROTKB|E1BXC6 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
            gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
            "RNA polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
            polymerase II transcription factor activity" evidence=IEA]
            [GO:0001568 "blood vessel development" evidence=IEA] [GO:0001709
            "cell fate determination" evidence=IEA] [GO:0001764 "neuron
            migration" evidence=IEA] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
            development in camera-type eye" evidence=IEA] [GO:0003322
            "pancreatic A cell development" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007224 "smoothened signaling
            pathway" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
            [GO:0007435 "salivary gland morphogenesis" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0009611 "response to wounding" evidence=IEA] [GO:0009950
            "dorsal/ventral axis specification" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
            cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
            regionalization" evidence=IEA] [GO:0021797 "forebrain
            anterior/posterior pattern specification" evidence=IEA] [GO:0021798
            "forebrain dorsal/ventral pattern formation" evidence=IEA]
            [GO:0021902 "commitment of neuronal cell to specific neuron type in
            forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
            formation" evidence=IEA] [GO:0021912 "regulation of transcription
            from RNA polymerase II promoter involved in spinal cord motor
            neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
            transcription from RNA polymerase II promoter involved in ventral
            spinal cord interneuron specification" evidence=IEA] [GO:0021918
            "regulation of transcription from RNA polymerase II promoter
            involved in somatic motor neuron fate commitment" evidence=IEA]
            [GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0030334 "regulation of cell migration"
            evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
            differentiation" evidence=IEA] [GO:0031625 "ubiquitin protein
            ligase binding" evidence=IEA] [GO:0032808 "lacrimal gland
            development" evidence=IEA] [GO:0033365 "protein localization to
            organelle" evidence=IEA] [GO:0035035 "histone acetyltransferase
            binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
            development" evidence=IEA] [GO:0042593 "glucose homeostasis"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048505 "regulation of timing of cell differentiation"
            evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
            evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
            [GO:0050680 "negative regulation of epithelial cell proliferation"
            evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
            [GO:0061303 "cornea development in camera-type eye" evidence=IEA]
            [GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0070412 "R-SMAD
            binding" evidence=IEA] [GO:0071837 "HMG box domain binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005737 GO:GO:0009611 GO:GO:0045944
            GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
            GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0050680
            GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
            GO:GO:0023019 GO:GO:0048505 GeneTree:ENSGT00680000099553
            EMBL:AADN02040161 EMBL:AC140946 IPI:IPI00602476
            ProteinModelPortal:E1BXC6 SMR:E1BXC6 Ensembl:ENSGALT00000019804
            ArrayExpress:E1BXC6 Uniprot:E1BXC6
        Length = 286

 Score = 169 (64.5 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 32/62 (51%), Positives = 46/62 (74%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R
Sbjct:    59 EDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEAR 117

Query:   142 VQ 143
             +Q
Sbjct:   118 IQ 119


>UNIPROTKB|G3V4N4 [details] [associations]
            symbol:PAX6 "Paired box gene 6 (Aniridia, keratitis),
            isoform CRA_b" species:9606 "Homo sapiens" [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000979 "RNA polymerase II core
            promoter sequence-specific DNA binding" evidence=IEA] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=IEA] [GO:0001709 "cell fate
            determination" evidence=IEA] [GO:0001764 "neuron migration"
            evidence=IEA] [GO:0002052 "positive regulation of neuroblast
            proliferation" evidence=IEA] [GO:0002088 "lens development in
            camera-type eye" evidence=IEA] [GO:0003322 "pancreatic A cell
            development" evidence=IEA] [GO:0003680 "AT DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
            "salivary gland morphogenesis" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0009950
            "dorsal/ventral axis specification" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
            cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
            regionalization" evidence=IEA] [GO:0021797 "forebrain
            anterior/posterior pattern specification" evidence=IEA] [GO:0021798
            "forebrain dorsal/ventral pattern formation" evidence=IEA]
            [GO:0021902 "commitment of neuronal cell to specific neuron type in
            forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
            formation" evidence=IEA] [GO:0021912 "regulation of transcription
            from RNA polymerase II promoter involved in spinal cord motor
            neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
            transcription from RNA polymerase II promoter involved in ventral
            spinal cord interneuron specification" evidence=IEA] [GO:0021918
            "regulation of transcription from RNA polymerase II promoter
            involved in somatic motor neuron fate commitment" evidence=IEA]
            [GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0030334 "regulation of cell migration"
            evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
            differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0032808 "lacrimal gland development"
            evidence=IEA] [GO:0033365 "protein localization to organelle"
            evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
            evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
            evidence=IEA] [GO:0042660 "positive regulation of cell fate
            specification" evidence=IEA] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048505 "regulation of timing of cell
            differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
            eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
            differentiation" evidence=IEA] [GO:0050680 "negative regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
            binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 EMBL:CH471064
            GO:GO:0007435 GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0030334 GO:GO:0000790 GO:GO:0006366
            GO:GO:0000981 GO:GO:0033365 GO:GO:0021983 GO:GO:0050680
            GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
            GO:GO:0002052 GO:GO:0009950 GO:GO:0021797 GO:GO:0048596
            GO:GO:0023019 GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796
            GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
            GO:GO:0021905 GO:GO:0048708 GO:GO:0021912 GO:GO:0021902
            GO:GO:0021778 GO:GO:0003322 GO:GO:0021918 EMBL:Z95332
            UniGene:Hs.270303 UniGene:Hs.611376 HGNC:HGNC:8620 SMR:G3V4N4
            Ensembl:ENST00000470027 Ensembl:ENST00000494377 Uniprot:G3V4N4
        Length = 286

 Score = 169 (64.5 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 32/62 (51%), Positives = 46/62 (74%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R
Sbjct:    59 EDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEAR 117

Query:   142 VQ 143
             +Q
Sbjct:   118 IQ 119


>UNIPROTKB|Q9PVY0 [details] [associations]
            symbol:RX1 "Retinal homeobox protein Rx1" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 eggNOG:NOG261733 GeneTree:ENSGT00700000104256
            HOVERGEN:HBG021349 OrthoDB:EOG4V4387 EMBL:AB015750 EMBL:AF420601
            IPI:IPI00599352 RefSeq:NP_989435.2 UniGene:Gga.48437
            UniGene:Gga.55791 ProteinModelPortal:Q9PVY0 SMR:Q9PVY0 PRIDE:Q9PVY0
            Ensembl:ENSGALT00000032299 GeneID:373893 KEGG:gga:373893 CTD:30062
            InParanoid:Q9PVY0 KO:K09332 NextBio:20813425 ArrayExpress:Q9PVY0
            Uniprot:Q9PVY0
        Length = 228

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 30/49 (61%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:    33 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 81


>UNIPROTKB|F1P961 [details] [associations]
            symbol:ALX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060021 "palate development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0030326
            "embryonic limb morphogenesis" evidence=IEA] [GO:0014031
            "mesenchymal cell development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0001843 "neural tube closure"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0009952 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0005667 GO:GO:0000122 GO:GO:0030326 GO:GO:0001843 OMA:QLAMRTE
            GO:GO:0048704 GO:GO:0014031 GO:GO:0060021 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
            EMBL:AAEX03009903 ProteinModelPortal:F1P961
            Ensembl:ENSCAFT00000009642 Uniprot:F1P961
        Length = 252

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 33/51 (64%), Positives = 39/51 (76%)

Query:    93 VLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             V   K+RR RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:    53 VSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 103


>UNIPROTKB|E1BYW7 [details] [associations]
            symbol:DRGX "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001764 "neuron migration" evidence=IEA] [GO:0007411 "axon
            guidance" evidence=IEA] [GO:0009593 "detection of chemical
            stimulus" evidence=IEA] [GO:0016048 "detection of temperature
            stimulus" evidence=IEA] [GO:0021516 "dorsal spinal cord
            development" evidence=IEA] [GO:0021559 "trigeminal nerve
            development" evidence=IEA] [GO:0050954 "sensory perception of
            mechanical stimulus" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104013 GO:GO:0009593 GO:GO:0016048 CTD:644168
            OMA:KGSPLCS EMBL:AADN02027760 EMBL:AADN02027761 IPI:IPI00590363
            RefSeq:XP_001234656.2 Ensembl:ENSGALT00000010049 GeneID:771373
            KEGG:gga:771373 Uniprot:E1BYW7
        Length = 260

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTFT  QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78


>UNIPROTKB|G3V4M3 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 EMBL:Z83307 EMBL:Z95332 HGNC:HGNC:8620
            ProteinModelPortal:G3V4M3 SMR:G3V4M3 Ensembl:ENST00000531633
            ArrayExpress:G3V4M3 Bgee:G3V4M3 Uniprot:G3V4M3
        Length = 302

 Score = 169 (64.5 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 32/62 (51%), Positives = 46/62 (74%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +DSD E++  + LKRK +R+RT+FT  Q+E LEK F+R+HYPD++ RE LA K  + E R
Sbjct:    24 EDSD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEAR 82

Query:   142 VQ 143
             +Q
Sbjct:    83 IQ 84


>MGI|MGI:104621 [details] [associations]
            symbol:Alx1 "ALX homeobox 1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0001843 "neural tube
            closure" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
            "transcription factor complex" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0014031 "mesenchymal cell development"
            evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI;IDA]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
            [GO:0060021 "palate development" evidence=IGI] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:104621 GO:GO:0009952
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
            GO:GO:0030326 GO:GO:0001843 CTD:8092 eggNOG:NOG304827
            HOGENOM:HOG000231518 HOVERGEN:HBG050798 KO:K09334 OMA:QLAMRTE
            OrthoDB:EOG4G4GR5 GO:GO:0048704 GO:GO:0014031 GO:GO:0060021
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AK047846
            EMBL:AK086731 EMBL:BC052200 IPI:IPI00227026 RefSeq:NP_766141.1
            UniGene:Mm.19287 ProteinModelPortal:Q8C8B0 SMR:Q8C8B0 STRING:Q8C8B0
            PhosphoSite:Q8C8B0 PRIDE:Q8C8B0 Ensembl:ENSMUST00000040859
            Ensembl:ENSMUST00000167156 GeneID:216285 KEGG:mmu:216285
            UCSC:uc007gyg.1 GeneTree:ENSGT00700000104013 InParanoid:Q8C8B0
            NextBio:375099 Bgee:Q8C8B0 CleanEx:MM_ALX1 Genevestigator:Q8C8B0
            GermOnline:ENSMUSG00000036602 Uniprot:Q8C8B0
        Length = 326

 Score = 170 (64.9 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S LD+   + +   V   K+RR RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   114 SELDELGDKCDSN-VSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELT 172

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   173 EARVQ 177


>RGD|2273 [details] [associations]
            symbol:Alx1 "ALX homeobox 1" species:10116 "Rattus norvegicus"
          [GO:0000122 "negative regulation of transcription from RNA polymerase
          II promoter" evidence=IEA;ISO] [GO:0001501 "skeletal system
          development" evidence=TAS] [GO:0001843 "neural tube closure"
          evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
          transcription factor activity" evidence=ISO;IMP] [GO:0005634
          "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor
          complex" evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
          evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
          evidence=IEA;ISO] [GO:0014031 "mesenchymal cell development"
          evidence=IEA;ISO] [GO:0030326 "embryonic limb morphogenesis"
          evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
          evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
          DNA-dependent" evidence=ISO;ISS] [GO:0045944 "positive regulation of
          transcription from RNA polymerase II promoter" evidence=IEA;ISO]
          [GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
          [GO:0048704 "embryonic skeletal system morphogenesis"
          evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
          InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
          PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:2273 GO:GO:0005634
          GO:GO:0045893 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
          GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
          GO:GO:0000122 GO:GO:0030326 GO:GO:0001501 GO:GO:0001843 CTD:8092
          eggNOG:NOG304827 HOGENOM:HOG000231518 HOVERGEN:HBG050798 KO:K09334
          OMA:QLAMRTE OrthoDB:EOG4G4GR5 GO:GO:0048704 GO:GO:0014031
          GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
          GeneTree:ENSGT00700000104013 EMBL:L14018 IPI:IPI00205025 PIR:A47523
          RefSeq:NP_037053.1 UniGene:Rn.9282 ProteinModelPortal:Q63087
          SMR:Q63087 STRING:Q63087 PhosphoSite:Q63087 PRIDE:Q63087
          Ensembl:ENSRNOT00000006007 GeneID:25401 KEGG:rno:25401 UCSC:RGD:2273
          InParanoid:Q63087 NextBio:606493 ArrayExpress:Q63087
          Genevestigator:Q63087 GermOnline:ENSRNOG00000004390 Uniprot:Q63087
        Length = 326

 Score = 170 (64.9 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query:    79 SRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMT 138
             S LD+   + +   V   K+RR RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +T
Sbjct:   114 SELDELGDKCDSN-VSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELT 172

Query:   139 ETRVQ 143
             E RVQ
Sbjct:   173 EARVQ 177


>UNIPROTKB|F1NH36 [details] [associations]
            symbol:Gga.55791 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007389 "pattern specification process"
            evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
            [GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
            "limb development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104256 EMBL:AADN02057236 EMBL:AADN02063546
            IPI:IPI00822313 Ensembl:ENSGALT00000021906 OMA:MVDDSCL
            ArrayExpress:F1NH36 Uniprot:F1NH36
        Length = 262

 Score = 166 (63.5 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 30/49 (61%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:    67 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 115


>UNIPROTKB|E1BDA0 [details] [associations]
            symbol:DRGX "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954 "sensory
            perception of mechanical stimulus" evidence=IEA] [GO:0021559
            "trigeminal nerve development" evidence=IEA] [GO:0021516 "dorsal
            spinal cord development" evidence=IEA] [GO:0016048 "detection of
            temperature stimulus" evidence=IEA] [GO:0009593 "detection of
            chemical stimulus" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
            GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 CTD:644168 OMA:KGSPLCS
            EMBL:DAAA02062229 IPI:IPI00734128 RefSeq:XP_002699015.1
            Ensembl:ENSBTAT00000015907 GeneID:521995 KEGG:bta:521995
            NextBio:20873419 Uniprot:E1BDA0
        Length = 263

 Score = 166 (63.5 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTFT  QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78


>UNIPROTKB|A6NNA5 [details] [associations]
            symbol:DRGX "Dorsal root ganglia homeobox protein"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 EMBL:CH471187 EMBL:AC027674 IPI:IPI00060044
            UniGene:Hs.534530 ProteinModelPortal:A6NNA5 SMR:A6NNA5
            STRING:A6NNA5 PhosphoSite:A6NNA5 PRIDE:A6NNA5
            Ensembl:ENST00000374139 UCSC:uc021pqd.1 GeneCards:GC10M050573
            HGNC:HGNC:21536 HPA:HPA043978 MIM:606701 neXtProt:NX_A6NNA5
            eggNOG:NOG39948 HOVERGEN:HBG106743 InParanoid:A6NNA5
            OrthoDB:EOG49CQ88 PhylomeDB:A6NNA5 ArrayExpress:A6NNA5 Bgee:A6NNA5
            CleanEx:HS_DRGX Genevestigator:A6NNA5 Uniprot:A6NNA5
        Length = 263

 Score = 166 (63.5 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTFT  QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78


>UNIPROTKB|F1SDX7 [details] [associations]
            symbol:DRGX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954 "sensory
            perception of mechanical stimulus" evidence=IEA] [GO:0021559
            "trigeminal nerve development" evidence=IEA] [GO:0021516 "dorsal
            spinal cord development" evidence=IEA] [GO:0016048 "detection of
            temperature stimulus" evidence=IEA] [GO:0009593 "detection of
            chemical stimulus" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
            GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 OMA:KGSPLCS EMBL:CT990615
            Ensembl:ENSSSCT00000011374 Uniprot:F1SDX7
        Length = 263

 Score = 166 (63.5 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTFT  QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78


>MGI|MGI:2148204 [details] [associations]
            symbol:Prrxl1 "paired related homeobox protein-like 1"
            species:10090 "Mus musculus" [GO:0001764 "neuron migration"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0007409
            "axonogenesis" evidence=IMP] [GO:0007411 "axon guidance"
            evidence=IMP] [GO:0009593 "detection of chemical stimulus"
            evidence=IMP] [GO:0016048 "detection of temperature stimulus"
            evidence=IMP] [GO:0021516 "dorsal spinal cord development"
            evidence=IMP] [GO:0021559 "trigeminal nerve development"
            evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0050954 "sensory perception of mechanical stimulus"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:2148204 GO:GO:0005634 GO:GO:0007411
            GO:GO:0001764 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
            GO:GO:0021559 GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743
            OrthoDB:EOG49CQ88 EMBL:EU670677 EMBL:EU670678 EMBL:AK039633
            EMBL:BC132613 EMBL:BC145917 EMBL:AY116506 IPI:IPI00280476
            IPI:IPI00896701 RefSeq:NP_001001796.1 UniGene:Mm.119274 HSSP:Q99697
            ProteinModelPortal:Q8BYH0 SMR:Q8BYH0 STRING:Q8BYH0
            PhosphoSite:Q8BYH0 PRIDE:Q8BYH0 Ensembl:ENSMUST00000068938
            GeneID:107751 KEGG:mmu:107751 CTD:107751 HOGENOM:HOG000207632
            InParanoid:B2ZIF4 OMA:PPARNIN NextBio:359376 Bgee:Q8BYH0
            CleanEx:MM_PRRXL1 Genevestigator:Q8BYH0 GO:GO:0009593 GO:GO:0016048
            GO:GO:0050954 Uniprot:Q8BYH0
        Length = 263

 Score = 166 (63.5 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTFT  QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78


>UNIPROTKB|E2QSM2 [details] [associations]
            symbol:DRGX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954
            "sensory perception of mechanical stimulus" evidence=IEA]
            [GO:0021559 "trigeminal nerve development" evidence=IEA]
            [GO:0021516 "dorsal spinal cord development" evidence=IEA]
            [GO:0016048 "detection of temperature stimulus" evidence=IEA]
            [GO:0009593 "detection of chemical stimulus" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0001764 "neuron
            migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
            GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
            GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 OMA:KGSPLCS
            EMBL:AAEX03015368 EMBL:AAEX03015367 Ensembl:ENSCAFT00000010667
            Uniprot:E2QSM2
        Length = 264

 Score = 166 (63.5 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTFT  QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    30 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 79


>RGD|620371 [details] [associations]
            symbol:Rax "retina and anterior neural fold homeobox"
            species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=ISO] [GO:0007420 "brain development"
            evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
            [GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
            development" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
            GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
            KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
            IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
            ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
            GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
            NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
            GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
        Length = 342

 Score = 170 (64.9 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    87 ESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             E EP    K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   129 EEEPP---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 182


>UNIPROTKB|Q9JLT7 [details] [associations]
            symbol:Rax "Retinal homeobox protein Rx" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
            GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
            KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
            IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
            ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
            GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
            NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
            GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
        Length = 342

 Score = 170 (64.9 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    87 ESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             E EP    K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   129 EEEPP---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 182


>UNIPROTKB|C9JW76 [details] [associations]
            symbol:DRGX "Dorsal root ganglia homeobox protein"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0001764 "neuron
            migration" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
            [GO:0009593 "detection of chemical stimulus" evidence=IEA]
            [GO:0016048 "detection of temperature stimulus" evidence=IEA]
            [GO:0021516 "dorsal spinal cord development" evidence=IEA]
            [GO:0021559 "trigeminal nerve development" evidence=IEA]
            [GO:0050954 "sensory perception of mechanical stimulus"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GO:GO:0021559 GO:GO:0021516 EMBL:AC027674
            UniGene:Hs.534530 HGNC:HGNC:21536 GO:GO:0009593 GO:GO:0016048
            GO:GO:0050954 IPI:IPI00943047 RefSeq:NP_001073989.1
            ProteinModelPortal:C9JW76 SMR:C9JW76 STRING:C9JW76
            Ensembl:ENST00000434016 GeneID:644168 KEGG:hsa:644168
            UCSC:uc010qgq.2 CTD:644168 PharmGKB:PA162384078 OMA:KGSPLCS
            GenomeRNAi:644168 NextBio:115949 ArrayExpress:C9JW76 Bgee:C9JW76
            Uniprot:C9JW76
        Length = 268

 Score = 166 (63.5 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTFT  QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83


>UNIPROTKB|C0KTF9 [details] [associations]
            symbol:PAX5 "B cell specific activator protein variant A
            delta 3/8" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00292 PRINTS:PR00027
            PROSITE:PS00034 PROSITE:PS51057 SMART:SM00351 GO:GO:0007275
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 SUPFAM:SSF46689
            HOGENOM:HOG000230938 InterPro:IPR022130 Pfam:PF12403 EMBL:AL161781
            EMBL:AL450267 UniGene:Hs.654464 HGNC:HGNC:8619 ChiTaRS:PAX5
            EMBL:FJ626424 IPI:IPI00941332 SMR:C0KTF9 STRING:C0KTF9
            Ensembl:ENST00000446742 UCSC:uc011lpx.1 Uniprot:C0KTF9
        Length = 291

 Score = 167 (63.8 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 54/143 (37%), Positives = 71/143 (49%)

Query:     1 MAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRP----------GVIG-GSKPRVAT 49
             +A  GVRPC ISRQLRVSHGCVSKIL R   T   +P           ++  GS  +V++
Sbjct:    44 LAHQGVRPCDISRQLRVSHGCVSKILGRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSS 103

Query:    50 PDVEKRIEEYKKTNP-NITSWEV-RDKLIKVSRLDDSDT---ESEPGIVLKRKQRRSRTT 104
                +     Y  +    ITS     +K  +   + +S      S PG    RKQ R    
Sbjct:   104 VSTDSAGSSYSISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRG-DL 162

Query:   105 FTSAQLEELEKSFQRSHYPDIYT 127
             FT  QLE L++ F+R HY DI+T
Sbjct:   163 FTQQQLEVLDRVFERQHYSDIFT 185


>UNIPROTKB|F1P7I2 [details] [associations]
            symbol:ALX3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
            OMA:PYSHPHG EMBL:AAEX03004725 EMBL:AAEX03004724
            Ensembl:ENSCAFT00000031481 Uniprot:F1P7I2
        Length = 254

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 31/49 (63%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K K+RR+RTTF++ QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:    61 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 109


>UNIPROTKB|F1S615 [details] [associations]
            symbol:LOC100621405 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
            OMA:PYSHPHG EMBL:CU137690 Ensembl:ENSSSCT00000007462 Uniprot:F1S615
        Length = 254

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 31/49 (63%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K K+RR+RTTF++ QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:    61 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 109


>ZFIN|ZDB-GENE-051030-21 [details] [associations]
            symbol:shox "short stature homeobox" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
            Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
            Uniprot:F1Q5T6
        Length = 304

 Score = 167 (63.8 bits), Expect = 3.4e-12, P = 3.4e-12
 Identities = 38/94 (40%), Positives = 58/94 (61%)

Query:    51 DVEK-RIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQ 109
             ++EK +++E+  T  +   ++ +DK   V + +D D +S      K KQRRSRT FT  Q
Sbjct:    68 ELEKEKLKEFSVTRASDGIYDCKDKKEDV-KSEDEDAQS------KLKQRRSRTNFTLEQ 120

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L ELE+ F  +HYPD + RE L+ + G++E RVQ
Sbjct:   121 LNELERLFDETHYPDAFMREELSQRLGLSEARVQ 154


>FB|FBgn0023489 [details] [associations]
            symbol:Pph13 "PvuII-PstI homology 13" species:7227
            "Drosophila melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IDA] [GO:0042052 "rhabdomere
            development" evidence=IMP] [GO:0042463 "ocellus photoreceptor cell
            development" evidence=IGI] [GO:0042051 "compound eye photoreceptor
            development" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0042803 "protein
            homodimerization activity" evidence=IDA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0042803
            GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001077
            GO:GO:0042052 HSSP:P06601 GO:GO:0042463 EMBL:AY069033
            ProteinModelPortal:Q8T0V5 SMR:Q8T0V5 STRING:Q8T0V5 PRIDE:Q8T0V5
            FlyBase:FBgn0023489 eggNOG:NOG321435 InParanoid:Q8T0V5
            OrthoDB:EOG45TB3W ArrayExpress:Q8T0V5 Bgee:Q8T0V5 Uniprot:Q8T0V5
        Length = 357

 Score = 169 (64.5 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 31/50 (62%), Positives = 41/50 (82%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             +KRKQRR RTTF + QL+ELE++FQR+HYPD++ RE LA +  +TE RVQ
Sbjct:     6 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ 55


>FB|FBgn0000625 [details] [associations]
            symbol:eyg "eyegone" species:7227 "Drosophila melanogaster"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS;NAS] [GO:0005667 "transcription factor
            complex" evidence=ISS] [GO:0007435 "salivary gland morphogenesis"
            evidence=TAS] [GO:0001654 "eye development" evidence=IMP]
            [GO:0001745 "compound eye morphogenesis" evidence=IMP] [GO:0000977
            "RNA polymerase II regulatory region sequence-specific DNA binding"
            evidence=IDA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0007477 "notum development"
            evidence=IMP] [GO:0007469 "antennal development" evidence=IMP]
            [GO:0048749 "compound eye development" evidence=IMP] [GO:0035214
            "eye-antennal disc development" evidence=IMP] InterPro:IPR001356
            InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF00292 PROSITE:PS00027 PROSITE:PS50071
            PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
            GO:GO:0007435 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0000977 GO:GO:0001745 GO:GO:0007469 GO:GO:0007477
            FlyBase:FBgn0000625 EMBL:BT021470 ProteinModelPortal:Q5BHV4
            STRING:Q5BHV4 PRIDE:Q5BHV4 InParanoid:Q5BHV4 ArrayExpress:Q5BHV4
            Bgee:Q5BHV4 Uniprot:Q5BHV4
        Length = 675

 Score = 174 (66.3 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 43/105 (40%), Positives = 62/105 (59%)

Query:     5 GVRPCVISRQLRVSHGCVSKILNRYQETGSIRP-GVIGGSKPRVATPDVEKRIEEYKKTN 63
             G+R   I++ +    G VSK+L      GS+RP G+IGGSKP+VATP V  +IE+YK+ N
Sbjct:   135 GLRGYDIAQHMLTQQGAVSKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKREN 188

Query:    64 PNITSWEVRDKLIKVSRLDDSDTESEPGI--VLK-RKQRRSRTTF 105
             P I +WE+R++LI      ++   S   I  +L+ R   R  T F
Sbjct:   189 PTIFAWEIRERLISEGVCTNATAPSVSSINRILRNRAAERVATEF 233

 Score = 142 (55.0 bits), Expect = 9.6e-09, P = 9.6e-09
 Identities = 33/63 (52%), Positives = 42/63 (66%)

Query:    81 LDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTET 140
             LDD D   EP      K RR+RTTF+  QLEELEK F +SHYP + TRE L+++  ++E 
Sbjct:   345 LDDDD---EP------KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEA 395

Query:   141 RVQ 143
             RVQ
Sbjct:   396 RVQ 398


>UNIPROTKB|F1NYD6 [details] [associations]
            symbol:VSX1 "Visual system homeobox 1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007601 "visual perception" evidence=IEA] [GO:0042551 "neuron
            maturation" evidence=IEA] [GO:0060040 "retinal bipolar neuron
            differentiation" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104013 InterPro:IPR023339 PROSITE:PS51496
            IPI:IPI00577521 EMBL:AADN02041203 Ensembl:ENSGALT00000013957
            OMA:MEVSRKA Uniprot:F1NYD6
        Length = 215

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 32/61 (52%), Positives = 41/61 (67%)

Query:    83 DSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRV 142
             D+     P   +KRK+RR RT FT+ QLEELEK+F  +HYPD+Y RE LA K  + E R+
Sbjct:     7 DASELKMPASQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLAVKTELPEDRI 66

Query:   143 Q 143
             Q
Sbjct:    67 Q 67


>UNIPROTKB|G1K2Z3 [details] [associations]
            symbol:PRRX1 "Paired mesoderm homeobox protein 1"
            species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
            regulation of mesenchymal cell proliferation" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
            evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=IEA] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
            OMA:WGSAAPY EMBL:AADN02033985 EMBL:AADN02033987 EMBL:AADN02033986
            Ensembl:ENSGALT00000005264 Uniprot:G1K2Z3
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|G1K361 [details] [associations]
            symbol:PRRX1 "Paired mesoderm homeobox protein 1"
            species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
            regulation of mesenchymal cell proliferation" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
            evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=IEA] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AADN02033985
            EMBL:AADN02033987 EMBL:AADN02033986 ProteinModelPortal:G1K361
            Ensembl:ENSGALT00000033836 Uniprot:G1K361
        Length = 214

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|Q05437 [details] [associations]
            symbol:PRRX1 "Paired mesoderm homeobox protein 1"
            species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG267226
            EMBL:D13433 EMBL:S69088 IPI:IPI00592701 PIR:I51226
            RefSeq:NP_001007822.1 UniGene:Gga.1546 ProteinModelPortal:Q05437
            SMR:Q05437 IntAct:Q05437 STRING:Q05437 GeneID:373941
            KEGG:gga:373941 CTD:5396 HOVERGEN:HBG021349 InParanoid:Q05437
            KO:K09329 OrthoDB:EOG4RR6J8 NextBio:20813473 Uniprot:Q05437
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|A2VE85 [details] [associations]
            symbol:PRRX1 "Paired related homeobox 1" species:9913 "Bos
            taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0048844 "artery
            morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
            skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
            regulation of smoothened signaling pathway" evidence=IEA]
            [GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
            "inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0002053 "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
            GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
            GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
            GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
            HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
            EMBL:DAAA02042867 EMBL:DAAA02042868 EMBL:BC133623 IPI:IPI00717328
            RefSeq:NP_001075208.1 UniGene:Bt.78963 SMR:A2VE85
            Ensembl:ENSBTAT00000006003 GeneID:540901 KEGG:bta:540901
            InParanoid:A2VE85 NextBio:20878904 Uniprot:A2VE85
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|E2RGD6 [details] [associations]
            symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071837 "HMG box domain binding"
            evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0048844
            "artery morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
            skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
            regulation of smoothened signaling pathway" evidence=IEA]
            [GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
            "inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0002053 "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
            GO:GO:0030326 GO:GO:0051216 GO:GO:0060021 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
            GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
            GO:GO:0042474 CTD:5396 KO:K09329 OMA:WGSAAPY EMBL:AAEX03005214
            EMBL:AAEX03005215 RefSeq:XP_850725.1 ProteinModelPortal:E2RGD6
            SMR:E2RGD6 Ensembl:ENSCAFT00000023797 GeneID:609105 KEGG:cfa:609105
            NextBio:20894722 Uniprot:E2RGD6
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|J9P9S0 [details] [associations]
            symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
            CTD:5396 KO:K09329 EMBL:AAEX03005214 EMBL:AAEX03005215
            GeneID:609105 KEGG:cfa:609105 RefSeq:XP_862211.1
            ProteinModelPortal:J9P9S0 Ensembl:ENSCAFT00000049641 Uniprot:J9P9S0
        Length = 217

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|G3V2N3 [details] [associations]
            symbol:PRRX1 "Paired mesoderm homeobox protein 1"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 EMBL:Z97200 HGNC:HGNC:9142 ChiTaRS:PRRX1
            ProteinModelPortal:G3V2N3 SMR:G3V2N3 Ensembl:ENST00000497230
            ArrayExpress:G3V2N3 Bgee:G3V2N3 Uniprot:G3V2N3
        Length = 200

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|G3V4R6 [details] [associations]
            symbol:PRRX1 "Paired mesoderm homeobox protein 1"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
            proliferation" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
            evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=IEA] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0042472 GO:GO:0030326
            GO:GO:0051216 GO:GO:0060021 GO:GO:0048844 GO:GO:0048701
            GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 EMBL:Z97200
            HGNC:HGNC:9142 ChiTaRS:PRRX1 ProteinModelPortal:G3V4R6 SMR:G3V4R6
            Ensembl:ENST00000553786 ArrayExpress:G3V4R6 Bgee:G3V4R6
            Uniprot:G3V4R6
        Length = 93

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    44 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 92


>UNIPROTKB|P54821 [details] [associations]
            symbol:PRRX1 "Paired mesoderm homeobox protein 1"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
            proliferation" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
            evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=IEA] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0003713 "transcription
            coactivator activity" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0003713 GO:GO:0042472
            GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
            GO:GO:0048701 GO:GO:0002053 GO:GO:0045880 GO:GO:0042474
            eggNOG:NOG267226 CTD:5396 HOVERGEN:HBG021349 KO:K09329
            OrthoDB:EOG4RR6J8 EMBL:AB451463 EMBL:Z97200 EMBL:BC074993
            EMBL:M95929 IPI:IPI00008822 IPI:IPI00221036 RefSeq:NP_008833.1
            RefSeq:NP_073207.1 UniGene:Hs.283416 ProteinModelPortal:P54821
            SMR:P54821 STRING:P54821 PhosphoSite:P54821 DMDM:6174916
            PRIDE:P54821 DNASU:5396 Ensembl:ENST00000239461
            Ensembl:ENST00000367760 GeneID:5396 KEGG:hsa:5396 UCSC:uc001ghe.3
            UCSC:uc001ghf.3 GeneCards:GC01P170632 HGNC:HGNC:9142 HPA:HPA051084
            MIM:167420 MIM:202650 neXtProt:NX_P54821 Orphanet:990
            PharmGKB:PA33466 InParanoid:P54821 OMA:WGSAAPY PhylomeDB:P54821
            ChiTaRS:PRRX1 GenomeRNAi:5396 NextBio:20925 ArrayExpress:P54821
            Bgee:P54821 CleanEx:HS_PRRX1 Genevestigator:P54821
            GermOnline:ENSG00000116132 Uniprot:P54821
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|F1RSD4 [details] [associations]
            symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
            EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
        Length = 141

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    13 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 61


>MGI|MGI:97712 [details] [associations]
            symbol:Prrx1 "paired related homeobox 1" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO] [GO:0002053 "positive
            regulation of mesenchymal cell proliferation" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0030326 "embryonic limb morphogenesis" evidence=IGI]
            [GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0042474
            "middle ear morphogenesis" evidence=IGI;IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045880 "positive
            regulation of smoothened signaling pathway" evidence=IGI]
            [GO:0048701 "embryonic cranial skeleton morphogenesis"
            evidence=IGI;IMP] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IGI;IMP] [GO:0048844 "artery morphogenesis"
            evidence=IGI;IMP] [GO:0051216 "cartilage development"
            evidence=IGI;IMP] [GO:0060021 "palate development" evidence=IMP]
            [GO:0071837 "HMG box domain binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:97712 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0042472 GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518
            GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
            GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
            HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
            ChiTaRS:PRRX1 EMBL:L06502 EMBL:U03873 EMBL:X59725 EMBL:BC092372
            IPI:IPI00118248 IPI:IPI00230653 PIR:I48902 PIR:S26076
            RefSeq:NP_035257.1 RefSeq:NP_783617.2 UniGene:Mm.288642
            ProteinModelPortal:P63013 SMR:P63013 IntAct:P63013 STRING:P63013
            PhosphoSite:P63013 PRIDE:P63013 Ensembl:ENSMUST00000027878
            Ensembl:ENSMUST00000075805 GeneID:18933 KEGG:mmu:18933
            UCSC:uc007dhh.1 UCSC:uc007dhi.1 InParanoid:P63013 NextBio:295248
            Bgee:P63013 CleanEx:MM_PRRX1 Genevestigator:P63013
            GermOnline:ENSMUSG00000026586 Uniprot:P63013
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>RGD|628884 [details] [associations]
            symbol:Prrx1 "paired related homeobox 1" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IDA] [GO:0002053 "positive
            regulation of mesenchymal cell proliferation" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=IEA;ISO] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA;ISO] [GO:0042472 "inner ear
            morphogenesis" evidence=IEA;ISO] [GO:0042474 "middle ear
            morphogenesis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045880 "positive regulation of
            smoothened signaling pathway" evidence=IEA;ISO] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IEA;ISO]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
            [GO:0048844 "artery morphogenesis" evidence=IEA;ISO] [GO:0051216
            "cartilage development" evidence=IEA;ISO] [GO:0060021 "palate
            development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
            evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0042472
            GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
            GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
            GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
            HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
            EMBL:S82911 IPI:IPI00198569 RefSeq:NP_722543.1 UniGene:Rn.203584
            ProteinModelPortal:P63014 SMR:P63014 STRING:P63014
            Ensembl:ENSRNOT00000004950 GeneID:266813 KEGG:rno:266813
            UCSC:RGD:628884 InParanoid:P63014 NextBio:624741
            ArrayExpress:P63014 Genevestigator:P63014
            GermOnline:ENSRNOG00000003720 Uniprot:P63014
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>UNIPROTKB|Q643W9 [details] [associations]
            symbol:Prrx1 "Paired mesoderm homeobox protein 1"
            species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
            EMBL:CH473958 HOVERGEN:HBG021349 UniGene:Rn.203584 EMBL:AY730764
            IPI:IPI00471690 SMR:Q643W9 STRING:Q643W9 Ensembl:ENSRNOT00000042557
            Genevestigator:Q643W9 Uniprot:Q643W9
        Length = 217

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 139


>ZFIN|ZDB-GENE-020905-5 [details] [associations]
            symbol:prrx1a "paired related homeobox 1a"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-020905-5 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P06601
            HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 eggNOG:NOG309174 EMBL:BX548024
            EMBL:BC053228 IPI:IPI00493267 RefSeq:NP_999899.1 UniGene:Dr.32622
            SMR:Q7T373 Ensembl:ENSDART00000041365 GeneID:406431 KEGG:dre:406431
            CTD:406431 InParanoid:Q7T373 OMA:CANNTTA NextBio:20818028
            Uniprot:Q7T373
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    93 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 141


>ZFIN|ZDB-GENE-030131-9033 [details] [associations]
            symbol:prrx1b "paired related homeobox 1b"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0010628 "positive regulation of gene expression"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-030131-9033 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0010628 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P10037
            eggNOG:NOG267226 HOVERGEN:HBG021349 KO:K09329 OMA:WGSAAPY
            EMBL:CU571309 EMBL:BC064671 IPI:IPI00499847 RefSeq:NP_956344.1
            UniGene:Dr.76340 SMR:Q6P295 Ensembl:ENSDART00000061588
            GeneID:337089 KEGG:dre:337089 CTD:337089 InParanoid:Q6P295
            NextBio:20812053 Uniprot:Q6P295
        Length = 245

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             KRKQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  +TE RVQ
Sbjct:    93 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 141


>FB|FBgn0020617 [details] [associations]
            symbol:Rx "Retinal Homeobox" species:7227 "Drosophila
            melanogaster" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0007420
            "brain development" evidence=NAS] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG261733
            GeneTree:ENSGT00700000104256 EMBL:AJ223300 EMBL:AY118390
            RefSeq:NP_726006.2 UniGene:Dm.3064 ProteinModelPortal:Q9W2Q1
            SMR:Q9W2Q1 STRING:Q9W2Q1 EnsemblMetazoa:FBtr0071518 GeneID:37367
            KEGG:dme:Dmel_CG10052 CTD:37367 FlyBase:FBgn0020617
            InParanoid:Q9W2Q1 OMA:MVEANQL OrthoDB:EOG43BK55 PhylomeDB:Q9W2Q1
            GenomeRNAi:37367 NextBio:803298 Bgee:Q9W2Q1 GermOnline:CG10052
            Uniprot:Q9W2Q1
        Length = 873

 Score = 175 (66.7 bits), Expect = 4.0e-12, P = 4.0e-12
 Identities = 33/60 (55%), Positives = 44/60 (73%)

Query:    84 SDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             SD E +     K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   514 SDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 573


>UNIPROTKB|Q9Y2V3 [details] [associations]
            symbol:RAX "Retinal homeobox protein Rx" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007389 "pattern specification process"
            evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
            [GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
            "limb development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007601 "visual perception" evidence=TAS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
            HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
            GO:GO:0021854 Orphanet:2542 EMBL:AC067859 CleanEx:HS_RAX
            HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062 KO:K09332
            EMBL:AF115392 IPI:IPI00021025 RefSeq:NP_038463.2 UniGene:Hs.278957
            ProteinModelPortal:Q9Y2V3 SMR:Q9Y2V3 STRING:Q9Y2V3
            PhosphoSite:Q9Y2V3 DMDM:296452886 PaxDb:Q9Y2V3 PRIDE:Q9Y2V3
            DNASU:30062 Ensembl:ENST00000334889 GeneID:30062 KEGG:hsa:30062
            UCSC:uc002lhx.3 GeneCards:GC18M056909 H-InvDB:HIX0202674
            HGNC:HGNC:18662 MIM:601881 MIM:611038 neXtProt:NX_Q9Y2V3
            PharmGKB:PA38626 InParanoid:Q9Y2V3 OMA:CGPGFGD PhylomeDB:Q9Y2V3
            ChiTaRS:RAX GenomeRNAi:30062 NextBio:52852 ArrayExpress:Q9Y2V3
            Bgee:Q9Y2V3 Genevestigator:Q9Y2V3 GermOnline:ENSG00000134438
            Uniprot:Q9Y2V3
        Length = 346

 Score = 168 (64.2 bits), Expect = 4.1e-12, P = 4.1e-12
 Identities = 30/49 (61%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181


>UNIPROTKB|E1BHB8 [details] [associations]
            symbol:LOC615339 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0021854 "hypothalamus development"
            evidence=IEA] [GO:0007389 "pattern specification process"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
            GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
            OMA:CGPGFGD EMBL:DAAA02057180 IPI:IPI00710082
            Ensembl:ENSBTAT00000030986 Uniprot:E1BHB8
        Length = 351

 Score = 168 (64.2 bits), Expect = 4.3e-12, P = 4.3e-12
 Identities = 30/49 (61%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 182


>ZFIN|ZDB-GENE-990415-238 [details] [associations]
            symbol:rx3 "retinal homeobox gene 3" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0048596
            "embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0030900
            "forebrain development" evidence=IMP] [GO:0001654 "eye development"
            evidence=IMP] [GO:0001755 "neural crest cell migration"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IMP] [GO:0060041 "retina development in camera-type eye"
            evidence=IMP] [GO:0048593 "camera-type eye morphogenesis"
            evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-238 GO:GO:0005634 GO:GO:0001708 GO:GO:0001755
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 HOGENOM:HOG000231518 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GO:GO:0021984 eggNOG:NOG261733
            GO:GO:0048596 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 KO:K09332
            EMBL:AF001909 IPI:IPI00493738 RefSeq:NP_571302.1 UniGene:Dr.540
            ProteinModelPortal:O42358 SMR:O42358 STRING:O42358 GeneID:30474
            KEGG:dre:30474 CTD:30474 InParanoid:O42358 NextBio:20806867
            ArrayExpress:O42358 Uniprot:O42358
        Length = 292

 Score = 165 (63.1 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 30/49 (61%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   103 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 151


>UNIPROTKB|F1NFE6 [details] [associations]
            symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
            differentiation" evidence=IEA] [GO:0002053 "positive regulation of
            mesenchymal cell proliferation" evidence=IEA] [GO:0002063
            "chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
            development" evidence=IEA] [GO:0003209 "cardiac atrium
            morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
            differentiation" evidence=IEA] [GO:0045880 "positive regulation of
            smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
            evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
            fiber development" evidence=IEA] [GO:0050772 "positive regulation
            of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
            joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
            development involved in endochondral bone morphogenesis"
            evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
            evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
            a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
            GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
            EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
            Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
        Length = 221

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/63 (52%), Positives = 42/63 (66%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             +D  +E E G   K KQRRSRT FT  QL ELE+ F  +HYPD + RE L+ + G++E R
Sbjct:    36 EDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 94

Query:   142 VQQ 144
             VQQ
Sbjct:    95 VQQ 97


>UNIPROTKB|Q9PVX0 [details] [associations]
            symbol:RX2 "Retinal homeobox protein Rx2" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG021349
            EMBL:AB020318 IPI:IPI00590568 UniGene:Gga.27
            ProteinModelPortal:Q9PVX0 SMR:Q9PVX0 Uniprot:Q9PVX0
        Length = 317

 Score = 166 (63.5 bits), Expect = 5.2e-12, P = 5.2e-12
 Identities = 30/49 (61%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K+K RR+RTTFT+ QL ELE++F++SHYPD+Y+RE LA K  + E RVQ
Sbjct:   119 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 167


>UNIPROTKB|F1NC94 [details] [associations]
            symbol:ALX1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001843 "neural tube
            closure" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0014031 "mesenchymal cell development" evidence=IEA]
            [GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0000122 OMA:QLAMRTE InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GeneTree:ENSGT00700000104013 EMBL:AADN02009698
            EMBL:AADN02009699 IPI:IPI00586585 Ensembl:ENSGALT00000018176
            Uniprot:F1NC94
        Length = 318

 Score = 166 (63.5 bits), Expect = 5.2e-12, P = 5.2e-12
 Identities = 33/51 (64%), Positives = 39/51 (76%)

Query:    93 VLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             V   K+RR RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   119 VSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 169


>UNIPROTKB|E1BKK2 [details] [associations]
            symbol:ALX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060021 "palate development" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
            evidence=IEA] [GO:0014031 "mesenchymal cell development"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001843 "neural
            tube closure" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
            GO:GO:0030326 GO:GO:0001843 CTD:8092 KO:K09334 OMA:QLAMRTE
            GO:GO:0048704 GO:GO:0014031 GO:GO:0060021 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
            EMBL:DAAA02012574 IPI:IPI00704637 RefSeq:NP_001179220.1
            UniGene:Bt.87394 Ensembl:ENSBTAT00000019938 GeneID:539689
            KEGG:bta:539689 NextBio:20878156 Uniprot:E1BKK2
        Length = 326

 Score = 166 (63.5 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 33/51 (64%), Positives = 39/51 (76%)

Query:    93 VLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             V   K+RR RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   127 VSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177


>UNIPROTKB|Q15699 [details] [associations]
            symbol:ALX1 "ALX homeobox protein 1" species:9606 "Homo
            sapiens" [GO:0001843 "neural tube closure" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0014031 "mesenchymal cell
            development" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0003714 "transcription corepressor activity"
            evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0007420 "brain development"
            evidence=TAS] [GO:0001502 "cartilage condensation" evidence=TAS]
            [GO:0007275 "multicellular organismal development" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003714
            GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0005667 GO:GO:0000122 GO:GO:0006366 GO:GO:0030326
            GO:GO:0001843 EMBL:U31986 EMBL:AJ558236 EMBL:AJ558237 EMBL:BC010923
            IPI:IPI00018956 RefSeq:NP_008913.2 UniGene:Hs.41683
            ProteinModelPortal:Q15699 SMR:Q15699 IntAct:Q15699
            MINT:MINT-1465062 STRING:Q15699 PhosphoSite:Q15699 DMDM:90111820
            PaxDb:Q15699 PRIDE:Q15699 DNASU:8092 Ensembl:ENST00000316824
            GeneID:8092 KEGG:hsa:8092 UCSC:uc001tae.4 CTD:8092
            GeneCards:GC12P085674 H-InvDB:HIX0018568 HGNC:HGNC:1494
            HPA:HPA001598 HPA:HPA018905 MIM:601527 MIM:613456
            neXtProt:NX_Q15699 PharmGKB:PA162376294 eggNOG:NOG304827
            HOGENOM:HOG000231518 HOVERGEN:HBG050798 InParanoid:Q15699 KO:K09334
            OMA:QLAMRTE OrthoDB:EOG4G4GR5 PhylomeDB:Q15699 GenomeRNAi:8092
            NextBio:30733 Bgee:Q15699 CleanEx:HS_ALX1 Genevestigator:Q15699
            GermOnline:ENSG00000180318 GO:GO:0001502 GO:GO:0048704
            GO:GO:0014031 GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 Uniprot:Q15699
        Length = 326

 Score = 166 (63.5 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 33/51 (64%), Positives = 39/51 (76%)

Query:    93 VLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             V   K+RR RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   127 VSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177


>UNIPROTKB|F1SPX2 [details] [associations]
            symbol:ALX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060021 "palate development" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
            evidence=IEA] [GO:0014031 "mesenchymal cell development"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001843 "neural
            tube closure" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
            GO:GO:0030326 GO:GO:0001843 CTD:8092 KO:K09334 OMA:QLAMRTE
            GO:GO:0048704 GO:GO:0014031 GO:GO:0060021 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
            EMBL:FP102711 RefSeq:XP_003126788.1 Ensembl:ENSSSCT00000001019
            GeneID:100525700 KEGG:ssc:100525700 Uniprot:F1SPX2
        Length = 326

 Score = 166 (63.5 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 33/51 (64%), Positives = 39/51 (76%)

Query:    93 VLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             V   K+RR RTTFTS QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   127 VSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177


>UNIPROTKB|Q9GMA3 [details] [associations]
            symbol:VSX1 "Visual system homeobox 1" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
            bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
            maturation" evidence=IEA] [GO:0007601 "visual perception"
            evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 GO:GO:0060040
            GO:GO:0042551 eggNOG:NOG237888 HOGENOM:HOG000115909
            InterPro:IPR023339 PROSITE:PS51496 EMBL:AF251032 IPI:IPI00716722
            RefSeq:NP_777192.1 UniGene:Bt.5555 ProteinModelPortal:Q9GMA3
            SMR:Q9GMA3 PRIDE:Q9GMA3 Ensembl:ENSBTAT00000004329 GeneID:286802
            KEGG:bta:286802 CTD:30813 HOVERGEN:HBG036251 InParanoid:Q9GMA3
            KO:K09335 OMA:WGSDHLK OrthoDB:EOG4907B0 NextBio:20806456
            Uniprot:Q9GMA3
        Length = 365

 Score = 167 (63.8 bits), Expect = 6.1e-12, P = 6.1e-12
 Identities = 34/62 (54%), Positives = 43/62 (69%)

Query:    82 DDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             D SD ++ P    KRK+RR RT FT+ QLEELEK+F  +HYPD+Y RE LA K  + E R
Sbjct:   149 DRSDRKASPA-PSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMKTELPEDR 207

Query:   142 VQ 143
             +Q
Sbjct:   208 IQ 209


>FB|FBgn0085369 [details] [associations]
            symbol:CG34340 species:7227 "Drosophila melanogaster"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IMP]
            [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 EMBL:AE014134 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048813 GO:GO:0007517
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            RefSeq:NP_001097075.2 UniGene:Dm.12203 ProteinModelPortal:A8DYQ2
            SMR:A8DYQ2 GeneID:5740176 KEGG:dme:Dmel_CG34340 FlyBase:FBgn0085369
            InParanoid:A8DYQ2 OrthoDB:EOG4NGF3W PhylomeDB:A8DYQ2
            GenomeRNAi:5740176 NextBio:20891216 Bgee:A8DYQ2 Uniprot:A8DYQ2
        Length = 607

 Score = 171 (65.3 bits), Expect = 6.3e-12, P = 6.3e-12
 Identities = 32/50 (64%), Positives = 41/50 (82%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             ++RKQRR+RTTFT  QLEELE +F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    68 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQ 117


>ZFIN|ZDB-GENE-090313-51 [details] [associations]
            symbol:phox2ba "paired-like homeobox 2ba"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-090313-51 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104256 eggNOG:NOG301263 EMBL:BX323984
            IPI:IPI00923759 RefSeq:NP_001139175.1 UniGene:Dr.161702
            Ensembl:ENSDART00000110517 Ensembl:ENSDART00000141795 GeneID:795258
            CTD:795258 HOVERGEN:HBG106787 OMA:SWNESSS NextBio:20932169
            Uniprot:B8A4X8
        Length = 155

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 32/55 (58%), Positives = 40/55 (72%)

Query:    89 EPGIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             E G+  +RKQRR RT FTSAQL+ LE++F  + YPDIYTRE L  +  +TE RVQ
Sbjct:     4 ERGVQERRKQRRVRTIFTSAQLKALERAFAHTQYPDIYTREELVQEIQLTEARVQ 58


>UNIPROTKB|J9P3P5 [details] [associations]
            symbol:OTP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GeneTree:ENSGT00700000104013 OMA:RWATAGM EMBL:AAEX03002130
            Ensembl:ENSCAFT00000046395 Uniprot:J9P3P5
        Length = 327

 Score = 165 (63.1 bits), Expect = 7.5e-12, P = 7.5e-12
 Identities = 31/51 (60%), Positives = 41/51 (80%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQQF 145
             ++KQ+R RT FT AQL ELE+SF ++HYPDI+ RE LA + G+TE+RVQ F
Sbjct:   101 QQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVF 151


>MGI|MGI:98218 [details] [associations]
            symbol:Prrx2 "paired related homeobox 2" species:10090 "Mus
            musculus" [GO:0002053 "positive regulation of mesenchymal cell
            proliferation" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IGI] [GO:0042472 "inner ear morphogenesis"
            evidence=IGI] [GO:0042474 "middle ear morphogenesis" evidence=IGI]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=IGI] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IGI] [GO:0048844 "artery morphogenesis"
            evidence=IGI] [GO:0051216 "cartilage development" evidence=IGI]
            [GO:0071837 "HMG box domain binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:98218 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
            GO:GO:0051216 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701 GO:GO:0002053
            GO:GO:0045880 GO:GO:0042474 HOVERGEN:HBG021349 KO:K09329
            eggNOG:NOG309174 CTD:51450 EMBL:X52875 EMBL:X14572 IPI:IPI00319581
            PIR:I48410 RefSeq:NP_033142.2 UniGene:Mm.1802
            ProteinModelPortal:Q06348 SMR:Q06348 MINT:MINT-1782155
            STRING:Q06348 PhosphoSite:Q06348 PRIDE:Q06348 GeneID:20204
            KEGG:mmu:20204 InParanoid:Q06348 NextBio:297791 CleanEx:MM_PRRX2
            Genevestigator:Q06348 GermOnline:ENSMUSG00000039476 Uniprot:Q06348
        Length = 247

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 32/62 (51%), Positives = 43/62 (69%)

Query:    83 DSDTESEP-GIVLKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETR 141
             D D  S   G   K+KQRR+RTTF S+QL+ LE+ F+R+HYPD + RE LA +  ++E R
Sbjct:    82 DGDCPSPGRGTKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEAR 141

Query:   142 VQ 143
             VQ
Sbjct:   142 VQ 143


>RGD|628616 [details] [associations]
            symbol:Prrxl1 "paired related homeobox protein-like 1"
            species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
            evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=ISO] [GO:0007409
            "axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
            evidence=IEA;ISO] [GO:0009593 "detection of chemical stimulus"
            evidence=IEA;ISO] [GO:0016048 "detection of temperature stimulus"
            evidence=IEA;ISO] [GO:0021516 "dorsal spinal cord development"
            evidence=IEA;ISO] [GO:0021559 "trigeminal nerve development"
            evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0050954 "sensory perception of mechanical
            stimulus" evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 EMBL:U29174 RGD:628616 GO:GO:0005634 GO:GO:0007411
            GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0021559
            GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743 OrthoDB:EOG49CQ88
            CTD:107751 GO:GO:0009593 GO:GO:0016048 GO:GO:0050954
            IPI:IPI00208300 RefSeq:NP_665710.1 UniGene:Rn.10189
            ProteinModelPortal:Q62798 SMR:Q62798 PhosphoSite:Q62798
            GeneID:252880 KEGG:rno:252880 UCSC:RGD:628616 InParanoid:Q62798
            NextBio:623960 Genevestigator:Q62798 GermOnline:ENSRNOG00000020045
            Uniprot:Q62798
        Length = 263

 Score = 161 (61.7 bits), Expect = 8.5e-12, P = 8.5e-12
 Identities = 31/50 (62%), Positives = 38/50 (76%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTF   QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    29 LRRKQRRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78


>UNIPROTKB|Q62798 [details] [associations]
            symbol:Drgx "Dorsal root ganglia homeobox protein"
            species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 EMBL:U29174 RGD:628616 GO:GO:0005634 GO:GO:0007411
            GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0021559
            GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743 OrthoDB:EOG49CQ88
            CTD:107751 GO:GO:0009593 GO:GO:0016048 GO:GO:0050954
            IPI:IPI00208300 RefSeq:NP_665710.1 UniGene:Rn.10189
            ProteinModelPortal:Q62798 SMR:Q62798 PhosphoSite:Q62798
            GeneID:252880 KEGG:rno:252880 UCSC:RGD:628616 InParanoid:Q62798
            NextBio:623960 Genevestigator:Q62798 GermOnline:ENSRNOG00000020045
            Uniprot:Q62798
        Length = 263

 Score = 161 (61.7 bits), Expect = 8.5e-12, P = 8.5e-12
 Identities = 31/50 (62%), Positives = 38/50 (76%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTF   QLE LE  F ++HYPD++TRE LA K  +TE RVQ
Sbjct:    29 LRRKQRRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78


>MGI|MGI:1201673 [details] [associations]
            symbol:Shox2 "short stature homeobox 2" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IDA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0001649 "osteoblast differentiation"
            evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
            proliferation" evidence=IMP] [GO:0002062 "chondrocyte
            differentiation" evidence=IMP] [GO:0002063 "chondrocyte
            development" evidence=IMP] [GO:0003170 "heart valve development"
            evidence=IMP] [GO:0003209 "cardiac atrium morphogenesis"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0030326 "embryonic limb morphogenesis" evidence=IMP]
            [GO:0032330 "regulation of chondrocyte differentiation"
            evidence=IMP] [GO:0035115 "embryonic forelimb morphogenesis"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045880 "positive regulation of smoothened
            signaling pathway" evidence=IMP] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
            [GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0048743
            "positive regulation of skeletal muscle fiber development"
            evidence=IMP] [GO:0050772 "positive regulation of axonogenesis"
            evidence=IMP] [GO:0060272 "embryonic skeletal joint morphogenesis"
            evidence=IMP] [GO:0060351 "cartilage development involved in
            endochondral bone morphogenesis" evidence=IMP] [GO:0060415 "muscle
            tissue morphogenesis" evidence=IMP] [GO:2000172 "regulation of
            branching morphogenesis of a nerve" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 EMBL:U66918 MGI:MGI:1201673
            GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
            GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
            GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
            GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
            GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
            eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OMA:CTEAGRD
            OrthoDB:EOG41C6X2 EMBL:U67055 EMBL:U65071 EMBL:U65072
            IPI:IPI00230342 IPI:IPI00625691 RefSeq:NP_038693.1 UniGene:Mm.39093
            ProteinModelPortal:P70390 SMR:P70390 STRING:P70390
            PhosphoSite:P70390 PRIDE:P70390 Ensembl:ENSMUST00000029422
            Ensembl:ENSMUST00000162060 Ensembl:ENSMUST00000162439 GeneID:20429
            KEGG:mmu:20429 UCSC:uc008pld.1 UCSC:uc008ple.1 InParanoid:P70390
            NextBio:298446 Bgee:P70390 CleanEx:MM_SHOX2 Genevestigator:P70390
            GermOnline:ENSMUSG00000027833 GO:GO:0003170 Uniprot:P70390
        Length = 331

 Score = 164 (62.8 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 42/106 (39%), Positives = 57/106 (53%)

Query:    38 GVIGGSKPRVATPDVEKRIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRK 97
             G  GG +  V   D+       +  +P +T  EV  +L    R DD+    + G   K K
Sbjct:    85 GGAGGGRSPVRELDMGAAERSREPGSPRLT--EVSPEL--KDRKDDAKGMEDEGQT-KIK 139

Query:    98 QRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             QRRSRT FT  QL ELE+ F  +HYPD + RE L+ + G++E RVQ
Sbjct:   140 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 185


>UNIPROTKB|F1MC18 [details] [associations]
            symbol:ALX3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0042981
            "regulation of apoptotic process" evidence=IEA] [GO:0035116
            "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035115
            "embryonic forelimb morphogenesis" evidence=IEA] [GO:0007389
            "pattern specification process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035116
            GO:GO:0035115 GO:GO:0048704 GeneTree:ENSGT00700000104013 CTD:257
            KO:K09323 OMA:PYSHPHG GO:GO:0007389 EMBL:DAAA02007556
            IPI:IPI00714755 RefSeq:NP_001179482.1 UniGene:Bt.61185 PRIDE:F1MC18
            Ensembl:ENSBTAT00000027924 GeneID:522085 KEGG:bta:522085
            NextBio:20873443 Uniprot:F1MC18
        Length = 343

 Score = 164 (62.8 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 31/49 (63%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K K+RR+RTTF++ QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLAVRTDLTEARVQ 198


>UNIPROTKB|O95076 [details] [associations]
            symbol:ALX3 "Homeobox protein aristaless-like 3"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IEA] [GO:0035115 "embryonic
            forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
            hindlimb morphogenesis" evidence=IEA] [GO:0042981 "regulation of
            apoptotic process" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0042981 EMBL:CH471122
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518
            GO:GO:0048704 EMBL:AF008202 EMBL:AF008203 EMBL:AL160006
            EMBL:BC112007 EMBL:BC113428 IPI:IPI00028290 RefSeq:NP_006483.2
            UniGene:Hs.669953 ProteinModelPortal:O95076 SMR:O95076
            STRING:O95076 PhosphoSite:O95076 PRIDE:O95076
            Ensembl:ENST00000369792 GeneID:257 KEGG:hsa:257 UCSC:uc001dzb.3
            CTD:257 GeneCards:GC01M110602 H-InvDB:HIX0023725 H-InvDB:HIX0159682
            HGNC:HGNC:449 MIM:136760 MIM:606014 neXtProt:NX_O95076 Orphanet:250
            PharmGKB:PA24754 eggNOG:NOG292934 HOVERGEN:HBG004213
            InParanoid:O95076 KO:K09323 OMA:PYSHPHG OrthoDB:EOG40K810
            PhylomeDB:O95076 GenomeRNAi:257 NextBio:1013 Bgee:O95076
            CleanEx:HS_ALX3 Genevestigator:O95076 GermOnline:ENSG00000156150
            GO:GO:0007389 Uniprot:O95076
        Length = 343

 Score = 164 (62.8 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 31/49 (63%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K K+RR+RTTF++ QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198


>MGI|MGI:1277097 [details] [associations]
            symbol:Alx3 "aristaless-like homeobox 3" species:10090 "Mus
            musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IGI]
            [GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
            [GO:0042981 "regulation of apoptotic process" evidence=IGI]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:1277097 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704
            CTD:257 eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OMA:PYSHPHG
            OrthoDB:EOG40K810 GO:GO:0007389 EMBL:U96109 IPI:IPI00115634
            RefSeq:NP_031467.1 UniGene:Mm.10112 ProteinModelPortal:O70137
            SMR:O70137 STRING:O70137 PhosphoSite:O70137 PRIDE:O70137
            DNASU:11694 Ensembl:ENSMUST00000014747 GeneID:11694 KEGG:mmu:11694
            InParanoid:O70137 NextBio:279353 Bgee:O70137 CleanEx:MM_ALX3
            Genevestigator:O70137 GermOnline:ENSMUSG00000014603 Uniprot:O70137
        Length = 343

 Score = 164 (62.8 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 31/49 (63%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K K+RR+RTTF++ QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198


>RGD|1359270 [details] [associations]
            symbol:Alx3 "ALX homeobox 3" species:10116 "Rattus norvegicus"
            [GO:0007389 "pattern specification process" evidence=ISO]
            [GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISO]
            [GO:0042981 "regulation of apoptotic process" evidence=ISO]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AY488087 RGD:1359270 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035116
            GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704 CTD:257
            eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OrthoDB:EOG40K810
            GO:GO:0007389 IPI:IPI00421290 RefSeq:NP_001007013.1
            UniGene:Rn.18878 ProteinModelPortal:Q6RW14 SMR:Q6RW14 GeneID:365900
            KEGG:rno:365900 InParanoid:Q6RW14 NextBio:688313
            ArrayExpress:Q6RW14 Genevestigator:Q6RW14 Uniprot:Q6RW14
        Length = 343

 Score = 164 (62.8 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 31/49 (63%), Positives = 40/49 (81%)

Query:    95 KRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             K K+RR+RTTF++ QLEELEK FQ++HYPD+Y RE LA +  +TE RVQ
Sbjct:   150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198


>UNIPROTKB|F1N3B5 [details] [associations]
            symbol:VSX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060040 "retinal bipolar neuron differentiation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
            fate commitment" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
            of cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005737 GO:GO:0008285 GO:GO:0005730
            GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
            PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0045165
            GO:GO:0060040 KO:K09336 InterPro:IPR023339 PROSITE:PS51496
            CTD:338917 OMA:FSKPEYQ EMBL:DAAA02029609 IPI:IPI00716073
            RefSeq:NP_001180179.1 UniGene:Bt.106523 Ensembl:ENSBTAT00000019481
            GeneID:528647 KEGG:bta:528647 NextBio:20874875 Uniprot:F1N3B5
        Length = 361

 Score = 164 (62.8 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQR 119
             + + P  TS         VS  D   ++S      KRK+RR RT FTS QLEELEK+F  
Sbjct:   110 RASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKAFNE 169

Query:   120 SHYPDIYTREALANKFGMTETRVQ 143
             +HYPD+Y RE LA K  + E R+Q
Sbjct:   170 AHYPDVYAREMLAMKTELPEDRIQ 193


>UNIPROTKB|E2RTB3 [details] [associations]
            symbol:VSX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060040 "retinal bipolar neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045165 "cell fate commitment" evidence=IEA] [GO:0008285
            "negative regulation of cell proliferation" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0008285
            GO:GO:0005730 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
            Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
            GO:GO:0045165 GO:GO:0060040 KO:K09336 InterPro:IPR023339
            PROSITE:PS51496 CTD:338917 OMA:FSKPEYQ EMBL:AAEX03005845
            RefSeq:XP_547902.3 Ensembl:ENSCAFT00000026767 GeneID:490780
            KEGG:cfa:490780 Uniprot:E2RTB3
        Length = 361

 Score = 164 (62.8 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQR 119
             + + P  TS         VS  D   ++S      KRK+RR RT FTS QLEELEK+F  
Sbjct:   110 RASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKAFNE 169

Query:   120 SHYPDIYTREALANKFGMTETRVQ 143
             +HYPD+Y RE LA K  + E R+Q
Sbjct:   170 AHYPDVYAREMLAMKTELPEDRIQ 193


>UNIPROTKB|P58304 [details] [associations]
            symbol:VSX2 "Visual system homeobox 2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
            [GO:0050896 "response to stimulus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0045165 "cell fate
            commitment" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0060040 "retinal bipolar neuron differentiation" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0008285
            GO:GO:0005730 EMBL:CH471061 GO:GO:0008284 GO:GO:0007601
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
            GO:GO:0050896 Orphanet:98938 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0045165
            GO:GO:0060040 Orphanet:2543 Orphanet:2542 eggNOG:NOG237888
            HOGENOM:HOG000115909 KO:K09336 InterPro:IPR023339 PROSITE:PS51496
            HOVERGEN:HBG036251 CTD:338917 OMA:FSKPEYQ OrthoDB:EOG4QVCCV
            EMBL:AY336059 EMBL:AC005519 EMBL:AC006349 EMBL:BC128153
            IPI:IPI00033487 RefSeq:NP_878314.1 UniGene:Hs.449771
            ProteinModelPortal:P58304 SMR:P58304 IntAct:P58304 STRING:P58304
            PhosphoSite:P58304 DMDM:17374365 PaxDb:P58304 PRIDE:P58304
            Ensembl:ENST00000261980 GeneID:338917 KEGG:hsa:338917
            UCSC:uc001xpq.3 GeneCards:GC14P074706 HGNC:HGNC:1975 HPA:HPA003436
            MIM:142993 MIM:610092 MIM:610093 neXtProt:NX_P58304
            PharmGKB:PA26511 InParanoid:P58304 PhylomeDB:P58304
            GenomeRNAi:338917 NextBio:97195 Bgee:P58304 CleanEx:HS_VSX2
            Genevestigator:P58304 Uniprot:P58304
        Length = 361

 Score = 164 (62.8 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQR 119
             + + P  TS         VS  D   ++S      KRK+RR RT FTS QLEELEK+F  
Sbjct:   110 RASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKAFNE 169

Query:   120 SHYPDIYTREALANKFGMTETRVQ 143
             +HYPD+Y RE LA K  + E R+Q
Sbjct:   170 AHYPDVYAREMLAMKTELPEDRIQ 193


>MGI|MGI:88401 [details] [associations]
            symbol:Vsx2 "visual system homeobox 2" species:10090 "Mus
            musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IMP] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IMP] [GO:0043010 "camera-type eye
            development" evidence=IGI] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045165 "cell fate commitment"
            evidence=IMP] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0060040 "retinal
            bipolar neuron differentiation" evidence=IMP] [GO:0060042 "retina
            morphogenesis in camera-type eye" evidence=IMP] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:88401 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008285 GO:GO:0008284 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GO:GO:0045165 GO:GO:0060040 eggNOG:NOG237888 KO:K09336
            InterPro:IPR023339 PROSITE:PS51496 HOVERGEN:HBG036251 CTD:338917
            OrthoDB:EOG4QVCCV EMBL:L34808 EMBL:BC031869 IPI:IPI00990176
            PIR:I49594 RefSeq:NP_031727.1 UniGene:Mm.4405
            ProteinModelPortal:Q61412 SMR:Q61412 IntAct:Q61412 STRING:Q61412
            PhosphoSite:Q61412 PRIDE:Q61412 Ensembl:ENSMUST00000021665
            GeneID:12677 KEGG:mmu:12677 InParanoid:Q61412 ChiTaRS:Vsx2
            NextBio:281922 Bgee:Q61412 CleanEx:MM_VSX2 Genevestigator:Q61412
            GermOnline:ENSMUSG00000021239 Uniprot:Q61412
        Length = 361

 Score = 164 (62.8 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query:    60 KKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQLEELEKSFQR 119
             + + P  TS         VS  D   ++S      KRK+RR RT FTS QLEELEK+F  
Sbjct:   110 RASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKAFNE 169

Query:   120 SHYPDIYTREALANKFGMTETRVQ 143
             +HYPD+Y RE LA K  + E R+Q
Sbjct:   170 AHYPDVYAREMLAMKTELPEDRIQ 193


>UNIPROTKB|G3X7M1 [details] [associations]
            symbol:SHOX "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
            GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
            OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
            UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
            KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
        Length = 306

 Score = 162 (62.1 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 39/94 (41%), Positives = 54/94 (57%)

Query:    51 DVEK-RIEEYKKTNPNITSWEVRDKLIKVSRLDDSDTESEPGIVLKRKQRRSRTTFTSAQ 109
             D EK +++E+         ++ +DK       DD  +E E G   K KQRRSRT FT  Q
Sbjct:    78 DTEKDKLKEFGSGRAAEGIYDCKDKR------DDVKSEDEDGQT-KLKQRRSRTNFTLEQ 130

Query:   110 LEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L ELE+ F  +HYPD + RE L+ + G++E RVQ
Sbjct:   131 LNELERLFDETHYPDAFMREELSQRLGLSEARVQ 164


>ZFIN|ZDB-GENE-070330-1 [details] [associations]
            symbol:drgx "dorsal root ganglia homeobox"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-070330-1 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG106743
            CTD:644168 EMBL:AY753211 IPI:IPI00481333 RefSeq:NP_001032182.1
            UniGene:Dr.94366 ProteinModelPortal:Q3BD88 SMR:Q3BD88 STRING:Q3BD88
            GeneID:560399 KEGG:dre:560399 InParanoid:Q3BD88 NextBio:20883422
            Uniprot:Q3BD88
        Length = 287

 Score = 161 (61.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 31/50 (62%), Positives = 38/50 (76%)

Query:    94 LKRKQRRSRTTFTSAQLEELEKSFQRSHYPDIYTREALANKFGMTETRVQ 143
             L+RKQRR+RTTFT  QLE LE  F ++HYPD++ RE LA K  +TE RVQ
Sbjct:    38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQ 87

WARNING:  HSPs involving 334 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      163       163   0.00084  107 3  11 22  0.39    32
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  584
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  138 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:03
  No. of threads or processors used:  24
  Search cpu time:  18.51u 0.09s 18.60t   Elapsed:  00:00:15
  Total cpu time:  18.54u 0.09s 18.63t   Elapsed:  00:00:18
  Start:  Thu Aug 15 14:35:12 2013   End:  Thu Aug 15 14:35:30 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with gsb-n gsb-n gsb-n gooseberry-neuro	protein from Drosophila melanogaster	5.4e-53
BLAST match view associations BLAST with pax7a pax7a pax7a paired box gene 7a	gene_product from Danio rerio	6.1e-53
BLAST match view associations BLAST with prd prd prd paired	protein from Drosophila melanogaster	8.0e-53
BLAST match view associations BLAST with pax3 pax3 pax3 Paired box protein Pax-3	protein from Xenopus (Silurana) tropicalis	1.9e-44
BLAST match view associations BLAST with PAX6 PAX6 PAX6 Paired box protein Pax-6	protein from Gallus gallus	4.3e-38
BLAST match view associations BLAST with pax6b pax6b pax6b paired box gene 6b	gene_product from Danio rerio	1.1e-37
BLAST match view associations BLAST with Gga.30541 Gga.30541 Gga.30541 Uncharacterized protein	protein from Gallus gallus	4.0e-37
BLAST match view associations BLAST with vab-3 vab-3 vab-3	gene from Caenorhabditis elegans	2.4e-36
BLAST match view associations BLAST with vab-3 vab-3 vab-3 Protein VAB-3, isoform a	protein from Caenorhabditis elegans	2.4e-36
BLAST match view associations BLAST with toy toy toy twin of eyeless	protein from Drosophila melanogaster	5.5e-36
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Uncharacterized protein	protein from Gallus gallus	8.1e-35
BLAST match view associations BLAST with PAX5 PAX5 PAX5 B cell specific activator protein variant A delta 5	protein from Homo sapiens	8.1e-35
BLAST match view associations BLAST with PAX5 PAX5 PAX5 B cell specific activator protein variant A delta 5/9	protein from Homo sapiens	8.1e-35
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Paired box protein Pax-2	protein from Homo sapiens	1.1e-33
BLAST match view associations BLAST with pax6a pax6a pax6a paired box gene 6a	gene_product from Danio rerio	1.7e-33
BLAST match view associations BLAST with pax2a pax2a pax2a paired box gene 2a	gene_product from Danio rerio	6.2e-33
BLAST match view associations BLAST with pax8 pax8 pax8 Paired box protein Pax-8	protein from Xenopus laevis	2.6e-32
BLAST match view associations BLAST with pax8 pax8 pax8 Paired box protein Pax-8	protein from Xenopus (Silurana) tropicalis	3.3e-32
BLAST match view associations BLAST with Pax8 Pax8 Pax8 paired box gene 8	protein from Mus musculus	5.2e-32
BLAST match view associations BLAST with gsb gsb gsb gooseberry	protein from Drosophila melanogaster	6.0e-32
BLAST match view associations BLAST with pax2-a pax2-a pax2-a Paired box protein Pax-2-A	protein from Xenopus laevis	7.7e-32
BLAST match view associations BLAST with pax2b pax2b pax2b paired box gene 2b	gene_product from Danio rerio	8.8e-32
BLAST match view associations BLAST with Pax8 Pax8 Pax8 paired box 8	gene from Rattus norvegicus	1.1e-31
BLAST match view associations BLAST with PAX8 PAX8 PAX8 Paired box protein Pax-8	protein from Homo sapiens	1.3e-31
BLAST match view associations BLAST with PAX8 PAX8 PAX8 Paired box protein Pax-8	protein from Canis lupus familiaris	1.9e-31
BLAST match view associations BLAST with pax2-b pax2-b pax2-b Paired box protein Pax-2-B	protein from Xenopus laevis	2.1e-31
BLAST match view associations BLAST with I3LAG7 I3LAG7 I3LAG7 Uncharacterized protein	protein from Sus scrofa	1.1e-30
BLAST match view associations BLAST with PAX3 PAX3 PAX3 Uncharacterized protein	protein from Bos taurus	1.1e-30
BLAST match view associations BLAST with PAX3 PAX3 PAX3 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-30
BLAST match view associations BLAST with PAX3 PAX3 PAX3 Paired box protein Pax-3	protein from Homo sapiens	1.1e-30
BLAST match view associations BLAST with Pax3 Pax3 Pax3 paired box gene 3	protein from Mus musculus	1.1e-30
BLAST match view associations BLAST with pax3-b pax3-b pax3-b Paired box protein Pax-3-B	protein from Xenopus laevis	1.1e-30
BLAST match view associations BLAST with PAX8 PAX8 PAX8 Uncharacterized protein	protein from Bos taurus	1.2e-30
BLAST match view associations BLAST with Pax7 Pax7 Pax7 paired box gene 7	protein from Mus musculus	1.5e-30
BLAST match view associations BLAST with Pax7 Pax7 Pax7 paired box 7	gene from Rattus norvegicus	1.5e-30
BLAST match view associations BLAST with PAX8 PAX8 PAX8 Paired box protein Pax-8	protein from Pongo abelii	1.7e-30
BLAST match view associations BLAST with PAX7 PAX7 PAX7 Uncharacterized protein	protein from Bos taurus	2.1e-30
BLAST match view associations BLAST with PAX7 PAX7 PAX7 Uncharacterized protein	protein from Canis lupus familiaris	2.1e-30
BLAST match view associations BLAST with Pax-7 Pax-7 Pax-7 PAX7 protein	protein from Gallus gallus	2.2e-30
BLAST match view associations BLAST with PAX7 PAX7 PAX7 Paired box protein Pax-7	protein from Homo sapiens	2.7e-30
BLAST match view associations BLAST with pax7b pax7b pax7b paired box gene 7b	gene_product from Danio rerio	1.1e-29
BLAST match view associations BLAST with pax3b pax3b pax3b paired box gene 3b	gene_product from Danio rerio	1.8e-29
BLAST match view associations BLAST with pax3-a pax3-a pax3-a Paired box protein Pax-3-A	protein from Xenopus laevis	2.0e-29
BLAST match view associations BLAST with pax3a pax3a pax3a paired box gene 3a	gene_product from Danio rerio	7.1e-29
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Uncharacterized protein	protein from Bos taurus	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Uncharacterized protein	protein from Canis lupus familiaris	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Uncharacterized protein	protein from Canis lupus familiaris	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 B cell specific activator protein variant A delta 8/9	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Paired box protein Pax-5	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Paired box protein Pax-5	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Paired box protein Pax-5	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with PAX5 PAX5 PAX5 Paired box protein Pax-5	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with LOC100738189 LOC100738189 LOC100738189 Uncharacterized protein	protein from Sus scrofa	2.8e-27
BLAST match view associations BLAST with Pax5 Pax5 Pax5 paired box gene 5	protein from Mus musculus	2.8e-27
BLAST match view associations BLAST with pax5 pax5 pax5 Paired box protein Pax-5	protein from Xenopus laevis	9.4e-27
BLAST match view associations BLAST with pax8 pax8 pax8 paired box gene 8	gene_product from Danio rerio	9.4e-27
BLAST match view associations BLAST with F1SML3 F1SML3 F1SML3 Uncharacterized protein	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with I3LEF5 I3LEF5 I3LEF5 Uncharacterized protein	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with F1NEQ7 F1NEQ7 F1NEQ7 Uncharacterized protein	protein from Gallus gallus	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Uncharacterized protein	protein from Bos taurus	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Uncharacterized protein	protein from Canis lupus familiaris	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Uncharacterized protein	protein from Canis lupus familiaris	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Paired box protein Pax-2	protein from Homo sapiens	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Paired box protein Pax-2	protein from Homo sapiens	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Paired box protein Pax-2	protein from Homo sapiens	1.9e-26
BLAST match view associations BLAST with PAX2 PAX2 PAX2 Uncharacterized protein	protein from Sus scrofa	1.9e-26
BLAST match view associations BLAST with pax2 pax2 pax2 Paired box 2	protein from Ovis aries	1.9e-26
BLAST match view associations BLAST with Pax2 Pax2 Pax2 paired box gene 2	protein from Mus musculus	1.9e-26
BLAST match view associations BLAST with Pax2 Pax2 Pax2 paired box 2	gene from Rattus norvegicus	1.9e-26
BLAST match view associations BLAST with pax5 pax5 pax5 paired box gene 5	gene_product from Danio rerio	8.4e-26
BLAST match view associations BLAST with PAX4 PAX4 PAX4 Uncharacterized protein	protein from Bos taurus	2.1e-25
BLAST match view associations BLAST with I3LUF8 I3LUF8 I3LUF8 Uncharacterized protein	protein from Sus scrofa	2.2e-25
BLAST match view associations BLAST with pax1a pax1a pax1a paired box 1a	gene_product from Danio rerio	2.2e-25
BLAST match view associations BLAST with PAX4 PAX4 PAX4 Uncharacterized protein	protein from Canis lupus familiaris	4.4e-25
BLAST match view associations BLAST with PAX1 PAX1 PAX1 Paired box protein Pax-1	protein from Gallus gallus	4.6e-25
BLAST match view associations BLAST with Pax1 Pax1 Pax1 paired box 1	gene from Rattus norvegicus	4.6e-25
BLAST match view associations BLAST with pax9 pax9 pax9 paired box gene 9	gene_product from Danio rerio	4.6e-25
BLAST match view associations BLAST with pax1b pax1b pax1b paired box 1b	gene_product from Danio rerio	5.9e-25
BLAST match view associations BLAST with Pax4 Pax4 Pax4 paired box 4	gene from Rattus norvegicus	6.8e-25
BLAST match view associations BLAST with Pax1 Pax1 Pax1 paired box gene 1	protein from Mus musculus	8.2e-25
BLAST match view associations BLAST with Pax4 Pax4 Pax4 paired box gene 4	protein from Mus musculus	9.0e-25
BLAST match view associations BLAST with PAX1 PAX1 PAX1 Uncharacterized protein	protein from Bos taurus	9.1e-25
BLAST match view associations BLAST with PAX4 PAX4 PAX4 Paired box protein Pax-4	protein from Homo sapiens	9.9e-25
BLAST match view associations BLAST with PAX4 PAX4 PAX4 Paired box protein Pax-4	protein from Homo sapiens	1.0e-24
BLAST match view associations BLAST with PAX1 PAX1 PAX1 Uncharacterized protein	protein from Sus scrofa	1.1e-24
BLAST match view associations BLAST with PAX9 PAX9 PAX9 Paired box protein Pax-9	protein from Gallus gallus	1.2e-24