BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1907
(1320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust.
Identities = 264/356 (74%), Positives = 311/356 (87%), Gaps = 1/356 (0%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQRAGRAGRVAAGKCFRLYTAWAY+HE
Sbjct: 690 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 749
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 750 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 809
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 810 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 869
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 870 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 929
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+L
Sbjct: 930 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLL 988
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 989 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 1044
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 180/229 (78%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SAT+
Sbjct: 499 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATM 558
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 559 DTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 618
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 619 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 678
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 679 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 727
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/361 (52%), Positives = 270/361 (74%), Gaps = 9/361 (2%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRAYEEAAKRLKLEAESRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+AYEEA KRLK+ E R ++P+LR +SRR
Sbjct: 177 DLEERDAFAERVRQRDKDRTRNV-LERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 235
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTERERRDREHKRKLLELAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ ER++ ++KR++ +LA+E+ A E EK+
Sbjct: 236 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKL 295
Query: 571 Q---RYYMPKGTKG--PEKYEEVDEKEKVPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MPK T+G + V+E+ P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 296 EATNRYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 355
Query: 625 YELLLDNQ--IDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAV 682
Y+L+L+ + I+F++A L GN + + + ++K +I+ ++SLP++PF+++L+ A+
Sbjct: 356 YQLVLEEEETIEFVRATQLQGNEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAI 415
Query: 683 RDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVK 742
+HQVLIIEGETGSGKTTQIPQYL E G+T MKI CTQPRRVAAMSV+ARVA EMGVK
Sbjct: 416 ANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVK 475
Query: 743 LGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPG 802
LG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 476 LGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDIL 535
Query: 803 F 803
F
Sbjct: 536 F 536
Score = 263 bits (672), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 141/168 (83%), Gaps = 1/168 (0%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 878 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 937
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+LYHELV TT
Sbjct: 938 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 996
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 997 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 1044
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust.
Identities = 264/356 (74%), Positives = 311/356 (87%), Gaps = 1/356 (0%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQRAGRAGRVAAGKCFRLYTAWAY+HE
Sbjct: 687 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 746
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 747 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 806
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 807 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 866
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 867 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 926
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+L
Sbjct: 927 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLL 985
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 986 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 1041
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 180/229 (78%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SAT+
Sbjct: 496 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATM 555
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 556 DTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 615
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 616 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 675
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 676 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 724
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/361 (52%), Positives = 270/361 (74%), Gaps = 9/361 (2%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRAYEEAAKRLKLEAESRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+AYEEA KRLK+ E R ++P+LR +SRR
Sbjct: 174 DLEERDAFAERVRQRDKDRTRNV-LERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 232
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTERERRDREHKRKLLELAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ ER++ ++KR++ +LA+E+ A E EK+
Sbjct: 233 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKL 292
Query: 571 Q---RYYMPKGTKG--PEKYEEVDEKEKVPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MPK T+G + V+E+ P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 293 EATNRYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 352
Query: 625 YELLLDNQ--IDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAV 682
Y+L+L+ + I+F++A L G+ + + + ++K +I+ ++SLP++PF+++L+ A+
Sbjct: 353 YQLVLEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAI 412
Query: 683 RDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVK 742
+HQVLIIEGETGSGKTTQIPQYL E G+T MKI CTQPRRVAAMSV+ARVA EMGVK
Sbjct: 413 ANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVK 472
Query: 743 LGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPG 802
LG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 473 LGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDIL 532
Query: 803 F 803
F
Sbjct: 533 F 533
Score = 263 bits (672), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 141/168 (83%), Gaps = 1/168 (0%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 875 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 934
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+LYHELV TT
Sbjct: 935 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 993
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 994 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 1041
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 265/356 (74%), Positives = 310/356 (87%), Gaps = 1/356 (0%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQRAGRAGRVAAGKCFRLYTAWAY+HE
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 930
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+L
Sbjct: 931 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLL 989
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK GK+R ELG
Sbjct: 990 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTREELG 1045
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 181/229 (79%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SATL
Sbjct: 500 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATL 559
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 560 DTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 619
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 620 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 679
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 680 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 728
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/361 (52%), Positives = 272/361 (75%), Gaps = 9/361 (2%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRAYEEAAKRLKLEAESRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+AYEEA KRLK+ E R ++P+LR +SRR
Sbjct: 178 DLEERDAFAERVRQRDKDRTRNV-LERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 236
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTERERRDREHKRKLLELAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ ERR+ ++KR++ +LA+E+ A E EK+
Sbjct: 237 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKL 296
Query: 571 Q---RYYMPKGTKG-PEKYEE-VDEKEKVPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MP+ T+G P + + V+E+ P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 297 EATNRYHMPEETRGQPTRAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 356
Query: 625 YELLLDNQ--IDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAV 682
Y+L+L+ + I+F++A L G+ + + ++K +I+ ++SLP++PF+++L+ AV
Sbjct: 357 YQLVLEEEETIEFVRATQLQGDEEPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAV 416
Query: 683 RDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVK 742
+HQ+LIIEGETGSGKTTQIPQYL E G+T+ MKI CTQPRRVAAMSV+ARVA EMGVK
Sbjct: 417 ANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVK 476
Query: 743 LGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPG 802
LG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 477 LGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDIL 536
Query: 803 F 803
F
Sbjct: 537 F 537
Score = 263 bits (671), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 140/168 (83%), Gaps = 1/168 (0%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 879 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 938
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+LYHELV TT
Sbjct: 939 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTT 997
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK GK+R ELG
Sbjct: 998 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTREELG 1045
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 563 bits (1452), Expect = e-159, Method: Compositional matrix adjust.
Identities = 252/354 (71%), Positives = 303/354 (85%), Gaps = 1/354 (0%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YVIDPGF KQN+F++R+G+E L VV ISKA+ANQRAGRAGR GKCFRLYTAWAYKHEL
Sbjct: 654 YVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHEL 713
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E+ +PEIQR NLGN VLMLK+LGI+DL+HFDFLDPPP ETLV+ALEQLYALGALNH G+
Sbjct: 714 EEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGE 773
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGRRMAEFP DP M KM++ASEKY+C EEIVTIA+MLS N A+FYRPK ++IHAD+A
Sbjct: 774 LTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSA 833
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
RK F+ GDH+ L+N+YN+W ++ FS +WC EN++QHR+MKRARDVR+QL+GL++RVE+
Sbjct: 834 RKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEI 893
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
E S+ T+T+ IRKAITAGYFY+++KL +G YKT KH T HPNS LFEE PRWV+Y
Sbjct: 894 ETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVY 952
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL 1150
ELVFT+KEFMR+++EIES WLLEVAPHYYK RELED+TNKKMPK GKS +L
Sbjct: 953 FELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGKDL 1006
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/242 (77%), Positives = 209/242 (86%), Gaps = 1/242 (0%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFL+EPDLASYSVM+IDEAHERTLHTDILFGLVKDI RFR DLKLLISSATL
Sbjct: 461 MTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATL 520
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVF 119
DA+KFS FFDDAP+FRIPGRRFPVDIYYT+APEADY+DA +V+I+QIH TQPL GDILVF
Sbjct: 521 DAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVF 580
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
LTGQEEIET E L +R + LGSKIKELI LPVY+NLP+D+Q KIF PTP +ARKVVLAT
Sbjct: 581 LTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLAT 640
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
NIAETS+TID I YVIDPGF KQN+F++R+G+E L VV ISKA+ANQRAG P
Sbjct: 641 NIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKC 700
Query: 240 FR 241
FR
Sbjct: 701 FR 702
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/358 (52%), Positives = 263/358 (73%), Gaps = 17/358 (4%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKRAYEEAAKRLKLEAESRDKIIPKLRIES 508
D D ERD + R+ ++K+ T+NV ++D +E + + KLR ES
Sbjct: 155 DADIAERDALAARINKKEKDKTRNVMEKKRDDNKDKEGSS------------MDKLREES 202
Query: 509 RRKYLEKRKEDKVAELEADILDDEYLFSEQELTERERRDREHKRKLLELAKEHDKARELE 568
RR+YL+KRK DK+ ELEA + DD+ LF+ ++LT+RE+ D E+++K+LE K H KA ++
Sbjct: 203 RRQYLKKRKVDKLEELEAIVHDDQTLFAREKLTKREKADMEYRKKVLEYTKAHGKAGDVM 262
Query: 569 KVQRYYMPKGTKG--PEKYEEVDEKEKVPHYEQRKWEDEQMSSAIFRVGAKDREHQEQ-Y 625
K++RY++P + P +Y E DE++ P + KWE+EQ+ +++ +GAKD + +EQ +
Sbjct: 263 KMKRYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAKRKEQEF 322
Query: 626 ELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDH 685
ELLLD ++DFIQAL +PG ++ E TE +KKK++IEET+KSLP+Y F+ I+AV++H
Sbjct: 323 ELLLDEKVDFIQALQMPGTNEEVVE--TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEH 380
Query: 686 QVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGC 745
QVLIIEGETGSGKTTQ+PQYL+EAGF + +IGCTQPRRVAAMSV+ARVA+E+G KLG
Sbjct: 381 QVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGT 440
Query: 746 EVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
+VGY+IRFEDCTSE+T++KYMTDG L REFL+EPDLASYSVM+IDEAH + D F
Sbjct: 441 QVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILF 498
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 110/167 (65%), Positives = 139/167 (83%), Gaps = 1/167 (0%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GDH+ L+N+YN+W ++ FS +WC EN++QHR+MKRARDVR+QL+GL++RVE+E S+ T
Sbjct: 841 AGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSS-T 899
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+T+ IRKAITAGYFY+++KL +G YKT KH T HPNS LFEE PRWV+Y ELVFT+
Sbjct: 900 DTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTS 959
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL 1317
KEFMR+++EIES WLLEVAPHYYK RELED+TNKKMPK GKS +L
Sbjct: 960 KEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGKDL 1006
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust.
Identities = 232/352 (65%), Positives = 291/352 (82%), Gaps = 2/352 (0%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
+YVIDPGFCKQ FN RTGMESL + P+S+ASANQR GRAGRVA GKCFRL+TAWA+ +E
Sbjct: 754 IYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNE 813
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+NT+PEIQR NLGN VL+LK++GINDL++FDF+DPPP +TL+ ALEQLYALGALN G
Sbjct: 814 LEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRG 873
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LTKLGR+MAEFP+DP + KM++ASEKYKC EEI+TI +MLSV IFYRPKDK AD
Sbjct: 874 QLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADA 933
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
ARK FF GDHL L+N++NQW ++ ++ QWC+ENFIQHRSMKRA+DVR+QL L++RVE
Sbjct: 934 ARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVE 993
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ LVSN +T +IRK I +G+FY+ AKL KSG ++T KHNQ+V IHP+S LF+ P+WV+
Sbjct: 994 IPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVV 1053
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1147
YHELV TTKEFMRQ+ EI+S WL E+APH YK +++ D N+K+PK +GK +
Sbjct: 1054 YHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVND--NQKLPKNIGKKQ 1103
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/241 (73%), Positives = 201/241 (83%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFL+ PDLASYSV+IIDEAHERTLHTDILFGL+KDI RFR DLKLLISSAT+
Sbjct: 563 MTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATM 622
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA++FS++FD AP F IPGR++ V +YT+APEADY+DA VV++LQIH T+PLGDILVFL
Sbjct: 623 DAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFL 682
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEE++ E+LQ R R LG+KIKELII +YS LPTD+Q KIF PTPPNARKVVLATN
Sbjct: 683 TGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATN 742
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLTID IIYVIDPGFCKQ FN RTGMESL + P+S+ASANQR G P F
Sbjct: 743 IAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCF 802
Query: 241 R 241
R
Sbjct: 803 R 803
Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/385 (44%), Positives = 241/385 (62%), Gaps = 49/385 (12%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRAYEEAAKRL----KLEAESRDKIIPKLRI 506
+++E E S+R+K RD+ +TK + + E RL +LE E R
Sbjct: 233 EQREVKELSDRIKKRDEKSTKKKIVDDSETKESIERKNRLEQNEQLETE---------RT 283
Query: 507 ESRRKYLEKRKEDKVAELEADILDDEYLFSEQELTERERRDREHKRKLLELAKEHDKARE 566
+SRRKYL ++ ++ L+ +I ++ LF +Q+LTE+E +D E K+KL ELA + + E
Sbjct: 284 KSRRKYLVGEEQKRLILLKREIEEEYELFKDQKLTEQEIKDFEKKKKLYELASQ--RINE 341
Query: 567 LEKVQRYY-MPKGTKGPE-----------KYEEVDEKEKVPHY--EQRKWEDEQMSSAI- 611
++ YY +P K + K ++ ++ Y EQ++WE +M SAI
Sbjct: 342 SQQSDDYYQLPSEIKDKDSLLKSSYINDNKNKKGNDSSSSSSYNPEQKEWEQNRMKSAIS 401
Query: 612 -------FRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEK------QKK 658
+G + E+YE + ++QI+FI+ L + KG+ M K +
Sbjct: 402 ENRGLSTANIGGGN----EEYEYVFEDQIEFIKEEVLKQGQ-KGDGVMILKPGDDGSAQA 456
Query: 659 KLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKI 718
K+ I+E +KSLP+YP+++ LIDAVR++QVLII GETGSGKTTQIPQYLHEAGF+K KI
Sbjct: 457 KMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTG-KI 515
Query: 719 GCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
GCTQPRRVAAMSV+ARVAEE+G KLG EVGY+IRFEDCTS++T+++YMTDG L REFL+
Sbjct: 516 GCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTA 575
Query: 779 PDLASYSVMIIDEAHPKVYVIDPGF 803
PDLASYSV+IIDEAH + D F
Sbjct: 576 PDLASYSVLIIDEAHERTLHTDILF 600
Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 97/163 (59%), Positives = 132/163 (80%), Gaps = 2/163 (1%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL L+N++NQW ++ ++ QWC+ENFIQHRSMKRA+DVR+QL L++RVE+ LVSN +
Sbjct: 943 GDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDD 1002
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
T +IRK I +G+FY+ AKL KSG ++T KHNQ+V IHP+S LF+ P+WV+YHELV TTK
Sbjct: 1003 TDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTK 1062
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1314
EFMRQ+ EI+S WL E+APH YK +++ D N+K+PK +GK +
Sbjct: 1063 EFMRQIVEIQSSWLHEIAPHIYKEKDVND--NQKLPKNIGKKQ 1103
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/339 (61%), Positives = 269/339 (79%), Gaps = 2/339 (0%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
+VID GF KQN +N RTGMESL VP S+ASA+QRAGRAGRV GKCFRLYT Y +EL
Sbjct: 707 FVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNEL 766
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ T PEIQR NL N VL+LK+LGIN+L+ FDF+D PP ETL+ +LE LYALGALN+ G+
Sbjct: 767 DMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGE 826
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGR+MAEFP DPM+ K L+AS KY CVEE+++I SML ++FYRPKDKI+ AD A
Sbjct: 827 LTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKA 886
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
R NF GGDHL LL+I+N+W D DFS W ENF+Q++S+ RARDVR+QL L +RVE+
Sbjct: 887 RANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEI 946
Query: 1037 ELVSNPTETVN-IRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEELPRWV 1094
ELV+N +E+++ I+KAITAGYF + A+L +SG SY+T K NQTV IHP+SS+ E+ P+ +
Sbjct: 947 ELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVI 1006
Query: 1095 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELED 1133
+Y ELV TTKE+ RQ+TEI+ +WLLE++PHY+KP +E+
Sbjct: 1007 IYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEE 1045
Score = 355 bits (910), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/241 (69%), Positives = 198/241 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L REFL+EPDLASYSV+IIDEAHERTLHTDILFGLVKDI RFR DLK+LISSAT+
Sbjct: 515 LTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATI 574
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS +FD+APVF +PGRR+PVDIYYT PEA+YI A + +ILQIH TQP GDILVFL
Sbjct: 575 DAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFL 634
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQ+EIE +E +Q+ R LG +I E+I+ P+Y+NLP+++Q KIF PTPP ARKVVLATN
Sbjct: 635 TGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATN 694
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETS+TID + +VID GF KQN +N RTGMESL VP S+ASA+QRAG P F
Sbjct: 695 IAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCF 754
Query: 241 R 241
R
Sbjct: 755 R 755
Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 225/339 (66%), Gaps = 20/339 (5%)
Query: 484 EEAAKRLKLEAESRDKIIPKLRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQELTER 543
E A ++L + ES K+ +LR +SR++YL+ R + ++ L +I D+E LF+ ++LT+
Sbjct: 215 ELALRKLADDPESWRKLASELRKKSRQQYLKPRAQQQLEILRREIRDEEQLFAGEKLTQA 274
Query: 544 ERRDREHKRKLLELAKEHDK----ARELEKVQRYYMPKGTKGPEKYEEV--------DEK 591
E R+ E K++LL +A+E + A E + + Y+ +G ++ EEV +E
Sbjct: 275 EIRELEKKKELLRIAEERQRLEKQATEYQMPEDYFTEQGKLDRKRKEEVLYQRYKDSNEG 334
Query: 592 EK----VPHYEQRKWEDEQMSSAI-FRVGAKDREHQEQYELLLD--NQIDFIQALSLPGN 644
E+ + EQ++WE +Q++ A+ F ++Q++ + D QIDF+ L
Sbjct: 335 EQNEVTMGAAEQQRWEAQQINKALLFDQNEWLPPGEKQFDFVFDESQQIDFLLDTKLSAE 394
Query: 645 RDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
++MT+ + +K ++E ++KSLP+Y +K DL+ A+ ++QVL+I ETGSGKTTQ+PQ
Sbjct: 395 NPVDTDKMTDVKVEK-SLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQ 453
Query: 705 YLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIK 764
+LHEAG+TK KI CTQPRRVAAMSV+ARVA+EM V+LG EVGY+IRFE+ TSE+T+IK
Sbjct: 454 FLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIK 513
Query: 765 YMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
Y+TDG L REFL+EPDLASYSV+IIDEAH + D F
Sbjct: 514 YLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILF 552
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 138/188 (73%), Gaps = 13/188 (6%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL---GGDHLVLLNIYNQWADADFSTQWC 1174
L E + +Y+P+ +K M K+RA GGDHL LL+I+N+W D DFS W
Sbjct: 866 LGEASSLFYRPK------DKIM--EADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWA 917
Query: 1175 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVN-IRKAITAGYFYHIAKLSKS 1233
ENF+Q++S+ RARDVR+QL L +RVE+ELV+N +E+++ I+KAITAGYF + A+L +S
Sbjct: 918 RENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRS 977
Query: 1234 G-SYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
G SY+T K NQTV IHP+SS+ E+ P+ ++Y ELV TTKE+ RQ+TEI+ +WLLE++PHY
Sbjct: 978 GDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHY 1037
Query: 1293 YKPRELED 1300
+KP +E+
Sbjct: 1038 FKPENIEE 1045
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 246/331 (74%), Gaps = 1/331 (0%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YVIDPGF KQ FN + GM+SL V PIS+A+A QR+GRAGR GKC+RLYT A+K+E+
Sbjct: 796 YVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEM 855
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+++PEIQR NLGN VL +KA+GINDL++FDF+DPPP +TLV A+EQLY+LGAL+ G
Sbjct: 856 LASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGL 915
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGR+MAEFPLDP + KML+AS C +EI+T+ +MLSV +FYRPK+K AD
Sbjct: 916 LTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQK 974
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ FF GDHL LLN+Y W ++ FS WC+ENF+Q RS++RA+DVR+QLI ++ R ++
Sbjct: 975 KAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKL 1034
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
+++S I+KAI +G+F + +K + YKT Q V IHP+S+LF P WV+Y
Sbjct: 1035 DIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIY 1094
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
HELV TTKE+MR+V I+ KWL+E+AP ++K
Sbjct: 1095 HELVMTTKEYMREVCTIDPKWLVELAPKFFK 1125
Score = 311 bits (797), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 145/229 (63%), Positives = 190/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +P+L++YSV+I+DEAHERT+ TD+LFGL+K ++ R +LK+LI+SATL
Sbjct: 604 MTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATL 663
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A+KFS++F +A +F IPGR FPVDI YTK PEADY+DA +++++QIH ++P GDIL+FL
Sbjct: 664 EAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFL 723
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+ +IL +R++ LGS + +LIILPVYS LP++MQTKIF P PP +RKVV+ATN
Sbjct: 724 TGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATN 783
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YVIDPGF KQ FN + GM+SL V PIS+A+A QR+G
Sbjct: 784 IAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSG 832
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 115/148 (77%), Gaps = 3/148 (2%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGC 720
+I+E ++SLPI+P ++ + AV +HQ+L++ GETGSGKTTQ+ QYL EAG+ + KIGC
Sbjct: 500 SIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGT-RGKIGC 558
Query: 721 TQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQPRRVAAMSVS RVAEE G +LG EVGYAIRFEDCTS TIIK+MTDG L RE L +P+
Sbjct: 559 TQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPN 618
Query: 781 LASYSVMIIDEAHPKVYVIDP--GFCKQ 806
L++YSV+I+DEAH + D G KQ
Sbjct: 619 LSAYSVIILDEAHERTISTDVLFGLLKQ 646
Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 117/177 (66%), Gaps = 5/177 (2%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+E + ++K K + GDHL LLN+Y W ++ FS WC+EN
Sbjct: 954 MLSVQNVFYRPKEKQALADQKKAKFF-----QPEGDHLTLLNVYESWKNSKFSNPWCFEN 1008
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+Q RS++RA+DVR+QLI ++ R +++++S I+KAI +G+F + +K + YK
Sbjct: 1009 FVQARSLRRAQDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYK 1068
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
T Q V IHP+S+LF P WV+YHELV TTKE+MR+V I+ KWL+E+AP ++K
Sbjct: 1069 TLVEGQPVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFK 1125
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 180/331 (54%), Positives = 243/331 (73%), Gaps = 1/331 (0%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+DPGF KQN +N + G+ESL + PIS+ASA QRAGRAGR GKC+RLYT AY++E+
Sbjct: 803 YVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM 862
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
++PEIQRINLG L +KA+GINDL+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 863 PPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGL 922
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGR+MAEFPL+P + KMLLAS C +EI+T+ +M+ G IFYRP++K AD
Sbjct: 923 LTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQ-TGNIFYRPREKQAQADQK 981
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
R FF GDHL LL +Y W +FS WC+ENFIQ RS++RA+DVR+QL+ ++ + ++
Sbjct: 982 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKL 1041
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++V+ IRKAITAG+F+H A+ Y+T NQ V IHP+S+LF+ P WV+Y
Sbjct: 1042 DVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1101
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
H+LV TTKE+MR+VT I+ KWL+E+AP ++K
Sbjct: 1102 HDLVMTTKEYMREVTVIDPKWLVELAPRFFK 1132
Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 140/229 (61%), Positives = 185/229 (80%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L + +L+ YSV+++DEAHERT+HTD+LFGL+K +++ R DL+L+++SATL
Sbjct: 611 MTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATL 670
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS +F + +F IPGR FPV+I YTK PE DY+DA ++++LQIH T+P GDILVFL
Sbjct: 671 DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFL 730
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI++ + L +R++ LG + ELIILPVYS LP++MQ++IF P PP RKVV+ATN
Sbjct: 731 TGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATN 790
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAE SLTID I YV+DPGF KQN +N + G+ESL + PIS+ASA QRAG
Sbjct: 791 IAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAG 839
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/145 (64%), Positives = 115/145 (79%), Gaps = 1/145 (0%)
Query: 656 QKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK 715
Q+ KL+I+E ++SLPIY K++LI AV D+QVL++ GETGSGKTTQ+ QYL EAG+T K
Sbjct: 502 QRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT-K 560
Query: 716 MKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREF 775
KIGCTQPRRVAAMSV+ RVAEE G +LG EVGYAIRFEDCT T+IKYMTDG L RE
Sbjct: 561 GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 620
Query: 776 LSEPDLASYSVMIIDEAHPKVYVID 800
L + +L+ YSV+++DEAH + D
Sbjct: 621 LIDENLSQYSVIMLDEAHERTIHTD 645
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 118/177 (66%), Gaps = 5/177 (2%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+++ +Y+PRE + ++K K GDHL LL +Y W +FS WC+EN
Sbjct: 961 MIQTGNIFYRPREKQAQADQKRAKFFQPE-----GDHLTLLAVYEAWKAKNFSGPWCFEN 1015
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+DVR+QL+ ++ + ++++V+ IRKAITAG+F+H A+ Y+
Sbjct: 1016 FIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYR 1075
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
T NQ V IHP+S+LF+ P WV+YH+LV TTKE+MR+VT I+ KWL+E+AP ++K
Sbjct: 1076 TLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFK 1132
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 239/331 (72%), Gaps = 1/331 (0%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A QRAGRAGR GKC+RLYT AY+ E+
Sbjct: 853 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 912
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 913 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 972
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 973 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1031
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1032 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1091
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1092 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1151
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
HELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1152 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1182
Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 661 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 720
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 721 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 780
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 781 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 840
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 841 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 889
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 116/156 (74%), Gaps = 1/156 (0%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 544 GGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 603
Query: 708 EAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQPRRVAAMSV+ RV+EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 604 EAGYT-SRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 662
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
DG L RE L +PDL Y+++++DEAH + D F
Sbjct: 663 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLF 698
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 118/177 (66%), Gaps = 5/177 (2%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + GDHL LL +YN W + FS WCYEN
Sbjct: 1011 MLSVQNVFYRPKDKQALADQKKAKF-----HQTEGDHLTLLAVYNSWKNNKFSNPWCYEN 1065
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1066 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1125
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1126 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1182
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 239/331 (72%), Gaps = 1/331 (0%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A QRAGRAGR GKC+RLYT AY+ E+
Sbjct: 877 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 936
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 937 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 996
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 997 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1055
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1056 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1115
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1116 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1175
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
HELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1176 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1206
Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 685 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 744
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 745 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 804
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 805 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 864
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 865 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 913
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 116/156 (74%), Gaps = 1/156 (0%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 568 GGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 627
Query: 708 EAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQPRRVAAMSV+ RV+EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 628 EAGYT-SRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 686
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
DG L RE L +PDL Y+++++DEAH + D F
Sbjct: 687 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLF 722
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 118/177 (66%), Gaps = 5/177 (2%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + GDHL LL +YN W + FS WCYEN
Sbjct: 1035 MLSVQNVFYRPKDKQALADQKKAKF-----HQTEGDHLTLLAVYNSWKNNKFSNPWCYEN 1089
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1090 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1149
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1150 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1206
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/339 (51%), Positives = 240/339 (70%), Gaps = 4/339 (1%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+DPGF KQ +N ++GM+SL V PIS+A+A QR+GRAGR GKC+RLYT A++ E+
Sbjct: 828 YVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEM 887
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + +L LKA+GIN+LI FDF+D PP ++++ AL L+ L AL+ G
Sbjct: 888 LPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL 947
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGRRMAEFPL+P + K+L+ S C EE++TI +ML+V IFYRPK+K HAD
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQK 1006
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WC+ENFIQ RSMKRA+D+R+QL+G++ R ++
Sbjct: 1007 KAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKL 1066
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
+VS + ++KAI +G+F + AK Y+T Q V IHP+S+ F++ P WV+Y
Sbjct: 1067 LMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVY 1126
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST 1135
HELV TTKE+MR+VT I+ KWL+E AP ++K + DST
Sbjct: 1127 HELVMTTKEYMREVTAIDPKWLVEFAPSFFK---IGDST 1162
Score = 308 bits (790), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 140/229 (61%), Positives = 186/229 (81%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL+ YS++++DEAHERT+HTD+LFGL+K R R +LKL+I+SATL
Sbjct: 636 MTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATL 695
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D+ KFSE+F +AP+F IPGR FPV+I YT+ PE+DY++A ++++QIH T+P GD+LVFL
Sbjct: 696 DSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFL 755
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T E+L +R++ +G + ELIILPVY LP++MQT+IF P P RKVV+ATN
Sbjct: 756 TGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATN 815
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +N ++GM+SL V PIS+A+A QR+G
Sbjct: 816 IAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSG 864
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 116/151 (76%), Gaps = 1/151 (0%)
Query: 653 TEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
T ++ L++ E ++SLPI+ K++L++A+ D+Q+L++ GETGSGKTTQ+ QY EAG
Sbjct: 524 TYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLG 583
Query: 713 KDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
+ + KIGCTQPRRVAAMSV+ RVAEE G KLG +VGY IRFEDCTS+ TIIKYMTDG L
Sbjct: 584 R-RGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLL 642
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
RE L +PDL+ YS++++DEAH + D F
Sbjct: 643 RECLIDPDLSGYSLIMLDEAHERTIHTDVLF 673
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 122/185 (65%), Gaps = 8/185 (4%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+E +D ++K K + GDHL LL +YN W + FS WC+EN
Sbjct: 986 MLNVQNIFYRPKEKQDHADQKKAKF-----HQPEGDHLTLLAVYNSWKNHHFSQPWCFEN 1040
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RSMKRA+D+R+QL+G++ R ++ +VS + ++KAI +G+F + AK Y+
Sbjct: 1041 FIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYR 1100
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+ F++ P WV+YHELV TTKE+MR+VT I+ KWL+E AP ++K
Sbjct: 1101 TLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFK--- 1157
Query: 1298 LEDST 1302
+ DST
Sbjct: 1158 IGDST 1162
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 363 bits (931), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 236/342 (69%), Gaps = 1/342 (0%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+DPGF K N +N+R G+E L V PIS+A ANQR GRAGR GKC+RLYT A+ +E+
Sbjct: 771 YVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEM 830
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+NTVPEIQR NL + +LMLKA+GINDL+ FDF+DPPP ++ AL +LY L +L+ G
Sbjct: 831 LENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGK 890
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT LG+ M+ FP+DP + + LL+S +C +EIVTI SMLSV +FYRPKD+ + AD+
Sbjct: 891 LTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQN-VFYRPKDRQLEADSK 949
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LLN+Y +W A++S Q+C NF+ R +KRARDV+ Q+ + +++ +
Sbjct: 950 KAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGL 1009
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
+L+S ++ IRK +G+F + AK YKT V IHP+SSL+ + +V+Y
Sbjct: 1010 KLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMY 1069
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1138
H +V T++E+M QVT IE +WLLEVAPH+YK + E + KK
Sbjct: 1070 HSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKK 1111
Score = 285 bits (730), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 177/229 (77%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +P+++ YSV+++DEAHERT+ TD+LF L+K R +LK++++SATL
Sbjct: 579 MTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATL 638
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
++ KFSE+F + P+ IPG+ FPV++ Y++ P+ DYI+A + ++ IH + GDILVFL
Sbjct: 639 NSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFL 698
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI++C EIL DRV+ LG I EL+ILPVYS LP+++Q+KIF PTP +RKVV ATN
Sbjct: 699 TGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATN 758
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETS+TID I YV+DPGF K N +N+R G+E L V PIS+A ANQR G
Sbjct: 759 IAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKG 807
Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 149/251 (59%), Gaps = 15/251 (5%)
Query: 563 KARELEKVQRYYMPKGTKGPEKY---------EEVDEKEKVPHYEQRKWEDEQMSSAIFR 613
K ++++ ++Y MPK TK P + + + + ++R+ E + F
Sbjct: 373 KDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAIRDHREEKLRKKREIEQQIRKQQSFD 432
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
K+++ +L NQ+ + +++ E ++ ++ L I +++LP+Y
Sbjct: 433 DPTKNKKDSRNEIQMLKNQL-----IVTEWEKNRMNESISYGKRTSLPISAQRQTLPVYA 487
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSA 733
+ +LI AVRD+Q L+I GETGSGKTTQI QYL E GF+ M IGCTQPRRVAA+SV+
Sbjct: 488 MRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGM-IGCTQPRRVAAVSVAK 546
Query: 734 RVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
RVAEE+G K+G +VGY IRFED T T IKYMTDG L RE L +P+++ YSV+++DEAH
Sbjct: 547 RVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAH 606
Query: 794 PKVYVIDPGFC 804
+ D F
Sbjct: 607 ERTVATDVLFA 617
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 1118 LLEVAPHYYKP--RELE-DSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWC 1174
+L V +Y+P R+LE DS K G DHL LLN+Y +W A++S Q+C
Sbjct: 929 MLSVQNVFYRPKDRQLEADSKKAKFHHPYG--------DHLTLLNVYTRWQQANYSEQYC 980
Query: 1175 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSG 1234
NF+ R +KRARDV+ Q+ + +++ ++L+S ++ IRK +G+F + AK
Sbjct: 981 KTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQV 1040
Query: 1235 SYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
YKT V IHP+SSL+ + +V+YH +V T++E+M QVT IE +WLLEVAPH+YK
Sbjct: 1041 GYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYK 1100
Query: 1295 PRELEDSTNKK 1305
+ E + KK
Sbjct: 1101 AGDAESQSRKK 1111
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 355 bits (911), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 239/363 (65%), Gaps = 10/363 (2%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQRAGRAGRVAAGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A QRAGRAGR GKCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 173/248 (69%), Gaps = 7/248 (2%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------AR 173
LTGQEEI+ + ++ V LG ++ ++ I+P+YS LP Q +IF P PP R
Sbjct: 356 LTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGR 415
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITG 233
KVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 416 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475
Query: 234 FNPLSDFR 241
P FR
Sbjct: 476 TRPGKCFR 483
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 97/142 (68%), Gaps = 2/142 (1%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQPRRVAAMSV+ RVA+EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 12/215 (5%)
Query: 1084 SSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTL 1143
S+ E P ++V + ++ + +L V + +P E + + ++
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADE------ 612
Query: 1144 GKSR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1202
K R A + GDHL LLN+Y+ + S QWCY+NFI +RS+ A +VR+QL ++ R
Sbjct: 613 AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFN 672
Query: 1203 MELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1258
+ S + +NIRKA+ GYF +A L ++G Y T K NQ V +HP S++ + P
Sbjct: 673 LPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHP-STVLDHKP 731
Query: 1259 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
WVLY+E V TTK ++R T+I+ +WL+++AP YY
Sbjct: 732 EWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYY 766
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 355 bits (911), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 239/363 (65%), Gaps = 10/363 (2%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQRAGRAGRVAAGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A QRAGRAGR GKCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 173/248 (69%), Gaps = 7/248 (2%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------AR 173
LTGQEEI+ + ++ V LG ++ ++ I+P+YS LP Q +IF P PP R
Sbjct: 356 LTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGR 415
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITG 233
KVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 416 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475
Query: 234 FNPLSDFR 241
P FR
Sbjct: 476 TRPGKCFR 483
Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 97/142 (68%), Gaps = 2/142 (1%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQPRRVAAMSV+ RVA+EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 12/215 (5%)
Query: 1084 SSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTL 1143
S+ E P ++V + ++ + +L V + +P E + + ++
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADE------ 612
Query: 1144 GKSR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1202
K R A + GDHL LLN+Y+ + S QWCY+NFI +RS+ A +VR+QL ++ R
Sbjct: 613 AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFN 672
Query: 1203 MELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1258
+ S + +NIRKA+ GYF +A L ++G Y T K NQ V +HP S++ + P
Sbjct: 673 LPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHP-STVLDHKP 731
Query: 1259 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
WVLY+E V TTK ++R T+I+ +WL+++AP YY
Sbjct: 732 EWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYY 766
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 355 bits (910), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 239/363 (65%), Gaps = 10/363 (2%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQRAGRAGRVAAGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A QRAGRAGR GKCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 254 bits (648), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 173/248 (69%), Gaps = 7/248 (2%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------AR 173
LTGQEEI+ + ++ V LG ++ ++ I+P+YS LP Q +IF P PP R
Sbjct: 356 LTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGR 415
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITG 233
KVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 416 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475
Query: 234 FNPLSDFR 241
P FR
Sbjct: 476 TRPGKCFR 483
Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 97/142 (68%), Gaps = 2/142 (1%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQPRRVAAMSV+ RVA+EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 12/215 (5%)
Query: 1084 SSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTL 1143
S+ E P ++V + ++ + +L V + +P E + + ++
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADE------ 612
Query: 1144 GKSR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1202
K R A + GDHL LLN+Y+ + S QWCY+NFI +RS+ A +VR+QL ++ R
Sbjct: 613 AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFN 672
Query: 1203 MELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1258
+ S + +NIRKA+ GYF +A L ++G Y T K NQ V +HP S++ + P
Sbjct: 673 LPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHP-STVLDHKP 731
Query: 1259 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
WVLY+E V TTK ++R T+I+ +WL+++AP YY
Sbjct: 732 EWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYY 766
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 353 bits (906), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 174/356 (48%), Positives = 238/356 (66%), Gaps = 6/356 (1%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
VYVIDPGF KQ +N R +ESL V PISKASA+QR+GRAGR GKCFRLYT ++ ++
Sbjct: 365 VYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNND 424
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L+ T PEI R NL N VL LK LGI+DL+HFDF+DPP ETL+ ALE L LGAL+ G
Sbjct: 425 LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEG 484
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LTK G M+EFPLDP M KML+ S ++ C EI+++++MLSV F RP++ AD
Sbjct: 485 NLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNC-FVRPREAQKAADE 543
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
A+ F + GDHL LLN+Y+ + + WC+ENF+ +R+MK A +VR+QL+ ++ R
Sbjct: 544 AKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFN 603
Query: 1036 MELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1091
+++ S + VNIRKA+ AGYF +A L ++G Y T K NQ V +HP++ L + P
Sbjct: 604 LKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKP 662
Query: 1092 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1147
WV+Y+E V TT+ F+R VT+I +WL++VA HYY + K+ + L K R
Sbjct: 663 EWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYKKR 718
Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/248 (53%), Positives = 177/248 (71%), Gaps = 7/248 (2%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +++P L Y V+I+DEAHERTL TD+LFGL+K+++R R DLKL++ SATL
Sbjct: 167 LTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATL 226
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A+KF E+F AP+ ++PGR PV+I+YT+ PE DY++A + +++QIH +P GDILVFL
Sbjct: 227 EAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFL 286
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP-------PNAR 173
TG+EEIE + V LG ++ + ++P+YS LP MQ KIF P P P R
Sbjct: 287 TGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGR 346
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITG 233
K+V++TNIAETSLTID I+YVIDPGF KQ +N R +ESL V PISKASA+QR+G
Sbjct: 347 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGR 406
Query: 234 FNPLSDFR 241
P FR
Sbjct: 407 TRPGKCFR 414
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 106/152 (69%), Gaps = 5/152 (3%)
Query: 657 KKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKM 716
++ I E ++ LP++ K D ++ + +Q LI+ GETGSGKTTQIPQ++ +A +
Sbjct: 53 QRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSD 112
Query: 717 K-----IGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
K +GCTQPRRVAAMSVS RVA+EM V +G EVGY+IRFEDCTS RT++KY+TDG L
Sbjct: 113 KGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGML 172
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
RE +++P L Y V+I+DEAH + D F
Sbjct: 173 LREAMADPLLERYKVIILDEAHERTLATDVLF 204
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 131/234 (55%), Gaps = 12/234 (5%)
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1145
+ E P +++ + EF + +L V + +PRE + + ++ K
Sbjct: 492 IMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADE------AK 545
Query: 1146 SR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
+R + GDHL LLN+Y+ + + WC+ENF+ +R+MK A +VR+QL+ ++ R ++
Sbjct: 546 ARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLK 605
Query: 1205 LVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1260
+ S + VNIRKA+ AGYF +A L ++G Y T K NQ V +HP++ L + P W
Sbjct: 606 MCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKPEW 664
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1314
V+Y+E V TT+ F+R VT+I +WL++VA HYY + K+ + L K R
Sbjct: 665 VIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYKKR 718
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase F56D2.6
OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 348 bits (892), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/375 (47%), Positives = 237/375 (63%), Gaps = 10/375 (2%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S+ I V+VIDPGF KQ +N R +ESL V PISKAS
Sbjct: 354 NGAISRKCVISTNIAETSLTI----DGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKAS 409
Query: 828 ANQRAGRAGRVAAGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A QRAGRAGR GKCFRLYT AY E++D T PEI R NLG+ VL LK LG DL+HF
Sbjct: 410 AMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHF 469
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L A+N G+LT+LG MAEFPLDP + KML+ S + C
Sbjct: 470 DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSN 529
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
EI++I +MLSV + RP + AD A+ F + GDHL LLN+Y+ + QWC
Sbjct: 530 EILSITAMLSV-PQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWC 588
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +R+MK A VR QL ++ + + VS ++ +NIRKA+ AG+F +A L
Sbjct: 589 YDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHL 648
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
+SG Y T K NQ V +HP S++ + P W LY+E V TTK F+R VT++ +WLL++AP
Sbjct: 649 ERSGHYVTVKDNQLVNLHP-STVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAP 707
Query: 1124 HYYKPRELEDSTNKK 1138
YY D K+
Sbjct: 708 QYYDLDNFPDGDTKR 722
Score = 256 bits (654), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 171/247 (69%), Gaps = 7/247 (2%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TDG L RE ++ P L Y V+I+DEAHERTL TDIL GL+K+IVR R+D+K++I SATLD
Sbjct: 181 TDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLD 240
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVFL 120
A KF +F+D P+ +PGR FPV+I++T E DY++A + +++QIH + + GDIL+FL
Sbjct: 241 AGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFL 300
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------ARK 174
TGQEEIE + + ++ LG+ L +P+YS LP Q +IF P PPN +RK
Sbjct: 301 TGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRK 360
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGF 234
V++TNIAETSLTID +++VIDPGF KQ +N R +ESL V PISKASA QRAG
Sbjct: 361 CVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRT 420
Query: 235 NPLSDFR 241
P FR
Sbjct: 421 KPGKCFR 427
Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 101/148 (68%), Gaps = 11/148 (7%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK---- 717
I E + LP++ +K+ ++ +R++Q + + GETGSGKTTQIPQ+ E F K + +
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVE--FMKQQQQGQPP 126
Query: 718 -----IGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
+ CTQPRRVAAMSV+ RVAEEM V LG EVGY+IRFEDC SERT++KY TDG L
Sbjct: 127 GQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLL 186
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVID 800
RE ++ P L Y V+I+DEAH + D
Sbjct: 187 REAMNSPLLDKYKVLILDEAHERTLATD 214
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 123/227 (54%), Gaps = 12/227 (5%)
Query: 1084 SSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTL 1143
SL E P +++ T+ E + +L V + +P E+ ++
Sbjct: 503 GSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADE------ 556
Query: 1144 GKSR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1202
K+R A + GDHL LLN+Y+ + QWCY+NFI +R+MK A VR QL ++ +
Sbjct: 557 AKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYN 616
Query: 1203 MELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1258
+ VS ++ +NIRKA+ AG+F +A L +SG Y T K NQ V +HP S++ + P
Sbjct: 617 LRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP-STVLDHKP 675
Query: 1259 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1305
W LY+E V TTK F+R VT++ +WLL++AP YY D K+
Sbjct: 676 EWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKR 722
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 347 bits (890), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 165/332 (49%), Positives = 229/332 (68%), Gaps = 2/332 (0%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+DPGF KQ+ F+ + GM+SL V PIS+A A QR+GRAGR GKC+RLYT AY++E+
Sbjct: 799 YVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEM 858
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ +PEIQR NL + +LMLKA+GINDL++FDF+DPPP +T++ AL+ LYAL AL+ G
Sbjct: 859 LPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGL 918
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT LGR+MA+FP++P + K+L+ S + C EE+++I +MLSV I+ RP++K AD
Sbjct: 919 LTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREKQQEADRQ 977
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
R F DHL LLN+Y W S WCYE++IQ R M+RA DVR+QLI L+ R
Sbjct: 978 RAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRH 1037
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKL-SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+VS + I +A+ +GYF ++AK S G YKT N V +HP+ LF + WV+
Sbjct: 1038 PVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVI 1097
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
YHEL+ T+KE+M V+ + KWL+EVAP ++K
Sbjct: 1098 YHELIQTSKEYMHTVSTVNPKWLVEVAPTFFK 1129
Score = 302 bits (774), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/229 (61%), Positives = 182/229 (79%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +P L+ YSV+I+DEAHERT+ TD+LFGL+K V R DLKL+++SATL
Sbjct: 607 MTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATL 666
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA++FS +F P+F IPGR +PV+I YTK PEADY+DA +++++QIH ++ GDILVFL
Sbjct: 667 DAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFL 726
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R + LG I EL+ILPVYS LP+++Q++IF P PP RKVV+ATN
Sbjct: 727 TGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATN 786
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ+ F+ + GM+SL V PIS+A A QR+G
Sbjct: 787 IAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSG 835
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 109/148 (73%)
Query: 656 QKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK 715
++ L+++E ++ LP++ ++ ++AV +Q+L++ GETGSGKTTQI QYL E G+T D
Sbjct: 497 KRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDS 556
Query: 716 MKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREF 775
IGCTQPRRVAAMSV+ RVAEE+G ++G EVGY IRFED TS T IKYMTDG L RE
Sbjct: 557 KMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQREC 616
Query: 776 LSEPDLASYSVMIIDEAHPKVYVIDPGF 803
L +P L+ YSV+I+DEAH + D F
Sbjct: 617 LVDPLLSKYSVIILDEAHERTVATDVLF 644
Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 106/181 (58%), Gaps = 12/181 (6%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGG---DHLVLLNIYNQWADADFSTQWC 1174
+L V + +PRE + +++ RA+ DHL LLN+Y W S WC
Sbjct: 957 MLSVPNIWSRPREKQQEADRQ--------RAQFANPESDHLTLLNVYTTWKMNRCSDNWC 1008
Query: 1175 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKL-SKS 1233
YE++IQ R M+RA DVR+QLI L+ R +VS + I +A+ +GYF ++AK S
Sbjct: 1009 YEHYIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHE 1068
Query: 1234 GSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
G YKT N V +HP+ LF + WV+YHEL+ T+KE+M V+ + KWL+EVAP ++
Sbjct: 1069 GCYKTIVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFF 1128
Query: 1294 K 1294
K
Sbjct: 1129 K 1129
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 340 bits (871), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 154/341 (45%), Positives = 233/341 (68%), Gaps = 3/341 (0%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
++VIDPGFCK +N R GM++L++ P+S+ASANQR GRAGR G+C+RLYT +K E
Sbjct: 728 LFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDE 787
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPEIQR NL N VL+LK+LG++DL+ F F+D PP + ++ ++ QL+ LGAL++ G
Sbjct: 788 LLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTG 847
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT +GR+M EFPLDP + KML+ S + C +E++TI SMLSV AIF+RPK + AD
Sbjct: 848 QLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVP-AIFFRPKGREEEADA 906
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
++ F + DHL LN+Y QW +S +WC +N++ +++K+ R+VR QL ++Q ++
Sbjct: 907 KKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLK 966
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
+ L+SN +E +RK I + YF++ A+L G Y + +HP S+LF +P +
Sbjct: 967 LPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDY 1026
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDS 1134
V+YHEL+ T KE+M+ VT +++ WL E+ P +Y +E + S
Sbjct: 1027 VVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQS 1067
Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 172/242 (71%), Gaps = 2/242 (0%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L + L YS +I+DEAHER+L+TD+LFGL+++++ R+DLKL+++SAT+
Sbjct: 537 MTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATM 596
Query: 61 DAQKFSEFFD-DAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVF 119
DA KF++FF + P F IPGR FPV++++ + P DY+DA V + IH GDIL+F
Sbjct: 597 DADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIF 656
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
+ GQE+IE E++++++ L + L +LP+YS LP+D+Q KIF P RK ++AT
Sbjct: 657 MPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVAT 715
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
NIAETSLT+D I++VIDPGFCK +N R GM++L++ P+S+ASANQR G P
Sbjct: 716 NIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQC 775
Query: 240 FR 241
+R
Sbjct: 776 YR 777
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGC 720
+I++ ++ LP++ +Q +++ +R++ V+II GETGSGKTTQ+ QYL E GF D IGC
Sbjct: 433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFG-DSGLIGC 491
Query: 721 TQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQPRRVAAMSV+ RVA+EMGV LG +VGYAIRFEDCTSE+TIIKYMTDG L RE L +
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGS 551
Query: 781 LASYSVMIIDEAHPKVYVIDPGF 803
L YS +I+DEAH + D F
Sbjct: 552 LDQYSAIIMDEAHERSLNTDVLF 574
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 108/186 (58%), Gaps = 7/186 (3%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +++P+ E+ + K K DHL LN+Y QW +S +WC +N
Sbjct: 887 MLSVPAIFFRPKGREEEADAKKEKFQVPE-----SDHLTFLNVYIQWRTHKYSAKWCADN 941
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
++ +++K+ R+VR QL ++Q +++ L+SN +E +RK I + YF++ A+L G Y
Sbjct: 942 YLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYV 1001
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP S+LF +P +V+YHEL+ T KE+M+ VT +++ WL E+ P +Y
Sbjct: 1002 NVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061
Query: 1296 RELEDS 1301
+E + S
Sbjct: 1062 KESKQS 1067
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 336 bits (862), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/356 (46%), Positives = 227/356 (63%), Gaps = 15/356 (4%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
++VID G+CK FN R GM++L + PIS+A+ANQR+GRAGR G+CFRLYT AYK+E
Sbjct: 818 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNE 877
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 878 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 937
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 938 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 996
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 997 IREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 1056
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 1057 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 1116
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
++YHELV TTKE+M+ VT ++ +WL E+ P +Y K GKSR E
Sbjct: 1117 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYS------------VKQAGKSRQE 1160
Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 173/241 (71%), Gaps = 1/241 (0%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 687
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 688 DAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 747
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 748 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 806
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLT+D I++VID G+CK FN R GM++L + PIS+A+ANQR+G P F
Sbjct: 807 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 866
Query: 241 R 241
R
Sbjct: 867 R 867
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 142/224 (63%), Gaps = 7/224 (3%)
Query: 577 KGTKGPEKYEEVDEKEKVPHYEQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFI 636
KG++ K+ E E++K H + WE + + + +E + + D ++D+
Sbjct: 446 KGSQTVRKHREQKERKKAQH---KHWE--LAGTKLGDIMGVKKEEEPDKAVTEDGKVDYR 500
Query: 637 QALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
+ + E +E KKK +I E ++ LPI+ +Q+L+ +RD+ ++I+ GETGS
Sbjct: 501 TEQKFADHMKRKSEASSEFAKKK-SILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGS 559
Query: 697 GKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDC 756
GKTTQ+ QYLHE G+T M IGCTQPRRVAAMSV+ RV+EEMG LG EVGYAIRFEDC
Sbjct: 560 GKTTQLTQYLHEDGYTDYGM-IGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDC 618
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
TSE T+IKYMTDG L RE L E DL YS +I+DEAH + D
Sbjct: 619 TSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTD 662
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 19/201 (9%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 977 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLTYLNVYLQWKNNNYSTIWCNDH 1031
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 1032 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 1091
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1092 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYS- 1150
Query: 1296 RELEDSTNKKMPKTLGKSRAE 1316
K GKSR E
Sbjct: 1151 -----------VKQAGKSRQE 1160
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 336 bits (861), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 235/352 (66%), Gaps = 10/352 (2%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
VYV+DPGF KQ +N R +ESL V PISKASA QRAGRAGR GKCFRLYT A++ E
Sbjct: 371 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKE 430
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L + T PEI R NL + VL LK LGI+DL+HFD++DPP ET++ ALE+L L L+ +G
Sbjct: 431 LIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNG 490
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
DLT LGR+ +EFPLDP + ML+ S ++ C E++++ ++LSV +F RP AD
Sbjct: 491 DLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPN-VFVRPNSARKLADE 549
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F GDHL LLN+Y+ + + + WC+ +F+ HR++ A +VR+QL ++R E
Sbjct: 550 MRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQE 609
Query: 1036 MELVSNPTET----VNIRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEEL 1090
+EL+S P + VNIR+A+ +G+F +AK S +G +Y T K NQ V +HP+ L
Sbjct: 610 VELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-SVT 668
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKT 1142
P WV+Y+E V TTK F+R VT I +WL+E+AP+YY +L+D N K K+
Sbjct: 669 PEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYY---DLDDFDNNKEVKS 717
Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 187/289 (64%), Gaps = 14/289 (4%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++ L+ YS +I+DEAHERTL TDIL GL+K + R DLK+++ SATL
Sbjct: 173 MTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATL 232
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF ++F DAP+ +PGR +PV+IYYT+ PE DY++A + ++LQIH + GDILVFL
Sbjct: 233 DAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFL 292
Query: 121 TGQEEIE-TCNEIL--QDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN-----A 172
TG+EEIE C +I D + R G+ L + P+Y +LP + Q +IF PTP +
Sbjct: 293 TGEEEIEDACRKITLEADDLVREGAA-GPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYG 351
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID I+YV+DPGF KQ +N R +ESL V PISKASA QRAG
Sbjct: 352 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 411
Query: 233 GFNPLSDFRGCAHVLGEEVLRG-CAHVLGEEVLRPEVSQPFRSFGYLGV 280
P FR + EE R E+LR +S LG+
Sbjct: 412 RTRPGKCFR----LYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGI 456
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY-LHEAGFTKDKMKIGC 720
I ET++ LP+Y +++ + ++Q+++ GETGSGKTTQIPQ+ L++ +I C
Sbjct: 68 ILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIAC 127
Query: 721 TQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQPRRVAAMSV+ RVA+EM V LG EVGY IRFEDC+ T++KYMTDG L RE +++
Sbjct: 128 TQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHM 187
Query: 781 LASYSVMIIDEAHPKVYVID 800
L+ YS +I+DEAH + D
Sbjct: 188 LSRYSCIILDEAHERTLATD 207
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 106/163 (65%), Gaps = 9/163 (5%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL LLN+Y+ + + + WC+ +F+ HR++ A +VR+QL ++R E+EL+S P +
Sbjct: 559 GDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFD 618
Query: 1212 T----VNIRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEELPRWVLYHEL 1266
VNIR+A+ +G+F +AK S +G +Y T K NQ V +HP+ L P WV+Y+E
Sbjct: 619 DKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-SVTPEWVVYNEF 677
Query: 1267 VFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKT 1309
V TTK F+R VT I +WL+E+AP+YY +L+D N K K+
Sbjct: 678 VLTTKSFIRNVTAIRPEWLIELAPNYY---DLDDFDNNKEVKS 717
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 335 bits (860), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/356 (46%), Positives = 227/356 (63%), Gaps = 15/356 (4%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
++VID G+CK FN R GM++L + PIS+A+ANQR+GRAGR G+CFRLYT AYK+E
Sbjct: 818 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNE 877
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 878 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 937
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 938 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 996
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 997 IREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 1056
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 1057 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 1116
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
++YHELV TTKE+M+ VT ++ +WL E+ P +Y K GKSR E
Sbjct: 1117 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYS------------VKQAGKSRQE 1160
Score = 269 bits (688), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 173/241 (71%), Gaps = 1/241 (0%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 687
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 688 DAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 747
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 748 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 806
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLT+D I++VID G+CK FN R GM++L + PIS+A+ANQR+G P F
Sbjct: 807 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 866
Query: 241 R 241
R
Sbjct: 867 R 867
Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 142/224 (63%), Gaps = 7/224 (3%)
Query: 577 KGTKGPEKYEEVDEKEKVPHYEQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFI 636
KG++ K+ E E++K H + WE + + + +E + L D ++D+
Sbjct: 446 KGSQTVRKHREQKERKKAQH---KHWE--LAGTKLGDIMGVKKEEEPDKSLTEDGKVDYR 500
Query: 637 QALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
+ K E +E KKK +I E ++ LPI+ +Q+L+ +RD+ ++I+ GETGS
Sbjct: 501 TEQKFADHMKKKSEASSEFAKKK-SILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGS 559
Query: 697 GKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDC 756
GKTTQ+ QYLHE G+T M IGCTQPRRVAAMSV+ RV+EEMG LG EVGYAIRFEDC
Sbjct: 560 GKTTQLTQYLHEDGYTDYGM-IGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDC 618
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
TSE T+IKYMTDG L RE L E DL YS +I+DEAH + D
Sbjct: 619 TSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTD 662
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 19/201 (9%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 977 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLSYLNVYLQWKNNNYSTIWCNDH 1031
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 1032 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 1091
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1092 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYS- 1150
Query: 1296 RELEDSTNKKMPKTLGKSRAE 1316
K GKSR E
Sbjct: 1151 -----------VKQAGKSRQE 1160
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 334 bits (856), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 226/348 (64%), Gaps = 6/348 (1%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
V+V+DPGF KQ +N R+ +ESL V PISKASANQRAGRAGR GKCFRLYT A+K
Sbjct: 361 VFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKEL 420
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+ T PEI R NL + VL L LG+ DL+HFDF+DPP +TL+ ALE L+ LGAL+ G
Sbjct: 421 MIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEG 480
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT++G M+EFPLDP + KML+ S + C EI+TIA+MLS F RPKD I AD+
Sbjct: 481 QLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNC-FMRPKDNRIEADS 539
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
A+K+F GDHL +LN+Y+ + WCY+NF+ HR++K+A VR QL ++ R +
Sbjct: 540 AKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFK 599
Query: 1036 MELVSNPTETV----NIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1091
+ LVS + NI+K I AG+F +AK K Y T Q+V+ HP++ L P
Sbjct: 600 LPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTRR-P 658
Query: 1092 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKM 1139
+ +Y+E V T++ ++R +T+++ WLLE+AP Y+K + T + +
Sbjct: 659 EFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKETI 706
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 188/282 (66%), Gaps = 9/282 (3%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +S+P L Y V+I+DEAHERTL TDILFGL+KDI++ R DLKL++ SATL
Sbjct: 174 LTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATL 233
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A KF ++F++AP+ ++PGR PV+I+YT+ DY+++ V +++ IH + GDILVFL
Sbjct: 234 EAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFL 293
Query: 121 TGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
TG+EEIE TC +I Q R G + + LP+YS+LP Q+KIF RK +++T
Sbjct: 294 TGEEEIEDTCAKI-QRETRERG--LPPMKTLPLYSSLPIYQQSKIF--DTCKERKCIVST 348
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
NIAETSLTID I++V+DPGF KQ +N R+ +ESL V PISKASANQRAG P
Sbjct: 349 NIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKC 408
Query: 240 FRGCAHVLGEEVLRGCAHVLGEEVLRPEVSQPFRSFGYLGVM 281
FR +E++ H E+LR ++ LGV+
Sbjct: 409 FRLYTEKAFKELMIQQTH---PEILRSNLASVVLQLLKLGVV 447
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 106/147 (72%)
Query: 657 KKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKM 716
K+ I E +K LP++ K+D I ++++QV+I+ GETGSGKTTQIPQ++ +AG +
Sbjct: 65 KRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGK 124
Query: 717 KIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
+G TQPRRVAA+SV+ RV+EEM +LG EVGY+IRFE+ +S RT +KY+TDG L RE +
Sbjct: 125 MVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESM 184
Query: 777 SEPDLASYSVMIIDEAHPKVYVIDPGF 803
S+P L Y V+I+DEAH + D F
Sbjct: 185 SDPTLNKYDVIILDEAHERTLSTDILF 211
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 1145 KSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
KS GDHL +LN+Y+ + WCY+NF+ HR++K+A VR QL ++ R ++
Sbjct: 542 KSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLP 601
Query: 1205 LVSNPTETV----NIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1260
LVS + NI+K I AG+F +AK K Y T Q+V+ HP++ L P +
Sbjct: 602 LVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTRR-PEF 660
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKM 1306
+Y+E V T++ ++R +T+++ WLLE+AP Y+K + T + +
Sbjct: 661 CIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKETI 706
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 319 bits (818), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 228/342 (66%), Gaps = 8/342 (2%)
Query: 793 HPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAY 852
H YV+D G+CK +NS+ G+++L V PIS+A+ANQRAGRAGR G +RLYT AY
Sbjct: 775 HGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAY 834
Query: 853 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN 912
E+ + T+PEIQR NL N VL+LK+LG+ ++ FDF+D PP++TL+ +L +L+ LGAL+
Sbjct: 835 IREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALD 894
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ G LT LG++M+ FP+DP + K+++ +E YKC EEI+TI SMLSV ++FYRPK++
Sbjct: 895 NFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSV-PSVFYRPKERAEE 953
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV- 1031
+D AR+ F + DHL+LLNIY W +S WC ++F+ +++KRARD+R+QL+ ++
Sbjct: 954 SDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMS 1013
Query: 1032 -QRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF--E 1088
Q++ +E VS+ +R+ + + YF+ A G Y + +H SSL+
Sbjct: 1014 KQKISLESVSDWD---IVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLG 1070
Query: 1089 ELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1130
LP +V+YHELV T+KE+M VT ++ WL E YY +E
Sbjct: 1071 YLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
Score = 277 bits (708), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 174/229 (75%), Gaps = 1/229 (0%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L + +L YSV+I+DEAHER+L+TDIL GL+K ++ R D+KLL++SAT+
Sbjct: 588 MTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATM 647
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
++QKFS+FF AP F IPGR +PVDI + KAP +DY++A V +LQIH +QP GDILVF+
Sbjct: 648 NSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFM 707
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQE+IE EI+ DR+ +L + L ILP+YS +P D+Q KIF P RKVV+ATN
Sbjct: 708 TGQEDIEATCEIIADRLNQLHDAPR-LSILPIYSQMPADLQAKIFDSAEPGVRKVVVATN 766
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLT+ I YV+D G+CK +NS+ G+++L V PIS+A+ANQRAG
Sbjct: 767 IAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAG 815
Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 116/162 (71%), Gaps = 2/162 (1%)
Query: 639 LSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGK 698
+ + G ++ ++ TE + K + E ++ LP + ++ L+ +RD+QVLI+ GETGSGK
Sbjct: 463 VKVAGRSEQSNKKDTEFARTK-SYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGK 521
Query: 699 TTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTS 758
TTQ+ Q+L+E G+ ++ M IGCTQPRRVAAMSV+ RV+EEMGV+LG VGY+IRFED T
Sbjct: 522 TTQLAQFLYEDGYHRNGM-IGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTG 580
Query: 759 ERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
T+IKYMTDG L RE L + +L YSV+I+DEAH + D
Sbjct: 581 PDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTD 622
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 14/185 (7%)
Query: 1118 LLEVAPHYYKPRE-LEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V +Y+P+E E+S + + +S DHL+LLNIY W +S WC +
Sbjct: 937 MLSVPSVFYRPKERAEESDAAREKFNVPES------DHLMLLNIYQHWQRNGYSNSWCSK 990
Query: 1177 NFIQHRSMKRARDVREQLIGLV--QRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSG 1234
+F+ +++KRARD+R+QL+ ++ Q++ +E VS+ +R+ + + YF+ A G
Sbjct: 991 HFLHSKTLKRARDIRQQLVEIMSKQKISLESVSDWD---IVRRVLCSAYFHQAACAKGIG 1047
Query: 1235 SYKTAKHNQTVMIHPNSSLF--EELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
Y + +H SSL+ LP +V+YHELV T+KE+M VT ++ WL E Y
Sbjct: 1048 EYVHLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVY 1107
Query: 1293 YKPRE 1297
Y +E
Sbjct: 1108 YSVKE 1112
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 313 bits (803), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 227/341 (66%), Gaps = 13/341 (3%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
VYV+DPGF KQ +N R +ESL V PISKASA QRAGRAGR GKCFRLYT A++ E
Sbjct: 389 VYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKE 448
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L + + PEI R NL + VL LK LGI+DL+HFDF+DPP ET++ ALE+L L L+ G
Sbjct: 449 LIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEG 508
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT LGR ++FPLDPM+ ML+ S +++C +EI+TI +MLSV +F RP AD
Sbjct: 509 NLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKDKKRADD 567
Query: 976 ARKNFFMLGGDHLVLLNIYNQW-ADADFST---QWCYENFIQHRSMKRARDVREQLIGLV 1031
A+ F GDH+ LLN+Y+ + +D + +WC ++++ +RS+ A ++R QL L+
Sbjct: 568 AKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLM 627
Query: 1032 QRVEMELVSNPTETV----NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNSS 1085
R +EL + E+ NIRKA+ +G+F +AK +SG+ Y T K NQ V+IHP++
Sbjct: 628 NRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVLIHPSTV 686
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
L + WV+Y+E V T+K ++R VT + +WL+E+AP YY
Sbjct: 687 LGHD-AEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYY 726
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/255 (50%), Positives = 174/255 (68%), Gaps = 21/255 (8%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE + + DL+ YS +I+DEAHERTL TDIL GL+K +V+ R DLK++I SATL
Sbjct: 191 MTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATL 250
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF +F+DAP+ +PGR +PV++YYT + DY+D+ + ++LQIHAT+ GDIL+FL
Sbjct: 251 DAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFL 310
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELI---------ILPVYSNLPTDMQTKIFLPTPPN 171
TG++EIE D VR++ + +L+ + P+Y +LP Q +IF P P +
Sbjct: 311 TGEDEIE-------DAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPES 363
Query: 172 -----ARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 226
RKVV++TNIAETSLTID I+YV+DPGF KQ +N R +ESL V PISKASA Q
Sbjct: 364 HNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQ 423
Query: 227 RAGVITGFNPLSDFR 241
RAG P FR
Sbjct: 424 RAGRAGRTRPGKCFR 438
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 107/152 (70%), Gaps = 3/152 (1%)
Query: 658 KKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY-LHEAGFTKDKM 716
K ++I + ++ LP++ + + + +++Q+++ GETGSGKTTQIPQ+ L + +
Sbjct: 82 KYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENT 141
Query: 717 KIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
++ CTQPRRVAAMSV+ RVAEEM VKLG EVGY+IRFE+ TS +TI+KYMTDG L RE +
Sbjct: 142 QVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAM 201
Query: 777 SEPDLASYSVMIIDEAHPKVYVID--PGFCKQ 806
+ DL+ YS +I+DEAH + D G KQ
Sbjct: 202 EDHDLSRYSCIILDEAHERTLATDILMGLLKQ 233
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 97/152 (63%), Gaps = 12/152 (7%)
Query: 1152 GDHLVLLNIYNQW-ADADFST---QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS 1207
GDH+ LLN+Y+ + +D + +WC ++++ +RS+ A ++R QL L+ R +EL +
Sbjct: 577 GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNT 636
Query: 1208 NPTETV----NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNSSLFEELPRWV 1261
E+ NIRKA+ +G+F +AK +SG+ Y T K NQ V+IHP++ L + WV
Sbjct: 637 TDYESPKYFDNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVLIHPSTVLGHD-AEWV 694
Query: 1262 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
+Y+E V T+K ++R VT + +WL+E+AP YY
Sbjct: 695 IYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYY 726
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 309 bits (792), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/334 (45%), Positives = 226/334 (67%), Gaps = 4/334 (1%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQRAGR GR +GKC+RLYT A+ +
Sbjct: 355 VYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFD-K 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + IF P ++ HA
Sbjct: 474 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPPNQKSHAI 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LNIY + + ++WC E+F+ ++ + RA VREQL L+ +
Sbjct: 533 RVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRW 1093
++ S+ + + + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRW
Sbjct: 593 QVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRW 652
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
V+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 653 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 166/242 (68%), Gaps = 14/242 (5%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GD+L FLTGQEE+ET +L ++ R R G K + L +LP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFER 330
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQR
Sbjct: 331 VSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQR 390
Query: 228 AG 229
AG
Sbjct: 391 AG 392
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 102/142 (71%), Gaps = 1/142 (0%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ + ++Q ++I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQPRRVAA++V+ RVAEE G LG EVGY IRF+DCT + T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YSV+++DEAH + D
Sbjct: 165 PLLTKYSVIMLDEAHERTLYTD 186
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 96/144 (66%), Gaps = 1/144 (0%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LNIY + + ++WC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 543 GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGD 602
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTT 1270
+ + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRWV+Y+E++ T+
Sbjct: 603 PDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTS 662
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYK 1294
K +MR VT IES WLLE+APH+Y+
Sbjct: 663 KYYMRDVTAIESAWLLELAPHFYQ 686
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 226/334 (67%), Gaps = 4/334 (1%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQRAGR GR +GKC+RLYT A+ +
Sbjct: 355 VYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFD-K 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + IF P ++ A
Sbjct: 474 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPPNQKSQAI 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ +
Sbjct: 533 RVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRW 1093
++ S+ + + + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRW
Sbjct: 593 QVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRW 652
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
V+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 653 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 166/242 (68%), Gaps = 14/242 (5%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GDIL FLTGQEE+ET +L ++ R R G K + L +LP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDILAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFER 330
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQR
Sbjct: 331 VSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQR 390
Query: 228 AG 229
AG
Sbjct: 391 AG 392
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 102/142 (71%), Gaps = 1/142 (0%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ + ++Q ++I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQPRRVAA++V+ RVAEE G LG EVGY IRF+DCT + T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YSV+++DEAH + D
Sbjct: 165 PLLTKYSVIMLDEAHERTLYTD 186
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 97/144 (67%), Gaps = 1/144 (0%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 543 GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGD 602
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTT 1270
+ + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRWV+Y+E++ T+
Sbjct: 603 PDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTS 662
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYK 1294
K +MR VT IES WLLE+APH+Y+
Sbjct: 663 KYYMRDVTAIESAWLLELAPHFYQ 686
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 304 bits (779), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 183/242 (75%), Gaps = 1/242 (0%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFL++ L+ YS ++IDEAHERTL TDIL GL+KDI+ R LKLLISSAT+
Sbjct: 322 MTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATM 381
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVF 119
+A+KFSEFFD+ P+F +PGRR+PVDI+YT PEA+YI A + +I QIH TQ L GDILVF
Sbjct: 382 NAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVF 441
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
LTGQEEIE L++ + +LGS+ K++II P+Y+NLP + Q KIF PTP N RKVVLAT
Sbjct: 442 LTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLAT 501
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
NIAETSLTID I YVIDPGF K+N++ TGM L VP S+AS +QRAG P
Sbjct: 502 NIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKC 561
Query: 240 FR 241
FR
Sbjct: 562 FR 563
Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 213/366 (58%), Gaps = 32/366 (8%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YVIDPGF K+N++ TGM L VP S+AS +QRAGRAGRV GKCFR++T W+Y HEL
Sbjct: 515 YVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHEL 574
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E PEI R NL N VL+L +LG+ DLI F +D P TL +LE LY LGALN G
Sbjct: 575 ELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGT 634
Query: 917 LTKLGRRMAEFPLDPMMGKML-LASEKYKC---VEEIVTIASMLSVNGAIFYRPKDKIIH 972
+T+LG+ M EFP +P K+L A+ +C +EE +TI SML ++F K
Sbjct: 635 ITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIGQK----- 689
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQL----- 1027
D A + DH++ L I+NQW ++ FS WC ++ IQ ++M R R++R QL
Sbjct: 690 RDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSE 749
Query: 1028 -IGLVQRVEMEL--VSNPTETVNIR--KAITAGYFYHIAKLSKSGSYKTAKHNQ---TVM 1079
+GLV++ + + N +N R + +G+ +I +L +G Y+T + V
Sbjct: 750 KVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVS 808
Query: 1080 IHPNSSLF-------EELPRWVLYHELVFTTKEFMRQVTEI-ESKWLLEVAPHYYKPREL 1131
+HP S LF + ++VLY +L+ T+KEF+R I + +WL+++ P +K +
Sbjct: 809 VHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFKDL-I 867
Query: 1132 EDSTNK 1137
+D TN+
Sbjct: 868 DDKTNR 873
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 142/218 (65%), Gaps = 18/218 (8%)
Query: 599 QRKWEDEQMSSAIFRVGAKDR------EHQEQYELLLDNQ--IDFIQALS--LPGNRDKG 648
QR WE++Q+ +A+ G D E ++Y+ + D ID+ LP + +
Sbjct: 141 QRMWEEQQLRNAM--AGQSDHPDDITLEGSDKYDYVFDTDAMIDYTNEEDDLLPEEKLQY 198
Query: 649 EEEMTE----KQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
E + + ++K+ L I+E +K LP++ +K +L+ ++ +QVLII GETGSGKTTQ+PQ
Sbjct: 199 EARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQ 258
Query: 705 YLHEAGFT-KDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFED-CTSERTI 762
YL E GFT + K++I TQPRRVAA SV+ARVA+EM V LG EVGY IRFED T +T+
Sbjct: 259 YLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTV 318
Query: 763 IKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
+KYMTDG L REFL++ L+ YS ++IDEAH + D
Sbjct: 319 LKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATD 356
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 99/178 (55%), Gaps = 23/178 (12%)
Query: 1148 AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQL------IGLVQRV 1201
+E+ DH++ L I+NQW ++ FS WC ++ IQ ++M R R++R QL +GLV++
Sbjct: 698 SEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKN 757
Query: 1202 EMEL--VSNPTETVNIR--KAITAGYFYHIAKLSKSGSYKTAKHNQ---TVMIHPNSSLF 1254
+ + N +N R + +G+ +I +L +G Y+T + V +HP S LF
Sbjct: 758 DQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVSVHPTSILF 816
Query: 1255 -------EELPRWVLYHELVFTTKEFMRQVTEI-ESKWLLEVAPHYYKPRELEDSTNK 1304
+ ++VLY +L+ T+KEF+R I + +WL+++ P +K ++D TN+
Sbjct: 817 VNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFKDL-IDDKTNR 873
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 285 bits (730), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 224/361 (62%), Gaps = 9/361 (2%)
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 831
HR+ + ++A SV I YVID G K FNS+ G+ESLTV PIS+++A QR
Sbjct: 363 HRKVVLSTNIAETSVTI----SGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQR 418
Query: 832 AGRAGRVAAGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLD 891
+GRAGR AAG+C+R+YT + +L T+PEI+RI+L AVL LKA G ND+I+F ++D
Sbjct: 419 SGRAGREAAGQCYRIYTEADFD-KLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMD 477
Query: 892 PPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVT 951
PP E L+ ALE LY++GAL+ +G + LG +M+ PL P + + +LA+ ++ C+ E++
Sbjct: 478 PPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVID 537
Query: 952 IASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADA--DFSTQWCYE 1009
+ S LS + ++F P++K A AR F GD L LN Q+ ++ D QWC +
Sbjct: 538 VVSCLSTD-SMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQ 596
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNP-TETVNIRKAITAGYFYHIAKLSKSGS 1068
NFI R++K D+R+QL + EL S+P + N+ + +GY + A L GS
Sbjct: 597 NFINRRALKTILDIRKQLREHCLKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDGS 656
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1128
Y+T NQT+ IHP+SSLF + ++YHELVFTTK ++R V+ I S WL VAPHY
Sbjct: 657 YRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLAR 716
Query: 1129 R 1129
R
Sbjct: 717 R 717
Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 167/229 (72%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +++P L+ Y +I+DEAHERTL TD+L G VK I++ R L+++I SATL
Sbjct: 192 LTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATL 251
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A++FSEFFD A + I GR++PV I+YT PE DY+DAC+ +I Q+H P GDILVFL
Sbjct: 252 NAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFL 311
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQ+EIE +++ ++L S + ++ P++++LP + Q ++FLP N RKVVL+TN
Sbjct: 312 TGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTN 371
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETS+TI I YVID G K FNS+ G+ESLTV PIS+++A QR+G
Sbjct: 372 IAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSG 420
Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 122/182 (67%), Gaps = 5/182 (2%)
Query: 628 LLDNQIDFIQALSLPGNRDKGEEEMTEKQ-KKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
L+ DF A + G+ + E+ +E K+ +I E +K+LPI+ L ++D++
Sbjct: 55 FLEQDTDF-GANEVVGSDNSSPEKRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNR 113
Query: 687 VLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCE 746
V+++ GETGSGK+TQIPQ+L+E + ++ + TQPRRVAA++++ RVA E G +LG +
Sbjct: 114 VIVVVGETGSGKSTQIPQFLNECPYAQEGC-VAITQPRRVAAVNLAKRVAAEQGCRLGEQ 172
Query: 747 VGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDP--GFC 804
VGY+IRF+D TS++T IKY+TDG L RE +++P L+ Y +I+DEAH + + D GF
Sbjct: 173 VGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFV 232
Query: 805 KQ 806
K+
Sbjct: 233 KK 234
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 1152 GDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP 1209
GD L LN Q+ ++ D QWC +NFI R++K D+R+QL + EL S+P
Sbjct: 570 GDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNSSP 629
Query: 1210 -TETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVF 1268
+ N+ + +GY + A L GSY+T NQT+ IHP+SSLF + ++YHELVF
Sbjct: 630 EVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVF 689
Query: 1269 TTKEFMRQVTEIESKWLLEVAPHYYKPR 1296
TTK ++R V+ I S WL VAPHY R
Sbjct: 690 TTKSYVRGVSSIRSNWLNAVAPHYLARR 717
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/274 (51%), Positives = 181/274 (66%), Gaps = 5/274 (1%)
Query: 767 TDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKA 826
+G + R+ + ++A S+ I V+VIDPGF KQ +N R +ESL V PISKA
Sbjct: 177 ANGAIGRKVVVSTNIAETSLTI----DGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKA 232
Query: 827 SANQRAGRAGRVAAGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIH 886
SA QR GRAGR GKCFRLYT AY E++DNT PEI R NLG VL LK LGI+DL+H
Sbjct: 233 SAQQRVGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVH 292
Query: 887 FDFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCV 946
FDF+DPP ETL+ ALE L LGAL+ GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 293 FDFMDPPAPETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCS 352
Query: 947 EEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQW 1006
EI+++ +MLSV F RP + AD A+ F + GDHL LLN+Y+ + + QW
Sbjct: 353 NEILSVTAMLSVPQC-FLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNEDPQW 411
Query: 1007 CYENFIQHRSMKRARDVREQLIGLVQRVEMELVS 1040
CY+NFIQ+RS+K A VR+QL ++ R ++ S
Sbjct: 412 CYDNFIQYRSLKSADSVRQQLARIMDRFALQRTS 445
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 174/248 (70%), Gaps = 7/248 (2%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+++DEAHERT+ TDIL GL+K++ + RSDLKL++ SATL
Sbjct: 4 MTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMSATL 63
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVF 119
DA KF +FD+AP+ +PGR PV+I+YT PE DY++A + +++QIH + + GD+L+F
Sbjct: 64 DAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLF 123
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------AR 173
LTGQEEIE + ++ V LG ++ +L +P+YS LP MQ +IF PPN R
Sbjct: 124 LTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPNKANGAIGR 183
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITG 233
KVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V PISKASA QR G
Sbjct: 184 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVGRAGR 243
Query: 234 FNPLSDFR 241
P FR
Sbjct: 244 TRPGKCFR 251
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1084 SSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTL 1143
S+ E P ++V + ++ + +L V + +P E KK+
Sbjct: 327 GSMMAEFPLDPQLAKMVIASTDYSCSNEILSVTAMLSVPQCFLRPNE-----AKKLADEA 381
Query: 1144 GKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1203
A + GDHL LLN+Y+ + + QWCY+NFIQ+RS+K A VR+QL ++ R +
Sbjct: 382 KMRFAHIDGDHLTLLNVYHAFKQNNEDPQWCYDNFIQYRSLKSADSVRQQLARIMDRFAL 441
Query: 1204 ELVS 1207
+ S
Sbjct: 442 QRTS 445
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 763 IKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
IKYMTDG L RE +++P L Y V+++DEAH + D
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATD 38
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 227/340 (66%), Gaps = 4/340 (1%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YVID G+ K +N + G++SL + PISKA+A+QR+GRAGR A G +RLYT +K ++
Sbjct: 652 YVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDM 711
Query: 857 EDNTVPEIQRINLGNAVLMLKALGIND-LIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
T+PEIQR NL N +L+LK+L + D L F F+D PP +T + +L +L+ +GA++ G
Sbjct: 712 YLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSG 771
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT LG +MA+FPL P + K+LL + + C +E++TI SMLSV +FYRPK++ AD
Sbjct: 772 QLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSV-PQVFYRPKERQKEADI 830
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR FF+ DHL LLN++ QW +FS+ WC ++F+Q++S+ RARD+R+QL+ +++ +
Sbjct: 831 ARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQK 890
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL--FEELPRW 1093
+ ++S+ + I+K I +G+ + AK++ +Y K +V +HP S+L +LP +
Sbjct: 891 IPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPY 950
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELED 1133
V+YHEL+ T+KE++ VT ++ WL+E Y + +++
Sbjct: 951 VVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIKRIKN 990
Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 166/252 (65%), Gaps = 11/252 (4%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE L + L YS +IIDEAHER+L+TDIL G K ++ R DLKL+I+SAT+
Sbjct: 449 VTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATM 508
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL--GDILV 118
+A+KFS FF +AP F IPGR FPV YT P DY++A V ++IH GDIL+
Sbjct: 509 NAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILI 568
Query: 119 FLTGQEEIETCNEILQDRVRRLGSK---------IKELIILPVYSNLPTDMQTKIFLPTP 169
F+TGQE+IET + LQ++ ++ SK I ++ ILP+YS LP D+Q KIF
Sbjct: 569 FMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLH 628
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK+++ATNIAETSLTI I YVID G+ K +N + G++SL + PISKA+A+QR+G
Sbjct: 629 GTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSG 688
Query: 230 VITGFNPLSDFR 241
P + +R
Sbjct: 689 RAGRTAPGTAYR 700
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 101/137 (73%), Gaps = 2/137 (1%)
Query: 659 KLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK- 717
K +I+ TK+ LP++ + L+ +R++QV++I GETGSGKTTQ+ QYL+E G+ D+ K
Sbjct: 340 KDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKS 399
Query: 718 IGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCT-SERTIIKYMTDGTLHREFL 776
I TQPRRVAA+SV+ RVA EM V LG EVGY+IRFED T SE T +K++TDG L RE L
Sbjct: 400 IVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETL 459
Query: 777 SEPDLASYSVMIIDEAH 793
+ L YS +IIDEAH
Sbjct: 460 LDDTLDKYSCVIIDEAH 476
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKT-LGKSRAELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V +Y+P+E + + K + KS DHL LLN++ QW +FS+ WC +
Sbjct: 811 MLSVPQVFYRPKERQKEADIARNKFFIAKS------DHLTLLNVFEQWRANNFSSHWCNK 864
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSY 1236
+F+Q++S+ RARD+R+QL+ +++ ++ ++S+ + I+K I +G+ + AK++ +Y
Sbjct: 865 HFVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNY 924
Query: 1237 KTAKHNQTVMIHPNSSL--FEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
K +V +HP S+L +LP +V+YHEL+ T+KE++ VT ++ WL+E Y
Sbjct: 925 VHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYD 984
Query: 1295 PRELED 1300
+ +++
Sbjct: 985 IKRIKN 990
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 260 bits (665), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 224/371 (60%), Gaps = 23/371 (6%)
Query: 768 DGTLH--REFLSEPDLASYSVMIIDEAHPKV-YVIDPGFCKQNNFNSRTGMESLTVVPIS 824
D T H R+ + ++A S+ I P + YVID G+ K ++ G+E+L V +S
Sbjct: 348 DSTPHGTRKVVVATNIAEASITI-----PGICYVIDTGYVKLRAQHAANGVETLMRVTVS 402
Query: 825 KASANQRAGRAGRVAAGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDL 884
KASA QRAGRAGR+ GKC+RLY ++ + TVPEIQR + + +L LKALG+ ++
Sbjct: 403 KASAEQRAGRAGRIRPGKCYRLYPESEFE-RFAEGTVPEIQRCQMASTILQLKALGVQNV 461
Query: 885 IHFDFLDPPPHETLVLALEQLYALGALNHHGDLTK-LGRRMAEFPLDPMMGKMLLASEKY 943
F +L PPP ++ LE LYALGA++ LT LG +MAEFPL PM K LL S ++
Sbjct: 462 HRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEF 521
Query: 944 KCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFS 1003
C E+VTI +M+ + +F P + AD RK F + GDH+ +LN++ ++ + S
Sbjct: 522 GCSTEMVTIVAMMQIQD-VFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRS 580
Query: 1004 TQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS-----NPTETVNIRKAITAGYFY 1058
+WC ++F+ +R + RA +VR QL+ L++R E+E VS N +E NIR+ + G+F
Sbjct: 581 KKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSE--NIRQCLVTGFFS 638
Query: 1059 HIAKLSKSGSYKTAKHNQTVMIHPNSSLF--EELPRWVLYHELVFTTKEFMRQVTEIESK 1116
A+ +G Y T K + ++ SS+ ++ P+WV++ E++ ++ +R VT IE +
Sbjct: 639 QAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVM---QDSIRDVTVIEPE 695
Query: 1117 WLLEVAPHYYK 1127
WL E+APHYY+
Sbjct: 696 WLYELAPHYYE 706
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 158/254 (62%), Gaps = 17/254 (6%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L++P L+ YS+++IDEAHER+ +TDIL GL++ I++ R+DL++++SSATL
Sbjct: 174 MTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATL 233
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+ F +FF D A + + GR PV +++TK DY + V +++ IH
Sbjct: 234 DAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKH 293
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKE---LIILPVYSNLPTDMQTKIFLP 167
+ GDILVFLTGQ+E+E E ++R L +K L ++P Y LP Q K F
Sbjct: 294 ENPGDILVFLTGQDEVEDVCE----KLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDS 349
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
TP RKVV+ATNIAE S+TI I YVID G+ K ++ G+E+L V +SKASA QR
Sbjct: 350 TPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQR 409
Query: 228 AGVITGFNPLSDFR 241
AG P +R
Sbjct: 410 AGRAGRIRPGKCYR 423
Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 96/136 (70%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
LNI++ + LPI+ + ++ ++ +II GETG GK+TQ+PQ+L EAG+ D +I
Sbjct: 68 LNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIV 127
Query: 720 CTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
TQPRRVA ++++ RVAEE LG +VGY +RF+D + + T +K+MTDG L RE L++P
Sbjct: 128 ITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADP 187
Query: 780 DLASYSVMIIDEAHPK 795
L+ YS+++IDEAH +
Sbjct: 188 LLSKYSIIMIDEAHER 203
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 23/216 (10%)
Query: 1089 ELPRWVLYHELVFTTKEF---MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1145
E P ++ + + + EF VT + + +V Y+ R D KK
Sbjct: 504 EFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKF------ 557
Query: 1146 SRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL 1205
A GDH+ +LN++ ++ + S +WC ++F+ +R + RA +VR QL+ L++R E+E
Sbjct: 558 --AVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEK 615
Query: 1206 VS-----NPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF--EELP 1258
VS N +E NIR+ + G+F A+ +G Y T K + ++ SS+ ++ P
Sbjct: 616 VSSRGLINCSE--NIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYP 673
Query: 1259 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
+WV++ E++ ++ +R VT IE +WL E+APHYY+
Sbjct: 674 KWVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYE 706
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 203/343 (59%), Gaps = 6/343 (1%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+D G K +N +G+E L V +SK A QR GRAGR +G C+RLYT ++ +
Sbjct: 359 YVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KF 417
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E TVPEIQR NL + +L L A+ + +++ FDF+ P + + A+ QL LGAL H D
Sbjct: 418 EKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDD 477
Query: 917 ---LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
LT +GR+MA FPL+P K +L S K+ C EEI+TI S+LSV+ ++ Y P +
Sbjct: 478 QLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVD-SVLYNPPARRDEV 536
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
+ RK F GDH+ LLNIY + + + WC ENF+ ++M +VR QL + +
Sbjct: 537 QSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLK 596
Query: 1034 VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1093
+ M ++S+ + ++R+ + F + A+L G+Y T +Q V IHP+S LF P
Sbjct: 597 MSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPAC 656
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1136
V+Y L++T K +MR + ++++WL E AP Y++ R+L + N
Sbjct: 657 VVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR-RKLRTARN 698
Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 154/235 (65%), Gaps = 6/235 (2%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL-----KLLI 55
+TDG L RE +S+ L YS +I+DEAHERT+HTD+LFG+VK + R +L K+++
Sbjct: 161 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIV 220
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
SAT+D FS++F+ APV + GR+ P+ I+YTK P+ DY+ A +VS+ QIH P
Sbjct: 221 MSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQ 280
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DILVFLTGQEEIE ++ +D R L +++LP+Y++LP Q ++F P RK
Sbjct: 281 DILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRK 340
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V+++TNIAETS+TI I YV+D G K +N +G+E L V +SK A QR G
Sbjct: 341 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTG 395
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
+E ++SLPI+ + L+ +R+ ++ GETGSGKTTQIPQYL+E G ++ + I T
Sbjct: 58 LELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGI-IAVT 116
Query: 722 QPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QPRRVAA+S++ RV++E +LG VGY +RFED TSE T IK++TDG L RE +S+ L
Sbjct: 117 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLL 176
Query: 782 ASYSVMIIDEAHPKVYVIDPGF 803
YS +I+DEAH + D F
Sbjct: 177 RKYSCVILDEAHERTIHTDVLF 198
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDH+ LLNIY + + + WC ENF+ ++M +VR QL + ++ M ++S+ +
Sbjct: 548 GDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGD 607
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
++R+ + F + A+L G+Y T +Q V IHP+S LF P V+Y L++T K
Sbjct: 608 MESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNK 667
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1303
+MR + ++++WL E AP Y++ R+L + N
Sbjct: 668 CYMRDLCVVDAEWLYEAAPDYFR-RKLRTARN 698
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 256 bits (655), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 201/343 (58%), Gaps = 6/343 (1%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+D G K +N +G+E L V +SK A QR GRAGR +G C+RLYT ++ +
Sbjct: 368 YVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KF 426
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ TVPEIQR NL + +L L A+ + +++ FDF+ P + + A+ QL LGAL H D
Sbjct: 427 DKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDD 486
Query: 917 ---LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
LT +GR+MA FPL+P K +L S K+ C EEI+TI S+LSV+ ++ + P +
Sbjct: 487 QLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVD-SVLHNPPSRREEV 545
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
RK F GDH+ LLNIY + + + WC ENF+ ++M +VR QL + +
Sbjct: 546 QGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLK 605
Query: 1034 VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1093
+ M + S+ + ++R+ + F A+L G+Y T +Q V IHP+S LF P
Sbjct: 606 MSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 665
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1136
V+Y EL++T K +MR + I+++WL E AP Y++ R+L + N
Sbjct: 666 VVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR-RKLRTARN 707
Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 154/235 (65%), Gaps = 6/235 (2%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL-----KLLI 55
+TDG L RE +S+ L YS +I+DEAHERT+HTD+LFG+VK + R +L K+++
Sbjct: 170 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIV 229
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
SAT+D FS++F+ APV + GR+ P+ ++YTK P+ DY+ A +VS+ QIH P
Sbjct: 230 MSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQ 289
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DILVFLTGQEEIE ++ +D + L +++LP+Y++LP Q ++F P RK
Sbjct: 290 DILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRK 349
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V+++TNIAETS+TI I YV+D G K +N +G+E L V +SK A QR G
Sbjct: 350 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTG 404
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
+E ++SLPI+ + L+ +R+ ++ GETGSGKTTQIPQYL+E G ++ + I T
Sbjct: 67 VELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGI-IAVT 125
Query: 722 QPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QPRRVAA+S++ RV++E +LG VGY +RF+D TSE T IK++TDG L RE +S+ L
Sbjct: 126 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLL 185
Query: 782 ASYSVMIIDEAH 793
YS +I+DEAH
Sbjct: 186 RKYSCVILDEAH 197
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDH+ LLNIY + + + WC ENF+ ++M +VR QL + ++ M + S+ +
Sbjct: 557 GDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGD 616
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
++R+ + F A+L G+Y T +Q V IHP+S LF P V+Y EL++T K
Sbjct: 617 VESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNK 676
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1303
+MR + I+++WL E AP Y++ R+L + N
Sbjct: 677 CYMRDLCVIDAQWLYEAAPEYFR-RKLRTARN 707
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A QR+GRAGR A+GKCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
D+ +PEI+R +L + VL LK L I+D+I F +LDPP ++ AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGH 478
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 479 VTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAE 537
Query: 977 RKNFFM---LGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
+K+ + GG D L I+ Q + WC +++I R + A V QL L+
Sbjct: 538 QKHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI 597
Query: 1032 QRVEM------ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNS 1084
++++ E P V +R+ + AGYF ++A+ S ++ T V IHP+S
Sbjct: 598 RKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSS 656
Query: 1085 SLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +L ++M
Sbjct: 657 ALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREM 715
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 153/247 (61%), Gaps = 18/247 (7%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS-----DLKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--AP----EADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYSNLPTDMQT 162
+ GDILVFLTGQ EIE E+L + + + L+ILP Y ++ TD Q
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQR 328
Query: 163 KIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKA 222
+IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L VVPISK+
Sbjct: 329 RIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKS 388
Query: 223 SANQRAG 229
A QR+G
Sbjct: 389 EALQRSG 395
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 109/154 (70%), Gaps = 3/154 (1%)
Query: 652 MTEKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEA 709
+ ++++K +E T + PI ++ LI AVRD+ LI+ G TGSGKTTQ+P+YL+EA
Sbjct: 34 IADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA 93
Query: 710 GFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDG 769
GF++ M IG TQPR+VAA+SV+ RVAEEM LG +VGY +RF+DC+S+ T IKYMTDG
Sbjct: 94 GFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDG 152
Query: 770 TLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
L + L +P+L +SV+I+DEAH + D F
Sbjct: 153 CLLKHILGDPNLNKFSVIILDEAHERTLTTDILF 186
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 1148 AELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM-- 1203
A+ GG D L I+ Q + WC +++I R + A V QL L+++++
Sbjct: 545 AKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQS 604
Query: 1204 ----ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNSSLFEELP 1258
E P V +R+ + AGYF ++A+ S ++ T V IHP+S+L E+
Sbjct: 605 DFPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQET 663
Query: 1259 R--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1306
+ W+++HE++ TTK + R V I +W+ ++ P H +L ++M
Sbjct: 664 KLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREM 715
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A QR+GRAGR A+GKCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
D+ +PEI+R +L + VL LK L I+D+I F +LDPP ++ AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGH 478
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 479 VTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAE 537
Query: 977 RKNFFM---LGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
+++ + GG D L I+ Q + WC +++I R + A V QL L+
Sbjct: 538 QRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI 597
Query: 1032 QRVEM------ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNS 1084
++++ E P V +R+ + AGYF ++A+ S ++ T V IHP+S
Sbjct: 598 RKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSS 656
Query: 1085 SLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +L ++M
Sbjct: 657 ALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREM 715
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 154/247 (62%), Gaps = 18/247 (7%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS-----DLKLLI 55
MTDG L + L +P+L+ +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--AP----EADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYSNLPTDMQT 162
+ GDILVFLTGQ EIE E+L + + + L+ILP Y ++ TD Q
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQR 328
Query: 163 KIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKA 222
+IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L VVPISK+
Sbjct: 329 RIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKS 388
Query: 223 SANQRAG 229
A QR+G
Sbjct: 389 EALQRSG 395
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 110/154 (71%), Gaps = 3/154 (1%)
Query: 652 MTEKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEA 709
+ ++++K +E T + PI ++ LI AVRD+ LI+ G TGSGKTTQ+P+YL+EA
Sbjct: 34 IADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA 93
Query: 710 GFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDG 769
GF++ M IG TQPR+VAA+SV+ RVAEEM LG +VGY +RF+DC+S+ T IKYMTDG
Sbjct: 94 GFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDG 152
Query: 770 TLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
L + L +P+L+ +SV+I+DEAH + D F
Sbjct: 153 CLLKHILGDPNLSKFSVIILDEAHERTLTTDILF 186
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 1148 AELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM-- 1203
A+ GG D L I+ Q + WC +++I R + A V QL L+++++
Sbjct: 545 AKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQS 604
Query: 1204 ----ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNSSLFEELP 1258
E P V +R+ + AGYF ++A+ S ++ T V IHP+S+L E+
Sbjct: 605 DFPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQET 663
Query: 1259 R--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1306
+ W+++HE++ TTK + R V I +W+ ++ P H +L ++M
Sbjct: 664 KLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREM 715
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 197/345 (57%), Gaps = 16/345 (4%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A QR+GRAGR A+GKCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
D+ +PEI+R +L + VL LK L I+D+I F +LDPP ++ AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGH 478
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 479 VTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAE 537
Query: 977 RKNFFM---LGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
+++ + GG D L I+ Q + WC +++I R + A V QL L+
Sbjct: 538 QRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI 597
Query: 1032 QRVEM------ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNS 1084
++++ E P V +R+ + AGYF ++A+ S ++ T V IHP+S
Sbjct: 598 RKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSS 656
Query: 1085 SLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
+L E+ + W+++HE++ TTK + R V I +W+ ++ P ++
Sbjct: 657 ALHEQETKLEWIVFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHE 701
Score = 209 bits (533), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 153/247 (61%), Gaps = 18/247 (7%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS-----DLKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--AP----EADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYSNLPTDMQT 162
+ GDILVFLTGQ EIE E+L + + + L+ILP Y ++ TD Q
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQR 328
Query: 163 KIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKA 222
+IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L VVPISK+
Sbjct: 329 RIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKS 388
Query: 223 SANQRAG 229
A QR+G
Sbjct: 389 EALQRSG 395
Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 114/167 (68%), Gaps = 8/167 (4%)
Query: 644 NRDKGEEE-----MTEKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
+RD EE + ++++K +E T + PI ++ +I AVRD+ LI+ G TGS
Sbjct: 21 SRDLQEERPSAVCIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGS 80
Query: 697 GKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDC 756
GKTTQ+P+YL+EAGF++ M IG TQPR+VAA+SV+ RVAEEM LG +VGY +RF+DC
Sbjct: 81 GKTTQLPKYLYEAGFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDC 139
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
+S+ T IKYMTDG L + L +P+L +SV+I+DEAH + D F
Sbjct: 140 SSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILF 186
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 1148 AELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM-- 1203
A+ GG D L I+ Q + WC +++I R + A V QL L+++++
Sbjct: 545 AKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQS 604
Query: 1204 ----ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNSSLFEELP 1258
E P V +R+ + AGYF ++A+ S ++ T V IHP+S+L E+
Sbjct: 605 DFPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQET 663
Query: 1259 R--WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
+ W+++HE++ TTK + R V I +W+ ++ P ++
Sbjct: 664 KLEWIVFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHE 701
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 198/345 (57%), Gaps = 16/345 (4%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A QR+GRAGR ++GKCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
D+ +PEI+R +L + VL LK L I+D+I F +LDPP ++ AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGH 478
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 479 VTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAE 537
Query: 977 RKNFFM---LGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
+++ + GG D L I+ Q + WC +++I R + A V QL L+
Sbjct: 538 QRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI 597
Query: 1032 QRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNS 1084
++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+S
Sbjct: 598 RKLKQQ-SDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSS 656
Query: 1085 SLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
+L E+ + W+++HE++ TTK + R V I +W+ ++ P ++
Sbjct: 657 ALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHE 701
Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 153/247 (61%), Gaps = 18/247 (7%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS-----DLKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--AP----EADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYSNLPTDMQT 162
+ GDILVFLTGQ EIE E+L + + + L+ILP Y ++ TD Q
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQR 328
Query: 163 KIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKA 222
+IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L VVPISK+
Sbjct: 329 RIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKS 388
Query: 223 SANQRAG 229
A QR+G
Sbjct: 389 EALQRSG 395
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 115/167 (68%), Gaps = 8/167 (4%)
Query: 644 NRDKGEEEMT-----EKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
+RD EE ++ ++++K +E T + PI ++ +I AVRD+ LI+ G TGS
Sbjct: 21 SRDLQEERLSAVCIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGS 80
Query: 697 GKTTQIPQYLHEAGFTKDKMKIGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDC 756
GKTTQ+P+YL+EAGF++ M IG TQPR+VAA+SV+ RVAEEM LG +VGY +RF+DC
Sbjct: 81 GKTTQLPKYLYEAGFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDC 139
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
+S+ T IKYMTDG L + L +P+L +SV+I+DEAH + D F
Sbjct: 140 SSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILF 186
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 1148 AELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL 1205
A+ GG D L I+ Q + WC +++I R + A V QL L+++++ +
Sbjct: 545 AKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQ- 603
Query: 1206 VSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNSSLFEELP 1258
P ET +R+ + AGYF ++A+ S ++ T V IHP+S+L E+
Sbjct: 604 SDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQET 663
Query: 1259 R--WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
+ W+++HE++ TTK + R V I +W+ ++ P ++
Sbjct: 664 KLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHE 701
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 191/344 (55%), Gaps = 14/344 (4%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
+VID G ++ +N R SL + PIS++ A R G ++GK F LYT ++
Sbjct: 354 FVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDM 413
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E+Q NL + VL +K + I L H DF++ P E+L+ ALE L L AL++ G+
Sbjct: 414 TPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGN 473
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
L++ G M+EFPLDP + K +LAS ++ CV+E++TIA+M++ + P A T
Sbjct: 474 LSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTC 533
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIG 1029
K F GDH L++IY + D ++ +WC + F+ +++ A +R +L+
Sbjct: 534 WKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLE 593
Query: 1030 LVQRVEMELV----SNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS 1084
+++R+E+ + T+NI+KA+ +GYF IA+ + SG+Y H Q +HP S
Sbjct: 594 IIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLS 653
Query: 1085 --SLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
S+ +++P WVL+H+ + ++R +EI + +++ P YY
Sbjct: 654 GYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 132/238 (55%), Gaps = 15/238 (6%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L SY V+I+D+ HER++ TD+L GL+KD++ R +LKL+I+S+
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHL 221
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
K + ++ + PV + + PV++ Y + D ++ + I +IH + GDI+VFL
Sbjct: 222 ISKLNSYYGNVPVIEVKNKH-PVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLA 280
Query: 122 GQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN-------AR 173
+++IE C + Q L + EL+++P+Y P + + +F P R
Sbjct: 281 CEQDIEKVCETVYQG--SNLNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQR 334
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVI 231
+VVL T+ E + +++ +VID G ++ +N R SL + PIS++ A R ++
Sbjct: 335 RVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQIL 392
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG--CTQP 723
++ LPI+ K ++ + +Q++I+ G+ GK+ Q+PQ+ E + G CTQ
Sbjct: 59 REDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVICTQV 118
Query: 724 RRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+ + ++ RVA+EM V +G EVGY I FE+C + TI++Y TD L RE +S P L S
Sbjct: 119 HKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFLGS 178
Query: 784 YSVMIIDEAHPKVYVID 800
Y V+I+D+ H + D
Sbjct: 179 YGVIILDDIHERSIATD 195
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 87/156 (55%), Gaps = 14/156 (8%)
Query: 1152 GDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GDH L++IY + D ++ +WC + F+ +++ A +R +L+ +++R+E+
Sbjct: 542 GDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIELP 601
Query: 1205 LV----SNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS--SLFEEL 1257
+ T+NI+KA+ +GYF IA+ + SG+Y H Q +HP S S+ +++
Sbjct: 602 YAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSGYSITKKM 661
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
P WVL+H+ + ++R +EI + +++ P YY
Sbjct: 662 PEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 792 AHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWA 851
+H +VID G ++ +N R SL + PIS++ A R G +GK F LYT
Sbjct: 350 SHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEF 409
Query: 852 YKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL 911
++ E+Q NL + VL +K + I L DF++ P E+L+ ALE L L AL
Sbjct: 410 ASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAAL 469
Query: 912 NHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
++ G+L++ G M+EFPLDP + K +LAS ++ CV+E++TIA+M++ + P
Sbjct: 470 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEE 529
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVR 1024
A T K F GDH L+N+YN + D ++ WC++ F+ +++ A +R
Sbjct: 530 AAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIR 589
Query: 1025 EQLIGLVQRVEMELV----SNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVM 1079
+L+ +++R+E+ + +NI+KA+ +GYF IA+ + SG+Y H Q
Sbjct: 590 AELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQ 649
Query: 1080 IHPNS--SLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
+HP S S+ +++P WVL+H+ + ++R + + + +++ P YY
Sbjct: 650 LHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 134/242 (55%), Gaps = 13/242 (5%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L SY V+I+D+ HER+L TD+L GL+KD++ R +LKL+++ + L
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLL 221
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
K S ++ D PV + + PV++ Y + D ++ + I +IH + GD++VFL
Sbjct: 222 TSKLSSYYGDVPVIEVRNKH-PVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLA 280
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN-------ARK 174
+++IE E++ L + +L+++P+Y P + + +F P R+
Sbjct: 281 CEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRR 336
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGF 234
VVL T+ E+ + + +VID G ++ +N R SL + PIS++ A R ++ G
Sbjct: 337 VVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL-GS 395
Query: 235 NP 236
+P
Sbjct: 396 SP 397
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG--CTQP 723
++ LPI+ K ++++ +QV+++ G++ GK++Q+PQ+ E + G CTQ
Sbjct: 59 REELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQA 118
Query: 724 RRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+ A+ ++ RVA+EM V +G EVGY I FE+C + TI++Y TD L RE +S P L S
Sbjct: 119 HKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGS 178
Query: 784 YSVMIIDEAHPKVYVID 800
Y V+I+D+ H + D
Sbjct: 179 YGVIILDDVHERSLATD 195
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 86/156 (55%), Gaps = 14/156 (8%)
Query: 1152 GDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GDH L+N+YN + D ++ WC++ F+ +++ A +R +L+ +++R+E+
Sbjct: 543 GDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAELLEIIKRIELP 602
Query: 1205 LV----SNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNSS--LFEEL 1257
+ +NI+KA+ +GYF IA+ + SG+Y H Q +HP SS + +++
Sbjct: 603 YAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKKM 662
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
P WVL+H+ + ++R + + + +++ P YY
Sbjct: 663 PEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 153/231 (66%), Gaps = 2/231 (0%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E +P L YS++I+DE HERTL TD+L G++K I+ R+D +L++SSA++
Sbjct: 122 MTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASV 181
Query: 61 DAQKFSEFF--DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILV 118
DA K S+FF D I G+ FPV+ + + P +Y+D+ + +++ I++T P GDILV
Sbjct: 182 DANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILV 241
Query: 119 FLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
FL+G++EIE C + ++D + + L+ LP+++ L D Q ++F + RKV+ +
Sbjct: 242 FLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFS 301
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TNIAETS+TID I+YV+D GF KQ +N T L VPISK+SA QR+G
Sbjct: 302 TNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSG 352
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 186/340 (54%), Gaps = 18/340 (5%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAY--- 852
VYV+D GF KQ +N T L VPISK+SA QR+GRAGR GK FRLYT AY
Sbjct: 315 VYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLM 374
Query: 853 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN 912
K E E +I ++ VL LK LG+ +++ F F PP L+ ALE LY LG L+
Sbjct: 375 KEEFE----ADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLD 430
Query: 913 HHGDLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
G+LT LG +++ LD + K LL S ++ C EI++IAS+L+ G +FY P
Sbjct: 431 ESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTA-GEVFYNPTSSSK 489
Query: 972 H-ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+ A A +FF GD + LN++ + QWC +N++ ++++++A D+R L+
Sbjct: 490 NDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRF 549
Query: 1031 VQRVEMELVSN--PTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE 1088
+ + + ++ I K + G+ ++A L GSYKT Q V + +S L E
Sbjct: 550 LNKFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHE 608
Query: 1089 ELPRWVLYHELVFT-TKEFMRQVTEIESKWLLEVAPHYYK 1127
+ W++Y V + T+ F++ +++IES WL YYK
Sbjct: 609 KKTPWIMYSSAVESETQIFVKNISKIESFWL----DKYYK 644
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
LNI+ KK LPI ++ L+ AV +Q+ I+ G TG GKTTQIPQ+L+EAG+ IG
Sbjct: 18 LNIQ--KKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIG 75
Query: 720 CTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
CTQPRR+ A SVS RV+ E+ G GY+I+F+ SE+T IKYMTDG L E +P
Sbjct: 76 CTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDP 135
Query: 780 DLASYSVMIIDEAHPKVYVID 800
L YS++I+DE H + D
Sbjct: 136 LLERYSIVILDEVHERTLSTD 156
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSN--P 1209
GD + LN++ + QWC +N++ ++++++A D+R L+ + + +
Sbjct: 504 GDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPS 563
Query: 1210 TETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFT 1269
++ I K + G+ ++A L GSYKT Q V + +S L E+ W++Y V +
Sbjct: 564 SDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHEKKTPWIMYSSAVES 622
Query: 1270 -TKEFMRQVTEIESKWLLEVAPHYYK 1294
T+ F++ +++IES WL YYK
Sbjct: 623 ETQIFVKNISKIESFWL----DKYYK 644
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 152/232 (65%), Gaps = 3/232 (1%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRF-RSDLKLLISSAT 59
+TDG L RE + DL YSV++IDEAHERT+ TD++ G +K +++ R DL++++ SAT
Sbjct: 179 LTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSAT 238
Query: 60 LDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVF 119
L A+KFSEFF++AP+ + GR+F V YY KAP D +DA + +QI+ + LGDIL F
Sbjct: 239 LQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCF 298
Query: 120 LTGQEEIETCNEILQDRVRRLG--SKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVL 177
L GQEEI+ I++ + + + + ++ P+Y+ LP Q+ +F P RKVV
Sbjct: 299 LPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVF 358
Query: 178 ATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
+TNIAETS+TI + +V+D G K + + G+ +L VPIS+ASA QR+G
Sbjct: 359 STNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSG 410
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 183/357 (51%), Gaps = 37/357 (10%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
+V+D G K + + G+ +L VPIS+ASA QR+GRAGR + GK FRLY Y +L
Sbjct: 374 FVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYV-KL 432
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ PEI R ++ + VLMLK G++DL+++ + + P E +V+ L++LY LGAL+ G
Sbjct: 433 PKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGK 492
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+TK G++MA PL P + +L+ + + C+ +++ I S LSV + ++ +
Sbjct: 493 ITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNER 552
Query: 977 RKNFFMLG---GDHLVLLNIYNQW-----ADADFSTQ---WCYENFIQHRSMKRARDVRE 1025
R + G GD ++L +++ + D S++ WC I R K VR+
Sbjct: 553 RLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRD 612
Query: 1026 QLIGLVQRV----------------EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSY 1069
QL +R+ + EL+S I K G+ + A SY
Sbjct: 613 QLRVYCKRLFSSISEEDEESKKIGEDGELIS------KILKCFLTGFIKNTAIGMPDRSY 666
Query: 1070 KTAKHNQTVMIHPNSSLF--EELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPH 1124
+T + + IHP+S LF + P ++Y E VFTTK + R V+ IE WL EV +
Sbjct: 667 RTVSTGEPISIHPSSMLFMNKSCP-GIMYTEYVFTTKGYARNVSRIELSWLQEVVTN 722
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 101/143 (70%), Gaps = 3/143 (2%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF-TKDKMKIGCTQPR 724
+++LP+Y K++++ + + V ++ GETGSGK+TQIPQ++ E + TK I TQPR
Sbjct: 78 RETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPR 137
Query: 725 RVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASY 784
RVAA++++ RVA+E G KLG +VGY++RF++ T+ RT +KY+TDG L RE + DL Y
Sbjct: 138 RVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREY 197
Query: 785 SVMIIDEAHPKVYVID--PGFCK 805
SV++IDEAH + + D GF K
Sbjct: 198 SVIVIDEAHERTVLTDLILGFLK 220
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 25/137 (18%)
Query: 1173 WCYENFIQHRSMKRARDVREQLIGLVQRV----------------EMELVSNPTETVNIR 1216
WC I R K VR+QL +R+ + EL+S I
Sbjct: 593 WCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISK------IL 646
Query: 1217 KAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF--EELPRWVLYHELVFTTKEFM 1274
K G+ + A SY+T + + IHP+S LF + P ++Y E VFTTK +
Sbjct: 647 KCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCP-GIMYTEYVFTTKGYA 705
Query: 1275 RQVTEIESKWLLEVAPH 1291
R V+ IE WL EV +
Sbjct: 706 RNVSRIELSWLQEVVTN 722
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 189/355 (53%), Gaps = 19/355 (5%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
+VID G K+ +N+R ESL PISK A R + GK F LY + HE+
Sbjct: 357 FVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHILSSSSEGKLFCLYPE-DFAHEM 415
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ +++ NL + VL LK + I L H DF++ P E+L+ ALE L L AL++ G+
Sbjct: 416 KPFLTAKVEECNLISMVLFLKRMDIAGLAHCDFINRPDPESLMQALEDLDYLAALDNDGN 475
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
L++ G M+EFPLDP + K +LA+ ++ CV+E++T+A+M++ P +
Sbjct: 476 LSEFGIIMSEFPLDPQLSKSILAACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKELDLIG 535
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIG 1029
+ FF GDH L+NIYN++ + +WC + + +++ AR +R +L+
Sbjct: 536 KGKFFHPEGDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHCLSFVALEMARAIRNELLD 595
Query: 1030 LVQRVEMELV----SNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS 1084
+++R+E+ L + NI+K++ +GYF IA+ + G+Y H Q +HP+S
Sbjct: 596 IMRRIELPLTGPAFGSDENVTNIKKSLLSGYFMQIARDVDGLGNYIMLTHKQVGQLHPDS 655
Query: 1085 SLFE--ELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELED 1133
++P WVL+HE + + +R V+EI +E P YY P E +D
Sbjct: 656 GFCNSAKVPEWVLFHEFSVSERSCIRIVSEISPNLFMEFVPPYYFSNLPPSETKD 710
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 124/239 (51%), Gaps = 12/239 (5%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L+SY V+IID+ +ER + TD+L +K I R +LK++I +
Sbjct: 164 TDEMLRREMMSNPLLSSYGVVIIDDVYERFVSTDVLLSFLKVIAVSRPELKVVIITCPSL 223
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
+ ++ +AP+ +Y T P DY + + + +IH T+ GDI+VFL
Sbjct: 224 SGTLVSYYGNAPLVEAENTHSVESVYTTSLPR-DYFHSALRLLFEIHHTKEKGDIVVFLA 282
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLP-------TPPNARK 174
+EEI+ E ++ + ++ EL+ + +Y + ++P + RK
Sbjct: 283 CEEEIKRAYEHIKQEALHMNPELGELMPIALYPH----QSISDYIPYEELDDNSKNPKRK 338
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITG 233
VVL T++ E+ + + NI +VID G K+ +N+R ESL PISK A R +++
Sbjct: 339 VVLTTSLGESLIWMKNIFFVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHILSS 397
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 86/138 (62%), Gaps = 4/138 (2%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE---AGFTKDKMKIGCTQ 722
+++LPI+ K D ++ + +Q++++ SGK++QIPQ+ E AG + + CTQ
Sbjct: 61 RETLPIWKIKYDFLEHLAHNQIVVVSAGPKSGKSSQIPQWCAEYCLAGHYQHG-AVVCTQ 119
Query: 723 PRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLA 782
+ A+ ++ RVA+EM V +G EVGY + FE+C + TI++Y TD L RE +S P L+
Sbjct: 120 AHKQTAVWLAMRVADEMDVNIGHEVGYIVPFENCCTSETILRYCTDEMLRREMMSNPLLS 179
Query: 783 SYSVMIIDEAHPKVYVID 800
SY V+IID+ + + D
Sbjct: 180 SYGVVIIDDVYERFVSTD 197
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 1152 GDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GDH L+NIYN++ + +WC + + +++ AR +R +L+ +++R+E+
Sbjct: 544 GDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHCLSFVALEMARAIRNELLDIMRRIELP 603
Query: 1205 LVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNSSLFE--EL 1257
L + NI+K++ +GYF IA+ + G+Y H Q +HP+S ++
Sbjct: 604 LTGPAFGSDENVTNIKKSLLSGYFMQIARDVDGLGNYIMLTHKQVGQLHPDSGFCNSAKV 663
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELED 1300
P WVL+HE + + +R V+EI +E P YY P E +D
Sbjct: 664 PEWVLFHEFSVSERSCIRIVSEISPNLFMEFVPPYYFSNLPPSETKD 710
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 198/352 (56%), Gaps = 25/352 (7%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YVID G K++ + RTGM L V +S++SA QRAGRAGR G+C+RLY+ + +
Sbjct: 591 YVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFD-SM 649
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL---NH 913
N PEI+R++LG A+L + ALGI+++ F+F+D P E + +A++ L LGA+ N
Sbjct: 650 NLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNG 709
Query: 914 HGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPK--DKII 971
+LT+ G + + L+P +GK++L +++ +E + +A++++ +IF R D +
Sbjct: 710 VLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKM 769
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIG 1029
AD + F GD LL++Y +WA D +WC+EN + +SM+R D ++L
Sbjct: 770 KADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEI 829
Query: 1030 LVQRVEMELVS------NPTETVN----IRKAITAGYFYHIAKLSKSG--SYKTAKHNQT 1077
++R E+ LVS NP E ++ I A ++A + Y+ A +Q
Sbjct: 830 CIER-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQ 888
Query: 1078 VMIHPNSSL--FEELPRWVLYHELVFTTKEFMRQVT--EIESKWLLEVAPHY 1125
V +HP+ SL F + P WV++ EL+ +++ VT + E+ ++L+ P +
Sbjct: 889 VQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPF 940
Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 134/239 (56%), Gaps = 21/239 (8%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTD L + ++ + L+ S +IIDEAHER+L+TD+L L++ ++ R DL+L+I SAT
Sbjct: 400 MTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATA 459
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPE---------ADYIDACVVSILQIHATQ 111
DA + S++ D + + GR FPV+I Y+ + A Y V ++IH T+
Sbjct: 460 DANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTE 519
Query: 112 PLGDILVFLTGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPP 170
G IL FLT Q E+E C + I LP++ L + Q +F P
Sbjct: 520 KEGTILAFLTSQAEVEWACERFVAPSA----------IALPLHGKLSFEEQFMVF-QNYP 568
Query: 171 NARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RKV+ ATNIAETSLTI + YVID G K++ + RTGM L V +S++SA QRAG
Sbjct: 569 GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAG 627
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 77/132 (58%), Gaps = 8/132 (6%)
Query: 668 SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRVA 727
LPIY +++ ++ + Q++++ GETGSGK+TQ+ Q+L ++G + I CTQPR++A
Sbjct: 302 GLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASE-SIVCTQPRKIA 360
Query: 728 AMSVSARVAEEMGVKLGC----EVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
AM+++ RV EE GC V F + + YMTD L + ++ + L+
Sbjct: 361 AMTLTDRVREESS---GCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSG 417
Query: 784 YSVMIIDEAHPK 795
S +IIDEAH +
Sbjct: 418 ISCVIIDEAHER 429
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 1152 GDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS-- 1207
GD LL++Y +WA D +WC+EN + +SM+R D ++L ++R E+ LVS
Sbjct: 783 GDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIER-ELTLVSPS 841
Query: 1208 ----NPTETVN----IRKAITAGYFYHIAKLSKSG--SYKTAKHNQTVMIHPNSSL--FE 1255
NP E ++ I A ++A + Y+ A +Q V +HP+ SL F
Sbjct: 842 YWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFG 901
Query: 1256 ELPRWVLYHELVFTTKEFMRQVT--EIESKWLLEVAPHY 1292
+ P WV++ EL+ +++ VT + E+ ++L+ P +
Sbjct: 902 QKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPF 940
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 189/346 (54%), Gaps = 19/346 (5%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YVIDPG + + ++ RT ++ L + PIS+ASANQR GR GRV+ G C RLY+ +
Sbjct: 366 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNSRP 425
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL----N 912
E T PEI R NL + +L + ALG++D+ F F+D P + ++ L LGA
Sbjct: 426 E-FTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQT 484
Query: 913 HHGD---LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDK 969
G+ LT++GR++A+ P+DP + KM+L++ + CV E++ I S LS+ RP++K
Sbjct: 485 KSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDP-RERPQEK 543
Query: 970 IIHADTARKNFFMLGGDHLVLLNIY-------NQWADADFSTQWCYENFIQHRSMKRARD 1022
+D + F D L LN++ + + F Q C ++F+ + ++ +D
Sbjct: 544 QQASDEKHRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQ-CQKDFLNYLRIREWQD 602
Query: 1023 VREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIA-KLSKSGSYKTAKHNQTVMIH 1081
+ Q+ V+ + + + S E I A+ +G HI K ++ Y A+ N I
Sbjct: 603 IYHQIRLTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGAR-NAHFAIF 661
Query: 1082 PNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
PNS LF++ P+WV+ ELV T+K + R V EIE +W+ +A H K
Sbjct: 662 PNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIK 707
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 162/287 (56%), Gaps = 23/287 (8%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIV-RFRSDLKLLISSAT 59
MTDG L E ++ L YS +IIDEAHER+L+ D + G +K ++ R R DLKL+I+SAT
Sbjct: 179 MTDGILLAEIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSAT 238
Query: 60 LDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDAC--VVSILQIHATQPLGDIL 117
+D ++FS+ F++AP+ + GR +PV++ Y E D D +++ + + GDIL
Sbjct: 239 IDVERFSKHFNNAPIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDIL 298
Query: 118 VFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVL 177
+F+ G+ EI E LQ + +K ILP+++ L Q KIF P+ N ++VL
Sbjct: 299 IFMNGEREIRDTAEALQKQ------NLKHTEILPLFARLSAQEQNKIFHPSGLN--RIVL 350
Query: 178 ATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG----VITG 233
ATN+AETSLT+ +I YVIDPG + + ++ RT ++ L + PIS+ASANQR G V G
Sbjct: 351 ATNVAETSLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 410
Query: 234 FNPLSDFRGCAHVLGEEVLRGCAHVLGEEVLRPEVSQPFRSFGYLGV 280
C + EE E+LR ++ LG+
Sbjct: 411 I--------CIRLYSEEDFNSRPEFTDPEILRTNLASVILQMTALGL 449
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 92/142 (64%), Gaps = 3/142 (2%)
Query: 667 KSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRV 726
+SLP+ K ++ + +HQV+++ GETGSGKTTQ+P+ E GF M IG TQPRR+
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGM-IGHTQPRRI 139
Query: 727 AAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSV 786
AA SV+AR+AEE+ +LG VGY +RF D S+ T IK MTDG L E ++ L YS
Sbjct: 140 AARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSC 199
Query: 787 MIIDEAHPKVYVID--PGFCKQ 806
+IIDEAH + D G+ KQ
Sbjct: 200 LIIDEAHERSLNNDFILGYLKQ 221
Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 15/176 (8%)
Query: 1127 KPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIY-------NQWADADFSTQWCYENFI 1179
+P+E + ++++K + A+ D L LN++ + + F Q C ++F+
Sbjct: 539 RPQEKQQASDEKH-----RRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQ-CQKDFL 592
Query: 1180 QHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIA-KLSKSGSYKT 1238
+ ++ +D+ Q+ V+ + + + S E I A+ +G HI K ++ Y
Sbjct: 593 NYLRIREWQDIYHQIRLTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLG 652
Query: 1239 AKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
A+ N I PNS LF++ P+WV+ ELV T+K + R V EIE +W+ +A H K
Sbjct: 653 AR-NAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIK 707
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 193/396 (48%), Gaps = 16/396 (4%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YVIDPG + + ++ RT ++ L + PIS+ASANQR GR GRV+ G C RLY+ +
Sbjct: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E T PEI R NL + +L + ALG+ D+ F F++ P + + L LGA+
Sbjct: 422 E-FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480
Query: 917 -----LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
LT LGR++++ P+DP + +M+L ++K+ CV E + I S LS+ RP DK
Sbjct: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP-RERPMDKQQ 539
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWAD------ADFSTQWCYENFIQHRSMKRARDVRE 1025
+D + F D L +N++N + ++ + C +++ + ++ +D+
Sbjct: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599
Query: 1026 QLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSS 1085
QL +V+ + + + S P E I A+ G HI T N I P S
Sbjct: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1145
LF++ P+WV+ ELV T++ + R I+ +W+ VA H K E + +
Sbjct: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719
Query: 1146 SRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQH 1181
+ + G +V N + C E FI+H
Sbjct: 720 EKVTVYGLPIVAARKVNY---SQIDPALCRELFIRH 752
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 145/235 (61%), Gaps = 15/235 (6%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E + L Y +IIDEAHER+L+ D L G +K+++ R DLK++I+SAT+
Sbjct: 173 MTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATI 232
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYY------TKAPEADYIDACVVSILQIHATQPLG 114
D ++FS F++AP+ + GR +PV++ Y E D + A ++ ++ + + G
Sbjct: 233 DPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHG 291
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DIL+F++G+ EI D + +L + E ILP+Y+ L Q ++F + R+
Sbjct: 292 DILIFMSGEREIRDT----ADALNKLNLRHTE--ILPLYARLSNSEQNRVF--QSHSGRR 343
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
+VLATN+AETSLT+ I YVIDPG + + ++ RT ++ L + PIS+ASANQR G
Sbjct: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Query: 668 SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPRRVA 727
+LP+ KQD+++A+RDHQV+I+ GETGSGKTTQ+P+ E G K IG TQPRR+A
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-RGIKGLIGHTQPRRLA 134
Query: 728 AMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVM 787
A +V+ R+AEE+ + G +GY +RF D S+ T++K MTDG L E + L Y +
Sbjct: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194
Query: 788 IIDEAHPKVYVID 800
IIDEAH + ID
Sbjct: 195 IIDEAHERSLNID 207
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 1153 DHLVLLNIYNQWAD------ADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1206
D L +N++N + ++ + C +++ + ++ +D+ QL +V+ + + +
Sbjct: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613
Query: 1207 SNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHEL 1266
S P E I A+ G HI T N I P S LF++ P+WV+ EL
Sbjct: 614 SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAEL 673
Query: 1267 VFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
V T++ + R I+ +W+ VA H K
Sbjct: 674 VETSRLWGRIAARIDPEWVEPVAQHLIK 701
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 177/356 (49%), Gaps = 18/356 (5%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
+VID G ++ +N R ES + PISK A R RA G C RLY+ + E
Sbjct: 338 HVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLELEA 397
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
P++ NL + VL+L I + FLD P E L+ ALE L L ALN G+
Sbjct: 398 PPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALNDDGE 457
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
L+ LG ++EFPL P + K LLAS ++ CV+E++T+A+ML+ F RP A
Sbjct: 458 LSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPPLSAGEA-AL 515
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
R+ GDH L+ +Y + + WC + S+ +AR +R +L+ L+QR+E+
Sbjct: 516 RRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIEL 575
Query: 1037 ELVSNPT-----ETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHP-----NSS 1085
L S P +++KA+ +GYF +A+ +G+Y H + P N
Sbjct: 576 PL-SQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSYRNRR 634
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNK 1137
+ P WVLYH + + V+EI+ + L+E+AP Y+ P E D N+
Sbjct: 635 TPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQ 690
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 121/231 (52%), Gaps = 9/231 (3%)
Query: 17 ASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS---DLKLLISSATLDAQKFSEFFDDAP 73
++SV+I+DEA ER++ +D+L GL++D R R+ D ++++ + KF F+ ++P
Sbjct: 159 GAWSVLILDEAQERSVASDLLQGLLRD-TRLRNLPGDPRVVVVTDPALEPKFQAFWGNSP 217
Query: 74 VFRIPGRRF--PVDIYYTKAPEADYIDACVVSILQI-HATQPLGDILVFLTGQEEIETCN 130
+ R+P P Y P D ++A ++L++ + GD+LV+L +EEI C
Sbjct: 218 IVRVPREPGGDPTLAYKDTVP-TDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCC 276
Query: 131 EILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDN 190
E L + L +LP++ +QT ++ T + RK+V+ +A+ S ++ +
Sbjct: 277 ESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLPS 335
Query: 191 IIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDFR 241
I +VID G ++ +N R ES + PISK A R GF P S R
Sbjct: 336 IQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLR 386
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 8/143 (5%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQ--VLIIEGETGSGKTTQIPQYLHE----AGFTKDKMK 717
E +++LPI+ + ++ + V+++ G+ GSGK+TQIPQ+ E GF ++
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQVT 96
Query: 718 IGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS 777
+ TQP +AAMS+++RVA+EM + LG E+GY+I EDCT T++++ D +E S
Sbjct: 97 V--TQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 778 EPDLASYSVMIIDEAHPKVYVID 800
++SV+I+DEA + D
Sbjct: 155 TRGPGAWSVLILDEAQERSVASD 177
Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT- 1210
GDH L+ +Y + + WC + S+ +AR +R +L+ L+QR+E+ L S P
Sbjct: 524 GDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIELPL-SQPAF 582
Query: 1211 ----ETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHP-----NSSLFEELPRW 1260
+++KA+ +GYF +A+ +G+Y H + P N + P W
Sbjct: 583 GSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPTW 642
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNK 1304
VLYH + + V+EI+ + L+E+AP Y+ P E D N+
Sbjct: 643 VLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQ 690
>sp|Q8IY37|DHX37_HUMAN Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37
PE=1 SV=1
Length = 1157
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 189/379 (49%), Gaps = 51/379 (13%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
YV+D G K+ ++ TG+ S V +S+ASA+QRAGRAGR G C+RLY++ + +
Sbjct: 634 YVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDF 692
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNH--- 913
E PEI R + + +L +KAL + +I+F F PP E L+ A E L ALGAL
Sbjct: 693 EQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQK 752
Query: 914 ------------HGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGA 961
+T LGR MA FP+ P KML S ++ C+ +TI + ++V
Sbjct: 753 AERVKQLQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVREL 812
Query: 962 I------------FYRPKDKIIHADTARKNFFMLG-----GDHLVLLNIYNQWADADFST 1004
R K K ++ + G GD +VLL A +
Sbjct: 813 FEELDRPAASDEELTRLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTP 872
Query: 1005 QWCYENFIQHRSMKRARDVREQLIGLVQRV--EMELVSNP-------TETVNIRKAITAG 1055
Q+C N +++++M R +R QL V V E EL +P ++ +R+ +TAG
Sbjct: 873 QFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDPKMQPPTESQVTYLRQIVTAG 932
Query: 1056 YFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEF 1106
H+A+ +S +YKT + V IHP+S LF+ELP +V+Y E+V TTK +
Sbjct: 933 LGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMY 992
Query: 1107 MRQVTEIESKWLLEVAPHY 1125
M+ V+ +E +W+ + P Y
Sbjct: 993 MKGVSSVEVQWIPALLPSY 1011
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 95/139 (68%), Gaps = 1/139 (0%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++E + LPI +Q +++AV +H ++I+ GETGSGKTTQ+PQ+L+EAGF+ + IG T
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 304
Query: 722 QPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+PRRVAA+++S RVA+EM + V Y IR+E +E T IK+MTDG L +E + L
Sbjct: 305 EPRRVAAVAMSQRVAKEMNLSQRV-VSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 363
Query: 782 ASYSVMIIDEAHPKVYVID 800
Y V+IIDEAH + D
Sbjct: 364 LRYKVVIIDEAHERSVYTD 382
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 9/135 (6%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L Y V+IIDEAHER+++TDIL GL+ IV R+ LKLLI
Sbjct: 348 MTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIM 407
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F++ F PV ++ R+FPV +++ K P DY C + +IH
Sbjct: 408 SATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRML 467
Query: 112 PLGDILVFLTGQEEI 126
P G ILVFLTGQ E+
Sbjct: 468 PAGGILVFLTGQAEV 482
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 19/174 (10%)
Query: 1138 KMPKTLGKSRAELG-GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIG 1196
+M +T A L GD +VLL A + Q+C N +++++M R +R QL
Sbjct: 838 QMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTT 897
Query: 1197 LVQRV--EMELVSNP-------TETVNIRKAITAGYFYHIAKLSKS---------GSYKT 1238
V V E EL +P ++ +R+ +TAG H+A+ +S +YKT
Sbjct: 898 AVNAVCPEAELFVDPKMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKT 957
Query: 1239 AKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+ V IHP+S LF+ELP +V+Y E+V TTK +M+ V+ +E +W+ + P Y
Sbjct: 958 PLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS L + Q ++F P P R V+ATN+AETSLTI I YV+D G K+ ++
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 207 SRTGMESLTVVPISKASANQRAG 229
TG+ S V +S+ASA+QRAG
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAG 670
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB1A10.06c PE=3 SV=1
Length = 1183
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 152/287 (52%), Gaps = 58/287 (20%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD---------- 50
MTDG L RE S+ L +YS +I+DEAHER+++TDIL GL+ IVR R +
Sbjct: 498 MTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKP 557
Query: 51 LKLLISSATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQ 106
LKL+I SATL FSE F P+ +I R++PV I++ + + DY+ +
Sbjct: 558 LKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCL 617
Query: 107 IHATQPLGDILVFLTGQEEIETCNEILQDR----VRRLGSKIKELI-------------- 148
IH P G ILVFLTGQ+E+E ++L+ R R L S+ + ++
Sbjct: 618 IHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQS 677
Query: 149 --------------------------ILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIA 182
+LP+YS L T+ Q K+F +P R ++ATN+A
Sbjct: 678 ETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVA 737
Query: 183 ETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
ETS+TI NI YV+D G K+ +N +T ++ V ISKA+A+QRAG
Sbjct: 738 ETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAG 784
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 197/415 (47%), Gaps = 69/415 (16%)
Query: 772 HREFLSEPDLASYSVMIIDEAHPKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 830
HR + ++A S+ I P + YV+D G K+ +N +T ++ V ISKA+A+Q
Sbjct: 727 HRMCIVATNVAETSITI-----PNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQ 781
Query: 831 RAGRAGRVAAGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFL 890
RAGRAGR G C+RLY++ + +++PEI R + + VL +K + I+++ +F F
Sbjct: 782 RAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFP 841
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
P L +L+ L LGA++ G LTKLG +M+ FPL P KML+ +++ C+ ++
Sbjct: 842 TSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVI 901
Query: 951 TIASMLSVN------GAIFYRPKDK--------IIHAD----------------TARKNF 980
+ S LS+N ++ Y DK +I D A F
Sbjct: 902 ALVSALSINQLFVSKQSLLYDAHDKNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRF 961
Query: 981 FMLGGD--HLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQ----RV 1034
+ D L LL+ + A ++C EN+++ ++++ ++R+Q+IGL++ RV
Sbjct: 962 QAIDPDAPALSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRV 1021
Query: 1035 EME---LVSNPTETVNI---RKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE 1088
E E L P +V I R+ I + Y +A Y K + S + +
Sbjct: 1022 EKEFFKLQLKPPTSVQIKALRQFIASAYIDQVA------LYDKEKRGYVTLFPSGSEVVQ 1075
Query: 1089 ELP--------RWVLYHEL--VFTTKEFMRQVTEIESKWLLEVAPH-----YYKP 1128
+P +V+Y L + + +M +TEI + L +A + Y KP
Sbjct: 1076 FVPDRTYNIDSEYVVYLSLHESRSGRVYMSPLTEISPEHLARLAKNTTLLSYSKP 1130
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK---- 717
I+E++ +LPI +Q +++ + + V+II G TGSGKTTQ+PQ+L EAGF+ + +
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 718 IGCTQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS 777
I TQPRRVAA+S++ RV+EE+ +V Y IRF+ + T IK+MTDG L RE S
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 778 EPDLASYSVMIIDEAH 793
+ L +YS +I+DEAH
Sbjct: 510 DFLLTAYSAVIVDEAH 525
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 1155 LVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQ----RVEME---LVS 1207
L LL+ + A ++C EN+++ ++++ ++R+Q+IGL++ RVE E L
Sbjct: 971 LSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQL 1030
Query: 1208 NPTETVNI---RKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP------ 1258
P +V I R+ I + Y +A Y K + S + + +P
Sbjct: 1031 KPPTSVQIKALRQFIASAYIDQVA------LYDKEKRGYVTLFPSGSEVVQFVPDRTYNI 1084
Query: 1259 --RWVLYHEL--VFTTKEFMRQVTEIESKWLLEVAPH-----YYKP 1295
+V+Y L + + +M +TEI + L +A + Y KP
Sbjct: 1085 DSEYVVYLSLHESRSGRVYMSPLTEISPEHLARLAKNTTLLSYSKP 1130
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 141/252 (55%), Gaps = 15/252 (5%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T G L R+ EP L Y V+I+DE HER LH D L G+++ ++ R DLK+++ SAT+
Sbjct: 255 LTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATI 314
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYY------TKAPEADYIDA-----CVVSILQIHA 109
+ FS +F +APV ++PGR FP+ + Y +++ +D + SI +
Sbjct: 315 NISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYP 374
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
+ GD+LVFL+G EI E Q S + ++LP++S L Q K+F P
Sbjct: 375 PEERGDLLVFLSGMAEISAVLEAAQT----YASHTQRWVVLPLHSALSVADQDKVFDVAP 430
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
P RK +L+TNIAETS+TID I +V+D G K+ +++ + ++ L IS+ASA QR G
Sbjct: 431 PGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 490
Query: 230 VITGFNPLSDFR 241
P FR
Sbjct: 491 RAGRTGPGVCFR 502
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 123/241 (51%), Gaps = 7/241 (2%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAAGKCFRLYTAWAYKHEL 856
+V+D G K+ +++ + ++ L IS+ASA QR GRAGR G CFRLY Y
Sbjct: 454 FVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYD-AF 512
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEI+R+ L + VL +K++ + D F F++PPP +L A+ L GAL+
Sbjct: 513 APYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEA 572
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +G +A+ P+D ++GKML+ + VE ++TIA+ LSV F R A
Sbjct: 573 LTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSP-FTRSAQSSPECAAA 631
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLV 1031
R+ GD L N++N W S +WC I+ + ++R Q L+
Sbjct: 632 RRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELL 691
Query: 1032 Q 1032
+
Sbjct: 692 E 692
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGC 720
++ + +LPI + ++ +++HQV+++ G+TG GK+TQ+PQYL AGF+ + C
Sbjct: 154 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 209
Query: 721 TQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQPRR+A +S++ RV E + G +VGY IRFE S T I ++T G L R+ EP
Sbjct: 210 TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPS 269
Query: 781 LASYSVMIIDEAH 793
L Y V+I+DE H
Sbjct: 270 LPQYEVLIVDEVH 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 489,157,762
Number of Sequences: 539616
Number of extensions: 21194399
Number of successful extensions: 81757
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 1405
Number of HSP's that attempted gapping in prelim test: 73982
Number of HSP's gapped (non-prelim): 5656
length of query: 1320
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1190
effective length of database: 121,419,379
effective search space: 144489061010
effective search space used: 144489061010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)