Your job contains 1 sequence.
>psy1907
MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL
DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL
TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN
IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF
RGCAHVLGEEVLRGCAHVLGEEVLRPEVSQPFRSFGYLGVMQDCRYIGTYLVGFIWHWKN
HYIQDQTLVTFMLTHLPTTYIKRKSSEYKVGNGEDSFCVSPLYNLTIQSSSFQSITIQCF
ASLQLHHPVIQLFTILPSSSTSSRLFTTLPSSLAAVPHHIQRQSPAQSYHRMTPGCTDRR
TQSPCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK
RAYEEAAKRLKLEAESRDKIIPKLRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQEL
TERERRDREHKRKLLELAKEHDKARELEKVQRYYMPKGTKGPEKYEEVDEKEKVPHYEQR
KWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKL
NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGC
TQPRRVAAMSVSARVAEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD
LASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGRAGRVAA
GKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL
ALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNG
AIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRA
RDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMI
HPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMP
KTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR
VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW
VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGEH
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1907
(1320 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 1583 2.9e-273 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 1422 2.7e-246 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 1386 9.6e-242 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 1383 2.6e-241 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 1380 4.2e-241 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 1380 4.2e-241 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 1379 5.3e-241 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 1380 6.8e-241 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 1335 9.4e-233 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 1335 9.4e-233 2
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 1380 1.1e-231 2
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 1380 5.9e-231 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 1236 4.2e-219 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 1189 5.8e-211 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 1181 4.7e-207 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1054 4.2e-195 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1077 1.1e-192 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 983 1.8e-185 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 933 1.7e-174 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 933 1.7e-174 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 933 1.7e-174 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 933 1.7e-174 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 933 1.7e-174 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 933 1.7e-174 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 933 1.7e-174 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 932 2.2e-174 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 927 7.5e-174 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 944 3.2e-173 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 918 1.3e-171 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 939 1.6e-171 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 881 8.2e-165 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 881 8.2e-165 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 845 3.4e-155 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 796 9.1e-155 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 874 1.4e-154 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 874 1.4e-154 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 809 1.7e-151 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 833 9.6e-150 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 818 4.1e-147 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 777 2.7e-143 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 756 2.9e-143 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 774 8.6e-142 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 777 9.9e-139 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 777 1.0e-138 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 791 1.3e-138 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 791 1.3e-138 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 775 1.4e-138 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 777 1.7e-138 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 769 3.6e-138 2
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 758 4.3e-138 2
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 744 7.2e-137 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 751 4.6e-136 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 739 1.5e-135 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 733 1.8e-134 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 737 3.9e-132 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 728 1.4e-131 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 724 1.1e-129 2
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 697 2.5e-129 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 722 6.4e-129 2
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 728 9.8e-129 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 716 1.8e-128 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 720 2.2e-128 2
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 720 2.2e-128 2
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 743 2.8e-124 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 868 4.0e-124 3
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 706 5.3e-124 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 867 7.0e-124 3
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 840 4.2e-121 2
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 678 4.6e-120 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 643 4.8e-120 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 642 6.2e-120 2
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 683 9.1e-120 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 680 1.7e-118 2
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 724 2.6e-118 3
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 724 2.6e-118 3
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 835 4.3e-117 3
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 835 4.8e-116 3
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 835 4.8e-116 3
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 835 4.8e-116 3
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 835 4.8e-116 3
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 835 1.3e-115 3
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 835 1.3e-115 3
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 613 3.4e-115 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 835 4.1e-115 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 822 7.3e-115 3
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 813 5.8e-113 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 613 7.2e-113 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 602 3.3e-112 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 585 3.7e-112 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 824 6.5e-112 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 824 6.5e-112 2
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 629 7.4e-112 2
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 577 7.2e-111 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 598 8.0e-111 2
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 598 8.0e-111 2
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 606 2.0e-110 2
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 589 2.2e-110 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 782 4.6e-110 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 792 1.3e-107 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 783 1.6e-107 2
WARNING: Descriptions of 215 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 1583 (562.3 bits), Expect = 2.9e-273, Sum P(2) = 2.9e-273
Identities = 299/355 (84%), Positives = 321/355 (90%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YVIDPGF KQNNFNSRTGMESL VVPISKASANQ KCFRLYTAWAYKHE
Sbjct: 540 IYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHE 599
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG
Sbjct: 600 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 659
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LTKLGRRMAEFP+DPMMGKMLLASEKYKC EE+VTIA+MLSVN AIFYRPKDKIIHADT
Sbjct: 660 ELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADT 719
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
ARKNF + GDHL LL +YNQWA+ D+STQWCYENFIQ+RSMKRARDVREQL+GL+QRVE
Sbjct: 720 ARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVE 779
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+++VS ETVN+RKA TAGYFYH+A+LSK G YKT KHNQTVMIHPNSSLFEELPRWVL
Sbjct: 780 IDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVL 839
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL 1150
YHELVFT+KE+MRQV EIESKWLLEVAPHYYK +ELEDSTNKKMPK G RAE+
Sbjct: 840 YHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAG--RAEM 892
Score = 1068 (381.0 bits), Expect = 2.9e-273, Sum P(2) = 2.9e-273
Identities = 204/229 (89%), Positives = 219/229 (95%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDI RFR +LKLLISSATL
Sbjct: 349 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATL 408
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS FFDDAP+FRIPGRR+PVDI+YTKAPEADYIDAC VS+LQIHATQPLGDILVFL
Sbjct: 409 DAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFL 468
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQ+EIETC E+L DRV+RLGSKI+ELI++PVY+NLP+DMQ KIF PTPPNARKV+LATN
Sbjct: 469 TGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATN 528
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTIDNIIYVIDPGF KQNNFNSRTGMESL VVPISKASANQRAG
Sbjct: 529 IAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAG 577
Score = 1055 (376.4 bits), Expect = 6.8e-272, Sum P(2) = 6.8e-272
Identities = 212/355 (59%), Positives = 255/355 (71%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERDEF+ RLK RD + T+NV S +R RDKI+P LR++SRR
Sbjct: 29 DLQERDEFASRLKKRDDDRTRNVVDSTGGRRAIEEATKRLKLEHEDRDKIVPHLRLQSRR 88
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKV 570
+YLEKRK+DKVAELEADILDDEYLF E LT AKEH+KARELE++
Sbjct: 89 QYLEKRKDDKVAELEADILDDEYLFDESVLTKREKEEREYKKQLLNIAKEHEKARELERI 148
Query: 571 QRYYMPKGTK-GPXXXXXXXXXXXX-PHYEQRKWEDEQMSSAIFRVGAKDREHQEQYELL 628
QRY MP+ K G P+ EQ+KWE EQ++SA F GAKD + +E+YELL
Sbjct: 149 QRYNMPQDLKKGERSEYVEVDEFEKQPNSEQKKWEAEQLASARFHFGAKDAKAEEEYELL 208
Query: 629 LDNQIDFIQALSLPGNRDKG---EEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDH 685
LD+QIDFIQAL+L G+R+K + E+TEK++K+L ++ET++SLP+YPFK+DLI AV++H
Sbjct: 209 LDDQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEH 268
Query: 686 QVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGC 745
QVLIIEGETGSGKTTQ+PQYL EAGFTKDK IGCTQP EEMGVKLG
Sbjct: 269 QVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGN 328
Query: 746 EVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
EVGY+IRFEDCTS+RTI+KYMTDGTLHREFLSEPDLASYSVMIIDEAH + D
Sbjct: 329 EVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTD 383
Score = 733 (263.1 bits), Expect = 2.3e-183, Sum P(2) = 2.3e-183
Identities = 136/178 (76%), Positives = 155/178 (87%)
Query: 1142 TLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1201
T K+ + GDHL LL +YNQWA+ D+STQWCYENFIQ+RSMKRARDVREQL+GL+QRV
Sbjct: 719 TARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRV 778
Query: 1202 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWV 1261
E+++VS ETVN+RKA TAGYFYH+A+LSK G YKT KHNQTVMIHPNSSLFEELPRWV
Sbjct: 779 EIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWV 838
Query: 1262 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGE 1319
LYHELVFT+KE+MRQV EIESKWLLEVAPHYYK +ELEDSTNKKMPK G RAE+ +
Sbjct: 839 LYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAG--RAEMAQ 894
Score = 64 (27.6 bits), Expect = 1.7e-77, Sum P(3) = 1.7e-77
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 1095 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKS-RAE 1149
L+ E V T +E ++ E + K LL +A + K RELE MP+ L K R+E
Sbjct: 112 LFDESVLTKRE--KEEREYK-KQLLNIAKEHEKARELERIQRYNMPQDLKKGERSE 164
Score = 38 (18.4 bits), Expect = 2.5e-164, Sum P(2) = 2.5e-164
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 445 LTDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
+ DS R+ +E ++RLK ++ K V R R
Sbjct: 51 VVDSTGGRRAIEEATKRLKLEHEDRDKIVPHLRLQSR 87
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 1422 (505.6 bits), Expect = 2.7e-246, Sum P(2) = 2.7e-246
Identities = 259/356 (72%), Positives = 306/356 (85%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YVIDPGFCKQ ++N++TGMESL V P S+ASANQ KCFRLYTAWA+KHE
Sbjct: 700 IYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHE 759
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+E+ TVPEIQR NLGN VL+LK+LGINDLIHFDF+DPPPHETLVLALEQLYALGALNH G
Sbjct: 760 MEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLG 819
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LTKLGRRMAE P+DPM+ KM+LASE+YKC EE++TIA+MLSVN +IFYRPKDK++HAD
Sbjct: 820 ELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADN 879
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NF + GGDHLVLLN+Y QW ++ +STQWC+ENFIQ RSMKRARDVR+QL GL+ R+E
Sbjct: 880 ARMNFVVPGGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIE 939
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+EL S+ +++ IRKA+TAGYFYH A+LSK G YKT KH QTV +HPNSSLFEE PRW++
Sbjct: 940 VELCSSNGDSMPIRKAVTAGYFYHTARLSKGG-YKTVKHQQTVYVHPNSSLFEEQPRWMI 998
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELVFTTKEFMRQV EIES WLLEVAPHYYK +ELEDS++KKMP+ GK+R ELG
Sbjct: 999 YHELVFTTKEFMRQVIEIESGWLLEVAPHYYKNKELEDSSSKKMPRKQGKAREELG 1054
Score = 974 (347.9 bits), Expect = 2.7e-246, Sum P(2) = 2.7e-246
Identities = 183/229 (79%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFL+EPDLASYSV+IIDEAHERTLHTDILFGL+KDI RFR DLK+L++SATL
Sbjct: 509 MTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATL 568
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D ++FS FFDDAPVFRIPGRRFPVDIYYTKAPEADY++ACVVS+LQIH TQ GD+LVFL
Sbjct: 569 DTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFL 628
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE C E+LQ+R RRLGSKI EL++LP+Y+NLP+DMQ KIF PTPP ARKVV+ATN
Sbjct: 629 TGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATN 688
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID IIYVIDPGFCKQ ++N++TGMESL V P S+ASANQRAG
Sbjct: 689 IAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAG 737
Score = 670 (240.9 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 131/232 (56%), Positives = 172/232 (74%)
Query: 1089 ELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPH-YYKPRE-LEDSTNKKMPKTLGKS 1146
ELP + +++ ++++ + +L V +Y+P++ + + N +M +
Sbjct: 830 ELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVP-- 887
Query: 1147 RAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1206
GGDHLVLLN+Y QW ++ +STQWC+ENFIQ RSMKRARDVR+QL GL+ R+E+EL
Sbjct: 888 ----GGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELC 943
Query: 1207 SNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHEL 1266
S+ +++ IRKA+TAGYFYH A+LSK G YKT KH QTV +HPNSSLFEE PRW++YHEL
Sbjct: 944 SSNGDSMPIRKAVTAGYFYHTARLSKGG-YKTVKHQQTVYVHPNSSLFEEQPRWMIYHEL 1002
Query: 1267 VFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
VFTTKEFMRQV EIES WLLEVAPHYYK +ELEDS++KKMP+ GK+R ELG
Sbjct: 1003 VFTTKEFMRQVIEIESGWLLEVAPHYYKNKELEDSSSKKMPRKQGKAREELG 1054
Score = 592 (213.5 bits), Expect = 6.9e-206, Sum P(2) = 6.9e-206
Identities = 144/369 (39%), Positives = 207/369 (56%)
Query: 452 RKERDEFSERLKNRDKNN----TKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIE 507
+K++D+ L+ DK K + + +DKR SR + + K R +
Sbjct: 189 QKDKDKTRNILERNDKKAYEEAQKRIKMAEEDKRKMLPELRKQ-----SRRQYLSK-REQ 242
Query: 508 SRRKYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKAREL 567
+ + LE +D+ L D ++L AKE +
Sbjct: 243 EKLEDLEAEIKDEEYLFSTQNLTDR---ERKDLEYKRTIRDMAKEYKKAGAKEQE----- 294
Query: 568 EKVQRYYMP--KGTKGPXXXXXXXXXXXXPHY---EQRKWEDEQMSSAIFRVGAKD---- 618
E+ RYYMP K K P EQ +WE+ ++++A + GA+
Sbjct: 295 ERKNRYYMPEEKRNKSIPQKDMDLEFEETPREGGGEQGRWEEARVATATLQFGARQERER 354
Query: 619 --REHQEQYELLLDNQ--IDFIQ-ALSLPG--NRDKGEEEMTEKQKKKLNIEETKKSLPI 671
+E QE+Y+L+L+ + I F+ A+++ G + + E E+++ +K+K +I+E ++SLPI
Sbjct: 355 RIKEEQERYQLILEEEEMITFVSTAITMKGTLSEKESEPELSQAEKQKQSIQEVRRSLPI 414
Query: 672 YPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXX 731
+P+++DL+ A+ DHQ+L+IEGETGSGKTTQIPQYL E G+TK MKIGCTQP
Sbjct: 415 FPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGMKIGCTQPRRVAAMSV 474
Query: 732 XXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDE 791
+EM VKLG EVGY+IRFEDCTSERTI+KYMTDG L REFL+EPDLASYSV+IIDE
Sbjct: 475 AARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDLASYSVIIIDE 534
Query: 792 AHPKVYVID 800
AH + D
Sbjct: 535 AHERTLHTD 543
Score = 296 (109.3 bits), Expect = 1.4e-174, Sum P(2) = 1.4e-174
Identities = 75/226 (33%), Positives = 119/226 (52%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD F+ER+K +DK+ T+N+ R DK+ + K++P+LR +SRR
Sbjct: 176 DLEERDAFAERVKQKDKDKTRNIL-ERNDKKAYEEAQKRIKMAEEDKRKMLPELRKQSRR 234
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKA---REL 567
+YL KR+++K+ +LEA+I D+EYLFS Q LT AKE+ KA +
Sbjct: 235 QYLSKREQEKLEDLEAEIKDEEYLFSTQNLTDRERKDLEYKRTIRDMAKEYKKAGAKEQE 294
Query: 568 EKVQRYYMP--KGTKGPXXXXXXXXXXXXPHY---EQRKWEDEQMSSAIFRVGAKD---- 618
E+ RYYMP K K P EQ +WE+ ++++A + GA+
Sbjct: 295 ERKNRYYMPEEKRNKSIPQKDMDLEFEETPREGGGEQGRWEEARVATATLQFGARQERER 354
Query: 619 --REHQEQYELLLDNQ--IDFIQ-ALSLPGNRDKGEEEMTEKQKKK 659
+E QE+Y+L+L+ + I F+ A+++ G + E E Q +K
Sbjct: 355 RIKEEQERYQLILEEEEMITFVSTAITMKGTLSEKESEPELSQAEK 400
Score = 40 (19.1 bits), Expect = 1.6e-147, Sum P(2) = 1.6e-147
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 450 DDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
+D+K +E +R+K +++ K + R+ R
Sbjct: 202 NDKKAYEEAQKRIKMAEEDKRKMLPELRKQSR 233
Score = 37 (18.1 bits), Expect = 3.3e-147, Sum P(2) = 3.3e-147
Identities = 17/83 (20%), Positives = 34/83 (40%)
Query: 445 LTDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKL 504
L DS+ D + E + K+++++ K RQ KR K PK
Sbjct: 97 LEDSESDGEAAREGGKEKKSKERDKGKKRKHLRQ-KRDESPSSSEEDKKKSITFKDEPKK 155
Query: 505 --RIESRRKYLEKRKEDKVAELE 525
+ + + E+ + +++ +LE
Sbjct: 156 AGKEDEEEEEWERGERERLQDLE 178
Score = 37 (18.1 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 595 PHYEQRKWEDEQMSSAIFRVGAKDRE 620
PHY + K ++ S + R K RE
Sbjct: 1026 PHYYKNKELEDSSSKKMPRKQGKARE 1051
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 1386 (493.0 bits), Expect = 9.6e-242, Sum P(2) = 9.6e-242
Identities = 254/356 (71%), Positives = 301/356 (84%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQ KCFRLYTAWAY+HE
Sbjct: 688 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 747
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 748 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 807
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 808 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 867
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 868 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 927
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+L
Sbjct: 928 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLL 986
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED +KKMPK +GK+R ELG
Sbjct: 987 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHSKKMPKKIGKTREELG 1042
Score = 967 (345.5 bits), Expect = 9.6e-242, Sum P(2) = 9.6e-242
Identities = 181/229 (79%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SATL
Sbjct: 497 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATL 556
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 557 DTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 616
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 617 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 676
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 677 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 725
Score = 793 (284.2 bits), Expect = 2.4e-223, Sum P(2) = 2.4e-223
Identities = 162/359 (45%), Positives = 232/359 (64%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+ R ++P+LR +SRR
Sbjct: 175 DLEERDAFAERVRQRDKDRTRNVL-ERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 233
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ A+E+ A E EK+
Sbjct: 234 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKL 293
Query: 571 Q---RYYMPKGTKG-PXXXXXXXXXXX-XPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MP+ T+G P P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 294 EATNRYHMPEETRGQPSRAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 353
Query: 625 YELLLDNQ--IDFIQALSLPGNRD-KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDA 681
Y+L+L+ + I+F++A L GN + G ++ Q+K+ +++ ++SLP++PF+++L+ A
Sbjct: 354 YQLVLEEEETIEFVRATQLQGNEEPSGPSPPSQAQQKE-SVQAVRRSLPVFPFREELLAA 412
Query: 682 VRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGV 741
+ DHQVLIIEGETGSGKTTQIPQYL E G+TK MKI CTQP EMGV
Sbjct: 413 IADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGV 472
Query: 742 KLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
KLG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 473 KLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTD 531
Score = 652 (234.6 bits), Expect = 4.0e-164, Sum P(2) = 4.0e-164
Identities = 120/168 (71%), Positives = 142/168 (84%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 876 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 935
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+LYHELV TT
Sbjct: 936 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTT 994
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED +KKMPK +GK+R ELG
Sbjct: 995 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHSKKMPKKIGKTREELG 1042
Score = 45 (20.9 bits), Expect = 3.0e-144, Sum P(2) = 3.0e-144
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 603 EDEQMSS--AIFRVGA---KDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQK 657
ED + SS + R G+ K R ++ + + + +S G R G + TEK +
Sbjct: 101 EDSEESSEETVGRTGSSLQKKRRKRKHLRKKCQEEEEEEEEISEKGRRKTGGSKQTEKPE 160
Query: 658 KKLNIEETKK 667
+ E T++
Sbjct: 161 SEDEWERTER 170
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 1383 (491.9 bits), Expect = 2.6e-241, Sum P(2) = 2.6e-241
Identities = 254/356 (71%), Positives = 300/356 (84%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQ KCFRLYTAWAY+HE
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 930
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+L
Sbjct: 931 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLL 989
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 990 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 1045
Score = 966 (345.1 bits), Expect = 2.6e-241, Sum P(2) = 2.6e-241
Identities = 180/229 (78%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SATL
Sbjct: 500 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATL 559
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAP+FRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 560 DTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 619
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 620 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 679
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 680 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 728
Score = 783 (280.7 bits), Expect = 5.8e-222, Sum P(2) = 5.8e-222
Identities = 159/358 (44%), Positives = 229/358 (63%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+ R ++P+LR +SRR
Sbjct: 178 DLEERDAFAERVRQRDKDRTRNVL-ERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 236
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ A+E+ A E EK+
Sbjct: 237 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELRYKRRVRDLAREYRAAGEQEKL 296
Query: 571 Q---RYYMPKGTKG-PXXXXXXXXXXX-XPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MP+ T+G P P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 297 EATNRYHMPEETRGQPARTVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 356
Query: 625 YELLLDNQ--IDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAV 682
Y+L+L+ + I+F++A L G+ + + ++K +I+ ++SLP++PF+++L+ A+
Sbjct: 357 YQLVLEEEETIEFVRATQLQGDEEPSAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAI 416
Query: 683 RDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVK 742
+HQVLIIEGETGSGKTTQIPQYL E G+TK MKI CTQP EMGVK
Sbjct: 417 ANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVK 476
Query: 743 LGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
LG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 477 LGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTD 534
Score = 649 (233.5 bits), Expect = 1.1e-163, Sum P(2) = 1.1e-163
Identities = 120/168 (71%), Positives = 141/168 (83%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 879 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 938
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+LYHELV TT
Sbjct: 939 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTT 997
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 998 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 1045
Score = 42 (19.8 bits), Expect = 1.3e-143, Sum P(2) = 1.3e-143
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 646 DKGEEEMTEKQKKKLNI--EETKK 667
D+ EE+++EK K+K E+T+K
Sbjct: 138 DEEEEQVSEKGKRKTGEKKEQTEK 161
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 1380 (490.8 bits), Expect = 4.2e-241, Sum P(2) = 4.2e-241
Identities = 254/356 (71%), Positives = 299/356 (83%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQ KCFRLYTAWAY+HE
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 930
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+L
Sbjct: 931 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLL 989
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK GK+R ELG
Sbjct: 990 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTREELG 1045
Score = 967 (345.5 bits), Expect = 4.2e-241, Sum P(2) = 4.2e-241
Identities = 181/229 (79%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SATL
Sbjct: 500 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATL 559
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 560 DTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 619
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 620 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 679
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 680 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 728
Score = 779 (279.3 bits), Expect = 3.2e-221, Sum P(2) = 3.2e-221
Identities = 158/358 (44%), Positives = 229/358 (63%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+ R ++P+LR +SRR
Sbjct: 178 DLEERDAFAERVRQRDKDRTRNVL-ERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 236
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ A+E+ A E EK+
Sbjct: 237 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKL 296
Query: 571 Q---RYYMPKGTKG-PXXXXXXXXXXX-XPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MP+ T+G P P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 297 EATNRYHMPEETRGQPTRAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 356
Query: 625 YELLLDNQ--IDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAV 682
Y+L+L+ + I+F++A L G+ + + ++K +I+ ++SLP++PF+++L+ AV
Sbjct: 357 YQLVLEEEETIEFVRATQLQGDEEPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAV 416
Query: 683 RDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVK 742
+HQ+LIIEGETGSGKTTQIPQYL E G+T+ MKI CTQP EMGVK
Sbjct: 417 ANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVK 476
Query: 743 LGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
LG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 477 LGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTD 534
Score = 646 (232.5 bits), Expect = 1.7e-163, Sum P(2) = 1.7e-163
Identities = 120/168 (71%), Positives = 140/168 (83%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 879 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 938
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+LYHELV TT
Sbjct: 939 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTT 997
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK GK+R ELG
Sbjct: 998 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTREELG 1045
Score = 41 (19.5 bits), Expect = 3.4e-143, Sum P(2) = 3.4e-143
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 600 RKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKK 659
RK E+ + A R E Y LL D++ +A+ G+ + + + + +KK
Sbjct: 72 RKAVAEKPARAAEREARALLEKNRSYRLLEDSEESSEEAVGRAGSSLQKKRKKRKHLRKK 131
Query: 660 LNIEETKKSLPIYPFK 675
EE ++ P K
Sbjct: 132 RQEEEEEEEEEEVPEK 147
Score = 39 (18.8 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 558 AKEHDKARELEKVQRYYMPKGT 579
A + KA+ELE MPK T
Sbjct: 1016 APHYYKAKELEDPHAKKMPKKT 1037
Score = 37 (18.1 bits), Expect = 8.9e-143, Sum P(2) = 8.9e-143
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 509 RRKYLEKRKEDKVAELEAD 527
+RK+L K+++++ E E +
Sbjct: 124 KRKHLRKKRQEEEEEEEEE 142
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 1380 (490.8 bits), Expect = 4.2e-241, Sum P(2) = 4.2e-241
Identities = 254/356 (71%), Positives = 299/356 (83%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQ KCFRLYTAWAY+HE
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 930
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+L
Sbjct: 931 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLL 989
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK GK+R ELG
Sbjct: 990 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTREELG 1045
Score = 967 (345.5 bits), Expect = 4.2e-241, Sum P(2) = 4.2e-241
Identities = 181/229 (79%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SATL
Sbjct: 500 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATL 559
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 560 DTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 619
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 620 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 679
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 680 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 728
Score = 779 (279.3 bits), Expect = 3.2e-221, Sum P(2) = 3.2e-221
Identities = 158/358 (44%), Positives = 229/358 (63%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+ R ++P+LR +SRR
Sbjct: 178 DLEERDAFAERVRQRDKDRTRNVL-ERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 236
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ A+E+ A E EK+
Sbjct: 237 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKL 296
Query: 571 Q---RYYMPKGTKG-PXXXXXXXXXXX-XPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MP+ T+G P P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 297 EATNRYHMPEETRGQPTRAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 356
Query: 625 YELLLDNQ--IDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAV 682
Y+L+L+ + I+F++A L G+ + + ++K +I+ ++SLP++PF+++L+ AV
Sbjct: 357 YQLVLEEEETIEFVRATQLQGDEEPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAV 416
Query: 683 RDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVK 742
+HQ+LIIEGETGSGKTTQIPQYL E G+T+ MKI CTQP EMGVK
Sbjct: 417 ANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVK 476
Query: 743 LGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
LG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 477 LGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTD 534
Score = 646 (232.5 bits), Expect = 1.7e-163, Sum P(2) = 1.7e-163
Identities = 120/168 (71%), Positives = 140/168 (83%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 879 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 938
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFEE PRW+LYHELV TT
Sbjct: 939 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTT 997
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK GK+R ELG
Sbjct: 998 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTREELG 1045
Score = 41 (19.5 bits), Expect = 3.4e-143, Sum P(2) = 3.4e-143
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 600 RKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKK 659
RK E+ + A R E Y LL D++ +A+ G+ + + + + +KK
Sbjct: 72 RKAVAEKPARAAEREARALLEKNRSYRLLEDSEESSEEAVGRAGSSLQKKRKKRKHLRKK 131
Query: 660 LNIEETKKSLPIYPFK 675
EE ++ P K
Sbjct: 132 RQEEEEEEEEEEVPEK 147
Score = 39 (18.8 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 558 AKEHDKARELEKVQRYYMPKGT 579
A + KA+ELE MPK T
Sbjct: 1016 APHYYKAKELEDPHAKKMPKKT 1037
Score = 37 (18.1 bits), Expect = 8.9e-143, Sum P(2) = 8.9e-143
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 509 RRKYLEKRKEDKVAELEAD 527
+RK+L K+++++ E E +
Sbjct: 124 KRKHLRKKRQEEEEEEEEE 142
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 1379 (490.5 bits), Expect = 5.3e-241, Sum P(2) = 5.3e-241
Identities = 253/356 (71%), Positives = 300/356 (84%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQ KCFRLYTAWAY+HE
Sbjct: 690 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 749
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 750 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 809
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 810 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 869
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 870 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 929
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + V +RKAIT+GYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+L
Sbjct: 930 VGLTSCQGDYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLL 988
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 989 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKVGKTREELG 1044
Score = 967 (345.5 bits), Expect = 5.3e-241, Sum P(2) = 5.3e-241
Identities = 181/229 (79%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SATL
Sbjct: 499 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATL 558
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 559 DTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 618
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 619 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 678
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 679 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 727
Score = 786 (281.7 bits), Expect = 7.4e-222, Sum P(2) = 7.4e-222
Identities = 162/359 (45%), Positives = 229/359 (63%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+ R ++P+LR +SRR
Sbjct: 176 DLEERDAFAERVRQRDKDRTRNVL-ERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 234
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E LF + EL+ A+E+ A E EK+
Sbjct: 235 EYLAKREREKLEDLEAELADEEVLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKL 294
Query: 571 Q---RYYMPKGTKG-PXXXXXXXXXXX-XPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MPK T+G P P EQR+WE+ ++ +A + GA+D QE Q
Sbjct: 295 EATNRYHMPKETRGQPARATDIVEEESGAPGEEQRRWEEARLDAASLKFGARDAAAQEPQ 354
Query: 625 YELLL--DNQIDFIQALSLPGNRDKGE-EEMTEKQKKKLNIEETKKSLPIYPFKQDLIDA 681
Y+L+L D I+F++A L G+ + ++ + ++K +I+ ++SLP++PF+++L+ A
Sbjct: 355 YQLVLEEDETIEFVRAAQLQGDEEPSSGPPLSAQAQQKESIQAVRRSLPVFPFREELLTA 414
Query: 682 VRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGV 741
+ +HQVLIIEGETGSGKTTQIPQYL E G+TK MKI CTQP EMGV
Sbjct: 415 IANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGV 474
Query: 742 KLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
KLG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 475 KLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTD 533
Score = 645 (232.1 bits), Expect = 2.2e-163, Sum P(2) = 2.2e-163
Identities = 119/168 (70%), Positives = 141/168 (83%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 878 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQG 937
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ V +RKAIT+GYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+LYHELV TT
Sbjct: 938 DYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 996
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 997 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKVGKTREELG 1044
Score = 38 (18.4 bits), Expect = 8.9e-143, Sum P(2) = 8.9e-143
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 509 RRKYLEKRKEDKVAELE 525
RRK+L K+++++ E E
Sbjct: 123 RRKHLRKKQQEEEEEEE 139
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 1380 (490.8 bits), Expect = 6.8e-241, Sum P(2) = 6.8e-241
Identities = 253/356 (71%), Positives = 300/356 (84%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQ KCFRLYTAWAY+HE
Sbjct: 687 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 746
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 747 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 806
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 807 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 866
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 867 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 926
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+L
Sbjct: 927 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLL 985
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 986 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 1041
Score = 965 (344.8 bits), Expect = 6.8e-241, Sum P(2) = 6.8e-241
Identities = 180/229 (78%), Positives = 208/229 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SAT+
Sbjct: 496 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATM 555
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 556 DTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 615
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATN
Sbjct: 616 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATN 675
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTI+ IIYV+DPGFCKQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 676 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 724
Score = 784 (281.0 bits), Expect = 9.5e-222, Sum P(2) = 9.5e-222
Identities = 159/358 (44%), Positives = 229/358 (63%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+ R ++P+LR +SRR
Sbjct: 174 DLEERDAFAERVRQRDKDRTRNVL-ERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 232
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ A+E+ A E EK+
Sbjct: 233 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKL 292
Query: 571 Q---RYYMPKGTKG-PXXXXXXXXXXX-XPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MPK T+G P P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 293 EATNRYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 352
Query: 625 YELLLDNQ--IDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAV 682
Y+L+L+ + I+F++A L G+ + + + ++K +I+ ++SLP++PF+++L+ A+
Sbjct: 353 YQLVLEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAI 412
Query: 683 RDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVK 742
+HQVLIIEGETGSGKTTQIPQYL E G+T MKI CTQP EMGVK
Sbjct: 413 ANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVK 472
Query: 743 LGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
LG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 473 LGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTD 530
Score = 646 (232.5 bits), Expect = 2.8e-163, Sum P(2) = 2.8e-163
Identities = 119/168 (70%), Positives = 141/168 (83%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 875 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 934
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+LYHELV TT
Sbjct: 935 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 993
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 994 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 1041
Score = 40 (19.1 bits), Expect = 4.3e-143, Sum P(2) = 4.3e-143
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 646 DKGEEEMTEKQKKKL--NIEETKK 667
++ EEE +EK KKK + ++T+K
Sbjct: 134 EEEEEEASEKGKKKTGGSKQQTEK 157
Score = 40 (19.1 bits), Expect = 4.3e-143, Sum P(2) = 4.3e-143
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 600 RKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKK 659
RK E+ + A R E Y LL D++ + +S G+ + + + + +KK
Sbjct: 72 RKAVVEKPARAAEREARALLEKNRSYRLLEDSEESSEETVSRAGSSLQKKRKKRKHLRKK 131
Query: 660 LNIEETKKS 668
EE +++
Sbjct: 132 REEEEEEEA 140
Score = 37 (18.1 bits), Expect = 8.9e-143, Sum P(2) = 8.9e-143
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 509 RRKYLEKRKEDKVAE 523
+RK+L K++E++ E
Sbjct: 124 KRKHLRKKREEEEEE 138
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1335 (475.0 bits), Expect = 9.4e-233, Sum P(2) = 9.4e-233
Identities = 244/354 (68%), Positives = 295/354 (83%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPGF KQN+F++R+G+E L VV ISKA+ANQ KCFRLYTAWAYKHEL
Sbjct: 654 YVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHEL 713
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E+ +PEIQR NLGN VLMLK+LGI+DL+HFDFLDPPP ETLV+ALEQLYALGALNH G+
Sbjct: 714 EEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGE 773
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGRRMAEFP DP M KM++ASEKY+C EEIVTIA+MLS N A+FYRPK ++IHAD+A
Sbjct: 774 LTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSA 833
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
RK F+ GDH+ L+N+YN+W ++ FS +WC EN++QHR+MKRARDVR+QL+GL++RVE+
Sbjct: 834 RKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEI 893
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
E S+ T+T+ IRKAITAGYFY+++KL +G YKT KH T HPNS LFEE PRWV+Y
Sbjct: 894 ETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVY 952
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL 1150
ELVFT+KEFMR+++EIES WLLEVAPHYYK RELED+TNKKMPK GKS +L
Sbjct: 953 FELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGKDL 1006
Score = 933 (333.5 bits), Expect = 9.4e-233, Sum P(2) = 9.4e-233
Identities = 187/242 (77%), Positives = 209/242 (86%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFL+EPDLASYSVM+IDEAHERTLHTDILFGLVKDI RFR DLKLLISSATL
Sbjct: 461 MTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATL 520
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVF 119
DA+KFS FFDDAP+FRIPGRRFPVDIYYT+APEADY+DA +V+I+QIH TQPL GDILVF
Sbjct: 521 DAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVF 580
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
LTGQEEIET E L +R + LGSKIKELI LPVY+NLP+D+Q KIF PTP +ARKVVLAT
Sbjct: 581 LTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLAT 640
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
NIAETS+TID I YVIDPGF KQN+F++R+G+E L VV ISKA+ANQRAG P
Sbjct: 641 NIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKC 700
Query: 240 FR 241
FR
Sbjct: 701 FR 702
Score = 798 (286.0 bits), Expect = 1.8e-218, Sum P(2) = 1.8e-218
Identities = 168/355 (47%), Positives = 228/355 (64%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIES 508
D D ERD + R+ ++K+ T+NV ++D S DK LR ES
Sbjct: 155 DADIAERDALAARINKKEKDKTRNVMEKKRDDNKDKEGS--------SMDK----LREES 202
Query: 509 RRKYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELE 568
RR+YL+KRK DK+ ELEA + DD+ LF+ ++LT K H KA ++
Sbjct: 203 RRQYLKKRKVDKLEELEAIVHDDQTLFAREKLTKREKADMEYRKKVLEYTKAHGKAGDVM 262
Query: 569 KVQRYYMPKG-TKG-PXXXXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGAKDREHQEQ-Y 625
K++RY++P TK P P + KWE+EQ+ +++ +GAKD + +EQ +
Sbjct: 263 KMKRYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAKRKEQEF 322
Query: 626 ELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDH 685
ELLLD ++DFIQAL +PG ++ E TE +KKK++IEET+KSLP+Y F+ I+AV++H
Sbjct: 323 ELLLDEKVDFIQALQMPGTNEEVVE--TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEH 380
Query: 686 QVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGC 745
QVLIIEGETGSGKTTQ+PQYL+EAGF + +IGCTQP +E+G KLG
Sbjct: 381 QVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGT 440
Query: 746 EVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
+VGY+IRFEDCTSE+T++KYMTDG L REFL+EPDLASYSVM+IDEAH + D
Sbjct: 441 QVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTD 495
Score = 622 (224.0 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 110/166 (66%), Positives = 139/166 (83%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDH+ L+N+YN+W ++ FS +WC EN++QHR+MKRARDVR+QL+GL++RVE+E S+ T+
Sbjct: 842 GDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSS-TD 900
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
T+ IRKAITAGYFY+++KL +G YKT KH T HPNS LFEE PRWV+Y ELVFT+K
Sbjct: 901 TIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSK 960
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL 1317
EFMR+++EIES WLLEVAPHYYK RELED+TNKKMPK GKS +L
Sbjct: 961 EFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGKDL 1006
Score = 39 (18.8 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 558 AKEHDKARELEKVQRYYMPKGTKG 581
A + K RELE MPK KG
Sbjct: 978 APHYYKGRELEDATNKKMPKN-KG 1000
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1335 (475.0 bits), Expect = 9.4e-233, Sum P(2) = 9.4e-233
Identities = 244/354 (68%), Positives = 295/354 (83%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPGF KQN+F++R+G+E L VV ISKA+ANQ KCFRLYTAWAYKHEL
Sbjct: 654 YVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHEL 713
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E+ +PEIQR NLGN VLMLK+LGI+DL+HFDFLDPPP ETLV+ALEQLYALGALNH G+
Sbjct: 714 EEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGE 773
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGRRMAEFP DP M KM++ASEKY+C EEIVTIA+MLS N A+FYRPK ++IHAD+A
Sbjct: 774 LTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSA 833
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
RK F+ GDH+ L+N+YN+W ++ FS +WC EN++QHR+MKRARDVR+QL+GL++RVE+
Sbjct: 834 RKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEI 893
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
E S+ T+T+ IRKAITAGYFY+++KL +G YKT KH T HPNS LFEE PRWV+Y
Sbjct: 894 ETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVY 952
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL 1150
ELVFT+KEFMR+++EIES WLLEVAPHYYK RELED+TNKKMPK GKS +L
Sbjct: 953 FELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGKDL 1006
Score = 933 (333.5 bits), Expect = 9.4e-233, Sum P(2) = 9.4e-233
Identities = 187/242 (77%), Positives = 209/242 (86%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFL+EPDLASYSVM+IDEAHERTLHTDILFGLVKDI RFR DLKLLISSATL
Sbjct: 461 MTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATL 520
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVF 119
DA+KFS FFDDAP+FRIPGRRFPVDIYYT+APEADY+DA +V+I+QIH TQPL GDILVF
Sbjct: 521 DAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVF 580
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
LTGQEEIET E L +R + LGSKIKELI LPVY+NLP+D+Q KIF PTP +ARKVVLAT
Sbjct: 581 LTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLAT 640
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
NIAETS+TID I YVIDPGF KQN+F++R+G+E L VV ISKA+ANQRAG P
Sbjct: 641 NIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKC 700
Query: 240 FR 241
FR
Sbjct: 701 FR 702
Score = 798 (286.0 bits), Expect = 1.8e-218, Sum P(2) = 1.8e-218
Identities = 168/355 (47%), Positives = 228/355 (64%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIES 508
D D ERD + R+ ++K+ T+NV ++D S DK LR ES
Sbjct: 155 DADIAERDALAARINKKEKDKTRNVMEKKRDDNKDKEGS--------SMDK----LREES 202
Query: 509 RRKYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELE 568
RR+YL+KRK DK+ ELEA + DD+ LF+ ++LT K H KA ++
Sbjct: 203 RRQYLKKRKVDKLEELEAIVHDDQTLFAREKLTKREKADMEYRKKVLEYTKAHGKAGDVM 262
Query: 569 KVQRYYMPKG-TKG-PXXXXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGAKDREHQEQ-Y 625
K++RY++P TK P P + KWE+EQ+ +++ +GAKD + +EQ +
Sbjct: 263 KMKRYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAKRKEQEF 322
Query: 626 ELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDH 685
ELLLD ++DFIQAL +PG ++ E TE +KKK++IEET+KSLP+Y F+ I+AV++H
Sbjct: 323 ELLLDEKVDFIQALQMPGTNEEVVE--TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEH 380
Query: 686 QVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGC 745
QVLIIEGETGSGKTTQ+PQYL+EAGF + +IGCTQP +E+G KLG
Sbjct: 381 QVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGT 440
Query: 746 EVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
+VGY+IRFEDCTSE+T++KYMTDG L REFL+EPDLASYSVM+IDEAH + D
Sbjct: 441 QVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTD 495
Score = 622 (224.0 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 110/166 (66%), Positives = 139/166 (83%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDH+ L+N+YN+W ++ FS +WC EN++QHR+MKRARDVR+QL+GL++RVE+E S+ T+
Sbjct: 842 GDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSS-TD 900
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
T+ IRKAITAGYFY+++KL +G YKT KH T HPNS LFEE PRWV+Y ELVFT+K
Sbjct: 901 TIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSK 960
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL 1317
EFMR+++EIES WLLEVAPHYYK RELED+TNKKMPK GKS +L
Sbjct: 961 EFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGKDL 1006
Score = 39 (18.8 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 558 AKEHDKARELEKVQRYYMPKGTKG 581
A + K RELE MPK KG
Sbjct: 978 APHYYKGRELEDATNKKMPKN-KG 1000
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1380 (490.8 bits), Expect = 1.1e-231, Sum P(2) = 1.1e-231
Identities = 253/356 (71%), Positives = 300/356 (84%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQ KCFRLYTAWAY+HE
Sbjct: 206 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 265
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 266 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 325
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 326 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 385
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 386 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 445
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+L
Sbjct: 446 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLL 504
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 505 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 560
Score = 878 (314.1 bits), Expect = 1.1e-231, Sum P(2) = 1.1e-231
Identities = 162/209 (77%), Positives = 190/209 (90%)
Query: 21 VMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLDAQKFSEFFDDAPVFRIPGR 80
V+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SAT+D +FS FFDDAPVFRIPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRL 140
RFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFLTGQEEIE E+LQDR RRL
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 141 GSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFC 200
GSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATNIAETSLTI+ IIYV+DPGFC
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 214
Query: 201 KQNNFNSRTGMESLTVVPISKASANQRAG 229
KQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 215 KQKSYNPRTGMESLTVTPCSKASANQRAG 243
Score = 646 (232.5 bits), Expect = 4.4e-154, Sum P(2) = 4.4e-154
Identities = 119/168 (70%), Positives = 141/168 (83%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 394 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 453
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+LYHELV TT
Sbjct: 454 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 512
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 513 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 560
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1380 (490.8 bits), Expect = 5.9e-231, Sum P(2) = 5.9e-231
Identities = 253/356 (71%), Positives = 300/356 (84%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+DPGFCKQ ++N RTGMESLTV P SKASANQ KCFRLYTAWAY+HE
Sbjct: 206 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 265
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+ TVPEIQR +LGN VL+LK+LGI+DL+HFDFLDPPP+ETL+LALEQLYALGALNH G
Sbjct: 266 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 325
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT GR+MAE P+DPM+ KM+LASEKY C EEI+T+A+MLSVN +IFYRPKDK++HAD
Sbjct: 326 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 385
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR NFF+ GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE
Sbjct: 386 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 445
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ L S + + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+L
Sbjct: 446 VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLL 504
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1151
YHELV TTKEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 505 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 560
Score = 871 (311.7 bits), Expect = 5.9e-231, Sum P(2) = 5.9e-231
Identities = 161/209 (77%), Positives = 189/209 (90%)
Query: 21 VMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLDAQKFSEFFDDAPVFRIPGR 80
V+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SAT+D +FS FFD APVFRIPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGR 94
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRL 140
RFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFLTGQEEIE E+LQDR RRL
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 141 GSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFC 200
GSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARKVV+ATNIAETSLTI+ IIYV+DPGFC
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 214
Query: 201 KQNNFNSRTGMESLTVVPISKASANQRAG 229
KQ ++N RTGMESLTV P SKASANQRAG
Sbjct: 215 KQKSYNPRTGMESLTVTPCSKASANQRAG 243
Score = 646 (232.5 bits), Expect = 3.1e-153, Sum P(2) = 3.1e-153
Identities = 119/168 (70%), Positives = 141/168 (83%)
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
GGDHLVLLN+Y QWA++ +S+QWCYENF+Q RSM+RARDVREQL GL++RVE+ L S
Sbjct: 394 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 453
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ + +RKAITAGYFYH A+L++SG Y+T K QTV IHPNSSLFE+ PRW+LYHELV TT
Sbjct: 454 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 512
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG 1318
KEFMRQV EIES WLLEVAPHYYK +ELED KKMPK +GK+R ELG
Sbjct: 513 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREELG 560
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 1236 (440.2 bits), Expect = 4.2e-219, Sum P(2) = 4.2e-219
Identities = 223/352 (63%), Positives = 282/352 (80%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YVIDPGFCKQ FN RTGMESL + P+S+ASANQ KCFRL+TAWA+ +E
Sbjct: 754 IYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNE 813
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE+NT+PEIQR NLGN VL+LK++GINDL++FDF+DPPP +TL+ ALEQLYALGALN G
Sbjct: 814 LEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRG 873
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LTKLGR+MAEFP+DP + KM++ASEKYKC EEI+TI +MLSV IFYRPKDK AD
Sbjct: 874 QLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADA 933
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
ARK FF GDHL L+N++NQW ++ ++ QWC+ENFIQHRSMKRA+DVR+QL L++RVE
Sbjct: 934 ARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVE 993
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+ LVSN +T +IRK I +G+FY+ AKL KSG ++T KHNQ+V IHP+S LF+ P+WV+
Sbjct: 994 IPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVV 1053
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1147
YHELV TTKEFMRQ+ EI+S WL E+APH YK +++ D N+K+PK +GK +
Sbjct: 1054 YHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVND--NQKLPKNIGKKQ 1103
Score = 903 (322.9 bits), Expect = 4.2e-219, Sum P(2) = 4.2e-219
Identities = 173/229 (75%), Positives = 198/229 (86%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFL+ PDLASYSV+IIDEAHERTLHTDILFGL+KDI RFR DLKLLISSAT+
Sbjct: 563 MTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATM 622
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA++FS++FD AP F IPGR++ V +YT+APEADY+DA VV++LQIH T+PLGDILVFL
Sbjct: 623 DAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFL 682
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEE++ E+LQ R R LG+KIKELII +YS LPTD+Q KIF PTPPNARKVVLATN
Sbjct: 683 TGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATN 742
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID IIYVIDPGFCKQ FN RTGMESL + P+S+ASANQR G
Sbjct: 743 IAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKG 791
Score = 572 (206.4 bits), Expect = 8.6e-188, Sum P(3) = 8.6e-188
Identities = 143/380 (37%), Positives = 207/380 (54%)
Query: 447 DSDDDRKERD--EFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKL 504
+ + +R++R+ E S+R+K RD+ +TK + + +++ +
Sbjct: 227 EDEYEREQREVKELSDRIKKRDEKSTKKKIVDDSETKESIERKNRL-----EQNEQLETE 281
Query: 505 RIESRRKYLEKRKEDKVAELEADILDDEY-LFSEQELTXXXXXXXXXXXXXXXXAKEHDK 563
R +SRRKYL ++ ++ L+ +I ++EY LF +Q+LT A +
Sbjct: 282 RTKSRRKYLVGEEQKRLILLKREI-EEEYELFKDQKLTEQEIKDFEKKKKLYELASQRIN 340
Query: 564 ARELEKVQRYYMPKGTKGPXXXXXXXX-----------XXXXPHY--EQRKWEDEQMSSA 610
+ + Y +P K Y EQ++WE +M SA
Sbjct: 341 ESQ-QSDDYYQLPSEIKDKDSLLKSSYINDNKNKKGNDSSSSSSYNPEQKEWEQNRMKSA 399
Query: 611 IFRVGAKDREH----QEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQ------KKKL 660
I + E+YE + ++QI+FI+ L + KG+ M K + K+
Sbjct: 400 ISENRGLSTANIGGGNEEYEYVFEDQIEFIKEEVLKQGQ-KGDGVMILKPGDDGSAQAKM 458
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGC 720
I+E +KSLP+YP+++ LIDAVR++QVLII GETGSGKTTQIPQYLHEAGF+K KIGC
Sbjct: 459 TIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTG-KIGC 517
Query: 721 TQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQP EE+G KLG EVGY+IRFEDCTS++T+++YMTDG L REFL+ PD
Sbjct: 518 TQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPD 577
Query: 781 LASYSVMIIDEAHPKVYVID 800
LASYSV+IIDEAH + D
Sbjct: 578 LASYSVLIIDEAHERTLHTD 597
Score = 558 (201.5 bits), Expect = 2.0e-147, Sum P(2) = 2.0e-147
Identities = 97/163 (59%), Positives = 132/163 (80%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL L+N++NQW ++ ++ QWC+ENFIQHRSMKRA+DVR+QL L++RVE+ LVSN +
Sbjct: 943 GDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDD 1002
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
T +IRK I +G+FY+ AKL KSG ++T KHNQ+V IHP+S LF+ P+WV+YHELV TTK
Sbjct: 1003 TDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTK 1062
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1314
EFMRQ+ EI+S WL E+APH YK +++ D N+K+PK +GK +
Sbjct: 1063 EFMRQIVEIQSSWLHEIAPHIYKEKDVND--NQKLPKNIGKKQ 1103
Score = 51 (23.0 bits), Expect = 8.6e-188, Sum P(3) = 8.6e-188
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKNVATSRQD 479
+DS+ RK++++ E+ +DK + K+ + D
Sbjct: 133 SDSERKRKKKEKKKEKKDKKDKKDKKSSTRKKSD 166
Score = 49 (22.3 bits), Expect = 1.4e-187, Sum P(3) = 1.4e-187
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
+DSD +RK + + ++ K +DK + K+ +S + K
Sbjct: 131 SDSDSERKRKKKEKKKEK-KDKKDKKDKKSSTRKK 164
Score = 49 (22.3 bits), Expect = 7.9e-129, Sum P(2) = 7.9e-129
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 623 EQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKK 659
+ Y+L++D+ D + + + E + +K+KKK
Sbjct: 110 KSYKLVIDHDDDIVNSSGSSDSDSDSERKRKKKEKKK 146
Score = 48 (22.0 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1114 ESKWLLEVAPHYYKPRELEDSTN 1136
++ W E+ P KP E ED N
Sbjct: 166 DNNWDDEIEPEPIKPNEKEDENN 188
Score = 41 (19.5 bits), Expect = 9.8e-187, Sum P(3) = 9.8e-187
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 454 ERDEFSERLKNRDKNNTKNVATSRQ 478
E+++ + +N D NN N RQ
Sbjct: 182 EKEDENNNNENNDNNNDNNNLQKRQ 206
Score = 41 (19.5 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
Identities = 20/86 (23%), Positives = 35/86 (40%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLR 505
T +RK R E +E+L+ + + + KR +D+ KL
Sbjct: 262 TKESIERKNRLEQNEQLETERTKSRRKYLVGEEQKRLILLKREIEEEYELFKDQ---KLT 318
Query: 506 IESRRKYLEKRKEDKVAELEADILDD 531
E K EK+K K+ EL + +++
Sbjct: 319 -EQEIKDFEKKK--KLYELASQRINE 341
Score = 38 (18.4 bits), Expect = 1.1e-127, Sum P(2) = 1.1e-127
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 507 ESRRKYLEKRKEDK 520
E +RK EK+KE K
Sbjct: 136 ERKRKKKEKKKEKK 149
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 1189 (423.6 bits), Expect = 5.8e-211, Sum P(2) = 5.8e-211
Identities = 216/351 (61%), Positives = 280/351 (79%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF K ++N RTGMESL + PISKASA Q KC+RLYTA+ Y ++L
Sbjct: 692 YVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDL 751
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E+NTVPE+QR NL + VL LK+LGI+DLI+FDF+DPPP E LV +LE L+ALGALN G+
Sbjct: 752 EENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGE 811
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTK GRRMAEFPLDPM+ KM++ S+KYKC +EI++IA+MLS+ G+IFYRPKDK +HAD A
Sbjct: 812 LTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNA 871
Query: 977 RKNFFMLG-GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R NF GDH+ LL +Y+ W + +FSTQWCYEN+IQ RSMKRARD+R+QL GL++RVE
Sbjct: 872 RMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVE 931
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+++ SN E ++RK+I AG+F H AKL K+GSY+T KH QTV IHPNS L + LPRWV+
Sbjct: 932 IDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVV 991
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKS 1146
YHELV T+KE+MRQVTE++ +WL+E+APHYY+ +++ED+ +KKMPK GK+
Sbjct: 992 YHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKMPKGAGKA 1042
Score = 873 (312.4 bits), Expect = 5.8e-211, Sum P(2) = 5.8e-211
Identities = 168/229 (73%), Positives = 194/229 (84%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L EPDLASYSV+I+DEAHERTL TDILFGLVKDI RFR DLKLLISSAT+
Sbjct: 500 MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS++FD AP+F PGRR+PV+I YT APEADY+DA +V+IL IH +PLGDILVF
Sbjct: 560 DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIET EIL+ R+R LG+KI+ELII P+Y+NLP+++Q KIF PTP ARKVVLATN
Sbjct: 620 TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF K ++N RTGMESL + PISKASA QRAG
Sbjct: 680 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAG 728
Score = 576 (207.8 bits), Expect = 4.1e-146, Sum P(2) = 4.1e-146
Identities = 104/190 (54%), Positives = 146/190 (76%)
Query: 1125 YYKPRELE-DSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRS 1183
+Y+P++ + + N +M G GDH+ LL +Y+ W + +FSTQWCYEN+IQ RS
Sbjct: 858 FYRPKDKQVHADNARMNFHTGNV-----GDHIALLKVYSSWKETNFSTQWCYENYIQVRS 912
Query: 1184 MKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQ 1243
MKRARD+R+QL GL++RVE+++ SN E ++RK+I AG+F H AKL K+GSY+T KH Q
Sbjct: 913 MKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQ 972
Query: 1244 TVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1303
TV IHPNS L + LPRWV+YHELV T+KE+MRQVTE++ +WL+E+APHYY+ +++ED+ +
Sbjct: 973 TVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAAS 1032
Query: 1304 KKMPKTLGKS 1313
KKMPK GK+
Sbjct: 1033 KKMPKGAGKA 1042
Score = 565 (203.9 bits), Expect = 2.1e-178, Sum P(2) = 2.1e-178
Identities = 137/369 (37%), Positives = 192/369 (52%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D+KER+E + LK+RD T+ + K+ + K+ +
Sbjct: 171 DQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYL 230
Query: 511 KYLEKRKEDKVA-ELEAD--ILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKAREL 567
K E++K D++ E+E + + E L +E EL E D E
Sbjct: 231 KKREQKKLDELRDEIEDEQYLFGGEKL-TETELREFRYKKELYDLVKKRTQDE-DNVEEY 288
Query: 568 EKVQRYYMPKGTKGPXXXXXX--------XXXXXXPHYEQRKWEDEQMSSAIFRVGAKDR 619
Y G P EQ WED Q+ A + GAK++
Sbjct: 289 RIPDAYDQEGGVDQEKRFSVAVQRYRDLDSTEKMNPFAEQEAWEDHQIGKATLKFGAKNK 348
Query: 620 EHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQK-----KKLNIEE---TKKSLPI 671
+ + Y+ + ++QI+FI+ + G + E+ M KQK +K +EE ++SLPI
Sbjct: 349 QASDDYQFVFEDQINFIKESVMAG--ENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPI 406
Query: 672 YPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXX 731
Y ++ L+ AV +HQVL+I G+TGSGKTTQIPQYLHEAG+TK + K+GCTQP
Sbjct: 407 YTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTK-RGKVGCTQPRRVAAMSV 465
Query: 732 XXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDE 791
+EMGVKLG EVGY+IRFEDCTS++T++KYMTDG L RE L EPDLASYSV+I+DE
Sbjct: 466 AARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDE 525
Query: 792 AHPKVYVID 800
AH + D
Sbjct: 526 AHERTLSTD 534
Score = 39 (18.8 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 33/147 (22%), Positives = 47/147 (31%)
Query: 437 VRAFMGHFLTDSDDDRKE-----RDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXX 491
VR + L D+DDD E + SE K+ DK + S Q
Sbjct: 89 VRKQKTYALLDADDDEDEVVVEKKSSVSESRKS-DKGKKRFRKKSGQSDESDGEVAVRED 147
Query: 492 XXXXSRDKIIPKLRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXX 551
R ES + + +KE + ELE + D + + +
Sbjct: 148 SRHVRRKVSEEDDGSESEEERVRDQKERE--ELEQHLKDRDTARTRKLTEQTLSKKEKEE 205
Query: 552 XXXXXXAKEHDKARELEKVQRY-YMPK 577
A E D L KV R Y+ K
Sbjct: 206 AVRRANALEKDDLYSLRKVSRQEYLKK 232
Score = 38 (18.4 bits), Expect = 1.1e-122, Sum P(2) = 1.1e-122
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 645 RDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVR 683
RD+ E E E+ K + T+K K++ +AVR
Sbjct: 170 RDQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEAVR 208
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 1181 (420.8 bits), Expect = 4.7e-207, Sum P(2) = 4.7e-207
Identities = 215/351 (61%), Positives = 280/351 (79%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF K ++N RTGMESL V PISKASA Q KC+RLYTA+ Y ++L
Sbjct: 692 YVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDL 751
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
EDNTVPEIQR NL + VL LK+LGI++L++FDF+DPPP E L+ +LE L+ALGALN G+
Sbjct: 752 EDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGE 811
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTK GRRMAEFPLDPM+ KM++ S+KYKC +EI++IA+MLS+ +IFYRPKDK +HAD A
Sbjct: 812 LTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNA 871
Query: 977 RKNFFMLG-GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
KNF + GDH+ L IYN W + ++STQWCYEN+IQ RSMKRARD+R+QL GL++RVE
Sbjct: 872 MKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVE 931
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+++ SN E +IRK+I AG+F H AKL K+GSY+T KH QTV IHP S L + LPRWV+
Sbjct: 932 IDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVV 991
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKS 1146
YH+LV T+KE+MRQVTE++ +WL+E+APHYY+ +++ED+T+KKMPKT G++
Sbjct: 992 YHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKKMPKTSGRA 1042
Score = 844 (302.2 bits), Expect = 4.7e-207, Sum P(2) = 4.7e-207
Identities = 162/229 (70%), Positives = 189/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L EPDL SYSV+I+DEAHERTL TDILFGLVKDI R R DLKLLISSAT+
Sbjct: 500 MTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATM 559
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS+FFD AP+FR PGRR+PVDI +T APEADY+DA + ++L IH +PLGD+LVFL
Sbjct: 560 DAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFL 619
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQEEIE E L+ ++R LG+KI+ELII P+Y+NLP+++Q KIF PTP ARKVVLATN
Sbjct: 620 PGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF K ++N RTGMESL V PISKASA QR G
Sbjct: 680 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTG 728
Score = 641 (230.7 bits), Expect = 1.4e-185, Sum P(2) = 1.4e-185
Identities = 151/369 (40%), Positives = 200/369 (54%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D++ER+E + L+ RD T+ + + K+ D I LR S +
Sbjct: 172 DQREREELEQHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVDKG-D--IESLRKFSWQ 228
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAK----EHDKARE 566
+Y++KRK+ KV EL+ DI D+ YLF +++LT K E D E
Sbjct: 229 EYMKKRKQKKVLELKDDIEDEPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGE 288
Query: 567 LEKVQRYYMPKGTKGPXXXXXX--------XXXXXXPHYEQRKWEDEQMSSAIFRVGAKD 618
Y P EQ WED Q+ +A + GAK+
Sbjct: 289 YRMPDAYDQQGSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKN 348
Query: 619 REHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQ------KKKLN-IEETKKSLPI 671
+E + YE + ++QIDFI+A L G D E+EM K K + ++E +K+LPI
Sbjct: 349 KEVSDNYEFVFEDQIDFIKASVLAG--DNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPI 406
Query: 672 YPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXX 731
Y ++ L++AV+DHQVLII GETGSGKTTQIPQYLHEAG+TK K+GCTQP
Sbjct: 407 YTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTK-LGKVGCTQPRRVAAMSV 465
Query: 732 XXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDE 791
+EMG KLG EVGY+IRFEDCTSE+TI+KYMTDG L RE L EPDL SYSV+I+DE
Sbjct: 466 AARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDE 525
Query: 792 AHPKVYVID 800
AH + D
Sbjct: 526 AHERTLRTD 534
Score = 581 (209.6 bits), Expect = 6.2e-143, Sum P(2) = 6.2e-143
Identities = 105/197 (53%), Positives = 148/197 (75%)
Query: 1118 LLEVAPH-YYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L + P +Y+P++ + + M K GDH+ L IYN W + ++STQWCYE
Sbjct: 850 MLSIGPSIFYRPKDKQVHADNAM-KNFHVGNV---GDHIAFLKIYNSWKETNYSTQWCYE 905
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSY 1236
N+IQ RSMKRARD+R+QL GL++RVE+++ SN E +IRK+I AG+F H AKL K+GSY
Sbjct: 906 NYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSY 965
Query: 1237 KTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPR 1296
+T KH QTV IHP S L + LPRWV+YH+LV T+KE+MRQVTE++ +WL+E+APHYY+ +
Sbjct: 966 RTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLK 1025
Query: 1297 ELEDSTNKKMPKTLGKS 1313
++ED+T+KKMPKT G++
Sbjct: 1026 DVEDATSKKMPKTSGRA 1042
Score = 40 (19.1 bits), Expect = 4.5e-122, Sum P(2) = 4.5e-122
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 445 LTDSDDDRKERDEFSERLKNRDKNNTKNV 473
LT+ +KE++EF R DK + +++
Sbjct: 194 LTEPKMSKKEQEEFVRRDSAVDKGDIESL 222
Score = 38 (18.4 bits), Expect = 7.4e-122, Sum P(2) = 7.4e-122
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 637 QALSLPGNRDKGEEEMTEKQKK 658
Q+ S G DKG++ +K ++
Sbjct: 112 QSASKTGKSDKGQKRFRKKSEQ 133
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1054 (376.1 bits), Expect = 4.2e-195, Sum P(2) = 4.2e-195
Identities = 203/346 (58%), Positives = 263/346 (76%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+VID GF KQN +N RTGMESL VP S+ASA+Q KCFRLYT Y +EL
Sbjct: 707 FVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNEL 766
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ T PEIQR NL N VL+LK+LGIN+L+ FDF+D PP ETL+ +LE LYALGALN+ G+
Sbjct: 767 DMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGE 826
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGR+MAEFP DPM+ K L+AS KY CVEE+++I SML ++FYRPKDKI+ AD A
Sbjct: 827 LTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKA 886
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
R NF GGDHL LL+I+N+W D DFS W ENF+Q++S+ RARDVR+QL L +RVE+
Sbjct: 887 RANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEI 946
Query: 1037 ELVSNPTETVN-IRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEELPRWV 1094
ELV+N +E+++ I+KAITAGYF + A+L +SG SY+T K NQTV IHP+SS+ E+ P+ +
Sbjct: 947 ELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVI 1006
Query: 1095 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELED--STNKK 1138
+Y ELV TTKE+ RQ+TEI+ +WLLE++PHY+KP +E+ T K+
Sbjct: 1007 IYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQKTQKR 1052
Score = 858 (307.1 bits), Expect = 4.2e-195, Sum P(2) = 4.2e-195
Identities = 167/241 (69%), Positives = 198/241 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L REFL+EPDLASYSV+IIDEAHERTLHTDILFGLVKDI RFR DLK+LISSAT+
Sbjct: 515 LTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATI 574
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS +FD+APVF +PGRR+PVDIYYT PEA+YI A + +ILQIH TQP GDILVFL
Sbjct: 575 DAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFL 634
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQ+EIE +E +Q+ R LG +I E+I+ P+Y+NLP+++Q KIF PTPP ARKVVLATN
Sbjct: 635 TGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATN 694
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETS+TID + +VID GF KQN +N RTGMESL VP S+ASA+QRAG P F
Sbjct: 695 IAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCF 754
Query: 241 R 241
R
Sbjct: 755 R 755
Score = 495 (179.3 bits), Expect = 2.5e-167, Sum P(3) = 2.5e-167
Identities = 99/206 (48%), Positives = 140/206 (67%)
Query: 598 EQRKWEDEQMSSAI-FRVGAKDREHQEQYELLLDN--QIDFIQALSLPGNRDKGEEEMTE 654
EQ++WE +Q++ A+ F ++Q++ + D QIDF+ L ++MT+
Sbjct: 345 EQQRWEAQQINKALLFDQNEWLPPGEKQFDFVFDESQQIDFLLDTKLSAENPVDTDKMTD 404
Query: 655 KQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKD 714
+ +K ++E ++KSLP+Y +K DL+ A+ ++QVL+I ETGSGKTTQ+PQ+LHEAG+TK
Sbjct: 405 VKVEK-SLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKG 463
Query: 715 KMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHRE 774
KI CTQP +EM V+LG EVGY+IRFE+ TSE+T+IKY+TDG L RE
Sbjct: 464 NKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLRE 523
Query: 775 FLSEPDLASYSVMIIDEAHPKVYVID 800
FL+EPDLASYSV+IIDEAH + D
Sbjct: 524 FLTEPDLASYSVIIIDEAHERTLHTD 549
Score = 492 (178.3 bits), Expect = 2.9e-135, Sum P(2) = 2.9e-135
Identities = 104/220 (47%), Positives = 154/220 (70%)
Query: 1094 VLYHELVFTTKE-FMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL-- 1150
+L L+ ++K + +V I S L E + +Y+P++ K+ + K+RA
Sbjct: 842 MLSKSLIASSKYGCVEEVLSIVSM-LGEASSLFYRPKD-------KIMEA-DKARANFTQ 892
Query: 1151 -GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP 1209
GGDHL LL+I+N+W D DFS W ENF+Q++S+ RARDVR+QL L +RVE+ELV+N
Sbjct: 893 PGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNS 952
Query: 1210 TETVN-IRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEELPRWVLYHELV 1267
+E+++ I+KAITAGYF + A+L +SG SY+T K NQTV IHP+SS+ E+ P+ ++Y ELV
Sbjct: 953 SESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELV 1012
Query: 1268 FTTKEFMRQVTEIESKWLLEVAPHYYKPRELED--STNKK 1305
TTKE+ RQ+TEI+ +WLLE++PHY+KP +E+ T K+
Sbjct: 1013 LTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQKTQKR 1052
Score = 116 (45.9 bits), Expect = 2.5e-167, Sum P(3) = 2.5e-167
Identities = 35/135 (25%), Positives = 59/135 (43%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRD--KIIPK 503
T+ +D +ER+EF ERL+ +D N + K+ +
Sbjct: 175 TERLNDLREREEFEERLRRKDLEAATNEFVEDYSSKFSSEELALRKLADDPESWRKLASE 234
Query: 504 LRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDK 563
LR +SR++YL+ R + ++ L +I D+E LF+ ++LT A+E +
Sbjct: 235 LRKKSRQQYLKPRAQQQLEILRREIRDEEQLFAGEKLTQAEIRELEKKKELLRIAEERQR 294
Query: 564 ARELEK-VQRYYMPK 577
LEK Y MP+
Sbjct: 295 ---LEKQATEYQMPE 306
Score = 38 (18.4 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 854 HELEDNTVPEIQRIN 868
H+ E ++ PE +R+N
Sbjct: 165 HDYEKSSDPETERLN 179
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1077 (384.2 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 207/352 (58%), Positives = 262/352 (74%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVIDPGF K+N FN RTGMESL V P S+ASANQ KCFRLYT WAY +E
Sbjct: 769 VYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNE 828
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
LE++T PEIQR NL + +LMLK+LGI+ L+ FDF+DPPP ET++ ALEQLYALGALN G
Sbjct: 829 LEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRG 888
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LTK+GR+MAEFP DPM+ K +LA++K+ CVEE+++I SML A+F+RPKDK IHAD+
Sbjct: 889 ELTKIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADS 948
Query: 976 ARKNFFML-GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
AR F + GGDHL LLNI+NQW D+DFS W ENF+Q RS+ RARDVR+QL L RV
Sbjct: 949 ARNRFTVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRV 1008
Query: 1035 EMELVS-NPTETVNIRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEELPR 1092
E+ + S V I+KAITAG+F + A+L + G SY+T K QTV +HP+S+LFE PR
Sbjct: 1009 EVTVSSCGSNNIVPIQKAITAGFFPNAARLQRGGDSYRTIKTGQTVYLHPSSTLFEVNPR 1068
Query: 1093 WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLG 1144
WV+Y ELV T+KE+MR ++++WL+EVAPHYYK ++LE +K PK G
Sbjct: 1069 WVIYFELVLTSKEYMRSNMPLQAEWLVEVAPHYYKKKDLETLGTEKKPKGQG 1120
Score = 812 (290.9 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 158/241 (65%), Positives = 189/241 (78%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L+EPDL YS ++IDEAHERT+ TDI GL+KDI + R DLKLLISSAT+
Sbjct: 578 MTDGMLLRELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATM 637
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DAQKF +FD+AP+F IPGR + VDI+YT+ PEA+Y+ A + ++ QIH +Q GDILVFL
Sbjct: 638 DAQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFL 697
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIE + LQ+ R+LG+KI E+II P+Y+NLP+D+Q KIF PTPP ARKVVLATN
Sbjct: 698 TGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATN 757
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLTID I+YVIDPGF K+N FN RTGMESL V P S+ASANQRAG P F
Sbjct: 758 IAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCF 817
Query: 241 R 241
R
Sbjct: 818 R 818
Score = 512 (185.3 bits), Expect = 5.9e-161, Sum P(2) = 5.9e-161
Identities = 105/212 (49%), Positives = 137/212 (64%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDN--QIDFIQALSLPGNRDKGEEE---M 652
E +WE EQ + A ++ + + YE + D+ +I+F + G R +E +
Sbjct: 401 EHEEWEMEQTAKAKAQINRAEFVDEGDYEYVFDDTQRINFTMDAQMKGTRKLMTQEQRML 460
Query: 653 TEK----QKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE 708
EK ++K IE+T+K LPIY F+ +I AV DHQVLII GETGSGKTTQ+PQYLHE
Sbjct: 461 QEKLDQAEQKAQTIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHE 520
Query: 709 AGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTD 768
AG+TK+ MK+GCTQP EEMGVKLG EVGY+IRFED TS++T++KYMTD
Sbjct: 521 AGYTKNGMKVGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTD 580
Query: 769 GTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
G L RE L+EPDL YS ++IDEAH + D
Sbjct: 581 GMLLRELLTEPDLGQYSALMIDEAHERTVPTD 612
Score = 467 (169.5 bits), Expect = 3.0e-124, Sum P(2) = 3.0e-124
Identities = 99/209 (47%), Positives = 138/209 (66%)
Query: 1107 MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAEL--GGDHLVLLNIYNQW 1164
+ +V I S L E + +++P++ KK+ ++R + GGDHL LLNI+NQW
Sbjct: 919 VEEVLSIVSM-LGEASALFFRPKD------KKIHADSARNRFTVKDGGDHLTLLNIWNQW 971
Query: 1165 ADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS-NPTETVNIRKAITAGY 1223
D+DFS W ENF+Q RS+ RARDVR+QL L RVE+ + S V I+KAITAG+
Sbjct: 972 VDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTVSSCGSNNIVPIQKAITAGF 1031
Query: 1224 FYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIES 1282
F + A+L + G SY+T K QTV +HP+S+LFE PRWV+Y ELV T+KE+MR +++
Sbjct: 1032 FPNAARLQRGGDSYRTIKTGQTVYLHPSSTLFEVNPRWVIYFELVLTSKEYMRSNMPLQA 1091
Query: 1283 KWLLEVAPHYYKPRELEDSTNKKMPKTLG 1311
+WL+EVAPHYYK ++LE +K PK G
Sbjct: 1092 EWLVEVAPHYYKKKDLETLGTEKKPKGQG 1120
Score = 126 (49.4 bits), Expect = 3.6e-120, Sum P(2) = 3.6e-120
Identities = 53/237 (22%), Positives = 95/237 (40%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD ++RL ++D +K + R K +RD +P LR+ SR+
Sbjct: 241 DLEERDALAKRLASKDDKRSKKIVEDRT-KDSEAARRRALADDAKARDAAMPDLRLRSRQ 299
Query: 511 KYLEKRKEDKVAELEADILDD-EYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEK 569
+YL+KR+ +++A L + ++ + L LT A+E + R +
Sbjct: 300 EYLKKRETERLALLRRQVAEETQELRENPNLTRREKEEFARNREVLRIAEE--RLRIDDH 357
Query: 570 VQRYYMPKG---TKGPXXXXXXXXXXXXPHYE-----QRK-------WEDEQMSSAIFRV 614
Y MP+ KG + E Q K WE EQ + A ++
Sbjct: 358 RDGYMMPEDYITEKGKIDRKKKEDALYKRYVERDELGQEKFITEHEEWEMEQTAKAKAQI 417
Query: 615 GAKDREHQEQYELLLDN--QIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSL 669
+ + YE + D+ +I+F + G R +E Q+K E+ +++
Sbjct: 418 NRAEFVDEGDYEYVFDDTQRINFTMDAQMKGTRKLMTQEQRMLQEKLDQAEQKAQTI 474
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 983 (351.1 bits), Expect = 1.8e-185, Sum P(2) = 1.8e-185
Identities = 192/352 (54%), Positives = 255/352 (72%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVIDPG+ K+N +N TGM +L VVP S+ASANQ KCFRLYT +AY +E
Sbjct: 661 VYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNE 720
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+E++T PEIQR NL VL LK+LGIN+L+ F+F+DPPP E L+ AL QL+AL LNH G
Sbjct: 721 MEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQGLNHKG 780
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LTKLGR+MAEFP DPM+ K +LA++K CVEE+++I +MLS A+F+RPKDK +HAD
Sbjct: 781 ELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHADA 840
Query: 976 ARKNFFML-GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
AR F + GGDH+ LLNI+NQW D+D+S W ENF+Q RS+ RARDVREQL L +RV
Sbjct: 841 ARGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSKLCERV 900
Query: 1035 EMELVS--NPTETVNIRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEE-- 1089
E+ L + + I++AITAG+F + A++ +SG SY+T K+N TV IHP+S + +E
Sbjct: 901 EVTLSTCGGISNMPPIKRAITAGFFPNAARMQRSGDSYRTVKNNTTVYIHPSSVMMQEDP 960
Query: 1090 LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK 1141
PR V+Y+ELV TTKE+MR IE KWL E+APH++K +++ KK+PK
Sbjct: 961 PPRMVIYYELVQTTKEYMRSCMPIEPKWLAELAPHFHKAKDIAALEEKKLPK 1012
Score = 838 (300.0 bits), Expect = 1.8e-185, Sum P(2) = 1.8e-185
Identities = 156/241 (64%), Positives = 196/241 (81%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REF++EPDL+SYS ++IDEAHERT+HTDIL LVKD+ R R DLKLLISSAT+
Sbjct: 470 MTDGMLLREFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATM 529
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A+KF+ +FDDAP+F IPGRR+PVDIYYT APEA+Y+ A + ++ QIH TQP GDIL+FL
Sbjct: 530 NAEKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFL 589
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQ+EIE + + R+LGS++KEL+I P+Y+NLP+++Q+KIF PTP NARKVVLATN
Sbjct: 590 TGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATN 649
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLTID I+YVIDPG+ K+N +N TGM +L VVP S+ASANQR+G P F
Sbjct: 650 IAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCF 709
Query: 241 R 241
R
Sbjct: 710 R 710
Score = 500 (181.1 bits), Expect = 3.0e-152, Sum P(3) = 3.0e-152
Identities = 98/212 (46%), Positives = 144/212 (67%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQ--IDFIQALSLPGNRD--KGEE--- 650
E +WE EQ + A ++ +R+ + Y+ ++D I + + LPG GE+
Sbjct: 294 EHEEWEREQAAKAKAQIKVAERD-EAGYDYVMDEDQYIQWTRDTRLPGEGKVLTGEQLYL 352
Query: 651 --EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE 708
++ +K++L+++ET+KSLPIY ++ + + A+ +Q+L+I GETGSGKTTQ+PQYLHE
Sbjct: 353 QAQIDAAEKRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHE 412
Query: 709 AGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTD 768
AG+TKD M++GCTQP +EMGVK+G EVGY+IRFED TS++TI+KYMTD
Sbjct: 413 AGYTKDGMRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTD 472
Query: 769 GTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
G L REF++EPDL+SYS ++IDEAH + D
Sbjct: 473 GMLLREFMTEPDLSSYSALMIDEAHERTVHTD 504
Score = 427 (155.4 bits), Expect = 6.3e-126, Sum P(2) = 6.3e-126
Identities = 88/196 (44%), Positives = 130/196 (66%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
L E + +++P++ + + G+ + GGDH+ LLNI+NQW D+D+S W EN
Sbjct: 821 LSEASALFFRPKDKQVHADAAR----GRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKEN 876
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVS--NPTETVNIRKAITAGYFYHIAKLSKSG- 1234
F+Q RS+ RARDVREQL L +RVE+ L + + I++AITAG+F + A++ +SG
Sbjct: 877 FLQQRSLTRARDVREQLSKLCERVEVTLSTCGGISNMPPIKRAITAGFFPNAARMQRSGD 936
Query: 1235 SYKTAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
SY+T K+N TV IHP+S + +E PR V+Y+ELV TTKE+MR IE KWL E+APH+
Sbjct: 937 SYRTVKNNTTVYIHPSSVMMQEDPPPRMVIYYELVQTTKEYMRSCMPIEPKWLAELAPHF 996
Query: 1293 YKPRELEDSTNKKMPK 1308
+K +++ KK+PK
Sbjct: 997 HKAKDIAALEEKKLPK 1012
Score = 102 (41.0 bits), Expect = 2.4e-110, Sum P(3) = 2.4e-110
Identities = 60/262 (22%), Positives = 102/262 (38%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
DR ER+ FS RLK RD +K ++D R + + LR SR+
Sbjct: 137 DRAEREAFSNRLKERDDGRSKK--GGKED--LATSLRRSLADDAKGRSEAVADLRERSRQ 192
Query: 511 KYLEKRKEDKVAELEADILDDEY-LFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEK 569
+Y +KR+ +K+A + ++ L S L+ +E + R +
Sbjct: 193 EYFKKRETEKIALFRKQVAEETAELRSGVALSEKEKAEFAENRKLLALIEE--RLRIDDH 250
Query: 570 VQRYYMPKG---TKGPXXXXXXXXXXXXPH-----YEQRK-------WEDEQMSSAIFRV 614
YYMP+ KG + Y Q K WE EQ + A ++
Sbjct: 251 RDGYYMPEDYITEKGKIDRKKKEDALYKRYVEKDEYGQEKFVTEHEEWEREQAAKAKAQI 310
Query: 615 GAKDREHQEQYELLLDNQ--IDFIQALSLPGNRD--KGEEEMTEKQKKKLNIEETKKSLP 670
+R+ + Y+ ++D I + + LPG GE+ + Q ++ E K+ L
Sbjct: 311 KVAERD-EAGYDYVMDEDQYIQWTRDTRLPGEGKVLTGEQLYLQAQ---IDAAE-KRQLS 365
Query: 671 IYPFKQDL-IDAVRDHQVLIIE 691
+ ++ L I RD + +E
Sbjct: 366 MQETRKSLPIYVYRDEFLAALE 387
Score = 41 (19.5 bits), Expect = 6.4e-35, Sum P(2) = 6.4e-35
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 82 FPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
FP D KA A + CV +L I A L F +++
Sbjct: 792 FPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQV 836
Score = 39 (18.8 bits), Expect = 3.0e-152, Sum P(3) = 3.0e-152
Identities = 7/34 (20%), Positives = 18/34 (52%)
Query: 433 KTPKVRAFMGHFLTDSDDDRKERDEFSERLKNRD 466
++P + H+ + + D R++ D S R +++
Sbjct: 51 RSPARESSSKHYRSRAKDSRRDYDRHSSRRDDKE 84
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 933 (333.5 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 182/353 (51%), Positives = 240/353 (67%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 853 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 912
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 913 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 972
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 973 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1031
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1032 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1091
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1092 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1151
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
HELV TTKE+MR+VT I+ +WL+E AP ++K + D T K+ K + R E
Sbjct: 1152 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK---VSDPT--KLSKQKKQQRLE 1199
Score = 784 (281.0 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 661 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 720
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 721 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 780
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 781 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 840
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 841 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 889
Score = 429 (156.1 bits), Expect = 1.6e-115, Sum P(2) = 1.6e-115
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 1011 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1065
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1066 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1125
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1126 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK--- 1182
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T K+ K + R E
Sbjct: 1183 VSDPT--KLSKQKKQQRLE 1199
Score = 402 (146.6 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 544 GGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 603
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 604 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 662
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 663 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 695
Score = 62 (26.9 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSR---QDKRXXXXXXXXXXXXXXSRDKIIPKLR 505
D + ++R + +R ++RD+N ++ R +D + R+K+ + R
Sbjct: 164 DAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYR 223
Query: 506 IESRRKYLEK-RKE-DKVAELEADILDDEYL 534
SR + K RK+ DK E D D+++
Sbjct: 224 SRSRSQSPPKDRKDRDKYGERNLDRWRDKHV 254
Score = 59 (25.8 bits), Expect = 9.1e-139, Sum P(3) = 9.1e-139
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 448 SDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIE 507
S D ++RD ER ++RD + ++ + SR R SR + PK R +
Sbjct: 179 SRDRNRDRDRDRERNRDRD-HKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDR-K 236
Query: 508 SRRKYLEKRKEDKVAELEAD 527
R KY E R D+ + D
Sbjct: 237 DRDKYGE-RNLDRWRDKHVD 255
Score = 57 (25.1 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1109 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1144
Score = 47 (21.6 bits), Expect = 1.7e-137, Sum P(3) = 1.7e-137
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSR 477
D D R+ R R + R++N K+ SR
Sbjct: 195 DRDHKRRHRSRSRSRSRTRERNKVKSRYRSR 225
Score = 38 (18.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 158 TDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDP 197
T+ +T + P P +V A + + SL + + DP
Sbjct: 358 TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDP 397
Score = 37 (18.1 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKS 668
+FIQA SL +D ++ + + KL++ KS
Sbjct: 1065 NFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS 1099
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 933 (333.5 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 182/353 (51%), Positives = 240/353 (67%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 863 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 922
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 923 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 982
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 983 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1041
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1042 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1101
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1102 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1161
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
HELV TTKE+MR+VT I+ +WL+E AP ++K + D T K+ K + R E
Sbjct: 1162 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK---VSDPT--KLSKQKKQQRLE 1209
Score = 784 (281.0 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 671 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 730
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 731 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 790
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 791 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 850
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 851 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 899
Score = 429 (156.1 bits), Expect = 1.8e-115, Sum P(2) = 1.8e-115
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 1021 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1075
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1076 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1135
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1136 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK--- 1192
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T K+ K + R E
Sbjct: 1193 VSDPT--KLSKQKKQQRLE 1209
Score = 402 (146.6 bits), Expect = 5.0e-138, Sum P(3) = 5.0e-138
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 554 GGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 613
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 614 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 672
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 673 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 705
Score = 57 (25.1 bits), Expect = 3.3e-76, Sum P(2) = 3.3e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1119 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1154
Score = 52 (23.4 bits), Expect = 5.0e-138, Sum P(3) = 5.0e-138
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 453 KERDEFSERLKNRDKNNTK-NVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRRK 511
+ERD ER + RD+++ + + + SR R SR + P+ R + R K
Sbjct: 192 RERDRDRERERERDRDHKRRHRSRSRSRSRTRDRNKGKSRYRSRSRSQSPPRDR-KDRDK 250
Query: 512 YLEKRKEDKVAELEAD 527
Y + R D+ + D
Sbjct: 251 YGD-RNLDRWRDKHVD 265
Score = 49 (22.3 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSR 477
D D R+ R R + RD+N K+ SR
Sbjct: 205 DRDHKRRHRSRSRSRSRTRDRNKGKSRYRSR 235
Score = 46 (21.3 bits), Expect = 2.1e-137, Sum P(3) = 2.1e-137
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 451 DRKERDEFSERLKNRDKNNTKNV 473
DRK+RD++ +R N D+ K+V
Sbjct: 244 DRKDRDKYGDR--NLDRWRDKHV 264
Score = 38 (18.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 158 TDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDP 197
T+ +T + P P +V A + + SL + + DP
Sbjct: 368 TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDP 407
Score = 37 (18.1 bits), Expect = 4.2e-74, Sum P(2) = 4.2e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKS 668
+FIQA SL +D ++ + + KL++ KS
Sbjct: 1075 NFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS 1109
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 933 (333.5 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 182/353 (51%), Positives = 240/353 (67%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 845 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 904
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 905 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 964
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 965 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1023
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1024 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1083
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1084 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1143
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
HELV TTKE+MR+VT I+ +WL+E AP ++K + D T K+ K + R E
Sbjct: 1144 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK---VSDPT--KLSKQKKQQRLE 1191
Score = 784 (281.0 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 653 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 712
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 713 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 772
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 773 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 832
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 833 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 881
Score = 429 (156.1 bits), Expect = 1.5e-115, Sum P(2) = 1.5e-115
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 1003 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1057
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1058 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1117
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1118 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK--- 1174
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T K+ K + R E
Sbjct: 1175 VSDPT--KLSKQKKQQRLE 1191
Score = 402 (146.6 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 536 GGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 595
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 596 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 654
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 655 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 687
Score = 57 (25.1 bits), Expect = 2.6e-76, Sum P(2) = 2.6e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1101 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1136
Score = 49 (22.3 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 451 DRKERDEFSERLKNRDKNNTKNV 473
DRK+RD++ ER N D+ K+V
Sbjct: 226 DRKDRDKYGER--NLDRWRDKHV 246
Score = 44 (20.5 bits), Expect = 3.5e-137, Sum P(3) = 3.5e-137
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSR 477
+ D D K R R + R++N K+ SR
Sbjct: 187 ERDRDHKRRHRSRSRSRTRERNKGKSRYRSR 217
Score = 42 (19.8 bits), Expect = 5.6e-137, Sum P(3) = 5.6e-137
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSR 477
D D R+ R R + R+K ++ + SR
Sbjct: 189 DRDHKRRHRSRSRSRTRERNKGKSRYRSRSR 219
Score = 38 (18.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 158 TDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDP 197
T+ +T + P P +V A + + SL + + DP
Sbjct: 350 TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDP 389
Score = 37 (18.1 bits), Expect = 3.4e-74, Sum P(2) = 3.4e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKS 668
+FIQA SL +D ++ + + KL++ KS
Sbjct: 1057 NFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS 1091
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 933 (333.5 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 182/353 (51%), Positives = 240/353 (67%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 849 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 908
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 909 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 968
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 969 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1027
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1028 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1087
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1088 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1147
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
HELV TTKE+MR+VT I+ +WL+E AP ++K + D T K+ K + R E
Sbjct: 1148 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK---VSDPT--KLSKQKKQQRLE 1195
Score = 784 (281.0 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 657 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 716
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 717 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 776
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 777 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 836
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 837 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 885
Score = 429 (156.1 bits), Expect = 1.5e-115, Sum P(2) = 1.5e-115
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 1007 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1061
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1062 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1121
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1122 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK--- 1178
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T K+ K + R E
Sbjct: 1179 VSDPT--KLSKQKKQQRLE 1195
Score = 402 (146.6 bits), Expect = 3.9e-138, Sum P(3) = 3.9e-138
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 540 GGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 599
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 600 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 658
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 659 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 691
Score = 57 (25.1 bits), Expect = 2.8e-76, Sum P(2) = 2.8e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1105 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1140
Score = 53 (23.7 bits), Expect = 3.9e-138, Sum P(3) = 3.9e-138
Identities = 20/88 (22%), Positives = 39/88 (44%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIES 508
D + +++ + +R ++RD++ + R+ KR R+K + R S
Sbjct: 164 DAEHRDKAKKKKRSRSRDRDRERERDRDREHKRRHRSRSRSRSRTR-ERNKGKSRYRSRS 222
Query: 509 RRKYLEK-RKE-DKVAELEADILDDEYL 534
R + K RK+ DK E D D+++
Sbjct: 223 RSQSPPKDRKDRDKYGERNLDRWRDKHV 250
Score = 43 (20.2 bits), Expect = 4.4e-137, Sum P(3) = 4.4e-137
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
+ D DR+ + R ++R + +N SR R
Sbjct: 187 ERDRDREHKRRHRSRSRSRSRTRERNKGKSRYRSR 221
Score = 38 (18.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
D D + K R R ++R + K + R R
Sbjct: 189 DRDREHKRRHRSRSRSRSRTRERNKGKSRYRSRSR 223
Score = 38 (18.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 158 TDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDP 197
T+ +T + P P +V A + + SL + + DP
Sbjct: 354 TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDP 393
Score = 37 (18.1 bits), Expect = 3.6e-74, Sum P(2) = 3.6e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKS 668
+FIQA SL +D ++ + + KL++ KS
Sbjct: 1061 NFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS 1095
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 933 (333.5 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 182/353 (51%), Positives = 240/353 (67%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 877 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 936
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 937 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 996
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 997 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1055
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1056 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1115
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1116 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1175
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
HELV TTKE+MR+VT I+ +WL+E AP ++K + D T K+ K + R E
Sbjct: 1176 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK---VSDPT--KLSKQKKQQRLE 1223
Score = 784 (281.0 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 685 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 744
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 745 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 804
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 805 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 864
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 865 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 913
Score = 429 (156.1 bits), Expect = 2.2e-115, Sum P(2) = 2.2e-115
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 1035 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1089
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1090 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1149
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1150 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK--- 1206
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T K+ K + R E
Sbjct: 1207 VSDPT--KLSKQKKQQRLE 1223
Score = 402 (146.6 bits), Expect = 2.1e-137, Sum P(3) = 2.1e-137
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 568 GGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 627
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 628 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 686
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 687 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 719
Score = 57 (25.1 bits), Expect = 3.9e-76, Sum P(2) = 3.9e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1133 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1168
Score = 46 (21.3 bits), Expect = 2.1e-137, Sum P(3) = 2.1e-137
Identities = 14/75 (18%), Positives = 28/75 (37%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIES 508
D + ++R + +R ++RD++ ++ R R RD+ + R
Sbjct: 164 DPEHRDRTKKKKRSRSRDRDRDRDRDRDRDRDRDRDRDKDRERDRDRERDRERDRERDHK 223
Query: 509 RRKYLEKRKEDKVAE 523
RR R + E
Sbjct: 224 RRHRSRSRSHSRTRE 238
Score = 45 (20.9 bits), Expect = 2.7e-137, Sum P(3) = 2.7e-137
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 451 DRKERDEFSERLKNRDKNNTKNV 473
DRK+R+++ ER N D+ K+V
Sbjct: 258 DRKDREKYGER--NLDRWRDKHV 278
Score = 40 (19.1 bits), Expect = 9.2e-137, Sum P(3) = 9.2e-137
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
D + D K R R +R + TK + R R
Sbjct: 217 DRERDHKRRHRSRSRSHSRTRERTKGKSRYRSRSR 251
Score = 38 (18.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 158 TDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDP 197
T+ +T + P P +V A + + SL + + DP
Sbjct: 382 TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDP 421
Score = 37 (18.1 bits), Expect = 5.0e-74, Sum P(2) = 5.0e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKS 668
+FIQA SL +D ++ + + KL++ KS
Sbjct: 1089 NFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS 1123
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 933 (333.5 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 182/353 (51%), Positives = 240/353 (67%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 822 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 881
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 882 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 941
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 942 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1000
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1001 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1060
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1061 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1120
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
HELV TTKE+MR+VT I+ +WL+E AP ++K + D T K+ K + R E
Sbjct: 1121 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK---VSDPT--KLSKQKKQQRLE 1168
Score = 784 (281.0 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 630 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 689
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 690 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 749
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 750 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 809
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 810 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 858
Score = 429 (156.1 bits), Expect = 1.4e-115, Sum P(2) = 1.4e-115
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 980 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1034
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1035 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1094
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1095 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK--- 1151
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T K+ K + R E
Sbjct: 1152 VSDPT--KLSKQKKQQRLE 1168
Score = 402 (146.6 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 513 GGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 572
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 573 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 631
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 632 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 664
Score = 62 (26.9 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 19/90 (21%), Positives = 38/90 (42%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXX-SRDKIIPKL 504
D D DR ++RD +R ++RD+ + R KR ++ K +
Sbjct: 134 DRDRDRDRDRDRDKDRERDRDRERDRERDRDRDHKRRHRSRSRSHSRTRERAKGKSRYRS 193
Query: 505 RIESRRKYLEKRKEDKVAELEADILDDEYL 534
R S+ + +++ +K E D D+++
Sbjct: 194 RSRSQSPFKDRKDREKYGERNLDRWRDKHV 223
Score = 57 (25.1 bits), Expect = 2.6e-76, Sum P(2) = 2.6e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1078 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1113
Score = 40 (19.1 bits), Expect = 9.2e-137, Sum P(3) = 9.2e-137
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 453 KERDEFSERLKNRDKNNTKNVATSRQDKR 481
++RD +R ++RD++ K+ R +R
Sbjct: 129 RDRDRDRDRDRDRDRDRDKDRERDRDRER 157
Score = 38 (18.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 158 TDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDP 197
T+ +T + P P +V A + + SL + + DP
Sbjct: 327 TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDP 366
Score = 37 (18.1 bits), Expect = 3.3e-74, Sum P(2) = 3.3e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKS 668
+FIQA SL +D ++ + + KL++ KS
Sbjct: 1034 NFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS 1068
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 933 (333.5 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 182/353 (51%), Positives = 240/353 (67%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 875 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 934
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 935 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 994
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 995 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1053
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1054 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1113
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1114 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1173
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
HELV TTKE+MR+VT I+ +WL+E AP ++K + D T K+ K + R E
Sbjct: 1174 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK---VSDPT--KLSKQKKQQRLE 1221
Score = 784 (281.0 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 683 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 742
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 743 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 802
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 803 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 862
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 863 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 911
Score = 429 (156.1 bits), Expect = 2.1e-115, Sum P(2) = 2.1e-115
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 1033 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1087
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1088 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1147
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1148 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK--- 1204
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T K+ K + R E
Sbjct: 1205 VSDPT--KLSKQKKQQRLE 1221
Score = 402 (146.6 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 566 GGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 625
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 626 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 684
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 685 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 717
Score = 62 (26.9 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 19/90 (21%), Positives = 38/90 (42%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXX-SRDKIIPKL 504
D D DR ++RD +R ++RD+ + R KR ++ K +
Sbjct: 187 DRDRDRDRDRDRDKDRERDRDRERDRERDRDRDHKRRHRSRSRSHSRTRERAKGKSRYRS 246
Query: 505 RIESRRKYLEKRKEDKVAELEADILDDEYL 534
R S+ + +++ +K E D D+++
Sbjct: 247 RSRSQSPFKDRKDREKYGERNLDRWRDKHV 276
Score = 57 (25.1 bits), Expect = 3.8e-76, Sum P(2) = 3.8e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1131 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1166
Score = 40 (19.1 bits), Expect = 9.2e-137, Sum P(3) = 9.2e-137
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 453 KERDEFSERLKNRDKNNTKNVATSRQDKR 481
++RD +R ++RD++ K+ R +R
Sbjct: 182 RDRDRDRDRDRDRDRDRDKDRERDRDRER 210
Score = 38 (18.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 158 TDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDP 197
T+ +T + P P +V A + + SL + + DP
Sbjct: 380 TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDP 419
Score = 37 (18.1 bits), Expect = 4.9e-74, Sum P(2) = 4.9e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKS 668
+FIQA SL +D ++ + + KL++ KS
Sbjct: 1087 NFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS 1121
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 932 (333.1 bits), Expect = 2.2e-174, Sum P(2) = 2.2e-174
Identities = 182/353 (51%), Positives = 240/353 (67%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 801 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 860
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 861 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 920
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 921 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 979
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 980 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1039
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1040 DVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1099
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
HELV TTKE+MR+VT I+ +WL+E AP ++K + D T K+ K + R E
Sbjct: 1100 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK---VSDPT--KLSKQKKQQRLE 1147
Score = 784 (281.0 bits), Expect = 2.2e-174, Sum P(2) = 2.2e-174
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 609 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 668
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 669 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 728
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 729 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 788
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 789 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 837
Score = 428 (155.7 bits), Expect = 9.3e-116, Sum P(2) = 9.3e-116
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 959 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1013
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1014 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYR 1073
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1074 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK--- 1130
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T K+ K + R E
Sbjct: 1131 VSDPT--KLSKQKKQQRLE 1147
Score = 400 (145.9 bits), Expect = 5.6e-137, Sum P(3) = 5.6e-137
Identities = 81/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +L+I E ++SLPI+ K+ LI AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 492 GGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLA 551
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 552 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 610
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 611 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 643
Score = 57 (25.1 bits), Expect = 1.3e-76, Sum P(2) = 1.3e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1057 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1092
Score = 45 (20.9 bits), Expect = 5.6e-137, Sum P(3) = 5.6e-137
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
D R+ R R + RD+N K+ SR R
Sbjct: 177 DRKRRHRSRSRSRSRTRDRNRGKSRYYSRSRSR 209
Score = 42 (19.8 bits), Expect = 1.2e-136, Sum P(3) = 1.2e-136
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 451 DRKERDEFSERLKNR--DKN 468
DR++RD++ ER R DK+
Sbjct: 214 DRRDRDKYLERSNERWRDKH 233
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 927 (331.4 bits), Expect = 7.5e-174, Sum P(2) = 7.5e-174
Identities = 176/331 (53%), Positives = 231/331 (69%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 843 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 902
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 903 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 962
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 963 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1021
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1022 KAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1081
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P WV+Y
Sbjct: 1082 DVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVY 1141
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
HELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1142 HELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1172
Score = 784 (281.0 bits), Expect = 7.5e-174, Sum P(2) = 7.5e-174
Identities = 144/229 (62%), Positives = 189/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R+D+KL+++SATL
Sbjct: 651 MTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATL 710
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV++ YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 711 DAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 770
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 771 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 830
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 831 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 879
Score = 424 (154.3 bits), Expect = 4.8e-115, Sum P(2) = 4.8e-115
Identities = 79/177 (44%), Positives = 119/177 (67%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 1001 MLSVQNVFYRPKDKQALADQKKAKF---HQPE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1055
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1056 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYR 1115
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
T Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ +WL+E AP ++K
Sbjct: 1116 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1172
Score = 406 (148.0 bits), Expect = 1.7e-137, Sum P(3) = 1.7e-137
Identities = 86/170 (50%), Positives = 109/170 (64%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +L+I E ++SLPIY K+ LI AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 534 GGNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLA 593
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 594 EAGYTT-RGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMT 652
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGF-CKQNNFNSRTGME 816
DG L RE L +PDL Y+++++DEAH + D F + RT M+
Sbjct: 653 DGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMK 702
Score = 57 (25.1 bits), Expect = 2.6e-76, Sum P(2) = 2.6e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1099 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1134
Score = 49 (22.3 bits), Expect = 1.7e-137, Sum P(3) = 1.7e-137
Identities = 16/75 (21%), Positives = 28/75 (37%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLR 505
T S +K R R ++RD++ + R D+R RD+ + R
Sbjct: 159 TSSSSRKKRRSRSRSRDRDRDRDRDRERDRDR-DRRRRHRSRSRSRSRSNERDRRKRRSR 217
Query: 506 IESRRKYLEKRKEDK 520
SR + + D+
Sbjct: 218 WHSRSRSRSPARTDR 232
Score = 39 (18.8 bits), Expect = 1.9e-136, Sum P(3) = 1.9e-136
Identities = 14/78 (17%), Positives = 27/78 (34%)
Query: 450 DDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESR 509
D KE + F + + +++K+ + + R RD+ + R R
Sbjct: 133 DAMKELEMFMPSVSGTEPSSSKHRSETSSSSRKKRRSRSRSRDRDRDRDRDRERDRDRDR 192
Query: 510 RKYLEKRKEDKVAELEAD 527
R+ R + E D
Sbjct: 193 RRRHRSRSRSRSRSNERD 210
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 944 (337.4 bits), Expect = 3.2e-173, Sum P(2) = 3.2e-173
Identities = 176/342 (51%), Positives = 242/342 (70%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPGF KQ FN + GM+SL V PIS+A+A Q KC+RLYT A+K+E+
Sbjct: 796 YVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEM 855
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+++PEIQR NLGN VL +KA+GINDL++FDF+DPPP +TLV A+EQLY+LGAL+ G
Sbjct: 856 LASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGL 915
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGR+MAEFPLDP + KML+AS C +EI+T+ +MLSV +FYRPK+K AD
Sbjct: 916 LTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQK 974
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ FF GDHL LLN+Y W ++ FS WC+ENF+Q RS++RA+DVR+QLI ++ R ++
Sbjct: 975 KAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKL 1034
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
+++S I+KAI +G+F + +K + YKT Q V IHP+S+LF P WV+Y
Sbjct: 1035 DIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIY 1094
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1138
HELV TTKE+MR+V I+ KWL+E+AP ++K + + +K
Sbjct: 1095 HELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRK 1136
Score = 761 (272.9 bits), Expect = 3.2e-173, Sum P(2) = 3.2e-173
Identities = 145/229 (63%), Positives = 190/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +P+L++YSV+I+DEAHERT+ TD+LFGL+K ++ R +LK+LI+SATL
Sbjct: 604 MTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATL 663
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A+KFS++F +A +F IPGR FPVDI YTK PEADY+DA +++++QIH ++P GDIL+FL
Sbjct: 664 EAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFL 723
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+ +IL +R++ LGS + +LIILPVYS LP++MQTKIF P PP +RKVV+ATN
Sbjct: 724 TGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATN 783
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YVIDPGF KQ FN + GM+SL V PIS+A+A QR+G
Sbjct: 784 IAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSG 832
Score = 421 (153.3 bits), Expect = 2.9e-112, Sum P(2) = 2.9e-112
Identities = 79/188 (42%), Positives = 122/188 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+E + ++K K + E GDHL LLN+Y W ++ FS WC+EN
Sbjct: 954 MLSVQNVFYRPKEKQALADQKKAKFF---QPE--GDHLTLLNVYESWKNSKFSNPWCFEN 1008
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+Q RS++RA+DVR+QLI ++ R +++++S I+KAI +G+F + +K + YK
Sbjct: 1009 FVQARSLRRAQDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYK 1068
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P WV+YHELV TTKE+MR+V I+ KWL+E+AP ++K +
Sbjct: 1069 TLVEGQPVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSD 1128
Query: 1298 LEDSTNKK 1305
+ +K
Sbjct: 1129 PNKISKRK 1136
Score = 391 (142.7 bits), Expect = 2.4e-138, Sum P(3) = 2.4e-138
Identities = 79/148 (53%), Positives = 103/148 (69%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGC 720
+I+E ++SLPI+P ++ + AV +HQ+L++ GETGSGKTTQ+ QYL EAG+ + KIGC
Sbjct: 500 SIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGT-RGKIGC 558
Query: 721 TQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQP EE G +LG EVGYAIRFEDCTS TIIK+MTDG L RE L +P+
Sbjct: 559 TQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPN 618
Query: 781 LASYSVMIIDEAHPKVYVIDP--GFCKQ 806
L++YSV+I+DEAH + D G KQ
Sbjct: 619 LSAYSVIILDEAHERTISTDVLFGLLKQ 646
Score = 55 (24.4 bits), Expect = 2.4e-138, Sum P(3) = 2.4e-138
Identities = 14/65 (21%), Positives = 38/65 (58%)
Query: 596 HYEQRKWEDEQMSSAIFRVGAKDREHQEQYE-LLLDNQIDFIQA--LSLPGNRDKGEEEM 652
+Y++ +WE+ +++S + + + Q+ L + N++++ Q + +P + +K +EE+
Sbjct: 110 NYKESEWEETKLNSN------SNNQKKNQFPGLSIPNKVEWDQGKIVDVPIDDEKTKEEL 163
Query: 653 TEKQK 657
KQ+
Sbjct: 164 KRKQQ 168
Score = 48 (22.0 bits), Expect = 3.1e-102, Sum P(3) = 3.1e-102
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 649 EEEMTEK-QKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY 705
+E EK Q++ ++ K L + P+ + +A H I G G T+IP++
Sbjct: 426 KERKEEKNQQRNEMMDSIPKDLSL-PWHDPMPEAGERHLAQEIRSIAGQGIDTEIPEW 482
Score = 38 (18.4 bits), Expect = 7.4e-72, Sum P(2) = 7.4e-72
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNI 662
+F+QA SL +D ++ +T + KL+I
Sbjct: 1008 NFVQARSLRRAQDVRKQLITIMDRYKLDI 1036
Score = 37 (18.1 bits), Expect = 9.5e-72, Sum P(2) = 9.5e-72
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 612 FRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRD 646
F A ++ E Y+ L++ Q +I S NR+
Sbjct: 1054 FFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRN 1088
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 918 (328.2 bits), Expect = 1.3e-171, Sum P(2) = 1.3e-171
Identities = 175/331 (52%), Positives = 233/331 (70%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TGM+SL V PIS+A+A Q K +RLYT AY+ E+
Sbjct: 874 YVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEM 933
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL VL LK +GINDL+HFDF+D PP E+LV+ALEQL++L AL+ G
Sbjct: 934 LPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGL 993
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+P + KML+ S +C +EI+TI SMLSV +FYRPKDK AD
Sbjct: 994 LTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQN-VFYRPKDKQALADQK 1052
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENF+Q R++KR++DVR+QL+G++ R ++
Sbjct: 1053 KAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKL 1112
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++VS +V I+KAI +G+F + AK Y+T +Q V IHP+S+LF P WV+Y
Sbjct: 1113 DVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIY 1172
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
HELV TTKE+MR+VT I+ KWL+E AP +++
Sbjct: 1173 HELVQTTKEYMREVTTIDPKWLVEFAPSFFR 1203
Score = 772 (276.8 bits), Expect = 1.3e-171, Sum P(2) = 1.3e-171
Identities = 146/229 (63%), Positives = 187/229 (81%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E +L SYSV+++DEAHERT+HTD+LFGL+K V+ R +LKL+++SATL
Sbjct: 682 MTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATL 741
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F AP+F IPGR FPV++ YTK PE DY+DA +++++QIH +P GDIL+FL
Sbjct: 742 DAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFL 801
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P P +RKVV+ATN
Sbjct: 802 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATN 861
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TGM+SL V PIS+A+A QRAG
Sbjct: 862 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAG 910
Score = 429 (156.1 bits), Expect = 5.6e-114, Sum P(2) = 5.6e-114
Identities = 80/177 (45%), Positives = 122/177 (68%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K ++AE GDHL LL +YN W + FS WCYEN
Sbjct: 1032 MLSVQNVFYRPKDKQALADQKKAKF---NQAE--GDHLTLLAVYNSWKNNKFSNAWCYEN 1086
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+Q R++KR++DVR+QL+G++ R ++++VS +V I+KAI +G+F + AK Y+
Sbjct: 1087 FVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYR 1146
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
T +Q V IHP+S+LF P WV+YHELV TTKE+MR+VT I+ KWL+E AP +++
Sbjct: 1147 TLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFR 1203
Score = 402 (146.6 bits), Expect = 8.1e-136, Sum P(3) = 8.1e-136
Identities = 84/153 (54%), Positives = 102/153 (66%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G ++ + +K L + E ++SLPIY + DLI AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 565 GGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLG 624
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
E GFT + KIGCTQP EE G +LG EVGY IRFEDCTS TIIKYMT
Sbjct: 625 ECGFTA-RGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMT 683
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L E +L SYSV+++DEAH + D
Sbjct: 684 DGMLLRECLMEAELKSYSVIMLDEAHERTIHTD 716
Score = 57 (25.1 bits), Expect = 1.0e-74, Sum P(2) = 1.0e-74
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D+Q+ +I S NR
Sbjct: 1130 SGFFRNAAK-KDPQEGYRTLVDSQVVYIHPSSALFNR 1165
Score = 46 (21.3 bits), Expect = 8.1e-136, Sum P(3) = 8.1e-136
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
D D DR+ + S R + + +++ +T R+D+R
Sbjct: 228 DRDRDRRHKSS-SSRDHHERRRRSRSRSTERRDRR 261
Score = 41 (19.5 bits), Expect = 2.7e-135, Sum P(3) = 2.7e-135
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDD 71
R ++K +ISS LD + +F ++
Sbjct: 421 RWEIKQMISSGVLDRSEMPDFDEE 444
Score = 41 (19.5 bits), Expect = 2.7e-135, Sum P(3) = 2.7e-135
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 447 DSDDDRKER---DEFSERLKNRDKNNTKNVATSRQDKR 481
D D R+ R D S+R ++R ++ + + +D R
Sbjct: 181 DRDTKRRSRSREDRHSDRRRSRSRDKERRRRSRSRDNR 218
Score = 40 (19.1 bits), Expect = 3.5e-135, Sum P(3) = 3.5e-135
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 450 DDRKERDEFSERLK-NRDKNNTKNVATSRQDK 480
D R+ R ER + +R ++N + + SR+D+
Sbjct: 197 DRRRSRSRDKERRRRSRSRDNRRR-SRSREDR 227
Score = 40 (19.1 bits), Expect = 3.5e-135, Sum P(3) = 3.5e-135
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 604 DEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQAL 639
D+ ++ I + K+R + + LLDN +F +L
Sbjct: 28 DKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPDSL 63
Score = 40 (19.1 bits), Expect = 3.5e-135, Sum P(3) = 3.5e-135
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 433 KTPKVRAFMGHFLTDSDDDRKERDEFSERLKNR-DKNNTKNVATSRQD 479
K+ ++ F G L + +KE + E++K + +K++ + T D
Sbjct: 96 KSQLLKMFPGLALPNDTYSKKEESDDDEKVKAKPEKHSETHKKTDMSD 143
Score = 39 (18.8 bits), Expect = 1.3e-97, Sum P(3) = 1.3e-97
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 639 LSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLI-IEGETG 695
L+L GN +G+E E +K+ I ++ + KQ + V D + + ETG
Sbjct: 395 LNLQGNGMEGDEH--ESRKRVTRISSPER----WEIKQMISSGVLDRSEMPDFDEETG 446
Score = 37 (18.1 bits), Expect = 7.2e-135, Sum P(3) = 7.2e-135
Identities = 7/34 (20%), Positives = 18/34 (52%)
Query: 448 SDDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
S D+R+ +R ++RD+ + + + ++R
Sbjct: 214 SRDNRRRSRSREDRDRDRDRRHKSSSSRDHHERR 247
Score = 37 (18.1 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 85 DIYYTKAPEADYIDACVVSILQIHATQPLGD 115
D+ + +A +++ V+++ Q+H+ L D
Sbjct: 960 DLLHFDFMDAPPVESLVMALEQLHSLSALDD 990
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 939 (335.6 bits), Expect = 1.6e-171, Sum P(2) = 1.6e-171
Identities = 179/353 (50%), Positives = 244/353 (69%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQN +N + G+ESL + PIS+ASA Q KC+RLYT AY++E+
Sbjct: 803 YVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM 862
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
++PEIQRINLG L +KA+GINDL+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 863 PPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGL 922
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGR+MAEFPL+P + KMLLAS C +EI+T+ +M+ G IFYRP++K AD
Sbjct: 923 LTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQT-GNIFYRPREKQAQADQK 981
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
R FF GDHL LL +Y W +FS WC+ENFIQ RS++RA+DVR+QL+ ++ + ++
Sbjct: 982 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKL 1041
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
++V+ IRKAITAG+F+H A+ Y+T NQ V IHP+S+LF+ P WV+Y
Sbjct: 1042 DVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1101
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
H+LV TTKE+MR+VT I+ KWL+E+AP ++K + D T KM K + R E
Sbjct: 1102 HDLVMTTKEYMREVTVIDPKWLVELAPRFFK---VSDPT--KMSKRKRQERIE 1149
Score = 750 (269.1 bits), Expect = 1.6e-171, Sum P(2) = 1.6e-171
Identities = 140/229 (61%), Positives = 185/229 (80%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L + +L+ YSV+++DEAHERT+HTD+LFGL+K +++ R DL+L+++SATL
Sbjct: 611 MTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATL 670
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS +F + +F IPGR FPV+I YTK PE DY+DA ++++LQIH T+P GDILVFL
Sbjct: 671 DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFL 730
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI++ + L +R++ LG + ELIILPVYS LP++MQ++IF P PP RKVV+ATN
Sbjct: 731 TGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATN 790
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAE SLTID I YV+DPGF KQN +N + G+ESL + PIS+ASA QRAG
Sbjct: 791 IAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAG 839
Score = 439 (159.6 bits), Expect = 8.6e-113, Sum P(2) = 8.6e-113
Identities = 86/199 (43%), Positives = 129/199 (64%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+++ +Y+PRE + ++K K + E GDHL LL +Y W +FS WC+EN
Sbjct: 961 MIQTGNIFYRPREKQAQADQKRAKFF---QPE--GDHLTLLAVYEAWKAKNFSGPWCFEN 1015
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+DVR+QL+ ++ + ++++V+ IRKAITAG+F+H A+ Y+
Sbjct: 1016 FIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYR 1075
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T NQ V IHP+S+LF+ P WV+YH+LV TTKE+MR+VT I+ KWL+E+AP ++K
Sbjct: 1076 TLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFK--- 1132
Query: 1298 LEDSTNKKMPKTLGKSRAE 1316
+ D T KM K + R E
Sbjct: 1133 VSDPT--KMSKRKRQERIE 1149
Score = 416 (151.5 bits), Expect = 6.3e-140, Sum P(3) = 6.3e-140
Identities = 86/166 (51%), Positives = 111/166 (66%)
Query: 636 IQALSLPG-NRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
+ A +P +D + T Q+ KL+I+E ++SLPIY K++LI AV D+QVL++ GET
Sbjct: 481 LSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGET 540
Query: 695 GSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFE 754
GSGKTTQ+ QYL EAG+T K KIGCTQP EE G +LG EVGYAIRFE
Sbjct: 541 GSGKTTQVTQYLAEAGYTT-KGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 599
Query: 755 DCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DCT T+IKYMTDG L RE L + +L+ YSV+++DEAH + D
Sbjct: 600 DCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTD 645
Score = 50 (22.7 bits), Expect = 6.3e-140, Sum P(3) = 6.3e-140
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATSRQDKR 481
D D DR ++RD+ +R ++R++N R+ R
Sbjct: 139 DRDRDRNRDRDDRRDRHRDRERNRGDEEGEDRRSDR 174
Score = 48 (22.0 bits), Expect = 1.0e-139, Sum P(3) = 1.0e-139
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
D DR+E +R +NRD+++ ++ R+ R
Sbjct: 130 DRDRRESGRDRDRDRNRDRDDRRDRHRDRERNR 162
Score = 44 (20.5 bits), Expect = 2.7e-139, Sum P(3) = 2.7e-139
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 424 PCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERD-----EFSERLKNRDKNNTKNVATSRQ 478
P P K + + F G + D+ D KE + E ER + D+N ++ S +
Sbjct: 79 PKPKSEKKKEEGDDQKFKGLAIKDTKDKVKELEKEIEREAEERRREEDRNRDRDRRESGR 138
Query: 479 DK 480
D+
Sbjct: 139 DR 140
Score = 42 (19.8 bits), Expect = 6.6e-71, Sum P(2) = 6.6e-71
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 607 MSSAIFRVGAKDREHQEQYELLLDNQIDFIQALS 640
+++ F GA+ ++ QE Y L++NQ +I S
Sbjct: 1057 ITAGFFFHGAR-KDPQEGYRTLVENQPVYIHPSS 1089
Score = 38 (18.4 bits), Expect = 6.3e-100, Sum P(3) = 6.3e-100
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 617 KDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETK 666
+DRE E D + D G+ +GE+ +++ K +EE K
Sbjct: 156 RDRERNRGDEEGEDRRSDRRHRERGRGDGGEGEDRRRDRRAKDEYVEEDK 205
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 881 (315.2 bits), Expect = 8.2e-165, Sum P(2) = 8.2e-165
Identities = 169/339 (49%), Positives = 232/339 (68%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +N ++GM+SL V PIS+A+A Q KC+RLYT A++ E+
Sbjct: 828 YVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEM 887
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + +L LKA+GIN+LI FDF+D PP ++++ AL L+ L AL+ G
Sbjct: 888 LPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL 947
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGRRMAEFPL+P + K+L+ S C EE++TI +ML+V IFYRPK+K HAD
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQK 1006
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WC+ENFIQ RSMKRA+D+R+QL+G++ R ++
Sbjct: 1007 KAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKL 1066
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
+VS + ++KAI +G+F + AK Y+T Q V IHP+S+ F++ P WV+Y
Sbjct: 1067 LMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVY 1126
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST 1135
HELV TTKE+MR+VT I+ KWL+E AP ++K + DST
Sbjct: 1127 HELVMTTKEYMREVTAIDPKWLVEFAPSFFK---IGDST 1162
Score = 755 (270.8 bits), Expect = 8.2e-165, Sum P(2) = 8.2e-165
Identities = 140/229 (61%), Positives = 186/229 (81%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL+ YS++++DEAHERT+HTD+LFGL+K R R +LKL+I+SATL
Sbjct: 636 MTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATL 695
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D+ KFSE+F +AP+F IPGR FPV+I YT+ PE+DY++A ++++QIH T+P GD+LVFL
Sbjct: 696 DSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFL 755
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T E+L +R++ +G + ELIILPVY LP++MQT+IF P P RKVV+ATN
Sbjct: 756 TGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATN 815
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +N ++GM+SL V PIS+A+A QR+G
Sbjct: 816 IAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSG 864
Score = 433 (157.5 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 84/185 (45%), Positives = 123/185 (66%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+E +D ++K K + E GDHL LL +YN W + FS WC+EN
Sbjct: 986 MLNVQNIFYRPKEKQDHADQKKAKF---HQPE--GDHLTLLAVYNSWKNHHFSQPWCFEN 1040
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RSMKRA+D+R+QL+G++ R ++ +VS + ++KAI +G+F + AK Y+
Sbjct: 1041 FIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYR 1100
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+ F++ P WV+YHELV TTKE+MR+VT I+ KWL+E AP ++K
Sbjct: 1101 TLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFK--- 1157
Query: 1298 LEDST 1302
+ DST
Sbjct: 1158 IGDST 1162
Score = 381 (139.2 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 75/148 (50%), Positives = 103/148 (69%)
Query: 653 TEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
T ++ L++ E ++SLPI+ K++L++A+ D+Q+L++ GETGSGKTTQ+ QY EAG
Sbjct: 524 TYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLG 583
Query: 713 KDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
+ + KIGCTQP EE G KLG +VGY IRFEDCTS+ TIIKYMTDG L
Sbjct: 584 R-RGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLL 642
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVID 800
RE L +PDL+ YS++++DEAH + D
Sbjct: 643 RECLIDPDLSGYSLIMLDEAHERTIHTD 670
Score = 47 (21.6 bits), Expect = 7.4e-72, Sum P(2) = 7.4e-72
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALS 640
S FR AK R+ QE Y L D Q +I S
Sbjct: 1084 SGFFRNAAK-RDPQEGYRTLTDGQNVYIHPSS 1114
Score = 45 (20.9 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1285 LLEVAPHYYKPRELEDSTNKKMPK 1308
+L V +Y+P+E +D ++K K
Sbjct: 986 MLNVQNIFYRPKEKQDHADQKKAK 1009
Score = 40 (19.1 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 449 DDDRKERDEFSERLKNRDKNNT-KNVATSRQDKR 481
D DR+ R E ++RD+ + ++ R D+R
Sbjct: 175 DRDRRRRSRSREDRRDRDRRDRDRDRDRGRGDRR 208
Score = 40 (19.1 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 448 SDDDRKERDEFSERLKNRDKNNTKNVATSRQ----DKR 481
S +DR++RD +R ++RD+ RQ D+R
Sbjct: 184 SREDRRDRDR-RDRDRDRDRGRGDRRGDDRQRDRRDRR 220
Score = 38 (18.4 bits), Expect = 3.3e-127, Sum P(3) = 3.3e-127
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 501 IPKLRIESRRKYLEKRKEDKVAELE 525
+P L + + K E ++D +A+LE
Sbjct: 110 LPALAMANTAKEKEDNEDDLMAQLE 134
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 881 (315.2 bits), Expect = 8.2e-165, Sum P(2) = 8.2e-165
Identities = 169/339 (49%), Positives = 232/339 (68%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +N ++GM+SL V PIS+A+A Q KC+RLYT A++ E+
Sbjct: 828 YVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEM 887
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + +L LKA+GIN+LI FDF+D PP ++++ AL L+ L AL+ G
Sbjct: 888 LPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL 947
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLGRRMAEFPL+P + K+L+ S C EE++TI +ML+V IFYRPK+K HAD
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQK 1006
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WC+ENFIQ RSMKRA+D+R+QL+G++ R ++
Sbjct: 1007 KAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKL 1066
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
+VS + ++KAI +G+F + AK Y+T Q V IHP+S+ F++ P WV+Y
Sbjct: 1067 LMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVY 1126
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST 1135
HELV TTKE+MR+VT I+ KWL+E AP ++K + DST
Sbjct: 1127 HELVMTTKEYMREVTAIDPKWLVEFAPSFFK---IGDST 1162
Score = 755 (270.8 bits), Expect = 8.2e-165, Sum P(2) = 8.2e-165
Identities = 140/229 (61%), Positives = 186/229 (81%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL+ YS++++DEAHERT+HTD+LFGL+K R R +LKL+I+SATL
Sbjct: 636 MTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATL 695
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D+ KFSE+F +AP+F IPGR FPV+I YT+ PE+DY++A ++++QIH T+P GD+LVFL
Sbjct: 696 DSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFL 755
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T E+L +R++ +G + ELIILPVY LP++MQT+IF P P RKVV+ATN
Sbjct: 756 TGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATN 815
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +N ++GM+SL V PIS+A+A QR+G
Sbjct: 816 IAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSG 864
Score = 433 (157.5 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 84/185 (45%), Positives = 123/185 (66%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+E +D ++K K + E GDHL LL +YN W + FS WC+EN
Sbjct: 986 MLNVQNIFYRPKEKQDHADQKKAKF---HQPE--GDHLTLLAVYNSWKNHHFSQPWCFEN 1040
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RSMKRA+D+R+QL+G++ R ++ +VS + ++KAI +G+F + AK Y+
Sbjct: 1041 FIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYR 1100
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+ F++ P WV+YHELV TTKE+MR+VT I+ KWL+E AP ++K
Sbjct: 1101 TLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFK--- 1157
Query: 1298 LEDST 1302
+ DST
Sbjct: 1158 IGDST 1162
Score = 381 (139.2 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 75/148 (50%), Positives = 103/148 (69%)
Query: 653 TEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
T ++ L++ E ++SLPI+ K++L++A+ D+Q+L++ GETGSGKTTQ+ QY EAG
Sbjct: 524 TYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLG 583
Query: 713 KDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
+ + KIGCTQP EE G KLG +VGY IRFEDCTS+ TIIKYMTDG L
Sbjct: 584 R-RGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLL 642
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVID 800
RE L +PDL+ YS++++DEAH + D
Sbjct: 643 RECLIDPDLSGYSLIMLDEAHERTIHTD 670
Score = 47 (21.6 bits), Expect = 7.4e-72, Sum P(2) = 7.4e-72
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALS 640
S FR AK R+ QE Y L D Q +I S
Sbjct: 1084 SGFFRNAAK-RDPQEGYRTLTDGQNVYIHPSS 1114
Score = 45 (20.9 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1285 LLEVAPHYYKPRELEDSTNKKMPK 1308
+L V +Y+P+E +D ++K K
Sbjct: 986 MLNVQNIFYRPKEKQDHADQKKAK 1009
Score = 40 (19.1 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 449 DDDRKERDEFSERLKNRDKNNT-KNVATSRQDKR 481
D DR+ R E ++RD+ + ++ R D+R
Sbjct: 175 DRDRRRRSRSREDRRDRDRRDRDRDRDRGRGDRR 208
Score = 40 (19.1 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 448 SDDDRKERDEFSERLKNRDKNNTKNVATSRQ----DKR 481
S +DR++RD +R ++RD+ RQ D+R
Sbjct: 184 SREDRRDRDR-RDRDRDRDRGRGDRRGDDRQRDRRDRR 220
Score = 38 (18.4 bits), Expect = 3.3e-127, Sum P(3) = 3.3e-127
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 501 IPKLRIESRRKYLEKRKEDKVAELE 525
+P L + + K E ++D +A+LE
Sbjct: 110 LPALAMANTAKEKEDNEDDLMAQLE 134
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 845 (302.5 bits), Expect = 3.4e-155, Sum P(2) = 3.4e-155
Identities = 162/342 (47%), Positives = 229/342 (66%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF K N +N+R G+E L V PIS+A ANQ KC+RLYT A+ +E+
Sbjct: 771 YVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEM 830
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+NTVPEIQR NL + +LMLKA+GINDL+ FDF+DPPP ++ AL +LY L +L+ G
Sbjct: 831 LENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGK 890
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT LG+ M+ FP+DP + + LL+S +C +EIVTI SMLSV +FYRPKD+ + AD+
Sbjct: 891 LTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQN-VFYRPKDRQLEADSK 949
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LLN+Y +W A++S Q+C NF+ R +KRARDV+ Q+ + +++ +
Sbjct: 950 KAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGL 1009
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
+L+S ++ IRK +G+F + AK YKT V IHP+SSL+ + +V+Y
Sbjct: 1010 KLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMY 1069
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1138
H +V T++E+M QVT IE +WLLEVAPH+YK + E + KK
Sbjct: 1070 HSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKK 1111
Score = 696 (250.1 bits), Expect = 3.4e-155, Sum P(2) = 3.4e-155
Identities = 131/229 (57%), Positives = 177/229 (77%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +P+++ YSV+++DEAHERT+ TD+LF L+K R +LK++++SATL
Sbjct: 579 MTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATL 638
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
++ KFSE+F + P+ IPG+ FPV++ Y++ P+ DYI+A + ++ IH + GDILVFL
Sbjct: 639 NSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFL 698
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI++C EIL DRV+ LG I EL+ILPVYS LP+++Q+KIF PTP +RKVV ATN
Sbjct: 699 TGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATN 758
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETS+TID I YV+DPGF K N +N+R G+E L V PIS+A ANQR G
Sbjct: 759 IAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKG 807
Score = 388 (141.6 bits), Expect = 1.2e-122, Sum P(2) = 1.2e-122
Identities = 88/242 (36%), Positives = 134/242 (55%)
Query: 563 KARELEKVQRYYMPKGTKGPXX----XXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGAKD 618
K ++++ ++Y MPK TK P H E++ + ++ I + + D
Sbjct: 373 KDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAIRDHREEKLRKKREIEQQIRKQQSFD 432
Query: 619 REHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDL 678
+ + + + Q+ Q + +++ E ++ ++ L I +++LP+Y + +L
Sbjct: 433 DPTKNKKDSRNEIQMLKNQLIVTEWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSEL 492
Query: 679 IDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEE 738
I AVRD+Q L+I GETGSGKTTQI QYL E GF+ M IGCTQP EE
Sbjct: 493 IQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGM-IGCTQPRRVAAVSVAKRVAEE 551
Query: 739 MGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYV 798
+G K+G +VGY IRFED T T IKYMTDG L RE L +P+++ YSV+++DEAH +
Sbjct: 552 VGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVA 611
Query: 799 ID 800
D
Sbjct: 612 TD 613
Score = 372 (136.0 bits), Expect = 1.7e-99, Sum P(2) = 1.7e-99
Identities = 73/188 (38%), Positives = 114/188 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + + K K GDHL LLN+Y +W A++S Q+C N
Sbjct: 929 MLSVQNVFYRPKDRQLEADSKKAKFHHPY-----GDHLTLLNVYTRWQQANYSEQYCKTN 983
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ R +KRARDV+ Q+ + +++ ++L+S ++ IRK +G+F + AK YK
Sbjct: 984 FLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYK 1043
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T V IHP+SSL+ + +V+YH +V T++E+M QVT IE +WLLEVAPH+YK +
Sbjct: 1044 TINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGD 1103
Query: 1298 LEDSTNKK 1305
E + KK
Sbjct: 1104 AESQSRKK 1111
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 796 (285.3 bits), Expect = 9.1e-155, Sum P(2) = 9.1e-155
Identities = 154/295 (52%), Positives = 201/295 (68%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ +NS+TG++ L V PIS+A A Q KC+RLYT AY+ E+
Sbjct: 853 YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM 912
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEIQR NL + VL LKA+GINDL+ FDF+D PP ETL+ A+EQLY LGAL+ G
Sbjct: 913 LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL 972
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LGRRMAEFPL+PM+ KML+ S C EE++TI SMLSV +FYRPKDK AD
Sbjct: 973 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQK 1031
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F GDHL LL +YN W + FS WCYENFIQ RS++RA+D+R+Q++G++ R ++
Sbjct: 1032 KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKL 1091
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1091
++VS TV ++KAI +G+F + AK Y+T Q V IHP+S+LF P
Sbjct: 1092 DVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQP 1146
Score = 784 (281.0 bits), Expect = 9.1e-155, Sum P(2) = 9.1e-155
Identities = 145/229 (63%), Positives = 188/229 (82%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 661 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 720
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P GDILVFL
Sbjct: 721 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL 780
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP++MQT+IF P PP +RKVV+ATN
Sbjct: 781 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN 840
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ +NS+TG++ L V PIS+A A QRAG
Sbjct: 841 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 889
Score = 402 (146.6 bits), Expect = 7.8e-117, Sum P(3) = 7.8e-117
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +++I E ++SLPIY K+ L+ AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 544 GGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA 603
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 604 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 662
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 663 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 695
Score = 292 (107.8 bits), Expect = 2.7e-101, Sum P(2) = 2.7e-101
Identities = 57/141 (40%), Positives = 89/141 (63%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P++ + ++K K + E GDHL LL +YN W + FS WCYEN
Sbjct: 1011 MLSVQNVFYRPKDKQALADQKKAKF---HQTE--GDHLTLLAVYNSWKNNKFSNPWCYEN 1065
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ RS++RA+D+R+Q++G++ R ++++VS TV ++KAI +G+F + AK Y+
Sbjct: 1066 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1125
Query: 1238 TAKHNQTVMIHPNSSLFEELP 1258
T Q V IHP+S+LF P
Sbjct: 1126 TLIDQQVVYIHPSSALFNRQP 1146
Score = 62 (26.9 bits), Expect = 7.8e-117, Sum P(3) = 7.8e-117
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSR---QDKRXXXXXXXXXXXXXXSRDKIIPKLR 505
D + ++R + +R ++RD+N ++ R +D + R+K+ + R
Sbjct: 164 DAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYR 223
Query: 506 IESRRKYLEK-RKE-DKVAELEADILDDEYL 534
SR + K RK+ DK E D D+++
Sbjct: 224 SRSRSQSPPKDRKDRDKYGERNLDRWRDKHV 254
Score = 59 (25.8 bits), Expect = 1.6e-116, Sum P(3) = 1.6e-116
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 448 SDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIE 507
S D ++RD ER ++RD + ++ + SR R SR + PK R +
Sbjct: 179 SRDRNRDRDRDRERNRDRD-HKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDR-K 236
Query: 508 SRRKYLEKRKEDKVAELEAD 527
R KY E R D+ + D
Sbjct: 237 DRDKYGE-RNLDRWRDKHVD 255
Score = 57 (25.1 bits), Expect = 1.7e-76, Sum P(2) = 1.7e-76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 609 SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR 645
S FR AK ++ QE Y L+D Q+ +I S NR
Sbjct: 1109 SGFFRNAAK-KDPQEGYRTLIDQQVVYIHPSSALFNR 1144
Score = 47 (21.6 bits), Expect = 3.0e-115, Sum P(3) = 3.0e-115
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSR 477
D D R+ R R + R++N K+ SR
Sbjct: 195 DRDHKRRHRSRSRSRSRTRERNKVKSRYRSR 225
Score = 38 (18.4 bits), Expect = 2.6e-114, Sum P(3) = 2.6e-114
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 158 TDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDP 197
T+ +T + P P +V A + + SL + + DP
Sbjct: 358 TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDP 397
Score = 37 (18.1 bits), Expect = 2.1e-74, Sum P(2) = 2.1e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 634 DFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKS 668
+FIQA SL +D ++ + + KL++ KS
Sbjct: 1065 NFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS 1099
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 874 (312.7 bits), Expect = 1.4e-154, Sum P(2) = 1.4e-154
Identities = 166/339 (48%), Positives = 235/339 (69%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+VIDPGFCK ++S+ M+SL V PISKA+A Q KC+RLYT AYK+E+
Sbjct: 920 FVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEM 979
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ +VPEIQRINLG+ VL+LKALGIND +HFDF+D P ETL+ +LE LY LGAL+ +G
Sbjct: 980 SEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGY 1039
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLG++MA FP++P + K+LL S + C +++VTI SMLSV IFYRP++K + AD
Sbjct: 1040 LTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQNKALLADKK 1098
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F M GD + LNIYN+W + FS WC+ENFIQ R++KRA+DVR+Q++ + ++
Sbjct: 1099 KNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNY 1158
Query: 1037 ELV-----SNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1091
++ ++ T+ VNI K+I +GYF H+ K Y T NQ V IHP+S+LF + P
Sbjct: 1159 QVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKNP 1218
Query: 1092 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1130
+V+YHELV T KE++R T I+ +WL+++AP+ + P +
Sbjct: 1219 LFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPAD 1257
Score = 693 (249.0 bits), Expect = 1.4e-154, Sum P(2) = 1.4e-154
Identities = 134/230 (58%), Positives = 179/230 (77%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE LS+ L YS +I+DEAHERT+ TDILF L+KD+VR R+D KL+++SATL
Sbjct: 727 LTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATL 786
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS +F ++P+F IPG+ FPV+I ++K PE+DY++A ++++L IH + GDILVFL
Sbjct: 787 DAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFL 846
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKE-LIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
TGQ+EI T EIL +R+++L S LIILP+YS+LP++MQ+ IF P PP RK +LAT
Sbjct: 847 TGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILAT 906
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
NIAE SLTID I +VIDPGFCK ++S+ M+SL V PISKA+A QRAG
Sbjct: 907 NIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAG 956
Score = 386 (140.9 bits), Expect = 1.0e-124, Sum P(3) = 1.0e-124
Identities = 80/148 (54%), Positives = 95/148 (64%)
Query: 657 KKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKM 716
K L I E + LPIY K DL+ A+ + VLI+ GETGSGKTTQIPQYLHEA +T +K
Sbjct: 619 KNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYT-EKG 677
Query: 717 KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
+GCTQP EE G LG EVGY+IRF+DCTS TIIKY+TDG L RE L
Sbjct: 678 IVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETL 737
Query: 777 SEPDLASYSVMIIDEAHPKVYVIDPGFC 804
S+ L YS +I+DEAH + D FC
Sbjct: 738 SDTLLTKYSFIILDEAHERTISTDILFC 765
Score = 362 (132.5 bits), Expect = 1.2e-97, Sum P(2) = 1.2e-97
Identities = 72/185 (38%), Positives = 114/185 (61%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ +KK K + GD + LNIYN+W + FS WC+EN
Sbjct: 1078 MLSVQNIFYRPQNKALLADKKKNKFIMPQ-----GDLITYLNIYNKWKENSFSNYWCHEN 1132
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELV-----SNPTETVNIRKAITAGYFYHIAKLSK 1232
FIQ R++KRA+DVR+Q++ + ++ ++ ++ T+ VNI K+I +GYF H+ K
Sbjct: 1133 FIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDT 1192
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
Y T NQ V IHP+S+LF + P +V+YHELV T KE++R T I+ +WL+++AP+
Sbjct: 1193 QQGYTTLLTNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNL 1252
Query: 1293 YKPRE 1297
+ P +
Sbjct: 1253 FIPAD 1257
Score = 58 (25.5 bits), Expect = 1.0e-124, Sum P(3) = 1.0e-124
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 628 LLDNQIDFIQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSL 669
L+D+ + + S+ G ++K E E+T KQKK +I T + L
Sbjct: 130 LVDSDENDKKEKSIKGTKEKKESIEITSKQKKNSDINVTTRDL 172
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 874 (312.7 bits), Expect = 1.4e-154, Sum P(2) = 1.4e-154
Identities = 166/339 (48%), Positives = 235/339 (69%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+VIDPGFCK ++S+ M+SL V PISKA+A Q KC+RLYT AYK+E+
Sbjct: 920 FVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEM 979
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ +VPEIQRINLG+ VL+LKALGIND +HFDF+D P ETL+ +LE LY LGAL+ +G
Sbjct: 980 SEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGY 1039
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTKLG++MA FP++P + K+LL S + C +++VTI SMLSV IFYRP++K + AD
Sbjct: 1040 LTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQNKALLADKK 1098
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ F M GD + LNIYN+W + FS WC+ENFIQ R++KRA+DVR+Q++ + ++
Sbjct: 1099 KNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNY 1158
Query: 1037 ELV-----SNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1091
++ ++ T+ VNI K+I +GYF H+ K Y T NQ V IHP+S+LF + P
Sbjct: 1159 QVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKNP 1218
Query: 1092 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1130
+V+YHELV T KE++R T I+ +WL+++AP+ + P +
Sbjct: 1219 LFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPAD 1257
Score = 693 (249.0 bits), Expect = 1.4e-154, Sum P(2) = 1.4e-154
Identities = 134/230 (58%), Positives = 179/230 (77%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE LS+ L YS +I+DEAHERT+ TDILF L+KD+VR R+D KL+++SATL
Sbjct: 727 LTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATL 786
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KFS +F ++P+F IPG+ FPV+I ++K PE+DY++A ++++L IH + GDILVFL
Sbjct: 787 DAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFL 846
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKE-LIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
TGQ+EI T EIL +R+++L S LIILP+YS+LP++MQ+ IF P PP RK +LAT
Sbjct: 847 TGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILAT 906
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
NIAE SLTID I +VIDPGFCK ++S+ M+SL V PISKA+A QRAG
Sbjct: 907 NIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAG 956
Score = 386 (140.9 bits), Expect = 1.0e-124, Sum P(3) = 1.0e-124
Identities = 80/148 (54%), Positives = 95/148 (64%)
Query: 657 KKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKM 716
K L I E + LPIY K DL+ A+ + VLI+ GETGSGKTTQIPQYLHEA +T +K
Sbjct: 619 KNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYT-EKG 677
Query: 717 KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
+GCTQP EE G LG EVGY+IRF+DCTS TIIKY+TDG L RE L
Sbjct: 678 IVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETL 737
Query: 777 SEPDLASYSVMIIDEAHPKVYVIDPGFC 804
S+ L YS +I+DEAH + D FC
Sbjct: 738 SDTLLTKYSFIILDEAHERTISTDILFC 765
Score = 362 (132.5 bits), Expect = 1.2e-97, Sum P(2) = 1.2e-97
Identities = 72/185 (38%), Positives = 114/185 (61%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ +KK K + GD + LNIYN+W + FS WC+EN
Sbjct: 1078 MLSVQNIFYRPQNKALLADKKKNKFIMPQ-----GDLITYLNIYNKWKENSFSNYWCHEN 1132
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELV-----SNPTETVNIRKAITAGYFYHIAKLSK 1232
FIQ R++KRA+DVR+Q++ + ++ ++ ++ T+ VNI K+I +GYF H+ K
Sbjct: 1133 FIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDT 1192
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
Y T NQ V IHP+S+LF + P +V+YHELV T KE++R T I+ +WL+++AP+
Sbjct: 1193 QQGYTTLLTNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNL 1252
Query: 1293 YKPRE 1297
+ P +
Sbjct: 1253 FIPAD 1257
Score = 58 (25.5 bits), Expect = 1.0e-124, Sum P(3) = 1.0e-124
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 628 LLDNQIDFIQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSL 669
L+D+ + + S+ G ++K E E+T KQKK +I T + L
Sbjct: 130 LVDSDENDKKEKSIKGTKEKKESIEITSKQKKNSDINVTTRDL 172
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 809 (289.8 bits), Expect = 1.7e-151, Sum P(2) = 1.7e-151
Identities = 163/349 (46%), Positives = 226/349 (64%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+DPGF KQ+ F+ + GM+SL V PIS+A A Q KC+RLYT AY++E+
Sbjct: 799 YVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEM 858
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ +PEIQR NL + +LMLKA+GINDL++FDF+DPPP +T++ AL+ LYAL AL+ G
Sbjct: 859 LPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGL 918
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT LGR+MA+FP++P + K+L+ S + C EE+++I +MLSV I+ RP++K AD
Sbjct: 919 LTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREKQQEADRQ 977
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
R F DHL LLN+Y W S WCYE++IQ R M+RA DVR+QLI L+ R
Sbjct: 978 RAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRH 1037
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKL-SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVL 1095
+VS + I +A+ +GYF ++AK S G YKT N V +HP+ LF + WV+
Sbjct: 1038 PVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVI 1097
Query: 1096 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELED-STNKKMPKTL 1143
YHEL+ T+KE+M V+ + KWL+EVAP ++K S KK K L
Sbjct: 1098 YHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKVL 1146
Score = 736 (264.1 bits), Expect = 1.7e-151, Sum P(2) = 1.7e-151
Identities = 141/229 (61%), Positives = 182/229 (79%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +P L+ YSV+I+DEAHERT+ TD+LFGL+K V R DLKL+++SATL
Sbjct: 607 MTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATL 666
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA++FS +F P+F IPGR +PV+I YTK PEADY+DA +++++QIH ++ GDILVFL
Sbjct: 667 DAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFL 726
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R + LG I EL+ILPVYS LP+++Q++IF P PP RKVV+ATN
Sbjct: 727 TGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATN 786
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLTID I YV+DPGF KQ+ F+ + GM+SL V PIS+A A QR+G
Sbjct: 787 IAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSG 835
Score = 365 (133.5 bits), Expect = 4.9e-113, Sum P(3) = 4.9e-113
Identities = 70/145 (48%), Positives = 96/145 (66%)
Query: 656 QKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK 715
++ L+++E ++ LP++ ++ ++AV +Q+L++ GETGSGKTTQI QYL E G+T D
Sbjct: 497 KRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDS 556
Query: 716 MKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREF 775
IGCTQP EE+G ++G EVGY IRFED TS T IKYMTDG L RE
Sbjct: 557 KMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQREC 616
Query: 776 LSEPDLASYSVMIIDEAHPKVYVID 800
L +P L+ YSV+I+DEAH + D
Sbjct: 617 LVDPLLSKYSVIILDEAHERTVATD 641
Score = 348 (127.6 bits), Expect = 1.6e-101, Sum P(2) = 1.6e-101
Identities = 77/195 (39%), Positives = 110/195 (56%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V + +PRE + +++ + A DHL LLN+Y W S WCYE+
Sbjct: 957 MLSVPNIWSRPREKQQEADRQRAQF-----ANPESDHLTLLNVYTTWKMNRCSDNWCYEH 1011
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKL-SKSGSY 1236
+IQ R M+RA DVR+QLI L+ R +VS + I +A+ +GYF ++AK S G Y
Sbjct: 1012 YIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCY 1071
Query: 1237 KTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPR 1296
KT N V +HP+ LF + WV+YHEL+ T+KE+M V+ + KWL+EVAP ++K
Sbjct: 1072 KTIVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFA 1131
Query: 1297 ELED-STNKKMPKTL 1310
S KK K L
Sbjct: 1132 NANQVSKTKKNLKVL 1146
Score = 48 (22.0 bits), Expect = 2.1e-79, Sum P(3) = 2.1e-79
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 647 KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
K E+EM EKQ L+ ++T + F QD VRD + ET S
Sbjct: 439 KSEQEM-EKQDLSLSWQDTMSNPQDRKFAQD----VRDSAARQLTSETPS 483
Score = 44 (20.5 bits), Expect = 4.9e-113, Sum P(3) = 4.9e-113
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 427 SCLKVFKTPK---VRAFM-GHFLTDSDDDRKERDEFSERLKNRDKNNTKNVATSRQD 479
S +KV K P RA M G L + DR+E + +LK+ + ++++ S QD
Sbjct: 402 SPIKVVKAPDGSLSRAAMQGQILAN---DRREIRQKEAKLKSEQEMEKQDLSLSWQD 455
Score = 44 (20.5 bits), Expect = 7.8e-26, Sum P(3) = 7.8e-26
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 1041 NPTETV--NIRKAITAGYFYHIAKLSKSGS 1068
NP ET N RK +T+ + + +L+ SG+
Sbjct: 321 NPLETFTSNGRKRLTSPEIWELQQLAASGA 350
Score = 43 (20.2 bits), Expect = 7.0e-79, Sum P(3) = 7.0e-79
Identities = 15/76 (19%), Positives = 33/76 (43%)
Query: 628 LLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQV 687
L+DN +D ++ LS + + + ++ LN ++ I P + H
Sbjct: 131 LMDNAMDELEELSTLAKTRRNDRDSRRDERHYLNGIRERRERSISP-------SFSHHSR 183
Query: 688 LIIEGETGSGKTTQIP 703
I G++ S ++++ P
Sbjct: 184 TSISGQSHSSRSSRGP 199
Score = 41 (19.5 bits), Expect = 2.1e-79, Sum P(3) = 2.1e-79
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 749 YAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
Y++ D ERT+ + G L L PDL
Sbjct: 625 YSVIILDEAHERTVATDVLFGLLKGTVLKRPDL 657
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 833 (298.3 bits), Expect = 9.6e-150, Sum P(2) = 9.6e-150
Identities = 167/356 (46%), Positives = 231/356 (64%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVIDPGF KQ +N R +ESL V PISKASA+Q KCFRLYT ++ ++
Sbjct: 361 VYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNND 420
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L+ T PEI R NL N VL LK LGI+DL+HFDF+DPP ETL+ ALE L LGAL+ G
Sbjct: 421 LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDG 480
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LTK G M+EFPLDP M KML+ S ++ C EI+++++MLSV F RP++ AD
Sbjct: 481 NLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNC-FIRPREAQKAADE 539
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
A+ F + GDHL LLN+Y+ + + WCYENFI +R+MK A +VR+QL+ ++ R
Sbjct: 540 AKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFN 599
Query: 1036 MELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1091
+++ S + +NIRKA+ AGYF +A L ++G Y T K NQ V +HP++ L + P
Sbjct: 600 LKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKP 658
Query: 1092 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1147
WV+Y+E V T++ F+R VT+I +WL++VA HYY + K++ + L K R
Sbjct: 659 EWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRVIEKLYKKR 714
Score = 658 (236.7 bits), Expect = 9.6e-150, Sum P(2) = 9.6e-150
Identities = 132/249 (53%), Positives = 181/249 (72%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +++P L Y V+I+DEAHERTL TD+LFGL+K++++ R DLKL++ SATL
Sbjct: 163 LTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL 222
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A+KF ++F AP+ ++PGR PV+I+YT+ PE DY++A + +++QIH +P GDILVFL
Sbjct: 223 EAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFL 282
Query: 121 TGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP-------PNA 172
TG+EEIE C +I ++ V LG ++ + ++P+YS LP MQ KIF P P P
Sbjct: 283 TGEEEIEDACRKINKE-VGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPG 341
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RK+V++TNIAETSLTID I+YVIDPGF KQ +N R +ESL V PISKASA+QR+G
Sbjct: 342 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 401
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 402 RTRPGKCFR 410
Score = 377 (137.8 bits), Expect = 1.9e-100, Sum P(2) = 1.9e-100
Identities = 80/234 (34%), Positives = 132/234 (56%)
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1145
+ E P +++ + EF + +L V + +PRE + + ++ K
Sbjct: 488 IMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADE------AK 541
Query: 1146 SR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
+R + GDHL LLN+Y+ + + WCYENFI +R+MK A +VR+QL+ ++ R ++
Sbjct: 542 ARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLK 601
Query: 1205 LVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1260
+ S + +NIRKA+ AGYF +A L ++G Y T K NQ V +HP++ L + P W
Sbjct: 602 MCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKPEW 660
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1314
V+Y+E V T++ F+R VT+I +WL++VA HYY + K++ + L K R
Sbjct: 661 VIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRVIEKLYKKR 714
Score = 332 (121.9 bits), Expect = 2.6e-115, Sum P(2) = 2.6e-115
Identities = 66/145 (45%), Positives = 96/145 (66%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEA--GFTKDKMK- 717
+I E +++LP++ K++ + + ++Q LI+ GETGSGKTTQIPQ++ +A T DK +
Sbjct: 53 DILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRK 112
Query: 718 --IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREF 775
+GCTQP EEM V +G EVGY+IRFEDC+S RT++KY+TDG L RE
Sbjct: 113 WLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREA 172
Query: 776 LSEPDLASYSVMIIDEAHPKVYVID 800
+++P L Y V+I+DEAH + D
Sbjct: 173 MADPLLERYKVIILDEAHERTLATD 197
Score = 40 (19.1 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 1063 LSKSGSYKTAKHNQTVMI--HPNSSLFEELPRWVL 1095
L K KT +NQT+++ S ++P++V+
Sbjct: 65 LQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVI 99
Score = 37 (18.1 bits), Expect = 3.6e-84, Sum P(2) = 3.6e-84
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 149 ILPVYSNLPTDMQTKIFLPTPPNARKVVLA--TNIAETSLTIDNIIYVID 196
IL LP +Q + FL T N + ++L T +T+ +I +D
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVD 103
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 818 (293.0 bits), Expect = 4.1e-147, Sum P(2) = 4.1e-147
Identities = 153/348 (43%), Positives = 234/348 (67%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YVID G+CK +N R GM+SL V PISKA+ANQ +C+RLYT A+K+E
Sbjct: 946 LYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYE 1005
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L DN +PEIQR NLGN VL LK++G+ +L+ FDF+DPPP + ++ ++ QL+ LGAL+ G
Sbjct: 1006 LMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQG 1065
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T LG+RM+EFPLDP + KM++ +E+ C ++IVTI SMLS+ ++FYRPK +D
Sbjct: 1066 QITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMP-SVFYRPKGAEEESDA 1124
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
+R+ FF+ DHL LL++Y QW ++S+QWC E++I ++M++ R+VR QL+ ++ + +
Sbjct: 1125 SREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHD 1184
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE--ELPRW 1093
M++ S + IRKAIT+ YF+H AK+ G Y ++ +HP S+L+ P +
Sbjct: 1185 MKVESCGSNWDIIRKAITSSYFHHSAKIKGIGEYVNMRNGMPCFLHPTSALYGLGYAPDY 1244
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELEDSTNKKMP 1140
++YHELV T+KE+M+ VT ++ WL E+ P ++ + L+D K P
Sbjct: 1245 IVYHELVMTSKEYMQIVTAVDPNWLAEMGPMFFSIKKSLKDKKRKLDP 1292
Score = 696 (250.1 bits), Expect = 4.1e-147, Sum P(2) = 4.1e-147
Identities = 129/229 (56%), Positives = 176/229 (76%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE ++P+L YS +I+DEAHER+L+TD+LFG++K ++ R D+KL+++SAT+
Sbjct: 755 MTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATM 814
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D++KFS FF D PVF IPGR FPVD+ ++K P DY+D+ V IL IH TQ +GDILVF+
Sbjct: 815 DSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFM 874
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQE+IET +++R+++LG + L +LP+YS LP+DMQ KIF +RK ++ATN
Sbjct: 875 TGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATN 934
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLT+D I+YVID G+CK +N R GM+SL V PISKA+ANQR+G
Sbjct: 935 IAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSG 983
Score = 374 (136.7 bits), Expect = 2.1e-113, Sum P(3) = 2.1e-113
Identities = 86/199 (43%), Positives = 120/199 (60%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELL-LDNQIDFIQALSLPGNRDKGEEEMTEKQ 656
E K +++Q+++ G ++ +E E+L Q F L+ P +G E +
Sbjct: 595 EDEKEKEQQLANG---GGGGEQIDKETGEVLNYKAQSQFASHLT-PNKPTEGSSEFS--- 647
Query: 657 KKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKM 716
K I+E ++ LPI+ + DL+ +R++ V+II GETGSGKTTQ+ QYL+E G++K
Sbjct: 648 -KTKTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFG- 705
Query: 717 KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
KIGCTQP EEM V LG EVGY+IRFEDCTS T IKYMTDG L RE
Sbjct: 706 KIGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESF 765
Query: 777 SEPDLASYSVMIIDEAHPK 795
++P+L YS +I+DEAH +
Sbjct: 766 NDPNLDKYSAIIMDEAHER 784
Score = 324 (119.1 bits), Expect = 9.4e-94, Sum P(2) = 9.4e-94
Identities = 64/193 (33%), Positives = 113/193 (58%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L + +Y+P+ E+ ++ K DHL LL++Y QW ++S+QWC E+
Sbjct: 1105 MLSMPSVFYRPKGAEEESDASREKFFVPE-----SDHLTLLHVYQQWKINNYSSQWCAEH 1159
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
+I ++M++ R+VR QL+ ++ + +M++ S + IRKAIT+ YF+H AK+ G Y
Sbjct: 1160 YIHIKAMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHHSAKIKGIGEYV 1219
Query: 1238 TAKHNQTVMIHPNSSLFE--ELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
++ +HP S+L+ P +++YHELV T+KE+M+ VT ++ WL E+ P ++
Sbjct: 1220 NMRNGMPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLAEMGPMFFSI 1279
Query: 1295 PRELEDSTNKKMP 1307
+ L+D K P
Sbjct: 1280 KKSLKDKKRKLDP 1292
Score = 49 (22.3 bits), Expect = 3.0e-79, Sum P(3) = 3.0e-79
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 595 PHYEQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTE 654
PH ++ ++E+E+ F G D + E + + D + L K EEE T
Sbjct: 415 PHLKEEEYEEEE-----FDRGYYDADEGEG-GVFDSSNADSV-FLGDEKKFKKMEEEFTR 467
Query: 655 KQKKKLNIEETK 666
QKKK+ ++ +
Sbjct: 468 SQKKKVTAKQNQ 479
Score = 45 (20.9 bits), Expect = 2.1e-113, Sum P(3) = 2.1e-113
Identities = 13/84 (15%), Positives = 32/84 (38%)
Query: 450 DDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESR 509
DD + D+ S NRD + +++R+D + +++ P+ R +
Sbjct: 250 DDYRRDDKSSSSSSNRDDYRRDDRSSNREDYKRDDRSSSYRRGEDFNKNSETPQRRYNDQ 309
Query: 510 RKYLEKRKEDKVAELEADILDDEY 533
+ ++ + I ++Y
Sbjct: 310 TPSRDSNRDPSYKRDDRSINRNDY 333
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 777 (278.6 bits), Expect = 2.7e-143, Sum P(2) = 2.7e-143
Identities = 157/350 (44%), Positives = 220/350 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VID G+CK FN R GM++L + PIS+A+ANQ +CFRLYT AYK+E
Sbjct: 357 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNE 416
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 417 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 476
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 477 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 535
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 536 IREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 595
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 596 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 655
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST--NKKMPK 1141
++YHELV TTKE+M+ VT ++ +WL E+ P +Y ++ S N++ K
Sbjct: 656 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAK 705
Score = 658 (236.7 bits), Expect = 2.7e-143, Sum P(2) = 2.7e-143
Identities = 125/241 (51%), Positives = 173/241 (71%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 167 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 226
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 227 DAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 286
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 287 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 345
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLT+D I++VID G+CK FN R GM++L + PIS+A+ANQR+G P F
Sbjct: 346 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 405
Query: 241 R 241
R
Sbjct: 406 R 406
Score = 409 (149.0 bits), Expect = 5.4e-117, Sum P(2) = 5.4e-117
Identities = 88/182 (48%), Positives = 114/182 (62%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
+G K E ++ L D ++D+ + K E +E KKK +I E ++ LPI+
Sbjct: 18 MGVKKEEEPDK-ALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKK-SILEQRQYLPIFA 75
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
+Q+L+ +RD+ ++I+ GETGSGKTTQ+ QYLHE G+T D IGCTQP
Sbjct: 76 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPRRVAAMSVAK 134
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEMG LG EVGYAIRFEDCTSE T+IKYMTDG L RE L E DL YS +I+DEAH
Sbjct: 135 RVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAH 194
Query: 794 PK 795
+
Sbjct: 195 ER 196
Score = 321 (118.1 bits), Expect = 1.5e-94, Sum P(2) = 1.5e-94
Identities = 69/195 (35%), Positives = 110/195 (56%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 516 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLTYLNVYLQWKNNNYSTIWCNDH 570
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 571 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 630
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 631 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 690
Query: 1296 RELEDST--NKKMPK 1308
++ S N++ K
Sbjct: 691 KQAGKSRQENRRRAK 705
Score = 48 (22.0 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 262 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 321
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 322 PSDLQAKIFQKAPDGVRK 339
Score = 48 (22.0 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 262 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 321
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 322 PSDLQAKIFQKAPDGVRK 339
Score = 43 (20.2 bits), Expect = 3.1e-65, Sum P(2) = 3.1e-65
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 514 VSMLSVPAIFYRPKGREEESDQIREKFAVPES 545
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 756 (271.2 bits), Expect = 2.9e-143, Sum P(2) = 2.9e-143
Identities = 148/244 (60%), Positives = 188/244 (77%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRF--RSDLKLLISSA 58
+TDG L REFL +P L YS ++IDEAHERTL T+IL L+KD++ + DLK++I+SA
Sbjct: 327 VTDGMLLREFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASA 386
Query: 59 TLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDIL 117
T++A+KFS+FF++AP+ IPGRRFPV I+YTK PEA+YI A + +I QIH TQPL GDIL
Sbjct: 387 TINAEKFSQFFNNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDIL 446
Query: 118 VFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVL 177
VFLTGQ+EIET EIL+D + +LG +I +I+ +Y+NLP ++Q KIF PTP N RK+VL
Sbjct: 447 VFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVL 506
Query: 178 ATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPL 237
ATNIAETS+TID I YVIDPG+ KQN +N TGMESL VVP S+ASA+QRAG P
Sbjct: 507 ATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPG 566
Query: 238 SDFR 241
FR
Sbjct: 567 KCFR 570
Score = 680 (244.4 bits), Expect = 2.9e-143, Sum P(2) = 2.9e-143
Identities = 138/312 (44%), Positives = 202/312 (64%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPG+ KQN +N TGMESL VVP S+ASA+Q KCFRL+T W++ +EL
Sbjct: 522 YVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNEL 581
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ N PEIQR+NL + +L+L +LGINDL+ F+F+DPP E ++ AL LYALGALN G
Sbjct: 582 DSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALNTQGK 641
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LTK G++M+EFPLDP+ K +L S+K+ ++I++I +ML+ + +FYRPKDK AD
Sbjct: 642 LTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKKELADKR 701
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
++ F L GD +LL I+ QW D+ +S QWC + FIQ+++MKR +++ EQLI L +++ +
Sbjct: 702 KQEFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGI 761
Query: 1037 ELVS----------NPTETVNIRKAITAGYFYHIAKLSKSGS-YK---TAK--HNQTVMI 1080
E+ S N + K + +G+F +I KLS G Y+ K +N I
Sbjct: 762 EVNSRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYI 821
Query: 1081 HPNSSLFEELPR 1092
HP+S +++ P+
Sbjct: 822 HPSSCIYKLKPK 833
Score = 408 (148.7 bits), Expect = 3.9e-106, Sum P(2) = 3.9e-106
Identities = 91/239 (38%), Positives = 135/239 (56%)
Query: 602 WEDEQMSSAIFRVGAKDRE-H---QEQYELLLDNQ--IDFIQALSLPGNRDKGEEEMTEK 655
WEDEQ A + D + H ++YE + D +++ LPGN ++ EEE +
Sbjct: 152 WEDEQFKRADQLILQNDDKIHINDDKEYEFVFDQTQFVNYDDIEELPGNGEEEEEEESGI 211
Query: 656 QKKKLNI----EETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF 711
+ I +E +KSLP+Y ++++ + + ++Q LI+ GETGSGKTTQ+PQYLHEAG+
Sbjct: 212 RDSDSIIGNKYDEVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGY 271
Query: 712 TKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFED-CTSERTIIKYMTDGT 770
+++ I CTQP EM VKLG +VGY IRF+D C T+IKY+TDG
Sbjct: 272 SRNNQVIACTQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGM 331
Query: 771 LHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASAN 829
L REFL +P L YS ++IDEAH + + + T + L ++ I+ A+ N
Sbjct: 332 LLREFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKII-IASATIN 389
Score = 203 (76.5 bits), Expect = 6.9e-93, Sum P(2) = 6.9e-93
Identities = 54/189 (28%), Positives = 102/189 (53%)
Query: 1089 ELPRWVLYHELVFTTKEF--MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKS 1146
E P ++ + + T+ +F +Q+ I + L E + +Y+P++ ++ +K+ +
Sbjct: 651 EFPLDPVFTKCILTSDKFDNTKQIISIIAM-LNESSNLFYRPKDKKELADKRKQEF---- 705
Query: 1147 RAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1206
+L GD +LL I+ QW D+ +S QWC + FIQ+++MKR +++ EQLI L +++ +E+
Sbjct: 706 -NDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGIEVN 764
Query: 1207 S----------NPTETVNIRKAITAGYFYHIAKLSKSGS-YK---TAK--HNQTVMIHPN 1250
S N + K + +G+F +I KLS G Y+ K +N IHP+
Sbjct: 765 SRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPS 824
Query: 1251 SSLFEELPR 1259
S +++ P+
Sbjct: 825 SCIYKLKPK 833
Score = 118 (46.6 bits), Expect = 8.8e-86, Sum P(3) = 8.8e-86
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 1038 LVSNPTETVNIRKAITAGYFYHIAKLSKSGS-YK---TAK--HNQTVMIHPNSSLFE--E 1089
L N + K + +G+F +I KLS G Y+ K +N IHP+S +++
Sbjct: 773 LQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKP 832
Query: 1090 LPRWVLYHELVFTTKEFMRQVTEIESKWLLE 1120
P+++LY+ELV T+KE+MR ++ K + E
Sbjct: 833 KPKYLLYYELVLTSKEYMRNCIILDEKLIKE 863
Score = 38 (18.4 bits), Expect = 8.8e-86, Sum P(3) = 8.8e-86
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 645 RDKGEEEMTEKQKKKLN 661
R K ++E+ +K+K++ N
Sbjct: 690 RPKDKKELADKRKQEFN 706
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 774 (277.5 bits), Expect = 8.6e-142, Sum P(2) = 8.6e-142
Identities = 144/358 (40%), Positives = 236/358 (65%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YV+D G+ K +N + GM++L + PIS+A+A+Q K FRL+T A+K E
Sbjct: 589 MYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDE 648
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L T+PEIQR NL N +L++K+LG+ D++ FDF+DPPP +T+ +L L+ALGAL++ G
Sbjct: 649 LYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLG 708
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
D+T LGR+M FP+DP + K+++ +E+Y C EE++TI SMLSV +FYRPK++ +D
Sbjct: 709 DMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPN-VFYRPKERQEESDA 767
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR+ FF+ DHL L++Y+QW S WC +F+ +S++RA++VR+QL+ +++ +
Sbjct: 768 AREKFFVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMKTQK 827
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M++VS T+ +R+ I +GY++ AK+ G Y + + TV +HP S+L+ LP +
Sbjct: 828 MDIVSCGTDWDVVRRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGLGFLPDY 887
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST-NKKMPKTLGKSRAEL 1150
V+YHEL+ T+KE+M VT ++ WL ++ +Y +E S +K++ +T + E+
Sbjct: 888 VVYHELILTSKEYMSTVTSVDPMWLADLGGVFYSVKEKGYSARDKRVVETEFNRKMEI 945
Score = 647 (232.8 bits), Expect = 8.6e-142, Sum P(2) = 8.6e-142
Identities = 125/241 (51%), Positives = 173/241 (71%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L+EPDL YS +I+DEAHER L+TD+L GL K I++ R DLKL+++SAT+
Sbjct: 399 MTDGVLLRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATM 458
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A++FS+FF AP F IPGR FPVD+ ++++P DY+D V +L IH + GDILVF+
Sbjct: 459 NAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFM 518
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQE+IE E++++R+ L K L ILP+YS +P D+Q KIF PP RK ++ATN
Sbjct: 519 TGQEDIEVTCELVRERLDALNDPPK-LSILPIYSQMPADLQAKIFDRAPPGVRKCIVATN 577
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLT+D I+YV+D G+ K +N + GM++L + PIS+A+A+QR+G P F
Sbjct: 578 IAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAF 637
Query: 241 R 241
R
Sbjct: 638 R 638
Score = 373 (136.4 bits), Expect = 7.5e-113, Sum P(2) = 7.5e-113
Identities = 75/140 (53%), Positives = 97/140 (69%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGC 720
+I E ++ LP + ++DL+ +RD+QV+I+ GETGSGKTTQ+ Q+L+E G+ + M IGC
Sbjct: 295 SIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGM-IGC 353
Query: 721 TQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQP EEM VKLG VGYAIRFEDCTS+ T+IKYMTDG L RE L+EPD
Sbjct: 354 TQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPD 413
Query: 781 LASYSVMIIDEAHPKVYVID 800
L YS +I+DEAH + D
Sbjct: 414 LDRYSCIIMDEAHERALNTD 433
Score = 313 (115.2 bits), Expect = 2.3e-88, Sum P(2) = 2.3e-88
Identities = 63/203 (31%), Positives = 118/203 (58%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+E ++ ++ K DHL L++Y+QW S WC +
Sbjct: 748 MLSVPNVFYRPKERQEESDAAREKFFVPE-----SDHLTFLHVYSQWKANGHSDAWCSRH 802
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ +S++RA++VR+QL+ +++ +M++VS T+ +R+ I +GY++ AK+ G Y
Sbjct: 803 FLHSKSLRRAKEVRDQLLDIMKTQKMDIVSCGTDWDVVRRCICSGYYHQAAKVKGIGEYI 862
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ + TV +HP S+L+ LP +V+YHEL+ T+KE+M VT ++ WL ++ +Y
Sbjct: 863 NLRTSVTVQLHPTSALYGLGFLPDYVVYHELILTSKEYMSTVTSVDPMWLADLGGVFYSV 922
Query: 1296 RELEDST-NKKMPKTLGKSRAEL 1317
+E S +K++ +T + E+
Sbjct: 923 KEKGYSARDKRVVETEFNRKMEI 945
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 777 (278.6 bits), Expect = 9.9e-139, Sum P(2) = 9.9e-139
Identities = 157/350 (44%), Positives = 220/350 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VID G+CK FN R GM++L + PIS+A+ANQ +CFRLYT AYK+E
Sbjct: 817 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNE 876
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 877 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 936
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 937 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 995
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 996 IREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 1055
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 1056 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 1115
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST--NKKMPK 1141
++YHELV TTKE+M+ VT ++ +WL E+ P +Y ++ S N++ K
Sbjct: 1116 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAK 1165
Score = 657 (236.3 bits), Expect = 9.9e-139, Sum P(2) = 9.9e-139
Identities = 125/241 (51%), Positives = 173/241 (71%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 627 MTDGILLRESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 686
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 687 DAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 746
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 747 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 805
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLT+D I++VID G+CK FN R GM++L + PIS+A+ANQR+G P F
Sbjct: 806 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 865
Query: 241 R 241
R
Sbjct: 866 R 866
Score = 410 (149.4 bits), Expect = 3.9e-114, Sum P(4) = 3.9e-114
Identities = 88/182 (48%), Positives = 114/182 (62%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
+G K E ++ L D ++D+ + K E +E KKK +I E ++ LPI+
Sbjct: 478 MGVKKEEEPDK-ALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKK-SILEQRQYLPIFA 535
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
+Q+L+ +RD+ ++I+ GETGSGKTTQ+ QYLHE G+T D IGCTQP
Sbjct: 536 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPRRVAAMSVAK 594
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEMG LG EVGYAIRFEDCTSE T+IKYMTDG L RE L E DL YS +I+DEAH
Sbjct: 595 RVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAVIMDEAH 654
Query: 794 PK 795
+
Sbjct: 655 ER 656
Score = 321 (118.1 bits), Expect = 2.1e-89, Sum P(2) = 2.1e-89
Identities = 69/195 (35%), Positives = 110/195 (56%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 976 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLTYLNVYLQWKNNNYSTIWCNDH 1030
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 1031 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 1090
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1091 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1150
Query: 1296 RELEDST--NKKMPK 1308
++ S N++ K
Sbjct: 1151 KQAGKSRQENRRRAK 1165
Score = 57 (25.1 bits), Expect = 3.9e-114, Sum P(4) = 3.9e-114
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 431 VFKTPKVR-AFMGHFLTDS--DDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXX 487
VFK P R + +G L S +R+E+DE ++ K+R ++ K+ S+ D+R
Sbjct: 38 VFKAPAPRPSLLGLDLLASLKRREREEKDEGEDKKKSRI-SSYKDWEESKDDQRDAEEEG 96
Query: 488 XXXXXXXXSRDKIIPKLRIES 508
+D+ R+E+
Sbjct: 97 SDQAGRHSRKDRHYRSARVET 117
Score = 48 (22.0 bits), Expect = 1.7e-33, Sum P(4) = 1.7e-33
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 722 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 781
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 782 PSDLQAKIFQKAPDGVRK 799
Score = 48 (22.0 bits), Expect = 1.7e-33, Sum P(4) = 1.7e-33
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 722 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 781
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 782 PSDLQAKIFQKAPDGVRK 799
Score = 43 (20.2 bits), Expect = 1.1e-112, Sum P(4) = 1.1e-112
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 447 DSDDDRKER--DEFSERLKNRD-KNNTKNVATSRQD 479
+ D +KER D S+R + RD ++ +++ + S +D
Sbjct: 150 EEKDRKKERSRDRDSDRKRERDERDRSRHSSRSERD 185
Score = 43 (20.2 bits), Expect = 4.1e-60, Sum P(2) = 4.1e-60
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 974 VSMLSVPAIFYRPKGREEESDQIREKFAVPES 1005
Score = 38 (18.4 bits), Expect = 3.8e-75, Sum P(3) = 3.8e-75
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQK 657
E+++WED+Q A D + E + L + D+++ ++ K ++ Q+
Sbjct: 310 ERQQWEDDQRQ-ADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQK--QKRISAQR 366
Query: 658 KKLNIEETKK 667
+++N E+ ++
Sbjct: 367 RQIN-EDNER 375
Score = 37 (18.1 bits), Expect = 3.9e-114, Sum P(4) = 3.9e-114
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 506 IESRRKYLEKRKEDKVAELEADILDD 531
+ R ++L K+K+ +++ I +D
Sbjct: 347 VRRREQHLHKQKQKRISAQRRQINED 372
Score = 37 (18.1 bits), Expect = 4.9e-112, Sum P(4) = 4.9e-112
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 452 RKERDEFSERLKNRDKNNTK 471
++E+D ER ++RD + +
Sbjct: 149 KEEKDRKKERSRDRDSDRKR 168
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 777 (278.6 bits), Expect = 1.0e-138, Sum P(2) = 1.0e-138
Identities = 157/350 (44%), Positives = 220/350 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VID G+CK FN R GM++L + PIS+A+ANQ +CFRLYT AYK+E
Sbjct: 818 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNE 877
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 878 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 937
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 938 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 996
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 997 IREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 1056
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 1057 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 1116
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST--NKKMPK 1141
++YHELV TTKE+M+ VT ++ +WL E+ P +Y ++ S N++ K
Sbjct: 1117 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAK 1166
Score = 657 (236.3 bits), Expect = 1.0e-138, Sum P(2) = 1.0e-138
Identities = 125/241 (51%), Positives = 173/241 (71%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 687
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 688 DAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 747
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 748 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 806
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLT+D I++VID G+CK FN R GM++L + PIS+A+ANQR+G P F
Sbjct: 807 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 866
Query: 241 R 241
R
Sbjct: 867 R 867
Score = 404 (147.3 bits), Expect = 3.9e-112, Sum P(4) = 3.9e-112
Identities = 86/182 (47%), Positives = 114/182 (62%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
+G K E ++ + D ++D+ + + E +E KKK +I E ++ LPI+
Sbjct: 479 MGVKKEEEPDK-AVTEDGKVDYRTEQKFADHMKRKSEASSEFAKKK-SILEQRQYLPIFA 536
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
+Q+L+ +RD+ ++I+ GETGSGKTTQ+ QYLHE G+T D IGCTQP
Sbjct: 537 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPRRVAAMSVAK 595
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEMG LG EVGYAIRFEDCTSE T+IKYMTDG L RE L E DL YS +I+DEAH
Sbjct: 596 RVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAH 655
Query: 794 PK 795
+
Sbjct: 656 ER 657
Score = 321 (118.1 bits), Expect = 2.1e-89, Sum P(2) = 2.1e-89
Identities = 69/195 (35%), Positives = 110/195 (56%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 977 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLTYLNVYLQWKNNNYSTIWCNDH 1031
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 1032 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 1091
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1092 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
Query: 1296 RELEDST--NKKMPK 1308
++ S N++ K
Sbjct: 1152 KQAGKSRQENRRRAK 1166
Score = 48 (22.0 bits), Expect = 1.7e-31, Sum P(4) = 1.7e-31
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 723 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 782
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 783 PSDLQAKIFQKAPDGVRK 800
Score = 48 (22.0 bits), Expect = 1.7e-31, Sum P(4) = 1.7e-31
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 723 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 782
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 783 PSDLQAKIFQKAPDGVRK 800
Score = 44 (20.5 bits), Expect = 3.9e-112, Sum P(4) = 3.9e-112
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 417 TDRRTQSPCPSCLKVFKTPKVR-AFMGHFLTDSDDDRKERDEFSE 460
+ RR+Q PS TP R + H L+ D DR R ++S+
Sbjct: 224 SSRRSQWESPS-----PTPSYRDSERSHRLSTRDRDRSVRGKYSD 263
Score = 43 (20.2 bits), Expect = 4.2e-60, Sum P(2) = 4.2e-60
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 975 VSMLSVPAIFYRPKGREEESDQIREKFAVPES 1006
Score = 38 (18.4 bits), Expect = 8.8e-74, Sum P(3) = 8.8e-74
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQK 657
E+++WED+Q A D + E + L + D+++ ++ K ++ Q+
Sbjct: 311 ERQQWEDDQRQ-ADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQK--QKRISAQR 367
Query: 658 KKLNIEETKK 667
+++N E+ ++
Sbjct: 368 RQIN-EDNER 376
Score = 37 (18.1 bits), Expect = 3.9e-112, Sum P(4) = 3.9e-112
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 506 IESRRKYLEKRKEDKVAELEADILDD 531
+ R ++L K+K+ +++ I +D
Sbjct: 348 VRRREQHLHKQKQKRISAQRRQINED 373
Score = 37 (18.1 bits), Expect = 1.7e-111, Sum P(3) = 1.7e-111
Identities = 19/75 (25%), Positives = 24/75 (32%)
Query: 452 RKERDEFSERLKNRD-----KNNTKNVAT-SRQDKRXXXXXXXXXXXXXXSRDKIIPKLR 505
R ERD SER R+ ++ K+ AT SR P R
Sbjct: 181 RSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWESPSPTPSYR 240
Query: 506 IESRRKYLEKRKEDK 520
R L R D+
Sbjct: 241 DSERSHRLSTRDRDR 255
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 791 (283.5 bits), Expect = 1.3e-138, Sum P(2) = 1.3e-138
Identities = 162/407 (39%), Positives = 252/407 (61%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VIDPGFCK +N R GM++L++ P+S+ASANQ +C+RLYT +K E
Sbjct: 728 LFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDE 787
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPEIQR NL N VL+LK+LG++DL+ F F+D PP + ++ ++ QL+ LGAL++ G
Sbjct: 788 LLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTG 847
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT +GR+M EFPLDP + KML+ S + C +E++TI SMLSV AIF+RPK + AD
Sbjct: 848 QLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVP-AIFFRPKGREEEADA 906
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
++ F + DHL LN+Y QW +S +WC +N++ +++K+ R+VR QL ++Q ++
Sbjct: 907 KKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLK 966
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
+ L+SN +E +RK I + YF++ A+L G Y + +HP S+LF +P +
Sbjct: 967 LPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDY 1026
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNK-KMP--KTLGKSRAEL 1150
V+YHEL+ T KE+M+ VT +++ WL E+ P +Y +E + S + KM +T+ AE+
Sbjct: 1027 VVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKMESVRTVETMEAEM 1086
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1197
+ + + +D F ++ S K AR R +L GL
Sbjct: 1087 R-EAQKEMERRKEESDKAFKRPESSRRVVEVGS-KSARSERRKLWGL 1131
Score = 632 (227.5 bits), Expect = 1.3e-138, Sum P(2) = 1.3e-138
Identities = 119/231 (51%), Positives = 171/231 (74%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L + L YS +I+DEAHER+L+TD+LFGL+++++ R+DLKL+++SAT+
Sbjct: 537 MTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATM 596
Query: 61 DAQKFSEFFD-DAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVF 119
DA KF++FF + P F IPGR FPV++++ + P DY+DA V + IH GDIL+F
Sbjct: 597 DADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIF 656
Query: 120 LTGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
+ GQE+IE TC E++++++ L + L +LP+YS LP+D+Q KIF P RK ++A
Sbjct: 657 MPGQEDIECTC-EMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVA 714
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TNIAETSLT+D I++VIDPGFCK +N R GM++L++ P+S+ASANQR G
Sbjct: 715 TNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTG 765
Score = 361 (132.1 bits), Expect = 3.2e-110, Sum P(3) = 3.2e-110
Identities = 74/149 (49%), Positives = 101/149 (67%)
Query: 647 KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYL 706
K E +++ +K +I++ ++ LP++ +Q +++ +R++ V+II GETGSGKTTQ+ QYL
Sbjct: 420 KDNEAVSDFAMEK-SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYL 478
Query: 707 HEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYM 766
E GF D IGCTQP +EMGV LG +VGYAIRFEDCTSE+TIIKYM
Sbjct: 479 LEDGFG-DSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYM 537
Query: 767 TDGTLHREFLSEPDLASYSVMIIDEAHPK 795
TDG L RE L + L YS +I+DEAH +
Sbjct: 538 TDGILLRECLGDGSLDQYSAIIMDEAHER 566
Score = 326 (119.8 bits), Expect = 2.2e-87, Sum P(2) = 2.2e-87
Identities = 68/207 (32%), Positives = 118/207 (57%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +++P+ E+ + K K DHL LN+Y QW +S +WC +N
Sbjct: 887 MLSVPAIFFRPKGREEEADAKKEKFQVPE-----SDHLTFLNVYIQWRTHKYSAKWCADN 941
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
++ +++K+ R+VR QL ++Q +++ L+SN +E +RK I + YF++ A+L G Y
Sbjct: 942 YLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYV 1001
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP S+LF +P +V+YHEL+ T KE+M+ VT +++ WL E+ P +Y
Sbjct: 1002 NVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061
Query: 1296 RELEDSTNK-KMP--KTLGKSRAELGE 1319
+E + S + KM +T+ AE+ E
Sbjct: 1062 KESKQSRKELKMESVRTVETMEAEMRE 1088
Score = 53 (23.7 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 630 DNQIDFIQALSLPGN--RDKGEEEMTEKQKKKLNIEET 665
D + + LS+P R KG EE + +K+K + E+
Sbjct: 879 DEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPES 916
Score = 49 (22.3 bits), Expect = 1.9e-77, Sum P(3) = 1.9e-77
Identities = 25/112 (22%), Positives = 48/112 (42%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALS--LPGNRDKGEEEMTEK 655
E+ +WE+EQ + DRE + E D++ + +S R+K +E T+K
Sbjct: 218 ERAQWEEEQKNL--------DREWYDN-EGAFDDEYNPFNKVSDEFVEKREKQWQEKTQK 268
Query: 656 QKKKLNIEETKKSLPIYP---FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
+ + + K+ ++ + + A+ D I E ET + T + Q
Sbjct: 269 PRLTVKQQAIKRENELWENNRLHRSGVVAMADELSSIFEDETDENRVTILVQ 320
Score = 39 (18.8 bits), Expect = 3.2e-110, Sum P(3) = 3.2e-110
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 421 TQSPCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERDEFSERLKNRDKNNTKN 472
T+S KV + + R G DDDR+ + SER + + K+
Sbjct: 68 TESVRKGIEKVHEKHRDRDDRGMKYKSRDDDRRRDRDRSERREPSSRRGWKD 119
Score = 38 (18.4 bits), Expect = 4.0e-110, Sum P(3) = 4.0e-110
Identities = 22/88 (25%), Positives = 30/88 (34%)
Query: 449 DDDRKERDEFSERL--KNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRI 506
D DR ER E S R K+R + T R +P R
Sbjct: 102 DRDRSERREPSSRRGWKDRSGDQTPRFKVPDTPSRMSWDQDDREGSSRKRNSWDMPTPRG 161
Query: 507 E-SRRKYLEKRKEDKVA-ELEADILDDE 532
E R++Y++ + A E DDE
Sbjct: 162 ERDRKRYMDSERSISSAWRSERRNRDDE 189
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 791 (283.5 bits), Expect = 1.3e-138, Sum P(2) = 1.3e-138
Identities = 162/407 (39%), Positives = 252/407 (61%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VIDPGFCK +N R GM++L++ P+S+ASANQ +C+RLYT +K E
Sbjct: 728 LFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDE 787
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPEIQR NL N VL+LK+LG++DL+ F F+D PP + ++ ++ QL+ LGAL++ G
Sbjct: 788 LLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTG 847
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT +GR+M EFPLDP + KML+ S + C +E++TI SMLSV AIF+RPK + AD
Sbjct: 848 QLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVP-AIFFRPKGREEEADA 906
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
++ F + DHL LN+Y QW +S +WC +N++ +++K+ R+VR QL ++Q ++
Sbjct: 907 KKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLK 966
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
+ L+SN +E +RK I + YF++ A+L G Y + +HP S+LF +P +
Sbjct: 967 LPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDY 1026
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNK-KMP--KTLGKSRAEL 1150
V+YHEL+ T KE+M+ VT +++ WL E+ P +Y +E + S + KM +T+ AE+
Sbjct: 1027 VVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKMESVRTVETMEAEM 1086
Query: 1151 GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1197
+ + + +D F ++ S K AR R +L GL
Sbjct: 1087 R-EAQKEMERRKEESDKAFKRPESSRRVVEVGS-KSARSERRKLWGL 1131
Score = 632 (227.5 bits), Expect = 1.3e-138, Sum P(2) = 1.3e-138
Identities = 119/231 (51%), Positives = 171/231 (74%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L + L YS +I+DEAHER+L+TD+LFGL+++++ R+DLKL+++SAT+
Sbjct: 537 MTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATM 596
Query: 61 DAQKFSEFFD-DAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVF 119
DA KF++FF + P F IPGR FPV++++ + P DY+DA V + IH GDIL+F
Sbjct: 597 DADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIF 656
Query: 120 LTGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
+ GQE+IE TC E++++++ L + L +LP+YS LP+D+Q KIF P RK ++A
Sbjct: 657 MPGQEDIECTC-EMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVA 714
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TNIAETSLT+D I++VIDPGFCK +N R GM++L++ P+S+ASANQR G
Sbjct: 715 TNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTG 765
Score = 361 (132.1 bits), Expect = 3.2e-110, Sum P(3) = 3.2e-110
Identities = 74/149 (49%), Positives = 101/149 (67%)
Query: 647 KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYL 706
K E +++ +K +I++ ++ LP++ +Q +++ +R++ V+II GETGSGKTTQ+ QYL
Sbjct: 420 KDNEAVSDFAMEK-SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYL 478
Query: 707 HEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYM 766
E GF D IGCTQP +EMGV LG +VGYAIRFEDCTSE+TIIKYM
Sbjct: 479 LEDGFG-DSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYM 537
Query: 767 TDGTLHREFLSEPDLASYSVMIIDEAHPK 795
TDG L RE L + L YS +I+DEAH +
Sbjct: 538 TDGILLRECLGDGSLDQYSAIIMDEAHER 566
Score = 326 (119.8 bits), Expect = 2.2e-87, Sum P(2) = 2.2e-87
Identities = 68/207 (32%), Positives = 118/207 (57%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +++P+ E+ + K K DHL LN+Y QW +S +WC +N
Sbjct: 887 MLSVPAIFFRPKGREEEADAKKEKFQVPE-----SDHLTFLNVYIQWRTHKYSAKWCADN 941
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
++ +++K+ R+VR QL ++Q +++ L+SN +E +RK I + YF++ A+L G Y
Sbjct: 942 YLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYV 1001
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP S+LF +P +V+YHEL+ T KE+M+ VT +++ WL E+ P +Y
Sbjct: 1002 NVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061
Query: 1296 RELEDSTNK-KMP--KTLGKSRAELGE 1319
+E + S + KM +T+ AE+ E
Sbjct: 1062 KESKQSRKELKMESVRTVETMEAEMRE 1088
Score = 53 (23.7 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 630 DNQIDFIQALSLPGN--RDKGEEEMTEKQKKKLNIEET 665
D + + LS+P R KG EE + +K+K + E+
Sbjct: 879 DEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPES 916
Score = 49 (22.3 bits), Expect = 1.9e-77, Sum P(3) = 1.9e-77
Identities = 25/112 (22%), Positives = 48/112 (42%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALS--LPGNRDKGEEEMTEK 655
E+ +WE+EQ + DRE + E D++ + +S R+K +E T+K
Sbjct: 218 ERAQWEEEQKNL--------DREWYDN-EGAFDDEYNPFNKVSDEFVEKREKQWQEKTQK 268
Query: 656 QKKKLNIEETKKSLPIYP---FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
+ + + K+ ++ + + A+ D I E ET + T + Q
Sbjct: 269 PRLTVKQQAIKRENELWENNRLHRSGVVAMADELSSIFEDETDENRVTILVQ 320
Score = 39 (18.8 bits), Expect = 3.2e-110, Sum P(3) = 3.2e-110
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 421 TQSPCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERDEFSERLKNRDKNNTKN 472
T+S KV + + R G DDDR+ + SER + + K+
Sbjct: 68 TESVRKGIEKVHEKHRDRDDRGMKYKSRDDDRRRDRDRSERREPSSRRGWKD 119
Score = 38 (18.4 bits), Expect = 4.0e-110, Sum P(3) = 4.0e-110
Identities = 22/88 (25%), Positives = 30/88 (34%)
Query: 449 DDDRKERDEFSERL--KNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRI 506
D DR ER E S R K+R + T R +P R
Sbjct: 102 DRDRSERREPSSRRGWKDRSGDQTPRFKVPDTPSRMSWDQDDREGSSRKRNSWDMPTPRG 161
Query: 507 E-SRRKYLEKRKEDKVA-ELEADILDDE 532
E R++Y++ + A E DDE
Sbjct: 162 ERDRKRYMDSERSISSAWRSERRNRDDE 189
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 775 (277.9 bits), Expect = 1.4e-138, Sum P(2) = 1.4e-138
Identities = 157/350 (44%), Positives = 220/350 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VID G+CK FN R GM++L + PIS+A+ANQ +CFRLYT AYK+E
Sbjct: 818 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNE 877
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 878 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 937
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 938 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 996
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 997 IREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 1056
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 1057 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 1116
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST--NKKMPK 1141
++YHELV TTKE+M+ VT ++ +WL E+ P +Y ++ S N++ K
Sbjct: 1117 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAK 1166
Score = 658 (236.7 bits), Expect = 1.4e-138, Sum P(2) = 1.4e-138
Identities = 125/241 (51%), Positives = 173/241 (71%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 687
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 688 DAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 747
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 748 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 806
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLT+D I++VID G+CK FN R GM++L + PIS+A+ANQR+G P F
Sbjct: 807 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 866
Query: 241 R 241
R
Sbjct: 867 R 867
Score = 410 (149.4 bits), Expect = 2.8e-112, Sum P(4) = 2.8e-112
Identities = 88/182 (48%), Positives = 114/182 (62%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
+G K E ++ L D ++D+ + K E +E KKK +I E ++ LPI+
Sbjct: 479 MGVKKEEEPDK-SLTEDGKVDYRTEQKFADHMKKKSEASSEFAKKK-SILEQRQYLPIFA 536
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
+Q+L+ +RD+ ++I+ GETGSGKTTQ+ QYLHE G+T D IGCTQP
Sbjct: 537 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPRRVAAMSVAK 595
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEMG LG EVGYAIRFEDCTSE T+IKYMTDG L RE L E DL YS +I+DEAH
Sbjct: 596 RVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAH 655
Query: 794 PK 795
+
Sbjct: 656 ER 657
Score = 319 (117.4 bits), Expect = 2.6e-89, Sum P(2) = 2.6e-89
Identities = 69/195 (35%), Positives = 110/195 (56%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 977 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLSYLNVYLQWKNNNYSTIWCNDH 1031
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 1032 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 1091
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1092 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
Query: 1296 RELEDST--NKKMPK 1308
++ S N++ K
Sbjct: 1152 KQAGKSRQENRRRAK 1166
Score = 48 (22.0 bits), Expect = 6.0e-32, Sum P(4) = 6.0e-32
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 723 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 782
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 783 PSDLQAKIFQKAPDGVRK 800
Score = 48 (22.0 bits), Expect = 6.0e-32, Sum P(4) = 6.0e-32
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 723 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 782
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 783 PSDLQAKIFQKAPDGVRK 800
Score = 43 (20.2 bits), Expect = 3.2e-60, Sum P(2) = 3.2e-60
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 975 VSMLSVPAIFYRPKGREEESDQIREKFAVPES 1006
Score = 42 (19.8 bits), Expect = 2.8e-112, Sum P(4) = 2.8e-112
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 447 DSDDDRKER--DEFSERLKNRD-KNNTKNVATSRQD 479
D D +KER D +R ++RD ++ +++ S +D
Sbjct: 150 DEKDRKKERSRDRDCDRKRDRDERDRSRHSGRSERD 185
Score = 38 (18.4 bits), Expect = 2.6e-73, Sum P(3) = 2.6e-73
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQK 657
E+++WED+Q A D + E + L + D+++ ++ K ++ Q+
Sbjct: 311 ERQQWEDDQRQ-ADRDWYMMDEGYDEFHNPLAYSSDDYVRRREQHLHKQK--QKRISAQR 367
Query: 658 KKLNIEETKK 667
+++N E+ ++
Sbjct: 368 RQIN-EDNER 376
Score = 37 (18.1 bits), Expect = 2.8e-112, Sum P(4) = 2.8e-112
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 506 IESRRKYLEKRKEDKVAELEADILDD 531
+ R ++L K+K+ +++ I +D
Sbjct: 348 VRRREQHLHKQKQKRISAQRRQINED 373
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 777 (278.6 bits), Expect = 1.7e-138, Sum P(2) = 1.7e-138
Identities = 157/350 (44%), Positives = 220/350 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VID G+CK FN R GM++L + PIS+A+ANQ +CFRLYT AYK+E
Sbjct: 819 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNE 878
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 879 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 938
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 939 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 997
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 998 IREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 1057
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 1058 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 1117
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST--NKKMPK 1141
++YHELV TTKE+M+ VT ++ +WL E+ P +Y ++ S N++ K
Sbjct: 1118 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAK 1167
Score = 655 (235.6 bits), Expect = 1.7e-138, Sum P(2) = 1.7e-138
Identities = 125/241 (51%), Positives = 172/241 (71%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 629 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 688
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 689 DADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 748
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 749 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 807
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETSLT+D I++VID G+CK FN R GM++L + PIS+A+ANQR+G P F
Sbjct: 808 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 867
Query: 241 R 241
R
Sbjct: 868 R 868
Score = 401 (146.2 bits), Expect = 4.0e-112, Sum P(4) = 4.0e-112
Identities = 85/182 (46%), Positives = 114/182 (62%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
+G K E ++ + D ++D+ + + E +E KKK +I E ++ LPI+
Sbjct: 480 MGVKKEEEPDK-AMTEDGKVDYRTEQKFADHMKEKSEASSEFAKKK-SILEQRQYLPIFA 537
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
+Q+L+ +RD+ ++I+ GETGSGKTTQ+ QYLH+ G+T D IGCTQP
Sbjct: 538 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYT-DYGMIGCTQPRRVAAMSVAK 596
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEMG LG EVGYAIRFEDCTSE T+IKYMTDG L RE L E DL YS +I+DEAH
Sbjct: 597 RVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAH 656
Query: 794 PK 795
+
Sbjct: 657 ER 658
Score = 321 (118.1 bits), Expect = 3.5e-89, Sum P(2) = 3.5e-89
Identities = 69/195 (35%), Positives = 110/195 (56%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 978 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLTYLNVYLQWKNNNYSTIWCNDH 1032
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 1033 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 1092
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1093 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1152
Query: 1296 RELEDST--NKKMPK 1308
++ S N++ K
Sbjct: 1153 KQAGKSRQENRRRAK 1167
Score = 48 (22.0 bits), Expect = 1.8e-31, Sum P(4) = 1.8e-31
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 724 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 783
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 784 PSDLQAKIFQKAPDGVRK 801
Score = 48 (22.0 bits), Expect = 1.8e-31, Sum P(4) = 1.8e-31
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 724 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 783
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 784 PSDLQAKIFQKAPDGVRK 801
Score = 47 (21.6 bits), Expect = 4.0e-112, Sum P(4) = 4.0e-112
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
D D DRK RD ER ++R + ++ S + R
Sbjct: 161 DRDHDRK-RDRADERDRSRHSSRSERDGGSERSSR 194
Score = 43 (20.2 bits), Expect = 1.0e-111, Sum P(4) = 1.0e-111
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 456 DEFSERLKNRDKNNTKN--VATSRQDK 480
+EF ER + R+++ ++ A+S++DK
Sbjct: 126 EEFWERSRQRERDRREHGVYASSKEDK 152
Score = 43 (20.2 bits), Expect = 7.0e-60, Sum P(2) = 7.0e-60
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 976 VSMLSVPAIFYRPKGREEESDQIREKFAVPES 1007
Score = 39 (18.8 bits), Expect = 2.8e-111, Sum P(4) = 2.8e-111
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 452 RKERDEFSERLKNRDKNNTKNVATSRQDKR 481
++++D E+ ++RD + ++ A R R
Sbjct: 149 KEDKDRKKEKSRDRDHDRKRDRADERDRSR 178
Score = 39 (18.8 bits), Expect = 2.8e-111, Sum P(4) = 2.8e-111
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSR 477
+S DD+K+ +E + R ++ ++R
Sbjct: 84 ESKDDQKDAEEDGDEQAGRSSRRDRHYRSAR 114
Score = 38 (18.4 bits), Expect = 4.4e-74, Sum P(3) = 4.4e-74
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQK 657
E+++WED+Q A D + E + L + D+++ ++ K ++ Q+
Sbjct: 312 ERQQWEDDQRQ-ADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQK--QKRISAQR 368
Query: 658 KKLNIEETKK 667
+++N E+ ++
Sbjct: 369 RQIN-EDNER 377
Score = 37 (18.1 bits), Expect = 4.0e-112, Sum P(4) = 4.0e-112
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 506 IESRRKYLEKRKEDKVAELEADILDD 531
+ R ++L K+K+ +++ I +D
Sbjct: 349 VRRREQHLHKQKQKRISAQRRQINED 374
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 769 (275.8 bits), Expect = 3.6e-138, Sum P(2) = 3.6e-138
Identities = 159/343 (46%), Positives = 221/343 (64%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYV+DPGF KQ +N R +ESL V PISKASA Q KCFRLYT A+K E
Sbjct: 392 VYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKE 451
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L + + PEI R NL + VL LK LGI+DL+HFDF+DPP ET++ ALE+L L L+ G
Sbjct: 452 LIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLQCLSDEG 511
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
DLT LGR ++FPLDPM+ ML+ S Y C EEI+TI +MLSV +F RP AD
Sbjct: 512 DLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIVAMLSVPN-VFVRPASARKRADE 570
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFST----QWCYENFIQHRSMKRARDVREQLIGLV 1031
A+ +F GDHL L+N+Y + + S +WC +NF+ +RS+ A++VR QL L+
Sbjct: 571 AKLSFAQADGDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLM 630
Query: 1032 QRVEMELVSNPTETV------NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPN 1083
Q+ +++L+S + N++KA+ AG+F +AK KSG+ Y T K NQ V+IHP+
Sbjct: 631 QKYDLQLISQYNQVSEFEYWENVKKALVAGFFMQVAK-KKSGNKGYLTVKDNQDVLIHPS 689
Query: 1084 SSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
+ L +E W++Y+E V T+K ++R VT ++ +WL+E+AP YY
Sbjct: 690 TVLSKE-GEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKYY 731
Score = 618 (222.6 bits), Expect = 3.6e-138, Sum P(2) = 3.6e-138
Identities = 135/251 (53%), Positives = 171/251 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE + + DL YS +I+DEAHERTL TDIL GL+K + R DLK++I SATL
Sbjct: 192 MTDGMLLREAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATL 251
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF +F++AP+ +PGR PV+IYYT + DY+DA + ++LQIHAT+ GDIL+FL
Sbjct: 252 DAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFL 311
Query: 121 TGQEEIE-TCNEI-LQ-DRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP----PN-- 171
TG+EEIE C +I L+ D + R L + P+Y +LP Q KIF P P PN
Sbjct: 312 TGEEEIEDACRKISLEGDELVR-EQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGR 370
Query: 172 -ARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGV 230
RKV+++TNIAETSLTID I+YV+DPGF KQ +N R +ESL V PISKASA QRAG
Sbjct: 371 PGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGR 430
Query: 231 ITGFNPLSDFR 241
P FR
Sbjct: 431 AGRTRPGKCFR 441
Score = 312 (114.9 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 63/160 (39%), Positives = 103/160 (64%)
Query: 1146 SRAELGGDHLVLLNIYNQWADADFST----QWCYENFIQHRSMKRARDVREQLIGLVQRV 1201
S A+ GDHL L+N+Y + + S +WC +NF+ +RS+ A++VR QL L+Q+
Sbjct: 574 SFAQADGDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQKY 633
Query: 1202 EMELVSNPTETV------NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNSSL 1253
+++L+S + N++KA+ AG+F +AK KSG+ Y T K NQ V+IHP++ L
Sbjct: 634 DLQLISQYNQVSEFEYWENVKKALVAGFFMQVAK-KKSGNKGYLTVKDNQDVLIHPSTVL 692
Query: 1254 FEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
+E W++Y+E V T+K ++R VT ++ +WL+E+AP YY
Sbjct: 693 SKE-GEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKYY 731
Score = 297 (109.6 bits), Expect = 2.9e-104, Sum P(2) = 2.9e-104
Identities = 74/195 (37%), Positives = 106/195 (54%)
Query: 621 HQEQYEL--LLDNQIDFIQALSL---PGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFK 675
H +Q E L+ +Q QA L P N G + T K +I +T++ LP++ +
Sbjct: 45 HHDQGEFKGLIRHQTTAEQAQKLEDGPKNPFTGHDFTT----KYFDILKTRRDLPVHAQR 100
Query: 676 QDLIDAVRDHQVLIIEGETGSGKTTQIPQYL--HEAGFTKDKMKIGCTQPXXXXXXXXXX 733
++ + Q+++ GETGSGKTTQIPQ++ E K ++ CTQP
Sbjct: 101 EEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGK-QVACTQPRRVAAMSVAA 159
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
+EM V+LG EVGY IRFE+ + +TI+KYMTDG L RE + + DL YS +I+DEAH
Sbjct: 160 RVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHDLTRYSCIILDEAH 219
Query: 794 PKVYVID--PGFCKQ 806
+ D G KQ
Sbjct: 220 ERTLATDILMGLLKQ 234
Score = 38 (18.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1074 HNQTVMI---HPNSSLFEELPRWVLYHELVFTT 1103
H+ +M+ S ++P++VLY E+ T
Sbjct: 108 HSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLT 140
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 758 (271.9 bits), Expect = 4.3e-138, Sum P(2) = 4.3e-138
Identities = 140/338 (41%), Positives = 228/338 (67%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++V+D G+ K +N + GM++L + PIS+A+ANQ K +RLYT AYK+E
Sbjct: 474 MFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNE 533
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+ T+PEIQR +L N VL+LK+LG+ DL+ FDF+DPPP ET+ +L +L++LGAL++ G
Sbjct: 534 MYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDNLG 593
Query: 916 DLTKLGRRMAEFPLDPMMGKMLL-ASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
DLT LGR+M FP+DP + K+++ A+E+Y C EE++TI SMLSV +FYRPK++ +D
Sbjct: 594 DLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPN-VFYRPKERQEESD 652
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
AR+ FF+ DHL LL++Y QW +S WC ++F+ ++++RA++VR+QL ++
Sbjct: 653 AAREKFFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVMQ 712
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE--ELPR 1092
++ L+S T+ IRK I +G+++ A++ G + + + ++ +HP S+L+ +P
Sbjct: 713 KLPLISCGTDWDEIRKCICSGFYHQAARVKGIGEFINLRTSVSMALHPTSALYGLGYVPE 772
Query: 1093 WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1130
+V+YHEL+ T+KE+M VT ++ WL E+ +Y +E
Sbjct: 773 YVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYSVKE 810
Score = 629 (226.5 bits), Expect = 4.3e-138, Sum P(2) = 4.3e-138
Identities = 120/229 (52%), Positives = 168/229 (73%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L + DL YS +I+DEAHER L+TD+L GL+K I+ R DLKL+++SAT+
Sbjct: 284 MTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATM 343
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A++FS FF AP F IPGR FPVD+++++ P DY+D+ V +L IH +Q GDILVF+
Sbjct: 344 NAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFM 403
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQE+IE E++ +R++ L K L ILP+YS +P + Q KIF P RKV++ATN
Sbjct: 404 TGQEDIEATCELVDERLKLLNDPPK-LSILPIYSQMPAEQQAKIFERAAPGVRKVIVATN 462
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLT+D I++V+D G+ K +N + GM++L + PIS+A+ANQR+G
Sbjct: 463 IAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSG 511
Score = 355 (130.0 bits), Expect = 3.7e-109, Sum P(2) = 3.7e-109
Identities = 74/156 (47%), Positives = 97/156 (62%)
Query: 645 RDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
+D+G + K K + E ++ LP + ++DL+ +RD+QV+++ GETGSGKTTQ+ Q
Sbjct: 167 QDEGGQSSFSKSK---TLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQ 223
Query: 705 YLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIK 764
+L+E G+ K M IGCTQP EEM V LG VGYAIRFEDCT T IK
Sbjct: 224 FLYEDGYAKFGM-IGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIK 282
Query: 765 YMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
YMTDG L RE L + DL YS +I+DEAH + D
Sbjct: 283 YMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTD 318
Score = 295 (108.9 bits), Expect = 5.8e-85, Sum P(2) = 5.8e-85
Identities = 55/182 (30%), Positives = 107/182 (58%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+E ++ ++ K DHL LL++Y QW +S WC ++
Sbjct: 634 MLSVPNVFYRPKERQEESDAAREKFFVPE-----SDHLTLLHVYTQWKSNGYSDHWCTKH 688
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ ++++RA++VR+QL ++ ++ L+S T+ IRK I +G+++ A++ G +
Sbjct: 689 FLHAKTLRRAKEVRDQLNDIMVMQKLPLISCGTDWDEIRKCICSGFYHQAARVKGIGEFI 748
Query: 1238 TAKHNQTVMIHPNSSLFE--ELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ + ++ +HP S+L+ +P +V+YHEL+ T+KE+M VT ++ WL E+ +Y
Sbjct: 749 NLRTSVSMALHPTSALYGLGYVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYSV 808
Query: 1296 RE 1297
+E
Sbjct: 809 KE 810
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 744 (267.0 bits), Expect = 7.2e-137, Sum P(2) = 7.2e-137
Identities = 142/340 (41%), Positives = 218/340 (64%)
Query: 793 HPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAY 852
H YV+D G+CK +NS+ G+++L V PIS+A+ANQ +RLYT AY
Sbjct: 775 HGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAY 834
Query: 853 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN 912
E+ + T+PEIQR NL N VL+LK+LG+ ++ FDF+D PP++TL+ +L +L+ LGAL+
Sbjct: 835 IREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALD 894
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ G LT LG++M+ FP+DP + K+++ +E YKC EEI+TI SMLSV ++FYRPK++
Sbjct: 895 NFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVP-SVFYRPKERAEE 953
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQ 1032
+D AR+ F + DHL+LLNIY W +S WC ++F+ +++KRARD+R+QL+ ++
Sbjct: 954 SDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMS 1013
Query: 1033 RVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE--EL 1090
+ ++ L S + +R+ + + YF+ A G Y + +H SSL+ L
Sbjct: 1014 KQKISLESVSDWDI-VRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYL 1072
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1130
P +V+YHELV T+KE+M VT ++ WL E YY +E
Sbjct: 1073 PDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
Score = 674 (242.3 bits), Expect = 7.2e-137, Sum P(2) = 7.2e-137
Identities = 131/229 (57%), Positives = 174/229 (75%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L + +L YSV+I+DEAHER+L+TDIL GL+K ++ R D+KLL++SAT+
Sbjct: 588 MTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATM 647
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
++QKFS+FF AP F IPGR +PVDI + KAP +DY++A V +LQIH +QP GDILVF+
Sbjct: 648 NSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFM 707
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQE+IE EI+ DR+ +L + L ILP+YS +P D+Q KIF P RKVV+ATN
Sbjct: 708 TGQEDIEATCEIIADRLNQLHDAPR-LSILPIYSQMPADLQAKIFDSAEPGVRKVVVATN 766
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLT+ I YV+D G+CK +NS+ G+++L V PIS+A+ANQRAG
Sbjct: 767 IAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAG 815
Score = 359 (131.4 bits), Expect = 1.3e-103, Sum P(2) = 1.3e-103
Identities = 72/157 (45%), Positives = 103/157 (65%)
Query: 639 LSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGK 698
+ + G ++ ++ TE + K + E ++ LP + ++ L+ +RD+QVLI+ GETGSGK
Sbjct: 463 VKVAGRSEQSNKKDTEFARTK-SYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGK 521
Query: 699 TTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTS 758
TTQ+ Q+L+E G+ ++ M IGCTQP EEMGV+LG VGY+IRFED T
Sbjct: 522 TTQLAQFLYEDGYHRNGM-IGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTG 580
Query: 759 ERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
T+IKYMTDG L RE L + +L YSV+I+DEAH +
Sbjct: 581 PDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHER 617
Score = 282 (104.3 bits), Expect = 2.2e-87, Sum P(2) = 2.2e-87
Identities = 60/182 (32%), Positives = 100/182 (54%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+E + ++ K + E DHL+LLNIY W +S WC ++
Sbjct: 937 MLSVPSVFYRPKERAEESDAAREKF---NVPE--SDHLMLLNIYQHWQRNGYSNSWCSKH 991
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ +++KRARD+R+QL+ ++ + ++ L S + +R+ + + YF+ A G Y
Sbjct: 992 FLHSKTLKRARDIRQQLVEIMSKQKISLESVSDWDI-VRRVLCSAYFHQAACAKGIGEYV 1050
Query: 1238 TAKHNQTVMIHPNSSLFE--ELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +H SSL+ LP +V+YHELV T+KE+M VT ++ WL E YY
Sbjct: 1051 HLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSV 1110
Query: 1296 RE 1297
+E
Sbjct: 1111 KE 1112
Score = 50 (22.7 bits), Expect = 5.2e-71, Sum P(2) = 5.2e-71
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEE-EMTEKQ 656
++++WE+EQ + + R + E Q + N + + D+ E E EKQ
Sbjct: 274 DRQRWEEEQ--AHLDRDWYMNSESQNLLGDEVHNPFSDFETVE-----DRAHEAEFIEKQ 326
Query: 657 KKKLNIEETKK 667
KK L+IE + +
Sbjct: 327 KKHLSIEASDR 337
Score = 38 (18.4 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 999 DADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1043
D +F+ Y + R A VREQL+ +++ ++ +V T
Sbjct: 476 DTEFARTKSYR---EQREFLPAFAVREQLLSVIRDNQVLIVVGET 517
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 751 (269.4 bits), Expect = 4.6e-136, Sum P(2) = 4.6e-136
Identities = 146/333 (43%), Positives = 215/333 (64%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++V+D G+CK FN R GM++L V PIS+A+ANQ +C+RLYT A+K+E
Sbjct: 849 MFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNE 908
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+ T+PEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 909 MLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTG 968
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C +I+ I SMLSV +IFYRPK + +D
Sbjct: 969 ALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVP-SIFYRPKGREEESDQ 1027
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++S+ WC ++FI ++M++ R+VR QL ++ + +
Sbjct: 1028 VREKFSVPESDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQK 1087
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L+S ++ IRK I A YF+ AKL G Y + +HP S+LF P +
Sbjct: 1088 MNLISCGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSALFGMGYTPDY 1147
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1148 IIYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1180
Score = 662 (238.1 bits), Expect = 4.6e-136, Sum P(2) = 4.6e-136
Identities = 124/229 (54%), Positives = 171/229 (74%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 659 MTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATM 718
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D+ KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQIH + +GDIL+F+
Sbjct: 719 DSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFM 778
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + +R+ L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 779 PGQEDIEVTSDQIVERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 837
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLT+D I++V+D G+CK FN R GM++L V PIS+A+ANQRAG
Sbjct: 838 IAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAG 886
Score = 390 (142.3 bits), Expect = 4.8e-107, Sum P(3) = 4.8e-107
Identities = 79/166 (47%), Positives = 107/166 (64%)
Query: 630 DNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLI 689
D ++D+ + + E ++ KKK +E+ ++ LPI+ +Q L++ +RD+ ++I
Sbjct: 525 DGKVDYRAEQKFADHMKEKSEASSDFAKKKTLLEQ-RQYLPIFAVRQQLLNIIRDNNIVI 583
Query: 690 IEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGY 749
+ GETGSGKTTQ+ QYLHE G+T M +GCTQP EEM LG EVGY
Sbjct: 584 VVGETGSGKTTQLTQYLHEDGYTSYGM-VGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGY 642
Query: 750 AIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
AIRFEDCTSE+T+IKYMTDG L RE L E DL YS +I+DEAH +
Sbjct: 643 AIRFEDCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIMDEAHER 688
Score = 316 (116.3 bits), Expect = 2.3e-89, Sum P(2) = 2.3e-89
Identities = 65/178 (36%), Positives = 106/178 (59%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K S E DHL LN+Y QW + ++S+ WC ++
Sbjct: 1008 MLSVPSIFYRPKGREEESDQVREKF---SVPE--SDHLTYLNVYLQWKNNNYSSIWCNDH 1062
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + +M L+S ++ IRK I A YF+ AKL G Y
Sbjct: 1063 FIHTKAMRKVREVRAQLKDIMVQQKMNLISCGSDWDVIRKCICAAYFHQAAKLKGIGEYV 1122
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
+ +HP S+LF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1123 NVRTGMPCHLHPTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1180
Score = 49 (22.3 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q + IH + + + L ++ T+ + + ++ ++E+ L V P Y +
Sbjct: 754 YVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQL 813
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 814 PSDLQAKIFQKAPDGVRK 831
Score = 49 (22.3 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q + IH + + + L ++ T+ + + ++ ++E+ L V P Y +
Sbjct: 754 YVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQL 813
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 814 PSDLQAKIFQKAPDGVRK 831
Score = 47 (21.6 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K ++ E+
Sbjct: 1006 VSMLSVPSIFYRPKGREEESDQVREKFSVPES 1037
Score = 41 (19.5 bits), Expect = 4.8e-107, Sum P(3) = 4.8e-107
Identities = 19/62 (30%), Positives = 25/62 (40%)
Query: 405 PAQSYHRMTPGCTDRRTQSPCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERDEFSERLKN 464
P SY + DR+ P L K K G D D+D KE+ E +R +
Sbjct: 296 PTPSY-KYNEWANDRKHFGSTPR-LSRGKGEKREEGEGGIQFD-DEDEKEQWEEDQRQAD 352
Query: 465 RD 466
RD
Sbjct: 353 RD 354
Score = 41 (19.5 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 910 ALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEE 948
++ H G + RR A+ + M +M LA E+ + +E
Sbjct: 1181 SIKHAGKSRQENRRRAKEEITNMEEEMSLAQEQIRARKE 1219
Score = 37 (18.1 bits), Expect = 1.3e-106, Sum P(3) = 1.3e-106
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 448 SDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
S D + RD +R ++R++ ++ S + +
Sbjct: 151 SKDKNRSRDREHDRHRDRERRKDRDERESSRSR 183
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 739 (265.2 bits), Expect = 1.5e-135, Sum P(2) = 1.5e-135
Identities = 155/340 (45%), Positives = 215/340 (63%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYV+DPGF KQ +N R +ESL V PISKASA Q KCFRLYT A+K E
Sbjct: 397 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKE 456
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L D T PEI R NL + VL LK LGI+DL+HFD +DPP ETL+ ALE+L L L+ G
Sbjct: 457 LIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDG 516
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT LGR +EFPLDP + ML++S ++ C EI++I ++LSV IF RP + AD
Sbjct: 517 NLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLSVP-QIFVRPASQRKRADE 575
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFST---QWCYENFIQHRSMKRARDVREQLIGLVQ 1032
+ F GDHL LLN Y+ + + QWC+++F+ RS++ A +VR QL+ +++
Sbjct: 576 MKNLFAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIME 635
Query: 1033 RVEMELVSNPTETV----NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNSSL 1086
R E+E++S E NIR+A+ AG+F +AK G Y T K +Q V++HP++ L
Sbjct: 636 REELEMISTSFEDKKYYENIRRALCAGFFMQVAKKENQGKSMYMTIKDHQNVLLHPSTVL 695
Query: 1087 FEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
+ WVLY+E V TTK ++R VT ++ +WL+++AP YY
Sbjct: 696 AHDA-EWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPTYY 734
Score = 625 (225.1 bits), Expect = 1.5e-135, Sum P(2) = 1.5e-135
Identities = 132/251 (52%), Positives = 176/251 (70%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++ +L+ YS +I+DEAHERT+ TD+L GL+K++V+ R DLK++I SATL
Sbjct: 197 MTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATL 256
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DAQKF +F+DAP+ +PGR PV+I+YT PE DY++A + ++LQIHAT+ GDIL+FL
Sbjct: 257 DAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFL 316
Query: 121 TGQEEIE-TCNEI-LQ-DRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------ 171
TG+EEIE +I L+ D + R + L + +Y +LP MQ +IF P PP
Sbjct: 317 TGEEEIEDAARKISLEGDEMIR-EADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGR 375
Query: 172 -ARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGV 230
RKV+++TNIAETSLTID I+YV+DPGF KQ +N R +ESL V PISKASA QRAG
Sbjct: 376 PGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGR 435
Query: 231 ITGFNPLSDFR 241
P FR
Sbjct: 436 AGRTRPGKCFR 446
Score = 309 (113.8 bits), Expect = 1.1e-89, Sum P(2) = 1.1e-89
Identities = 72/221 (32%), Positives = 119/221 (53%)
Query: 1082 PNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK 1141
P L E P ++ ++ EF + LL V + +P ++ +K
Sbjct: 520 PLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQIFVRP-----ASQRKRAD 574
Query: 1142 TLGKSRAELGGDHLVLLNIYNQWADADFST---QWCYENFIQHRSMKRARDVREQLIGLV 1198
+ A GDHL LLN Y+ + + QWC+++F+ RS++ A +VR QL+ ++
Sbjct: 575 EMKNLFAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIM 634
Query: 1199 QRVEMELVSNPTETV----NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNSS 1252
+R E+E++S E NIR+A+ AG+F +AK G Y T K +Q V++HP++
Sbjct: 635 EREELEMISTSFEDKKYYENIRRALCAGFFMQVAKKENQGKSMYMTIKDHQNVLLHPSTV 694
Query: 1253 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
L + WVLY+E V TTK ++R VT ++ +WL+++AP YY
Sbjct: 695 LAHDA-EWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPTYY 734
Score = 306 (112.8 bits), Expect = 7.2e-102, Sum P(2) = 7.2e-102
Identities = 63/145 (43%), Positives = 91/145 (62%)
Query: 658 KKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY--LHEAGFTKDK 715
K +I +T++ LP++ + + + + Q+L+ GETGSGKTTQIPQ+ L + T+ K
Sbjct: 88 KYFSILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRK 147
Query: 716 MKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREF 775
M I CTQP E+ V LG EVGY+IRFED TS +T++KYMTDG L RE
Sbjct: 148 M-IACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREA 206
Query: 776 LSEPDLASYSVMIIDEAHPKVYVID 800
+++ +L+ YS +I+DEAH + D
Sbjct: 207 MNDHELSRYSTIILDEAHERTMSTD 231
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 733 (263.1 bits), Expect = 1.8e-134, Sum P(2) = 1.8e-134
Identities = 156/342 (45%), Positives = 222/342 (64%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYV+DPGF KQ +N R +ESL V PISKASA Q KCFRLYT A++ E
Sbjct: 389 VYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKE 448
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L + + PEI R NL + VL LK LGI+DL+HFDF+DPP ET++ ALE+L L L+ G
Sbjct: 449 LIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEG 508
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRP-KDKIIHAD 974
+LT LGR ++FPLDPM+ ML+ S +++C +EI+TI +MLSV +F RP KDK AD
Sbjct: 509 NLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKDKK-RAD 566
Query: 975 TARKNFFMLGGDHLVLLNIYNQW-ADADFST---QWCYENFIQHRSMKRARDVREQLIGL 1030
A+ F GDH+ LLN+Y+ + +D + +WC ++++ +RS+ A ++R QL L
Sbjct: 567 DAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERL 626
Query: 1031 VQRVEMELVSNPTETV----NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNS 1084
+ R +EL + E+ NIRKA+ +G+F +AK +SG+ Y T K NQ V+IHP++
Sbjct: 627 MNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVLIHPST 685
Query: 1085 SLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
L + WV+Y+E V T+K ++R VT + +WL+E+AP YY
Sbjct: 686 VLGHDA-EWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYY 726
Score = 621 (223.7 bits), Expect = 1.8e-134, Sum P(2) = 1.8e-134
Identities = 133/250 (53%), Positives = 175/250 (70%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE + + DL+ YS +I+DEAHERTL TDIL GL+K +V+ R DLK++I SATL
Sbjct: 191 MTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATL 250
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF +F+DAP+ +PGR +PV++YYT + DY+D+ + ++LQIHAT+ GDIL+FL
Sbjct: 251 DAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFL 310
Query: 121 TGQEEIETC-NEI-LQ-DR-VRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN----- 171
TG++EIE +I L+ D+ VR G L + P+Y +LP Q +IF P P +
Sbjct: 311 TGEDEIEDAVRKISLEGDQLVREEGCG--PLSVYPLYGSLPPHQQQRIFEPAPESHNGRP 368
Query: 172 ARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVI 231
RKVV++TNIAETSLTID I+YV+DPGF KQ +N R +ESL V PISKASA QRAG
Sbjct: 369 GRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRA 428
Query: 232 TGFNPLSDFR 241
P FR
Sbjct: 429 GRTRPGKCFR 438
Score = 310 (114.2 bits), Expect = 1.3e-101, Sum P(2) = 1.3e-101
Identities = 64/152 (42%), Positives = 95/152 (62%)
Query: 658 KKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY-LHEAGFTKDKM 716
K ++I + ++ LP++ + + + +++Q+++ GETGSGKTTQIPQ+ L + +
Sbjct: 82 KYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENT 141
Query: 717 KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
++ CTQP EEM VKLG EVGY+IRFE+ TS +TI+KYMTDG L RE +
Sbjct: 142 QVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAM 201
Query: 777 SEPDLASYSVMIIDEAHPKVYVID--PGFCKQ 806
+ DL+ YS +I+DEAH + D G KQ
Sbjct: 202 EDHDLSRYSCIILDEAHERTLATDILMGLLKQ 233
Score = 288 (106.4 bits), Expect = 4.9e-87, Sum P(2) = 4.9e-87
Identities = 59/152 (38%), Positives = 97/152 (63%)
Query: 1152 GDHLVLLNIYNQW-ADADFST---QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS 1207
GDH+ LLN+Y+ + +D + +WC ++++ +RS+ A ++R QL L+ R +EL +
Sbjct: 577 GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNT 636
Query: 1208 NPTETV----NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNSSLFEELPRWV 1261
E+ NIRKA+ +G+F +AK +SG+ Y T K NQ V+IHP++ L + WV
Sbjct: 637 TDYESPKYFDNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVLIHPSTVLGHDA-EWV 694
Query: 1262 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
+Y+E V T+K ++R VT + +WL+E+AP YY
Sbjct: 695 IYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYY 726
Score = 43 (20.2 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 597 YEQRKWED---EQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGN 644
YE K+ D + ++S F AK R + Y + DNQ I ++ G+
Sbjct: 639 YESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVLGH 689
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 737 (264.5 bits), Expect = 3.9e-132, Sum P(2) = 3.9e-132
Identities = 146/345 (42%), Positives = 214/345 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YVID G+CK +N R GM++L + PIS+A+ANQ + +RLYT YK E
Sbjct: 820 IYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDE 879
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ +L QL+ LGAL+H G
Sbjct: 880 LLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTG 939
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT LGR+MAEFPLDP +ML+ + + C E++ I SMLSV +IFYRPK + AD
Sbjct: 940 ALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVP-SIFYRPKGREDEADG 998
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F DHL LN+Y QW ++S+ WC E+FI ++M++ R+VR+QL ++ +
Sbjct: 999 VREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQN 1058
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE--ELPRW 1093
+ ++S + +RK I + YFY A+L G Y + +HP S+L+ P +
Sbjct: 1059 LSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDY 1118
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1138
V+YHEL+ T KE+M+ T ++ WL E+ P ++ +E S +K
Sbjct: 1119 VVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREK 1163
Score = 639 (230.0 bits), Expect = 3.9e-132, Sum P(2) = 3.9e-132
Identities = 122/229 (53%), Positives = 169/229 (73%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +P+L SYS +I+DEAHER+L TD+LFGL+++IV R DLKL+++SAT+
Sbjct: 630 MTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATM 689
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D+ KF+ FF + P F IPGR FPVD+ ++K DY+++ V LQ+H T GD+L+F+
Sbjct: 690 DSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFM 749
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE E+L++R+ + + L ILP+YS LP+D+Q KIF + RK V+ATN
Sbjct: 750 PGQEDIEVTCEVLEERLAEIDNA-PALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATN 808
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLT+D IIYVID G+CK +N R GM++L + PIS+A+ANQR+G
Sbjct: 809 IAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSG 857
Score = 396 (144.5 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 78/151 (51%), Positives = 106/151 (70%)
Query: 645 RDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
RD+ ++ +KK I E ++ LP++ +Q+L++ +R++ V+II GETGSGKTTQ+ Q
Sbjct: 511 RDQDTGGKSDFSRKK-TISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQ 569
Query: 705 YLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIK 764
YLHE G++K M IGCTQP +EM +LG +VGYAIRFEDCTSERT+IK
Sbjct: 570 YLHEDGYSKRGM-IGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIK 628
Query: 765 YMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
YMTDG L RE L +P+L SYS +I+DEAH +
Sbjct: 629 YMTDGILLRESLRDPELDSYSAIIMDEAHER 659
Score = 306 (112.8 bits), Expect = 8.1e-86, Sum P(2) = 8.1e-86
Identities = 62/190 (32%), Positives = 104/190 (54%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ ED + K R E DHL LN+Y QW ++S+ WC E+
Sbjct: 979 MLSVPSIFYRPKGREDEADGVREKF---QRPE--SDHLTYLNVYQQWRQNNYSSTWCNEH 1033
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR+QL ++ + + ++S + +RK I + YFY A+L G Y
Sbjct: 1034 FIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYV 1093
Query: 1238 TAKHNQTVMIHPNSSLFE--ELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP S+L+ P +V+YHEL+ T KE+M+ T ++ WL E+ P ++
Sbjct: 1094 NLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSV 1153
Query: 1296 RELEDSTNKK 1305
+E S +K
Sbjct: 1154 KESGRSGREK 1163
Score = 46 (21.3 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 595 PHYEQ-RKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMT 653
P+ E RK E++ R+ A+ R++ EL N++ ++L D +EE
Sbjct: 342 PNSEYFRKREEQLEQKRTKRISAQQRQNNRDNELWERNRMLTSGVVTLISVNDDFDEEAL 401
Query: 654 EK 655
E+
Sbjct: 402 ER 403
Score = 39 (18.8 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 449 DDDRK-ERDEFSERLKNRDKNNTKNVATSRQDKR 481
D DR +RD +R ++RD++ + R+ R
Sbjct: 157 DRDRDWDRDRRRDRDRDRDRDRDRRQHRERERDR 190
Score = 37 (18.1 bits), Expect = 2.8e-68, Sum P(3) = 2.8e-68
Identities = 5/22 (22%), Positives = 16/22 (72%)
Query: 647 KGEEEMTEKQKKKLNIEETKKS 668
K EE++ +K+ K+++ ++ + +
Sbjct: 349 KREEQLEQKRTKRISAQQRQNN 370
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 728 (261.3 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
Identities = 149/345 (43%), Positives = 224/345 (64%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID F K +N RT +ESL V PISKASA Q KCFRLYT ++ +
Sbjct: 345 VFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFE-K 403
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L ++TVPE+QR NL +L LKALGI++++ F FL PPP +++V ALE L+ALG L+ +G
Sbjct: 404 LPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLFALGGLDQYG 463
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT +G RMAEFPL PM KMLL S + C +EIVTIA+M+ + IF P ++ A
Sbjct: 464 RLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQN-IFVAPHNQRKSAA 522
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LN+Y + S+QWC ++F+ ++ + RA VREQL L+ +
Sbjct: 523 REHRKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKF 582
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRW 1093
++ S+ + I + I +G+F + A++ SGSY+T + ++ + IHP+S L+ E+ P+W
Sbjct: 583 KVPRTSSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPPKW 642
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1138
V+++E+V T+K +MR VT +ES WL+E+APH+YK + ++K+
Sbjct: 643 VVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGSLSSKR 687
Score = 599 (215.9 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
Identities = 126/242 (52%), Positives = 170/242 (70%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +S+P L YSV+I+DEAHERTL+TDI GL+K I++ R DL+L+++SATL
Sbjct: 142 LTDGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATL 201
Query: 61 DAQKFSEFFD-----DAP-----VFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+KF +FF+ DA + + GR FPVDI+YT +P DY+ A V ++L+IH T
Sbjct: 202 DAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHET 261
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GD+L FLTGQEE+E +LQ++ R R G K K L +LP+Y+ LP + Q ++F
Sbjct: 262 EDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMK-KHLCVLPMYAGLPYNEQMRVFER 320
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
P RKVV+ATNIAETS+TI+ +++VID F K +N RT +ESL V PISKASA QR
Sbjct: 321 MAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQR 380
Query: 228 AG 229
AG
Sbjct: 381 AG 382
Score = 324 (119.1 bits), Expect = 1.9e-88, Sum P(2) = 1.9e-88
Identities = 59/155 (38%), Positives = 104/155 (67%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LN+Y + S+QWC ++F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 533 GDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSEGD 592
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTT 1270
I + I +G+F + A++ SGSY+T + ++ + IHP+S L+ E+ P+WV+++E+V T+
Sbjct: 593 PDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPPKWVVFNEVVQTS 652
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1305
K +MR VT +ES WL+E+APH+YK + ++K+
Sbjct: 653 KYYMRDVTAVESSWLVELAPHFYKQAKHGSLSSKR 687
Score = 322 (118.4 bits), Expect = 2.4e-102, Sum P(2) = 2.4e-102
Identities = 65/142 (45%), Positives = 88/142 (61%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L IE+ ++ LP++ + +++ V Q ++I GETGSGK+TQIPQYL EAG+ + IG
Sbjct: 35 LTIEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIG 94
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSER-TIIKYMTDGTLHREFLSE 778
TQP EE G LG EVGY IRF+DC+ T IK++TDG L RE +S+
Sbjct: 95 VTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSD 154
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YSV+I+DEAH + D
Sbjct: 155 PLLKKYSVLILDEAHERTLYTD 176
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 724 (259.9 bits), Expect = 1.1e-129, Sum P(2) = 1.1e-129
Identities = 145/334 (43%), Positives = 219/334 (65%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQ KC+RLYT A++ +
Sbjct: 355 VYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFE-Q 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL VL LKALGI+ ++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + +F P ++ A
Sbjct: 474 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVFPSNQKSQAT 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LN+Y + + S+QWC E+F+ ++ + RA VR+QL L+ +
Sbjct: 533 RVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRW 1093
++ +S+ + + + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRW
Sbjct: 593 QVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRW 652
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
V+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 653 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 585 (211.0 bits), Expect = 1.1e-129, Sum P(2) = 1.1e-129
Identities = 123/242 (50%), Positives = 167/242 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+KF +FF D + + GR FPVDI+Y ++P DYI A V ++++IH T
Sbjct: 212 DAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GDIL FLTGQEE+ET +L ++ R R G K K L +LP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDILAFLTGQEEVETVVSMLIEQARALARTGMK-KHLRVLPMYAGLPSFEQMKVFER 330
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQR
Sbjct: 331 VSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQR 390
Query: 228 AG 229
AG
Sbjct: 391 AG 392
Score = 320 (117.7 bits), Expect = 1.6e-86, Sum P(2) = 1.6e-86
Identities = 61/162 (37%), Positives = 106/162 (65%)
Query: 1135 TNKKMPKT-LGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQ 1193
+N+K T + + A GDHL +LN+Y + + S+QWC E+F+ ++ + RA VR+Q
Sbjct: 525 SNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQ 584
Query: 1194 LIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL 1253
L L+ + ++ +S+ + + + I +G+F + A+ +G+Y+T + + + IHP S L
Sbjct: 585 LKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVL 644
Query: 1254 F-EELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
+ E+ PRWV+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 645 YAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 317 (116.6 bits), Expect = 2.3e-101, Sum P(2) = 2.3e-101
Identities = 61/142 (42%), Positives = 89/142 (62%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ V ++Q ++I GETG GK+TQ+PQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQP +E G LG EVGY IRF+DCT T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YSV+++DEAH + D
Sbjct: 165 PLLTKYSVVMLDEAHERTLYTD 186
Score = 39 (18.8 bits), Expect = 4.8e-72, Sum P(2) = 4.8e-72
Identities = 18/82 (21%), Positives = 35/82 (42%)
Query: 209 TGMESL-TVVP--ISKASANQRAGVITGFNPLSDFRGCAHVLGEEVLRGCAHVLGEEVLR 265
TG E + TVV I +A A R G+ L + G +V +H + + ++
Sbjct: 282 TGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVA 341
Query: 266 PEVSQPFRSFGYLGVMQDCRYI 287
V++ + + + DC ++
Sbjct: 342 TNVAETSITISGIVYVIDCGFM 363
Score = 38 (18.4 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 82 FPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIET 128
FP++ + K C IL I A + ++ VF + Q+ T
Sbjct: 486 FPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQAT 532
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 697 (250.4 bits), Expect = 2.5e-129, Sum P(2) = 2.5e-129
Identities = 134/335 (40%), Positives = 210/335 (62%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K FN + G++SL ++PISKASA Q KC+RLYT ++ +L
Sbjct: 376 YVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFE-KL 434
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ +++PEI+R N+ N +L LK +GIND++ FDFL+ PP +++ +LE L+ L A++ +G
Sbjct: 435 DTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIKSLELLFCLDAISDNGS 494
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT+LG++MA FPLDPM K L+ S +++C EE++ I S+LSV +IF+ PK+K +
Sbjct: 495 LTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVE-SIFFTPKEKKKEVEDV 553
Query: 977 RKNFFMLGGDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+K FF GDH+ LN++ ++ + QWC+++FI +SM + +V EQL+ +
Sbjct: 554 KKIFFSPDGDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISL 613
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWV 1094
++ +VS ++ I+K+ G+F + A L YKT N+ + IHP S LF++ P+ +
Sbjct: 614 KLPIVSCGSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFDQKPQHI 673
Query: 1095 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPR 1129
LY+EL TTK F R + IE WL E+ P YY R
Sbjct: 674 LYNELTITTKAFARNIIPIEGSWLAEICPKYYGTR 708
Score = 610 (219.8 bits), Expect = 2.5e-129, Sum P(2) = 2.5e-129
Identities = 126/244 (51%), Positives = 172/244 (70%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFR---SDLKLLISS 57
MTDG L RE + + L+ YSV+I+DEAHERTL+TD+LFGL+K I + R + LK++I S
Sbjct: 169 MTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMS 228
Query: 58 ATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT------- 110
ATLDA+ FS++F++APV I GR+FPV IYYT+ + DY+DA ++++LQIH
Sbjct: 229 ATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSI 288
Query: 111 -----QPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIF 165
+ GDILVFLTG++EIE ++L DR+ RL K+LI+ P++S LP + Q K+F
Sbjct: 289 NKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVF 348
Query: 166 LPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASAN 225
P +RKV+LATNIAETSLTI+ I YV+D G K FN + G++SL ++PISKASA
Sbjct: 349 EKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAK 408
Query: 226 QRAG 229
QR G
Sbjct: 409 QRTG 412
Score = 329 (120.9 bits), Expect = 1.2e-99, Sum P(2) = 1.2e-99
Identities = 68/157 (43%), Positives = 100/157 (63%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIP 703
N K + E+ ++ K++ ++ K+SLP++ K L+ ++H +II ETG+GKTTQIP
Sbjct: 50 NNLKNQLEIPKEIPKEIKLQ--KESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIP 107
Query: 704 QYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTII 763
QYL+E G+ KD I TQP +EMGV+LG +VGY +RF+D T+E+T +
Sbjct: 108 QYLYENGY-KDNGIIAITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKL 166
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
KYMTDG L RE + + L+ YSV+I+DEAH + D
Sbjct: 167 KYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTD 203
Score = 285 (105.4 bits), Expect = 1.6e-85, Sum P(2) = 1.6e-85
Identities = 66/206 (32%), Positives = 109/206 (52%)
Query: 1095 LYHELVFTTKEF--MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGG 1152
+Y + + + EF +V I S +L V ++ P+E KK + + K G
Sbjct: 510 MYSKTLIKSIEFECSEEVLIIIS--ILSVESIFFTPKE-----KKKEVEDVKKIFFSPDG 562
Query: 1153 DHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
DH+ LN++ ++ + QWC+++FI +SM + +V EQL+ +++ +VS +
Sbjct: 563 DHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIVSCGS 622
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTT 1270
+ I+K+ G+F + A L YKT N+ + IHP S LF++ P+ +LY+EL TT
Sbjct: 623 DFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFDQKPQHILYNELTITT 682
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPR 1296
K F R + IE WL E+ P YY R
Sbjct: 683 KAFARNIIPIEGSWLAEICPKYYGTR 708
Score = 40 (19.1 bits), Expect = 9.2e-25, Sum P(2) = 9.2e-25
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 1141 KTLGKSRAELGGDHLVLL 1158
K++ K E GGD LV L
Sbjct: 286 KSINKEEEEDGGDILVFL 303
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 722 (259.2 bits), Expect = 6.4e-129, Sum P(2) = 6.4e-129
Identities = 145/334 (43%), Positives = 219/334 (65%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQ KC+RLYT A+ +
Sbjct: 355 VYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFD-Q 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + +F P ++ A
Sbjct: 474 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVVPSNQKSQAI 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
A + F + GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ +
Sbjct: 533 RAHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRW 1093
++ S+ + + + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRW
Sbjct: 593 QVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRW 652
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
V+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 653 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 580 (209.2 bits), Expect = 6.4e-129, Sum P(2) = 6.4e-129
Identities = 121/241 (50%), Positives = 166/241 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YS +++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 212 DAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLGSK-IKE-LIILPVYSNLPTDMQTKIFLPT 168
+ GDIL FLTGQEE+ET +L ++ R LG +K L ILP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYAGLPSFEQMKVFERV 331
Query: 169 PPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRA 228
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQRA
Sbjct: 332 SRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 391
Query: 229 G 229
G
Sbjct: 392 G 392
Score = 316 (116.3 bits), Expect = 4.8e-101, Sum P(2) = 4.8e-101
Identities = 61/142 (42%), Positives = 89/142 (62%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ + ++Q ++I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQP EE G LG EVGY IRF+DCT+ T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YS +++DEAH + D
Sbjct: 165 PLLTKYSAIMLDEAHERTLYTD 186
Score = 316 (116.3 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 57/144 (39%), Positives = 97/144 (67%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 543 GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGD 602
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTT 1270
+ + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRWV+Y+E++ T+
Sbjct: 603 PDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTS 662
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYK 1294
K +MR VT IES WLLE+APH+Y+
Sbjct: 663 KYYMRDVTAIESAWLLELAPHFYQ 686
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 728 (261.3 bits), Expect = 9.8e-129, Sum P(2) = 9.8e-129
Identities = 158/372 (42%), Positives = 229/372 (61%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I H YVID GF K +N +T +E L VVP+SKASANQ
Sbjct: 336 RKVIVATNVAETSITI----HGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRA 391
Query: 833 XXXXXXXXXKCFRLYTAWAYKHE-LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLD 891
KC+RLYTA E L +TVPE+QR NL +L LKALGI++++ F FL
Sbjct: 392 GRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLS 451
Query: 892 PPPHETLVLALEQLYALGALNHHGDLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
PPP +++V ALE LYALG L+ H LT+ LG R+AEFPL+PM KMLL S + C +EI+
Sbjct: 452 PPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEIL 511
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYEN 1010
TIA+M+ + IF P ++ A + F + GDHL +LN+Y + S+QWC E+
Sbjct: 512 TIAAMMQIQN-IFLIPPNQKSQAARQHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEH 570
Query: 1011 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1070
F+ ++ + RA VREQL L+ ++ S+ + + + I +G+F + AK +G+Y+
Sbjct: 571 FLNYKGLVRASVVREQLKKLLVCFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHSTGAYR 630
Query: 1071 TAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPR 1129
T + + + IHP S L+ E+ PRWV+Y+E++ T K +MR VT IES WL+E+APH+Y+ +
Sbjct: 631 TIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTAKYYMRDVTAIESAWLVELAPHFYQ-Q 689
Query: 1130 ELEDSTNKKMPK 1141
S N K K
Sbjct: 690 GTHLSLNAKRAK 701
Score = 572 (206.4 bits), Expect = 9.8e-129, Sum P(2) = 9.8e-129
Identities = 120/242 (49%), Positives = 166/242 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +++P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+KF +FF D + + + GR FPVDI+Y ++P DYI + V + ++IH
Sbjct: 212 DAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQM 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GDIL FLTGQEE+ET +L ++ R R G + K L +LP+Y+ LP+ Q K+F
Sbjct: 272 ENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMR-KHLRVLPMYAGLPSPDQMKVFER 330
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
+ RKV++ATN+AETS+TI I YVID GF K +N +T +E L VVP+SKASANQR
Sbjct: 331 VSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQR 390
Query: 228 AG 229
AG
Sbjct: 391 AG 392
Score = 326 (119.8 bits), Expect = 9.3e-103, Sum P(2) = 9.3e-103
Identities = 63/142 (44%), Positives = 90/142 (63%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ V +Q L+I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTS-ERTIIKYMTDGTLHREFLSE 778
TQP +E G LG EVGY IRF+DCT + T IK++TDG L RE +++
Sbjct: 105 VTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMAD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YSV+++DEAH + D
Sbjct: 165 PLLTRYSVLMLDEAHERTLYTD 186
Score = 312 (114.9 bits), Expect = 2.9e-84, Sum P(2) = 2.9e-84
Identities = 62/158 (39%), Positives = 99/158 (62%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LN+Y + S+QWC E+F+ ++ + RA VREQL L+ ++ S+ +
Sbjct: 545 GDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPKKSSEGD 604
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTT 1270
+ + I +G+F + AK +G+Y+T + + + IHP S L+ E+ PRWV+Y+E++ T
Sbjct: 605 PDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTA 664
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK 1308
K +MR VT IES WL+E+APH+Y+ + S N K K
Sbjct: 665 KYYMRDVTAIESAWLVELAPHFYQ-QGTHLSLNAKRAK 701
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 716 (257.1 bits), Expect = 1.8e-128, Sum P(2) = 1.8e-128
Identities = 145/334 (43%), Positives = 217/334 (64%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQ KC+RLYT A+ +
Sbjct: 355 VYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFD-Q 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + IF P ++ A
Sbjct: 474 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPSNQKSQAI 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ +
Sbjct: 533 RVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRW 1093
++ S+ + + + I +G+F + A+ +G Y+T + + + IHP S L+ E+ PRW
Sbjct: 593 QVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGVYRTIRDDHELHIHPASVLYAEKPPRW 652
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
V+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 653 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 582 (209.9 bits), Expect = 1.8e-128, Sum P(2) = 1.8e-128
Identities = 121/241 (50%), Positives = 169/241 (70%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YS +++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFFD-----DAP-----VFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+KF +FF+ D P + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 212 DAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLG-SKIKE-LIILPVYSNLPTDMQTKIFLPT 168
+ GDIL FLTGQEE+ET +L ++ R LG + +K L +LP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERV 331
Query: 169 PPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRA 228
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQRA
Sbjct: 332 SRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 391
Query: 229 G 229
G
Sbjct: 392 G 392
Score = 316 (116.3 bits), Expect = 2.2e-100, Sum P(2) = 2.2e-100
Identities = 61/142 (42%), Positives = 88/142 (61%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ + ++Q ++I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQP EE G LG EVGY IRF+DCT T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YS +++DEAH + D
Sbjct: 165 PLLTKYSAIMLDEAHERTLYTD 186
Score = 313 (115.2 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 57/144 (39%), Positives = 96/144 (66%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 543 GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGD 602
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTT 1270
+ + I +G+F + A+ +G Y+T + + + IHP S L+ E+ PRWV+Y+E++ T+
Sbjct: 603 PDPVLRCIVSGFFANAARFHSTGVYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTS 662
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYK 1294
K +MR VT IES WLLE+APH+Y+
Sbjct: 663 KYYMRDVTAIESAWLLELAPHFYQ 686
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 720 (258.5 bits), Expect = 2.2e-128, Sum P(2) = 2.2e-128
Identities = 146/334 (43%), Positives = 218/334 (65%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQ KC+RLYT A+ +
Sbjct: 355 VYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFD-K 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + IF P ++ HA
Sbjct: 474 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPPNQKSHAI 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LNIY + + ++WC E+F+ ++ + RA VREQL L+ +
Sbjct: 533 RVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRW 1093
++ S+ + + + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRW
Sbjct: 593 QVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRW 652
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
V+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 653 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 577 (208.2 bits), Expect = 2.2e-128, Sum P(2) = 2.2e-128
Identities = 120/242 (49%), Positives = 166/242 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GD+L FLTGQEE+ET +L ++ R R G K + L +LP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFER 330
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQR
Sbjct: 331 VSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQR 390
Query: 228 AG 229
AG
Sbjct: 391 AG 392
Score = 323 (118.8 bits), Expect = 1.5e-101, Sum P(2) = 1.5e-101
Identities = 62/142 (43%), Positives = 90/142 (63%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ + ++Q ++I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQP EE G LG EVGY IRF+DCT + T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YSV+++DEAH + D
Sbjct: 165 PLLTKYSVIMLDEAHERTLYTD 186
Score = 311 (114.5 bits), Expect = 1.1e-84, Sum P(2) = 1.1e-84
Identities = 57/144 (39%), Positives = 96/144 (66%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LNIY + + ++WC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 543 GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGD 602
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTT 1270
+ + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRWV+Y+E++ T+
Sbjct: 603 PDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTS 662
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYK 1294
K +MR VT IES WLLE+APH+Y+
Sbjct: 663 KYYMRDVTAIESAWLLELAPHFYQ 686
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 720 (258.5 bits), Expect = 2.2e-128, Sum P(2) = 2.2e-128
Identities = 146/334 (43%), Positives = 218/334 (65%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQ KC+RLYT A+ +
Sbjct: 324 VYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFD-K 382
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 383 LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 442
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + IF P ++ HA
Sbjct: 443 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPPNQKSHAI 501
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LNIY + + ++WC E+F+ ++ + RA VREQL L+ +
Sbjct: 502 RVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKF 561
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRW 1093
++ S+ + + + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRW
Sbjct: 562 QVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRW 621
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
V+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 622 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 655
Score = 577 (208.2 bits), Expect = 2.2e-128, Sum P(2) = 2.2e-128
Identities = 120/242 (49%), Positives = 166/242 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 121 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 180
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 181 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQT 240
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GD+L FLTGQEE+ET +L ++ R R G K + L +LP+Y+ LP+ Q K+F
Sbjct: 241 EGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFER 299
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQR
Sbjct: 300 VSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQR 359
Query: 228 AG 229
AG
Sbjct: 360 AG 361
Score = 311 (114.5 bits), Expect = 1.1e-84, Sum P(2) = 1.1e-84
Identities = 57/144 (39%), Positives = 96/144 (66%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LNIY + + ++WC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 512 GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGD 571
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-EELPRWVLYHELVFTT 1270
+ + I +G+F + A+ +G+Y+T + + + IHP S L+ E+ PRWV+Y+E++ T+
Sbjct: 572 PDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTS 631
Query: 1271 KEFMRQVTEIESKWLLEVAPHYYK 1294
K +MR VT IES WLLE+APH+Y+
Sbjct: 632 KYYMRDVTAIESAWLLELAPHFYQ 655
Score = 213 (80.0 bits), Expect = 1.4e-91, Sum P(3) = 1.4e-91
Identities = 44/98 (44%), Positives = 58/98 (59%)
Query: 704 QYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTI 762
+YL EAG+T + +G TQP EE G LG EVGY IRF+DCT + T
Sbjct: 58 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 117
Query: 763 IKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
IK++TDG L RE + +P L YSV+++DEAH + D
Sbjct: 118 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTD 155
Score = 37 (18.1 bits), Expect = 1.4e-91, Sum P(3) = 1.4e-91
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 660 LNIEETKKSLPIYPF 674
L+IE+ ++ LP++ +
Sbjct: 45 LSIEQQRQKLPVFKY 59
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 743 (266.6 bits), Expect = 2.8e-124, Sum P(2) = 2.8e-124
Identities = 150/242 (61%), Positives = 183/242 (75%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFL++ L+ YS ++IDEAHERTL TDIL GL+KDI+ R LKLLISSAT+
Sbjct: 322 MTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATM 381
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVF 119
+A+KFSEFFD+ P+F +PGRR+PVDI+YT PEA+YI A + +I QIH TQ L GDILVF
Sbjct: 382 NAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVF 441
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
LTGQEEIE L++ + +LGS+ K++II P+Y+NLP + Q KIF PTP N RKVVLAT
Sbjct: 442 LTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLAT 501
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
NIAETSLTID I YVIDPGF K+N++ TGM L VP S+AS +QRAG P
Sbjct: 502 NIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKC 561
Query: 240 FR 241
FR
Sbjct: 562 FR 563
Score = 514 (186.0 bits), Expect = 2.8e-124, Sum P(2) = 2.8e-124
Identities = 119/308 (38%), Positives = 171/308 (55%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPGF K+N++ TGM L VP S+AS +Q KCFR++T W+Y HEL
Sbjct: 515 YVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHEL 574
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E PEI R NL N VL+L +LG+ DLI F +D P TL +LE LY LGALN G
Sbjct: 575 ELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGT 634
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYK-C---VEEIVTIASMLSVNGAIFYRPKDKIIH 972
+T+LG+ M EFP +P K+L + ++ C +EE +TI SML ++F K
Sbjct: 635 ITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIGQK----- 689
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQL----- 1027
D A + DH++ L I+NQW ++ FS WC ++ IQ ++M R R++R QL
Sbjct: 690 RDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSE 749
Query: 1028 -IGLVQRVEMEL--VSNPTETVNIR--KAITAGYFYHIAKLSKSGSYKTAKHNQ---TVM 1079
+GLV++ + + N +N R + +G+ +I +L +G Y+T + V
Sbjct: 750 KVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVS 808
Query: 1080 IHPNSSLF 1087
+HP S LF
Sbjct: 809 VHPTSILF 816
Score = 393 (143.4 bits), Expect = 4.6e-82, Sum P(2) = 4.6e-82
Identities = 89/218 (40%), Positives = 131/218 (60%)
Query: 599 QRKWEDEQMSSAIFRVGAKDR------EHQEQYELLLDNQ--IDFIQALS--LPGNRDKG 648
QR WE++Q+ +A+ G D E ++Y+ + D ID+ LP + +
Sbjct: 141 QRMWEEQQLRNAM--AGQSDHPDDITLEGSDKYDYVFDTDAMIDYTNEEDDLLPEEKLQY 198
Query: 649 EEEMTE----KQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
E + + ++K+ L I+E +K LP++ +K +L+ ++ +QVLII GETGSGKTTQ+PQ
Sbjct: 199 EARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQ 258
Query: 705 YLHEAGFT-KDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTS-ERTI 762
YL E GFT + K++I TQP +EM V LG EVGY IRFED T+ +T+
Sbjct: 259 YLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTV 318
Query: 763 IKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
+KYMTDG L REFL++ L+ YS ++IDEAH + D
Sbjct: 319 LKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATD 356
Score = 159 (61.0 bits), Expect = 8.4e-87, Sum P(2) = 8.4e-87
Identities = 38/120 (31%), Positives = 66/120 (55%)
Query: 1148 AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQL------IGLVQRV 1201
+E+ DH++ L I+NQW ++ FS WC ++ IQ ++M R R++R QL +GLV++
Sbjct: 698 SEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKN 757
Query: 1202 EMEL--VSNPTETVNIR--KAITAGYFYHIAKLSKSGSYKTAKHNQ---TVMIHPNSSLF 1254
+ + N +N R + +G+ +I +L +G Y+T + V +HP S LF
Sbjct: 758 DQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVSVHPTSILF 816
Score = 132 (51.5 bits), Expect = 5.9e-84, Sum P(2) = 5.9e-84
Identities = 54/214 (25%), Positives = 103/214 (48%)
Query: 946 VEEIVTIASMLSVNGAIFYRPK-DKIIHADTARKNFFMLGGDHLVLLNIYNQ------WA 998
+EE +TI SML ++F K D + ++ +L +L + N + W
Sbjct: 668 LEECLTIVSMLHETPSLFIGQKRDAAASVLSEVESDHIL---YLEIFNQWRNSKFSRSWC 724
Query: 999 DADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL--VSNPTETVNIR--KAITA 1054
D Q ++ ++ R+++ + +GLV++ + + N +N R + +
Sbjct: 725 Q-DHKIQ--FKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFIS 781
Query: 1055 GYFYHIAKLSKSGSYKTAKHNQ---TVMIHPNSSLF----EELPR---WVLYHELVFTTK 1104
G+ +I +L +G Y+T + V +HP S LF E+ R +VLY +L+ T+K
Sbjct: 782 GFPMNIVQLGPTG-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSK 840
Query: 1105 EFMRQVTEI-ESKWLLEVAPHYYKPRELEDSTNK 1137
EF+R I + +WL+++ P +K ++D TN+
Sbjct: 841 EFIRDCLVIPKEEWLIDMVPQIFKDL-IDDKTNR 873
Score = 126 (49.4 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 38/145 (26%), Positives = 76/145 (52%)
Query: 1175 YENFIQHRSMKRARDVREQLIGLVQRVEMEL--VSNPTETVNIR--KAITAGYFYHIAKL 1230
++ ++ R+++ + +GLV++ + + N +N R + +G+ +I +L
Sbjct: 731 FKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQL 790
Query: 1231 SKSGSYKTAKHNQ---TVMIHPNSSLF----EELPR---WVLYHELVFTTKEFMRQVTEI 1280
+G Y+T + V +HP S LF E+ R +VLY +L+ T+KEF+R I
Sbjct: 791 GPTG-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVI 849
Query: 1281 -ESKWLLEVAPHYYKPRELEDSTNK 1304
+ +WL+++ P +K ++D TN+
Sbjct: 850 PKEEWLIDMVPQIFKDL-IDDKTNR 873
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 868 (310.6 bits), Expect = 4.0e-124, Sum P(3) = 4.0e-124
Identities = 170/381 (44%), Positives = 244/381 (64%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D + YVIDPGF KQ ++ + GM+SL V PIS+A A Q
Sbjct: 845 RKVVIATNIAETSITI-DNIY---YVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRA 900
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDP 892
KCFRLYT AY+ E+ T+P+IQR NL + +LMLKA+GINDL+HFDF+DP
Sbjct: 901 GRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDP 960
Query: 893 PPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTI 952
PP T++ ALE+LYAL AL+ G LT+LGR+MA+FP++P + K+L+AS C EE+++I
Sbjct: 961 PPTNTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSI 1020
Query: 953 ASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFI 1012
+MLS+ ++FYRPK+K AD + F GDHL LLN+YN W + FS WCYENFI
Sbjct: 1021 VAMLSIQ-SVFYRPKEKQQQADQKKAKFHDPHGDHLTLLNVYNAWKRSGFSNAWCYENFI 1079
Query: 1013 QHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTA 1072
Q R ++RA+DVR+QL+G++QR ++VS T +R+A+ G+F + A+ YKT
Sbjct: 1080 QARQIRRAQDVRQQLLGIMQRYHHKIVSCGRNTTKVRQALCTGFFRNSARKDPQEGYKTL 1139
Query: 1073 KHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELE 1132
V +HP+S++F + V+YH LV TTKE+M T IE KWL+E AP ++K +
Sbjct: 1140 VEGTPVYMHPSSAMFGKPAEHVIYHTLVLTTKEYMHCTTGIEPKWLVEAAPTFFKVAPTD 1199
Query: 1133 DSTNKKMPKTLGKSRAELGGD 1153
+ +K + + G+
Sbjct: 1200 RLSKRKKAERIQPLHNRFAGE 1220
Score = 764 (274.0 bits), Expect = 2.2e-108, Sum P(2) = 2.2e-108
Identities = 144/241 (59%), Positives = 188/241 (78%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL YSV+++DEAHERT+ TD+LFGL+K ++ R DL+L+++SATL
Sbjct: 673 MTDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATL 732
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFSE+F P+F IPGR FPV+I Y+K PE+DY+DA +++++QIH T+P GD+L+FL
Sbjct: 733 DADKFSEYFYGCPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFL 792
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + EL+ILPVYS LP++MQ++IF P PP RKVV+ATN
Sbjct: 793 TGQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATN 852
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETS+TIDNI YVIDPGF KQ ++ + GM+SL V PIS+A A QRAG P F
Sbjct: 853 IAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCF 912
Query: 241 R 241
R
Sbjct: 913 R 913
Score = 399 (145.5 bits), Expect = 4.0e-124, Sum P(3) = 4.0e-124
Identities = 76/145 (52%), Positives = 102/145 (70%)
Query: 656 QKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK 715
++ ++I++ ++SLP+Y F+Q L++AV ++Q+LI+ G+TGSGKTTQ+ QYL EAG+ +K
Sbjct: 564 KRTNMSIKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWA-NK 622
Query: 716 MKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREF 775
IGCTQP EE+G KLG EVGY IRFEDCTS T IKYMTDG L RE
Sbjct: 623 GIIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREV 682
Query: 776 LSEPDLASYSVMIIDEAHPKVYVID 800
L +PDL YSV+++DEAH + D
Sbjct: 683 LLDPDLKKYSVIMLDEAHERTIATD 707
Score = 385 (140.6 bits), Expect = 2.2e-108, Sum P(2) = 2.2e-108
Identities = 74/188 (39%), Positives = 113/188 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L + +Y+P+E + ++K K + GDHL LLN+YN W + FS WCYEN
Sbjct: 1023 MLSIQSVFYRPKEKQQQADQKKAKF-----HDPHGDHLTLLNVYNAWKRSGFSNAWCYEN 1077
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ R ++RA+DVR+QL+G++QR ++VS T +R+A+ G+F + A+ YK
Sbjct: 1078 FIQARQIRRAQDVRQQLLGIMQRYHHKIVSCGRNTTKVRQALCTGFFRNSARKDPQEGYK 1137
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T V +HP+S++F + V+YH LV TTKE+M T IE KWL+E AP ++K
Sbjct: 1138 TLVEGTPVYMHPSSAMFGKPAEHVIYHTLVLTTKEYMHCTTGIEPKWLVEAAPTFFKVAP 1197
Query: 1298 LEDSTNKK 1305
+ + +K
Sbjct: 1198 TDRLSKRK 1205
Score = 42 (19.8 bits), Expect = 4.0e-124, Sum P(3) = 4.0e-124
Identities = 22/83 (26%), Positives = 30/83 (36%)
Query: 447 DSDDDRKERDEFS--ERLKNRDKNNTKNVATSRQ-DKRXXXXXXX---XXXXXXXSRDKI 500
D+ D + D F+ E L + + T + SR KR RD+
Sbjct: 145 DAKDSAMD-DTFAMLEGLAGKARAKTTTITESRPVSKRKRSRSRSPEYDDYSRRRRRDRY 203
Query: 501 IPKLRIESRRKYLEKRKEDKVAE 523
+ R SR KR ED V E
Sbjct: 204 RSRSRSRSRSPAYNKRDEDPVDE 226
Score = 40 (19.1 bits), Expect = 5.4e-72, Sum P(2) = 5.4e-72
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 1285 LLEVAPHYYKPRELEDSTNKKMPK 1308
+L + +Y+P+E + ++K K
Sbjct: 1023 MLSIQSVFYRPKEKQQQADQKKAK 1046
Score = 38 (18.4 bits), Expect = 5.5e-29, Sum P(3) = 5.5e-29
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVID----PGFCKQNNFNSRTGMESLTV 820
R+F + DL S DEA P+ + P F K+ N + + ESL V
Sbjct: 530 RKFAA--DLRSTQQTGTDEAVPEWKRVTMGKTPSFGKRTNMSIKQQRESLPV 579
Score = 37 (18.1 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 749 YAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
Y++ D ERTI + G L PDL
Sbjct: 691 YSVIMLDEAHERTIATDVLFGLLKTTLKRRPDL 723
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 706 (253.6 bits), Expect = 5.3e-124, Sum P(2) = 5.3e-124
Identities = 148/350 (42%), Positives = 209/350 (59%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VID G+CK + G L ++ I K N +C RLYT AYK+E
Sbjct: 818 MFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKN-INTGCSGCTSPRCCRLYTQSAYKNE 876
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 877 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 936
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 937 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 995
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 996 IREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 1055
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 1056 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 1115
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST--NKKMPK 1141
++YHELV TTKE+M+ VT ++ +WL E+ P +Y ++ S N++ K
Sbjct: 1116 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAK 1165
Score = 596 (214.9 bits), Expect = 5.3e-124, Sum P(2) = 5.3e-124
Identities = 113/229 (49%), Positives = 158/229 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 687
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 688 DAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 747
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 748 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 806
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETSLT+D I++VID G+CK + G L ++ I K N G
Sbjct: 807 IAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTG 855
Score = 410 (149.4 bits), Expect = 1.4e-103, Sum P(4) = 1.4e-103
Identities = 88/182 (48%), Positives = 114/182 (62%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
+G K E ++ L D ++D+ + K E +E KKK +I E ++ LPI+
Sbjct: 479 MGVKKEEEPDK-SLTEDGKVDYRTEQKFADHMKKKSEASSEFAKKK-SILEQRQYLPIFA 536
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
+Q+L+ +RD+ ++I+ GETGSGKTTQ+ QYLHE G+T D IGCTQP
Sbjct: 537 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPRRVAAMSVAK 595
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEMG LG EVGYAIRFEDCTSE T+IKYMTDG L RE L E DL YS +I+DEAH
Sbjct: 596 RVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAH 655
Query: 794 PK 795
+
Sbjct: 656 ER 657
Score = 319 (117.4 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
Identities = 69/195 (35%), Positives = 110/195 (56%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 976 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLSYLNVYLQWKNNNYSTIWCNDH 1030
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 1031 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 1090
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1091 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1150
Query: 1296 RELEDST--NKKMPK 1308
++ S N++ K
Sbjct: 1151 KQAGKSRQENRRRAK 1165
Score = 48 (22.0 bits), Expect = 6.0e-32, Sum P(4) = 6.0e-32
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 723 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 782
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 783 PSDLQAKIFQKAPDGVRK 800
Score = 48 (22.0 bits), Expect = 6.0e-32, Sum P(4) = 6.0e-32
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 723 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 782
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 783 PSDLQAKIFQKAPDGVRK 800
Score = 43 (20.2 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 974 VSMLSVPAIFYRPKGREEESDQIREKFAVPES 1005
Score = 42 (19.8 bits), Expect = 1.4e-103, Sum P(4) = 1.4e-103
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 447 DSDDDRKER--DEFSERLKNRD-KNNTKNVATSRQD 479
D D +KER D +R ++RD ++ +++ S +D
Sbjct: 150 DEKDRKKERSRDRDCDRKRDRDERDRSRHSGRSERD 185
Score = 38 (18.4 bits), Expect = 5.6e-65, Sum P(3) = 5.6e-65
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQK 657
E+++WED+Q A D + E + L + D+++ ++ K ++ Q+
Sbjct: 311 ERQQWEDDQRQ-ADRDWYMMDEGYDEFHNPLAYSSDDYVRRREQHLHKQK--QKRISAQR 367
Query: 658 KKLNIEETKK 667
+++N E+ ++
Sbjct: 368 RQIN-EDNER 376
Score = 37 (18.1 bits), Expect = 1.4e-103, Sum P(4) = 1.4e-103
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 506 IESRRKYLEKRKEDKVAELEADILDD 531
+ R ++L K+K+ +++ I +D
Sbjct: 348 VRRREQHLHKQKQKRISAQRRQINED 373
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 867 (310.3 bits), Expect = 7.0e-124, Sum P(3) = 7.0e-124
Identities = 165/366 (45%), Positives = 245/366 (66%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D + YV+DPGF KQN ++ + GM+SL V PIS+A ANQ
Sbjct: 810 RKVVIATNIAETSITI-DHIY---YVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRA 865
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDP 892
KCFRLYT AY+ E+ ++PEIQR NL N +L+LKA+GINDL+HFDF+DP
Sbjct: 866 GRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDP 925
Query: 893 PPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTI 952
PP T++ ALE+LYAL AL+ G LT+LGR+MA+FP++P + K+L+AS + +C +E+++I
Sbjct: 926 PPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSI 985
Query: 953 ASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFI 1012
+ML++ +FYRPK+K AD + F GDHL LLN+YN W + +S WC ENFI
Sbjct: 986 VAMLNLPN-VFYRPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQSRYSKPWCAENFI 1044
Query: 1013 QHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTA 1072
Q R++ RARDVR Q+ ++QR + +++S ++T +R+A+ +G+F + A+ + Y+T
Sbjct: 1045 QFRALTRARDVRNQIERIMQRFKYQVMSCGSDTNRVRQALCSGFFRNAARKDQQEGYRTL 1104
Query: 1073 KHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELE 1132
V +HP+S+LF + WV+YH LV TTKE+M T IE KWL++ AP ++K
Sbjct: 1105 IEGTPVYLHPSSALFGKHAEWVIYHTLVLTTKEYMHCTTSIEPKWLVDAAPTFFKV-SAS 1163
Query: 1133 DSTNKK 1138
D +K+
Sbjct: 1164 DKLSKR 1169
Score = 756 (271.2 bits), Expect = 4.1e-106, Sum P(2) = 4.1e-106
Identities = 143/241 (59%), Positives = 187/241 (77%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE + +PDL YSV+++DEAHERT+ TD+LF L+K R R DLK++++SATL
Sbjct: 638 MTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATL 697
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS +F++ P+F IPGR FPV+I Y+K PE+DY+DA + +++QIH +P GDIL+FL
Sbjct: 698 DADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFL 757
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEI+T EIL +R++ LG + ELIILPVYS LP +MQ++IF P PP +RKVV+ATN
Sbjct: 758 TGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATN 817
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDF 240
IAETS+TID+I YV+DPGF KQN ++ + GM+SL V PIS+A ANQRAG P F
Sbjct: 818 IAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCF 877
Query: 241 R 241
R
Sbjct: 878 R 878
Score = 390 (142.3 bits), Expect = 7.0e-124, Sum P(3) = 7.0e-124
Identities = 73/145 (50%), Positives = 101/145 (69%)
Query: 656 QKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK 715
++ + I++ ++SLP++ F++ LI AV+++Q++I+ GETGSGKTTQ+ QYL EAGF +
Sbjct: 529 KRTNMTIKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEG 588
Query: 716 MKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREF 775
+ IGCTQP EE+G +LG EVGY IRFEDCTS T IKYMTDG L RE
Sbjct: 589 V-IGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREI 647
Query: 776 LSEPDLASYSVMIIDEAHPKVYVID 800
+ +PDL YSV+++DEAH + D
Sbjct: 648 VIDPDLKRYSVIMLDEAHERTIATD 672
Score = 371 (135.7 bits), Expect = 4.1e-106, Sum P(2) = 4.1e-106
Identities = 71/188 (37%), Positives = 114/188 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L + +Y+P+E + + K K + GDHL LLN+YN W + +S WC EN
Sbjct: 988 MLNLPNVFYRPKEKQTQADAKKAKF-----HDPNGDHLTLLNVYNAWKQSRYSKPWCAEN 1042
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FIQ R++ RARDVR Q+ ++QR + +++S ++T +R+A+ +G+F + A+ + Y+
Sbjct: 1043 FIQFRALTRARDVRNQIERIMQRFKYQVMSCGSDTNRVRQALCSGFFRNAARKDQQEGYR 1102
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T V +HP+S+LF + WV+YH LV TTKE+M T IE KWL++ AP ++K
Sbjct: 1103 TLIEGTPVYLHPSSALFGKHAEWVIYHTLVLTTKEYMHCTTSIEPKWLVDAAPTFFKV-S 1161
Query: 1298 LEDSTNKK 1305
D +K+
Sbjct: 1162 ASDKLSKR 1169
Score = 45 (20.9 bits), Expect = 1.3e-87, Sum P(3) = 1.3e-87
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 763 IKYMTDGTLHREFLSEPDLASYSVMIIDEAHP-KVYVI 799
+K DG +H L++ S+ +D+ P KV VI
Sbjct: 256 VKGKVDGLVHVSALTDGQRVSHPSDFVDKGQPVKVKVI 293
Score = 41 (19.5 bits), Expect = 7.0e-124, Sum P(3) = 7.0e-124
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D + ++++ R ++R + + SR+DK
Sbjct: 179 DSRHRRKEQYRSRSRSRSRGKDQYGRRSRRDK 210
Score = 39 (18.8 bits), Expect = 4.3e-71, Sum P(2) = 4.3e-71
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 630 DNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEE 664
D + + L+LP + +E+ T+ KK +
Sbjct: 980 DEMLSIVAMLNLPNVFYRPKEKQTQADAKKAKFHD 1014
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 840 (300.8 bits), Expect = 4.2e-121, Sum P(2) = 4.2e-121
Identities = 163/358 (45%), Positives = 236/358 (65%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D + YV+DPGF K N ++S+ GM+SL V PISKA ANQ
Sbjct: 608 RKVILATNIAETSITI-DGIY---YVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRS 663
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDP 892
KC+RLYT AY+ E+ NT+PEIQR NL + +LMLKA+GI+DL++F+F+DP
Sbjct: 664 GRAGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDP 723
Query: 893 PPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTI 952
P T++ ALE LY L AL+ G+LT LGR+MA+ P++P + K L+ S +Y+C EEI++I
Sbjct: 724 PSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSVEYECTEEILSI 783
Query: 953 ASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFI 1012
+MLSV IFYRPKDK AD + F GDHL LLN++ W ++S WC +NFI
Sbjct: 784 VAMLSVQ-TIFYRPKDKQALADQRKSRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFI 842
Query: 1013 QHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTA 1072
Q RSM+RA +VR+QL ++QR + +S + +R+ +GYF + AK + YKT
Sbjct: 843 QERSMRRAMEVRKQLKSIMQRFGYKTMSCGNDVDRVRRTFCSGYFKNSAKRQEGEGYKTL 902
Query: 1073 KHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1130
N V +HP+SSL+ + P++V+YH L+ T+KE+M V+ I+ WL E+AP Y++P +
Sbjct: 903 NENTLVYLHPSSSLYGKKPQYVIYHTLLLTSKEYMHCVSIIDPNWLYELAPKYFRPAD 960
Score = 748 (268.4 bits), Expect = 4.9e-108, Sum P(2) = 4.9e-108
Identities = 139/229 (60%), Positives = 184/229 (80%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L++P++ YSV+++DEAHERT+ TD+LF L+K+ + +LK++++SATL
Sbjct: 436 MTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATL 495
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D+ KFS +F++ P+ IPGR FPV++ YTKAPE DY+ A + S++QIH ++P GDILVFL
Sbjct: 496 DSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFL 555
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQEEIET E L +R++ LG I ELIILPVYS LP++MQT+IF PTPP +RKV+LATN
Sbjct: 556 TGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATN 615
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETS+TID I YV+DPGF K N ++S+ GM+SL V PISKA ANQR+G
Sbjct: 616 IAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSG 664
Score = 379 (138.5 bits), Expect = 4.2e-121, Sum P(2) = 4.2e-121
Identities = 77/165 (46%), Positives = 104/165 (63%)
Query: 647 KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYL 706
K + T ++ L I+E ++ LP+Y + L++A+RD+Q ++I GETGSGKTTQI QY+
Sbjct: 314 KSNKTETFGKRTSLPIQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYI 373
Query: 707 HEAGFTK--DKMK-IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTII 763
+E G K + K IGCTQP EE+G KLG VGY IRFED TSE T+I
Sbjct: 374 YEEGMNKVGGQTKLIGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVI 433
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNN 808
KYMTDG L RE L++P++ YSV+++DEAH + D F N
Sbjct: 434 KYMTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLKN 478
Score = 355 (130.0 bits), Expect = 4.9e-108, Sum P(2) = 4.9e-108
Identities = 68/181 (37%), Positives = 111/181 (61%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELG-GDHLVLLNIYNQWADADFSTQWCYE 1176
+L V +Y+P++ + +++ KSR GDHL LLN++ W ++S WC +
Sbjct: 786 MLSVQTIFYRPKDKQALADQR------KSRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRD 839
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSY 1236
NFIQ RSM+RA +VR+QL ++QR + +S + +R+ +GYF + AK + Y
Sbjct: 840 NFIQERSMRRAMEVRKQLKSIMQRFGYKTMSCGNDVDRVRRTFCSGYFKNSAKRQEGEGY 899
Query: 1237 KTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPR 1296
KT N V +HP+SSL+ + P++V+YH L+ T+KE+M V+ I+ WL E+AP Y++P
Sbjct: 900 KTLNENTLVYLHPSSSLYGKKPQYVIYHTLLLTSKEYMHCVSIIDPNWLYELAPKYFRPA 959
Query: 1297 E 1297
+
Sbjct: 960 D 960
Score = 37 (18.1 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 911 LNHHGDLTKLGRRMAEFPLD 930
+N G LTK +R ++F D
Sbjct: 244 VNQSGPLTKSAQRGSKFARD 263
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 678 (243.7 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 141/346 (40%), Positives = 210/346 (60%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYV+D GF K +N +TG+E+LT VPISKA+A Q KCFRLYT +Y
Sbjct: 325 VYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKPGKCFRLYTEESYT-S 383
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L D +PE+QR NL +L LKALGI++++HFDFL PPP E + ALE LY+LGAL+ +
Sbjct: 384 LSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTKALELLYSLGALDDYA 443
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LTK LG RMAE +DPMM K LL++E + C+ E++TIA+M S G ++ + + + +
Sbjct: 444 KLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAGGDVWIQHEGERKQFE 503
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQ-WCYENFIQHRSMKRARDVREQLIGLVQR 1033
+ R+ F GDHL LN+Y + +C+EN + +++M RA +R QL ++R
Sbjct: 504 SRRRKFAAGEGDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTMSRAVSIRAQLKRYLER 563
Query: 1034 ----VEMELVSNPTETVN-------IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHP 1082
V+ L S T + IR+ +T GYF H A++ G+++T + T+ HP
Sbjct: 564 FGIRVDETLASGKTRGASPGVTGEQIRRCLTTGYFAHAARMQADGTFQTVQGGTTLHAHP 623
Query: 1083 NSSLFEELPRWVLYHELVFT-TKEFMRQVTEIESKWLLEVAPHYYK 1127
+S +F WV++HE++ T K F+R ++++E WLLE AP +Y+
Sbjct: 624 SSLMFNRKADWVIFHEVMETGAKTFIRDISKVEKCWLLEYAPDFYQ 669
Score = 542 (195.9 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 115/257 (44%), Positives = 165/257 (64%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE L +P L+ YS++++DEAHER++ TDIL GL+K I + R +L+++ISSATL
Sbjct: 118 LTDGLLIREALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATL 177
Query: 61 DAQKFSEFFD----------DAP------VFRIPGRRFPVDIYYTKAPEADYIDACVVSI 104
A++F FF + P + + GR +P+DI Y ++P DY+ V ++
Sbjct: 178 QAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTV 237
Query: 105 LQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKI 164
L +H +P GDILVFLTG++EIE + + +R L S+ + L+ LP++S L T+ Q I
Sbjct: 238 LDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYI 297
Query: 165 FLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASA 224
F P N RKV+ +TNIAE S+TI I+YV+D GF K +N +TG+E+LT VPISKA+A
Sbjct: 298 FEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAA 357
Query: 225 NQRAGVITGFNPLSDFR 241
QRAG P FR
Sbjct: 358 AQRAGRAGRTKPGKCFR 374
Score = 306 (112.8 bits), Expect = 3.7e-95, Sum P(2) = 3.7e-95
Identities = 62/127 (48%), Positives = 82/127 (64%)
Query: 669 LPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXX 728
LPI K L+ V + V ++ G+TGSGKTTQIPQ+L +AG+ D IG TQP
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 729 XXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMI 788
EE G ++G EVGY+IRFED TSE T IK++TDG L RE L +P L+ YS+++
Sbjct: 81 TTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYSIVM 140
Query: 789 IDEAHPK 795
+DEAH +
Sbjct: 141 VDEAHER 147
Score = 250 (93.1 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 52/156 (33%), Positives = 87/156 (55%)
Query: 1152 GDHLVLLNIYNQWADADFSTQ-WCYENFIQHRSMKRARDVREQLIGLVQR----VEMELV 1206
GDHL LN+Y + +C+EN + +++M RA +R QL ++R V+ L
Sbjct: 514 GDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETLA 573
Query: 1207 SNPTETVN-------IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPR 1259
S T + IR+ +T GYF H A++ G+++T + T+ HP+S +F
Sbjct: 574 SGKTRGASPGVTGEQIRRCLTTGYFAHAARMQADGTFQTVQGGTTLHAHPSSLMFNRKAD 633
Query: 1260 WVLYHELVFT-TKEFMRQVTEIESKWLLEVAPHYYK 1294
WV++HE++ T K F+R ++++E WLLE AP +Y+
Sbjct: 634 WVIFHEVMETGAKTFIRDISKVEKCWLLEYAPDFYQ 669
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 643 (231.4 bits), Expect = 4.8e-120, Sum P(2) = 4.8e-120
Identities = 141/343 (41%), Positives = 212/343 (61%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L V P+S+ASANQ KC+RLYT A+ +
Sbjct: 347 VYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFD-K 405
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 406 LPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 465
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + IF P ++ A
Sbjct: 466 RLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPGNQKSQAI 524
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ +
Sbjct: 525 RVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKF 584
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSY-KTAKHN-QTVMIHPNSSLFEELPR 1092
++ S+ + + + I +G+F + A+ +G+Y +T H+ + +H LF +P
Sbjct: 585 QVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSRTLAHSGREAQVH----LFTVVPG 640
Query: 1093 -----W---VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
W V+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 641 TQSRYWGFRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 683
Score = 578 (208.5 bits), Expect = 4.8e-120, Sum P(2) = 4.8e-120
Identities = 121/241 (50%), Positives = 166/241 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YS +++DEAHERTL+TDI GL+K I R R DL+LL++SATL
Sbjct: 144 LTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATL 203
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 204 DAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQT 263
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLG-SKIKE-LIILPVYSNLPTDMQTKIFLPT 168
+ GDIL FLTGQEE+ET +L ++ R LG + +K L +LP+Y+ LP+ Q K+F
Sbjct: 264 EGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERV 323
Query: 169 PPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRA 228
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L V P+S+ASANQRA
Sbjct: 324 SRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRA 383
Query: 229 G 229
G
Sbjct: 384 G 384
Score = 317 (116.6 bits), Expect = 1.7e-92, Sum P(2) = 1.7e-92
Identities = 62/142 (43%), Positives = 88/142 (61%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ V ++Q ++I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 37 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 96
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQP EE G LG EVGY IRF+DCT T IK++TDG L RE + +
Sbjct: 97 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 156
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YS +++DEAH + D
Sbjct: 157 PLLTKYSAIMLDEAHERTLYTD 178
Score = 252 (93.8 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 54/153 (35%), Positives = 93/153 (60%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 535 GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGD 594
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSY-KTAKHN-QTVMIHPNSSLFEELPR-----W---V 1261
+ + I +G+F + A+ +G+Y +T H+ + +H LF +P W V
Sbjct: 595 PDPVLRCIVSGFFANAARFHSTGAYSRTLAHSGREAQVH----LFTVVPGTQSRYWGFRV 650
Query: 1262 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 651 IYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 683
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 642 (231.1 bits), Expect = 6.2e-120, Sum P(2) = 6.2e-120
Identities = 134/333 (40%), Positives = 207/333 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L V P+S+ASANQ KC+RLYT A+ +
Sbjct: 355 VYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFD-K 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + IF P ++ A
Sbjct: 474 RLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPGNQKSQAI 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ +
Sbjct: 533 RVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWV 1094
++ S+ + + + I +G+F + A+ +G+Y ++ ++ + + + V
Sbjct: 593 QVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSVILSPHSLYLYYLTLFNRKFLQKV 652
Query: 1095 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
+Y+E++ T+K +MR VT IES WLLE+APH+Y+
Sbjct: 653 IYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 685
Score = 578 (208.5 bits), Expect = 6.2e-120, Sum P(2) = 6.2e-120
Identities = 121/241 (50%), Positives = 166/241 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YS +++DEAHERTL+TDI GL+K I R R DL+LL++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 212 DAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLG-SKIKE-LIILPVYSNLPTDMQTKIFLPT 168
+ GDIL FLTGQEE+ET +L ++ R LG + +K L +LP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERV 331
Query: 169 PPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRA 228
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L V P+S+ASANQRA
Sbjct: 332 SRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRA 391
Query: 229 G 229
G
Sbjct: 392 G 392
Score = 317 (116.6 bits), Expect = 2.2e-92, Sum P(2) = 2.2e-92
Identities = 62/142 (43%), Positives = 88/142 (61%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ V ++Q ++I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQP EE G LG EVGY IRF+DCT T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YS +++DEAH + D
Sbjct: 165 PLLTKYSAIMLDEAHERTLYTD 186
Score = 251 (93.4 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 47/143 (32%), Positives = 88/143 (61%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LN+Y + + ++QWC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 543 GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGD 602
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
+ + I +G+F + A+ +G+Y ++ ++ + + + V+Y+E++ T+K
Sbjct: 603 PDPVLRCIVSGFFANAARFHSTGAYSVILSPHSLYLYYLTLFNRKFLQKVIYNEVIQTSK 662
Query: 1272 EFMRQVTEIESKWLLEVAPHYYK 1294
+MR VT IES WLLE+APH+Y+
Sbjct: 663 YYMRDVTAIESAWLLELAPHFYQ 685
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 683 (245.5 bits), Expect = 9.1e-120, Sum P(2) = 9.1e-120
Identities = 141/346 (40%), Positives = 216/346 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYV+D GF K ++ TG+E+LT VPISKA+A Q KCFRLYT AY+ +
Sbjct: 325 VYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQHAYE-Q 383
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L D T+PEIQR NL ++ LKALGI++++ FDFL PP + ++ A E LY+LGA++ +
Sbjct: 384 LPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFELLYSLGAIDDYA 443
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LTK LG RMAE +DPMM K+LL+++ + C+ EI+TIA+M+S+ GA++ + ++
Sbjct: 444 KLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVWVQHDGDKKSSE 503
Query: 975 TARKNFFMLGGDHLVLLNIYNQWAD-ADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
++R+ F + GDHL LN+Y + ++WC +N + +RS+ RA VR QL ++R
Sbjct: 504 SSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSVRAQLKRYLER 563
Query: 1034 VEMEL------------VSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIH 1081
+++ +S P E I++ +T GYF H A++ G++KT T+ H
Sbjct: 564 FGIQVDETFPSHYNKSDLSKPAE--KIQRCLTTGYFAHAARMQPDGTFKTVSGGMTLHAH 621
Query: 1082 PNSSLFEELPRWVLYHELVFT-TKEFMRQVTEIESKWLLEVAPHYY 1126
P+S +F WV++HE++ T K F+R +T+IE +LLE AP+YY
Sbjct: 622 PSSLMFNRKADWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYY 667
Score = 534 (193.0 bits), Expect = 9.1e-120, Sum P(2) = 9.1e-120
Identities = 114/256 (44%), Positives = 167/256 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE L +P L+ YSV+++DEAHER+L TDIL G++K I++ R +L++++SSATL
Sbjct: 119 LTDGMLLREALVDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATL 178
Query: 61 DAQKFSEFF--DDA---P----------VFRIPGRRFPVDIYYTKAPEADYIDACVVSIL 105
A+ F +F D++ P + I GR +PVD + ++ +Y++ V ++
Sbjct: 179 QAEDFLRYFAGDESQQGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVF 238
Query: 106 QIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIF 165
IH + GDIL+FLTG+EEIET +++ +R L K + L+ LP+Y+ L TD Q +F
Sbjct: 239 DIHLQEGEGDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVF 298
Query: 166 LPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASAN 225
P P N RKVV++TNIAE S+TI+ I+YV+D GF K ++ TG+E+LT VPISKA+A
Sbjct: 299 EPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAV 358
Query: 226 QRAGVITGFNPLSDFR 241
QRAG P FR
Sbjct: 359 QRAGRAGRTKPGKCFR 374
Score = 297 (109.6 bits), Expect = 9.5e-95, Sum P(2) = 9.5e-95
Identities = 62/127 (48%), Positives = 81/127 (63%)
Query: 669 LPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXX 728
LPI KQ ++ V + V I+ G+TGSGKTTQ+PQYL +AG+ + I TQP
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQPRRVAA 81
Query: 729 XXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMI 788
EEM KLG +VGY+IRFED TS T IK++TDG L RE L +P L+ YSV++
Sbjct: 82 TTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYSVIM 141
Query: 789 IDEAHPK 795
+DEAH +
Sbjct: 142 VDEAHER 148
Score = 263 (97.6 bits), Expect = 5.4e-75, Sum P(2) = 5.4e-75
Identities = 58/172 (33%), Positives = 95/172 (55%)
Query: 1136 NKKMPKTLGKSRAELGGDHLVLLNIYNQWAD-ADFSTQWCYENFIQHRSMKRARDVREQL 1194
+KK ++ + A GDHL LN+Y + ++WC +N + +RS+ RA VR QL
Sbjct: 498 DKKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSVRAQL 557
Query: 1195 IGLVQRVEMEL------------VSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHN 1242
++R +++ +S P E I++ +T GYF H A++ G++KT
Sbjct: 558 KRYLERFGIQVDETFPSHYNKSDLSKPAE--KIQRCLTTGYFAHAARMQPDGTFKTVSGG 615
Query: 1243 QTVMIHPNSSLFEELPRWVLYHELVFT-TKEFMRQVTEIESKWLLEVAPHYY 1293
T+ HP+S +F WV++HE++ T K F+R +T+IE +LLE AP+YY
Sbjct: 616 MTLHAHPSSLMFNRKADWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYY 667
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 680 (244.4 bits), Expect = 1.7e-118, Sum P(2) = 1.7e-118
Identities = 133/340 (39%), Positives = 218/340 (64%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVID G+ K +N + G++SL + PISKA+A+Q +RLYT +K ++
Sbjct: 652 YVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDM 711
Query: 857 EDNTVPEIQRINLGNAVLMLKALGIND-LIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
T+PEIQR NL N +L+LK+L + D L F F+D PP +T + +L +L+ +GA++ G
Sbjct: 712 YLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSG 771
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT LG +MA+FPL P + K+LL + + C +E++TI SMLSV +FYRPK++ AD
Sbjct: 772 QLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVP-QVFYRPKERQKEADI 830
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
AR FF+ DHL LLN++ QW +FS+ WC ++F+Q++S+ RARD+R+QL+ +++ +
Sbjct: 831 ARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQK 890
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL--FEELPRW 1093
+ ++S+ + I+K I +G+ + AK++ +Y K +V +HP S+L +LP +
Sbjct: 891 IPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPY 950
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELED 1133
V+YHEL+ T+KE++ VT ++ WL+E Y + +++
Sbjct: 951 VVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIKRIKN 990
Score = 566 (204.3 bits), Expect = 1.7e-118, Sum P(2) = 1.7e-118
Identities = 121/240 (50%), Positives = 162/240 (67%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE L + L YS +IIDEAHER+L+TDIL G K ++ R DLKL+I+SAT+
Sbjct: 449 VTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATM 508
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL--GDILV 118
+A+KFS FF +AP F IPGR FPV YT P DY++A V ++IH GDIL+
Sbjct: 509 NAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILI 568
Query: 119 FLTGQEEIETCNEILQDRVRRLGSK---------IKELIILPVYSNLPTDMQTKIFLPTP 169
F+TGQE+IET + LQ++ ++ SK I ++ ILP+YS LP D+Q KIF
Sbjct: 569 FMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLH 628
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK+++ATNIAETSLTI I YVID G+ K +N + G++SL + PISKA+A+QR+G
Sbjct: 629 GTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSG 688
Score = 310 (114.2 bits), Expect = 1.8e-91, Sum P(2) = 1.8e-91
Identities = 72/168 (42%), Positives = 101/168 (60%)
Query: 637 QALSLPGN---RDKGEEEMTEKQK----KKLNIEETKKSLPIYPFKQDLIDAVRDHQVLI 689
+ L L N +DK +++ + K +I+ TK+ LP++ + L+ +R++QV++
Sbjct: 311 EVLGLENNNKAKDKSNQKICDDTALFTPSKDDIKHTKEQLPVFRCRSQLLSLIRENQVVV 370
Query: 690 IEGETGSGKTTQIPQYLHEAGFTKDKMK-IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVG 748
I GETGSGKTTQ+ QYL+E G+ D+ K I TQP EM V LG EVG
Sbjct: 371 IIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVAAISVAKRVAMEMQVPLGKEVG 430
Query: 749 YAIRFEDCT-SERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y+IRFED T SE T +K++TDG L RE L + L YS +IIDEAH +
Sbjct: 431 YSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHER 478
Score = 296 (109.3 bits), Expect = 5.5e-77, Sum P(2) = 5.5e-77
Identities = 60/186 (32%), Positives = 113/186 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKT-LGKSRAELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V +Y+P+E + + K + KS DHL LLN++ QW +FS+ WC +
Sbjct: 811 MLSVPQVFYRPKERQKEADIARNKFFIAKS------DHLTLLNVFEQWRANNFSSHWCNK 864
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSY 1236
+F+Q++S+ RARD+R+QL+ +++ ++ ++S+ + I+K I +G+ + AK++ +Y
Sbjct: 865 HFVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNY 924
Query: 1237 KTAKHNQTVMIHPNSSL--FEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
K +V +HP S+L +LP +V+YHEL+ T+KE++ VT ++ WL+E Y
Sbjct: 925 VHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYD 984
Query: 1295 PRELED 1300
+ +++
Sbjct: 985 IKRIKN 990
Score = 42 (19.8 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 626 ELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKK 667
+L +N I F + L L N K EE+ T +K +I + KK
Sbjct: 53 KLSSNNPIIFNELLELLKN--KSEEDSTGPKKIAPSINKRKK 92
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 724 (259.9 bits), Expect = 2.6e-118, Sum P(3) = 2.6e-118
Identities = 137/332 (41%), Positives = 214/332 (64%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVID G+CK +N GM+ L V PIS+A+ANQ C+RLYT + +L
Sbjct: 816 YVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDL 875
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
N +PEIQR NL N VL+LK+L + +L FDF+D P E+++ +L +L+ LGA+N+ G+
Sbjct: 876 YQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGN 935
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +GR+M +FPLDP + K+++ S+ ++C +EI+ I SMLS + +IF K+ ++
Sbjct: 936 LTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESK 994
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
++ F + DHL LLNIY QW ++S WC +NFIQ++++ +A++V QLI +++ + +
Sbjct: 995 KEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNI 1054
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE--ELPRWV 1094
+ VS + IRK I +GYF++ AKL Y + N + +HPNSSL+ P +V
Sbjct: 1055 KNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYV 1114
Query: 1095 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
+Y E+VFTTKE+MR VT ++ +WL E+ P ++
Sbjct: 1115 IYQEIVFTTKEYMRNVTTVDPEWLCELGPLFF 1146
Score = 347 (127.2 bits), Expect = 2.6e-118, Sum P(3) = 2.6e-118
Identities = 70/151 (46%), Positives = 102/151 (67%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE L++ +L YSV+I+DEAHER+++TD+L G++K+I R+DLKL+++SAT+
Sbjct: 575 VTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATI 634
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQP-----LGD 115
DA+KFS FF +AP++ I GR F V I Y + P DYI+ V +QIH + GD
Sbjct: 635 DAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGD 694
Query: 116 ILVFLTGQEEIETCNEILQDRVRRLGSKIKE 146
IL+F+TGQE+I +L +R + KE
Sbjct: 695 ILIFMTGQEDINATCYLLSERFYEVYESYKE 725
Score = 333 (122.3 bits), Expect = 6.0e-74, Sum P(3) = 6.0e-74
Identities = 74/207 (35%), Positives = 121/207 (58%)
Query: 1090 LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK-TLGKSRA 1148
L + V+Y + TKE + V+ + S + + + +E +S K K T+ +S
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSI------FLESKENNESIESKKEKFTVPES-- 1003
Query: 1149 ELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSN 1208
DHL LLNIY QW ++S WC +NFIQ++++ +A++V QLI +++ + ++ VS
Sbjct: 1004 ----DHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSC 1059
Query: 1209 PTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE--ELPRWVLYHEL 1266
+ IRK I +GYF++ AKL Y + N + +HPNSSL+ P +V+Y E+
Sbjct: 1060 DNKWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEI 1119
Query: 1267 VFTTKEFMRQVTEIESKWLLEVAPHYY 1293
VFTTKE+MR VT ++ +WL E+ P ++
Sbjct: 1120 VFTTKEYMRNVTTVDPEWLCELGPLFF 1146
Score = 327 (120.2 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 73/152 (48%), Positives = 101/152 (66%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIP 703
N+DK + T K K++L + K+SLPIY K +L+DAV ++ ++II GETGSGKTTQI
Sbjct: 459 NKDK---KNTLKDKEELL--KLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIV 513
Query: 704 QYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTII 763
QYL+E G+ ++ + I CTQP EM V +G VGY IRFED T++ T I
Sbjct: 514 QYLYEEGYHRNGI-ICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKI 572
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
+Y+TDG L RE L++ +L YSV+I+DEAH +
Sbjct: 573 RYVTDGILLRETLNDKELDKYSVIIMDEAHER 604
Score = 216 (81.1 bits), Expect = 2.6e-118, Sum P(3) = 2.6e-118
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 149 ILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSR 208
I P+YS L ++ Q+KIF + RK++++TNIAETSLT+D I YVID G+CK +N
Sbjct: 774 IFPIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 209 TGMESLTVVPISKASANQRAG 229
GM+ L V PIS+A+ANQR+G
Sbjct: 832 IGMDVLQVTPISQANANQRSG 852
Score = 55 (24.4 bits), Expect = 4.8e-69, Sum P(3) = 4.8e-69
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 605 EQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEE 664
E +++ + + + E E Y+ +N+ D I + N D KKK++ +
Sbjct: 703 EDINATCYLLSERFYEVYESYKESKNNKKDTINKIKNILNEDNNNNNNDSNIKKKVDGDN 762
Query: 665 TKKSLPIYPF 674
IYPF
Sbjct: 763 NTNDHMIYPF 772
Score = 42 (19.8 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 1007 CY---ENFIQ-HRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAI 1052
CY E F + + S K +++ ++ I ++ + E +N NI+K +
Sbjct: 709 CYLLSERFYEVYESYKESKNNKKDTINKIKNILNEDNNNNNNDSNIKKKV 758
Score = 42 (19.8 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 1174 CY---ENFIQ-HRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAI 1219
CY E F + + S K +++ ++ I ++ + E +N NI+K +
Sbjct: 709 CYLLSERFYEVYESYKESKNNKKDTINKIKNILNEDNNNNNNDSNIKKKV 758
Score = 39 (18.8 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKNVATSRQ 478
+ SD ++K D+ +K N K + R+
Sbjct: 11 SSSDGNKKNNDKIQTGFLYNEKKNEKTLEFKRR 43
Score = 39 (18.8 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 9/46 (19%), Positives = 19/46 (41%)
Query: 299 KNHYIQDQTLVTFMLTHLPTTYIKRKSSEYKVGNGEDSFCVSPLYN 344
K Y +D+ ++ ++ +K + Y D+ + LYN
Sbjct: 88 KEKYYKDRDKNKIKKNNIKDKHVNQKYNIYNSSTSPDNSDIDNLYN 133
Score = 38 (18.4 bits), Expect = 1.4e-99, Sum P(3) = 1.4e-99
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKN 472
+S +++K+ + + N D NN N
Sbjct: 725 ESKNNKKDTINKIKNILNEDNNNNNN 750
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 724 (259.9 bits), Expect = 2.6e-118, Sum P(3) = 2.6e-118
Identities = 137/332 (41%), Positives = 214/332 (64%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVID G+CK +N GM+ L V PIS+A+ANQ C+RLYT + +L
Sbjct: 816 YVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDL 875
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
N +PEIQR NL N VL+LK+L + +L FDF+D P E+++ +L +L+ LGA+N+ G+
Sbjct: 876 YQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGN 935
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +GR+M +FPLDP + K+++ S+ ++C +EI+ I SMLS + +IF K+ ++
Sbjct: 936 LTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESK 994
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
++ F + DHL LLNIY QW ++S WC +NFIQ++++ +A++V QLI +++ + +
Sbjct: 995 KEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNI 1054
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE--ELPRWV 1094
+ VS + IRK I +GYF++ AKL Y + N + +HPNSSL+ P +V
Sbjct: 1055 KNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYV 1114
Query: 1095 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
+Y E+VFTTKE+MR VT ++ +WL E+ P ++
Sbjct: 1115 IYQEIVFTTKEYMRNVTTVDPEWLCELGPLFF 1146
Score = 347 (127.2 bits), Expect = 2.6e-118, Sum P(3) = 2.6e-118
Identities = 70/151 (46%), Positives = 102/151 (67%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE L++ +L YSV+I+DEAHER+++TD+L G++K+I R+DLKL+++SAT+
Sbjct: 575 VTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATI 634
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQP-----LGD 115
DA+KFS FF +AP++ I GR F V I Y + P DYI+ V +QIH + GD
Sbjct: 635 DAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGD 694
Query: 116 ILVFLTGQEEIETCNEILQDRVRRLGSKIKE 146
IL+F+TGQE+I +L +R + KE
Sbjct: 695 ILIFMTGQEDINATCYLLSERFYEVYESYKE 725
Score = 333 (122.3 bits), Expect = 6.0e-74, Sum P(3) = 6.0e-74
Identities = 74/207 (35%), Positives = 121/207 (58%)
Query: 1090 LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK-TLGKSRA 1148
L + V+Y + TKE + V+ + S + + + +E +S K K T+ +S
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSI------FLESKENNESIESKKEKFTVPES-- 1003
Query: 1149 ELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSN 1208
DHL LLNIY QW ++S WC +NFIQ++++ +A++V QLI +++ + ++ VS
Sbjct: 1004 ----DHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSC 1059
Query: 1209 PTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFE--ELPRWVLYHEL 1266
+ IRK I +GYF++ AKL Y + N + +HPNSSL+ P +V+Y E+
Sbjct: 1060 DNKWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEI 1119
Query: 1267 VFTTKEFMRQVTEIESKWLLEVAPHYY 1293
VFTTKE+MR VT ++ +WL E+ P ++
Sbjct: 1120 VFTTKEYMRNVTTVDPEWLCELGPLFF 1146
Score = 327 (120.2 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 73/152 (48%), Positives = 101/152 (66%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIP 703
N+DK + T K K++L + K+SLPIY K +L+DAV ++ ++II GETGSGKTTQI
Sbjct: 459 NKDK---KNTLKDKEELL--KLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIV 513
Query: 704 QYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTII 763
QYL+E G+ ++ + I CTQP EM V +G VGY IRFED T++ T I
Sbjct: 514 QYLYEEGYHRNGI-ICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKI 572
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
+Y+TDG L RE L++ +L YSV+I+DEAH +
Sbjct: 573 RYVTDGILLRETLNDKELDKYSVIIMDEAHER 604
Score = 216 (81.1 bits), Expect = 2.6e-118, Sum P(3) = 2.6e-118
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 149 ILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSR 208
I P+YS L ++ Q+KIF + RK++++TNIAETSLT+D I YVID G+CK +N
Sbjct: 774 IFPIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 209 TGMESLTVVPISKASANQRAG 229
GM+ L V PIS+A+ANQR+G
Sbjct: 832 IGMDVLQVTPISQANANQRSG 852
Score = 55 (24.4 bits), Expect = 4.8e-69, Sum P(3) = 4.8e-69
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 605 EQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEE 664
E +++ + + + E E Y+ +N+ D I + N D KKK++ +
Sbjct: 703 EDINATCYLLSERFYEVYESYKESKNNKKDTINKIKNILNEDNNNNNNDSNIKKKVDGDN 762
Query: 665 TKKSLPIYPF 674
IYPF
Sbjct: 763 NTNDHMIYPF 772
Score = 42 (19.8 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 1007 CY---ENFIQ-HRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAI 1052
CY E F + + S K +++ ++ I ++ + E +N NI+K +
Sbjct: 709 CYLLSERFYEVYESYKESKNNKKDTINKIKNILNEDNNNNNNDSNIKKKV 758
Score = 42 (19.8 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 1174 CY---ENFIQ-HRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAI 1219
CY E F + + S K +++ ++ I ++ + E +N NI+K +
Sbjct: 709 CYLLSERFYEVYESYKESKNNKKDTINKIKNILNEDNNNNNNDSNIKKKV 758
Score = 39 (18.8 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKNVATSRQ 478
+ SD ++K D+ +K N K + R+
Sbjct: 11 SSSDGNKKNNDKIQTGFLYNEKKNEKTLEFKRR 43
Score = 39 (18.8 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 9/46 (19%), Positives = 19/46 (41%)
Query: 299 KNHYIQDQTLVTFMLTHLPTTYIKRKSSEYKVGNGEDSFCVSPLYN 344
K Y +D+ ++ ++ +K + Y D+ + LYN
Sbjct: 88 KEKYYKDRDKNKIKKNNIKDKHVNQKYNIYNSSTSPDNSDIDNLYN 133
Score = 38 (18.4 bits), Expect = 1.4e-99, Sum P(3) = 1.4e-99
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKN 472
+S +++K+ + + N D NN N
Sbjct: 725 ESKNNKKDTINKIKNILNEDNNNNNN 750
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 835 (299.0 bits), Expect = 4.3e-117, Sum P(3) = 4.3e-117
Identities = 173/363 (47%), Positives = 231/363 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 377 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 432
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 433 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 492
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 493 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 552
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 553 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 611
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 612 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 671
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 672 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 730
Query: 1124 HYY 1126
YY
Sbjct: 731 QYY 733
Score = 629 (226.5 bits), Expect = 9.1e-95, Sum P(2) = 9.1e-95
Identities = 130/249 (52%), Positives = 174/249 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR R+DLK+++ SATL
Sbjct: 203 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATL 262
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 263 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 322
Query: 120 LTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
LTGQEEI E C I ++ + LG ++ ++ I+P+YS LP Q +IF P PP
Sbjct: 323 LTGQEEIDEACKRIKRE-IDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 381
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 382 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 441
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 442 RTRPGKCFR 450
Score = 353 (129.3 bits), Expect = 9.1e-95, Sum P(2) = 9.1e-95
Identities = 71/181 (39%), Positives = 109/181 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V + +P E + + ++ K R A + GDHL LLN+Y+ + S QWCY+
Sbjct: 560 MLSVPQCFVRPTEAKKAADE------AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD 613
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLSK 1232
NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L +
Sbjct: 614 NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER 673
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP Y
Sbjct: 674 TGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 732
Query: 1293 Y 1293
Y
Sbjct: 733 Y 733
Score = 309 (113.8 bits), Expect = 4.3e-117, Sum P(3) = 4.3e-117
Identities = 62/142 (43%), Positives = 86/142 (60%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYL--HEAGFTKDKMKI 718
+I + + LP++ +K+ D + HQ ++ GETGSGKTTQIPQ+ + K +
Sbjct: 96 DILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGV 155
Query: 719 GCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQP +EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 156 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 215
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 216 PLLERYGVIILDEAHERTLATD 237
Score = 56 (24.8 bits), Expect = 4.3e-117, Sum P(3) = 4.3e-117
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 447 DSD-DDRKERDEFSERLKNRDKNNTK 471
D D DDRK+RD +R ++RD+ K
Sbjct: 28 DRDRDDRKDRDRDRDRDRDRDREREK 53
Score = 41 (19.5 bits), Expect = 1.6e-115, Sum P(3) = 1.6e-115
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 445 LTDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
L D K+R + +R ++RD+++ K+ R R
Sbjct: 9 LGDDYSSSKKRSDGKDRDRDRDRDDRKDRDRDRDRDR 45
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 835 (299.0 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 173/363 (47%), Positives = 231/363 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 633 (227.9 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 132/249 (53%), Positives = 174/249 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
LTGQEEI E C I ++ V LG ++ ++ I+P+YS LP Q +IF P PP
Sbjct: 356 LTGQEEIDEACKRIKRE-VDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 475 RTRPGKCFR 483
Score = 353 (129.3 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 71/181 (39%), Positives = 109/181 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V + +P E + + ++ K R A + GDHL LLN+Y+ + S QWCY+
Sbjct: 593 MLSVPQCFVRPTEAKKAADE------AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD 646
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLSK 1232
NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L +
Sbjct: 647 NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER 706
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP Y
Sbjct: 707 TGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765
Query: 1293 Y 1293
Y
Sbjct: 766 Y 766
Score = 309 (113.8 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 63/142 (44%), Positives = 85/142 (59%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQP +EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 46 (21.3 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D D DR D +R + RD+ + + ++K
Sbjct: 26 DRDRDRDREDRSKDRDRERDRGDREREREKEKEK 59
Score = 41 (19.5 bits), Expect = 1.6e-115, Sum P(3) = 1.6e-115
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATS 476
D DR +ERD +R + R+K K + S
Sbjct: 35 DRSKDRDRERDR-GDREREREKEKEKELRAS 64
Score = 38 (18.4 bits), Expect = 3.4e-115, Sum P(3) = 3.4e-115
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 645 RDKGEEEMT-EKQKKK 659
RD+G+ E EK+K+K
Sbjct: 44 RDRGDREREREKEKEK 59
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 835 (299.0 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 173/363 (47%), Positives = 231/363 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 633 (227.9 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 132/249 (53%), Positives = 174/249 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
LTGQEEI E C I ++ V LG ++ ++ I+P+YS LP Q +IF P PP
Sbjct: 356 LTGQEEIDEACKRIKRE-VDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 475 RTRPGKCFR 483
Score = 353 (129.3 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 71/181 (39%), Positives = 109/181 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V + +P E + + ++ K R A + GDHL LLN+Y+ + S QWCY+
Sbjct: 593 MLSVPQCFVRPTEAKKAADE------AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD 646
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLSK 1232
NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L +
Sbjct: 647 NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER 706
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP Y
Sbjct: 707 TGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765
Query: 1293 Y 1293
Y
Sbjct: 766 Y 766
Score = 309 (113.8 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 63/142 (44%), Positives = 85/142 (59%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQP +EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 46 (21.3 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D D DR D +R + RD+ + + ++K
Sbjct: 26 DRDRDRDREDRSKDRDRERDRGDREREREKEKEK 59
Score = 41 (19.5 bits), Expect = 1.6e-115, Sum P(3) = 1.6e-115
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATS 476
D DR +ERD +R + R+K K + S
Sbjct: 35 DRSKDRDRERDR-GDREREREKEKEKELRAS 64
Score = 38 (18.4 bits), Expect = 3.4e-115, Sum P(3) = 3.4e-115
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 645 RDKGEEEMT-EKQKKK 659
RD+G+ E EK+K+K
Sbjct: 44 RDRGDREREREKEKEK 59
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 835 (299.0 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 173/363 (47%), Positives = 231/363 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 633 (227.9 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 132/249 (53%), Positives = 174/249 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
LTGQEEI E C I ++ V LG ++ ++ I+P+YS LP Q +IF P PP
Sbjct: 356 LTGQEEIDEACKRIKRE-VDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 475 RTRPGKCFR 483
Score = 353 (129.3 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 71/181 (39%), Positives = 109/181 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V + +P E + + ++ K R A + GDHL LLN+Y+ + S QWCY+
Sbjct: 593 MLSVPQCFVRPTEAKKAADE------AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD 646
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLSK 1232
NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L +
Sbjct: 647 NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER 706
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP Y
Sbjct: 707 TGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765
Query: 1293 Y 1293
Y
Sbjct: 766 Y 766
Score = 309 (113.8 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 63/142 (44%), Positives = 85/142 (59%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQP +EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 46 (21.3 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D D DR D +R + RD+ + + ++K
Sbjct: 26 DRDRDRDREDRSKDRDRERDRGDREREREKEKEK 59
Score = 41 (19.5 bits), Expect = 1.6e-115, Sum P(3) = 1.6e-115
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATS 476
D DR +ERD +R + R+K K + S
Sbjct: 35 DRSKDRDRERDR-GDREREREKEKEKELRAS 64
Score = 38 (18.4 bits), Expect = 3.4e-115, Sum P(3) = 3.4e-115
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 645 RDKGEEEMT-EKQKKK 659
RD+G+ E EK+K+K
Sbjct: 44 RDRGDREREREKEKEK 59
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 835 (299.0 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 173/363 (47%), Positives = 231/363 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 633 (227.9 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 132/249 (53%), Positives = 174/249 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
LTGQEEI E C I ++ V LG ++ ++ I+P+YS LP Q +IF P PP
Sbjct: 356 LTGQEEIDEACKRIKRE-VDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 475 RTRPGKCFR 483
Score = 353 (129.3 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 71/181 (39%), Positives = 109/181 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V + +P E + + ++ K R A + GDHL LLN+Y+ + S QWCY+
Sbjct: 593 MLSVPQCFVRPTEAKKAADE------AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD 646
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLSK 1232
NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L +
Sbjct: 647 NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER 706
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP Y
Sbjct: 707 TGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765
Query: 1293 Y 1293
Y
Sbjct: 766 Y 766
Score = 309 (113.8 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 63/142 (44%), Positives = 85/142 (59%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQP +EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 46 (21.3 bits), Expect = 4.8e-116, Sum P(3) = 4.8e-116
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D D DR D +R + RD+ + + ++K
Sbjct: 26 DRDRDRDREDRSKDRDRERDRGDREREREKEKEK 59
Score = 41 (19.5 bits), Expect = 1.6e-115, Sum P(3) = 1.6e-115
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATS 476
D DR +ERD +R + R+K K + S
Sbjct: 35 DRSKDRDRERDR-GDREREREKEKEKELRAS 64
Score = 38 (18.4 bits), Expect = 3.4e-115, Sum P(3) = 3.4e-115
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 645 RDKGEEEMT-EKQKKK 659
RD+G+ E EK+K+K
Sbjct: 44 RDRGDREREREKEKEK 59
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 835 (299.0 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 173/363 (47%), Positives = 231/363 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 633 (227.9 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 132/249 (53%), Positives = 174/249 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
LTGQEEI E C I ++ V LG ++ ++ I+P+YS LP Q +IF P PP
Sbjct: 356 LTGQEEIDEACKRIKRE-VDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 475 RTRPGKCFR 483
Score = 353 (129.3 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 71/181 (39%), Positives = 109/181 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V + +P E + + ++ K R A + GDHL LLN+Y+ + S QWCY+
Sbjct: 593 MLSVPQCFVRPTEAKKAADE------AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD 646
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLSK 1232
NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L +
Sbjct: 647 NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER 706
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP Y
Sbjct: 707 TGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765
Query: 1293 Y 1293
Y
Sbjct: 766 Y 766
Score = 309 (113.8 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 63/142 (44%), Positives = 85/142 (59%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQP +EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 42 (19.8 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D + DR D +R + RD+ + + ++K
Sbjct: 26 DRERDRDREDRSKDRDRERDRGDREREREKEKEK 59
Score = 41 (19.5 bits), Expect = 1.6e-115, Sum P(3) = 1.6e-115
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATS 476
D DR +ERD +R + R+K K + S
Sbjct: 35 DRSKDRDRERDR-GDREREREKEKEKELRAS 64
Score = 38 (18.4 bits), Expect = 3.4e-115, Sum P(3) = 3.4e-115
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 645 RDKGEEEMT-EKQKKK 659
RD+G+ E EK+K+K
Sbjct: 44 RDRGDREREREKEKEK 59
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 835 (299.0 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 173/363 (47%), Positives = 231/363 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 410 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 525
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS Y C
Sbjct: 526 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSN 585
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + S QWC
Sbjct: 586 EVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 644
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L
Sbjct: 645 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHL 704
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 705 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 763
Query: 1124 HYY 1126
YY
Sbjct: 764 QYY 766
Score = 633 (227.9 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 132/249 (53%), Positives = 174/249 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 120 LTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
LTGQEEI E C I ++ V LG ++ ++ I+P+YS LP Q +IF P PP
Sbjct: 356 LTGQEEIDEACKRIKRE-VDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 475 RTRPGKCFR 483
Score = 353 (129.3 bits), Expect = 3.3e-95, Sum P(2) = 3.3e-95
Identities = 71/181 (39%), Positives = 109/181 (60%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V + +P E + + ++ K R A + GDHL LLN+Y+ + S QWCY+
Sbjct: 593 MLSVPQCFVRPTEAKKAADE------AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD 646
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLSK 1232
NFI +RS+ A +VR+QL ++ R + S + +NIRKA+ GYF +A L +
Sbjct: 647 NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER 706
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP Y
Sbjct: 707 TGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765
Query: 1293 Y 1293
Y
Sbjct: 766 Y 766
Score = 309 (113.8 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 63/142 (44%), Positives = 85/142 (59%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE--AGFTKDKMKI 718
+I + + LP++ +K D + HQ ++ GETGSGKTTQIPQ+ E K +
Sbjct: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188
Query: 719 GCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSE 778
CTQP +EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L Y V+I+DEAH + D
Sbjct: 249 PLLERYGVIILDEAHERTLATD 270
Score = 42 (19.8 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D + DR D +R + RD+ + + ++K
Sbjct: 26 DRERDRDREDRSKDRDRERDRGDREREREKEKEK 59
Score = 41 (19.5 bits), Expect = 1.6e-115, Sum P(3) = 1.6e-115
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVATS 476
D DR +ERD +R + R+K K + S
Sbjct: 35 DRSKDRDRERDR-GDREREREKEKEKELRAS 64
Score = 38 (18.4 bits), Expect = 3.4e-115, Sum P(3) = 3.4e-115
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 645 RDKGEEEMT-EKQKKK 659
RD+G+ E EK+K+K
Sbjct: 44 RDRGDREREREKEKEK 59
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 613 (220.8 bits), Expect = 3.4e-115, Sum P(2) = 3.4e-115
Identities = 132/346 (38%), Positives = 197/346 (56%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K +N G+E L V +SKA A Q C+RLYT ++ +
Sbjct: 318 YVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEFE-KF 376
Query: 857 EDNTVPEIQ---RINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNH 913
+ TVPEIQ R NL + +L L AL I +++ FDF+ P + + A+EQL LGA+
Sbjct: 377 DKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQ 436
Query: 914 HGD---LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKI 970
D LT LGR+MA FPL+P K +L S K+ C EEI+TI S+LSV+ ++ Y P +
Sbjct: 437 KEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVD-SVLYNPPARR 495
Query: 971 IHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+ RK F GDHL LLN+Y + + + +WC ENF+ R+M DVR QL +
Sbjct: 496 DEVQSVRKKFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRAQLRDI 555
Query: 1031 VQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEEL 1090
++ M + S+ ++T NIR+ + F + A+L G+Y T +Q V IHP+S LF
Sbjct: 556 CVKLSMPMESSRSDTANIRRCLAHSLFMNAAELQPDGTYSTVNSHQLVAIHPSSVLFHCK 615
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1136
P V+Y+ L+ T K +MR + ++++WL + AP Y++ R+L + N
Sbjct: 616 PSCVVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFR-RKLRAAKN 660
Score = 563 (203.2 bits), Expect = 3.4e-115, Sum P(2) = 3.4e-115
Identities = 109/235 (46%), Positives = 156/235 (66%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL-----KLLI 55
+TDG L RE + +P L YSV+I+DEAHERT+HTD+LFG+VK + R +L K+++
Sbjct: 120 LTDGMLLREAIGDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIV 179
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
SAT+D +FS++F+ APV + GR+ P+ ++YTK P++DY+ A +VS+ QIH P
Sbjct: 180 MSATMDVDQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQ 239
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DILVFLTGQEEIE + +D + L ++ ++P+Y++LP Q ++F P RK
Sbjct: 240 DILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRK 299
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V+L+TNIAETS+TI I YV+D G K +N G+E L V +SKA A QR G
Sbjct: 300 VILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTG 354
Score = 298 (110.0 bits), Expect = 8.2e-82, Sum P(2) = 8.2e-82
Identities = 74/246 (30%), Positives = 122/246 (49%)
Query: 1060 IAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEF--MRQVTEIESKW 1117
I +L G+ + K +Q V+ P P + + + + +F ++ I S
Sbjct: 425 IEQLDLLGAVEQ-KEDQLVLT-PLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVS-- 480
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
LL V Y P D K + GDHL LLN+Y + + + +WC EN
Sbjct: 481 LLSVDSVLYNPPARRDEVQSVRKKFISSE-----GDHLTLLNVYRAFKNVSGNKEWCKEN 535
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ R+M DVR QL + ++ M + S+ ++T NIR+ + F + A+L G+Y
Sbjct: 536 FVNGRNMMLVSDVRAQLRDICVKLSMPMESSRSDTANIRRCLAHSLFMNAAELQPDGTYS 595
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T +Q V IHP+S LF P V+Y+ L+ T K +MR + ++++WL + AP Y++ R+
Sbjct: 596 TVNSHQLVAIHPSSVLFHCKPSCVVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFR-RK 654
Query: 1298 LEDSTN 1303
L + N
Sbjct: 655 LRAAKN 660
Score = 283 (104.7 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 58/135 (42%), Positives = 82/135 (60%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXX 725
++ LPI+ + L+ +R + ++ GETGSGKTTQIPQYL+EAG + + I TQP
Sbjct: 21 RRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGI-IAVTQPRR 79
Query: 726 XXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYS 785
+E +LG VGY +RF+D TS+ T IK++TDG L RE + +P L YS
Sbjct: 80 VAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYS 139
Query: 786 VMIIDEAHPKVYVID 800
V+I+DEAH + D
Sbjct: 140 VVILDEAHERTIHTD 154
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 835 (299.0 bits), Expect = 4.1e-115, Sum P(2) = 4.1e-115
Identities = 173/383 (45%), Positives = 241/383 (62%)
Query: 769 GTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASA 828
G R+ + ++A S + ID VYVIDPGF KQ +N R +ESL V PISKASA
Sbjct: 342 GPAGRKIVVSTNIAETS-LTIDGI---VYVIDPGFAKQKVYNPRIRVESLLVSPISKASA 397
Query: 829 NQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFD 888
+Q KCFRLYT ++ ++L+ T PEI R NL N VL LK LGI+DL+HFD
Sbjct: 398 HQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 457
Query: 889 FLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEE 948
F+DPP ETL+ ALE L LGAL+ G+LTK G M+EFPLDP M KML+ S ++ C E
Sbjct: 458 FMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNE 517
Query: 949 IVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCY 1008
I+++++MLSV F RP++ AD A+ F + GDHL LLN+Y+ + + WC+
Sbjct: 518 ILSVSAMLSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCF 576
Query: 1009 ENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLS 1064
ENF+ +R+MK A +VR+QL+ ++ R +++ S + VNIRKA+ AGYF +A L
Sbjct: 577 ENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLE 636
Query: 1065 KSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPH 1124
++G Y T K NQ V +HP++ L + P WV+Y+E V TT+ F+R VT+I +WL++VA H
Sbjct: 637 RTGHYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQH 695
Query: 1125 YYKPRELEDSTNKKMPKTLGKSR 1147
YY + K+ + L K R
Sbjct: 696 YYDLSNFPNCEAKRALEKLYKKR 718
Score = 664 (238.8 bits), Expect = 3.2e-101, Sum P(2) = 3.2e-101
Identities = 134/249 (53%), Positives = 181/249 (72%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +++P L Y V+I+DEAHERTL TD+LFGL+K+++R R DLKL++ SATL
Sbjct: 167 LTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATL 226
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A+KF E+F AP+ ++PGR PV+I+YT+ PE DY++A + +++QIH +P GDILVFL
Sbjct: 227 EAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFL 286
Query: 121 TGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP-------PNA 172
TG+EEIE C +I ++ V LG ++ + ++P+YS LP MQ KIF P P P
Sbjct: 287 TGEEEIEDACRKINKE-VSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAG 345
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RK+V++TNIAETSLTID I+YVIDPGF KQ +N R +ESL V PISKASA+QR+G
Sbjct: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 405
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 406 RTRPGKCFR 414
Score = 378 (138.1 bits), Expect = 3.2e-101, Sum P(2) = 3.2e-101
Identities = 80/234 (34%), Positives = 131/234 (55%)
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1145
+ E P +++ + EF + +L V + +PRE + + ++ K
Sbjct: 492 IMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADE------AK 545
Query: 1146 SR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
+R + GDHL LLN+Y+ + + WC+ENF+ +R+MK A +VR+QL+ ++ R ++
Sbjct: 546 ARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLK 605
Query: 1205 LVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1260
+ S + VNIRKA+ AGYF +A L ++G Y T K NQ V +HP++ L + P W
Sbjct: 606 MCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKPEW 664
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1314
V+Y+E V TT+ F+R VT+I +WL++VA HYY + K+ + L K R
Sbjct: 665 VIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYKKR 718
Score = 328 (120.5 bits), Expect = 4.1e-115, Sum P(2) = 4.1e-115
Identities = 66/149 (44%), Positives = 94/149 (63%)
Query: 657 KKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEA--GFTKD 714
++ I E ++ LP++ K D ++ + +Q LI+ GETGSGKTTQIPQ++ +A D
Sbjct: 53 QRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSD 112
Query: 715 KMK---IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
K + +GCTQP +EM V +G EVGY+IRFEDCTS RT++KY+TDG L
Sbjct: 113 KGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGML 172
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVID 800
RE +++P L Y V+I+DEAH + D
Sbjct: 173 LREAMADPLLERYKVIILDEAHERTLATD 201
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 822 (294.4 bits), Expect = 7.3e-115, Sum P(3) = 7.3e-115
Identities = 169/364 (46%), Positives = 232/364 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V ISKAS
Sbjct: 384 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 439
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AYK E++DNT PEI R NLG+ VL LK LGI+DL+HF
Sbjct: 440 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 499
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L ALN GDLT+LG MAEFPLDP + KM++AS + C
Sbjct: 500 DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSN 559
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
E+++I +MLSV F RP + AD ++ F + GDHL LLN+Y+ + S QWC
Sbjct: 560 EVLSITAMLSVPQC-FVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWC 618
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +RS+ A +VR+QL ++ R + S + +NIR+A+ G+F +A L
Sbjct: 619 YDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALVTGFFMQVAHL 678
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP S++ + P WVLY+E V TTK ++R T+I+ +WL+++AP
Sbjct: 679 ERTGHYLTVKDNQVVQLHP-STVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAP 737
Query: 1124 HYYK 1127
YY+
Sbjct: 738 QYYE 741
Score = 632 (227.5 bits), Expect = 8.9e-95, Sum P(2) = 8.9e-95
Identities = 131/249 (52%), Positives = 173/249 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++P L Y V+I+DEAHERTL TDIL G++K++VR RSDLK+++ SATL
Sbjct: 210 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 269
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH-ATQPLGDILVF 119
DA KF +FD+ P+ IPGR PV+I+YT PE DY++A + +++QIH + GD+L+F
Sbjct: 270 DAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLF 329
Query: 120 LTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
LTGQEEI E C I ++ + LG + ++ I+P+YS LP Q +IF P PP
Sbjct: 330 LTGQEEIDEACKRIKRE-IDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIG 388
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V ISKASA QRAG
Sbjct: 389 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 448
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 449 RTRPGKCFR 457
Score = 350 (128.3 bits), Expect = 8.9e-95, Sum P(2) = 8.9e-95
Identities = 76/217 (35%), Positives = 124/217 (57%)
Query: 1085 SLFEELPRWVLYHELVFTTKEF--MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKT 1142
S+ E P ++V + +F +V I + +L V + +P E + + ++
Sbjct: 534 SMMAEFPLDPQLAKMVIASCDFNCSNEVLSITA--MLSVPQCFVRPTEAKKAADES---- 587
Query: 1143 LGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1201
K R A + GDHL LLN+Y+ + S QWCY+NFI +RS+ A +VR+QL ++ R
Sbjct: 588 --KMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRF 645
Query: 1202 EMELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEEL 1257
+ S + +NIR+A+ G+F +A L ++G Y T K NQ V +HP S++ +
Sbjct: 646 NLPRRSTEFTSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHP-STVLDHK 704
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
P WVLY+E V TTK ++R T+I+ +WL+++AP YY+
Sbjct: 705 PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYE 741
Score = 308 (113.5 bits), Expect = 7.3e-115, Sum P(3) = 7.3e-115
Identities = 62/141 (43%), Positives = 85/141 (60%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEA--GFTKDKMKIG 719
I + + LP++ +K+ D + HQ ++ GETGSGKTTQIPQ+ + K +
Sbjct: 104 ILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVA 163
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
CTQP +EM V LG EVGY+IRFEDC+S +TI+KYMTDG L RE +++P
Sbjct: 164 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 223
Query: 780 DLASYSVMIIDEAHPKVYVID 800
L Y V+I+DEAH + D
Sbjct: 224 LLERYGVIILDEAHERTLATD 244
Score = 51 (23.0 bits), Expect = 7.3e-115, Sum P(3) = 7.3e-115
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D D+ K+RD +R ++RD++ ++ R K
Sbjct: 29 DRDERSKDRDRDRDRERDRDRDRDRDRDRERDSK 62
Score = 41 (19.5 bits), Expect = 8.2e-114, Sum P(3) = 8.2e-114
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 447 DSDDDR-KERDEFSERLKNRDKNNTKNVA 474
D D DR ++RD +R ++R++++ + A
Sbjct: 38 DRDRDRERDRDRDRDRDRDRERDSKSSSA 66
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 813 (291.2 bits), Expect = 5.8e-113, Sum P(2) = 5.8e-113
Identities = 170/363 (46%), Positives = 230/363 (63%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V PISKAS
Sbjct: 343 NGAIGRKVVVSTNIAETS-LTIDGV---VFVIDPGFAKQKVYNPRIRVESLLVSPISKAS 398
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT A+K+E++DNT PEI R NLG VL LK LGI+DL+HF
Sbjct: 399 AQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHF 458
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L AL+ G+LT LG M+EFPLDP + KML+AS ++ C
Sbjct: 459 DFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSN 518
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
EI++I +MLSV F RP + AD A+ F + GDHL LLN+Y+ + + WC
Sbjct: 519 EILSITAMLSVPQC-FVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWC 577
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
YENFI RS+K A +VR+QL ++ R + S + VNIRKA+ G+F +A L
Sbjct: 578 YENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHL 637
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++G Y T K NQ V +HP++ L + P WV+Y+E V TTK ++R VT+++ +WL +AP
Sbjct: 638 ERTGYYLTIKDNQNVQLHPSTCL-DHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAP 696
Query: 1124 HYY 1126
YY
Sbjct: 697 QYY 699
Score = 670 (240.9 bits), Expect = 2.7e-98, Sum P(2) = 2.7e-98
Identities = 137/249 (55%), Positives = 183/249 (73%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +S+P L Y V+++DEAHERTL TDIL G++K+++R RSDLKL++ SATL
Sbjct: 169 MTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATL 228
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVF 119
DA KF ++FD+AP+ ++PGR PV+I+YT PE DY++A + +++QIH + + GDIL+F
Sbjct: 229 DAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMF 288
Query: 120 LTGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPP-NA----- 172
LTGQEEIE C I ++ + LGS+I EL +P+YS LP ++Q +IF P PP NA
Sbjct: 289 LTGQEEIEEACKRIKRE-IDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIG 347
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID +++VIDPGF KQ +N R +ESL V PISKASA QR+G
Sbjct: 348 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAG 407
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 408 RTRPGKCFR 416
Score = 344 (126.2 bits), Expect = 2.7e-98, Sum P(2) = 2.7e-98
Identities = 74/208 (35%), Positives = 116/208 (55%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYE 1176
+L V + +P E + + ++ K R A + GDHL LLN+Y+ + + WCYE
Sbjct: 526 MLSVPQCFVRPNEAKKAADE------AKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYE 579
Query: 1177 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKLSK 1232
NFI RS+K A +VR+QL ++ R + S + VNIRKA+ G+F +A L +
Sbjct: 580 NFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLER 639
Query: 1233 SGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
+G Y T K NQ V +HP++ L + P WV+Y+E V TTK ++R VT+++ +WL +AP Y
Sbjct: 640 TGYYLTIKDNQNVQLHPSTCL-DHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQY 698
Query: 1293 YKPRELEDSTNKKMPKTLGKSRAELGEH 1320
Y K+ + L + R E ++
Sbjct: 699 YDLNNFPQCEAKRQLELL-QQRLETKQY 725
Score = 332 (121.9 bits), Expect = 5.8e-113, Sum P(2) = 5.8e-113
Identities = 62/148 (41%), Positives = 94/148 (63%)
Query: 653 TEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
T ++ N+ + + +LP++ ++ D + + HQ +++ GETGSGKTTQIPQ+ + +
Sbjct: 56 TPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVS 115
Query: 713 KDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
K + + CTQP EEM VKLG EVGY+IRFEDC++ +T++KYMTDG L
Sbjct: 116 KGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLL 175
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVID 800
RE +S+P L Y V+++DEAH + D
Sbjct: 176 REAMSDPMLDQYQVILLDEAHERTLATD 203
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 613 (220.8 bits), Expect = 7.2e-113, Sum P(2) = 7.2e-113
Identities = 131/343 (38%), Positives = 198/343 (57%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K +N +G+E L V +SK A Q C+RLYT ++ +
Sbjct: 375 YVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KF 433
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHH-G 915
E TVPEIQR NL + +L L A+ I +++ FDF+ P + + A+ QL LGAL H G
Sbjct: 434 EKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEHRDG 493
Query: 916 DLT--KLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
LT +GR+MA FPL+P K +L S K+ C EEI+TI ++LSV+ +I Y P +
Sbjct: 494 QLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSVD-SILYNPPSRRDEV 552
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
+ RK F GDHL LLN+Y + + + +WC ENF+ ++M +VR QL + +
Sbjct: 553 QSVRKKFVSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRAQLRDICIK 612
Query: 1034 VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1093
+ M +VS+ +T +IR+ + F A+L GSY T +Q V IHP+S LF P
Sbjct: 613 MSMPIVSSRGDTESIRRCLAHSLFTSTAELQPDGSYATTDTHQPVAIHPSSVLFHCKPAC 672
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1136
V+Y EL+FT+K +MR + ++++WL E AP +++ ++L + N
Sbjct: 673 VVYTELLFTSKCYMRDLCVVDAEWLYEAAPDFFR-KKLRTARN 714
Score = 541 (195.5 bits), Expect = 7.2e-113, Sum P(2) = 7.2e-113
Identities = 110/235 (46%), Positives = 154/235 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL-----KLLI 55
+TDG L RE +S+ L YS +I+DEAHERTLHTD+LFG+VK + R +L K+L+
Sbjct: 177 LTDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLV 236
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
SAT+D FS++F+ APV + GR+ P+ I+YTK P+ DY+ A +VS+ QIH P
Sbjct: 237 MSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSH 296
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DILVFLTGQEEIE ++ +D + L +++LP+Y++LP Q ++F P RK
Sbjct: 297 DILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRK 356
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V+++TNIAETS+TI I YV+D G K +N +G+E L V +SK A QR G
Sbjct: 357 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTG 411
Score = 291 (107.5 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 63/186 (33%), Positives = 100/186 (53%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
LL V Y P D K + GDHL LLN+Y + + + +WC EN
Sbjct: 535 LLSVDSILYNPPSRRDEVQSVRKKFVSSE-----GDHLTLLNVYRTFKNTGGNKEWCKEN 589
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ ++M +VR QL + ++ M +VS+ +T +IR+ + F A+L GSY
Sbjct: 590 FVNSKNMMLVAEVRAQLRDICIKMSMPIVSSRGDTESIRRCLAHSLFTSTAELQPDGSYA 649
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T +Q V IHP+S LF P V+Y EL+FT+K +MR + ++++WL E AP +++ ++
Sbjct: 650 TTDTHQPVAIHPSSVLFHCKPACVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDFFR-KK 708
Query: 1298 LEDSTN 1303
L + N
Sbjct: 709 LRTARN 714
Score = 274 (101.5 bits), Expect = 1.1e-84, Sum P(2) = 1.1e-84
Identities = 57/139 (41%), Positives = 84/139 (60%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
+E+ +++LPI+ + L+ +R+ ++ GETGSGKTTQIPQYL+E G + + I T
Sbjct: 74 VEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAI-IAVT 132
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP +E +LG VGY +RF+D TS+ T IK++TDG L RE +S+ L
Sbjct: 133 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLL 192
Query: 782 ASYSVMIIDEAHPKVYVID 800
YS +I+DEAH + D
Sbjct: 193 RKYSCIILDEAHERTLHTD 211
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 602 (217.0 bits), Expect = 3.3e-112, Sum P(2) = 3.3e-112
Identities = 126/343 (36%), Positives = 195/343 (56%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K +N +G+E L V +SK A Q C+RLYT ++ +
Sbjct: 359 YVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KF 417
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E TVPEIQR NL + +L L A+ + +++ FDF+ P + + A+ QL LGAL H D
Sbjct: 418 EKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDD 477
Query: 917 ---LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
LT +GR+MA FPL+P K +L S K+ C EEI+TI S+LSV+ ++ Y P +
Sbjct: 478 QLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVD-SVLYNPPARRDEV 536
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
+ RK F GDH+ LLNIY + + + WC ENF+ ++M +VR QL + +
Sbjct: 537 QSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLK 596
Query: 1034 VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1093
+ M ++S+ + ++R+ + F + A+L G+Y T +Q V IHP+S LF P
Sbjct: 597 MSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPAC 656
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1136
V+Y L++T K +MR + ++++WL E AP Y++ R+L + N
Sbjct: 657 VVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR-RKLRTARN 698
Score = 546 (197.3 bits), Expect = 3.3e-112, Sum P(2) = 3.3e-112
Identities = 109/235 (46%), Positives = 154/235 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL-----KLLI 55
+TDG L RE +S+ L YS +I+DEAHERT+HTD+LFG+VK + R +L K+++
Sbjct: 161 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIV 220
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
SAT+D FS++F+ APV + GR+ P+ I+YTK P+ DY+ A +VS+ QIH P
Sbjct: 221 MSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQ 280
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DILVFLTGQEEIE ++ +D R L +++LP+Y++LP Q ++F P RK
Sbjct: 281 DILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRK 340
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V+++TNIAETS+TI I YV+D G K +N +G+E L V +SK A QR G
Sbjct: 341 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTG 395
Score = 279 (103.3 bits), Expect = 5.0e-84, Sum P(2) = 5.0e-84
Identities = 60/139 (43%), Positives = 84/139 (60%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
+E ++SLPI+ + L+ +R+ ++ GETGSGKTTQIPQYL+E G ++ + I T
Sbjct: 58 LELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGI-IAVT 116
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP +E +LG VGY +RFED TSE T IK++TDG L RE +S+ L
Sbjct: 117 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLL 176
Query: 782 ASYSVMIIDEAHPKVYVID 800
YS +I+DEAH + D
Sbjct: 177 RKYSCVILDEAHERTIHTD 195
Score = 273 (101.2 bits), Expect = 2.4e-77, Sum P(2) = 2.4e-77
Identities = 59/186 (31%), Positives = 97/186 (52%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
LL V Y P D K + GDH+ LLNIY + + + WC EN
Sbjct: 519 LLSVDSVLYNPPARRDEVQSVRKKFISSE-----GDHITLLNIYRTFKNIGGNKDWCKEN 573
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ ++M +VR QL + ++ M ++S+ + ++R+ + F + A+L G+Y
Sbjct: 574 FVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYA 633
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T +Q V IHP+S LF P V+Y L++T K +MR + ++++WL E AP Y++ R+
Sbjct: 634 TTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR-RK 692
Query: 1298 LEDSTN 1303
L + N
Sbjct: 693 LRTARN 698
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 585 (211.0 bits), Expect = 3.7e-112, Sum P(2) = 3.7e-112
Identities = 123/242 (50%), Positives = 167/242 (69%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+KF +FF D + + GR FPVDI+Y ++P DYI A V ++++IH T
Sbjct: 212 DAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GDIL FLTGQEE+ET +L ++ R R G K K L +LP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDILAFLTGQEEVETVVSMLIEQARALARTGMK-KHLRVLPMYAGLPSFEQMKVFER 330
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQR
Sbjct: 331 VSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQR 390
Query: 228 AG 229
AG
Sbjct: 391 AG 392
Score = 563 (203.2 bits), Expect = 3.7e-112, Sum P(2) = 3.7e-112
Identities = 116/284 (40%), Positives = 179/284 (63%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQ KC+RLYT A++ +
Sbjct: 355 VYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFE-Q 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL VL LKALGI+ ++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + +F P ++ A
Sbjct: 474 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVFPSNQKSQAT 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LN+Y + + S+QWC E+F+ ++ + RA VR+QL L+ +
Sbjct: 533 RVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTV 1078
++ +S+ + + + I +G+F + A+ +G+Y+ +N+ +
Sbjct: 593 QVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRVI-YNEVI 635
Score = 317 (116.6 bits), Expect = 8.1e-84, Sum P(2) = 8.1e-84
Identities = 61/142 (42%), Positives = 89/142 (62%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ V ++Q ++I GETG GK+TQ+PQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQP +E G LG EVGY IRF+DCT T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YSV+++DEAH + D
Sbjct: 165 PLLTKYSVVMLDEAHERTLYTD 186
Score = 159 (61.0 bits), Expect = 1.5e-69, Sum P(2) = 1.5e-69
Identities = 32/112 (28%), Positives = 66/112 (58%)
Query: 1135 TNKKMPKT-LGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQ 1193
+N+K T + + A GDHL +LN+Y + + S+QWC E+F+ ++ + RA VR+Q
Sbjct: 525 SNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQ 584
Query: 1194 LIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTV 1245
L L+ + ++ +S+ + + + I +G+F + A+ +G+Y+ +N+ +
Sbjct: 585 LKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRVI-YNEVI 635
Score = 125 (49.1 bits), Expect = 5.9e-66, Sum P(2) = 5.9e-66
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSG 1067
YE FI+H K ++ +E + LV T ++K + + + K+S G
Sbjct: 552 YEAFIKHN--KSSQWCQEHFLNY-----KGLVRAATVRDQLKKLLVK---FQVPKMSSEG 601
Query: 1068 SYKTAKHNQTVMIHPNSSLFEELPRW-VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
N++ F + V+Y+E++ T+K +MR VT IES WLLE+APH+Y
Sbjct: 602 DPDPVLRCIVSGFFANAARFHSTGAYRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
Query: 1127 K 1127
+
Sbjct: 662 Q 662
Score = 125 (49.1 bits), Expect = 5.9e-66, Sum P(2) = 5.9e-66
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 1175 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSG 1234
YE FI+H K ++ +E + LV T ++K + + + K+S G
Sbjct: 552 YEAFIKHN--KSSQWCQEHFLNY-----KGLVRAATVRDQLKKLLVK---FQVPKMSSEG 601
Query: 1235 SYKTAKHNQTVMIHPNSSLFEELPRW-VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
N++ F + V+Y+E++ T+K +MR VT IES WLLE+APH+Y
Sbjct: 602 DPDPVLRCIVSGFFANAARFHSTGAYRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
Query: 1294 K 1294
+
Sbjct: 662 Q 662
Score = 39 (18.8 bits), Expect = 1.6e-54, Sum P(2) = 1.6e-54
Identities = 18/82 (21%), Positives = 35/82 (42%)
Query: 209 TGMESL-TVVP--ISKASANQRAGVITGFNPLSDFRGCAHVLGEEVLRGCAHVLGEEVLR 265
TG E + TVV I +A A R G+ L + G +V +H + + ++
Sbjct: 282 TGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVA 341
Query: 266 PEVSQPFRSFGYLGVMQDCRYI 287
V++ + + + DC ++
Sbjct: 342 TNVAETSITISGIVYVIDCGFM 363
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 82 FPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIET 128
FP++ + K C IL I A + ++ VF + Q+ T
Sbjct: 486 FPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQAT 532
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 824 (295.1 bits), Expect = 6.5e-112, Sum P(2) = 6.5e-112
Identities = 173/380 (45%), Positives = 232/380 (61%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V PISKAS
Sbjct: 354 NGAISRKCVISTNIAETS-LTIDGV---VFVIDPGFSKQKVYNPRIRVESLLVCPISKAS 409
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AY E++D T PEI R NLG+ VL LK LG DL+HF
Sbjct: 410 AMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHF 469
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L A+N G+LT+LG MAEFPLDP + KML+ S + C
Sbjct: 470 DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSN 529
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
EI++I +MLSV + RP + AD A+ F + GDHL LLN+Y+ + QWC
Sbjct: 530 EILSITAMLSVPQC-WVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWC 588
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +R+MK A VR QL ++ + + VS ++ +NIRKA+ AG+F +A L
Sbjct: 589 YDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHL 648
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
+SG Y T K NQ V +HP S++ + P W LY+E V TTK F+R VT++ +WLL++AP
Sbjct: 649 ERSGHYVTVKDNQLVNLHP-STVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAP 707
Query: 1124 HYYKPRELEDSTNKKMPKTL 1143
YY D K+ T+
Sbjct: 708 QYYDLDNFPDGDTKRKLTTV 727
Score = 629 (226.5 bits), Expect = 4.3e-97, Sum P(2) = 4.3e-97
Identities = 133/249 (53%), Positives = 173/249 (69%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TDG L RE ++ P L Y V+I+DEAHERTL TDIL GL+K+IVR R+D+K++I SATLD
Sbjct: 181 TDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLD 240
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVFL 120
A KF +F+D P+ +PGR FPV+I++T E DY++A + +++QIH + + GDIL+FL
Sbjct: 241 AGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFL 300
Query: 121 TGQEEIE-TCNEILQDR-VRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
TGQEEIE C I DR ++ LG+ L +P+YS LP Q +IF P PPN +
Sbjct: 301 TGQEEIEEACKRI--DREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAIS 358
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RK V++TNIAETSLTID +++VIDPGF KQ +N R +ESL V PISKASA QRAG
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 419 RTKPGKCFR 427
Score = 375 (137.1 bits), Expect = 4.3e-97, Sum P(2) = 4.3e-97
Identities = 83/233 (35%), Positives = 128/233 (54%)
Query: 1085 SLFEELPRWVLYHELVFTTKEF--MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKT 1142
SL E P +++ T+ E ++ I + +L V + +P E+ ++
Sbjct: 504 SLMAEFPLDPQLAKMLITSTELNCSNEILSITA--MLSVPQCWVRPNEMRTEADE----- 556
Query: 1143 LGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1201
K+R A + GDHL LLN+Y+ + QWCY+NFI +R+MK A VR QL ++ +
Sbjct: 557 -AKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKY 615
Query: 1202 EMELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEEL 1257
+ VS ++ +NIRKA+ AG+F +A L +SG Y T K NQ V +HP S++ +
Sbjct: 616 NLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP-STVLDHK 674
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTL 1310
P W LY+E V TTK F+R VT++ +WLL++AP YY D K+ T+
Sbjct: 675 PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTV 727
Score = 310 (114.2 bits), Expect = 6.5e-112, Sum P(2) = 6.5e-112
Identities = 65/148 (43%), Positives = 89/148 (60%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK---- 717
I E + LP++ +K+ ++ +R++Q + + GETGSGKTTQIPQ+ E F K + +
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVE--FMKQQQQGQPP 126
Query: 718 -----IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
+ CTQP EEM V LG EVGY+IRFEDC SERT++KY TDG L
Sbjct: 127 GQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLL 186
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVID 800
RE ++ P L Y V+I+DEAH + D
Sbjct: 187 REAMNSPLLDKYKVLILDEAHERTLATD 214
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 824 (295.1 bits), Expect = 6.5e-112, Sum P(2) = 6.5e-112
Identities = 173/380 (45%), Positives = 232/380 (61%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
+G + R+ + ++A S + ID V+VIDPGF KQ +N R +ESL V PISKAS
Sbjct: 354 NGAISRKCVISTNIAETS-LTIDGV---VFVIDPGFSKQKVYNPRIRVESLLVCPISKAS 409
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q KCFRLYT AY E++D T PEI R NLG+ VL LK LG DL+HF
Sbjct: 410 AMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHF 469
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
DF+DPP ETL+ ALE L L A+N G+LT+LG MAEFPLDP + KML+ S + C
Sbjct: 470 DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSN 529
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWC 1007
EI++I +MLSV + RP + AD A+ F + GDHL LLN+Y+ + QWC
Sbjct: 530 EILSITAMLSVPQC-WVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWC 588
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTET----VNIRKAITAGYFYHIAKL 1063
Y+NFI +R+MK A VR QL ++ + + VS ++ +NIRKA+ AG+F +A L
Sbjct: 589 YDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHL 648
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
+SG Y T K NQ V +HP S++ + P W LY+E V TTK F+R VT++ +WLL++AP
Sbjct: 649 ERSGHYVTVKDNQLVNLHP-STVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAP 707
Query: 1124 HYYKPRELEDSTNKKMPKTL 1143
YY D K+ T+
Sbjct: 708 QYYDLDNFPDGDTKRKLTTV 727
Score = 629 (226.5 bits), Expect = 4.3e-97, Sum P(2) = 4.3e-97
Identities = 133/249 (53%), Positives = 173/249 (69%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TDG L RE ++ P L Y V+I+DEAHERTL TDIL GL+K+IVR R+D+K++I SATLD
Sbjct: 181 TDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLD 240
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVFL 120
A KF +F+D P+ +PGR FPV+I++T E DY++A + +++QIH + + GDIL+FL
Sbjct: 241 AGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFL 300
Query: 121 TGQEEIE-TCNEILQDR-VRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------A 172
TGQEEIE C I DR ++ LG+ L +P+YS LP Q +IF P PPN +
Sbjct: 301 TGQEEIEEACKRI--DREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAIS 358
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RK V++TNIAETSLTID +++VIDPGF KQ +N R +ESL V PISKASA QRAG
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 233 GFNPLSDFR 241
P FR
Sbjct: 419 RTKPGKCFR 427
Score = 375 (137.1 bits), Expect = 4.3e-97, Sum P(2) = 4.3e-97
Identities = 83/233 (35%), Positives = 128/233 (54%)
Query: 1085 SLFEELPRWVLYHELVFTTKEF--MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKT 1142
SL E P +++ T+ E ++ I + +L V + +P E+ ++
Sbjct: 504 SLMAEFPLDPQLAKMLITSTELNCSNEILSITA--MLSVPQCWVRPNEMRTEADE----- 556
Query: 1143 LGKSR-AELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1201
K+R A + GDHL LLN+Y+ + QWCY+NFI +R+MK A VR QL ++ +
Sbjct: 557 -AKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKY 615
Query: 1202 EMELVSNPTET----VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEEL 1257
+ VS ++ +NIRKA+ AG+F +A L +SG Y T K NQ V +HP S++ +
Sbjct: 616 NLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP-STVLDHK 674
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTL 1310
P W LY+E V TTK F+R VT++ +WLL++AP YY D K+ T+
Sbjct: 675 PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTV 727
Score = 310 (114.2 bits), Expect = 6.5e-112, Sum P(2) = 6.5e-112
Identities = 65/148 (43%), Positives = 89/148 (60%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK---- 717
I E + LP++ +K+ ++ +R++Q + + GETGSGKTTQIPQ+ E F K + +
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVE--FMKQQQQGQPP 126
Query: 718 -----IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
+ CTQP EEM V LG EVGY+IRFEDC SERT++KY TDG L
Sbjct: 127 GQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLL 186
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVID 800
RE ++ P L Y V+I+DEAH + D
Sbjct: 187 REAMNSPLLDKYKVLILDEAHERTLATD 214
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 629 (226.5 bits), Expect = 7.4e-112, Sum P(2) = 7.4e-112
Identities = 145/374 (38%), Positives = 224/374 (59%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE- 855
YVID G K +N + GM++L VVPIS A+A+Q +RLYT A + +
Sbjct: 661 YVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYRLYTEKATEPDS 720
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+ +PEIQR NL N +L+LK+L +ND+ F FLDPPP + L +L L+A+GAL++ G
Sbjct: 721 MYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLYDLWAIGALDNLG 780
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEK--YKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+LTKLG M +FP++P + K++L S + + C EE+VTI +MLSV IF RPK++ A
Sbjct: 781 ELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPN-IFNRPKERANEA 839
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWA------DADFS--TQWCYENFIQHRSMKRARDVRE 1025
D AR+ F + DHL LLN++NQW +++ WC +NF+Q +S+ RA+D++
Sbjct: 840 DMAREKFIISESDHLTLLNVFNQWNINLNKFKGNYTKINNWCNKNFLQLKSLYRAKDIKH 899
Query: 1026 QLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSK---SGS--YKTAKHNQTVM- 1079
QL+ ++++ ++ ++ + T+ +IRK + A ++ AKL+K +G + +H+ M
Sbjct: 900 QLMLIMKKNKLAILKSKTDD-DIRKCLCASFYQQSAKLTKMNLNGQPEFVNLRHSYMKMF 958
Query: 1080 IHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNK 1137
+HP SSL + +V+YHELV T KE+M VT ++ WLLE YK + DS
Sbjct: 959 LHPTSSLLDSNLSTNYVIYHELVLTKKEYMNCVTTVDPIWLLEYG---YKFFGVADSHRN 1015
Query: 1138 KMPKT--LGKSRAE 1149
K+ L K + E
Sbjct: 1016 KIDSEAILNKQKFE 1029
Score = 559 (201.8 bits), Expect = 7.4e-112, Sum P(2) = 7.4e-112
Identities = 118/238 (49%), Positives = 167/238 (70%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MT+G L RE L++P LA+YS +I+DEAHER+L+TDIL GL K+++ R DLKL+++SAT+
Sbjct: 462 MTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATM 521
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQ--------P 112
+A +F++FF AP F IPGR FPV++++ + DY++ V +L IH +
Sbjct: 522 NANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNAN 581
Query: 113 LGDILVFLTGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN 171
GDILVF+TGQE+IE TC +++++++ L L I P+YS +P D+Q KIF T
Sbjct: 582 DGDILVFMTGQEDIEITC-DLIKEKLNLLEDP-PPLDIFPIYSTMPQDLQKKIFNKTNLQ 639
Query: 172 ARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RKVV+ATNIAETSLT+D I YVID G K +N + GM++L VVPIS A+A+QR+G
Sbjct: 640 RRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSG 697
Score = 347 (127.2 bits), Expect = 8.9e-90, Sum P(3) = 8.9e-90
Identities = 74/157 (47%), Positives = 103/157 (65%)
Query: 647 KGEEEMTE-KQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY 705
K EE+ + + K +I++ +KSLP + + DL+ +RD+QV I+ GETGSGKTTQ+ Q+
Sbjct: 335 KQEEKNADVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQF 394
Query: 706 LHEAGF------TKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCT-S 758
L+E GF +K I CTQP EEM KLG EVGY+IRFED T +
Sbjct: 395 LYEDGFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDN 454
Query: 759 ERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
++T+IKYMT+G L RE L++P LA+YS +I+DEAH +
Sbjct: 455 KKTVIKYMTEGILLREILADPMLANYSCIIMDEAHER 491
Score = 245 (91.3 bits), Expect = 7.8e-71, Sum P(2) = 7.8e-71
Identities = 70/236 (29%), Positives = 121/236 (51%)
Query: 1099 LVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLL 1158
L+ T EF + +L V + +P+E + + K + DHL LL
Sbjct: 803 LLSTQPEFHCSEEVVTIVAMLSVPNIFNRPKERANEADMAREKFIISE-----SDHLTLL 857
Query: 1159 NIYNQWA------DADFS--TQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT 1210
N++NQW +++ WC +NF+Q +S+ RA+D++ QL+ ++++ ++ ++ + T
Sbjct: 858 NVFNQWNINLNKFKGNYTKINNWCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSKT 917
Query: 1211 ETVNIRKAITAGYFYHIAKLSK---SGS--YKTAKHNQTVM-IHPNSSLFEE--LPRWVL 1262
+ +IRK + A ++ AKL+K +G + +H+ M +HP SSL + +V+
Sbjct: 918 DD-DIRKCLCASFYQQSAKLTKMNLNGQPEFVNLRHSYMKMFLHPTSSLLDSNLSTNYVI 976
Query: 1263 YHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKT--LGKSRAE 1316
YHELV T KE+M VT ++ WLLE YK + DS K+ L K + E
Sbjct: 977 YHELVLTKKEYMNCVTTVDPIWLLEYG---YKFFGVADSHRNKIDSEAILNKQKFE 1029
Score = 48 (22.0 bits), Expect = 8.9e-90, Sum P(3) = 8.9e-90
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 511 KYLEKRKEDKVA---ELEADILDDEY 533
K L K+KEDK +L+ D+ DD++
Sbjct: 63 KILNKKKEDKPIVDDDLDLDLDDDDF 88
Score = 43 (20.2 bits), Expect = 4.6e-57, Sum P(3) = 4.6e-57
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 450 DDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D +E + KN D N TK+ +Q K
Sbjct: 326 DTANTTEEIKQEEKNADVNETKHQDIQQQRK 356
Score = 40 (19.1 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 648 GEE--EMT-EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
G+E E+T + K+KLN+ E L I+P + +D Q I + +
Sbjct: 591 GQEDIEITCDLIKEKLNLLEDPPPLDIFPIYSTM---PQDLQKKIFNKTNLQRRKVVVAT 647
Query: 705 YLHEAGFTKDKMK--IGC 720
+ E T D +K I C
Sbjct: 648 NIAETSLTVDGIKYVIDC 665
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 577 (208.2 bits), Expect = 7.2e-111, Sum P(2) = 7.2e-111
Identities = 120/242 (49%), Positives = 166/242 (68%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQT 271
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GD+L FLTGQEE+ET +L ++ R R G K + L +LP+Y+ LP+ Q K+F
Sbjct: 272 EGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFER 330
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
+ RKV++ATN+AETS+TI I+YVID GF K +N RT +E L VVP+S+ASANQR
Sbjct: 331 VSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQR 390
Query: 228 AG 229
AG
Sbjct: 391 AG 392
Score = 559 (201.8 bits), Expect = 7.2e-111, Sum P(2) = 7.2e-111
Identities = 117/284 (41%), Positives = 178/284 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID GF K +N RT +E L VVP+S+ASANQ KC+RLYT A+ +
Sbjct: 355 VYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFD-K 413
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L +TVPE+QR NL +L LKALGI++++ F F+ PPP +++V ALE LYALG L+
Sbjct: 414 LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDC 473
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
LT+ LG R+AEFPL+PM KMLL S + C +EI++IA+M+ + IF P ++ HA
Sbjct: 474 RLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPPNQKSHAI 532
Query: 975 TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1034
+ F + GDHL +LNIY + + ++WC E+F+ ++ + RA VREQL L+ +
Sbjct: 533 RVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKF 592
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTV 1078
++ S+ + + + I +G+F + A+ +G+Y+ +N+ +
Sbjct: 593 QVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRVI-YNEVI 635
Score = 323 (118.8 bits), Expect = 5.1e-84, Sum P(2) = 5.1e-84
Identities = 62/142 (43%), Positives = 90/142 (63%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
L+IE+ ++ LP++ + ++ + ++Q ++I GETG GK+TQIPQYL EAG+T + +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTIIKYMTDGTLHREFLSE 778
TQP EE G LG EVGY IRF+DCT + T IK++TDG L RE + +
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 164
Query: 779 PDLASYSVMIIDEAHPKVYVID 800
P L YSV+++DEAH + D
Sbjct: 165 PLLTKYSVIMLDEAHERTLYTD 186
Score = 150 (57.9 bits), Expect = 1.0e-67, Sum P(2) = 1.0e-67
Identities = 28/94 (29%), Positives = 56/94 (59%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL +LNIY + + ++WC E+F+ ++ + RA VREQL L+ + ++ S+ +
Sbjct: 543 GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGD 602
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTV 1245
+ + I +G+F + A+ +G+Y+ +N+ +
Sbjct: 603 PDLVLRCIVSGFFANAARFHSTGAYRVI-YNEVI 635
Score = 119 (46.9 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSG 1067
YE FI+H K ++ +E + LV T ++K + + + + S G
Sbjct: 552 YEAFIKHN--KDSKWCQEHFLNY-----KGLVRAATVREQLKKLLVK---FQVPRKSSEG 601
Query: 1068 SYKTAKHNQTVMIHPNSSLFEELPRW-VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
N++ F + V+Y+E++ T+K +MR VT IES WLLE+APH+Y
Sbjct: 602 DPDLVLRCIVSGFFANAARFHSTGAYRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
Query: 1127 K 1127
+
Sbjct: 662 Q 662
Score = 119 (46.9 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 1175 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSG 1234
YE FI+H K ++ +E + LV T ++K + + + + S G
Sbjct: 552 YEAFIKHN--KDSKWCQEHFLNY-----KGLVRAATVREQLKKLLVK---FQVPRKSSEG 601
Query: 1235 SYKTAKHNQTVMIHPNSSLFEELPRW-VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
N++ F + V+Y+E++ T+K +MR VT IES WLLE+APH+Y
Sbjct: 602 DPDLVLRCIVSGFFANAARFHSTGAYRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
Query: 1294 K 1294
+
Sbjct: 662 Q 662
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 598 (215.6 bits), Expect = 8.0e-111, Sum P(2) = 8.0e-111
Identities = 126/343 (36%), Positives = 193/343 (56%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K +N +G+E L V +SK A Q C+RLYT ++ +
Sbjct: 368 YVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KF 426
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ TVPEIQR NL + +L L A+ + +++ FDF+ P + + A+ QL LGAL H D
Sbjct: 427 DKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDD 486
Query: 917 ---LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
LT +GR+MA FPL+P K +L S K+ C EEI+TI S+LSV+ ++ + P +
Sbjct: 487 QLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVD-SVLHNPPSRREEV 545
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
RK F GDH+ LLNIY + + + WC ENF+ ++M +VR QL + +
Sbjct: 546 QGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLK 605
Query: 1034 VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1093
+ M + S+ + ++R+ + F A+L G+Y T +Q V IHP+S LF P
Sbjct: 606 MSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 665
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1136
V+Y EL++T K +MR + I+++WL E AP Y++ R+L + N
Sbjct: 666 VVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR-RKLRTARN 707
Score = 537 (194.1 bits), Expect = 8.0e-111, Sum P(2) = 8.0e-111
Identities = 107/235 (45%), Positives = 154/235 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL-----KLLI 55
+TDG L RE +S+ L YS +I+DEAHERT+HTD+LFG+VK + R +L K+++
Sbjct: 170 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIV 229
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
SAT+D FS++F+ APV + GR+ P+ ++YTK P+ DY+ A +VS+ QIH P
Sbjct: 230 MSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQ 289
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DILVFLTGQEEIE ++ +D + L +++LP+Y++LP Q ++F P RK
Sbjct: 290 DILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRK 349
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V+++TNIAETS+TI I YV+D G K +N +G+E L V +SK A QR G
Sbjct: 350 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTG 404
Score = 278 (102.9 bits), Expect = 1.7e-83, Sum P(2) = 1.7e-83
Identities = 59/139 (42%), Positives = 84/139 (60%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
+E ++SLPI+ + L+ +R+ ++ GETGSGKTTQIPQYL+E G ++ + I T
Sbjct: 67 VELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGI-IAVT 125
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP +E +LG VGY +RF+D TSE T IK++TDG L RE +S+ L
Sbjct: 126 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLL 185
Query: 782 ASYSVMIIDEAHPKVYVID 800
YS +I+DEAH + D
Sbjct: 186 RKYSCVILDEAHERTIHTD 204
Score = 277 (102.6 bits), Expect = 8.6e-77, Sum P(2) = 8.6e-77
Identities = 54/152 (35%), Positives = 88/152 (57%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDH+ LLNIY + + + WC ENF+ ++M +VR QL + ++ M + S+ +
Sbjct: 557 GDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGD 616
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
++R+ + F A+L G+Y T +Q V IHP+S LF P V+Y EL++T K
Sbjct: 617 VESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNK 676
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1303
+MR + I+++WL E AP Y++ R+L + N
Sbjct: 677 CYMRDLCVIDAQWLYEAAPEYFR-RKLRTARN 707
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 598 (215.6 bits), Expect = 8.0e-111, Sum P(2) = 8.0e-111
Identities = 126/343 (36%), Positives = 193/343 (56%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K +N +G+E L V +SK A Q C+RLYT ++ +
Sbjct: 278 YVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KF 336
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ TVPEIQR NL + +L L A+ + +++ FDF+ P + + A+ QL LGAL H D
Sbjct: 337 DKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDD 396
Query: 917 ---LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
LT +GR+MA FPL+P K +L S K+ C EEI+TI S+LSV+ ++ + P +
Sbjct: 397 QLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVD-SVLHNPPSRREEV 455
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
RK F GDH+ LLNIY + + + WC ENF+ ++M +VR QL + +
Sbjct: 456 QGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLK 515
Query: 1034 VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1093
+ M + S+ + ++R+ + F A+L G+Y T +Q V IHP+S LF P
Sbjct: 516 MSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 575
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1136
V+Y EL++T K +MR + I+++WL E AP Y++ R+L + N
Sbjct: 576 VVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR-RKLRTARN 617
Score = 537 (194.1 bits), Expect = 8.0e-111, Sum P(2) = 8.0e-111
Identities = 107/235 (45%), Positives = 154/235 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL-----KLLI 55
+TDG L RE +S+ L YS +I+DEAHERT+HTD+LFG+VK + R +L K+++
Sbjct: 80 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIV 139
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
SAT+D FS++F+ APV + GR+ P+ ++YTK P+ DY+ A +VS+ QIH P
Sbjct: 140 MSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQ 199
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DILVFLTGQEEIE ++ +D + L +++LP+Y++LP Q ++F P RK
Sbjct: 200 DILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRK 259
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V+++TNIAETS+TI I YV+D G K +N +G+E L V +SK A QR G
Sbjct: 260 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTG 314
Score = 277 (102.6 bits), Expect = 8.6e-77, Sum P(2) = 8.6e-77
Identities = 54/152 (35%), Positives = 88/152 (57%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDH+ LLNIY + + + WC ENF+ ++M +VR QL + ++ M + S+ +
Sbjct: 467 GDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGD 526
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
++R+ + F A+L G+Y T +Q V IHP+S LF P V+Y EL++T K
Sbjct: 527 VESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNK 586
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1303
+MR + I+++WL E AP Y++ R+L + N
Sbjct: 587 CYMRDLCVIDAQWLYEAAPEYFR-RKLRTARN 617
Score = 139 (54.0 bits), Expect = 7.7e-69, Sum P(2) = 7.7e-69
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 747 VGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
VGY +RF+D TSE T IK++TDG L RE +S+ L YS +I+DEAH + D
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTD 114
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 606 (218.4 bits), Expect = 2.0e-110, Sum P(2) = 2.0e-110
Identities = 136/344 (39%), Positives = 202/344 (58%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYVID G+ K +N +T +SL +VP+SKASA Q K +RLYT Y+
Sbjct: 338 VYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYE-A 396
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L PE++R L A+L LKALGI +++ FDF PPP + L+ ALE L+AL A++ G
Sbjct: 397 LAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQG 456
Query: 916 DLTK-LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
+LTK +G +AE P M+ KML S + C EEI+TI ++L V +IF RP +
Sbjct: 457 NLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQ-SIFSRPASAVAQQS 515
Query: 975 --TARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQ 1032
A + F + GD + +LN Y + + + ++C + F+ +R++KRA +REQLI + +
Sbjct: 516 GRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVAR 575
Query: 1033 R-VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1091
+ + + S + + K ITAG+F +A L SG Y+ + IHPNS+L+ LP
Sbjct: 576 KKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYT-LP 634
Query: 1092 R--WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELED 1133
+ +V+Y EL+ TTK FM VT I+ +WL E+APHYY+ + D
Sbjct: 635 QAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQQTTVRD 678
Score = 525 (189.9 bits), Expect = 2.0e-110, Sum P(2) = 2.0e-110
Identities = 113/235 (48%), Positives = 155/235 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MT+G L RE L++P L Y V+I+DEAHER + TD++ GL+K I+R RS LKL+ISSAT+
Sbjct: 143 MTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATI 202
Query: 61 DAQKFSEFFD-----DAPV-FRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG 114
DA FSEFF + V I GR PV +Y P ADY+ V ++ ++H +P G
Sbjct: 203 DASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPG 262
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DIL FLTGQEE+ ++L++ + S+ + L +LP+Y ++ + Q +F P RK
Sbjct: 263 DILAFLTGQEEVLEALDLLREYIA--SSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRK 320
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
VVLATNIAETS+TI I+YVID G+ K +N +T +SL +VP+SKASA QRAG
Sbjct: 321 VVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAG 375
Score = 277 (102.6 bits), Expect = 3.0e-84, Sum P(2) = 3.0e-84
Identities = 57/141 (40%), Positives = 85/141 (60%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
+ + E ++ LPI ++ ++ + HQV+I+ GETGSGK+TQ+PQYL+E G+ K IG
Sbjct: 38 MGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGW-HTKGLIG 96
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
T+P +E G +G VGY +RF + S T IK+MT+G L RE L++P
Sbjct: 97 ITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADP 156
Query: 780 DLASYSVMIIDEAHPKVYVID 800
L Y V+I+DEAH + + D
Sbjct: 157 LLTQYGVIIVDEAHERNMLTD 177
Score = 272 (100.8 bits), Expect = 5.7e-75, Sum P(2) = 5.7e-75
Identities = 69/223 (30%), Positives = 118/223 (52%)
Query: 1082 PNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK 1141
P L ELP + ++++ + + I LL+V + +P S +
Sbjct: 461 PVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPA----SAVAQQSG 516
Query: 1142 TLGKSRAELG-GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1200
+ + E+ GD + +LN Y + + + ++C + F+ +R++KRA +REQLI + ++
Sbjct: 517 RIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARK 576
Query: 1201 -VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPR 1259
+ + S + + K ITAG+F +A L SG Y+ + IHPNS+L+ LP+
Sbjct: 577 KYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYT-LPQ 635
Query: 1260 --WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELED 1300
+V+Y EL+ TTK FM VT I+ +WL E+APHYY+ + D
Sbjct: 636 AQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQQTTVRD 678
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 589 (212.4 bits), Expect = 2.2e-110, Sum P(2) = 2.2e-110
Identities = 128/338 (37%), Positives = 188/338 (55%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K +N +G+E L V +SK A Q C+RLYT ++ +
Sbjct: 277 YVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRAGRAGREDSGICYRLYTENEFE-KF 335
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E TVPEIQR NL + +L L A+ + +++ FDF+ P + + A+ QL LGAL +
Sbjct: 336 EKMTVPEIQRCNLASVLLQLLAMKVPNVLTFDFMSKPSPDHMQAAVAQLDLLGALERKDN 395
Query: 917 ---LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
LT +GR+MA FPL+P K +L S K+ C EEI+TI S+LSV+ ++ Y P +
Sbjct: 396 QLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVSLLSVD-SVLYNPPSRRDEV 454
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
RK F GDH+ LLNIY + WC ENF+ R+M A +VR QL + +
Sbjct: 455 QAMRKKFLSSEGDHITLLNIYRTFKSLGGDKDWCRENFVNSRNMMLAAEVRAQLRDICLK 514
Query: 1034 VEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1093
+ M +VS + +IR+ + F A+L G+Y T Q V IHP+S+LF P
Sbjct: 515 MSMPMVSCRGDVESIRRCLAHSLFMSAAELQPDGTYTTTDSRQPVAIHPSSALFHCRPAC 574
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPREL 1131
V+Y EL+ T+K +MR + + ++WL E AP Y++ R+L
Sbjct: 575 VVYTELLHTSKCYMRDLCVVAAEWLYEAAPDYFR-RKL 611
Score = 542 (195.9 bits), Expect = 2.2e-110, Sum P(2) = 2.2e-110
Identities = 109/235 (46%), Positives = 154/235 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL-----KLLI 55
+TDG L RE +S+ L YS +I+DEAHERT+HTD+LFG+VK R R +L K+++
Sbjct: 79 LTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRRRKELRKLPLKVIV 138
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
SAT+D FS++F+ A V + GR+ P+ ++YTK P+ DY+ A +VS+ QIH P
Sbjct: 139 MSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVFQIHQEAPSSQ 198
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DILVFLTGQEEIE ++ +D + L +++LP+Y++LP Q ++F P RK
Sbjct: 199 DILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQGAPKGCRK 258
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V++ATNIAETS+TI I YV+D G K +N +G+E L V +SK A QRAG
Sbjct: 259 VIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRAG 313
Score = 284 (105.0 bits), Expect = 4.5e-78, Sum P(2) = 4.5e-78
Identities = 75/241 (31%), Positives = 115/241 (47%)
Query: 1060 IAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEF--MRQVTEIESKW 1117
+A+L G+ + K NQ + P P + + + + +F ++ I S
Sbjct: 381 VAQLDLLGALER-KDNQLTLT-PIGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVS-- 436
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
LL V Y P D K L GDH+ LLNIY + WC EN
Sbjct: 437 LLSVDSVLYNPPSRRDEVQAMRKKFLSSE-----GDHITLLNIYRTFKSLGGDKDWCREN 491
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ R+M A +VR QL + ++ M +VS + +IR+ + F A+L G+Y
Sbjct: 492 FVNSRNMMLAAEVRAQLRDICLKMSMPMVSCRGDVESIRRCLAHSLFMSAAELQPDGTYT 551
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T Q V IHP+S+LF P V+Y EL+ T+K +MR + + ++WL E AP Y++ R+
Sbjct: 552 TTDSRQPVAIHPSSALFHCRPACVVYTELLHTSKCYMRDLCVVAAEWLYEAAPDYFR-RK 610
Query: 1298 L 1298
L
Sbjct: 611 L 611
Score = 239 (89.2 bits), Expect = 2.1e-78, Sum P(2) = 2.1e-78
Identities = 50/111 (45%), Positives = 67/111 (60%)
Query: 690 IEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGY 749
+ GETGSGKTTQ+PQYL+E G + + I TQP +E +LG VGY
Sbjct: 4 LSGETGSGKTTQLPQYLYEGGIGRQGV-IAVTQPRRVAAISLATRVSDEKRTELGKLVGY 62
Query: 750 AIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
+RF+D +SE T IK++TDG L RE +S+ L YS +I+DEAH + D
Sbjct: 63 TVRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTD 113
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 782 (280.3 bits), Expect = 4.6e-110, Sum P(2) = 4.6e-110
Identities = 155/350 (44%), Positives = 219/350 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+V+DPGF KQ +N R+ +ESL V PISKASANQ KCFRLYT A+K
Sbjct: 361 VFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKEL 420
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+ T PEI R NL + VL L LG+ DL+HFDF+DPP +TL+ ALE L+ LGAL+ G
Sbjct: 421 MIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEG 480
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT++G M+EFPLDP + KML+ S + C EI+TIA+MLS F RPKD I AD+
Sbjct: 481 QLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNC-FMRPKDNRIEADS 539
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
A+K+F GDHL +LN+Y+ + WCY+NF+ HR++K+A VR QL ++ R +
Sbjct: 540 AKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFK 599
Query: 1036 MELVSNPTETV----NIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELP 1091
+ LVS + NI+K I AG+F +AK K Y T Q+V+ HP++ L P
Sbjct: 600 LPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTRR-P 658
Query: 1092 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK 1141
+ +Y+E V T++ ++R +T+++ WLLE+AP Y+K + T + + +
Sbjct: 659 EFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKETIQR 708
Score = 634 (228.2 bits), Expect = 5.5e-91, Sum P(2) = 5.5e-91
Identities = 137/282 (48%), Positives = 188/282 (66%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +S+P L Y V+I+DEAHERTL TDILFGL+KDI++ R DLKL++ SATL
Sbjct: 174 LTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATL 233
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A KF ++F++AP+ ++PGR PV+I+YT+ DY+++ V +++ IH + GDILVFL
Sbjct: 234 EAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFL 293
Query: 121 TGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
TG+EEIE TC +I Q R G + + LP+YS+LP Q+KIF RK +++T
Sbjct: 294 TGEEEIEDTCAKI-QRETRERG--LPPMKTLPLYSSLPIYQQSKIF--DTCKERKCIVST 348
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
NIAETSLTID I++V+DPGF KQ +N R+ +ESL V PISKASANQRAG P
Sbjct: 349 NIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKC 408
Query: 240 FRGCAHVLGEEVLRGCAHVLGEEVLRPEVSQPFRSFGYLGVM 281
FR +E++ H E+LR ++ LGV+
Sbjct: 409 FRLYTEKAFKELMIQQTH---PEILRSNLASVVLQLLKLGVV 447
Score = 338 (124.0 bits), Expect = 4.6e-110, Sum P(2) = 4.6e-110
Identities = 66/144 (45%), Positives = 93/144 (64%)
Query: 657 KKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKM 716
K+ I E +K LP++ K+D I ++++QV+I+ GETGSGKTTQIPQ++ +AG +
Sbjct: 65 KRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGK 124
Query: 717 KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
+G TQP EEM +LG EVGY+IRFE+ +S RT +KY+TDG L RE +
Sbjct: 125 MVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESM 184
Query: 777 SEPDLASYSVMIIDEAHPKVYVID 800
S+P L Y V+I+DEAH + D
Sbjct: 185 SDPTLNKYDVIILDEAHERTLSTD 208
Score = 312 (114.9 bits), Expect = 5.5e-91, Sum P(2) = 5.5e-91
Identities = 59/168 (35%), Positives = 97/168 (57%)
Query: 1145 KSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
KS GDHL +LN+Y+ + WCY+NF+ HR++K+A VR QL ++ R ++
Sbjct: 542 KSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLP 601
Query: 1205 LVSNPTETV----NIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRW 1260
LVS + NI+K I AG+F +AK K Y T Q+V+ HP++ L P +
Sbjct: 602 LVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTRR-PEF 660
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK 1308
+Y+E V T++ ++R +T+++ WLLE+AP Y+K + T + + +
Sbjct: 661 CIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKETIQR 708
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 792 (283.9 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 161/352 (45%), Positives = 227/352 (64%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYV+DPGF KQ +N R +ESL V PISKASA Q KCFRLYT A++ E
Sbjct: 371 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKE 430
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L + T PEI R NL + VL LK LGI+DL+HFD++DPP ET++ ALE+L L L+ +G
Sbjct: 431 LIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNG 490
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
DLT LGR+ +EFPLDP + ML+ S ++ C E++++ ++LSV +F RP AD
Sbjct: 491 DLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPN-VFVRPNSARKLADE 549
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F GDHL LLN+Y+ + + + WC+ +F+ HR++ A +VR+QL ++R E
Sbjct: 550 MRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQE 609
Query: 1036 MELVSNPTET----VNIRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEEL 1090
+EL+S P + VNIR+A+ +G+F +AK S +G +Y T K NQ V +HP+ L
Sbjct: 610 VELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-SVT 668
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKT 1142
P WV+Y+E V TTK F+R VT I +WL+E+AP+YY +L+D N K K+
Sbjct: 669 PEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYY---DLDDFDNNKEVKS 717
Score = 629 (226.5 bits), Expect = 4.4e-95, Sum P(2) = 4.4e-95
Identities = 143/289 (49%), Positives = 189/289 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE +++ L+ YS +I+DEAHERTL TDIL GL+K + R DLK+++ SATL
Sbjct: 173 MTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATL 232
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF ++F DAP+ +PGR +PV+IYYT+ PE DY++A + ++LQIH + GDILVFL
Sbjct: 233 DAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFL 292
Query: 121 TGQEEIE-TCNEI-LQ-DRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA----- 172
TG+EEIE C +I L+ D + R G+ L + P+Y +LP + Q +IF PTP +
Sbjct: 293 TGEEEIEDACRKITLEADDLVREGAA-GPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYG 351
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
RKVV++TNIAETSLTID I+YV+DPGF KQ +N R +ESL V PISKASA QRAG
Sbjct: 352 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 411
Query: 233 GFNPLSDFRGCAHVLGEEVLRG-CAHVLGEEVLRPEVSQPFRSFGYLGV 280
P FR + EE R E+LR +S LG+
Sbjct: 412 RTRPGKCFR----LYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGI 456
Score = 356 (130.4 bits), Expect = 4.4e-95, Sum P(2) = 4.4e-95
Identities = 70/163 (42%), Positives = 106/163 (65%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDHL LLN+Y+ + + + WC+ +F+ HR++ A +VR+QL ++R E+EL+S P +
Sbjct: 559 GDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFD 618
Query: 1212 T----VNIRKAITAGYFYHIAKLSKSG-SYKTAKHNQTVMIHPNSSLFEELPRWVLYHEL 1266
VNIR+A+ +G+F +AK S +G +Y T K NQ V +HP+ L P WV+Y+E
Sbjct: 619 DKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-SVTPEWVVYNEF 677
Query: 1267 VFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKT 1309
V TTK F+R VT I +WL+E+AP+YY +L+D N K K+
Sbjct: 678 VLTTKSFIRNVTAIRPEWLIELAPNYY---DLDDFDNNKEVKS 717
Score = 304 (112.1 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 60/140 (42%), Positives = 87/140 (62%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY-LHEAGFTKDKMKIGC 720
I ET++ LP+Y +++ + ++Q+++ GETGSGKTTQIPQ+ L++ +I C
Sbjct: 68 ILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIAC 127
Query: 721 TQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQP +EM V LG EVGY IRFEDC+ T++KYMTDG L RE +++
Sbjct: 128 TQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHM 187
Query: 781 LASYSVMIIDEAHPKVYVID 800
L+ YS +I+DEAH + D
Sbjct: 188 LSRYSCIILDEAHERTLATD 207
Score = 39 (18.8 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 1070 KTAKHNQTVMI--HPNSSLFEELPRWVLYHELVFTT 1103
K NQ ++ S ++P++VLY EL T
Sbjct: 86 KIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLT 121
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 783 (280.7 bits), Expect = 1.6e-107, Sum P(2) = 1.6e-107
Identities = 160/357 (44%), Positives = 227/357 (63%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
VYV+DPGF KQ +N+R +ESL V PIS+ASA Q KCFRLYT A+K E
Sbjct: 405 VYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKKE 464
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L + T PEI R NL N +L LK LG++DL+HFDF+DPP ET++ ALE+L L LN G
Sbjct: 465 LIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMMRALEELNYLSCLNDDG 524
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
DLT LG +E+PLDP + ML++S ++ C E++++ S+LSV +F RP + AD
Sbjct: 525 DLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVP-QVFMRPANNRKRADE 583
Query: 976 ARKNFFMLGGDHLVLLNIYN----QWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
+++F + GDHL LLN Y+ + A +WC+E+F+ +R + A +VR QL G++
Sbjct: 584 MKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRAQLKGIM 643
Query: 1032 QRVEMELVSNP-TET---VNIRKAITAGYFYHIAKLSKSGS-YKTAKHNQTVMIHPNSSL 1086
+R ++ELVS P T+ NIR+ + AG+F +A SG Y T K NQ VM+HP+S L
Sbjct: 644 ERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRETSGKVYHTIKDNQNVMLHPSSVL 703
Query: 1087 FEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTL 1143
+ WVLYHE V T+K+++R VT I +WL+++AP+YY ED K+ K++
Sbjct: 704 TTDY-EWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYYDLDNFEDDQAKRALKSV 759
Score = 605 (218.0 bits), Expect = 3.3e-91, Sum P(2) = 3.3e-91
Identities = 139/290 (47%), Positives = 181/290 (62%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE + +P++ YS +IIDEAHERTL TDIL L+K + RSDLK++I SATL
Sbjct: 205 MTDGQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATL 264
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KF +F +AP+ +PGR PV+I+YT E DYI+A V ++LQIHAT+ GDIL+FL
Sbjct: 265 DAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLFL 324
Query: 121 TGQEEIE-TCNEI-LQ-DRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN------ 171
TG+EEIE C ++ L+ D + R + + + P+Y LP Q KIF PP
Sbjct: 325 TGEEEIEDVCRKVRLEVDELIR-DADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGR 383
Query: 172 -ARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGV 230
RK ++ATNIAETSLTID I+YV+DPGF KQ +N+R +ESL V PIS+ASA QRAG
Sbjct: 384 PGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGR 443
Query: 231 ITGFNPLSDFRGCAHVLGEEVLRGCAHVLGEEVLRPEVSQPFRSFGYLGV 280
P FR ++ L + E+LR +S LGV
Sbjct: 444 AGRTRPGKCFRLYTEAAFKKELIEQTY---PEILRSNLSNTILELKKLGV 490
Score = 344 (126.2 bits), Expect = 3.3e-91, Sum P(2) = 3.3e-91
Identities = 72/189 (38%), Positives = 112/189 (59%)
Query: 1131 LEDSTNKKMPKTLGKSRAELGGDHLVLLNIYN----QWADADFSTQWCYENFIQHRSMKR 1186
+ + N+K + + + GDHL LLN Y+ + A +WC+E+F+ +R +
Sbjct: 572 MRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSS 631
Query: 1187 ARDVREQLIGLVQRVEMELVSNP-TET---VNIRKAITAGYFYHIAKLSKSGS-YKTAKH 1241
A +VR QL G+++R ++ELVS P T+ NIR+ + AG+F +A SG Y T K
Sbjct: 632 ADNVRAQLKGIMERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRETSGKVYHTIKD 691
Query: 1242 NQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDS 1301
NQ VM+HP+S L + WVLYHE V T+K+++R VT I +WL+++AP+YY ED
Sbjct: 692 NQNVMLHPSSVLTTDY-EWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYYDLDNFEDD 750
Query: 1302 TNKKMPKTL 1310
K+ K++
Sbjct: 751 QAKRALKSV 759
Score = 313 (115.2 bits), Expect = 1.6e-107, Sum P(2) = 1.6e-107
Identities = 61/140 (43%), Positives = 90/140 (64%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY-LHEAGFTKDKMKIGC 720
I +T+++LP++ +Q+ +D Q+++ GETGSGKTTQIPQY L++ +K + C
Sbjct: 100 ILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVAC 159
Query: 721 TQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQP +E+ V+LG EVGY+IRFE+ T+ TI+KYMTDG L RE + +P+
Sbjct: 160 TQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDPN 219
Query: 781 LASYSVMIIDEAHPKVYVID 800
+ YS +IIDEAH + D
Sbjct: 220 MTRYSCIIIDEAHERTLATD 239
Score = 42 (19.8 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 1074 HNQTVMI---HPNSSLFEELPRWVLYHELVFTTKEFM 1107
H +M+ S ++P++VLY EL K+ +
Sbjct: 121 HKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMV 157
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 672 (241.6 bits), Expect = 3.5e-106, Sum P(3) = 3.5e-106
Identities = 143/372 (38%), Positives = 224/372 (60%)
Query: 767 TDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKA 826
T+ + R+ + ++ S+ I D VYVID G CKQ +N +G+ESL +P SKA
Sbjct: 797 TNNKIRRKIILSTNICETSITI-DNI---VYVIDSGLCKQKIYNPNSGIESLVTLPCSKA 852
Query: 827 SANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIH 886
S NQ KCFRL+T ++ +L DN++PEIQR + + +L+LK+LG++D+I+
Sbjct: 853 SVNQRTGRAGRKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIIN 911
Query: 887 FDFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLL-ASEKYKC 945
FDFLDPP ++ LE LY+LGALN G+LT+ GR+MAEFP D KM+L A+EKY C
Sbjct: 912 FDFLDPPSPIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNC 971
Query: 946 VEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGG-DHLVLLNIYNQWADADFST 1004
V+EI+ +ASML+ IFY K K A+ +K F + GG D L+ LNIY Q + +FST
Sbjct: 972 VDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFST 1031
Query: 1005 QWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL----VSNPTETVNIRKAITAGYFYHI 1060
+CY++F+Q+ ++ + +DV+ QL+ + +++++ + + N NI+K+I + +F +
Sbjct: 1032 SFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNA 1091
Query: 1061 AKLSKSGSYKTAKHNQTVMIHPNSSLF-----EELPR-WVLYHELVFTTKEFMRQVTEIE 1114
A K K NQ V I+PNS LF EE ++++E++ K ++R +
Sbjct: 1092 ALPVNKTELKIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVN 1151
Query: 1115 SKWLLEVAPHYY 1126
L ++A Y+
Sbjct: 1152 KNLLFQIADFYF 1163
Score = 462 (167.7 bits), Expect = 3.5e-106, Sum P(3) = 3.5e-106
Identities = 89/165 (53%), Positives = 120/165 (72%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG R L P L SV+IIDEAHER LHTD++ +VKDI FR +++++ISSATL
Sbjct: 534 MTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATL 593
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+K S +F+ AP+F +PGR++ VDIYYT E++YI A V++ILQIH TQ GDILVFL
Sbjct: 594 DAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFL 653
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIF 165
GQ EIE + L++++ L K + L+ILP+YS+LP + Q +IF
Sbjct: 654 PGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
Score = 325 (119.5 bits), Expect = 3.8e-91, Sum P(3) = 3.8e-91
Identities = 76/190 (40%), Positives = 110/190 (57%)
Query: 618 DREHQEQYELLLDNQIDFIQALSLPGNRDKGEE--EMTE-----KQKKKLNIEETKKSLP 670
+++ E E L + ++F+ S G +K +E ++ E K+KK I + +K LP
Sbjct: 380 EKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKKMKKIIDERKRLP 439
Query: 671 IYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXX 730
IY ++ D++ A++++++LI+ GETGSGK+TQ+ QYL+E + I CTQP
Sbjct: 440 IYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYG-NIICTQPRRIACIA 498
Query: 731 XXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIID 790
EEM VK+G EVGY IRF++ TSE T I YMTDG R L P L SV+IID
Sbjct: 499 IANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLIID 558
Query: 791 EAHPKVYVID 800
EAH + D
Sbjct: 559 EAHERALHTD 568
Score = 222 (83.2 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 62/219 (28%), Positives = 109/219 (49%)
Query: 1089 ELPRWVLYHELVFTTKEFMRQVTEI--ESKWLLEVAPHYY--KPRELEDSTNKKMPKTLG 1144
E P V +++ + E V EI + L +Y K +E E KKM G
Sbjct: 951 EFPTDVKSSKMILSAAEKYNCVDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFIIEG 1010
Query: 1145 KSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GGD L+ LNIY Q + +FST +CY++F+Q+ ++ + +DV+ QL+ + +++++
Sbjct: 1011 ------GGDFLLFLNIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIP 1064
Query: 1205 L----VSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-----E 1255
+ + N NI+K+I + +F + A K K NQ V I+PNS LF E
Sbjct: 1065 ITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELKIIKLNQVVSIYPNSVLFKKNIME 1124
Query: 1256 ELPR-WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
E ++++E++ K ++R + L ++A Y+
Sbjct: 1125 ENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADFYF 1163
Score = 197 (74.4 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK++L+TNI ETS+TIDNI+YVID G CKQ +N +G+ESL +P SKAS NQR G
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTG 859
Score = 107 (42.7 bits), Expect = 1.0e-68, Sum P(2) = 1.0e-68
Identities = 46/223 (20%), Positives = 91/223 (40%)
Query: 454 ERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRRKYL 513
+ DE +++K + N + + + ++ I L+ ++RRKYL
Sbjct: 16 DNDESKKKIKTDGEENDIMESKGKDSYSLYLEYQKGRNKKLKNNEEYIEYLKKDARRKYL 75
Query: 514 EKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKVQRY 573
++R+++K+ ++ +LDDE L+S +L AKE+ RE + + Y
Sbjct: 76 KEREKEKL-DITKKLLDDELLYSTVKLEGKDLKELQFSKKIYNIAKENINLREKLQEESY 134
Query: 574 YMPKGT-KGPXXXXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGA----KDREHQEQYELL 628
Y + K Y ++++ ++ I + G+ ++ + Q E +
Sbjct: 135 YFQQDIDKNKKTQTYENDKVDKSLYN---YDEQILNKGILKFGSAISKQNIQKQNNNEFV 191
Query: 629 LDNQIDFIQALSLPGN---RDKGEEEMTEKQKK-KLNIEETKK 667
D+ I S+ K E T+K+KK K +IE K
Sbjct: 192 FDDDIITTNRKSIKRESFEEKKMNESPTKKKKKRKDDIESDNK 234
Score = 46 (21.3 bits), Expect = 3.5e-106, Sum P(3) = 3.5e-106
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 450 DDRKERDEFSERLKNRDKNNTKNVATS 476
+D+ ++E +E KN DKN+ NV +
Sbjct: 747 NDKNYKNEKNE--KNNDKNDKNNVGNN 771
Score = 46 (21.3 bits), Expect = 3.5e-106, Sum P(3) = 3.5e-106
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D ++D +E +++ + DKN+ KN + +K
Sbjct: 726 DDENDENGENEKNDKNEKNDKND-KNYKNEKNEK 758
Score = 43 (20.2 bits), Expect = 7.3e-106, Sum P(3) = 7.3e-106
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 447 DSDDDRKERDEFSERLKNR--DKNNTKN 472
+ +D ++ D+ + KN +KNN KN
Sbjct: 736 EKNDKNEKNDKNDKNYKNEKNEKNNDKN 763
Score = 40 (19.1 bits), Expect = 3.8e-91, Sum P(3) = 3.8e-91
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 497 RDKIIPKLRIESRRKYLEKRKEDKVAELEADILDDEY 533
R+ K ES K +KRK+D ++ + D D++Y
Sbjct: 206 RESFEEKKMNESPTKKKKKRKDDIESDNKCD-KDEKY 241
Score = 39 (18.8 bits), Expect = 8.2e-54, Sum P(3) = 8.2e-54
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 305 DQTL-VTFMLTHLPTTYIKRKSSEYKVGNGEDSFCV 339
D+ L V MLTH + +K E + N + F +
Sbjct: 973 DEILNVASMLTHANNIFYVQKGKEKEAENIKKMFII 1008
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 672 (241.6 bits), Expect = 3.5e-106, Sum P(3) = 3.5e-106
Identities = 143/372 (38%), Positives = 224/372 (60%)
Query: 767 TDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKA 826
T+ + R+ + ++ S+ I D VYVID G CKQ +N +G+ESL +P SKA
Sbjct: 797 TNNKIRRKIILSTNICETSITI-DNI---VYVIDSGLCKQKIYNPNSGIESLVTLPCSKA 852
Query: 827 SANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIH 886
S NQ KCFRL+T ++ +L DN++PEIQR + + +L+LK+LG++D+I+
Sbjct: 853 SVNQRTGRAGRKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIIN 911
Query: 887 FDFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLL-ASEKYKC 945
FDFLDPP ++ LE LY+LGALN G+LT+ GR+MAEFP D KM+L A+EKY C
Sbjct: 912 FDFLDPPSPIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNC 971
Query: 946 VEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGG-DHLVLLNIYNQWADADFST 1004
V+EI+ +ASML+ IFY K K A+ +K F + GG D L+ LNIY Q + +FST
Sbjct: 972 VDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFST 1031
Query: 1005 QWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL----VSNPTETVNIRKAITAGYFYHI 1060
+CY++F+Q+ ++ + +DV+ QL+ + +++++ + + N NI+K+I + +F +
Sbjct: 1032 SFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNA 1091
Query: 1061 AKLSKSGSYKTAKHNQTVMIHPNSSLF-----EELPR-WVLYHELVFTTKEFMRQVTEIE 1114
A K K NQ V I+PNS LF EE ++++E++ K ++R +
Sbjct: 1092 ALPVNKTELKIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVN 1151
Query: 1115 SKWLLEVAPHYY 1126
L ++A Y+
Sbjct: 1152 KNLLFQIADFYF 1163
Score = 462 (167.7 bits), Expect = 3.5e-106, Sum P(3) = 3.5e-106
Identities = 89/165 (53%), Positives = 120/165 (72%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG R L P L SV+IIDEAHER LHTD++ +VKDI FR +++++ISSATL
Sbjct: 534 MTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATL 593
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+K S +F+ AP+F +PGR++ VDIYYT E++YI A V++ILQIH TQ GDILVFL
Sbjct: 594 DAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFL 653
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIF 165
GQ EIE + L++++ L K + L+ILP+YS+LP + Q +IF
Sbjct: 654 PGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
Score = 325 (119.5 bits), Expect = 3.8e-91, Sum P(3) = 3.8e-91
Identities = 76/190 (40%), Positives = 110/190 (57%)
Query: 618 DREHQEQYELLLDNQIDFIQALSLPGNRDKGEE--EMTE-----KQKKKLNIEETKKSLP 670
+++ E E L + ++F+ S G +K +E ++ E K+KK I + +K LP
Sbjct: 380 EKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKKMKKIIDERKRLP 439
Query: 671 IYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXX 730
IY ++ D++ A++++++LI+ GETGSGK+TQ+ QYL+E + I CTQP
Sbjct: 440 IYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYG-NIICTQPRRIACIA 498
Query: 731 XXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIID 790
EEM VK+G EVGY IRF++ TSE T I YMTDG R L P L SV+IID
Sbjct: 499 IANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLIID 558
Query: 791 EAHPKVYVID 800
EAH + D
Sbjct: 559 EAHERALHTD 568
Score = 222 (83.2 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 62/219 (28%), Positives = 109/219 (49%)
Query: 1089 ELPRWVLYHELVFTTKEFMRQVTEI--ESKWLLEVAPHYY--KPRELEDSTNKKMPKTLG 1144
E P V +++ + E V EI + L +Y K +E E KKM G
Sbjct: 951 EFPTDVKSSKMILSAAEKYNCVDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFIIEG 1010
Query: 1145 KSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GGD L+ LNIY Q + +FST +CY++F+Q+ ++ + +DV+ QL+ + +++++
Sbjct: 1011 ------GGDFLLFLNIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIP 1064
Query: 1205 L----VSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF-----E 1255
+ + N NI+K+I + +F + A K K NQ V I+PNS LF E
Sbjct: 1065 ITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELKIIKLNQVVSIYPNSVLFKKNIME 1124
Query: 1256 ELPR-WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
E ++++E++ K ++R + L ++A Y+
Sbjct: 1125 ENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADFYF 1163
Score = 197 (74.4 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK++L+TNI ETS+TIDNI+YVID G CKQ +N +G+ESL +P SKAS NQR G
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTG 859
Score = 107 (42.7 bits), Expect = 1.0e-68, Sum P(2) = 1.0e-68
Identities = 46/223 (20%), Positives = 91/223 (40%)
Query: 454 ERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRRKYL 513
+ DE +++K + N + + + ++ I L+ ++RRKYL
Sbjct: 16 DNDESKKKIKTDGEENDIMESKGKDSYSLYLEYQKGRNKKLKNNEEYIEYLKKDARRKYL 75
Query: 514 EKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKVQRY 573
++R+++K+ ++ +LDDE L+S +L AKE+ RE + + Y
Sbjct: 76 KEREKEKL-DITKKLLDDELLYSTVKLEGKDLKELQFSKKIYNIAKENINLREKLQEESY 134
Query: 574 YMPKGT-KGPXXXXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGA----KDREHQEQYELL 628
Y + K Y ++++ ++ I + G+ ++ + Q E +
Sbjct: 135 YFQQDIDKNKKTQTYENDKVDKSLYN---YDEQILNKGILKFGSAISKQNIQKQNNNEFV 191
Query: 629 LDNQIDFIQALSLPGN---RDKGEEEMTEKQKK-KLNIEETKK 667
D+ I S+ K E T+K+KK K +IE K
Sbjct: 192 FDDDIITTNRKSIKRESFEEKKMNESPTKKKKKRKDDIESDNK 234
Score = 46 (21.3 bits), Expect = 3.5e-106, Sum P(3) = 3.5e-106
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 450 DDRKERDEFSERLKNRDKNNTKNVATS 476
+D+ ++E +E KN DKN+ NV +
Sbjct: 747 NDKNYKNEKNE--KNNDKNDKNNVGNN 771
Score = 46 (21.3 bits), Expect = 3.5e-106, Sum P(3) = 3.5e-106
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDK 480
D ++D +E +++ + DKN+ KN + +K
Sbjct: 726 DDENDENGENEKNDKNEKNDKND-KNYKNEKNEK 758
Score = 43 (20.2 bits), Expect = 7.3e-106, Sum P(3) = 7.3e-106
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 447 DSDDDRKERDEFSERLKNR--DKNNTKN 472
+ +D ++ D+ + KN +KNN KN
Sbjct: 736 EKNDKNEKNDKNDKNYKNEKNEKNNDKN 763
Score = 40 (19.1 bits), Expect = 3.8e-91, Sum P(3) = 3.8e-91
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 497 RDKIIPKLRIESRRKYLEKRKEDKVAELEADILDDEY 533
R+ K ES K +KRK+D ++ + D D++Y
Sbjct: 206 RESFEEKKMNESPTKKKKKRKDDIESDNKCD-KDEKY 241
Score = 39 (18.8 bits), Expect = 8.2e-54, Sum P(3) = 8.2e-54
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 305 DQTL-VTFMLTHLPTTYIKRKSSEYKVGNGEDSFCV 339
D+ L V MLTH + +K E + N + F +
Sbjct: 973 DEILNVASMLTHANNIFYVQKGKEKEAENIKKMFII 1008
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 541 (195.5 bits), Expect = 2.5e-98, Sum P(2) = 2.5e-98
Identities = 129/330 (39%), Positives = 188/330 (56%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
VID GF K+ +FN+ G++ L V ISKA A Q C+R YT A
Sbjct: 362 VIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTK-AEMDSFA 420
Query: 858 DNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD- 916
D T PEI R N + VL L AL I D +FDFLDPP + L A + L ALGA+ D
Sbjct: 421 DATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDS 479
Query: 917 -LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T LGR+M ++PLDP K+LL + + C+EEI+++ S+LS + +F +K A
Sbjct: 480 YITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLS-SDHVFVSNSEKNEMAAL 538
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
A F GDHL LLN++N + ++ WC++N++ RS+ AR+VR QL + + +
Sbjct: 539 AHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLH 598
Query: 1036 MELVSNPTETVN-IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEEL-PRW 1093
+ L N ++ + ++K I G+F +IA L + G Y TA N IHP+S L + P +
Sbjct: 599 LAL--NSSDDIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKPSY 656
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
+L+ E+V T + F+RQVTEI +W+ EV P
Sbjct: 657 ILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
Score = 477 (173.0 bits), Expect = 2.5e-98, Sum P(2) = 2.5e-98
Identities = 103/235 (43%), Positives = 152/235 (64%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFR-----SDLKLLI 55
+TDG L RE + + L YSV+I+DEAHERT++ D+LFG+VKD + R ++LK+++
Sbjct: 164 LTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVV 223
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG- 114
+SAT+D F +F+ ++ + GR +PV + +TK DYI +V++ IH T P
Sbjct: 224 TSATMDIDHFGNYFNCKGMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNH 282
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
D+L+FLTGQEEIE+ + ++ + + +L + +Y+ L Q + F+PTP N RK
Sbjct: 283 DVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRK 342
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
V+LATNIAETS+TI I VID GF K+ +FN+ G++ L V ISKA A QRAG
Sbjct: 343 VILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAG 397
Score = 286 (105.7 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 59/143 (41%), Positives = 87/143 (60%)
Query: 658 KKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK 717
K+ +IE+ +KSLP++ + ++ + + ++I ETGSGKTTQIPQ+L AG+ K+ M
Sbjct: 57 KRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGM- 115
Query: 718 IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS 777
IG TQP +E+ +G VGY +RFED TS T I+++TDG L RE +
Sbjct: 116 IGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIK 175
Query: 778 EPDLASYSVMIIDEAHPKVYVID 800
+ L YSV+I+DEAH + D
Sbjct: 176 DRLLLKYSVIILDEAHERTVNAD 198
Score = 262 (97.3 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 71/232 (30%), Positives = 118/232 (50%)
Query: 1063 LSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEF--MRQVTEIESKWLLE 1120
L G+ KT + I P + P Y +L+ T F M ++ + S +L
Sbjct: 467 LDALGAIKTGDDSY---ITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVS--VLS 521
Query: 1121 VAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQ 1180
+ H + + +S +M GDHL LLN++N + ++ WC++N++
Sbjct: 522 -SDHVF----VSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLN 576
Query: 1181 HRSMKRARDVREQLIGLVQRVEMELVSNPTETVN-IRKAITAGYFYHIAKLSKSGSYKTA 1239
RS+ AR+VR QL + + + + L N ++ + ++K I G+F +IA L + G Y TA
Sbjct: 577 LRSLTYARNVRRQLREISEHLHLAL--NSSDDIEMLKKCILNGFFENIAVLQRDGFYITA 634
Query: 1240 KHNQTVMIHPNSSLFEEL-PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1290
N IHP+S L + P ++L+ E+V T + F+RQVTEI +W+ EV P
Sbjct: 635 SGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
Score = 40 (19.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 88 YTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVR 138
YTKA + DA IL+ + T + +L + + L+D +R
Sbjct: 411 YTKAEMDSFADATQPEILRTNPTSMVLQLLALDIDCNNFDFLDPPLEDGLR 461
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 589 (212.4 bits), Expect = 4.7e-96, Sum P(3) = 4.7e-96
Identities = 110/201 (54%), Positives = 150/201 (74%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL +YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 634 MTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATM 693
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDILVF+
Sbjct: 694 DADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFM 753
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE +E + + + L K L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 754 PGQEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 812
Query: 181 IAETSLTIDNIIYVIDPGFCK 201
IAETSLT+D I++VID G+CK
Sbjct: 813 IAETSLTVDGIMFVIDSGYCK 833
Score = 463 (168.0 bits), Expect = 4.7e-96, Sum P(3) = 4.7e-96
Identities = 103/245 (42%), Positives = 143/245 (58%)
Query: 884 LIHFDFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKY 943
LI F +P H L AL ++ G G LT GR+M EFPLDP + KML+ S
Sbjct: 851 LIEFYGSEPAFH-WLQSALLLPFS-GGFIPPGGLTSTGRQMVEFPLDPALSKMLIVSCDM 908
Query: 944 KCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFS 1003
C EI+ I SMLSV AIFYRPK + +D R+ F + DHL LN+Y QW + ++S
Sbjct: 909 GCSSEILLIVSMLSVP-AIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYS 967
Query: 1004 TQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKL 1063
T WC ++FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL
Sbjct: 968 TLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKL 1027
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEV 1121
G Y + +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+
Sbjct: 1028 KGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1087
Query: 1122 APHYY 1126
P +Y
Sbjct: 1088 GPMFY 1092
Score = 416 (151.5 bits), Expect = 3.8e-76, Sum P(5) = 3.8e-76
Identities = 88/182 (48%), Positives = 118/182 (64%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
+G K E +++ + D ++D+ + + E +E KKK +I E ++ LPI+
Sbjct: 485 MGIKKEEEKDEM-VTEDGKVDYRTEQKFAEHMKEKSEARSEFAKKK-SILEQRQYLPIFA 542
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
+Q+L+ +RD+ ++I+ GETGSGKTTQ+ QYLHE G+T D IGCTQP
Sbjct: 543 VQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPRRVAAMSVAK 601
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEMGV+LG EVGYAIRFEDCTSE TIIKYMTDG L RE L E DL +YS +I+DEAH
Sbjct: 602 RVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAH 661
Query: 794 PK 795
+
Sbjct: 662 ER 663
Score = 320 (117.7 bits), Expect = 4.9e-81, Sum P(3) = 4.9e-81
Identities = 66/178 (37%), Positives = 103/178 (57%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 920 MLSVPAIFYRPKGREEESDQVREKF-----AVPESDHLTYLNVYLQWKNNNYSTLWCNQH 974
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 975 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYV 1034
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1035 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1092
Score = 49 (22.3 bits), Expect = 3.6e-33, Sum P(4) = 3.6e-33
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q + +H + + + L ++ T+++ + + E+E L V P Y +
Sbjct: 729 YVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQL 788
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 789 PSDLQAKIFQKAPDGVRK 806
Score = 49 (22.3 bits), Expect = 3.6e-33, Sum P(4) = 3.6e-33
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q + +H + + + L ++ T+++ + + E+E L V P Y +
Sbjct: 729 YVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQL 788
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 789 PSDLQAKIFQKAPDGVRK 806
Score = 44 (20.5 bits), Expect = 4.0e-52, Sum P(3) = 4.0e-52
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 918 VSMLSVPAIFYRPKGREEESDQVREKFAVPES 949
Score = 43 (20.2 bits), Expect = 3.8e-76, Sum P(5) = 3.8e-76
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 417 TDRRTQSPCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERDEFSERLKNRDK 467
+ RR+Q PS TP R D DR++RD S R + DK
Sbjct: 226 SSRRSQWESPS-----PTPSYRDSERSHRASRDIDRRDRDR-SVRSRYSDK 270
Score = 40 (19.1 bits), Expect = 4.7e-96, Sum P(3) = 4.7e-96
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 796 VYVIDPGFCK 805
++VID G+CK
Sbjct: 824 MFVIDSGYCK 833
Score = 40 (19.1 bits), Expect = 4.0e-52, Sum P(3) = 4.0e-52
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 910 ALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEE 948
++ H G + RR A+ M +M LA E+ + E
Sbjct: 1093 SIKHAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRE 1131
Score = 39 (18.8 bits), Expect = 3.8e-76, Sum P(5) = 3.8e-76
Identities = 6/26 (23%), Positives = 16/26 (61%)
Query: 506 IESRRKYLEKRKEDKVAELEADILDD 531
++ R ++L K+K+ +++ I +D
Sbjct: 354 VKKREQHLHKQKQKRISAQRRQINED 379
Score = 39 (18.8 bits), Expect = 9.9e-76, Sum P(5) = 9.9e-76
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 420 RTQSPCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERDE 457
R +S P VFK P RA + + R+ER+E
Sbjct: 30 RARSAVPE-QHVFKAPAPRASLLGLDVLAAQKRREREE 66
Score = 37 (18.1 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 5/9 (55%), Positives = 9/9 (100%)
Query: 598 EQRKWEDEQ 606
E+++WED+Q
Sbjct: 317 ERQQWEDDQ 325
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 589 (212.4 bits), Expect = 1.5e-95, Sum P(3) = 1.5e-95
Identities = 110/201 (54%), Positives = 150/201 (74%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL +YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 631 MTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATM 690
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDILVF+
Sbjct: 691 DADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFM 750
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE +E + + + L K L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 751 PGQEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 809
Query: 181 IAETSLTIDNIIYVIDPGFCK 201
IAETSLT+D I++VID G+CK
Sbjct: 810 IAETSLTVDGIMFVIDSGYCK 830
Score = 458 (166.3 bits), Expect = 1.5e-95, Sum P(3) = 1.5e-95
Identities = 95/217 (43%), Positives = 132/217 (60%)
Query: 912 NHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
N G LT GR+M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK +
Sbjct: 872 NPRG-LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREE 929
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
+D R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++
Sbjct: 930 ESDQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIM 989
Query: 1032 QRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE-- 1089
+ M L S T+ +RK I A YF+ AKL G Y + +HP SSLF
Sbjct: 990 VQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGY 1049
Query: 1090 LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1050 TPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1086
Score = 416 (151.5 bits), Expect = 1.3e-75, Sum P(5) = 1.3e-75
Identities = 88/182 (48%), Positives = 118/182 (64%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
+G K E +++ + D ++D+ + + E +E KKK +I E ++ LPI+
Sbjct: 482 MGIKKEEEKDEM-VTEDGKVDYRTEQKFAEHMKEKSEARSEFAKKK-SILEQRQYLPIFA 539
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
+Q+L+ +RD+ ++I+ GETGSGKTTQ+ QYLHE G+T D IGCTQP
Sbjct: 540 VQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPRRVAAMSVAK 598
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEMGV+LG EVGYAIRFEDCTSE TIIKYMTDG L RE L E DL +YS +I+DEAH
Sbjct: 599 RVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAH 658
Query: 794 PK 795
+
Sbjct: 659 ER 660
Score = 320 (117.7 bits), Expect = 4.7e-81, Sum P(3) = 4.7e-81
Identities = 66/178 (37%), Positives = 103/178 (57%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 914 MLSVPAIFYRPKGREEESDQVREKF-----AVPESDHLTYLNVYLQWKNNNYSTLWCNQH 968
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 969 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYV 1028
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 1029 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1086
Score = 49 (22.3 bits), Expect = 3.5e-33, Sum P(4) = 3.5e-33
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q + +H + + + L ++ T+++ + + E+E L V P Y +
Sbjct: 726 YVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQL 785
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 786 PSDLQAKIFQKAPDGVRK 803
Score = 49 (22.3 bits), Expect = 3.5e-33, Sum P(4) = 3.5e-33
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q + +H + + + L ++ T+++ + + E+E L V P Y +
Sbjct: 726 YVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQL 785
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 786 PSDLQAKIFQKAPDGVRK 803
Score = 44 (20.5 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 912 VSMLSVPAIFYRPKGREEESDQVREKFAVPES 943
Score = 43 (20.2 bits), Expect = 1.3e-75, Sum P(5) = 1.3e-75
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 417 TDRRTQSPCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERDEFSERLKNRDK 467
+ RR+Q PS TP R D DR++RD S R + DK
Sbjct: 223 SSRRSQWESPS-----PTPSYRDSERSHRASRDIDRRDRDR-SVRSRYSDK 267
Score = 40 (19.1 bits), Expect = 1.5e-95, Sum P(3) = 1.5e-95
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 796 VYVIDPGFCK 805
++VID G+CK
Sbjct: 821 MFVIDSGYCK 830
Score = 40 (19.1 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 910 ALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEE 948
++ H G + RR A+ M +M LA E+ + E
Sbjct: 1087 SIKHAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRE 1125
Score = 39 (18.8 bits), Expect = 1.3e-75, Sum P(5) = 1.3e-75
Identities = 6/26 (23%), Positives = 16/26 (61%)
Query: 506 IESRRKYLEKRKEDKVAELEADILDD 531
++ R ++L K+K+ +++ I +D
Sbjct: 351 VKKREQHLHKQKQKRISAQRRQINED 376
Score = 39 (18.8 bits), Expect = 3.5e-75, Sum P(5) = 3.5e-75
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 420 RTQSPCPSCLKVFKTPKVRAFMGHFLTDSDDDRKERDE 457
R +S P VFK P RA + + R+ER+E
Sbjct: 27 RARSAVPE-QHVFKAPAPRASLLGLDVLAAQKRREREE 63
Score = 37 (18.1 bits), Expect = 2.2e-75, Sum P(5) = 2.2e-75
Identities = 5/9 (55%), Positives = 9/9 (100%)
Query: 598 EQRKWEDEQ 606
E+++WED+Q
Sbjct: 314 ERQQWEDDQ 322
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 658 (236.7 bits), Expect = 4.5e-95, Sum P(2) = 4.5e-95
Identities = 146/361 (40%), Positives = 214/361 (59%)
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQX 831
HR+ + ++A SV I YVID G K FNS+ G+ESLTV PIS+++A Q
Sbjct: 363 HRKVVLSTNIAETSVTISGIR----YVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQR 418
Query: 832 XXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLD 891
+C+R+YT + +L T+PEI+RI+L AVL LKA G ND+I+F ++D
Sbjct: 419 SGRAGREAAGQCYRIYTEADFD-KLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMD 477
Query: 892 PPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVT 951
PP E L+ ALE LY++GAL+ +G + LG +M+ PL P + + +LA+ ++ C+ E++
Sbjct: 478 PPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVID 537
Query: 952 IASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADA--DFSTQWCYE 1009
+ S LS + ++F P++K A AR F GD L LN Q+ ++ D QWC +
Sbjct: 538 VVSCLSTD-SMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQ 596
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNP-TETVNIRKAITAGYFYHIAKLSKSGS 1068
NFI R++K D+R+QL + EL S+P + N+ + +GY + A L GS
Sbjct: 597 NFINRRALKTILDIRKQLREHCLKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDGS 656
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1128
Y+T NQT+ IHP+SSLF + ++YHELVFTTK ++R V+ I S WL VAPHY
Sbjct: 657 YRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLAR 716
Query: 1129 R 1129
R
Sbjct: 717 R 717
Score = 617 (222.3 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 119/229 (51%), Positives = 167/229 (72%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +++P L+ Y +I+DEAHERTL TD+L G VK I++ R L+++I SATL
Sbjct: 192 LTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATL 251
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+A++FSEFFD A + I GR++PV I+YT PE DY+DAC+ +I Q+H P GDILVFL
Sbjct: 252 NAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFL 311
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
TGQ+EIE +++ ++L S + ++ P++++LP + Q ++FLP N RKVVL+TN
Sbjct: 312 TGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTN 371
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
IAETS+TI I YVID G K FNS+ G+ESLTV PIS+++A QR+G
Sbjct: 372 IAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSG 420
Score = 326 (119.8 bits), Expect = 4.5e-95, Sum P(2) = 4.5e-95
Identities = 69/181 (38%), Positives = 110/181 (60%)
Query: 629 LDNQIDFIQALSLPGNRDKGEEEMTEKQ-KKKLNIEETKKSLPIYPFKQDLIDAVRDHQV 687
L+ DF A + G+ + E+ +E K+ +I E +K+LPI+ L ++D++V
Sbjct: 56 LEQDTDF-GANEVVGSDNSSPEKRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRV 114
Query: 688 LIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEV 747
+++ GETGSGK+TQIPQ+L+E + ++ + TQP E G +LG +V
Sbjct: 115 IVVVGETGSGKSTQIPQFLNECPYAQEGC-VAITQPRRVAAVNLAKRVAAEQGCRLGEQV 173
Query: 748 GYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDP--GFCK 805
GY+IRF+D TS++T IKY+TDG L RE +++P L+ Y +I+DEAH + + D GF K
Sbjct: 174 GYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVK 233
Query: 806 Q 806
+
Sbjct: 234 K 234
Score = 289 (106.8 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 63/148 (42%), Positives = 87/148 (58%)
Query: 1152 GDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP 1209
GD L LN Q+ ++ D QWC +NFI R++K D+R+QL + EL S+P
Sbjct: 570 GDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNSSP 629
Query: 1210 -TETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVF 1268
+ N+ + +GY + A L GSY+T NQT+ IHP+SSLF + ++YHELVF
Sbjct: 630 EVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVF 689
Query: 1269 TTKEFMRQVTEIESKWLLEVAPHYYKPR 1296
TTK ++R V+ I S WL VAPHY R
Sbjct: 690 TTKSYVRGVSSIRSNWLNAVAPHYLARR 717
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 612 (220.5 bits), Expect = 6.5e-91, Sum P(2) = 6.5e-91
Identities = 137/394 (34%), Positives = 224/394 (56%)
Query: 753 FEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKV-YVIDPGFCKQNNFNS 811
F SE+ + + T R+ + ++A S+ I P + YVIDPGF K +++
Sbjct: 331 FSALPSEQQMKVFAPAPTGFRKVILATNIAETSITI-----PGIRYVIDPGFVKARSYDP 385
Query: 812 RTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGN 871
GMESL VVP SKA Q K FRLY ++ +LED+T PEI+R NL N
Sbjct: 386 SKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFE-KLEDSTKPEIKRCNLSN 444
Query: 872 AVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGDLTK-LGRRMAEFPLD 930
+L LKALGI+D++ FDF+D P ++ AL +L++LGAL G L +G +M+ PL+
Sbjct: 445 IILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLE 504
Query: 931 PMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVL 990
P+ K L+ + ++ C+EE++ ++LSV +IFY P++K A T++ +F + GDHL
Sbjct: 505 PVYSKALILANQFNCLEEMLITVAVLSVE-SIFYDPREKREEARTSKNHFASVEGDHLTY 563
Query: 991 LNIYNQWAD-------------AD-FSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
L++Y + + D +WC EN++ RS+K ARD+ Q+ V+++
Sbjct: 564 LSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGF 623
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLY 1096
+ S + + R+ + A +F A+ G+Y+ + + V IHP S LF P V++
Sbjct: 624 NVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIF 683
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1130
+EL+ T+K++++ +T I+S WL E+APH+++ E
Sbjct: 684 NELMQTSKKYIKNLTIIDSLWLSELAPHHFQTAE 717
Score = 494 (179.0 bits), Expect = 1.1e-77, Sum P(3) = 1.1e-77
Identities = 100/193 (51%), Positives = 133/193 (68%)
Query: 49 SDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH 108
S LKL+I SA+LDA+ FSE+F A + GR+FPVDI YT PE+DY+DA +V+I QIH
Sbjct: 227 SPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIH 286
Query: 109 ATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPT 168
+ GDILVFLTGQ+EIE+ ++Q+R++ + ++L+ L ++S LP++ Q K+F P
Sbjct: 287 FEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPA 346
Query: 169 PPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRA 228
P RKV+LATNIAETS+TI I YVIDPGF K +++ GMESL VVP SKA QR+
Sbjct: 347 PTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRS 406
Query: 229 GVITGFNPLSDFR 241
G P FR
Sbjct: 407 GRAGREGPGKSFR 419
Score = 334 (122.6 bits), Expect = 6.5e-91, Sum P(2) = 6.5e-91
Identities = 73/161 (45%), Positives = 101/161 (62%)
Query: 635 FIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
F+Q S P + + +QK I E ++SLPI ++ L++ V+ + +LII GET
Sbjct: 12 FVQN-SRPNPKSPTVSPFSMRQK----IAEHRRSLPIASVEKRLVEEVQKNDILIIVGET 66
Query: 695 GSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFE 754
GSGKTTQ+PQ+L+ AGF ++ IG TQP EE V+LG +VGY+IRF+
Sbjct: 67 GSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFD 126
Query: 755 DCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
D TS T +KYMTDG L RE L +P L+ YSV+I+DEAH +
Sbjct: 127 DTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDR 167
Score = 253 (94.1 bits), Expect = 1.1e-77, Sum P(3) = 1.1e-77
Identities = 62/231 (26%), Positives = 113/231 (48%)
Query: 1081 HPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMP 1140
+P LP +Y + + +F + + +L V +Y PRE +
Sbjct: 492 NPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEA----- 546
Query: 1141 KTLGKSRAELGGDHLVLLNIYNQWAD-------------AD-FSTQWCYENFIQHRSMKR 1186
+T A + GDHL L++Y + + D +WC EN++ RS+K
Sbjct: 547 RTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKH 606
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVM 1246
ARD+ Q+ V+++ + S + + R+ + A +F A+ G+Y+ + + V
Sbjct: 607 ARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVH 666
Query: 1247 IHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
IHP S LF P V+++EL+ T+K++++ +T I+S WL E+APH+++ E
Sbjct: 667 IHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHFQTAE 717
Score = 148 (57.2 bits), Expect = 1.1e-77, Sum P(3) = 1.1e-77
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS 49
MTDG L RE L +P L+ YSV+I+DEAH+R++HTD+L L+K I R RS
Sbjct: 138 MTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRS 186
Score = 39 (18.8 bits), Expect = 8.0e-60, Sum P(2) = 8.0e-60
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 193 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 226
++ + GFC++ T + V ++K A +
Sbjct: 77 FLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEE 110
Score = 39 (18.8 bits), Expect = 7.0e-47, Sum P(3) = 7.0e-47
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 1022 DVREQLIGLVQRVEMELVSNPTETVNIRKAI 1052
DV L+ +QR + VS TE N+ +
Sbjct: 172 DVLLALLKKIQRTRSQPVSEKTEFGNVASQV 202
Score = 39 (18.8 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 1189 DVREQLIGLVQRVEMELVSNPTETVNIRKAI 1219
DV L+ +QR + VS TE N+ +
Sbjct: 172 DVLLALLKKIQRTRSQPVSEKTEFGNVASQV 202
Score = 39 (18.8 bits), Expect = 9.9e-16, Sum P(3) = 9.9e-16
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 830
++ + GFC++ T + V ++K A +
Sbjct: 77 FLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEE 110
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 536 (193.7 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 121/345 (35%), Positives = 197/345 (57%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
Y++D GF KQ N NSR G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 324 YIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCM 383
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ T+PEIQR +L + +L LK LG++D+I F +LD P ++ AL+QLY A++ G+
Sbjct: 384 PEYTIPEIQRTSLTSVILTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGE 443
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRP--KDKIIHAD 974
+TKLGR M EFPL P + + LL + C + ++ +A+MLSV IF RP +K A+
Sbjct: 444 VTKLGRLMVEFPLPPNLTRALLKAAALGCEDIMLPVAAMLSVEN-IFIRPGKPEKQKEAE 502
Query: 975 TARKNFFMLGG---DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
K G D L+LL ++ + ++ + WC EN+I R++K A V QL ++
Sbjct: 503 VRHKEIAACSGGSNDFLMLLCVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREIL 562
Query: 1032 QRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNS 1084
R++ + P E +R+ + GYF ++A+ S S+ T H +V+IHP+S
Sbjct: 563 LRLKQQK-DFPHERFEGSRSELLRQCLCLGYFTNVARRSIGKSFCTMDGHGSSVLIHPSS 621
Query: 1085 SLF-EELPR-WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
LF +EL W+++H+++ T++ ++R V I W+ ++ P ++
Sbjct: 622 CLFGQELQLDWIIFHDVLVTSRVYVRTVCPIRYDWVKDLLPKLHE 666
Score = 410 (149.4 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 92/195 (47%), Positives = 121/195 (62%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPV-----DIYYTKAPEAD-YIDACV 101
++ LK+++ SATL+ +K S F+ + PVF IPGR +PV ++ K E+ Y+ V
Sbjct: 166 KTPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVV 225
Query: 102 VSILQIHATQPLGDILVFLTGQEEIE-TCN------EILQDRVRRLGSKIKELIILPVYS 154
L +H + GDILVFLTGQ EIE C+ EIL R + L+IL +Y
Sbjct: 226 KMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYG 285
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++PTD Q +IF P P RK V+ATNIA TSLTID I Y++D GF KQ N NSR G++ L
Sbjct: 286 SMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDIL 345
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QRAG
Sbjct: 346 EVVPISKSEAQQRAG 360
Score = 366 (133.9 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 78/175 (44%), Positives = 111/175 (63%)
Query: 653 TEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
T+K+ + E+KK LPIY +K L+ AV ++ LI+ GETGSGKTTQ+PQYL++AG +
Sbjct: 3 TKKRSSETEHHESKK-LPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLS 61
Query: 713 KDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
++ +IG TQP EM V+LG EVGY +RF+DC+++ T+IKYMTDG L
Sbjct: 62 RNG-RIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLL 120
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDP--GFCKQNNFNSRTGMES-LTVVPIS 824
RE L++P L YS++I+DEAH + D G K+ G ++ L VV +S
Sbjct: 121 REILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMS 175
Score = 298 (110.0 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 65/151 (43%), Positives = 95/151 (62%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRF-----RSDLKLLI 55
MTDG L RE L++P L YS++I+DEAHER+L+TD+L GL+K + ++ LK+++
Sbjct: 114 MTDGCLLREILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVV 173
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPV-----DIYYTKAPEAD-YIDACVVSILQIHA 109
SATL+ +K S F+ + PVF IPGR +PV ++ K E+ Y+ V L +H
Sbjct: 174 MSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHT 233
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRL 140
+ GDILVFLTGQ EIE ++L ++ L
Sbjct: 234 NEAAGDILVFLTGQSEIEKACDLLFEKAEIL 264
Score = 188 (71.2 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 46/155 (29%), Positives = 87/155 (56%)
Query: 1151 GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSN 1208
GG D L+LL ++ + ++ + WC EN+I R++K A V QL ++ R++ +
Sbjct: 513 GGSNDFLMLLCVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREILLRLKQQK-DF 571
Query: 1209 PTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNSSLF-EELPR- 1259
P E +R+ + GYF ++A+ S S+ T H +V+IHP+S LF +EL
Sbjct: 572 PHERFEGSRSELLRQCLCLGYFTNVARRSIGKSFCTMDGHGSSVLIHPSSCLFGQELQLD 631
Query: 1260 WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
W+++H+++ T++ ++R V I W+ ++ P ++
Sbjct: 632 WIIFHDVLVTSRVYVRTVCPIRYDWVKDLLPKLHE 666
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 498 (180.4 bits), Expect = 4.2e-88, Sum P(3) = 4.2e-88
Identities = 120/360 (33%), Positives = 196/360 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 311 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 370
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 371 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 429
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 430 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 488
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+++ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 489 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 548
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+
Sbjct: 549 IRKLKQQS-DFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPS 607
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H + +L +++
Sbjct: 608 SALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 667
Score = 289 (106.8 bits), Expect = 4.2e-88, Sum P(3) = 4.2e-88
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 50 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 109
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 110 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 169
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 170 NEMAGDILVFLTGQFEIEKSCELL 193
Score = 209 (78.6 bits), Expect = 4.2e-88, Sum P(3) = 4.2e-88
Identities = 43/75 (57%), Positives = 53/75 (70%)
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
N + Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 273 NEKLNQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 332
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 333 EVVPISKSEALQRSG 347
Score = 200 (75.5 bits), Expect = 5.0e-61, Sum P(2) = 5.0e-61
Identities = 38/83 (45%), Positives = 50/83 (60%)
Query: 718 IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS 777
IG TQP EEM LG +VGY +RF+DC+S+ T IKYMTDG L + L
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Query: 778 EPDLASYSVMIIDEAHPKVYVID 800
+P+L +SV+I+DEAH + D
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTD 84
Score = 190 (71.9 bits), Expect = 5.7e-60, Sum P(2) = 5.7e-60
Identities = 54/157 (34%), Positives = 76/157 (48%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 102 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 161
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 162 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 221
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNI 191
++ T QT + T K + + T LTI I
Sbjct: 222 SMTTVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGI 258
Score = 180 (68.4 bits), Expect = 6.8e-52, Sum P(3) = 6.8e-52
Identities = 49/191 (25%), Positives = 94/191 (49%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 478 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 537
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 538 AFRVEAQLRELIRKLKQQS-DFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 596
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IHP+S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +
Sbjct: 597 GRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNA 656
Query: 1296 RELEDSTNKKM 1306
+L +++
Sbjct: 657 HDLSSVARREV 667
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 725 (260.3 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 152/377 (40%), Positives = 226/377 (59%)
Query: 762 IIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVV 821
+ + + D R+ + ++A S+ I D VYV+D GF K +++S +G+ESL +V
Sbjct: 348 VFESVGDSKKIRKIIISTNIAETSITI-DGV---VYVVDCGFVKIKSYDSESGLESLVIV 403
Query: 822 PISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI 881
P SK+SANQ KC+RLYT Y+ L D T+PEIQR NL N +L LKALGI
Sbjct: 404 PTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGI 463
Query: 882 NDLIHFDFLDPPPHETLVLALEQLYALGALNHHGDLTK-LGRRMAEFPLDPMMGKMLLAS 940
+++++FDF+ PP +L+ LE LY LGAL+ +G LT G MAEFP DP KM++ S
Sbjct: 464 DNILNFDFISQPPSSSLIRGLEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQS 523
Query: 941 EK--YKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA 998
+ C +E +TI +ML++ G +F K +RK+ + GDHL LLNI+N +
Sbjct: 524 SSNGFNCSDECITITAMLNIQG-LFTNQNHK------SRKHLLVKEGDHLTLLNIFNSFI 576
Query: 999 DADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS------NPTETVN-IRKA 1051
S QWC ++ I +++M+R VR+QL+ ++ + ++S N + N IRKA
Sbjct: 577 SNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISCFDSNNNREQCSNLIRKA 636
Query: 1052 ITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL-FEELPRWVLYHELVFTTKEFMRQV 1110
I +G+F + A+L GSY+T + + +HP S L P+WV+++E+ TTKE+M+ V
Sbjct: 637 IVSGFFTNAAQLQPDGSYQTIREKHKLWLHPTSVLCLSNSPQWVIFNEVTITTKEYMKDV 696
Query: 1111 TEIESKWLLEVAPHYYK 1127
T IE WL E+APHYYK
Sbjct: 697 TSIEPNWLFEIAPHYYK 713
Score = 361 (132.1 bits), Expect = 5.4e-71, Sum P(3) = 5.4e-71
Identities = 76/173 (43%), Positives = 112/173 (64%)
Query: 70 DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIETC 129
D + + I GR +PVDI+Y + ++YI + +I+ IH TQP GDILVFLTGQEEIE
Sbjct: 243 DTSTILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKL 302
Query: 130 NEILQDR---VRRLGSK--------IKELIILPVYSNLPTDMQTKIF--LPTPPNARKVV 176
+ L D+ +R+ + + +LP+YS L + Q K+F + RK++
Sbjct: 303 IQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKII 362
Query: 177 LATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
++TNIAETS+TID ++YV+D GF K +++S +G+ESL +VP SK+SANQRAG
Sbjct: 363 ISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAG 415
Score = 326 (119.8 bits), Expect = 5.4e-71, Sum P(3) = 5.4e-71
Identities = 66/161 (40%), Positives = 98/161 (60%)
Query: 1145 KSRAEL---GGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV 1201
KSR L GDHL LLNI+N + S QWC ++ I +++M+R VR+QL+ ++
Sbjct: 553 KSRKHLLVKEGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKY 612
Query: 1202 EMELVS------NPTETVN-IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL- 1253
+ ++S N + N IRKAI +G+F + A+L GSY+T + + +HP S L
Sbjct: 613 SINVISCFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIREKHKLWLHPTSVLC 672
Query: 1254 FEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
P+WV+++E+ TTKE+M+ VT IE WL E+APHYYK
Sbjct: 673 LSNSPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYK 713
Score = 288 (106.4 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 69/191 (36%), Positives = 106/191 (55%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + +KL I++ + SLPIY ++ ++ + + L+I G TG GK+TQIPQYL
Sbjct: 34 GNDNFIYNSNQKLTIQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLF 93
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVK-LGCEVGYAIRFEDCTSE-RTIIKY 765
E+G++ I CTQP +EMG + +G VGY++RF++ S+ T IKY
Sbjct: 94 ESGWSDGFRTILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKY 153
Query: 766 MTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID--PGFCKQ-----NNFNSRTGMESL 818
+TDG L RE + +P L YSV++IDEAH + D G K+ N+ N+ ++
Sbjct: 154 VTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNS 213
Query: 819 TVVPISKASAN 829
+ IS A+ N
Sbjct: 214 LKLIISSATLN 224
Score = 167 (63.8 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 39/80 (48%), Positives = 53/80 (66%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD---------- 50
+TDG L RE + +P L YSV++IDEAHER+L TD+L GL+K + + R+
Sbjct: 154 VTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNS 213
Query: 51 LKLLISSATLDAQKFSEFFD 70
LKL+ISSATL+A F FF+
Sbjct: 214 LKLIISSATLNANDFFNFFN 233
Score = 39 (18.8 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASAN 225
V++ E SL D ++ ++ K+N+ N+ ++ + IS A+ N
Sbjct: 174 VIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLN 224
Score = 38 (18.4 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 992 NIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
N N D D S + +NFI + + K +++Q I L
Sbjct: 19 NNNNSLFDKDSSLSFGNDNFIYNSNQKLT--IQQQRISL 55
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 605 (218.0 bits), Expect = 1.4e-84, Sum P(2) = 1.4e-84
Identities = 136/369 (36%), Positives = 214/369 (57%)
Query: 768 DGTLH--REFLSEPDLASYSVMIIDEAHPKV-YVIDPGFCKQNNFNSRTGMESLTVVPIS 824
D T H R+ + ++A S+ I P + YVID G+ K ++ G+E+L V +S
Sbjct: 348 DSTPHGTRKVVVATNIAEASITI-----PGICYVIDTGYVKLRAQHAANGVETLMRVTVS 402
Query: 825 KASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDL 884
KASA Q KC+RLY ++ E TVPEIQR + + +L LKALG+ ++
Sbjct: 403 KASAEQRAGRAGRIRPGKCYRLYPESEFERFAE-GTVPEIQRCQMASTILQLKALGVQNV 461
Query: 885 IHFDFLDPPPHETLVLALEQLYALGALNHHGDLTK-LGRRMAEFPLDPMMGKMLLASEKY 943
F +L PPP ++ LE LYALGA++ LT LG +MAEFPL PM K LL S ++
Sbjct: 462 HRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEF 521
Query: 944 KCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFS 1003
C E+VTI +M+ + +F P + AD RK F + GDH+ +LN++ ++ + S
Sbjct: 522 GCSTEMVTIVAMMQIQD-VFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRS 580
Query: 1004 TQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP---TETVNIRKAITAGYFYHI 1060
+WC ++F+ +R + RA +VR QL+ L++R E+E VS+ + NIR+ + G+F
Sbjct: 581 KKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQA 640
Query: 1061 AKLSKSGSYKTAKHNQTVMIHPNSSLF--EELPRWVLYHELVFTTKEFMRQVTEIESKWL 1118
A+ +G Y T K + ++ SS+ ++ P+WV++ E++ ++ +R VT IE +WL
Sbjct: 641 AQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWL 697
Query: 1119 LEVAPHYYK 1127
E+APHYY+
Sbjct: 698 YELAPHYYE 706
Score = 509 (184.2 bits), Expect = 2.8e-69, Sum P(2) = 2.8e-69
Identities = 120/296 (40%), Positives = 169/296 (57%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L++P L+ YS+++IDEAHER+ +TDIL GL++ I++ R+DL++++SSATL
Sbjct: 174 MTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATL 233
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA+ F +FF D A + + GR PV +++TK DY + V +++ IH
Sbjct: 234 DAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKH 293
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPP 170
+ GDILVFLTGQ+E+E E L++ L L ++P Y LP Q K F TP
Sbjct: 294 ENPGDILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPH 352
Query: 171 NARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGV 230
RKVV+ATNIAE S+TI I YVID G+ K ++ G+E+L V +SKASA QRAG
Sbjct: 353 GTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGR 412
Query: 231 ITGFNPLSDFRGCAHVLGEEVLRGCAHVLGEEVLRPEVSQPFRSFGYLGVMQDCRY 286
P C + E A E+ R +++ LGV R+
Sbjct: 413 AGRIRPGK----CYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRF 464
Score = 281 (104.0 bits), Expect = 1.4e-84, Sum P(2) = 1.4e-84
Identities = 56/136 (41%), Positives = 85/136 (62%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
LNI++ + LPI+ + ++ ++ +II GETG GK+TQ+PQ+L EAG+ D +I
Sbjct: 68 LNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIV 127
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
TQP EE LG +VGY +RF+D + + T +K+MTDG L RE L++P
Sbjct: 128 ITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADP 187
Query: 780 DLASYSVMIIDEAHPK 795
L+ YS+++IDEAH +
Sbjct: 188 LLSKYSIIMIDEAHER 203
Score = 265 (98.3 bits), Expect = 2.8e-69, Sum P(2) = 2.8e-69
Identities = 64/214 (29%), Positives = 115/214 (53%)
Query: 1089 ELPRWVLYHELVFTTKEF---MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1145
E P ++ + + + EF VT + + +V Y+ R D KK
Sbjct: 504 EFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKF------ 557
Query: 1146 SRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL 1205
A GDH+ +LN++ ++ + S +WC ++F+ +R + RA +VR QL+ L++R E+E
Sbjct: 558 --AVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEK 615
Query: 1206 VSNP---TETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF--EELPRW 1260
VS+ + NIR+ + G+F A+ +G Y T K + ++ SS+ ++ P+W
Sbjct: 616 VSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKW 675
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
V++ E++ ++ +R VT IE +WL E+APHYY+
Sbjct: 676 VIFTEVM---QDSIRDVTVIEPEWLYELAPHYYE 706
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 505 (182.8 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 114/347 (32%), Positives = 195/347 (56%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q K +RLY+ ++ +
Sbjct: 308 YVVDSGFVKQLNHNPRVGLDILEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCM 367
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNH--H 914
D+TVPEI+R +L + +L LK L ++D+I F +LD P ++ AL+QLY A++
Sbjct: 368 PDHTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRR 427
Query: 915 GDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKD--KIIH 972
G +T+LG + +FPL P + ++ + C + ++ IA+MLSV +F RP D K
Sbjct: 428 GHVTRLGEFLVQFPLPPNLSCAVIKAASLDCEDMLLPIAAMLSVEN-VFIRPGDPQKQKE 486
Query: 973 ADTARKNFF-MLGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIG 1029
A+ + +GG D LLNI+ Q + + WC++ +I R++K A V +QL
Sbjct: 487 AELQHQELSSQVGGCNDFATLLNIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLRE 546
Query: 1030 LVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHP 1082
+ +++ +L P ET +R+ + AGYF ++A+ S + ++ T H V IHP
Sbjct: 547 ITSKLK-QLPDFPKETFEGSRTELLRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHP 605
Query: 1083 NSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
+S+L+ + R W+++H++ T+K ++R V + +W+ ++ P ++
Sbjct: 606 SSTLYNQETRLEWIIFHDVTVTSKIYVRTVCPVRYEWVKDLLPRLHQ 652
Score = 396 (144.5 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 88/195 (45%), Positives = 120/195 (61%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPV-DIYYTKAPEAD-----YIDACV 101
++++K+++ SATL+ K SEFF V IPGR +PV +I+ D Y+ V
Sbjct: 150 KTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAV 209
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSK-------IKELIILPVYS 154
L IH +P GDILVFLTGQ EIE ++L + + + I+ L+ILP+Y
Sbjct: 210 KVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYG 269
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP P RK V++TNIA TSLTI+ + YV+D GF KQ N N R G++ L
Sbjct: 270 SMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDIL 329
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QRAG
Sbjct: 330 EVVPISKSEAMQRAG 344
Score = 315 (115.9 bits), Expect = 4.6e-74, Sum P(2) = 4.6e-74
Identities = 63/127 (49%), Positives = 83/127 (65%)
Query: 669 LPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXX 728
LPI ++ L+ AV + LI+ GETGSGK+TQ+P+YL+EAG + IG TQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGA-IGVTQPRRVAT 59
Query: 729 XXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMI 788
EEMG LG VGY +RF+DC+SE T IKYMTDG L R L++P L+ YS++I
Sbjct: 60 ISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIII 119
Query: 789 IDEAHPK 795
+DEAH +
Sbjct: 120 LDEAHER 126
Score = 288 (106.4 bits), Expect = 3.2e-71, Sum P(2) = 3.2e-71
Identities = 66/145 (45%), Positives = 90/145 (62%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRF------RSDLKLL 54
MTDG L R L++P L+ YS++I+DEAHER+L TDILFGL+K + ++++K++
Sbjct: 97 MTDGCLLRHILADPLLSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVV 156
Query: 55 ISSATLDAQKFSEFFDDAPVFRIPGRRFPV-DIYYTKAPEAD-----YIDACVVSILQIH 108
+ SATL+ K SEFF V IPGR +PV +I+ D Y+ V L IH
Sbjct: 157 VMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIH 216
Query: 109 ATQPLGDILVFLTGQEEIETCNEIL 133
+P GDILVFLTGQ EIE ++L
Sbjct: 217 LNEPEGDILVFLTGQIEIEKACDLL 241
Score = 208 (78.3 bits), Expect = 7.5e-50, Sum P(2) = 7.5e-50
Identities = 45/158 (28%), Positives = 90/158 (56%)
Query: 1148 AELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL 1205
+++GG D LLNI+ Q + + WC++ +I R++K A V +QL + +++ +L
Sbjct: 496 SQVGGCNDFATLLNIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLK-QL 554
Query: 1206 VSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPNSSLFEELP 1258
P ET +R+ + AGYF ++A+ S + ++ T H V IHP+S+L+ +
Sbjct: 555 PDFPKETFEGSRTELLRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTLYNQET 614
Query: 1259 R--WVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
R W+++H++ T+K ++R V + +W+ ++ P ++
Sbjct: 615 RLEWIIFHDVTVTSKIYVRTVCPVRYEWVKDLLPRLHQ 652
Score = 43 (20.2 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 163 KIFLPTPPNARKVVLATNIAETSLTIDNI 191
K+FL P RK + + +L +D +
Sbjct: 139 KLFLQNKPPGRKTEMKVVVMSATLEVDKL 167
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 510 (184.6 bits), Expect = 1.4e-81, Sum P(3) = 1.4e-81
Identities = 103/231 (44%), Positives = 148/231 (64%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRF--RSDLKLLISSA 58
+TDG L RE + + +L YS +I+DEAHERT+ TD++ G +K I+ R DLK+++ SA
Sbjct: 275 LTDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSA 334
Query: 59 TLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILV 118
TL+A+ FS FF +AP+ I G+ +PV +Y A D +D + SI+QI+ +P GD+L
Sbjct: 335 TLNAELFSNFFGNAPILYIEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLC 394
Query: 119 FLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
FL GQEEI+ C + L+ +L + ++ LP+Y+ L Q+KIF P RKV+LA
Sbjct: 395 FLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILA 454
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TNIAETS+T+ + YVID G K + G+ +L PIS+ASA QRAG
Sbjct: 455 TNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAG 505
Score = 294 (108.6 bits), Expect = 2.0e-56, Sum P(4) = 2.0e-56
Identities = 63/145 (43%), Positives = 88/145 (60%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQP 723
+ ++ LPIY K +I+ + ++QV I+ GETGSGK+TQIPQ+L KM IG TQP
Sbjct: 177 QIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPEN---PKM-IGVTQP 232
Query: 724 XXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
EE G KLG +VGY +RF + T+ +T +KY+TDG L RE + + +L
Sbjct: 233 RRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTK 292
Query: 784 YSVMIIDEAHPKVYVID--PGFCKQ 806
YS +I+DEAH + + D GF KQ
Sbjct: 293 YSTIILDEAHERTILTDLIMGFLKQ 317
Score = 283 (104.7 bits), Expect = 1.4e-81, Sum P(3) = 1.4e-81
Identities = 75/233 (32%), Positives = 113/233 (48%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVID G K + G+ +L PIS+ASA Q K FRLY Y L
Sbjct: 469 YVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYM-AL 527
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
EI+R ++ VL LK LG++DL+++ +L+ P + ++ AL LY LGALN G
Sbjct: 528 PKQQESEIKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGK 587
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+T LG +M+ PL P + +L+ + ++ + ++ IAS LSV+ I + +
Sbjct: 588 VTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVIDIASCLSVDNLITNVTGEARDEINFK 647
Query: 977 RKNFFMLGGDH--LVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQL 1027
R+ LG H L+ L Y Q A +WC E + K ++ QL
Sbjct: 648 RRQHCPLGNIHGDLIALYEYFQAYQAQ-GKEWCKELAFSFKGFKNVEKIKYQL 699
Score = 152 (58.6 bits), Expect = 1.4e-81, Sum P(3) = 1.4e-81
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 1013 QHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTA 1072
Q S+ A + +QL L +++ E + +I K+ GY + A S++T
Sbjct: 709 QDDSLTNA-EKNKQLAKLRAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTF 767
Query: 1073 KHNQTVMIHPNSSLFEELPRW--VLYHELVFTTKEFMRQVTEIESKWLLEVAPH 1124
Q + +HP+S+LF + P ++Y E VFTTK + R V+ IE WL E+APH
Sbjct: 768 NTGQLISVHPSSTLFGK-PNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAPH 820
Score = 152 (58.6 bits), Expect = 1.4e-81, Sum P(3) = 1.4e-81
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 1180 QHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTA 1239
Q S+ A + +QL L +++ E + +I K+ GY + A S++T
Sbjct: 709 QDDSLTNA-EKNKQLAKLRAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTF 767
Query: 1240 KHNQTVMIHPNSSLFEELPRW--VLYHELVFTTKEFMRQVTEIESKWLLEVAPH 1291
Q + +HP+S+LF + P ++Y E VFTTK + R V+ IE WL E+APH
Sbjct: 768 NTGQLISVHPSSTLFGK-PNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAPH 820
Score = 45 (20.9 bits), Expect = 1.2e-56, Sum P(3) = 1.2e-56
Identities = 14/52 (26%), Positives = 20/52 (38%)
Query: 1145 KSRAELGGDH--LVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQL 1194
+ LG H L+ L Y Q A +WC E + K ++ QL
Sbjct: 649 RQHCPLGNIHGDLIALYEYFQAYQAQ-GKEWCKELAFSFKGFKNVEKIKYQL 699
Score = 44 (20.5 bits), Expect = 2.9e-70, Sum P(3) = 2.9e-70
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 1098 ELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDS-TNKKMPKTLGKSRAELGGD 1153
EL F+ K F + V +I K+ L+ + + +DS TN + K L K RA+L +
Sbjct: 681 ELAFSFKGF-KNVEKI--KYQLQ--EYMMTTIKQDDSLTNAEKNKQLAKLRAQLDNE 732
Score = 43 (20.2 bits), Expect = 3.7e-70, Sum P(3) = 3.7e-70
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 1265 ELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDS-TNKKMPKTLGKSRAEL 1317
EL F+ K F + V +I K+ L+ + + +DS TN + K L K RA+L
Sbjct: 681 ELAFSFKGF-KNVEKI--KYQLQ--EYMMTTIKQDDSLTNAEKNKQLAKLRAQL 729
Score = 41 (19.5 bits), Expect = 2.0e-56, Sum P(4) = 2.0e-56
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 620 EHQEQYELLLDNQIDFIQAL-SLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQD 677
+H+ E+ + + ID + +LP R + E+ K K K +E +K++ +Y + D
Sbjct: 93 QHEGFEEIEVTDDIDETEEPENLP-TRTQQEKHQHSKNKFKQKLEFKRKTV-VYKDQDD 149
Score = 37 (18.1 bits), Expect = 5.3e-56, Sum P(4) = 5.3e-56
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 435 PKVRAFMGHFLTDSDDDRKERDEFSERLKNRDKNNTKN 472
P+ F +TD D+ +E + R + ++KN
Sbjct: 92 PQHEGFEEIEVTDDIDETEEPENLPTRTQQEKHQHSKN 129
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 498 (180.4 bits), Expect = 5.9e-81, Sum P(2) = 5.9e-81
Identities = 120/360 (33%), Positives = 196/360 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 282 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 341
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 342 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 400
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 401 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 459
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+++ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 460 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 519
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+
Sbjct: 520 IRKLKQQS-DFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPS 578
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H + +L +++
Sbjct: 579 SALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 638
Score = 383 (139.9 bits), Expect = 5.9e-81, Sum P(2) = 5.9e-81
Identities = 88/195 (45%), Positives = 116/195 (59%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 124 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 183
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 184 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 243
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 244 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 303
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 304 EVVPISKSEALQRSG 318
Score = 289 (106.8 bits), Expect = 4.8e-71, Sum P(2) = 4.8e-71
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 72 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 131
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 132 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 191
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 192 NEMAGDILVFLTGQFEIEKSCELL 215
Score = 180 (68.4 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 49/191 (25%), Positives = 94/191 (49%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 449 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 508
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 509 AFRVEAQLRELIRKLKQQS-DFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 567
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IHP+S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +
Sbjct: 568 GRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNA 627
Query: 1296 RELEDSTNKKM 1306
+L +++
Sbjct: 628 HDLSSVARREV 638
Score = 108 (43.1 bits), Expect = 5.5e-52, Sum P(2) = 5.5e-52
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 761 TIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
T IKYMTDG L + L +P+L +SV+I+DEAH + D
Sbjct: 67 TAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTD 106
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 501 (181.4 bits), Expect = 4.0e-80, Sum P(2) = 4.0e-80
Identities = 122/360 (33%), Positives = 195/360 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 477
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 536
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+K+ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 537 EQKHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 596
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+
Sbjct: 597 IRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPS 655
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +L ++M
Sbjct: 656 SALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREM 715
Score = 383 (139.9 bits), Expect = 4.0e-80, Sum P(2) = 4.0e-80
Identities = 88/195 (45%), Positives = 116/195 (59%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 381 EVVPISKSEALQRSG 395
Score = 337 (123.7 bits), Expect = 2.8e-75, Sum P(2) = 2.8e-75
Identities = 68/151 (45%), Positives = 96/151 (63%)
Query: 652 MTEKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEA 709
+ ++++K +E T + PI ++ LI AVRD+ LI+ G TGSGKTTQ+P+YL+EA
Sbjct: 34 IADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA 93
Query: 710 GFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDG 769
GF++ M IG TQP EEM LG +VGY +RF+DC+S+ T IKYMTDG
Sbjct: 94 GFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDG 152
Query: 770 TLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
L + L +P+L +SV+I+DEAH + D
Sbjct: 153 CLLKHILGDPNLNKFSVIILDEAHERTLTTD 183
Score = 287 (106.1 bits), Expect = 5.3e-70, Sum P(2) = 5.3e-70
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELL 292
Score = 180 (68.4 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 50/191 (26%), Positives = 93/191 (48%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 526 RPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 585
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 586 AFRVEAQLRELIRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 644
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IHP+S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H
Sbjct: 645 GRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNA 704
Query: 1296 RELEDSTNKKM 1306
+L ++M
Sbjct: 705 HDLSSVARREM 715
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 499 (180.7 bits), Expect = 7.0e-80, Sum P(2) = 7.0e-80
Identities = 121/360 (33%), Positives = 195/360 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 477
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 536
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+++ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 537 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 596
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+
Sbjct: 597 IRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPS 655
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +L ++M
Sbjct: 656 SALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREM 715
Score = 383 (139.9 bits), Expect = 7.0e-80, Sum P(2) = 7.0e-80
Identities = 88/195 (45%), Positives = 116/195 (59%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 381 EVVPISKSEALQRSG 395
Score = 340 (124.7 bits), Expect = 2.4e-75, Sum P(2) = 2.4e-75
Identities = 68/151 (45%), Positives = 97/151 (64%)
Query: 652 MTEKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEA 709
+ ++++K +E T + PI ++ LI AVRD+ LI+ G TGSGKTTQ+P+YL+EA
Sbjct: 34 IADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA 93
Query: 710 GFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDG 769
GF++ M IG TQP EEM LG +VGY +RF+DC+S+ T IKYMTDG
Sbjct: 94 GFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDG 152
Query: 770 TLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
L + L +P+L+ +SV+I+DEAH + D
Sbjct: 153 CLLKHILGDPNLSKFSVIILDEAHERTLTTD 183
Score = 290 (107.1 bits), Expect = 4.5e-70, Sum P(2) = 4.5e-70
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L+ +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELL 292
Score = 180 (68.4 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 50/191 (26%), Positives = 93/191 (48%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 526 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 585
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 586 AFRVEAQLRELIRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 644
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IHP+S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H
Sbjct: 645 GRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNA 704
Query: 1296 RELEDSTNKKM 1306
+L ++M
Sbjct: 705 HDLSSVARREM 715
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 498 (180.4 bits), Expect = 9.1e-80, Sum P(2) = 9.1e-80
Identities = 120/360 (33%), Positives = 196/360 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 477
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 536
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+++ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 537 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 596
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+
Sbjct: 597 IRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPS 655
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H + +L +++
Sbjct: 656 SALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 715
Score = 383 (139.9 bits), Expect = 9.1e-80, Sum P(2) = 9.1e-80
Identities = 88/195 (45%), Positives = 116/195 (59%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 381 EVVPISKSEALQRSG 395
Score = 340 (124.7 bits), Expect = 3.1e-75, Sum P(2) = 3.1e-75
Identities = 72/164 (43%), Positives = 101/164 (61%)
Query: 644 NRDKGEEE-----MTEKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
+RD EE + ++++K +E T + PI ++ LI AVRD+ LI+ G TGS
Sbjct: 21 SRDLQEERPSAGSVADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGS 80
Query: 697 GKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDC 756
GKTTQ+P+YL+EAGF++ M IG TQP EEM LG +VGY +RF+DC
Sbjct: 81 GKTTQLPKYLYEAGFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDC 139
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
+S+ T IKYMTDG L + L +P+L +SV+I+DEAH + D
Sbjct: 140 SSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTD 183
Score = 289 (106.8 bits), Expect = 7.4e-70, Sum P(2) = 7.4e-70
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELL 292
Score = 180 (68.4 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 49/191 (25%), Positives = 94/191 (49%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 526 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 585
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 586 AFRVEAQLRELIRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 644
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IHP+S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +
Sbjct: 645 GRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNA 704
Query: 1296 RELEDSTNKKM 1306
+L +++
Sbjct: 705 HDLSSVARREV 715
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 498 (180.4 bits), Expect = 9.1e-80, Sum P(2) = 9.1e-80
Identities = 120/360 (33%), Positives = 196/360 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 477
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 536
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+++ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 537 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 596
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+
Sbjct: 597 IRKLKQQS-DFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPS 655
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H + +L +++
Sbjct: 656 SALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 715
Score = 383 (139.9 bits), Expect = 9.1e-80, Sum P(2) = 9.1e-80
Identities = 88/195 (45%), Positives = 116/195 (59%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 381 EVVPISKSEALQRSG 395
Score = 340 (124.7 bits), Expect = 3.1e-75, Sum P(2) = 3.1e-75
Identities = 71/164 (43%), Positives = 102/164 (62%)
Query: 644 NRDKGEEEMT-----EKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
+RD EE ++ ++++K +E T + PI ++ +I AVRD+ LI+ G TGS
Sbjct: 21 SRDLQEERLSAVCIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGS 80
Query: 697 GKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDC 756
GKTTQ+P+YL+EAGF++ M IG TQP EEM LG +VGY +RF+DC
Sbjct: 81 GKTTQLPKYLYEAGFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDC 139
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
+S+ T IKYMTDG L + L +P+L +SV+I+DEAH + D
Sbjct: 140 SSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTD 183
Score = 289 (106.8 bits), Expect = 7.4e-70, Sum P(2) = 7.4e-70
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELL 292
Score = 180 (68.4 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 49/191 (25%), Positives = 94/191 (49%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 526 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 585
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 586 AFRVEAQLRELIRKLKQQS-DFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 644
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IHP+S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +
Sbjct: 645 GRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNA 704
Query: 1296 RELEDSTNKKM 1306
+L +++
Sbjct: 705 HDLSSVARREV 715
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 498 (180.4 bits), Expect = 9.1e-80, Sum P(2) = 9.1e-80
Identities = 120/360 (33%), Positives = 196/360 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 477
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 536
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+++ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 537 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 596
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+
Sbjct: 597 IRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPS 655
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H + +L +++
Sbjct: 656 SALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 715
Score = 383 (139.9 bits), Expect = 9.1e-80, Sum P(2) = 9.1e-80
Identities = 88/195 (45%), Positives = 116/195 (59%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 381 EVVPISKSEALQRSG 395
Score = 340 (124.7 bits), Expect = 3.1e-75, Sum P(2) = 3.1e-75
Identities = 72/164 (43%), Positives = 101/164 (61%)
Query: 644 NRDKGEEE-----MTEKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
+RD EE + ++++K +E T + PI ++ LI AVRD+ LI+ G TGS
Sbjct: 21 SRDLQEERPSAVTIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGS 80
Query: 697 GKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDC 756
GKTTQ+P+YL+EAGF++ M IG TQP EEM LG +VGY +RF+DC
Sbjct: 81 GKTTQLPKYLYEAGFSQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDC 139
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
+S+ T IKYMTDG L + L +P+L +SV+I+DEAH + D
Sbjct: 140 SSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTD 183
Score = 289 (106.8 bits), Expect = 7.4e-70, Sum P(2) = 7.4e-70
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELL 292
Score = 180 (68.4 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 49/191 (25%), Positives = 94/191 (49%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 526 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 585
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 586 AFRVEAQLRELIRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 644
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IHP+S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +
Sbjct: 645 GRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNA 704
Query: 1296 RELEDSTNKKM 1306
+L +++
Sbjct: 705 HDLSSVARREV 715
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 498 (180.4 bits), Expect = 2.8e-79, Sum P(2) = 2.8e-79
Identities = 120/360 (33%), Positives = 196/360 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 437 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 496
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 497 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 555
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 556 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 614
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+++ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 615 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 674
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IHP+
Sbjct: 675 IRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPS 733
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H + +L +++
Sbjct: 734 SALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 793
Score = 383 (139.9 bits), Expect = 2.8e-79, Sum P(2) = 2.8e-79
Identities = 88/195 (45%), Positives = 116/195 (59%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 279 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 338
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 339 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 398
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 399 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 458
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 459 EVVPISKSEALQRSG 473
Score = 343 (125.8 bits), Expect = 4.6e-75, Sum P(2) = 4.6e-75
Identities = 77/187 (41%), Positives = 108/187 (57%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
V + QE+ E +D Q + A+S+ +KG T ++ T + PI
Sbjct: 85 VAGRAPRRQEEGERSIDLQEERPSAVSIADREEKG---CTSQEGG------TTPTFPIQK 135
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
++ LI AVRD+ LI+ G TGSGKTTQ+P+YL+EAGF++ M IG TQP
Sbjct: 136 QRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVAAISVAQ 194
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEM LG +VGY +RF+DC+S+ T IKYMTDG L + L +P+L +SV+I+DEAH
Sbjct: 195 RVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAH 254
Query: 794 PKVYVID 800
+ D
Sbjct: 255 ERTLTTD 261
Score = 289 (106.8 bits), Expect = 2.3e-69, Sum P(2) = 2.3e-69
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 227 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 286
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 287 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 346
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 347 NEMAGDILVFLTGQFEIEKSCELL 370
Score = 180 (68.4 bits), Expect = 4.8e-45, Sum P(2) = 4.8e-45
Identities = 49/191 (25%), Positives = 94/191 (49%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 604 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 663
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 664 AFRVEAQLRELIRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 722
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IHP+S+L E+ + W+++HE++ TTK + R V I +W+ ++ P H +
Sbjct: 723 GRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNA 782
Query: 1296 RELEDSTNKKM 1306
+L +++
Sbjct: 783 HDLSSVARREV 793
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 615 (221.5 bits), Expect = 6.7e-79, Sum P(2) = 6.7e-79
Identities = 119/231 (51%), Positives = 164/231 (70%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFR-SDLKLLISSAT 59
+TDG L RE LS P L YSV+I+DEAHER+L+TDIL GLVK +VR R S+ K+LI+SAT
Sbjct: 100 LTDGVLLRESLSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSAT 159
Query: 60 LDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVF 119
LD +K SEFF PV +PG+ +PV+I Y+K YI++ + + IH +P GDIL+F
Sbjct: 160 LDGEKVSEFFSGCPVLNVPGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIF 219
Query: 120 LTGQEEIETCNEILQDRVRRLGS-KIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
+TGQ++IE L+++VR L + II P++ +LP +MQ ++F P PPN R+ +++
Sbjct: 220 MTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVS 279
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TNIAETSLT+D ++YVID G+ KQ +N +GM SL V+ ISK ANQRAG
Sbjct: 280 TNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAG 330
Score = 447 (162.4 bits), Expect = 6.2e-66, Sum P(2) = 6.2e-66
Identities = 106/315 (33%), Positives = 170/315 (53%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R F+ ++A S + +D VYVID G+ KQ +N +GM SL V+ ISK ANQ
Sbjct: 274 RRFIVSTNIAETS-LTVDGV---VYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRA 329
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDL--IHFDFL 890
KC+RLY Y+ + D T+PEIQR +L +VL LK+L + D+ + FDFL
Sbjct: 330 GRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFL 389
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
D P E+L AL+QLY + A++ +G +T++GR M++ PL+P + + L+ + + C+ + +
Sbjct: 390 DAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQAL 449
Query: 951 TIASMLSVNGAIF---YRPKDKIIHADTARKNFFMLG-GDHLVLLNIYNQWADADFSTQW 1006
T+ +MLS + +P +K D G GDH+ LL I+ W ++ W
Sbjct: 450 TVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVW 509
Query: 1007 CYENFIQHRSMKRARDVREQLIGLVQRVEMELV---------SNPTETVNIRKAITAGYF 1057
C EN +Q R M +DVR QL ++Q++ + + S+ + +RKA+ G
Sbjct: 510 CKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNA 569
Query: 1058 YHIA-KLSKSGSYKT 1071
IA ++ + Y+T
Sbjct: 570 NQIAERMLRHNGYRT 584
Score = 303 (111.7 bits), Expect = 6.2e-66, Sum P(2) = 6.2e-66
Identities = 62/128 (48%), Positives = 84/128 (65%)
Query: 668 SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXX 727
+LPI F++ +++ V + V++I GETGSGK+TQ+ Q LH G+TK + I TQP
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGV-IAITQPRRVA 61
Query: 728 XXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVM 787
+E+ V LG +VGYAIRFED T+ +T IKY+TDG L RE LS P L YSV+
Sbjct: 62 AVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVI 121
Query: 788 IIDEAHPK 795
I+DEAH +
Sbjct: 122 ILDEAHER 129
Score = 217 (81.4 bits), Expect = 6.7e-79, Sum P(2) = 6.7e-79
Identities = 59/187 (31%), Positives = 97/187 (51%)
Query: 985 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV----- 1039
GDH+ LL I+ W ++ WC EN +Q R M +DVR QL ++Q++ + +
Sbjct: 488 GDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGAD 547
Query: 1040 ----SNPTETVNIRKAITAGYFYHIA-KLSKSGSYKTAK-HNQTVMIHPNSSLFEE---- 1089
S+ + +RKA+ G IA ++ + Y+T +Q V +HP+S L +
Sbjct: 548 GRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSVLSADNDGM 607
Query: 1090 LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK--PRELED--STNKKMP--KT- 1142
+P +V+YHEL+ TT+ FMR V ++ W+ + K R+L + + K+P KT
Sbjct: 608 MPNYVVYHELISTTRPFMRNVCAVDMAWVAPIKRKIEKLNVRKLSGGPAPSFKVPEEKTE 667
Query: 1143 LGKSRAE 1149
L K+ AE
Sbjct: 668 LSKNNAE 674
Score = 214 (80.4 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 48/152 (31%), Positives = 81/152 (53%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV----- 1206
GDH+ LL I+ W ++ WC EN +Q R M +DVR QL ++Q++ + +
Sbjct: 488 GDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGAD 547
Query: 1207 ----SNPTETVNIRKAITAGYFYHIA-KLSKSGSYKTAK-HNQTVMIHPNSSLFEE---- 1256
S+ + +RKA+ G IA ++ + Y+T +Q V +HP+S L +
Sbjct: 548 GRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSVLSADNDGM 607
Query: 1257 LPRWVLYHELVFTTKEFMRQVTEIESKWLLEV 1288
+P +V+YHEL+ TT+ FMR V ++ W+ +
Sbjct: 608 MPNYVVYHELISTTRPFMRNVCAVDMAWVAPI 639
Score = 37 (18.1 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 20/90 (22%), Positives = 36/90 (40%)
Query: 65 FSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQE 124
+ + F DA + I + Y K+ + ID L +++ L D L L
Sbjct: 349 YRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYF-- 406
Query: 125 EIETCNEILQDRVRRLGSKIKELIILPVYS 154
I+ +E + R+G + +L + P S
Sbjct: 407 -IDAIDE--NGAITRIGRTMSDLPLEPSLS 433
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 489 (177.2 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 119/360 (33%), Positives = 193/360 (53%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D GF KQ N N R G++ L VVPISK+ A Q KCFR+Y+ + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVL-ALEQLYALGALNHHG 915
D+ +PEI+R +L + VL LK L I+D+I F +LDPP +E L+L AL+QLY A++ G
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPP-NERLILEALKQLYQCDAIDRSG 477
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+T+LG M EFPL P + ++ + C + ++ IA+MLSV +F RP D +
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEA 536
Query: 976 ARKNFFML---GG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
+++ + GG D L I+ Q + WC +++I R + A V QL L
Sbjct: 537 EQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 596
Query: 1031 VQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK-HNQTVMIHPN 1083
+++++ + P ET +R+ + AGYF ++A+ S ++ T V IH N
Sbjct: 597 IRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHQN 655
Query: 1084 SSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKPRELEDSTNKKM 1139
L E+ + W+++HE++ TTK + R V I +W+ ++ P H + +L +++
Sbjct: 656 CKLHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 715
Score = 383 (139.9 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 88/195 (45%), Positives = 116/195 (59%)
Query: 48 RSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACV 101
+ LK+++ SAT++ K S FF + P+F IPGR +PV + P YI A V
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 102 VSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLG-------SKIKELIILPVYS 154
+ IH + GDILVFLTGQ EIE E+L + + + L+ILP Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
++ TD Q +IFLP PP RK V++TNI+ TSLTID I YV+D GF KQ N N R G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 215 TVVPISKASANQRAG 229
VVPISK+ A QR+G
Sbjct: 381 EVVPISKSEALQRSG 395
Score = 343 (125.8 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 77/187 (41%), Positives = 108/187 (57%)
Query: 614 VGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
V + QE+ E +D Q + A+S+ +KG T ++ T + PI
Sbjct: 7 VAGRAPRRQEEGERSIDLQEERPSAVSIADREEKG---CTSQEGG------TTPTFPIQK 57
Query: 674 FKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
++ LI AVRD+ LI+ G TGSGKTTQ+P+YL+EAGF++ M IG TQP
Sbjct: 58 QRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVAAISVAQ 116
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
EEM LG +VGY +RF+DC+S+ T IKYMTDG L + L +P+L +SV+I+DEAH
Sbjct: 117 RVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAH 176
Query: 794 PKVYVID 800
+ D
Sbjct: 177 ERTLTTD 183
Score = 289 (106.8 bits), Expect = 9.0e-69, Sum P(2) = 9.0e-69
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 208
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 209 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 268
Query: 110 TQPLGDILVFLTGQEEIETCNEIL 133
+ GDILVFLTGQ EIE E+L
Sbjct: 269 NEMAGDILVFLTGQFEIEKSCELL 292
Score = 171 (65.3 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 48/191 (25%), Positives = 91/191 (47%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKR 1186
R ++ K+ + + A+ GG D L I+ Q + WC +++I R +
Sbjct: 526 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFS 585
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAK 1240
A V QL L+++++ + P ET +R+ + AGYF ++A+ S ++ T
Sbjct: 586 AFRVEAQLRELIRKLKQQS-DFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMD 644
Query: 1241 -HNQTVMIHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEIESKWLLEVAP--HYYKP 1295
V IH N L E+ + W+++HE++ TTK + R V I +W+ ++ P H +
Sbjct: 645 GRGSPVHIHQNCKLHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNA 704
Query: 1296 RELEDSTNKKM 1306
+L +++
Sbjct: 705 HDLSSVARREV 715
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 784 (281.0 bits), Expect = 2.9e-77, P = 2.9e-77
Identities = 159/358 (44%), Positives = 229/358 (63%)
Query: 451 DRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRR 510
D +ERD F+ER++ RDK+ T+NV R DK+ R ++P+LR +SRR
Sbjct: 174 DLEERDAFAERVRQRDKDRTRNVL-ERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 232
Query: 511 KYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELEKV 570
+YL KR+ +K+ +LEA++ D+E+LF + EL+ A+E+ A E EK+
Sbjct: 233 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKL 292
Query: 571 Q---RYYMPKGTKG-PXXXXXXXXXXX-XPHYEQRKWEDEQMSSAIFRVGAKDREHQE-Q 624
+ RY+MPK T+G P P EQR+WE+ ++ +A + GA+D QE +
Sbjct: 293 EATNRYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPK 352
Query: 625 YELLLDNQ--IDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAV 682
Y+L+L+ + I+F++A L G+ + + + ++K +I+ ++SLP++PF+++L+ A+
Sbjct: 353 YQLVLEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAI 412
Query: 683 RDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVK 742
+HQVLIIEGETGSGKTTQIPQYL E G+T MKI CTQP EMGVK
Sbjct: 413 ANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVK 472
Query: 743 LGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
LG EVGY+IRFEDCTSERT+++YMTDG L REFLSEPDLASYSV+++DEAH + D
Sbjct: 473 LGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTD 530
Score = 734 (263.4 bits), Expect = 8.2e-72, P = 8.2e-72
Identities = 135/174 (77%), Positives = 158/174 (90%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L REFLSEPDLASYSV+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SAT+
Sbjct: 496 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATM 555
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
D +FS FFDDAPVFRIPGRRFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFL
Sbjct: 556 DTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFL 615
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
TGQEEIE E+LQDR RRLGSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARK
Sbjct: 616 TGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 777 (278.6 bits), Expect = 1.7e-76, P = 1.7e-76
Identities = 157/350 (44%), Positives = 220/350 (62%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
++VID G+CK FN R GM++L + PIS+A+ANQ +CFRLYT AYK+E
Sbjct: 130 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNE 189
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
L TVPEIQR NL N VL+LK+LG+ DL+ F F+DPPP + ++ ++ QL+ LGAL++ G
Sbjct: 190 LLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTG 249
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LT GR M EFPLDP + KML+ S C EI+ I SMLSV AIFYRPK + +D
Sbjct: 250 GLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQ 308
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ F + DHL LN+Y QW + ++ST WC ++FI ++M++ R+VR QL ++ +
Sbjct: 309 IREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQR 368
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE--LPRW 1093
M L S T+ +RK I A YF+ AKL G Y + +HP SSLF P +
Sbjct: 369 MSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 428
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDST--NKKMPK 1141
++YHELV TTKE+M+ VT ++ +WL E+ P +Y ++ S N++ K
Sbjct: 429 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAK 478
Score = 321 (118.1 bits), Expect = 6.5e-43, Sum P(2) = 6.5e-43
Identities = 69/195 (35%), Positives = 110/195 (56%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V +Y+P+ E+ +++ K A DHL LN+Y QW + ++ST WC ++
Sbjct: 289 MLSVPAIFYRPKGREEESDQIREKF-----AVPESDHLTYLNVYLQWKNNNYSTIWCNDH 343
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
FI ++M++ R+VR QL ++ + M L S T+ +RK I A YF+ AKL G Y
Sbjct: 344 FIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYV 403
Query: 1238 TAKHNQTVMIHPNSSLFEE--LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKP 1295
+ +HP SSLF P +++YHELV TTKE+M+ VT ++ +WL E+ P +Y
Sbjct: 404 NIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 463
Query: 1296 RELEDST--NKKMPK 1308
++ S N++ K
Sbjct: 464 KQAGKSRQENRRRAK 478
Score = 213 (80.0 bits), Expect = 6.5e-43, Sum P(2) = 6.5e-43
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 161 QTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPIS 220
Q KIF P RK ++ATNIAETSLT+D I++VID G+CK FN R GM++L + PIS
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 221 KASANQRAGVITGFNPLSDFR 241
+A+ANQR+G P FR
Sbjct: 159 QANANQRSGRAGRTGPGQCFR 179
Score = 43 (20.2 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 636 IQALSLPG--NRDKGEEEMTEKQKKKLNIEET 665
+ LS+P R KG EE +++ ++K + E+
Sbjct: 287 VSMLSVPAIFYRPKGREEESDQIREKFAVPES 318
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 497 (180.0 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 109/344 (31%), Positives = 187/344 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+VID G ++ +N R +SL PIS++ A K F LY+ ++
Sbjct: 355 FVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKLFCLYSEEFASRDM 414
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ E+Q NL + VL +K + I L H DF++ P E+L+ ALE L L AL++ G+
Sbjct: 415 QPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGN 474
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
L++ G M+EFPLDP + K +LAS ++ CV+E++TIA+M++ + P+ A +
Sbjct: 475 LSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPRGAEEAALSC 534
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIG 1029
K F GDH L+NIY + D + +WC++ F+ +++ A +R +L+
Sbjct: 535 WKTFLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRTAEVIRAELLE 594
Query: 1030 LVQRVEMELVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS 1084
+++R+E+ + T+NI+KA+ +GYF IA+ + +G+Y H Q +HP S
Sbjct: 595 IIKRIELPYTEPAFGSKENTLNIKKALLSGYFMQIARDVDGAGNYLMLTHKQVAQLHPLS 654
Query: 1085 --SLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
S+ ++P WVL+H+ ++R +EI + +++AP YY
Sbjct: 655 CYSVARKMPEWVLFHKFSIANNNYIRTASEIAPELFMQLAPQYY 698
Score = 331 (121.6 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 75/238 (31%), Positives = 133/238 (55%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L SY V+I+D+ HER++ TD+L GL+KD++ R +LKL+I+S+
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSSPHL 221
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
K S ++ + P+ ++ + PV+ Y + + ++ + I +IH + GDI+VFL
Sbjct: 222 INKLSSYYGNVPLIQVKNKH-PVEAVYLSGAQKESFESILRLIFEIHHSGEKGDIVVFLA 280
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPT-------PPNARK 174
+++IE EI+ L + EL+++P+Y P + + +F P P R+
Sbjct: 281 CEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCPVYQRR 336
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
VVL + E+ + + + +VID G ++ +N R +SL PIS++ A R +++
Sbjct: 337 VVLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILS 394
Score = 240 (89.5 bits), Expect = 6.5e-46, Sum P(2) = 6.5e-46
Identities = 50/173 (28%), Positives = 92/173 (53%)
Query: 1152 GDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GDH L+NIY + D + +WC++ F+ +++ A +R +L+ +++R+E+
Sbjct: 543 GDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRTAEVIRAELLEIIKRIELP 602
Query: 1205 LVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS--SLFEEL 1257
+ T+NI+KA+ +GYF IA+ + +G+Y H Q +HP S S+ ++
Sbjct: 603 YTEPAFGSKENTLNIKKALLSGYFMQIARDVDGAGNYLMLTHKQVAQLHPLSCYSVARKM 662
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNKKM 1306
P WVL+H+ ++R +EI + +++AP YY P E +D + M
Sbjct: 663 PEWVLFHKFSIANNNYIRTASEIAPELFMQLAPQYYFSNLPPSESKDILQQVM 715
Score = 232 (86.7 bits), Expect = 4.5e-64, Sum P(2) = 4.5e-64
Identities = 48/137 (35%), Positives = 74/137 (54%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG--CTQP 723
++ LPI+ K ++ + Q++I+ G+ GK++Q+PQ+ E + D G CTQ
Sbjct: 59 REDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVVCTQV 118
Query: 724 XXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+EM V +G EVGY I FE+C + TI++Y TD L RE +S P L S
Sbjct: 119 HKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFLGS 178
Query: 784 YSVMIIDEAHPKVYVID 800
Y V+I+D+ H + D
Sbjct: 179 YGVIILDDIHERSMATD 195
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 428 (155.7 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 111/363 (30%), Positives = 176/363 (48%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
VID G+ + + ++ R+ ++ L + IS+ASANQ C RLY+ + + E
Sbjct: 363 VIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLNRPE 422
Query: 858 DNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGDL 917
T PEI R NL +L +KAL + D+ F F++PP + L L + AL+ G L
Sbjct: 423 F-TDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINALDAQGRL 481
Query: 918 TKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTAR 977
T+LGRR+A P+DP +G++LLA + C+ E+ I + LSV RP DK AD
Sbjct: 482 TELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPR-ERPADKAQAADQKH 540
Query: 978 KNFFMLGGDHLVLLNIYNQWADA--DFS----TQWCYENFIQHRSMKRARDVREQLIGLV 1031
F D + +L ++N + + S Q+C +NF+ M+ RD+ +Q++ +V
Sbjct: 541 ARFRHPDSDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQILEVV 600
Query: 1032 QRVEMELVSN--PTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEE 1089
+ E+ L N P + I +A+ G H+ Y + Q I P S LF+
Sbjct: 601 KG-ELGLRPNQVPADYGEIHRALLTGLLCHVGFRQDQNEYVGVR-GQKFQIFPGSFLFKT 658
Query: 1090 LPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1149
P W++ E V T++ + R V IE +W+ + H K E +K + R
Sbjct: 659 RPVWIISAEQVETSRVYARTVARIEPEWIEKCGAHLLKRHYYEPHWERKAARGAVFERTA 718
Query: 1150 LGG 1152
L G
Sbjct: 719 LYG 721
Score = 420 (152.9 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 98/238 (41%), Positives = 147/238 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E ++ L Y +I+DEAHER+L+ D L G +K ++ R DLKL+I+SAT+
Sbjct: 170 MTDGILLAETQTDRFLDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATI 229
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYY----TKAPEADYID-----ACVVSILQIHATQ 111
D ++FS FD+AP+ R+PGR +PV+I Y + E+D + A + ++ ++H +
Sbjct: 230 DPERFSRHFDNAPIVRVPGRTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELHR-E 288
Query: 112 PLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN 171
GDIL+FL+G+ EI E L+ + +LP+YS L Q KIF P
Sbjct: 289 NTGDILIFLSGEREIRDTAESLRKH------HPADCEVLPLYSRLTVSEQEKIF--KPHG 340
Query: 172 ARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
R++VLATN+AETSLT+ I VID G+ + + ++ R+ ++ L + IS+ASANQRAG
Sbjct: 341 RRRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAG 398
Score = 231 (86.4 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 54/137 (39%), Positives = 77/137 (56%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQP 723
E + LP+ + ++ +A+R +QV+I+ GETGSGKTTQ+P+ EAG + IG TQP
Sbjct: 69 EYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAG-RGIQGYIGHTQP 127
Query: 724 XXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+E+ LG VGY +RF D T ++IK MTDG L E ++ L
Sbjct: 128 RRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQ 187
Query: 784 YSVMIIDEAHPKVYVID 800
Y +I+DEAH + ID
Sbjct: 188 YDTLIVDEAHERSLNID 204
Score = 157 (60.3 bits), Expect = 6.4e-46, Sum P(2) = 6.4e-46
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 1172 QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSN--PTETVNIRKAITAGYFYHIAK 1229
Q+C +NF+ M+ RD+ +Q++ +V+ E+ L N P + I +A+ G H+
Sbjct: 574 QYCRDNFLSALRMREWRDIHQQILEVVKG-ELGLRPNQVPADYGEIHRALLTGLLCHVGF 632
Query: 1230 LSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVA 1289
Y + Q I P S LF+ P W++ E V T++ + R V IE +W+ +
Sbjct: 633 RQDQNEYVGVR-GQKFQIFPGSFLFKTRPVWIISAEQVETSRVYARTVARIEPEWIEKCG 691
Query: 1290 PHYYKPRELEDSTNKK 1305
H K E +K
Sbjct: 692 AHLLKRHYYEPHWERK 707
Score = 37 (18.1 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 596 HYEQRKWEDEQMSSAIF 612
HY + WE + A+F
Sbjct: 698 HYYEPHWERKAARGAVF 714
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 483 (175.1 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 110/349 (31%), Positives = 187/349 (53%)
Query: 792 AHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWA 851
+H +VID G ++ +N R SL + PIS++ A K F LYT
Sbjct: 350 SHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEF 409
Query: 852 YKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL 911
++ E+Q NL + VL +K + I L DF++ P E+L+ ALE L L AL
Sbjct: 410 ASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAAL 469
Query: 912 NHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
++ G+L++ G M+EFPLDP + K +LAS ++ CV+E++TIA+M++ + P
Sbjct: 470 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEE 529
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVR 1024
A T K F GDH L+N+YN + D ++ WC++ F+ +++ A +R
Sbjct: 530 AAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIR 589
Query: 1025 EQLIGLVQRVEM---ELVSNPTET-VNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVM 1079
+L+ +++R+E+ E E +NI+KA+ +GYF IA+ + SG+Y H Q
Sbjct: 590 AELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQ 649
Query: 1080 IHPNSS--LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
+HP SS + +++P WVL+H+ + ++R + + + +++ P YY
Sbjct: 650 LHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
Score = 345 (126.5 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 77/242 (31%), Positives = 134/242 (55%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L SY V+I+D+ HER+L TD+L GL+KD++ R +LKL+++ + L
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLL 221
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
K S ++ D PV + + PV++ Y + D ++ + I +IH + GD++VFL
Sbjct: 222 TSKLSSYYGDVPVIEVRNKH-PVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLA 280
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA-------RK 174
+++IE E++ L + +L+++P+Y P + + +F P R+
Sbjct: 281 CEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRR 336
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGF 234
VVL T+ E+ + + +VID G ++ +N R SL + PIS++ A R ++ G
Sbjct: 337 VVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL-GS 395
Query: 235 NP 236
+P
Sbjct: 396 SP 397
Score = 233 (87.1 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 47/137 (34%), Positives = 76/137 (55%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG--CTQP 723
++ LPI+ K ++++ +QV+++ G++ GK++Q+PQ+ E + G CTQ
Sbjct: 59 REELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQA 118
Query: 724 XXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+EM V +G EVGY I FE+C + TI++Y TD L RE +S P L S
Sbjct: 119 HKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGS 178
Query: 784 YSVMIIDEAHPKVYVID 800
Y V+I+D+ H + D
Sbjct: 179 YGVIILDDVHERSLATD 195
Score = 229 (85.7 bits), Expect = 2.6e-46, Sum P(2) = 2.6e-46
Identities = 45/156 (28%), Positives = 87/156 (55%)
Query: 1152 GDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIGLVQRVEM- 1203
GDH L+N+YN + D ++ WC++ F+ +++ A +R +L+ +++R+E+
Sbjct: 543 GDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAELLEIIKRIELP 602
Query: 1204 --ELVSNPTET-VNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNSS--LFEEL 1257
E E +NI+KA+ +GYF IA+ + SG+Y H Q +HP SS + +++
Sbjct: 603 YAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKKM 662
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
P WVL+H+ + ++R + + + +++ P YY
Sbjct: 663 PEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 439 (159.6 bits), Expect = 5.4e-73, Sum P(3) = 5.4e-73
Identities = 98/234 (41%), Positives = 148/234 (63%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E S+ L Y +IIDEAHER+L+ D + G +K I++ R DLK++I+SAT+
Sbjct: 172 MTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATI 231
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYY---TKAPEADY--IDACVVSILQIHATQPLGD 115
D ++FS+ F++AP+ + GR +PV+ Y + EAD I+ ++ ++ A + LGD
Sbjct: 232 DVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDELVA-EGLGD 290
Query: 116 ILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKV 175
IL+F+ G+ EI E L R ++ ILP+Y+ L Q+K+F + R++
Sbjct: 291 ILIFMNGEREIRDTAEQLNRR------NYRDTEILPLYARLSYGEQSKVF--SSHTGRRI 342
Query: 176 VLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
VLATN+AETSLT+ I YVIDPG + + ++ RT ++ L + PIS+ASANQR G
Sbjct: 343 VLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQG 396
Score = 403 (146.9 bits), Expect = 5.4e-73, Sum P(3) = 5.4e-73
Identities = 105/365 (28%), Positives = 180/365 (49%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPG + + ++ RT ++ L + PIS+ASANQ C RLY + +
Sbjct: 360 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNR- 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETL---VLALEQLYALGALNH 913
T PEI R NL + +L + A+G+ D+ F F++PP + L LE+L A+
Sbjct: 419 PAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKG 478
Query: 914 HGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+ LT LGR++++ P+DP + +M++ S + C+ E++ IAS LS+ RP DK +
Sbjct: 479 NIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR-ERPMDKKQAS 537
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADAD---FSTQW---CYENFIQHRSMKRARDVREQL 1027
D A + F D + +N++ + ++Q+ C + ++ + ++ +D+ QL
Sbjct: 538 DEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQL 597
Query: 1028 IGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF 1087
V ++ L P + +A+ +G HI + Y A+ N+ + P S L
Sbjct: 598 KQAVHDLKWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLGAR-NRKFFVFPGSPLA 656
Query: 1088 EELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1147
++ P+W++ EL+ T+K F R +IE +WL +A H K LE K +
Sbjct: 657 KKGPKWIMAAELMETSKLFARCCAKIEPEWLEPLAAHLIKKNHLEPHFEAKQGSVIAFEN 716
Query: 1148 AELGG 1152
L G
Sbjct: 717 QVLYG 721
Score = 241 (89.9 bits), Expect = 4.4e-52, Sum P(3) = 4.4e-52
Identities = 61/163 (37%), Positives = 86/163 (52%)
Query: 646 DKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY 705
+K E+ + K + ++N + +LP+ ++D+ A+ +QV+II GETGSGKTTQ+P+
Sbjct: 58 EKVEQRL--KARPRINYPD---NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKI 112
Query: 706 LHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKY 765
E G IG TQP EE+ LG VG+ +RF D + IK
Sbjct: 113 CLELGLGSRGF-IGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKL 171
Query: 766 MTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID--PGFCKQ 806
MTDG L E S+ L Y +IIDEAH + ID G+ KQ
Sbjct: 172 MTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQ 214
Score = 148 (57.2 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 1174 CYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKS 1233
C + ++ + ++ +D+ QL V ++ L P + +A+ +G HI +
Sbjct: 577 CRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNDTPANYDALHRALLSGLLSHIGFKDNN 636
Query: 1234 GSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
Y A+ N+ + P S L ++ P+W++ EL+ T+K F R +IE +WL +A H
Sbjct: 637 NEYLGAR-NRKFFVFPGSPLAKKGPKWIMAAELMETSKLFARCCAKIEPEWLEPLAAHLI 695
Query: 1294 KPRELE 1299
K LE
Sbjct: 696 KKNHLE 701
Score = 45 (20.9 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 19/83 (22%), Positives = 28/83 (33%)
Query: 456 DEFSERLKNRD--KNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRRKYL 513
DE ER N D K + R D + P + + R +
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 514 EKRKEDKVAELEADILDDEYLFS 536
E R V + EAD+ E +F+
Sbjct: 256 ETRYRPLVQDTEADLDQIEGIFA 278
Score = 43 (20.2 bits), Expect = 5.4e-73, Sum P(3) = 5.4e-73
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 1172 QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLS 1231
Q ++ F++ KR DV L + R++ +L +PT ++IT A+L+
Sbjct: 1186 QLVFKGFVEACGWKRLADVARYLKAIETRID-KLPVDPTRDRLHMQSITKVQDALAAQLA 1244
Query: 1232 K 1232
K
Sbjct: 1245 K 1245
Score = 43 (20.2 bits), Expect = 2.8e-35, Sum P(3) = 2.8e-35
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 1005 QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLS 1064
Q ++ F++ KR DV L + R++ +L +PT ++IT A+L+
Sbjct: 1186 QLVFKGFVEACGWKRLADVARYLKAIETRID-KLPVDPTRDRLHMQSITKVQDALAAQLA 1244
Query: 1065 K 1065
K
Sbjct: 1245 K 1245
Score = 42 (19.8 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 617 KDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQ 676
K + E + D Q DF+ ++L + + ++E++ Q +K +E L + + Q
Sbjct: 533 KKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREW-Q 591
Query: 677 DL 678
DL
Sbjct: 592 DL 593
Score = 39 (18.8 bits), Expect = 5.6e-35, Sum P(3) = 5.6e-35
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 627 LLLDNQIDFIQALSLPGNRDKG 648
LL+ D I AL P KG
Sbjct: 829 LLMQRSADHISALDFPDTWHKG 850
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 439 (159.6 bits), Expect = 5.4e-73, Sum P(3) = 5.4e-73
Identities = 98/234 (41%), Positives = 148/234 (63%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E S+ L Y +IIDEAHER+L+ D + G +K I++ R DLK++I+SAT+
Sbjct: 172 MTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATI 231
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYY---TKAPEADY--IDACVVSILQIHATQPLGD 115
D ++FS+ F++AP+ + GR +PV+ Y + EAD I+ ++ ++ A + LGD
Sbjct: 232 DVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDELVA-EGLGD 290
Query: 116 ILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKV 175
IL+F+ G+ EI E L R ++ ILP+Y+ L Q+K+F + R++
Sbjct: 291 ILIFMNGEREIRDTAEQLNRR------NYRDTEILPLYARLSYGEQSKVF--SSHTGRRI 342
Query: 176 VLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
VLATN+AETSLT+ I YVIDPG + + ++ RT ++ L + PIS+ASANQR G
Sbjct: 343 VLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQG 396
Score = 403 (146.9 bits), Expect = 5.4e-73, Sum P(3) = 5.4e-73
Identities = 105/365 (28%), Positives = 180/365 (49%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPG + + ++ RT ++ L + PIS+ASANQ C RLY + +
Sbjct: 360 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNR- 418
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETL---VLALEQLYALGALNH 913
T PEI R NL + +L + A+G+ D+ F F++PP + L LE+L A+
Sbjct: 419 PAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKG 478
Query: 914 HGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+ LT LGR++++ P+DP + +M++ S + C+ E++ IAS LS+ RP DK +
Sbjct: 479 NIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR-ERPMDKKQAS 537
Query: 974 DTARKNFFMLGGDHLVLLNIYNQWADAD---FSTQW---CYENFIQHRSMKRARDVREQL 1027
D A + F D + +N++ + ++Q+ C + ++ + ++ +D+ QL
Sbjct: 538 DEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQL 597
Query: 1028 IGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF 1087
V ++ L P + +A+ +G HI + Y A+ N+ + P S L
Sbjct: 598 KQAVHDLKWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLGAR-NRKFFVFPGSPLA 656
Query: 1088 EELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1147
++ P+W++ EL+ T+K F R +IE +WL +A H K LE K +
Sbjct: 657 KKGPKWIMAAELMETSKLFARCCAKIEPEWLEPLAAHLIKKNHLEPHFEAKQGSVIAFEN 716
Query: 1148 AELGG 1152
L G
Sbjct: 717 QVLYG 721
Score = 241 (89.9 bits), Expect = 4.4e-52, Sum P(3) = 4.4e-52
Identities = 61/163 (37%), Positives = 86/163 (52%)
Query: 646 DKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY 705
+K E+ + K + ++N + +LP+ ++D+ A+ +QV+II GETGSGKTTQ+P+
Sbjct: 58 EKVEQRL--KARPRINYPD---NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKI 112
Query: 706 LHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKY 765
E G IG TQP EE+ LG VG+ +RF D + IK
Sbjct: 113 CLELGLGSRGF-IGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKL 171
Query: 766 MTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID--PGFCKQ 806
MTDG L E S+ L Y +IIDEAH + ID G+ KQ
Sbjct: 172 MTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQ 214
Score = 148 (57.2 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 1174 CYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKS 1233
C + ++ + ++ +D+ QL V ++ L P + +A+ +G HI +
Sbjct: 577 CRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNDTPANYDALHRALLSGLLSHIGFKDNN 636
Query: 1234 GSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
Y A+ N+ + P S L ++ P+W++ EL+ T+K F R +IE +WL +A H
Sbjct: 637 NEYLGAR-NRKFFVFPGSPLAKKGPKWIMAAELMETSKLFARCCAKIEPEWLEPLAAHLI 695
Query: 1294 KPRELE 1299
K LE
Sbjct: 696 KKNHLE 701
Score = 45 (20.9 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 19/83 (22%), Positives = 28/83 (33%)
Query: 456 DEFSERLKNRD--KNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRRKYL 513
DE ER N D K + R D + P + + R +
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 514 EKRKEDKVAELEADILDDEYLFS 536
E R V + EAD+ E +F+
Sbjct: 256 ETRYRPLVQDTEADLDQIEGIFA 278
Score = 43 (20.2 bits), Expect = 5.4e-73, Sum P(3) = 5.4e-73
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 1172 QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLS 1231
Q ++ F++ KR DV L + R++ +L +PT ++IT A+L+
Sbjct: 1186 QLVFKGFVEACGWKRLADVARYLKAIETRID-KLPVDPTRDRLHMQSITKVQDALAAQLA 1244
Query: 1232 K 1232
K
Sbjct: 1245 K 1245
Score = 43 (20.2 bits), Expect = 2.8e-35, Sum P(3) = 2.8e-35
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 1005 QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLS 1064
Q ++ F++ KR DV L + R++ +L +PT ++IT A+L+
Sbjct: 1186 QLVFKGFVEACGWKRLADVARYLKAIETRID-KLPVDPTRDRLHMQSITKVQDALAAQLA 1244
Query: 1065 K 1065
K
Sbjct: 1245 K 1245
Score = 42 (19.8 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 617 KDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQ 676
K + E + D Q DF+ ++L + + ++E++ Q +K +E L + + Q
Sbjct: 533 KKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREW-Q 591
Query: 677 DL 678
DL
Sbjct: 592 DL 593
Score = 39 (18.8 bits), Expect = 5.6e-35, Sum P(3) = 5.6e-35
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 627 LLLDNQIDFIQALSLPGNRDKG 648
LL+ D I AL P KG
Sbjct: 829 LLMQRSADHISALDFPDTWHKG 850
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 480 (174.0 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 111/349 (31%), Positives = 186/349 (53%)
Query: 792 AHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWA 851
+H +VID G ++ +N R SL + PIS++ A K F LYT
Sbjct: 357 SHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEF 416
Query: 852 YKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL 911
++ E+Q NL + VL +K + I L DF++ P E+L+ ALE L L AL
Sbjct: 417 ASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAAL 476
Query: 912 NHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
++ G+L++ G M+EFPLDP + K +LAS ++ CV+E++TIA+M++ + P
Sbjct: 477 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEE 536
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWADADFSTQ-------WCYENFIQHRSMKRARDVR 1024
A T K F GDH L+NIYN + D ++ WC+ F+ +++ A +R
Sbjct: 537 AAVTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRMADVIR 596
Query: 1025 EQLIGLVQRVEM---ELVSNPTET-VNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVM 1079
+L+ +++R+E+ E E +NI+KA+ +GYF IA+ + SG+Y H Q
Sbjct: 597 AELLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQ 656
Query: 1080 IHPNSS--LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
+HP SS + +++P WVL+H+ + ++R + + + +++ P YY
Sbjct: 657 LHPLSSYAITKKMPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYY 705
Score = 336 (123.3 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 77/242 (31%), Positives = 134/242 (55%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L SY V+I+D+ HER+L TD+L GL+KD++ R +LKL+I+ +
Sbjct: 169 TDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFL 228
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
+ S ++ + P+ + + PV++ Y + D ++ V I +IH + GD++VFL
Sbjct: 229 ISRLSSYYGNVPLLEVRNKH-PVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVVFLA 287
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPP-------NARK 174
+++IE EI+ L + EL+++P+Y P + + +F P + R+
Sbjct: 288 CEQDIEKTYEIVCQEGSNLNPDVGELVVIPLY---PKE-KCSLFRPVDETEKRCQASQRR 343
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGF 234
VVL T+ E+ + + +VID G ++ +N R SL + PIS++ A R ++ G
Sbjct: 344 VVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL-GS 402
Query: 235 NP 236
+P
Sbjct: 403 SP 404
Score = 231 (86.4 bits), Expect = 7.7e-62, Sum P(2) = 7.7e-62
Identities = 47/137 (34%), Positives = 76/137 (55%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG--CTQP 723
++ LPI+ K ++++ +QV+++ G++ GK++Q+PQ+ E + G CTQ
Sbjct: 66 REELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQV 125
Query: 724 XXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+EM V +G EVGY I FE+C + TI++Y TD L RE +S P L S
Sbjct: 126 HKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGS 185
Query: 784 YSVMIIDEAHPKVYVID 800
Y V+I+D+ H + D
Sbjct: 186 YGVIILDDVHERSLATD 202
Score = 227 (85.0 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 46/156 (29%), Positives = 86/156 (55%)
Query: 1152 GDHLVLLNIYNQWADADFSTQ-------WCYENFIQHRSMKRARDVREQLIGLVQRVEM- 1203
GDH L+NIYN + D ++ WC+ F+ +++ A +R +L+ +++R+E+
Sbjct: 550 GDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRMADVIRAELLEIIKRIELP 609
Query: 1204 --ELVSNPTET-VNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNSS--LFEEL 1257
E E +NI+KA+ +GYF IA+ + SG+Y H Q +HP SS + +++
Sbjct: 610 YAEPAFGSQENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYAITKKM 669
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
P WVL+H+ + ++R + + + +++ P YY
Sbjct: 670 PEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYY 705
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 424 (154.3 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 92/236 (38%), Positives = 144/236 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E ++ L Y +IIDEAHER+L+ D + G +K ++ R DLK++I+SAT+
Sbjct: 183 MTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATI 242
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYT-------KAPEADYIDACVVSILQIHATQPL 113
D ++FS+ F +AP+ + GR +PV++ Y + D ++ ++ ++ + L
Sbjct: 243 DPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGL 301
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
GDIL+F+ G+ EI + L R +++ I+P+Y+ L Q KIF P R
Sbjct: 302 GDILIFMNGEREIRDTADALSKR------NLRDTEIVPLYARLSAGEQNKIFQPHA--GR 353
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
++VLATN+AETSLT+ I YVIDPG + + ++ RT ++ L + PIS+ASANQR G
Sbjct: 354 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 409
Score = 422 (153.6 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 119/378 (31%), Positives = 186/378 (49%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPG + + ++ RT ++ L + PIS+ASANQ C RLY+ +
Sbjct: 373 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRP 432
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHH-G 915
E T PEI R NL + +L + ALG+ D+ F F++ P + + L LGA+N
Sbjct: 433 EF-TDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIK 491
Query: 916 D----LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
D LT+ G+++A P+DP + +M+L + K C++E++ IAS LS+ RP DK
Sbjct: 492 DPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPR-ERPSDKQQ 550
Query: 972 HADTARKNFFMLGGDHLVLLNIYN---QWADADFSTQW---CYENFIQHRSMKRARDVRE 1025
AD + F D L L+N+++ Q A S Q+ C +++ + ++ +DV
Sbjct: 551 SADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYT 610
Query: 1026 QLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIA-KLSKSGSYKTAKHNQTVMIHPNS 1084
QL + + +L P + AI G HI K + Y A+ N I P S
Sbjct: 611 QLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGAR-NARFNIFPAS 669
Query: 1085 SLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLG 1144
LF++ P+WV+ ELV T+K + R V +IE W+ +A H K E +KK +
Sbjct: 670 GLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHWSKKNAAVMA 729
Query: 1145 KSRAELGGDHLVLLNIYN 1162
+ L G +V + N
Sbjct: 730 YEKVMLYGIPIVPKRLVN 747
Score = 264 (98.0 bits), Expect = 6.5e-56, Sum P(3) = 6.5e-56
Identities = 64/157 (40%), Positives = 88/157 (56%)
Query: 652 MTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF 711
+ E++K+++ E LP+ + D+ A+ HQV+I+ GETGSGKTTQ+P+ E G
Sbjct: 70 VVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGR 129
Query: 712 TKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
K + IG TQP EEM +LG VGY +RF D S++T IK MTDG L
Sbjct: 130 GKYGL-IGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGIL 188
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVID--PGFCKQ 806
E ++ L Y +IIDEAH + ID G+ KQ
Sbjct: 189 LAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQ 225
Score = 152 (58.6 bits), Expect = 8.3e-46, Sum P(2) = 8.3e-46
Identities = 48/160 (30%), Positives = 76/160 (47%)
Query: 1153 DHLVLLNIYN---QWADADFSTQW---CYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1206
D L L+N+++ Q A S Q+ C +++ + ++ +DV QL + + +L
Sbjct: 565 DFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLN 624
Query: 1207 SNPTETVNIRKAITAGYFYHIA-KLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHE 1265
P + AI G HI K + Y A+ N I P S LF++ P+WV+ E
Sbjct: 625 DEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGAR-NARFNIFPASGLFKKQPKWVMSAE 683
Query: 1266 LVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1305
LV T+K + R V +IE W+ +A H K E +KK
Sbjct: 684 LVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHWSKK 723
Score = 37 (18.1 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1285 LLEVAPHYYK---P---RELEDSTNKKMPKTLGKS 1313
L +V PH + P EL S K +PKTL K+
Sbjct: 894 LNQVEPHGFDWQIPGLRHELVVSLIKSLPKTLRKN 928
Score = 37 (18.1 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 922 RRMAEFPLDPMMGKM-LLASE----KYK 944
RRM + P+DP ++ +L E KYK
Sbjct: 1229 RRMEKLPVDPNKDRLHMLKIESVANKYK 1256
Score = 37 (18.1 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1118 LLEVAPHYYK---P---RELEDSTNKKMPKTLGKS 1146
L +V PH + P EL S K +PKTL K+
Sbjct: 894 LNQVEPHGFDWQIPGLRHELVVSLIKSLPKTLRKN 928
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 424 (154.3 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 92/236 (38%), Positives = 144/236 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E ++ L Y +IIDEAHER+L+ D + G +K ++ R DLK++I+SAT+
Sbjct: 183 MTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATI 242
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYT-------KAPEADYIDACVVSILQIHATQPL 113
D ++FS+ F +AP+ + GR +PV++ Y + D ++ ++ ++ + L
Sbjct: 243 DPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGL 301
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
GDIL+F+ G+ EI + L R +++ I+P+Y+ L Q KIF P R
Sbjct: 302 GDILIFMNGEREIRDTADALSKR------NLRDTEIVPLYARLSAGEQNKIFQPHA--GR 353
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
++VLATN+AETSLT+ I YVIDPG + + ++ RT ++ L + PIS+ASANQR G
Sbjct: 354 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 409
Score = 422 (153.6 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 119/378 (31%), Positives = 186/378 (49%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPG + + ++ RT ++ L + PIS+ASANQ C RLY+ +
Sbjct: 373 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRP 432
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHH-G 915
E T PEI R NL + +L + ALG+ D+ F F++ P + + L LGA+N
Sbjct: 433 EF-TDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIK 491
Query: 916 D----LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
D LT+ G+++A P+DP + +M+L + K C++E++ IAS LS+ RP DK
Sbjct: 492 DPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPR-ERPSDKQQ 550
Query: 972 HADTARKNFFMLGGDHLVLLNIYN---QWADADFSTQW---CYENFIQHRSMKRARDVRE 1025
AD + F D L L+N+++ Q A S Q+ C +++ + ++ +DV
Sbjct: 551 SADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYT 610
Query: 1026 QLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIA-KLSKSGSYKTAKHNQTVMIHPNS 1084
QL + + +L P + AI G HI K + Y A+ N I P S
Sbjct: 611 QLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGAR-NARFNIFPAS 669
Query: 1085 SLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLG 1144
LF++ P+WV+ ELV T+K + R V +IE W+ +A H K E +KK +
Sbjct: 670 GLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHWSKKNAAVMA 729
Query: 1145 KSRAELGGDHLVLLNIYN 1162
+ L G +V + N
Sbjct: 730 YEKVMLYGIPIVPKRLVN 747
Score = 264 (98.0 bits), Expect = 6.5e-56, Sum P(3) = 6.5e-56
Identities = 64/157 (40%), Positives = 88/157 (56%)
Query: 652 MTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF 711
+ E++K+++ E LP+ + D+ A+ HQV+I+ GETGSGKTTQ+P+ E G
Sbjct: 70 VVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGR 129
Query: 712 TKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
K + IG TQP EEM +LG VGY +RF D S++T IK MTDG L
Sbjct: 130 GKYGL-IGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGIL 188
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVID--PGFCKQ 806
E ++ L Y +IIDEAH + ID G+ KQ
Sbjct: 189 LAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQ 225
Score = 152 (58.6 bits), Expect = 8.3e-46, Sum P(2) = 8.3e-46
Identities = 48/160 (30%), Positives = 76/160 (47%)
Query: 1153 DHLVLLNIYN---QWADADFSTQW---CYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1206
D L L+N+++ Q A S Q+ C +++ + ++ +DV QL + + +L
Sbjct: 565 DFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLN 624
Query: 1207 SNPTETVNIRKAITAGYFYHIA-KLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHE 1265
P + AI G HI K + Y A+ N I P S LF++ P+WV+ E
Sbjct: 625 DEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGAR-NARFNIFPASGLFKKQPKWVMSAE 683
Query: 1266 LVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1305
LV T+K + R V +IE W+ +A H K E +KK
Sbjct: 684 LVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHWSKK 723
Score = 37 (18.1 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1285 LLEVAPHYYK---P---RELEDSTNKKMPKTLGKS 1313
L +V PH + P EL S K +PKTL K+
Sbjct: 894 LNQVEPHGFDWQIPGLRHELVVSLIKSLPKTLRKN 928
Score = 37 (18.1 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 922 RRMAEFPLDPMMGKM-LLASE----KYK 944
RRM + P+DP ++ +L E KYK
Sbjct: 1229 RRMEKLPVDPNKDRLHMLKIESVANKYK 1256
Score = 37 (18.1 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1118 LLEVAPHYYK---P---RELEDSTNKKMPKTLGKS 1146
L +V PH + P EL S K +PKTL K+
Sbjct: 894 LNQVEPHGFDWQIPGLRHELVVSLIKSLPKTLRKN 928
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 487 (176.5 bits), Expect = 1.9e-72, Sum P(2) = 1.9e-72
Identities = 110/344 (31%), Positives = 186/344 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+VID G ++ +N R SL + PIS++ A K F LYT ++
Sbjct: 354 FVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDM 413
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E+Q NL + VL +K + I L H DF++ P E+L+ ALE L L AL++ G+
Sbjct: 414 TPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGN 473
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
L++ G M+EFPLDP + K +LAS ++ CV+E++TIA+M++ + P A T
Sbjct: 474 LSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTC 533
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIG 1029
K F GDH L++IY + D ++ +WC + F+ +++ A +R +L+
Sbjct: 534 WKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLE 593
Query: 1030 LVQRVEMELVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS 1084
+++R+E+ + T+NI+KA+ +GYF IA+ + SG+Y H Q +HP S
Sbjct: 594 IIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLS 653
Query: 1085 --SLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
S+ +++P WVL+H+ + ++R +EI + +++ P YY
Sbjct: 654 GYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
Score = 323 (118.8 bits), Expect = 1.9e-72, Sum P(2) = 1.9e-72
Identities = 76/238 (31%), Positives = 132/238 (55%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L SY V+I+D+ HER++ TD+L GL+KD++ R +LKL+I+S+
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHL 221
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
K + ++ + PV + + PV++ Y + D ++ + I +IH + GDI+VFL
Sbjct: 222 ISKLNSYYGNVPVIEVKNKH-PVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLA 280
Query: 122 GQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA-------R 173
+++IE C + Q L + EL+++P+Y P + + +F P R
Sbjct: 281 CEQDIEKVCETVYQGS--NLNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQR 334
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVI 231
+VVL T+ E + +++ +VID G ++ +N R SL + PIS++ A R ++
Sbjct: 335 RVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQIL 392
Score = 230 (86.0 bits), Expect = 5.6e-44, Sum P(2) = 5.6e-44
Identities = 45/156 (28%), Positives = 87/156 (55%)
Query: 1152 GDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GDH L++IY + D ++ +WC + F+ +++ A +R +L+ +++R+E+
Sbjct: 542 GDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIELP 601
Query: 1205 LVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS--SLFEEL 1257
+ T+NI+KA+ +GYF IA+ + SG+Y H Q +HP S S+ +++
Sbjct: 602 YAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSGYSITKKM 661
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
P WVL+H+ + ++R +EI + +++ P YY
Sbjct: 662 PEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
Score = 226 (84.6 bits), Expect = 3.1e-62, Sum P(2) = 3.1e-62
Identities = 47/137 (34%), Positives = 73/137 (53%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG--CTQP 723
++ LPI+ K ++ + +Q++I+ G+ GK+ Q+PQ+ E + G CTQ
Sbjct: 59 REDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVICTQV 118
Query: 724 XXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+EM V +G EVGY I FE+C + TI++Y TD L RE +S P L S
Sbjct: 119 HKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFLGS 178
Query: 784 YSVMIIDEAHPKVYVID 800
Y V+I+D+ H + D
Sbjct: 179 YGVIILDDIHERSIATD 195
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 484 (175.4 bits), Expect = 4.5e-72, Sum P(2) = 4.5e-72
Identities = 112/344 (32%), Positives = 185/344 (53%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+VID G ++ +N R SL PIS++ A K F LY+ ++
Sbjct: 355 FVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKLFCLYSEEFASKDM 414
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E+Q NL + VL +K + I L H DF++ P E+L+ ALE L L AL++ G+
Sbjct: 415 RPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGN 474
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
L++ G M+EFPLDP + K +LAS ++ CVEE++TIA+M++ P A T
Sbjct: 475 LSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAAMVTAPNCFSNLPHGAEEAALTC 534
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIG 1029
K F GDH L+NIY + D ++ +WC++ F+ +++ A +R +L+
Sbjct: 535 WKTFLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRMADVIRAELLE 594
Query: 1030 LVQRVEMELVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS 1084
+V+R+E+ + +NI+KA+ +GYF IA+ + SG+Y H Q +HP S
Sbjct: 595 IVKRIELPCAEPAFGSKENALNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLS 654
Query: 1085 S--LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
S + +++P WVL+H+ + ++R +EI + +++AP YY
Sbjct: 655 SYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLAPPYY 698
Score = 323 (118.8 bits), Expect = 4.5e-72, Sum P(2) = 4.5e-72
Identities = 73/237 (30%), Positives = 132/237 (55%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L +Y V+I+D+ HER++ TD+L GL+KD++ R +LKL+I+S+
Sbjct: 162 TDDMLQREMMSSPFLGNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHL 221
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
K S ++ + P+ + ++ PV++ Y + + +++ + I +IH + GDI+VFL
Sbjct: 222 ISKLSSYYGNVPLIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDIVVFLA 280
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA-------RK 174
+++IE EI+ L + EL+++P+Y P + + +F P R+
Sbjct: 281 CEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCQVYQRR 336
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVI 231
VVL + E+ + + + +VID G ++ +N R SL PIS++ A R ++
Sbjct: 337 VVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQIL 393
Score = 234 (87.4 bits), Expect = 2.1e-44, Sum P(2) = 2.1e-44
Identities = 51/173 (29%), Positives = 94/173 (54%)
Query: 1152 GDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GDH L+NIY + D ++ +WC++ F+ +++ A +R +L+ +V+R+E+
Sbjct: 543 GDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRMADVIRAELLEIVKRIELP 602
Query: 1205 LVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNSS--LFEEL 1257
+ +NI+KA+ +GYF IA+ + SG+Y H Q +HP SS + +++
Sbjct: 603 CAEPAFGSKENALNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKKM 662
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNKKM 1306
P WVL+H+ + ++R +EI + +++AP YY P E +D + M
Sbjct: 663 PEWVLFHKFSISENNYIRITSEISPELFMQLAPPYYFSNLPPSESKDILRQVM 715
Score = 226 (84.6 bits), Expect = 7.5e-62, Sum P(2) = 7.5e-62
Identities = 47/137 (34%), Positives = 74/137 (54%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG--CTQP 723
++ LPI+ K ++ + +Q++I+ G+ GK++Q+PQ+ E + G CTQ
Sbjct: 59 REDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVVCTQV 118
Query: 724 XXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+EM V +G EVGY I FE+C S TI++Y TD L RE +S P L +
Sbjct: 119 HKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREMMSSPFLGN 178
Query: 784 YSVMIIDEAHPKVYVID 800
Y V+I+D+ H + D
Sbjct: 179 YGVIILDDIHERSIATD 195
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 420 (152.9 bits), Expect = 7.8e-72, Sum P(3) = 7.8e-72
Identities = 93/235 (39%), Positives = 145/235 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E + L Y +IIDEAHER+L+ D L G +K+++ R DLK++I+SAT+
Sbjct: 173 MTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATI 232
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKA------PEADYIDACVVSILQIHATQPLG 114
D ++FS F++AP+ + GR +PV++ Y E D + A ++ ++ + + G
Sbjct: 233 DPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHG 291
Query: 115 DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
DIL+F++G+ EI D + +L + E ILP+Y+ L Q ++F + R+
Sbjct: 292 DILIFMSGEREIRDT----ADALNKLNLRHTE--ILPLYARLSNSEQNRVF--QSHSGRR 343
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
+VLATN+AETSLT+ I YVIDPG + + ++ RT ++ L + PIS+ASANQR G
Sbjct: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398
Score = 417 (151.9 bits), Expect = 7.8e-72, Sum P(3) = 7.8e-72
Identities = 119/421 (28%), Positives = 196/421 (46%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPG + + ++ RT ++ L + PIS+ASANQ C RLY+ +
Sbjct: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E T PEI R NL + +L + ALG+ D+ F F++ P + + L LGA+
Sbjct: 422 EF-TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480
Query: 917 -----LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKII 971
LT LGR++++ P+DP + +M+L ++K+ CV E + I S LS+ RP DK
Sbjct: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR-ERPMDKQQ 539
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWADAD--FST----QWCYENFIQHRSMKRARDVRE 1025
+D + F D L +N++N + S+ + C +++ + ++ +D+
Sbjct: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599
Query: 1026 QLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSS 1085
QL +V+ + + + S P E I A+ G HI T N I P S
Sbjct: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1145
LF++ P+WV+ ELV T++ + R I+ +W+ VA H K E + +
Sbjct: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719
Query: 1146 SRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLI--GLVQRVEM 1203
+ + G +V N ++ D + C E FI+H ++ R L R E+
Sbjct: 720 EKVTVYGLPIVAARKVN-YSQIDPAL--CRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776
Query: 1204 E 1204
E
Sbjct: 777 E 777
Score = 268 (99.4 bits), Expect = 2.2e-55, Sum P(4) = 2.2e-55
Identities = 60/141 (42%), Positives = 82/141 (58%)
Query: 668 SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXX 727
+LP+ KQD+++A+RDHQV+I+ GETGSGKTTQ+P+ E G K IG TQP
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-RGIKGLIGHTQPRRLA 134
Query: 728 XXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVM 787
EE+ + G +GY +RF D S+ T++K MTDG L E + L Y +
Sbjct: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194
Query: 788 IIDEAHPKVYVID--PGFCKQ 806
IIDEAH + ID G+ K+
Sbjct: 195 IIDEAHERSLNIDFLLGYLKE 215
Score = 148 (57.2 bits), Expect = 5.8e-45, Sum P(2) = 5.8e-45
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 1153 DHLVLLNIYNQWADAD--FST----QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1206
D L +N++N + S+ + C +++ + ++ +D+ QL +V+ + + +
Sbjct: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613
Query: 1207 SNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHEL 1266
S P E I A+ G HI T N I P S LF++ P+WV+ EL
Sbjct: 614 SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAEL 673
Query: 1267 VFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
V T++ + R I+ +W+ VA H K
Sbjct: 674 VETSRLWGRIAARIDPEWVEPVAQHLIK 701
Score = 42 (19.8 bits), Expect = 2.2e-55, Sum P(4) = 2.2e-55
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 247 LGEEVLRGCAHVLGEEVLRPEVSQP 271
+ +E+ + VL E RPE++ P
Sbjct: 50 MAKEIDQAAGKVLLREAARPEITYP 74
Score = 38 (18.4 bits), Expect = 7.8e-72, Sum P(3) = 7.8e-72
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 1175 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP 1209
Y F+ KR D L + +R+E +L +P
Sbjct: 1194 YRGFVTGNGFKRLGDTLRYLQAIEKRLE-KLAVDP 1227
Score = 38 (18.4 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP 1042
Y F+ KR D L + +R+E +L +P
Sbjct: 1194 YRGFVTGNGFKRLGDTLRYLQAIEKRLE-KLAVDP 1227
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 428 (155.7 bits), Expect = 2.7e-71, Sum P(3) = 2.7e-71
Identities = 113/341 (33%), Positives = 175/341 (51%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVID G K + + G+ESL V ISK+SA Q KC+RLYT YK E+
Sbjct: 459 YVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYK-EM 517
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
D +PEI R N+ A L++ A G++DL+ F +D P + A+ QL LGA++ G
Sbjct: 518 RDADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGA 577
Query: 917 LTKLGRRMAEFPLDPMMGKMLLA--SEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
+T+LG++MA P+ +G++LLA S Y C+ E++ I S +S IF++ + + +
Sbjct: 578 ITELGKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREE 637
Query: 975 TA--RKNFFMLGGDHLVLLNIYNQW-ADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
R+ GD +V L + A+ T+WC + I R+M++A ++R QL L
Sbjct: 638 VEEYRRELRRREGDLMVYLTTMQMYTAENSDRTEWCKKRKINLRTMRQALNIRRQLRSLC 697
Query: 1032 QRVEM--E---------LVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMI 1080
M E + +P I K G+ A L+ SY T++ V I
Sbjct: 698 VSEGMLTEKPPPDPQPFVPLSPEAAETITKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAI 757
Query: 1081 HPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEV 1121
HP+SSL + +++ E VFT K + ++V I+S W+ EV
Sbjct: 758 HPSSSLHGQKKEAIMFLEHVFTQKSYAKKVAVIQSVWIPEV 798
Score = 311 (114.5 bits), Expect = 2.7e-71, Sum P(3) = 2.7e-71
Identities = 68/155 (43%), Positives = 94/155 (60%)
Query: 76 RIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVFLTGQEEIETCNEILQ 134
+I GR+FPV+I ++ P D V ++ +IH +PL GDILVFL GQE IE +++
Sbjct: 341 KIEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIE 400
Query: 135 DRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYV 194
+ L S + ++ LP++ L + Q F P RKVVLATNIAETS+T+ + YV
Sbjct: 401 EYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYV 460
Query: 195 IDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
ID G K + + G+ESL V ISK+SA QRAG
Sbjct: 461 IDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAG 495
Score = 149 (57.5 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 45/149 (30%), Positives = 71/149 (47%)
Query: 1152 GDHLVLLNIYNQW-ADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM--E---- 1204
GD +V L + A+ T+WC + I R+M++A ++R QL L M E
Sbjct: 650 GDLMVYLTTMQMYTAENSDRTEWCKKRKINLRTMRQALNIRRQLRSLCVSEGMLTEKPPP 709
Query: 1205 -----LVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPR 1259
+ +P I K G+ A L+ SY T++ V IHP+SSL +
Sbjct: 710 DPQPFVPLSPEAAETITKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAIHPSSSLHGQKKE 769
Query: 1260 WVLYHELVFTTKEFMRQVTEIESKWLLEV 1288
+++ E VFT K + ++V I+S W+ EV
Sbjct: 770 AIMFLEHVFTQKSYAKKVAVIQSVWIPEV 798
Score = 128 (50.1 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 747 VGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDP--GFC 804
VGY++RF+ + T IK++T+G L +E L +P L YS +++DE H + +D GF
Sbjct: 225 VGYSVRFDHNVPKGTKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFL 284
Query: 805 KQNNFN----SRTGMESLTVVPISKASAN 829
KQ + R G+ L VV +S A+AN
Sbjct: 285 KQMLLSPDKPGRGGLP-LKVVAMS-ATAN 311
Score = 116 (45.9 bits), Expect = 2.7e-71, Sum P(3) = 2.7e-71
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIV-------RFRSDLKL 53
+T+G L +E L +P L YS +++DE HER + D+L G +K ++ R LK+
Sbjct: 244 LTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLSPDKPGRGGLPLKV 303
Query: 54 LISSATLDAQKFSEFF 69
+ SAT + + FF
Sbjct: 304 VAMSATANIETLENFF 319
Score = 110 (43.8 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 639 LSLPGNRD----KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
LS+P + +G + K ++ +K+LPI+ + + + +R + VLI+ GET
Sbjct: 83 LSVPSRKKSATGRGASSKPIQAKGDPSLLPLRKALPIWQHQGAIREHLRKNDVLILVGET 142
Query: 695 GSGKTTQIPQYLHEAGFTKDKMKI 718
GSGK+TQ+PQ+L + + + + I
Sbjct: 143 GSGKSTQVPQFLADEEWCRPRQVI 166
Score = 39 (18.8 bits), Expect = 4.2e-44, Sum P(3) = 4.2e-44
Identities = 16/70 (22%), Positives = 28/70 (40%)
Query: 635 FIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLII---E 691
F+ + P + E TEK+ K + E K P K D +D + + +
Sbjct: 31 FLNGVPKPKQAETKEAPGTEKEVKHDDEEPASKKKDAVPGKNAQKDDSKDSLLSVPSRKK 90
Query: 692 GETGSGKTTQ 701
TG G +++
Sbjct: 91 SATGRGASSK 100
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 486 (176.1 bits), Expect = 2.8e-71, Sum P(2) = 2.8e-71
Identities = 108/345 (31%), Positives = 188/345 (54%)
Query: 797 YVIDPGFCKQNN-FNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+VID G ++ ++ R +SL + PIS++ A K F LY+ +
Sbjct: 355 FVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVLGSSSSGKLFCLYSEEFASKD 414
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+ E+Q NL + VL +K + I L H DF++ P E+L+ ALE L L AL++ G
Sbjct: 415 MRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDG 474
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+L++ G M+EFPLDP + K +LAS ++ CV+E++TIA+M++ + P A T
Sbjct: 475 NLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPSGAEAEALT 534
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLI 1028
K F GDH L+N+Y + D ++ +WC++ F+ +++ A +R +L+
Sbjct: 535 CWKTFLHPEGDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALRMADVIRAELL 594
Query: 1029 GLVQRVEMELVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPN 1083
+++R+E+ + T+NI+KA+ +GYF IA+ + SG+Y H Q +HP
Sbjct: 595 EIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPL 654
Query: 1084 S--SLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
S S+ +++P WVL+H+ + ++R +EI + +++ P YY
Sbjct: 655 SCYSVTKKMPEWVLFHKFSISENNYIRIASEISPELFMQLVPQYY 699
Score = 313 (115.2 bits), Expect = 2.8e-71, Sum P(2) = 2.8e-71
Identities = 74/238 (31%), Positives = 132/238 (55%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L SY V+I+D+ ER++ TD+L GL+KD++ R +LKL+I+S+
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPHL 221
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
S ++ + P+ + +R PV++ Y + + ++A + I +IH + GDI+VFL
Sbjct: 222 ISTLSSYYGNVPLIEVTSKR-PVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIVVFLA 280
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA-------RK 174
+++IE EI+ L + EL+++P+Y P + + +F P R+
Sbjct: 281 CEQDIEKAYEIVCQEGTNLNPDLGELVVVPLY---PKE-KCALFKPNDEAEKRCQVYQRR 336
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNN-FNSRTGMESLTVVPISKASANQRAGVI 231
VVL + E+ + + + +VID G ++ ++ R +SL + PIS++ A R V+
Sbjct: 337 VVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVL 394
Score = 235 (87.8 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 49/173 (28%), Positives = 94/173 (54%)
Query: 1152 GDHLVLLNIYNQWADADFST-------QWCYENFIQHRSMKRARDVREQLIGLVQRVEME 1204
GDH L+N+Y + D ++ +WC++ F+ +++ A +R +L+ +++R+E+
Sbjct: 544 GDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALRMADVIRAELLEIIKRIELP 603
Query: 1205 LVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS--SLFEEL 1257
+ T+NI+KA+ +GYF IA+ + SG+Y H Q +HP S S+ +++
Sbjct: 604 YAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSCYSVTKKM 663
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNKKM 1306
P WVL+H+ + ++R +EI + +++ P YY P E +D + M
Sbjct: 664 PEWVLFHKFSISENNYIRIASEISPELFMQLVPQYYFSNLPPSESKDILQQVM 716
Score = 220 (82.5 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 47/137 (34%), Positives = 72/137 (52%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG--CTQP 723
++ LPI+ K ++ + QV+I+ G+ GK++Q+PQ+ E + G CTQ
Sbjct: 59 REDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVVCTQV 118
Query: 724 XXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLAS 783
+EM V +G EVGY I FE+C + TI++Y TD L RE +S P L S
Sbjct: 119 HKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFLGS 178
Query: 784 YSVMIIDEAHPKVYVID 800
Y V+I+D+ + D
Sbjct: 179 YGVIILDDVQERSIATD 195
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 499 (180.7 bits), Expect = 5.5e-71, Sum P(2) = 5.5e-71
Identities = 103/232 (44%), Positives = 152/232 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRF-RSDLKLLISSAT 59
+TDG L RE + DL YSV++IDEAHERT+ TD++ G +K +++ R DL++++ SAT
Sbjct: 179 LTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSAT 238
Query: 60 LDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVF 119
L A+KFSEFF++AP+ + GR+F V YY KAP D +DA + +QI+ + LGDIL F
Sbjct: 239 LQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCF 298
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILP--VYSNLPTDMQTKIFLPTPPNARKVVL 177
L GQEEI+ I++ + + + +I+P +Y+ LP Q+ +F P RKVV
Sbjct: 299 LPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVF 358
Query: 178 ATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
+TNIAETS+TI + +V+D G K + + G+ +L VPIS+ASA QR+G
Sbjct: 359 STNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSG 410
Score = 297 (109.6 bits), Expect = 7.3e-48, Sum P(2) = 7.3e-48
Identities = 64/166 (38%), Positives = 98/166 (59%)
Query: 645 RDKGEEEMTEKQKKKL--NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQI 702
R E +T K K ++ + +++LP+Y K++++ + + V ++ GETGSGK+TQI
Sbjct: 55 RSNKENVLTYKSLKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQI 114
Query: 703 PQYLHEAGF-TKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERT 761
PQ++ E + TK I TQP +E G KLG +VGY++RF++ T+ RT
Sbjct: 115 PQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRT 174
Query: 762 IIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDP--GFCK 805
+KY+TDG L RE + DL YSV++IDEAH + + D GF K
Sbjct: 175 RLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLK 220
Score = 294 (108.6 bits), Expect = 5.5e-71, Sum P(2) = 5.5e-71
Identities = 78/263 (29%), Positives = 132/263 (50%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+V+D G K + + G+ +L VPIS+ASA Q K FRLY Y +L
Sbjct: 374 FVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYV-KL 432
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
+ PEI R ++ + VLMLK G++DL+++ + + P E +V+ L++LY LGAL+ G
Sbjct: 433 PKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGK 492
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+TK G++MA PL P + +L+ + + C+ +++ I S LSV + ++ +
Sbjct: 493 ITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNER 552
Query: 977 RKNFFMLG---GDHLVLLNIYNQW-----ADADFSTQ---WCYENFIQHRSMKRARDVRE 1025
R + G GD ++L +++ + D S++ WC I R K VR+
Sbjct: 553 RLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRD 612
Query: 1026 QLIGLVQRVEMELVSNPTETVNI 1048
QL +R+ + E+ I
Sbjct: 613 QLRVYCKRLFSSISEEDEESKKI 635
Score = 135 (52.6 bits), Expect = 3.0e-54, Sum P(2) = 3.0e-54
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 1107 MRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK-TLGKSRAELGG-DHLVLLNIYNQW 1164
+ QV +I S +E P E ++ +++ GK +L L + Y
Sbjct: 522 LSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELG 581
Query: 1165 ADADFSTQ---WCYENFIQHRSMKRARDVREQLIGLVQRV---------EMELVSNPTET 1212
D S++ WC I R K VR+QL +R+ E + + E
Sbjct: 582 KSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGEL 641
Query: 1213 VN-IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF--EELPRWVLYHELVFT 1269
++ I K G+ + A SY+T + + IHP+S LF + P ++Y E VFT
Sbjct: 642 ISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPG-IMYTEYVFT 700
Query: 1270 TKEFMRQVTEIESKWLLEV 1288
TK + R V+ IE WL EV
Sbjct: 701 TKGYARNVSRIELSWLQEV 719
Score = 134 (52.2 bits), Expect = 3.9e-54, Sum P(2) = 3.9e-54
Identities = 41/128 (32%), Positives = 59/128 (46%)
Query: 1006 WCYENFIQHRSMKRARDVREQLIGLVQRV---------EMELVSNPTETVN-IRKAITAG 1055
WC I R K VR+QL +R+ E + + E ++ I K G
Sbjct: 593 WCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFLTG 652
Query: 1056 YFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLF--EELPRWVLYHELVFTTKEFMRQVTEI 1113
+ + A SY+T + + IHP+S LF + P ++Y E VFTTK + R V+ I
Sbjct: 653 FIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPG-IMYTEYVFTTKGYARNVSRI 711
Query: 1114 ESKWLLEV 1121
E WL EV
Sbjct: 712 ELSWLQEV 719
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 507 (183.5 bits), Expect = 4.4e-65, Sum P(3) = 4.4e-65
Identities = 102/231 (44%), Positives = 153/231 (66%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E +P L YS++I+DE HERTL TD+L G++K I+ R+D +L++SSA++
Sbjct: 122 MTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASV 181
Query: 61 DAQKFSEFF--DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILV 118
DA K S+FF D I G+ FPV+ + + P +Y+D+ + +++ I++T P GDILV
Sbjct: 182 DANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILV 241
Query: 119 FLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
FL+G++EIE C + ++D + + L+ LP+++ L D Q ++F + RKV+ +
Sbjct: 242 FLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFS 301
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TNIAETS+TID I+YV+D GF KQ +N T L VPISK+SA QR+G
Sbjct: 302 TNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSG 352
Score = 468 (169.8 bits), Expect = 7.4e-68, Sum P(2) = 7.4e-68
Identities = 123/368 (33%), Positives = 193/368 (52%)
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 827
DG R+ + ++A S+ I D VYV+D GF KQ +N T L VPISK+S
Sbjct: 292 DGDF-RKVIFSTNIAETSITI-DGI---VYVVDSGFNKQRIYNPYTRTSKLINVPISKSS 346
Query: 828 ANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF 887
A Q K FRLYT AY +++ +I ++ VL LK LG+ +++ F
Sbjct: 347 AIQRSGRAGRTMRGKVFRLYTEKAYSL-MKEEFEADILNCDMSPLVLFLKGLGLKNILQF 405
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTK-LGRRMAEFPLDPMMGKMLLASEKYKCV 946
F PP L+ ALE LY LG L+ G+LT LG +++ LD + K LL S ++ C
Sbjct: 406 PFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCT 465
Query: 947 EEIVTIASMLSVNGAIFYRPKDKIIH-ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQ 1005
EI++IAS+L+ G +FY P + A A +FF GD + LN++ + Q
Sbjct: 466 HEILSIASILTA-GEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQ 524
Query: 1006 WCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSN-PTETVN-IRKAITAGYFYHIAKL 1063
WC +N++ ++++++A D+R L+ + + + P+ + I K + G+ ++A L
Sbjct: 525 WCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHL 584
Query: 1064 SKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFT-TKEFMRQVTEIESKWLLEVA 1122
GSYKT Q V + +S L E+ W++Y V + T+ F++ +++IES WL
Sbjct: 585 QNDGSYKTIGGKQ-VWLDSSSVLHEKKTPWIMYSSAVESETQIFVKNISKIESFWL---- 639
Query: 1123 PHYYKPRE 1130
YYK RE
Sbjct: 640 DKYYK-RE 646
Score = 283 (104.7 bits), Expect = 7.4e-68, Sum P(2) = 7.4e-68
Identities = 61/141 (43%), Positives = 81/141 (57%)
Query: 660 LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
LNI+ KK LPI ++ L+ AV +Q+ I+ G TG GKTTQIPQ+L+EAG+ IG
Sbjct: 18 LNIQ--KKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIG 75
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
CTQP E+ G GY+I+F+ SE+T IKYMTDG L E +P
Sbjct: 76 CTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDP 135
Query: 780 DLASYSVMIIDEAHPKVYVID 800
L YS++I+DE H + D
Sbjct: 136 LLERYSIVILDEVHERTLSTD 156
Score = 183 (69.5 bits), Expect = 4.4e-65, Sum P(3) = 4.4e-65
Identities = 43/149 (28%), Positives = 79/149 (53%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSN-PT 1210
GD + LN++ + QWC +N++ ++++++A D+R L+ + + + P+
Sbjct: 504 GDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPS 563
Query: 1211 ETVN-IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFT 1269
+ I K + G+ ++A L GSYKT Q V + +S L E+ W++Y V +
Sbjct: 564 SDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHEKKTPWIMYSSAVES 622
Query: 1270 -TKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T+ F++ +++IES WL YYK RE
Sbjct: 623 ETQIFVKNISKIESFWL----DKYYK-RE 646
Score = 37 (18.1 bits), Expect = 4.4e-65, Sum P(3) = 4.4e-65
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 510 RKYLEKRKEDKVAELEADILD 530
R Y EK E EADIL+
Sbjct: 364 RLYTEKAYSLMKEEFEADILN 384
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 406 (148.0 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 95/239 (39%), Positives = 137/239 (57%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTD L + ++ + L+ S +IIDEAHER+L+TD+L L+K ++ R DL+L+I SAT
Sbjct: 403 MTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATA 462
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPE---------ADYIDACVVSILQIHATQ 111
DA++ S++F + + GR FPV+I Y+ + A Y+ V ++IH T+
Sbjct: 463 DAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTE 522
Query: 112 PLGDILVFLTGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPP 170
G IL FLT Q E+E C + I LP++ L + Q ++F P
Sbjct: 523 KEGTILAFLTSQAEVEWACERFITPSA----------IALPLHGKLSFEEQFRVF-QNHP 571
Query: 171 NARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RKV+ ATNIAETSLTI + YVID G K++ + RTGM L V +S++SA QRAG
Sbjct: 572 GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAG 630
Score = 362 (132.5 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 82/251 (32%), Positives = 144/251 (57%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVID G K++ + RTGM L V +S++SA Q +C+RLY+ + +
Sbjct: 594 YVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFD-SM 652
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL-NHHG 915
N PEI+R++LG A+L + ALG+N++ F+F+D P E + +A++ L LGA+ +G
Sbjct: 653 NLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNG 712
Query: 916 --DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPK--DKII 971
+LT+ G + + L+P +GK++L +++ +E + +A++++ +IF R D +
Sbjct: 713 VHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKM 772
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIG 1029
AD + F GD LL++Y +WA + +WC+EN + +SM+R D ++L
Sbjct: 773 KADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEI 832
Query: 1030 LVQRVEMELVS 1040
++R E+ LVS
Sbjct: 833 CIER-ELTLVS 842
Score = 180 (68.4 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 50/179 (27%), Positives = 86/179 (48%)
Query: 622 QEQYELLLDNQIDF-IQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLID 680
Q+ YE LD++ + + L G D +++ + +E+ LPIY +++ ++
Sbjct: 262 QDGYEFDLDDEEEGDVAVFCLEGAYDWRRIHCLIRRECR-RLED---GLPIYAYRRQILK 317
Query: 681 AVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMG 740
+ Q++++ GETGSGK+TQ+ Q+L ++G + I CTQP EE
Sbjct: 318 KIHREQIMVLIGETGSGKSTQLVQFLADSGVAASE-SIVCTQPRKIAAMTLADRVREESS 376
Query: 741 VKLGC----EVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
GC V F + + YMTD L + ++ + L+ S +IIDEAH +
Sbjct: 377 ---GCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHER 432
Score = 176 (67.0 bits), Expect = 5.8e-46, Sum P(2) = 5.8e-46
Identities = 56/201 (27%), Positives = 98/201 (48%)
Query: 968 DKIIHADTARKNFFMLGGDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVRE 1025
DK+ AD + F GD LL++Y +WA + +WC+EN + +SM+R D +
Sbjct: 770 DKM-KADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVK 828
Query: 1026 QLIGLVQRVEMELVS------NPTETV----NIRKAITAGYFYHIAKLSKSGS--YKTAK 1073
+L ++R E+ LVS NP E +++ I A ++A + Y+ A
Sbjct: 829 ELEICIER-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVAL 887
Query: 1074 HNQTVMIHPNSSL--FEELPRWVLYHELVFTTKEFMRQVT--EIESKWLLEVAPHYYKPR 1129
Q V +HP+ SL F + P WV++ EL+ +++ VT + E+ ++L+ P + +
Sbjct: 888 TGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQ 947
Query: 1130 ELEDSTNKKMPKTLGKSRAEL 1150
D ++ K +G S L
Sbjct: 948 M--DERRLRIKKVVGCSSTVL 966
Score = 166 (63.5 bits), Expect = 6.5e-45, Sum P(2) = 6.5e-45
Identities = 51/184 (27%), Positives = 91/184 (49%)
Query: 1152 GDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS-- 1207
GD LL++Y +WA + +WC+EN + +SM+R D ++L ++R E+ LVS
Sbjct: 786 GDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIER-ELTLVSPS 844
Query: 1208 ----NPTETV----NIRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNSSL--FE 1255
NP E +++ I A ++A + Y+ A Q V +HP+ SL F
Sbjct: 845 YWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFG 904
Query: 1256 ELPRWVLYHELVFTTKEFMRQVT--EIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKS 1313
+ P WV++ EL+ +++ VT + E+ ++L+ P + + D ++ K +G S
Sbjct: 905 QKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQM--DERRLRIKKVVGCS 962
Query: 1314 RAEL 1317
L
Sbjct: 963 STVL 966
Score = 40 (19.1 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 252 LRGCAHVLGEEVLRPEVSQPFRSFGYLGVMQDCRYI 287
L GC+H+ + L + R+F ++ C +I
Sbjct: 1577 LEGCSHLFCKACLLEQFEASMRNFDAFPIL--CSHI 1610
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 395 (144.1 bits), Expect = 1.9e-64, Sum P(2) = 1.9e-64
Identities = 94/239 (39%), Positives = 134/239 (56%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTD L + ++ + L+ S +IIDEAHER+L+TD+L L++ ++ R DL+L+I SAT
Sbjct: 400 MTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATA 459
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPE---------ADYIDACVVSILQIHATQ 111
DA + S++ D + + GR FPV+I Y+ + A Y V ++IH T+
Sbjct: 460 DANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTE 519
Query: 112 PLGDILVFLTGQEEIE-TCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPP 170
G IL FLT Q E+E C + I LP++ L + Q +F P
Sbjct: 520 KEGTILAFLTSQAEVEWACERFVAPSA----------IALPLHGKLSFEEQFMVF-QNYP 568
Query: 171 NARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RKV+ ATNIAETSLTI + YVID G K++ + RTGM L V +S++SA QRAG
Sbjct: 569 GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAG 627
Score = 363 (132.8 bits), Expect = 1.9e-64, Sum P(2) = 1.9e-64
Identities = 83/251 (33%), Positives = 144/251 (57%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVID G K++ + RTGM L V +S++SA Q +C+RLY+ + +
Sbjct: 591 YVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFD-SM 649
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL-NHHG 915
N PEI+R++LG A+L + ALGI+++ F+F+D P E + +A++ L LGA+ +G
Sbjct: 650 NLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNG 709
Query: 916 --DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPK--DKII 971
+LT+ G + + L+P +GK++L +++ +E + +A++++ +IF R D +
Sbjct: 710 VLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKM 769
Query: 972 HADTARKNFFMLGGDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIG 1029
AD + F GD LL++Y +WA D +WC+EN + +SM+R D ++L
Sbjct: 770 KADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEI 829
Query: 1030 LVQRVEMELVS 1040
++R E+ LVS
Sbjct: 830 CIER-ELTLVS 839
Score = 188 (71.2 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 59/215 (27%), Positives = 100/215 (46%)
Query: 622 QEQYELLLDNQIDF-IQALSLPGNRD-KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLI 679
Q+ YE +D++ D + SL G D + + ++ ++L + LPIY +++ ++
Sbjct: 259 QDGYEFDVDDEDDEDVAVFSLEGAYDWRRIHYLILRECRRL-----EDGLPIYAYRRQIL 313
Query: 680 DAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEM 739
+ Q++++ GETGSGK+TQ+ Q+L ++G + I CTQP EE
Sbjct: 314 KKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASE-SIVCTQPRKIAAMTLTDRVREES 372
Query: 740 GVKLGC----EVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
GC V F + + YMTD L + ++ + L+ S +IIDEAH +
Sbjct: 373 S---GCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHER 429
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 830
D SR ++ V+ + A ANQ
Sbjct: 430 SLNTDLLLALLRKLLSRR-IDLRLVIMSATADANQ 463
Score = 178 (67.7 bits), Expect = 5.6e-45, Sum P(2) = 5.6e-45
Identities = 57/201 (28%), Positives = 98/201 (48%)
Query: 968 DKIIHADTARKNFFMLGGDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVRE 1025
DK+ AD + F GD LL++Y +WA D +WC+EN + +SM+R D +
Sbjct: 767 DKM-KADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVK 825
Query: 1026 QLIGLVQRVEMELVS------NPTETVN----IRKAITAGYFYHIAKLSKSGS--YKTAK 1073
+L ++R E+ LVS NP E ++ I A ++A + Y+ A
Sbjct: 826 ELEICIER-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVAL 884
Query: 1074 HNQTVMIHPNSSL--FEELPRWVLYHELVFTTKEFMRQVT--EIESKWLLEVAPHYYKPR 1129
+Q V +HP+ SL F + P WV++ EL+ +++ VT + E+ ++L+ P + +
Sbjct: 885 TSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPFDASQ 944
Query: 1130 ELEDSTNKKMPKTLGKSRAEL 1150
D ++ K +G S L
Sbjct: 945 M--DERRLRVKKVVGCSSTVL 963
Score = 170 (64.9 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 52/184 (28%), Positives = 91/184 (49%)
Query: 1152 GDHLVLLNIYNQWADA--DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS-- 1207
GD LL++Y +WA D +WC+EN + +SM+R D ++L ++R E+ LVS
Sbjct: 783 GDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIER-ELTLVSPS 841
Query: 1208 ----NPTETVN----IRKAITAGYFYHIAKLSKSGS--YKTAKHNQTVMIHPNSSL--FE 1255
NP E ++ I A ++A + Y+ A +Q V +HP+ SL F
Sbjct: 842 YWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFG 901
Query: 1256 ELPRWVLYHELVFTTKEFMRQVT--EIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKS 1313
+ P WV++ EL+ +++ VT + E+ ++L+ P + + D ++ K +G S
Sbjct: 902 QKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPFDASQM--DERRLRVKKVVGCS 959
Query: 1314 RAEL 1317
L
Sbjct: 960 STVL 963
Score = 40 (19.1 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 252 LRGCAHVLGEEVLRPEVSQPFRSFGYLGVMQDCRYI 287
L GC+H+ + L + R+F ++ C +I
Sbjct: 1574 LEGCSHLFCKACLLEQFEASMRNFDAFPIL--CSHI 1607
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 651 (234.2 bits), Expect = 7.7e-63, P = 7.7e-63
Identities = 121/228 (53%), Positives = 169/228 (74%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L E DL YS +I+DEAHER+L+TD+LFGL++++V RSDLKL+++SAT+
Sbjct: 38 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATM 97
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA+KF+ FF + P+F IPGR FPVDI ++K P+ DY++A V LQ+H + GDIL+F+
Sbjct: 98 DAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFM 157
Query: 121 TGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATN 180
GQE+IE ++ + + + L L +LP+YS LP+D+Q KIF P RK ++ATN
Sbjct: 158 PGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN 216
Query: 181 IAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRA 228
IAETSLT+D I++VID G+CK FN R GM++L + PIS+A+ANQR+
Sbjct: 217 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 264
Score = 206 (77.6 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 42/59 (71%), Positives = 46/59 (77%)
Query: 737 EEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
EEMG LG EVGYAIRFEDCTSE T+IKYMTDG L RE L E DL YS +I+DEAH +
Sbjct: 9 EEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHER 67
Score = 105 (42.0 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 830
++VID G+CK FN R GM++L + PIS+A+ANQ
Sbjct: 228 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQ 262
Score = 48 (22.0 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1069 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1127
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 133 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 192
Query: 1128 PRELEDSTNKKMPKTLGK 1145
P +L+ +K P + K
Sbjct: 193 PSDLQAKIFQKAPDGVRK 210
Score = 48 (22.0 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK- 1294
Y A Q++ +H + + + L ++ T+ + + + E+E+ L V P Y +
Sbjct: 133 YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL 192
Query: 1295 PRELEDSTNKKMPKTLGK 1312
P +L+ +K P + K
Sbjct: 193 PSDLQAKIFQKAPDGVRK 210
>UNIPROTKB|B0V0F7 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 PROSITE:PS00690
GO:GO:0005524 GO:GO:0003676 eggNOG:COG1643 GO:GO:0008026
HGNC:HGNC:2739 EMBL:CR759873 IPI:IPI00894447 SMR:B0V0F7
Ensembl:ENST00000456005 UCSC:uc011elj.1 Uniprot:B0V0F7
Length = 188
Score = 647 (232.8 bits), Expect = 2.1e-62, P = 2.1e-62
Identities = 117/154 (75%), Positives = 140/154 (90%)
Query: 21 VMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLDAQKFSEFFDDAPVFRIPGR 80
V+++DEAHERTLHTDILFGL+KD+ RFR +LK+L++SAT+D +FS FFDDAPVFRIPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRL 140
RFPVDI+YTKAPEADY++ACVVS+LQIH TQP GDILVFLTGQEEIE E+LQDR RRL
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 141 GSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
GSKI+EL++LP+Y+NLP+DMQ +IF PTPP ARK
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 188
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 306 (112.8 bits), Expect = 8.6e-59, Sum P(3) = 8.6e-59
Identities = 91/301 (30%), Positives = 146/301 (48%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ +N G++S V +SKASANQ C+RLY++ ++H+
Sbjct: 775 YVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDF 834
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E + PEI R+ + + VL +K++ I+++I+F F PP L A++ L LGAL++
Sbjct: 835 EQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEM 894
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+T+ G++M+ FPL P KMLL S++ C+ IV I S LSV G F + I+ +
Sbjct: 895 ITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSV-GDPFINEFELGINEISR 953
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE- 1035
+ N D + + D + + F + RS D + L+ V
Sbjct: 954 KPNPDENLDDKIREHDESTPGMDPELKKE-LRSKFYKSRSQFSKLDKFSDVFRLLSVVSA 1012
Query: 1036 MELVSNPTETVNIRKAITAGYFYH-IAKLSKSGSY----KTAKHNQTVMIHPNSSLFEEL 1090
M+ V + + ++K G I KL K Y T+K N V+I N L ++
Sbjct: 1013 MDYVPKEQKEIFMKKNFLRGKLMEEIVKLRKQLMYIIKSNTSKENIAVVIR-NEDLKSDI 1071
Query: 1091 P 1091
P
Sbjct: 1072 P 1072
Score = 277 (102.6 bits), Expect = 3.2e-46, Sum P(2) = 3.2e-46
Identities = 99/368 (26%), Positives = 159/368 (43%)
Query: 435 PKVRAFMGHFLTDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXX 494
PKV G + DDD ++ E S + +N + ++ D R
Sbjct: 170 PKVWDEYGEGGSSEDDDGEDDFEASFGSMPKPTDNEEKKSSGFIDHRPAKFGGSGLSFGF 229
Query: 495 XSRDKIIPKLRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXX 554
S K+I K ++KY R+ ++ EL+ +DE F
Sbjct: 230 -SNIKVINKESKTPKKKY-NWRQRVEMEELKKHGKEDEMDFD------TTSEDDDEEEDQ 281
Query: 555 XXXAKEHDKARELEKVQRYYMPKGTKGPXXXXXXXXXXXXPHYEQRKWE--DEQMSSAIF 612
K H LE+V+ G++ + E +K E D+++ +
Sbjct: 282 EEEDKMHPSENPLEEVESADSETGSEKFDQNDVANEFKDWANQEIKKLEGRDQELVTPTL 341
Query: 613 RVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIY 672
+ K +E LD D +Q +P N + + + + I++ + LP++
Sbjct: 342 NIDYKPIIRKED----LD---DGLQEAYVPINENSTRKAFYVEVSRSDEIQKARIQLPVF 394
Query: 673 PFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF-TKDKMK----IGCTQPXXXX 727
+ +++A+ + V+II GETGSGKTTQ+PQ+L+EAGF +D +G TQP
Sbjct: 395 GEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRVA 454
Query: 728 XXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVM 787
E+G G +VGY IRF+ E T +K+MTDG L RE + + L YS +
Sbjct: 455 AVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTKYSSI 513
Query: 788 IIDEAHPK 795
IIDEAH +
Sbjct: 514 IIDEAHER 521
Score = 245 (91.3 bits), Expect = 8.6e-59, Sum P(3) = 8.6e-59
Identities = 62/141 (43%), Positives = 80/141 (56%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDL--------- 51
MTDG L RE + + L YS +IIDEAHER ++TDIL G++ VR R+ L
Sbjct: 492 MTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHK 551
Query: 52 --KLLISSATLDAQKFSE---FFDDAP-VFRIPGRRFPVDIYYTKAPEADYIDACVVSIL 105
KL+I SATL FSE F AP V ++ R+FPV I++ + +Y D
Sbjct: 552 KLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTC 611
Query: 106 QIHATQPLGDILVFLTGQEEI 126
+IH P G ILVFLTGQ+EI
Sbjct: 612 KIHQKLPPGAILVFLTGQQEI 632
Score = 204 (76.9 bits), Expect = 8.6e-59, Sum P(3) = 8.6e-59
Identities = 46/107 (42%), Positives = 65/107 (60%)
Query: 124 EEIETCNEILQDRVRRLGSKIKE-LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIA 182
EE E E+L + G + L +LP+YS LPT Q ++F P +R ++ATN+A
Sbjct: 710 EEEEGFEEVLTE-----GQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVA 764
Query: 183 ETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
ETSLTI + YV+D G K+ +N G++S V +SKASANQR+G
Sbjct: 765 ETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSG 811
Score = 52 (23.4 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 650 EEMTEKQKK--KLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGK 698
E +TE++KK K ++E T K + K+ +D +HQ+ E +T GK
Sbjct: 64 EPLTEEEKKMKKRKLQELFTPKESKVSRLKKKRLDKFIEHQLKREERKTIIGK 116
Score = 37 (18.1 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 14/73 (19%), Positives = 36/73 (49%)
Query: 1130 ELEDSTNKKMPKTLGK-SRAELGGDHLVLLNIYN--QWADADFSTQWCYENFIQHRSMKR 1186
EL+ K K+ + S+ + D LL++ + + + + +NF++ + M+
Sbjct: 978 ELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEIFMKKNFLRGKLMEE 1037
Query: 1187 ARDVREQLIGLVQ 1199
+R+QL+ +++
Sbjct: 1038 IVKLRKQLMYIIK 1050
Score = 37 (18.1 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 560 EHDKARELEKVQRYYMPKGTK 580
E +K + K+Q + PK +K
Sbjct: 68 EEEKKMKKRKLQELFTPKESK 88
Score = 37 (18.1 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLT 215
T P R VV + E N + + G+ + + N R+G T
Sbjct: 769 TIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRT 816
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 394 (143.8 bits), Expect = 4.6e-57, Sum P(2) = 4.6e-57
Identities = 92/240 (38%), Positives = 140/240 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T G L R+ EP L Y V+I+DE HER LH D L G+++ ++ R DLK+++ SAT+
Sbjct: 255 LTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATI 314
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKA---P---EADYIDAC-VVSILQI--HATQ 111
+ FS +F +APV ++PGR FP+ + Y P +++ +D + +L+ H
Sbjct: 315 NISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYP 374
Query: 112 P--LGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
P GD+LVFL+G EI E Q S + ++LP++S L Q K+F P
Sbjct: 375 PEERGDLLVFLSGMAEISAVLEAAQT----YASHTQRWVVLPLHSALSVADQDKVFDVAP 430
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
P RK +L+TNIAETS+TID I +V+D G K+ +++ + ++ L IS+ASA QR G
Sbjct: 431 PGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 490
Score = 288 (106.4 bits), Expect = 4.6e-57, Sum P(2) = 4.6e-57
Identities = 73/241 (30%), Positives = 116/241 (48%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+V+D G K+ +++ + ++ L IS+ASA Q CFRLY Y
Sbjct: 454 FVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYD-AF 512
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEI+R+ L + VL +K++ + D F F++PPP +L A+ L GAL+
Sbjct: 513 APYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEA 572
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +G +A+ P+D ++GKML+ + VE ++TIA+ LSV F R A
Sbjct: 573 LTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSP-FTRSAQSSPECAAA 631
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLV 1031
R+ GD L N++N W S +WC I+ + ++R Q L+
Sbjct: 632 RRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELL 691
Query: 1032 Q 1032
+
Sbjct: 692 E 692
Score = 243 (90.6 bits), Expect = 7.7e-41, Sum P(2) = 7.7e-41
Identities = 49/134 (36%), Positives = 75/134 (55%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++ + +LPI + ++ +++HQV+++ G+TG GK+TQ+PQYL AGF+ + CT
Sbjct: 155 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACT 210
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP E + G +VGY IRFE S T I ++T G L R+ EP L
Sbjct: 211 QPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSL 270
Query: 782 ASYSVMIIDEAHPK 795
Y V+I+DE H +
Sbjct: 271 PQYEVLIVDEVHER 284
Score = 58 (25.5 bits), Expect = 6.7e-33, Sum P(2) = 6.7e-33
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 1152 GDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLVQ 1199
GD L N++N W S +WC I+ + ++R Q L++
Sbjct: 640 GDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELLE 692
>TAIR|locus:2147785 [details] [associations]
symbol:AT5G14900 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004386
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
KO:K12820 EMBL:AL391146 OMA:IRTVTHI IPI:IPI00537280 PIR:T51435
RefSeq:NP_196994.1 UniGene:At.65514 ProteinModelPortal:Q9LFR5
SMR:Q9LFR5 EnsemblPlants:AT5G14900.1 GeneID:831342
KEGG:ath:AT5G14900 TAIR:At5g14900 InParanoid:Q9LFR5
PhylomeDB:Q9LFR5 ProtClustDB:CLSN2916823 Genevestigator:Q9LFR5
Uniprot:Q9LFR5
Length = 301
Score = 593 (213.8 bits), Expect = 1.3e-56, P = 1.3e-56
Identities = 125/287 (43%), Positives = 180/287 (62%)
Query: 868 NLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEF 927
NL N VL LK L + +L+ FD +D P +TL AL+ LY LGAL+ +LTK G M+EF
Sbjct: 3 NLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSEF 62
Query: 928 PLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA-DTARKNFFMLGGD 986
PLDP M KML+ S ++ C EI++I++MLSV F RP+ + A D A+ +F + GD
Sbjct: 63 PLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNC-FIRPRGEAQKAADEAKSSFAHIDGD 121
Query: 987 HLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS---NPT 1043
HL LLN+++ + + WC FI +R+MK A VREQL+ ++ R +++L S N
Sbjct: 122 HLTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSR 181
Query: 1044 ET-VNIRKAITAGYFYHIAKLSKSGSYKTA--KHNQTVMIHPNSSLFEELPRWVLYHELV 1100
+ VNIRKA+ AGYF +A L ++G Y T K +Q V +HP++ L + P WV+Y+E V
Sbjct: 182 DYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL-DHKPEWVVYNEYV 240
Query: 1101 FTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR 1147
FT++ F+R VT I +WL++VAPHYYK S K++ + K R
Sbjct: 241 FTSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEAKRVLERHYKKR 287
Score = 347 (127.2 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 80/208 (38%), Positives = 120/208 (57%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L V + +PR +K S A + GDHL LLN+++ + + WC
Sbjct: 90 MLSVPNCFIRPR----GEAQKAADEAKSSFAHIDGDHLTLLNLFHAFLQNNQDPNWCCTK 145
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVS---NPTET-VNIRKAITAGYFYHIAKLSKS 1233
FI +R+MK A VREQL+ ++ R +++L S N + VNIRKA+ AGYF +A L ++
Sbjct: 146 FINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSRDYYVNIRKALLAGYFMQVAHLERT 205
Query: 1234 GSYKTA--KHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPH 1291
G Y T K +Q V +HP++ L + P WV+Y+E VFT++ F+R VT I +WL++VAPH
Sbjct: 206 GHYLTFRDKDDQVVHLHPSNCL-DHKPEWVVYNEYVFTSRNFIRTVTHIRGEWLVDVAPH 264
Query: 1292 YYKPRELEDSTNKKMPKTLGKSRAELGE 1319
YYK S K++ + K R +L E
Sbjct: 265 YYKLANFPSSEAKRVLERHYKKR-KLSE 291
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 392 (143.0 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 90/240 (37%), Positives = 141/240 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T G L R+ EP L Y V+I+DE HER LH D L G+++ ++ R DLK+++ SAT+
Sbjct: 257 LTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATI 316
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTK------APEADYIDAC-VVSILQI----HA 109
+ FS +F APV ++PGR FP+ + Y A +++ +D + +L+ +
Sbjct: 317 NISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYP 376
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
+ GD+LVFL+G EI T +L D + S + ++LP++S L Q K+F P
Sbjct: 377 PEERGDLLVFLSGMAEITT---VL-DAAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAP 432
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK +L+TNIAETS+TID I +V+D G K+ +++ + ++ L IS+ASA QR G
Sbjct: 433 AGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 492
Score = 284 (105.0 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 70/241 (29%), Positives = 116/241 (48%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+V+D G K+ +++ + ++ L IS+ASA Q C+RLY Y
Sbjct: 456 FVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYD-AF 514
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEI+R+ L VL +K++ + D F F++PPP ++ A+ L GAL+
Sbjct: 515 APYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSEA 574
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +G +A+ P+D ++GKML+ + E ++TIA+ LSV F R + TA
Sbjct: 575 LTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSP-FTRSAQSNLDCATA 633
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLV 1031
R+ GD L N++N W S +WC ++ + ++R Q L+
Sbjct: 634 RRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELL 693
Query: 1032 Q 1032
+
Sbjct: 694 E 694
Score = 243 (90.6 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 49/134 (36%), Positives = 75/134 (55%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++ + +LPI + ++ +++HQV+++ G+TG GK+TQ+PQYL AGF+ + CT
Sbjct: 157 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACT 212
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP E + G +VGY IRFE S T I ++T G L R+ EP L
Sbjct: 213 QPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSL 272
Query: 782 ASYSVMIIDEAHPK 795
Y V+I+DE H +
Sbjct: 273 PQYQVLIVDEVHER 286
Score = 57 (25.1 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 1152 GDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLVQ 1199
GD L N++N W S +WC ++ + ++R Q L++
Sbjct: 642 GDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLE 694
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 412 (150.1 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
Identities = 115/368 (31%), Positives = 179/368 (48%)
Query: 794 PKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAY 852
P + +VID G ++ +N R ES + PISK A C RLY+
Sbjct: 334 PSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTL 393
Query: 853 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN 912
+ E P++ NL + VL+L I + FLD P E L+ ALE L L ALN
Sbjct: 394 ELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALN 453
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
G+L+ LG ++EFPL P + K LLAS ++ CV+E++T+A+ML+ F RP
Sbjct: 454 DDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPPLSAGE 512
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQ 1032
A R+ GDH L+ +Y + + WC + S+ +AR +R +L+ L+Q
Sbjct: 513 A-ALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQ 571
Query: 1033 RVEMELVSNPT-----ETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHP---- 1082
R+E+ L S P +++KA+ +GYF +A+ +G+Y H + P
Sbjct: 572 RIELPL-SQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSY 630
Query: 1083 -NSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPK 1141
N + P WVLYH + + V+EI+ + L+E+AP Y+ L S ++ +
Sbjct: 631 RNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSN-LPPSESRDLLN 689
Query: 1142 TLGKSRAE 1149
L + AE
Sbjct: 690 QLREGTAE 697
Score = 251 (93.4 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
Identities = 72/240 (30%), Positives = 124/240 (51%)
Query: 8 REFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS---DLKLLISSATLDAQK 64
+E S ++SV+I+DEA ER++ +D+L GL++D R R+ D ++++ + K
Sbjct: 150 QEVASTRGPGAWSVLILDEAQERSVASDLLQGLLRD-TRLRNLPGDPRVVVVTDPALEPK 208
Query: 65 FSEFFDDAPVFRIPGRRF--PVDIYYTKAPEADYIDACVVSILQI-HATQPLGDILVFLT 121
F F+ ++P+ R+P P Y P D ++A ++L++ + GD+LV+L
Sbjct: 209 FQAFWGNSPIVRVPREPGGDPTLAYKDTVP-TDLVEAACQAVLELCQQEEAPGDVLVYLP 267
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNI 181
+EEI C E L + L +LP++ +QT ++ T + RK+V+ +
Sbjct: 268 SEEEISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWL 326
Query: 182 AETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDFR 241
A+ S ++ +I +VID G ++ +N R ES + PISK A R GF P S R
Sbjct: 327 ADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLR 386
Score = 191 (72.3 bits), Expect = 4.8e-32, Sum P(2) = 4.8e-32
Identities = 49/176 (27%), Positives = 85/176 (48%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT- 1210
GDH L+ +Y + + WC + S+ +AR +R +L+ L+QR+E+ L S P
Sbjct: 524 GDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIELPL-SQPAF 582
Query: 1211 ----ETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHP-----NSSLFEELPRW 1260
+++KA+ +GYF +A+ +G+Y H + P N + P W
Sbjct: 583 GSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPTW 642
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAE 1316
VLYH + + V+EI+ + L+E+AP Y+ L S ++ + L + AE
Sbjct: 643 VLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSN-LPPSESRDLLNQLREGTAE 697
Score = 185 (70.2 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 46/164 (28%), Positives = 80/164 (48%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQ--VLIIEGETGSGKTTQIPQYLHEAGFTKDKM--KIG 719
E +++LPI+ + ++ + V+++ G+ GSGK+TQIPQ+ E + ++
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQVT 96
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
TQP +EM + LG E+GY+I EDCT T++++ D +E S
Sbjct: 97 VTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTR 156
Query: 780 DLASYSVMIIDEAHPKVYVID--PGFCKQNNFNSRTGMESLTVV 821
++SV+I+DEA + D G + + G + VV
Sbjct: 157 GPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVV 200
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 395 (144.1 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 90/240 (37%), Positives = 139/240 (57%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T G L R+ EP L Y V+I+DE HER LH D L G+++ ++ R DLK+++ SAT+
Sbjct: 254 LTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATI 313
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTK------APEADYID-ACVVSILQI----HA 109
+ FS +F APV ++PGR FP+ + Y A +++ +D + +L+ +
Sbjct: 314 NISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYP 373
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
+ GD+LVFL+G EI + E Q S+ + ++LP++S L Q K+F P
Sbjct: 374 PEERGDLLVFLSGMAEISSVLEAAQT----YASRTQRWVVLPLHSALSVADQDKVFDVAP 429
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
P RK +L+TNIAETS+TID I +V+D G K+ ++ + + L IS+ASA QR G
Sbjct: 430 PGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKG 489
Score = 277 (102.6 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 72/241 (29%), Positives = 112/241 (46%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+V+D G K+ ++ + + L IS+ASA Q CFRLY Y
Sbjct: 453 FVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYD-AF 511
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEI+R+ L VL +K++ + D F F++PPP +L A+ L GAL+
Sbjct: 512 APYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQDQGALDSSEA 571
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +G +A+ P+D ++GKML+ + E ++TIA+ LSV F R A
Sbjct: 572 LTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQSP-FTRSAQSNPECAAA 630
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLV 1031
R+ GD L N++N W S +WC I+ + ++R Q L+
Sbjct: 631 RRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELL 690
Query: 1032 Q 1032
+
Sbjct: 691 E 691
Score = 243 (90.6 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 50/147 (34%), Positives = 81/147 (55%)
Query: 651 EMTEKQK--KKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE 708
+ ++KQ + ++ + +LPI + ++ +++HQV+++ G+TG GK+TQ+PQYL
Sbjct: 141 DFSQKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLA 200
Query: 709 AGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTD 768
AGF+ + CTQP E + G +VGY IRFE + T I ++T
Sbjct: 201 AGFSH----VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTV 256
Query: 769 GTLHREFLSEPDLASYSVMIIDEAHPK 795
G L R+ EP L Y V+I+DE H +
Sbjct: 257 GLLLRQIQREPSLPQYQVLIVDEVHER 283
Score = 58 (25.5 bits), Expect = 5.2e-33, Sum P(2) = 5.2e-33
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 1152 GDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLVQ 1199
GD L N++N W S +WC I+ + ++R Q L++
Sbjct: 639 GDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELLE 691
Score = 37 (18.1 bits), Expect = 8.2e-31, Sum P(2) = 8.2e-31
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 401 QRQSPAQSYHRM 412
Q +P SYHR+
Sbjct: 700 QAPTPGDSYHRL 711
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 395 (144.1 bits), Expect = 5.7e-56, Sum P(2) = 5.7e-56
Identities = 90/240 (37%), Positives = 139/240 (57%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T G L R+ EP L Y V+I+DE HER LH D L G+++ ++ R DLK+++ SAT+
Sbjct: 259 LTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATI 318
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTK------APEADYID-ACVVSILQI----HA 109
+ FS +F APV ++PGR FP+ + Y A +++ +D + +L+ +
Sbjct: 319 NISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYP 378
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
+ GD+LVFL+G EI + E Q S+ + ++LP++S L Q K+F P
Sbjct: 379 PEERGDLLVFLSGMAEISSVLEAAQT----YASRTQRWVVLPLHSALSVADQDKVFDVAP 434
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
P RK +L+TNIAETS+TID I +V+D G K+ ++ + + L IS+ASA QR G
Sbjct: 435 PGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKG 494
Score = 277 (102.6 bits), Expect = 5.7e-56, Sum P(2) = 5.7e-56
Identities = 72/241 (29%), Positives = 112/241 (46%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+V+D G K+ ++ + + L IS+ASA Q CFRLY Y
Sbjct: 458 FVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYD-AF 516
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEI+R+ L VL +K++ + D F F++PPP +L A+ L GAL+
Sbjct: 517 APYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQDQGALDSSEA 576
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +G +A+ P+D ++GKML+ + E ++TIA+ LSV F R A
Sbjct: 577 LTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQSP-FTRSAQSNPECAAA 635
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLV 1031
R+ GD L N++N W S +WC I+ + ++R Q L+
Sbjct: 636 RRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELL 695
Query: 1032 Q 1032
+
Sbjct: 696 E 696
Score = 243 (90.6 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 50/147 (34%), Positives = 81/147 (55%)
Query: 651 EMTEKQK--KKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE 708
+ ++KQ + ++ + +LPI + ++ +++HQV+++ G+TG GK+TQ+PQYL
Sbjct: 146 DFSQKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLA 205
Query: 709 AGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTD 768
AGF+ + CTQP E + G +VGY IRFE + T I ++T
Sbjct: 206 AGFSH----VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTV 261
Query: 769 GTLHREFLSEPDLASYSVMIIDEAHPK 795
G L R+ EP L Y V+I+DE H +
Sbjct: 262 GLLLRQIQREPSLPQYQVLIVDEVHER 288
Score = 58 (25.5 bits), Expect = 5.8e-33, Sum P(2) = 5.8e-33
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 1152 GDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLVQ 1199
GD L N++N W S +WC I+ + ++R Q L++
Sbjct: 644 GDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELLE 696
Score = 37 (18.1 bits), Expect = 9.2e-31, Sum P(2) = 9.2e-31
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 401 QRQSPAQSYHRM 412
Q +P SYHR+
Sbjct: 705 QAPTPGDSYHRL 716
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 353 (129.3 bits), Expect = 7.3e-56, Sum P(2) = 7.3e-56
Identities = 99/353 (28%), Positives = 168/353 (47%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTA-WAYKHE 855
+VID G ++ +N R +S+T PISKA A K F LY + YK E
Sbjct: 365 FVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSPSGKLFCLYPEEFTYK-E 423
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLD----PPPHETLVLAL---EQLYAL 908
++ + +IQ NL + VL LK + I H +FL PP + + + Q
Sbjct: 424 MKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPPSAKHGIRSTGKTHQTRRQ 483
Query: 909 GALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKD 968
G+++ H L++ F + G+ L + C E++ I +L + P
Sbjct: 484 GSISAHSYLSQ------NFGILNKKGESLSVPCSFTCHTEVLPIHVLLHAPNCFLHTPSG 537
Query: 969 KIIHADTARKNFFMLGGDHLVLLNIYNQWADADFST--------QWCYENFIQHRSMKRA 1020
A T + F GDH L+N++N + +A ++ +WC F+ +++ A
Sbjct: 538 TEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSALRMA 597
Query: 1021 RDVREQLIGLVQRVEMELVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHN 1075
+R +L+ +++R+E+ + + +P T++I+KA+ +GYF IA+ + SG+Y H
Sbjct: 598 EMIRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIARDVDGSGNYLMLTHR 657
Query: 1076 QTVMIHPNSSLF--EELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1126
Q +HP SS + P WVL+HE + +R V+EI +E+AP YY
Sbjct: 658 QVAKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRVVSEISPHLFVELAPQYY 710
Score = 312 (114.9 bits), Expect = 7.3e-56, Sum P(2) = 7.3e-56
Identities = 73/235 (31%), Positives = 127/235 (54%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
TD L RE +S P L SY V+I+D+ HERT+ TD+L G++K ++R R L+L+I +A
Sbjct: 172 TDDMLQREMMSAPLLNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTAPHM 231
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLT 121
+ K +F P+ R+ ++ YT + D+ + + + ++H T+ GDI++FL
Sbjct: 232 SSKLQDFCGSVPLIRVENEH-QAEVVYTCSMPKDHFLSALRLLFELHHTKEKGDIVIFLA 290
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSN----LPTDMQTKIFLPTPPNARKVVL 177
+++I+ ++++ + ELI +P+Y +P Q K RKV+L
Sbjct: 291 CEQDIDKAYQMIRQEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQKC-YQKYRRKVLL 349
Query: 178 ATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVIT 232
T+ + + I NI +VID G ++ +N R +S+T PISKA A +++
Sbjct: 350 TTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILS 404
Score = 239 (89.2 bits), Expect = 7.4e-43, Sum P(3) = 7.4e-43
Identities = 51/175 (29%), Positives = 95/175 (54%)
Query: 1134 STNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFST--------QWCYENFIQHRSMK 1185
S +++ T + + GDH L+N++N + +A ++ +WC F+ +++
Sbjct: 536 SGTEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSALR 595
Query: 1186 RARDVREQLIGLVQRVEMELVS----NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAK 1240
A +R +L+ +++R+E+ + + +P T++I+KA+ +GYF IA+ + SG+Y
Sbjct: 596 MAEMIRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIARDVDGSGNYLMLT 655
Query: 1241 HNQTVMIHPNSSLF--EELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY 1293
H Q +HP SS + P WVL+HE + +R V+EI +E+AP YY
Sbjct: 656 HRQVAKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRVVSEISPHLFVELAPQYY 710
Score = 220 (82.5 bits), Expect = 3.5e-46, Sum P(2) = 3.5e-46
Identities = 44/138 (31%), Positives = 76/138 (55%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE---AGFTKDKMKIGCTQ 722
++ LP++ + ++++ HQ++I+ G+ +GK++Q+PQ+ E A + + C+Q
Sbjct: 69 RQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHCLAAGCRHGAAV-CSQ 127
Query: 723 PXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLA 782
+EM V +G EVGY + FE C + TI++Y TD L RE +S P L
Sbjct: 128 AHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAETILRYCTDDMLQREMMSAPLLN 187
Query: 783 SYSVMIIDEAHPKVYVID 800
SY V+I+D+ H + D
Sbjct: 188 SYGVIILDDVHERTVPTD 205
Score = 40 (19.1 bits), Expect = 7.4e-43, Sum P(3) = 7.4e-43
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 221 KASANQRAGVITGFNPLSDFRGCAHVLGEEVLRGCAHVLGEEVL 264
K +R G I+ + LS G + GE + C+ EVL
Sbjct: 476 KTHQTRRQGSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVL 519
Score = 38 (18.4 bits), Expect = 4.3e-27, Sum P(2) = 4.3e-27
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 669 LPIYPFKQDLI 679
+P+YP + DLI
Sbjct: 319 VPLYPTRNDLI 329
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 402 (146.6 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 94/240 (39%), Positives = 138/240 (57%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T G L R EP L Y V+I+DE HER LH D L G+++ ++ R DLK+++ SAT+
Sbjct: 255 LTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATV 314
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKA---PEADYIDAC----VVSILQ-IHATQP 112
+ FS +F APV ++PGR FP+ + Y P A ++ + +L+ I + P
Sbjct: 315 NTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYP 374
Query: 113 ---LGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
GD+LVFL+G EI E Q RR G ++LP++S L Q K+F P
Sbjct: 375 PEERGDLLVFLSGLAEIGAVLEAAQAHARRSG----RWVVLPLHSTLSVAAQDKVFDVAP 430
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
P RK +L+TNIAETS+TID I +V+D G K+ +++ + ++ L IS+ASA QR G
Sbjct: 431 PGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 490
Score = 263 (97.6 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 73/241 (30%), Positives = 116/241 (48%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+V+D G K+ +++ + ++ L IS+ASA Q CFRLY Y
Sbjct: 454 FVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYD-AF 512
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEI+R+ L VL +K++ + D F F++PPP +L A+ L GAL+
Sbjct: 513 APYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLETAILYLRDQGALDGSEA 572
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +G +A+ P+D ++GKML+ E ++TIA+ LSV F R + A
Sbjct: 573 LTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALSVQSP-FTRSTRS--NPKCA 629
Query: 977 RKNFFMLGGDHLVLLNIYNQWAD--ADFSTQ---WCYENFIQHRSMKRARDVREQLIGLV 1031
+ GD L N++N W +D ST+ WC I+ + ++R Q L+
Sbjct: 630 WRALESDHGDPFTLFNVFNNWVQVKSDRSTKSRRWCRREGIEEHRLYEMANLRRQFKELL 689
Query: 1032 Q 1032
+
Sbjct: 690 E 690
Score = 242 (90.2 bits), Expect = 4.9e-38, Sum P(2) = 4.9e-38
Identities = 49/134 (36%), Positives = 75/134 (55%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++ + +LPI ++ ++ +++HQV+++ G+TG GK+TQ+PQYL AGF+ + CT
Sbjct: 155 LQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACT 210
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP E + G +VGY IRFE S T I ++T G L R EP L
Sbjct: 211 QPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPTL 270
Query: 782 ASYSVMIIDEAHPK 795
Y V+I+DE H +
Sbjct: 271 PQYRVLIVDEVHER 284
Score = 68 (29.0 bits), Expect = 8.2e-35, Sum P(2) = 8.2e-35
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 1135 TNKKMPKTLGKSRAELGGDHLVLLNIYNQWAD--ADFSTQ---WCYENFIQHRSMKRARD 1189
+ + PK ++ GD L N++N W +D ST+ WC I+ + +
Sbjct: 621 STRSNPKCAWRALESDHGDPFTLFNVFNNWVQVKSDRSTKSRRWCRREGIEEHRLYEMAN 680
Query: 1190 VREQLIGLVQ 1199
+R Q L++
Sbjct: 681 LRRQFKELLE 690
Score = 39 (18.8 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 602 WEDEQMS---SAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNR--DKGEEEMTEKQ 656
W + Q++ SA+ R+ A + Q+E +D Q+ QA R D EEE Q
Sbjct: 922 WLELQLADGESAV-RLLAATLRLRAQWESAMDGQL--AQARRRRRQRLDDNEEEEAAPGQ 978
Query: 657 KKKLNIEETKKSL 669
++++ + +K+ L
Sbjct: 979 REEVVVALSKELL 991
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 564 (203.6 bits), Expect = 2.9e-55, Sum P(2) = 2.9e-55
Identities = 120/327 (36%), Positives = 185/327 (56%)
Query: 813 TGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNA 872
+G+E L V +SK A Q C+RLYT ++ + + TVPEIQR NL +
Sbjct: 160 SGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KFDKMTVPEIQRCNLASV 218
Query: 873 VLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD---LTKLGRRMAEFPL 929
+L L A+ + +++ FDF+ P + + A+ QL LGAL H D LT +GR+MA FPL
Sbjct: 219 MLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPL 278
Query: 930 DPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLV 989
+P K +L S K+ C EEI+TI S+LSV+ ++ + P + RK F GDH+
Sbjct: 279 EPKFAKTILMSPKFHCTEEILTIVSLLSVD-SVLHNPPSRREEVQGVRKKFISSEGDHMT 337
Query: 990 LLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIR 1049
LLNIY + + + WC ENF+ ++M +VR QL + ++ M + S+ + ++R
Sbjct: 338 LLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVR 397
Query: 1050 KAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQ 1109
+ + F A+L G+Y T +Q V IHP+S LF P V+Y EL++T K +MR
Sbjct: 398 RCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRD 457
Query: 1110 VTEIESKWLLEVAPHYYKPRELEDSTN 1136
+ I+++WL E AP Y++ R+L + N
Sbjct: 458 LCVIDAQWLYEAAPEYFR-RKLRTARN 483
Score = 277 (102.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 54/152 (35%), Positives = 88/152 (57%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
GDH+ LLNIY + + + WC ENF+ ++M +VR QL + ++ M + S+ +
Sbjct: 333 GDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGD 392
Query: 1212 TVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTK 1271
++R+ + F A+L G+Y T +Q V IHP+S LF P V+Y EL++T K
Sbjct: 393 VESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNK 452
Query: 1272 EFMRQVTEIESKWLLEVAPHYYKPRELEDSTN 1303
+MR + I+++WL E AP Y++ R+L + N
Sbjct: 453 CYMRDLCVIDAQWLYEAAPEYFR-RKLRTARN 483
Score = 45 (20.9 bits), Expect = 2.9e-55, Sum P(2) = 2.9e-55
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 662 IEETKKSLPIYPFKQDLIDAVR--DHQVLIIEGETGSGKTTQIPQYLHEAG 710
+E ++SLPI+ + L+ +R D+ VLI GS T P H AG
Sbjct: 67 VELQRRSLPIFQARGQLLAQLRNLDNAVLI-----GSPFFTGHPGVPHWAG 112
Score = 44 (20.5 bits), Expect = 3.7e-55, Sum P(2) = 3.7e-55
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 209 TGMESLTVVPISKASANQRAG 229
+G+E L V +SK A QR G
Sbjct: 160 SGLEVLAVQRVSKTQAWQRTG 180
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 387 (141.3 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 90/240 (37%), Positives = 140/240 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T G L R+ EP L Y V+I+DE HER LH D L G+++ ++ R DLK+++ SAT+
Sbjct: 255 LTVGLLLRQMQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATI 314
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKA---P---EADYIDAC-VVSILQI----HA 109
+ FS +F +APV ++PGR FP+ + Y P +++ +D + +L+ +
Sbjct: 315 NISLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYP 374
Query: 110 TQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
+ GD+LVFL+G EI E Q S + ++LP++S L Q K+F P
Sbjct: 375 PEERGDLLVFLSGMAEISAVLEPAQ----AYASHTQRWVVLPLHSALSVADQDKVFDVAP 430
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
P RK +L+TNIAETS+TID I +V+D G K+ +++ + ++ L IS+ASA QR G
Sbjct: 431 PGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 490
Score = 277 (102.6 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 72/241 (29%), Positives = 114/241 (47%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+V+D G K+ +++ + ++ L IS+ASA Q CFRLY Y
Sbjct: 454 FVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYD-AF 512
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEI+R+ L VL +K++ + D F F++PPP +L A+ L GAL+
Sbjct: 513 APYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLETAILYLRDQGALDSSEA 572
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
LT +G +A+ P+D ++GKML+ + E ++TIA+ LSV F R
Sbjct: 573 LTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQTP-FTRSAQSNPECAAT 631
Query: 977 RKNFFMLGGDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLV 1031
R+ GD LLN++N W S +WC I+ + ++R Q L+
Sbjct: 632 RRPLESDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGIEEHRLYEMANLRRQFKELL 691
Query: 1032 Q 1032
+
Sbjct: 692 E 692
Score = 235 (87.8 bits), Expect = 8.2e-39, Sum P(2) = 8.2e-39
Identities = 48/134 (35%), Positives = 74/134 (55%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++ + +LPI + ++ +++HQV+++ G+TG GK+TQ+PQYL AG + + CT
Sbjct: 155 LQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCSH----VACT 210
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP E + G +VGY IRFE S T I ++T G L R+ EP L
Sbjct: 211 QPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREPSL 270
Query: 782 ASYSVMIIDEAHPK 795
Y V+I+DE H +
Sbjct: 271 PQYQVLIVDEVHER 284
Score = 62 (26.9 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 1152 GDHLVLLNIYNQWADADF-----STQWCYENFIQHRSMKRARDVREQLIGLVQ 1199
GD LLN++N W S +WC I+ + ++R Q L++
Sbjct: 640 GDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGIEEHRLYEMANLRRQFKELLE 692
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 493 (178.6 bits), Expect = 4.6e-55, Sum P(2) = 4.6e-55
Identities = 122/342 (35%), Positives = 189/342 (55%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K F +R G++SL V PISK++A Q +C+RLYT Y
Sbjct: 482 YVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLALD 541
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E NT PEI R +L A+L +KA G++++I F FL PP E L AL QL ++ AL+ G
Sbjct: 542 EVNT-PEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEALDETGK 600
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKY--KCVEEIVTIASMLSVNGAIFYRP--KDKIIH 972
+++ G +A+ PL P +G++LLA+ + C+ +++ I S LSV IF ++K
Sbjct: 601 ISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVEN-IFLNTTSEEKKEA 659
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQ-WCYENFIQHRSMKRARDVREQLIGLV 1031
A+ AR++ + GDHL +L +A + + W + + HR+M+ DVR+QL
Sbjct: 660 AEAARRDLYRREGDHLTMLATVRAYASENTDRKAWAERHLVSHRAMQSVMDVRKQLTA-- 717
Query: 1032 QRVEMELVSNPTET-------------VNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTV 1078
Q + +L+ +PTE+ V I K+ G+ + A+L GSY+T NQTV
Sbjct: 718 QCRQAKLLPSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGSYRTVVGNQTV 777
Query: 1079 MIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLE 1120
IHP+S LF + +LY+E VFT + + R V+ ++ W+ E
Sbjct: 778 AIHPSSVLFGKKVEAILYNEFVFTNRSYARGVSAVQMDWVGE 819
Score = 364 (133.2 bits), Expect = 5.6e-54, Sum P(3) = 5.6e-54
Identities = 81/212 (38%), Positives = 120/212 (56%)
Query: 70 DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPL-GDILVFLTGQEEIET 128
D V I GR+FPV Y+ P D++DA + I QIH +P+ GDILVFLTGQE +E
Sbjct: 358 DGIAVCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEA 417
Query: 129 CNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTI 188
++ + + + ++ +LP+++ LP Q ++F+P PP RK++LATNIAETS+T+
Sbjct: 418 LENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTV 477
Query: 189 DNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDFRGCAHVLG 248
+ YV+D G K F +R G++SL V PISK++A QR G P C +
Sbjct: 478 SGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQ----CYRLYT 533
Query: 249 EEVLRGCAHVLGEEVLRPEVSQPFRSFGYLGV 280
E+ V E+LR ++SQ + GV
Sbjct: 534 EKDYLALDEVNTPEILRCDLSQAILNMKARGV 565
Score = 200 (75.5 bits), Expect = 5.6e-54, Sum P(3) = 5.6e-54
Identities = 53/172 (30%), Positives = 90/172 (52%)
Query: 1133 DSTNKKMPKTLGKSRAEL---GGDHLVLLNIYNQWADADFSTQ-WCYENFIQHRSMKRAR 1188
++T+++ + +R +L GDHL +L +A + + W + + HR+M+
Sbjct: 650 NTTSEEKKEAAEAARRDLYRREGDHLTMLATVRAYASENTDRKAWAERHLVSHRAMQSVM 709
Query: 1189 DVREQLIGLVQRVEMELVSNPTET-------------VNIRKAITAGYFYHIAKLSKSGS 1235
DVR+QL Q + +L+ +PTE+ V I K+ G+ + A+L GS
Sbjct: 710 DVRKQLTA--QCRQAKLLPSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGS 767
Query: 1236 YKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLE 1287
Y+T NQTV IHP+S LF + +LY+E VFT + + R V+ ++ W+ E
Sbjct: 768 YRTVVGNQTVAIHPSSVLFGKKVEAILYNEFVFTNRSYARGVSAVQMDWVGE 819
Score = 157 (60.3 bits), Expect = 4.6e-55, Sum P(2) = 4.6e-55
Identities = 45/139 (32%), Positives = 65/139 (46%)
Query: 686 QVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGC---TQPXXXXXXXXXXXXXEEMGVK 742
Q L+ E KTT + E G K+ + GC TQP EEMG
Sbjct: 182 QFLVDESWCRPTKTTIV----QENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTP 237
Query: 743 LGC-----EVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVY 797
LG +VGY++RF+ S T +K++T+G L +E L +P L YS +++DE H +
Sbjct: 238 LGSSSPASKVGYSVRFDTSVSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGV 297
Query: 798 VID--PGFCKQNNFNSRTG 814
+D GF + R G
Sbjct: 298 NVDLVMGFLRNLVSGKREG 316
Score = 132 (51.5 bits), Expect = 5.6e-54, Sum P(3) = 5.6e-54
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD------LKLL 54
+T+G L +E L +P L YS +++DE HER ++ D++ G ++++V + + LK +
Sbjct: 266 LTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGGVPLKAV 325
Query: 55 ISSATLDAQKFSEFF 69
+ SAT D + EFF
Sbjct: 326 VMSATADMESLQEFF 340
Score = 120 (47.3 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 647 KGEEE-MTEKQKKKLN-IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
K EE T KKK + E +K+LPI+ ++ +R + V+++ GETGSGK+TQIPQ
Sbjct: 123 KDEENGRTASLKKKAQMLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQ 182
Query: 705 YL 706
+L
Sbjct: 183 FL 184
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 554 (200.1 bits), Expect = 4.4e-54, Sum P(2) = 4.4e-54
Identities = 118/327 (36%), Positives = 183/327 (55%)
Query: 813 TGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNA 872
+G+E L V +SK A Q C+RLYT + + E PEIQR NL +
Sbjct: 152 SGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFD-KFEKMAAPEIQRCNLASV 210
Query: 873 VLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD---LTKLGRRMAEFPL 929
+L L A+ + +++ FDF+ P + + A+ QL LGAL H D LT +GR+MA FPL
Sbjct: 211 MLQLLAMKVPNVLTFDFMSRPSPDHIEAAIAQLDLLGALEHKDDQLALTPIGRKMAAFPL 270
Query: 930 DPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLV 989
+P K +L S K+ C EEI+TI S+LSV+ ++ Y P + + RK F GDH+
Sbjct: 271 EPKFAKTILLSSKFHCTEEILTIVSLLSVD-SVLYNPPARRDEVQSVRKKFISSEGDHIT 329
Query: 990 LLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIR 1049
LLNIY + + + WC ENF+ ++M +VR QL + ++ M ++S+ + ++R
Sbjct: 330 LLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLRDICLKMSMPIMSSRGDMESVR 389
Query: 1050 KAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQ 1109
+ + F A+L G+Y T +Q V IHP+S LF P V+Y L++T K +MR
Sbjct: 390 RCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRD 449
Query: 1110 VTEIESKWLLEVAPHYYKPRELEDSTN 1136
+ ++++WL E AP Y++ R+L + N
Sbjct: 450 LCVVDAEWLYEAAPDYFR-RKLRTARN 475
Score = 273 (101.2 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 59/186 (31%), Positives = 96/186 (51%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
LL V Y P D K + GDH+ LLNIY + + + WC EN
Sbjct: 296 LLSVDSVLYNPPARRDEVQSVRKKFISSE-----GDHITLLNIYRTFKNIGGNKDWCKEN 350
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYK 1237
F+ ++M +VR QL + ++ M ++S+ + ++R+ + F A+L G+Y
Sbjct: 351 FVNSKNMLLVAEVRAQLRDICLKMSMPIMSSRGDMESVRRCLAHSLFMSTAELQPDGTYA 410
Query: 1238 TAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRE 1297
T +Q V IHP+S LF P V+Y L++T K +MR + ++++WL E AP Y++ R+
Sbjct: 411 TTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR-RK 469
Query: 1298 LEDSTN 1303
L + N
Sbjct: 470 LRTARN 475
Score = 44 (20.5 bits), Expect = 4.4e-54, Sum P(2) = 4.4e-54
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 209 TGMESLTVVPISKASANQRAG 229
+G+E L V +SK A QR G
Sbjct: 152 SGLEVLAVQRVSKTQAWQRTG 172
Score = 42 (19.8 bits), Expect = 7.1e-54, Sum P(2) = 7.1e-54
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 662 IEETKKSLPIYPFKQDLIDAVR--DHQVLIIE 691
+E ++SLPI+ + L+ +R D+ VLI E
Sbjct: 58 LELQRRSLPIFRARGQLLAQLRNLDNAVLIGE 89
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 387 (141.3 bits), Expect = 4.3e-53, Sum P(2) = 4.3e-53
Identities = 113/375 (30%), Positives = 182/375 (48%)
Query: 794 PKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAY 852
P + +VID G ++ ++ + ES + P+SK A C LY
Sbjct: 336 PSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLRAAGIPPGSCLCLYPKSFL 395
Query: 853 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN 912
+ E P + NL + +L+LK I + FLD P E L+ ALE L L AL+
Sbjct: 396 ELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLDRPAPEALMQALEDLDYLAALD 455
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
GDL+ LG ++EFPL P + K LLAS ++ CV+E++T+A+ML+ F RP +
Sbjct: 456 DDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPP---VC 511
Query: 973 ADTA--RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
A+ A R+ + GDH L+ +Y + + WC + ++ +AR +R +L+ L
Sbjct: 512 AEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLEL 571
Query: 1031 VQRVEMELVSNPT-----ETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS 1084
+QR+E+ L S P +++KA+ +GYF +A+ +G+Y H + PN
Sbjct: 572 MQRIELPL-SQPAFGSERNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPNC 630
Query: 1085 SLFEEL-----PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDST 1135
P WVLYH + + V+EI+ + L+E+AP Y+ P E D
Sbjct: 631 CYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDFL 690
Query: 1136 NK-KMPKTLGKSRAE 1149
N+ + +T R+E
Sbjct: 691 NQLREERTDSSIRSE 705
Score = 248 (92.4 bits), Expect = 4.3e-53, Sum P(2) = 4.3e-53
Identities = 71/239 (29%), Positives = 122/239 (51%)
Query: 3 DGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS---DLKLLISSAT 59
D L +E S + V+I+DEA ER++ +D+L GL++D R S DL++++ +
Sbjct: 148 DRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRD-ARLGSLPGDLRVVVVTDP 206
Query: 60 LDAQKFSEFFDDAPVFRIPGRR--FPVDIYYTKAPEADYIDACVVSILQIHATQPLGDIL 117
K +F+ P +P + P +Y P AD +DA ++L+ + GD+L
Sbjct: 207 SLEPKLQDFWGGPPTVCVPRKTGSCPTPVYRDSLP-ADRVDAACQAVLEWCQEEAPGDVL 265
Query: 118 VFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVL 177
V+L +EEI C E L +VR L ++ +LP++ +Q ++ T ARKVV+
Sbjct: 266 VYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVV 324
Query: 178 ATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNP 236
+A+ S ++ +I +VID G ++ ++ + ES + P+SK A R G P
Sbjct: 325 THWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLRAAGIPP 383
Score = 191 (72.3 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 55/215 (25%), Positives = 98/215 (45%)
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
+L AP + +P + L ++ + GDH L+ +Y + + WC
Sbjct: 498 MLTAAPGFTRPPVCAEEA------ALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQAR 551
Query: 1178 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPT-----ETVNIRKAITAGYFYHIAK-LS 1231
+ ++ +AR +R +L+ L+QR+E+ L S P +++KA+ +GYF +A+
Sbjct: 552 GLNWAALCQARKLRGELLELMQRIELPL-SQPAFGSERNRRDLQKALVSGYFLKVARDTD 610
Query: 1232 KSGSYKTAKHNQTVMIHPNSSLFEEL-----PRWVLYHELVFTTKEFMRQVTEIESKWLL 1286
+G+Y H + PN P WVLYH + + V+EI+ + L+
Sbjct: 611 GTGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLV 670
Query: 1287 EVAPHYY----KPRELEDSTNK-KMPKTLGKSRAE 1316
E+AP Y+ P E D N+ + +T R+E
Sbjct: 671 ELAPPYFLSNLPPSESRDFLNQLREERTDSSIRSE 705
Score = 186 (70.5 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 53/172 (30%), Positives = 83/172 (48%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQ--VLIIEGETGSGKTTQIPQYLHE----AGFTKDKMK 717
E ++SLP++ + ++ + V+++ GE G GK+TQIPQ+ E GF K +
Sbjct: 40 EQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQKGWVT 99
Query: 718 IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS 777
+ TQP +EM + LG EVGY+I EDCT T++++ D L +E S
Sbjct: 100 V--TQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVAS 157
Query: 778 EPDLASYSVMIIDEAHPKVYVID--PGFCKQNNFNSRTGMESLTVVPISKAS 827
+ V+I+DEA + D G + S G L VV ++ S
Sbjct: 158 TRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPG--DLRVVVVTDPS 207
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 401 (146.2 bits), Expect = 5.3e-53, Sum P(2) = 5.3e-53
Identities = 110/356 (30%), Positives = 173/356 (48%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+VID G ++ +N R ES + ISK A C RLY+ E
Sbjct: 338 HVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPPGTCLRLYSKSTLDLEA 397
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
P++ NL + VL+LK I + FLD P E L+ ALE L L AL+ GD
Sbjct: 398 PPLPHPKVCEENLSSLVLLLKRKQIAEPGECHFLDRPAPEALMQALEDLDYLAALDDDGD 457
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
L+ LG ++EFPL P + K LLAS ++ CV+E++T+A+ML+ F RP + + A
Sbjct: 458 LSDLGIILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPP--LCAGEAA 514
Query: 977 -RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVE 1035
R+ GDH L+ +Y + + WC + ++ +AR +R +L+ L+QR+E
Sbjct: 515 LRRGLEHADGDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAELLELMQRIE 574
Query: 1036 MEL----VSNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHP-----NSS 1085
+ L + +++KA+ +GYF +A+ +G+Y H + P N
Sbjct: 575 LPLSLPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCVYRNRR 634
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNK 1137
+ P WVLYH + + V+EI+ + L+E+AP Y+ P E D N+
Sbjct: 635 TPAQPPTWVLYHRFSISKDNCLCTVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQ 690
Score = 232 (86.7 bits), Expect = 5.3e-53, Sum P(2) = 5.3e-53
Identities = 69/235 (29%), Positives = 120/235 (51%)
Query: 8 REFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS---DLKLLISSATLDAQK 64
+E S ++SV+++DEA ER++ +D+L GL++D R R+ D +++I + + K
Sbjct: 150 QEVASTRGPGAWSVLVLDEAQERSVASDLLQGLLRD-TRLRNLPGDPRVVIVTDSALEPK 208
Query: 65 FSEFFDDAPVFRIPGR--RFPVDIYYTKAPEADYIDACVVSILQI-HATQPLGDILVFLT 121
F F+ ++P +P P Y P AD ++A ++L++ + GD+LV+L
Sbjct: 209 FQAFWGNSPTVHVPREPGENPTLTYKDTVP-ADLVEAACQAVLELCQREEAPGDVLVYLP 267
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNI 181
+EEI C E L + L +LP++ +QT ++ T + RK+V+ +
Sbjct: 268 SEEEISLCCESLSREMGMLAVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSVRKIVVTHWL 326
Query: 182 AETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNP 236
A+ S ++ I +VID G ++ +N R ES + ISK A R GF P
Sbjct: 327 ADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPP 381
Score = 186 (70.5 bits), Expect = 3.6e-48, Sum P(2) = 3.6e-48
Identities = 45/164 (27%), Positives = 80/164 (48%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQ--VLIIEGETGSGKTTQIPQYLHEAGFTKDKM--KIG 719
E +++LPI+ + ++ + V+++ GE GSGK+TQIPQ+ E + ++
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQTGQVT 96
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
TQP +EM + LG E+GY+I EDCT T++++ D +E S
Sbjct: 97 VTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTR 156
Query: 780 DLASYSVMIIDEAHPKVYVID--PGFCKQNNFNSRTGMESLTVV 821
++SV+++DEA + D G + + G + +V
Sbjct: 157 GPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVIV 200
Score = 186 (70.5 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 45/167 (26%), Positives = 80/167 (47%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL----VS 1207
GDH L+ +Y + + WC + ++ +AR +R +L+ L+QR+E+ L
Sbjct: 524 GDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAELLELMQRIELPLSLPAFG 583
Query: 1208 NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHP-----NSSLFEELPRWV 1261
+ +++KA+ +GYF +A+ +G+Y H + P N + P WV
Sbjct: 584 SEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCVYRNRRTPAQPPTWV 643
Query: 1262 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNK 1304
LYH + + V+EI+ + L+E+AP Y+ P E D N+
Sbjct: 644 LYHRFSISKDNCLCTVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQ 690
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 249 (92.7 bits), Expect = 7.7e-53, Sum P(4) = 7.7e-53
Identities = 63/192 (32%), Positives = 105/192 (54%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQX 831
R+ + ++A SV I P + YVID G K F+ G L V ISK SA Q
Sbjct: 426 RKVILSTNIAETSVTI-----PNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQR 480
Query: 832 XXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLD 891
+ +R+YT Y++ + +PEI R +L L LKA+ IN+ + F+F +
Sbjct: 481 SGRAGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPE 539
Query: 892 PPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVT 951
P E V + + L+ + A++ + +LT LG+++ FPL+P+ +LL S ++ C++EI T
Sbjct: 540 NPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIAT 599
Query: 952 IASMLSVNGAIF 963
I ++L+ + +IF
Sbjct: 600 IVALLNCD-SIF 610
Score = 234 (87.4 bits), Expect = 7.7e-53, Sum P(4) = 7.7e-53
Identities = 44/108 (40%), Positives = 70/108 (64%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +++P L Y +I+DE HER++ TD+L G K +++ R +K+++ SAT
Sbjct: 121 VTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATF 180
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH 108
D F++FF++ P+ IP + + IYY + DYI + V +ILQIH
Sbjct: 181 DINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 210 (79.0 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 48/87 (55%), Positives = 56/87 (64%)
Query: 143 KIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQ 202
KI + IL +YS+LP Q IF P PPN RKV+L+TNIAETS+TI NI YVID G K
Sbjct: 396 KIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKI 455
Query: 203 NNFNSRTGMESLTVVPISKASANQRAG 229
F+ G L V ISK SA QR+G
Sbjct: 456 KYFDVNRGSNVLRVTQISKDSAIQRSG 482
Score = 168 (64.2 bits), Expect = 7.7e-53, Sum P(4) = 7.7e-53
Identities = 44/162 (27%), Positives = 86/162 (53%)
Query: 967 KDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQ--WCYENFIQHRSMKRARDVR 1024
K+K+I+ AR+ GDHL LL+I+ W +AD + +C + + +++ ++
Sbjct: 697 KNKLINV--ARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIK 754
Query: 1025 EQLIGLVQ---RVEMELVSNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMI 1080
QL+ +++ ++E+ + + I + F++IAK S + Y + + I
Sbjct: 755 IQLLEIMKNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRI 814
Query: 1081 HPNSSLFEEL--PRWVLYHELVFTTKEFMRQVTEIESKWLLE 1120
HP+S+LF P ++ Y ++V T + + R VT+IE+ WLL+
Sbjct: 815 HPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLK 856
Score = 161 (61.7 bits), Expect = 4.1e-52, Sum P(4) = 4.1e-52
Identities = 46/170 (27%), Positives = 88/170 (51%)
Query: 1132 EDSTNKKMP---KTLGKSRAEL---GGDHLVLLNIYNQWADADFSTQ--WCYENFIQHRS 1183
+D KKM K + +R +L GDHL LL+I+ W +AD + +C + +
Sbjct: 687 DDMGEKKMNDKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEI 746
Query: 1184 MKRARDVREQLIGLVQ---RVEMELVSNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTA 1239
+++ ++ QL+ +++ ++E+ + + I + F++IAK S + Y
Sbjct: 747 LQQVEKIKIQLLEIMKNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINL 806
Query: 1240 KHNQTVMIHPNSSLFEEL--PRWVLYHELVFTTKEFMRQVTEIESKWLLE 1287
+ + IHP+S+LF P ++ Y ++V T + + R VT+IE+ WLL+
Sbjct: 807 VNKTKIRIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLK 856
Score = 135 (52.6 bits), Expect = 1.4e-45, Sum P(4) = 1.4e-45
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 713 KDKMKIGCTQPXXXXXXXXXXXXXEEMGV-KLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
K+K K+ + P +EM +G VGY IRF++ S++T IK++TDG L
Sbjct: 67 KEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGIL 126
Query: 772 HREFLSEPDLASYSVMIIDEAHPK 795
RE +++P L Y +I+DE H +
Sbjct: 127 IREIMNDPLLKKYKFLILDEIHER 150
Score = 118 (46.6 bits), Expect = 1.4e-45, Sum P(4) = 1.4e-45
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 667 KSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK 717
+ LPI +K ++ ++ + ++II+GETG GKTTQ+PQ ++E F K + K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKK 52
Score = 89 (36.4 bits), Expect = 7.7e-53, Sum P(4) = 7.7e-53
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 113 LGDILVFLTGQEEIETCNEILQDRVRRL--GSKIKELIILPVYSNLPTDMQTKI 164
LGDILVFL GQEEIE N +L+++++ + G+ + +L+ N D Q KI
Sbjct: 316 LGDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLNKLMKERNNYNNQNDFQNKI 369
Score = 49 (22.3 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVA 474
D+D+D D+ K DKN NVA
Sbjct: 677 DNDNDSNNNDDDMGEKKMNDKNKLINVA 704
Score = 43 (20.2 bits), Expect = 4.5e-48, Sum P(4) = 4.5e-48
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 447 DSDDDRKER--DEFSERLKNRDKN--NTKNVATSRQD 479
++DDD +E +E +E K+ ++N N N D
Sbjct: 239 ENDDDHRENKPNELNELNKSNEQNELNESNEVNKEHD 275
Score = 38 (18.4 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 646 DKGEEEMTEKQKKKLNIEETK 666
D GE++M +K K +N+ K
Sbjct: 688 DMGEKKMNDKNKL-INVARRK 707
Score = 37 (18.1 bits), Expect = 3.2e-37, Sum P(4) = 3.2e-37
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 645 RDKGEEEMTEKQKKKLNI 662
+ K +E+ K+KKK+ I
Sbjct: 57 KHKNDEKKKRKEKKKMLI 74
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 249 (92.7 bits), Expect = 7.7e-53, Sum P(4) = 7.7e-53
Identities = 63/192 (32%), Positives = 105/192 (54%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQX 831
R+ + ++A SV I P + YVID G K F+ G L V ISK SA Q
Sbjct: 426 RKVILSTNIAETSVTI-----PNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQR 480
Query: 832 XXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLD 891
+ +R+YT Y++ + +PEI R +L L LKA+ IN+ + F+F +
Sbjct: 481 SGRAGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPE 539
Query: 892 PPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVT 951
P E V + + L+ + A++ + +LT LG+++ FPL+P+ +LL S ++ C++EI T
Sbjct: 540 NPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIAT 599
Query: 952 IASMLSVNGAIF 963
I ++L+ + +IF
Sbjct: 600 IVALLNCD-SIF 610
Score = 234 (87.4 bits), Expect = 7.7e-53, Sum P(4) = 7.7e-53
Identities = 44/108 (40%), Positives = 70/108 (64%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE +++P L Y +I+DE HER++ TD+L G K +++ R +K+++ SAT
Sbjct: 121 VTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATF 180
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIH 108
D F++FF++ P+ IP + + IYY + DYI + V +ILQIH
Sbjct: 181 DINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 210 (79.0 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 48/87 (55%), Positives = 56/87 (64%)
Query: 143 KIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQ 202
KI + IL +YS+LP Q IF P PPN RKV+L+TNIAETS+TI NI YVID G K
Sbjct: 396 KIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKI 455
Query: 203 NNFNSRTGMESLTVVPISKASANQRAG 229
F+ G L V ISK SA QR+G
Sbjct: 456 KYFDVNRGSNVLRVTQISKDSAIQRSG 482
Score = 168 (64.2 bits), Expect = 7.7e-53, Sum P(4) = 7.7e-53
Identities = 44/162 (27%), Positives = 86/162 (53%)
Query: 967 KDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQ--WCYENFIQHRSMKRARDVR 1024
K+K+I+ AR+ GDHL LL+I+ W +AD + +C + + +++ ++
Sbjct: 697 KNKLINV--ARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIK 754
Query: 1025 EQLIGLVQ---RVEMELVSNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMI 1080
QL+ +++ ++E+ + + I + F++IAK S + Y + + I
Sbjct: 755 IQLLEIMKNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRI 814
Query: 1081 HPNSSLFEEL--PRWVLYHELVFTTKEFMRQVTEIESKWLLE 1120
HP+S+LF P ++ Y ++V T + + R VT+IE+ WLL+
Sbjct: 815 HPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLK 856
Score = 161 (61.7 bits), Expect = 4.1e-52, Sum P(4) = 4.1e-52
Identities = 46/170 (27%), Positives = 88/170 (51%)
Query: 1132 EDSTNKKMP---KTLGKSRAEL---GGDHLVLLNIYNQWADADFSTQ--WCYENFIQHRS 1183
+D KKM K + +R +L GDHL LL+I+ W +AD + +C + +
Sbjct: 687 DDMGEKKMNDKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEI 746
Query: 1184 MKRARDVREQLIGLVQ---RVEMELVSNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTA 1239
+++ ++ QL+ +++ ++E+ + + I + F++IAK S + Y
Sbjct: 747 LQQVEKIKIQLLEIMKNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINL 806
Query: 1240 KHNQTVMIHPNSSLFEEL--PRWVLYHELVFTTKEFMRQVTEIESKWLLE 1287
+ + IHP+S+LF P ++ Y ++V T + + R VT+IE+ WLL+
Sbjct: 807 VNKTKIRIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLK 856
Score = 135 (52.6 bits), Expect = 1.4e-45, Sum P(4) = 1.4e-45
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 713 KDKMKIGCTQPXXXXXXXXXXXXXEEMGV-KLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
K+K K+ + P +EM +G VGY IRF++ S++T IK++TDG L
Sbjct: 67 KEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGIL 126
Query: 772 HREFLSEPDLASYSVMIIDEAHPK 795
RE +++P L Y +I+DE H +
Sbjct: 127 IREIMNDPLLKKYKFLILDEIHER 150
Score = 118 (46.6 bits), Expect = 1.4e-45, Sum P(4) = 1.4e-45
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 667 KSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK 717
+ LPI +K ++ ++ + ++II+GETG GKTTQ+PQ ++E F K + K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKK 52
Score = 89 (36.4 bits), Expect = 7.7e-53, Sum P(4) = 7.7e-53
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 113 LGDILVFLTGQEEIETCNEILQDRVRRL--GSKIKELIILPVYSNLPTDMQTKI 164
LGDILVFL GQEEIE N +L+++++ + G+ + +L+ N D Q KI
Sbjct: 316 LGDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLNKLMKERNNYNNQNDFQNKI 369
Score = 49 (22.3 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVA 474
D+D+D D+ K DKN NVA
Sbjct: 677 DNDNDSNNNDDDMGEKKMNDKNKLINVA 704
Score = 43 (20.2 bits), Expect = 4.5e-48, Sum P(4) = 4.5e-48
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 447 DSDDDRKER--DEFSERLKNRDKN--NTKNVATSRQD 479
++DDD +E +E +E K+ ++N N N D
Sbjct: 239 ENDDDHRENKPNELNELNKSNEQNELNESNEVNKEHD 275
Score = 38 (18.4 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 646 DKGEEEMTEKQKKKLNIEETK 666
D GE++M +K K +N+ K
Sbjct: 688 DMGEKKMNDKNKL-INVARRK 707
Score = 37 (18.1 bits), Expect = 3.2e-37, Sum P(4) = 3.2e-37
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 645 RDKGEEEMTEKQKKKLNI 662
+ K +E+ K+KKK+ I
Sbjct: 57 KHKNDEKKKRKEKKKMLI 74
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 375 (137.1 bits), Expect = 4.0e-51, Sum P(2) = 4.0e-51
Identities = 107/359 (29%), Positives = 169/359 (47%)
Query: 794 PKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAY 852
P + +VID G ++ +N R E + PISK A C LY
Sbjct: 334 PSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFL 393
Query: 853 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN 912
+ E P + NL + VL+LK I + FLD P E L+ ALE L L AL+
Sbjct: 394 ELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALD 453
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
GDL+ LG ++EFPL P + K LLAS ++ CV+E++T+A+ML+ F RP
Sbjct: 454 DDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPPLSAEE 512
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQ 1032
A R+ GDH L+ +Y + + WC + ++ +A +R +L+ L+Q
Sbjct: 513 A-ALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQ 571
Query: 1033 RVEMEL----VSNPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMI-----HP 1082
R+E+ L + +++KA+ +GYF +A+ +G+Y H + +
Sbjct: 572 RIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYR 631
Query: 1083 NSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNK 1137
+ P WVLYH + + V+EI+ + L+E+AP Y+ P E D N+
Sbjct: 632 SRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNQ 690
Score = 242 (90.2 bits), Expect = 4.0e-51, Sum P(2) = 4.0e-51
Identities = 72/239 (30%), Positives = 123/239 (51%)
Query: 3 DGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKD--IVRFRSDLKLLISSATL 60
D L +E S ++ V+++DEA ER++ +D L GL++D + + DL++++ +
Sbjct: 148 DRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPA 207
Query: 61 DAQKFSEFFDDAPVFRIP---GRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDIL 117
K F+ + P+ IP G R P IY+ P D ++A ++L++ + GD+L
Sbjct: 208 LEPKLRAFWGNPPIVHIPREPGER-PSPIYWDTIPP-DRVEAACQAVLELCRKELPGDVL 265
Query: 118 VFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVL 177
VFL +EEI C E L V L + +LP++ + +Q ++ +ARKVV+
Sbjct: 266 VFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA-VY--EDMDARKVVV 322
Query: 178 ATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNP 236
+A+ S ++ +I +VID G ++ +N R E + PISK A R GF P
Sbjct: 323 THWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPP 381
Score = 194 (73.4 bits), Expect = 4.5e-46, Sum P(2) = 4.5e-46
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQ--VLIIEGETGSGKTTQIPQYLHEAGFTK--DKMKIGCT 721
+++LPI+ + ++ + + V+++ GE GSGK+TQIPQ+ E + K ++ T
Sbjct: 42 RQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVT 101
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP +EM + LG EVGY+I EDCT T++++ D L +E S
Sbjct: 102 QPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGT 161
Query: 782 ASYSVMIIDEAHPKVYVID 800
++ V+++DEA + D
Sbjct: 162 GAWGVLVLDEAQERSVASD 180
Score = 167 (63.8 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 42/167 (25%), Positives = 78/167 (46%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL----VS 1207
GDH L+ +Y + + WC + ++ +A +R +L+ L+QR+E+ L
Sbjct: 524 GDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFG 583
Query: 1208 NPTETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMI-----HPNSSLFEELPRWV 1261
+ +++KA+ +GYF +A+ +G+Y H + + + P WV
Sbjct: 584 SEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWV 643
Query: 1262 LYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNK 1304
LYH + + V+EI+ + L+E+AP Y+ P E D N+
Sbjct: 644 LYHNFTISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNQ 690
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 419 (152.6 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 93/241 (38%), Positives = 146/241 (60%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L +E +P L+ YS++++DEAHER+L+ D + GL+K +++ R D +++ISSAT+
Sbjct: 103 MTDGILLQEMKLDPLLSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATI 162
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYY----------TKAPEADYIDACVVSILQIHAT 110
+ FS +F++ PV +I +PV + + TK EA ++ V + ++ A+
Sbjct: 163 NTAMFSRYFNECPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIAS 222
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLGSK--IKELIILPVYSNLPTDMQTKIFLPT 168
+ G IL+FL G+ I+ C + RL + ++L +LP+Y L + Q ++F
Sbjct: 223 RDKGAILIFLPGERSIKNC-------ITRLSHERWFRKLFLLPLYGRLSKEEQEQVFNRA 275
Query: 169 PPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRA 228
P RKVV+ATNIAETS+TID++ VID G K N++N + SL PIS+AS NQR
Sbjct: 276 PFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRR 335
Query: 229 G 229
G
Sbjct: 336 G 336
Score = 350 (128.3 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 96/354 (27%), Positives = 170/354 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VID G K N++N + SL PIS+AS NQ
Sbjct: 280 RKVVIATNIAETSITIDDVTT----VIDSGLVKLNSYNPLSYTASLDETPISQASCNQRR 335
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDP 892
C+RLY+ ++ E T+ EI R +L V+ + LGI+D HFDF+ P
Sbjct: 336 GRAGRVRAGTCYRLYSRDDFEQR-EPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISP 394
Query: 893 PPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLL-ASEKYK-CVEEIV 950
P ++ A + L LGAL L+++G+ M FPL P +M++ A +Y +++++
Sbjct: 395 PGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVL 454
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYEN 1010
A+ LS + + +D+ A F GD + L IY +A + +C
Sbjct: 455 IAAAFLSARSPLIFS-EDQEEKTKKAHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHF 513
Query: 1011 FIQHRSMKRARDVREQLIGLVQRVEMELVSNPT-ETVNIRKAITAGYFYHIAKLSKSGSY 1069
++ R M +++EQL +V + L++ T E I + G + SY
Sbjct: 514 YLDERIMAEISNIKEQLELIVSGMGFPLLTGGTVEEYLI--CVGTGMIQFVCVQEHRDSY 571
Query: 1070 KTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1123
++ + + IHP S ++++ P++++ E+V T++ + V+ + K +AP
Sbjct: 572 RSLTA-ECIHIHPGSCVYKDRPKFIVAGEIVRTSRMYAMSVSPLSKKIAELIAP 624
Score = 261 (96.9 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 57/135 (42%), Positives = 80/135 (59%)
Query: 667 KSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXX 726
K LP+Y K ++ A+ H V+++E TGSGKTTQ+P LHEAG+ + IG TQP
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGA-IGVTQPRRI 63
Query: 727 XXXXXXXXXXEE-MGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYS 785
++ + V+ G VGY +RFED T T IK MTDG L +E +P L+ YS
Sbjct: 64 AVLSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYS 122
Query: 786 VMIIDEAHPKVYVID 800
++++DEAH + ID
Sbjct: 123 IIMVDEAHERSLNID 137
Score = 120 (47.3 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 36/164 (21%), Positives = 73/164 (44%)
Query: 1128 PRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRA 1187
P + +K K G +G D + L IY +A + +C ++ R M
Sbjct: 465 PLIFSEDQEEKTKKAHGTFSDPMG-DFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEI 523
Query: 1188 RDVREQLIGLVQRVEMELVSNPT-ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVM 1246
+++EQL +V + L++ T E I + G + SY++ + +
Sbjct: 524 SNIKEQLELIVSGMGFPLLTGGTVEEYLI--CVGTGMIQFVCVQEHRDSYRSLTA-ECIH 580
Query: 1247 IHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP 1290
IHP S ++++ P++++ E+V T++ + V+ + K +AP
Sbjct: 581 IHPGSCVYKDRPKFIVAGEIVRTSRMYAMSVSPLSKKIAELIAP 624
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 398 (145.2 bits), Expect = 4.0e-40, Sum P(5) = 4.0e-40
Identities = 107/288 (37%), Positives = 159/288 (55%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L E + L Y +IIDEAHER+L+ D + G +K I+ R DLKL+I+SAT+
Sbjct: 195 MTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATI 254
Query: 61 DAQKFSEFFDD-----APVFRIPGRRFPVDIYYTKAPEADYID-----ACVVSILQ--IH 108
D Q+F++ F AP+ + GR FPV++ Y + ID V I+ +
Sbjct: 255 DPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILS 314
Query: 109 ATQPL-----GDILVFLTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQT 162
A L GDILVFL G+ EI +T +++ +R +LP+Y+ L Q
Sbjct: 315 AVDELSDCGNGDILVFLNGEREIRDTAAALVKANLRHTN-------VLPLYARLTVSEQN 367
Query: 163 KIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKA 222
+IF P + R +VLATN+AETSLT+ I YVIDPG + + ++ RT ++ L + P+S+A
Sbjct: 368 QIF--KPHSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQA 425
Query: 223 SANQRAGVITGFNPLSDFRG-CAHVLGEEVLRGCAHVLGEEVLRPEVS 269
SANQR+G +S+ G C + E+ + A E+LR ++
Sbjct: 426 SANQRSGRC---GRVSE--GICIRLYSEDDYKSRAEFTDPEILRTNLA 468
Score = 290 (107.1 bits), Expect = 1.9e-50, Sum P(4) = 1.9e-50
Identities = 81/265 (30%), Positives = 135/265 (50%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVIDPG + + ++ RT ++ L + P+S+ASANQ C RLY+ YK
Sbjct: 396 YVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRA 455
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETL---VLALEQLYALGAL-- 911
E T PEI R NL +L + AL + D+ +F F++ P + + V LE++ A+ ++
Sbjct: 456 EF-TDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVESIEN 514
Query: 912 ---NHHG-------DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGA 961
N G LTK GR +A+FP+DP + KM+++S ++ C+E+I+ I S LS+
Sbjct: 515 ADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDP 574
Query: 962 IFYRPKDKIIHADTARKNFFMLGGDHLVLLNIY---NQWADADFSTQW---CYENFIQHR 1015
RP +K +D F D + LLN++ N+ Q+ C F+ +
Sbjct: 575 R-ERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKKDLTQNQFRKLCQREFLSYV 633
Query: 1016 SMKRARDVREQLIGLVQRVEMELVS 1040
++ +D+ QL ++ ++ L S
Sbjct: 634 RLREWQDIFSQLKLTLKEQQITLTS 658
Score = 257 (95.5 bits), Expect = 1.9e-50, Sum P(4) = 1.9e-50
Identities = 66/157 (42%), Positives = 87/157 (55%)
Query: 654 EKQKKKLNIEETK--KSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF 711
+KQ+K ++ + + LPI + A+ +QV+II GETGSGKTTQIP+ E G
Sbjct: 82 DKQQKIRSLPKITYPEGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGR 141
Query: 712 TKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
D + IG TQP EE+G KLG +VGY +RF D SE++ IK MTDG L
Sbjct: 142 GVDGL-IGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGIL 200
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVID--PGFCKQ 806
E + L Y +IIDEAH + ID G+ KQ
Sbjct: 201 LAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQ 237
Score = 126 (49.4 bits), Expect = 1.9e-50, Sum P(4) = 1.9e-50
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 1048 IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFM 1107
+ +A+ +G HI + ++ YK A+ I P S+L ++ P+W++ ELV T++ F
Sbjct: 693 VHQALLSGLLSHIGQQDENREYKGAR-GMKFFIFPGSALTKKSPKWLMSAELVETSRLFA 751
Query: 1108 RQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLV 1156
R +I+ WL +A H K E KK + + L G +V
Sbjct: 752 RMNAKIDPLWLEPLAQHLVKRNYSEPHWEKKQGAVMAFEQVTLYGLSIV 800
Score = 122 (48.0 bits), Expect = 1.4e-49, Sum P(3) = 1.4e-49
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 1215 IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFM 1274
+ +A+ +G HI + ++ YK A+ I P S+L ++ P+W++ ELV T++ F
Sbjct: 693 VHQALLSGLLSHIGQQDENREYKGAR-GMKFFIFPGSALTKKSPKWLMSAELVETSRLFA 751
Query: 1275 RQVTEIESKWLLEVAPHYYKPRELEDSTNKK 1305
R +I+ WL +A H K E KK
Sbjct: 752 RMNAKIDPLWLEPLAQHLVKRNYSEPHWEKK 782
Score = 53 (23.7 bits), Expect = 1.9e-50, Sum P(4) = 1.9e-50
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 1156 VLLNIYNQWADADFST-QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1211
V LN+ D Q ++ F+ + + + D+ L G+++R+E +L S+P +
Sbjct: 1250 VPLNVIQSHGDIKQQCEQLVFKGFVTYSGLSKLDDIIRYLQGMLRRLE-KLPSDPNQ 1305
Score = 53 (23.7 bits), Expect = 1.2e-31, Sum P(4) = 1.2e-31
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 989 VLLNIYNQWADADFST-QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE 1044
V LN+ D Q ++ F+ + + + D+ L G+++R+E +L S+P +
Sbjct: 1250 VPLNVIQSHGDIKQQCEQLVFKGFVTYSGLSKLDDIIRYLQGMLRRLE-KLPSDPNQ 1305
Score = 49 (22.3 bits), Expect = 4.0e-40, Sum P(5) = 4.0e-40
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 617 KDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKL 660
K + E++ D DFI L+L ++ ++++T+ Q +KL
Sbjct: 581 KQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKKDLTQNQFRKL 624
Score = 42 (19.8 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 1124 HYYKPRELEDSTNKKMPKTLGKSRAELGGDHLV 1156
+++ P +++D + +P L E+G D L+
Sbjct: 933 YHFSPGDIDDGISVVLPIALLNQVQEVGFDWLI 965
Score = 38 (18.4 bits), Expect = 4.0e-40, Sum P(5) = 4.0e-40
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 448 SDDDRKERDEFSE 460
S+DD K R EF++
Sbjct: 447 SEDDYKSRAEFTD 459
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 296 (109.3 bits), Expect = 2.5e-48, Sum P(5) = 2.5e-48
Identities = 60/139 (43%), Positives = 87/139 (62%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMK---- 717
+EET+K LPI +Q++++A+ H +II G+TG GKTTQ+PQ+L+EAGF +
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293
Query: 718 -IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
IG TQP E+GV+LG EVG+ +R++ E + IK+MTDG L RE
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 777 SEPDLASYSVMIIDEAHPK 795
++ L YSV+I+DEAH +
Sbjct: 354 NDFLLRRYSVIILDEAHER 372
Score = 243 (90.6 bits), Expect = 2.5e-48, Sum P(5) = 2.5e-48
Identities = 51/142 (35%), Positives = 84/142 (59%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K N++S+TGMES V IS+ASA+Q C+RLY++ + +
Sbjct: 693 YVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIF 752
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E++++PEI ++ + +L++K++ I + +F F PP + A L AL AL+ +G
Sbjct: 753 EESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGG 812
Query: 917 LTKLGRRMAEFPLDPMMGKMLL 938
LT LG+ M+ +P+ P +MLL
Sbjct: 813 LTPLGKAMSHYPMSPRHSRMLL 834
Score = 193 (73.0 bits), Expect = 1.3e-35, Sum P(5) = 1.3e-35
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 146 ELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNF 205
+L +LP+Y+ L Q ++F R VV+ATN+AETSLTI I YV+D G K N+
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 206 NSRTGMESLTVVPISKASANQRAG 229
+S+TGMES V IS+ASA+QRAG
Sbjct: 706 DSKTGMESYEVDWISQASASQRAG 729
Score = 148 (57.2 bits), Expect = 5.2e-41, Sum P(5) = 5.2e-41
Identities = 35/95 (36%), Positives = 53/95 (55%)
Query: 51 LKLLISSATLDAQKF---SEFFDDAP-VFRIPGRRFPVDIYYTKAPE-ADYIDACVVSIL 105
LKL++ SATL + F F + P + +P R++PV I+++K E DYI ++
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 106 QIHATQPLGDILVFLTGQEEIETCNEILQDRVRRL 140
IH P G ILVF+TGQ E++ E L+ + L
Sbjct: 476 SIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
Score = 128 (50.1 bits), Expect = 5.2e-41, Sum P(5) = 5.2e-41
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD 50
MTDG L RE ++ L YSV+I+DEAHER+L+TDIL G++ +++ R +
Sbjct: 343 MTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE 392
Score = 112 (44.5 bits), Expect = 2.5e-48, Sum P(5) = 2.5e-48
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 1038 LVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYH 1097
L+ N E + +AI AG+ +A+ +++ Y+ + V +H SSL P ++Y
Sbjct: 1000 LLQNEEELLG--EAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYS 1057
Query: 1098 ELVFTTKEFMRQVTEIESKWLLEVA 1122
EL+ T + +M T + +WL++ A
Sbjct: 1058 ELLLTNRPYMHGATRVRPEWLVKHA 1082
Score = 112 (44.5 bits), Expect = 2.5e-48, Sum P(5) = 2.5e-48
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 1205 LVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYH 1264
L+ N E + +AI AG+ +A+ +++ Y+ + V +H SSL P ++Y
Sbjct: 1000 LLQNEEELLG--EAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYS 1057
Query: 1265 ELVFTTKEFMRQVTEIESKWLLEVA 1289
EL+ T + +M T + +WL++ A
Sbjct: 1058 ELLLTNRPYMHGATRVRPEWLVKHA 1082
Score = 49 (22.3 bits), Expect = 2.5e-48, Sum P(5) = 2.5e-48
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 965 RPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVR 1024
R KD+ AR F D L + + + ++ +C N + ++M ++
Sbjct: 895 RKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLK 954
Query: 1025 EQLIGLV 1031
+QL+ LV
Sbjct: 955 DQLLRLV 961
Score = 48 (22.0 bits), Expect = 2.5e-48, Sum P(5) = 2.5e-48
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 471 KNVATSR-QDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRRKYLEKRKEDKVAEL----E 525
KN +++ QDK + + + +S+++ L+K +EDK E+
Sbjct: 20 KNKGSNKMQDKLNSNNNTGSKKSRKRKLNSNVNTVACKSQKRKLKKLEEDKEKEILFSKT 79
Query: 526 ADILDDEYLFSE 537
A++LD +Y SE
Sbjct: 80 AELLD-KYKISE 90
Score = 42 (19.8 bits), Expect = 6.6e-35, Sum P(5) = 6.6e-35
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 617 KDREHQEQYELLLDNQIDFIQALSLPGN---RDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
K+ + + L+L + + ALSLP +GE++ K K +E K+
Sbjct: 841 KETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNESKDADKTVKQEDKQRKKD-- 898
Query: 674 FKQDLIDAVRD 684
+++ I A RD
Sbjct: 899 -RKEKIKAARD 908
Score = 42 (19.8 bits), Expect = 3.8e-22, Sum P(5) = 3.8e-22
Identities = 8/42 (19%), Positives = 24/42 (57%)
Query: 654 EKQKKKLNIEETKKSLPIYPFK---QDLIDAVRDHQVLIIEG 692
E+ KL +++T +P+ + +D +D + +++ + ++G
Sbjct: 177 EESSSKLEVDDTVDMIPLTTCRDDDEDSMDGLIENEDVTVQG 218
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 266 (98.7 bits), Expect = 3.6e-48, Sum P(4) = 3.6e-48
Identities = 56/139 (40%), Positives = 84/139 (60%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
I+E + LPI +Q +++A+ ++ +++I GETGSGKTTQ+PQ+L+EAG+T IG T
Sbjct: 235 IQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGIT 294
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+P +EM + V Y IR+E T++ T IK+MTDG L +E + L
Sbjct: 295 EPRRVAAVSMSQRVAKEMNLSHRV-VSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFLL 353
Query: 782 ASYSVMIIDEAHPKVYVID 800
+ Y V+IIDEAH + D
Sbjct: 354 SKYKVIIIDEAHERSMYTD 372
Score = 264 (98.0 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 62/142 (43%), Positives = 84/142 (59%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L+ Y V+IIDEAHER+++TDIL GL+ IV R LKL+I
Sbjct: 338 MTDGVLLKEVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIM 397
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F+E F PV ++ R+FPV +++ K P DY C + +IH
Sbjct: 398 SATLRVEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRML 457
Query: 112 PLGDILVFLTGQEEIET-CNEI 132
P G ILVFLTGQ E+ + C +
Sbjct: 458 PSGGILVFLTGQAEVHSLCRRL 479
Score = 234 (87.4 bits), Expect = 3.6e-48, Sum P(4) = 3.6e-48
Identities = 64/177 (36%), Positives = 91/177 (51%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ ++ TG+ S V IS+ASANQ C+RLY++ + +
Sbjct: 623 YVVDCGKVKKRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFM-DF 681
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHH-- 914
E + PEI + + + +L +KAL I +I+F F PPP E L A E L ALGAL
Sbjct: 682 EKFSAPEITKRPVEDLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPM 741
Query: 915 -GDLTK------------LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
G L + LGR MA FP+ P KML S ++ C+ +TI S ++V
Sbjct: 742 TGRLKEQQAAKLSCPISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTV 798
Score = 207 (77.9 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 44/83 (53%), Positives = 56/83 (67%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS L + Q K+F P PP R V+ATN+AETSLTI I YV+D G K+ ++
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 207 SRTGMESLTVVPISKASANQRAG 229
TG+ S V IS+ASANQRAG
Sbjct: 637 KITGVSSFRVTWISQASANQRAG 659
Score = 155 (59.6 bits), Expect = 3.6e-48, Sum P(4) = 3.6e-48
Identities = 42/120 (35%), Positives = 68/120 (56%)
Query: 1042 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1090
PTE +R+ + AG H+A+ ++ +YKTA + V IHP+S LF++L
Sbjct: 906 PTEAQATYLRQIVLAGLGDHLARRVQAEELLDDKWKNAYKTALLDDPVFIHPSSVLFKQL 965
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP---HYYKPRELEDSTNKKMPKTLGKSR 1147
P +V+Y E+V TTK +M+ V+ +E +W+ + P H+ KP LE+ P+T G+ R
Sbjct: 966 PEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPPYCHFGKP--LENPPPSYCPET-GRIR 1022
Score = 155 (59.6 bits), Expect = 3.6e-48, Sum P(4) = 3.6e-48
Identities = 42/120 (35%), Positives = 68/120 (56%)
Query: 1209 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1257
PTE +R+ + AG H+A+ ++ +YKTA + V IHP+S LF++L
Sbjct: 906 PTEAQATYLRQIVLAGLGDHLARRVQAEELLDDKWKNAYKTALLDDPVFIHPSSVLFKQL 965
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAP---HYYKPRELEDSTNKKMPKTLGKSR 1314
P +V+Y E+V TTK +M+ V+ +E +W+ + P H+ KP LE+ P+T G+ R
Sbjct: 966 PEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPPYCHFGKP--LENPPPSYCPET-GRIR 1022
Score = 66 (28.3 bits), Expect = 5.7e-39, Sum P(4) = 5.7e-39
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 1144 GKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1203
G+ + GD +V+L + + ++C EN +++++M R +R QL V V
Sbjct: 834 GQGSLQKLGDLMVMLGAVGACEYSGCTPKFCEENGLRYKAMLEIRRLRGQLTTAVNSVCT 893
Query: 1204 EL-------VSNPTET--VNIRKAITAGYFYHIAKLSKSGSYKTAKHN---QTVMIHPNS 1251
+ + PTE +R+ + AG H+A+ ++ K +T ++ +
Sbjct: 894 DAGLYVDPKMKPPTEAQATYLRQIVLAGLGDHLARRVQAEELLDDKWKNAYKTALL--DD 951
Query: 1252 SLFEELPRWVLYHELV-FTTKEFMRQVTEIESKWLLEVAPHY 1292
+F P VL+ +L F + + + T++ K + V P +
Sbjct: 952 PVFIH-PSSVLFKQLPEFVVYQEIVETTKLYMKGVSAVEPEW 992
Score = 65 (27.9 bits), Expect = 7.3e-39, Sum P(4) = 7.3e-39
Identities = 34/154 (22%), Positives = 69/154 (44%)
Query: 985 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMEL------ 1038
GD +V+L + + ++C EN +++++M R +R QL V V +
Sbjct: 842 GDLMVMLGAVGACEYSGCTPKFCEENGLRYKAMLEIRRLRGQLTTAVNSVCTDAGLYVDP 901
Query: 1039 -VSNPTET--VNIRKAITAGYFYHIAKLSKSGSYKTAKHN---QTVMIHPNSSLFEELPR 1092
+ PTE +R+ + AG H+A+ ++ K +T ++ + +F P
Sbjct: 902 KMKPPTEAQATYLRQIVLAGLGDHLARRVQAEELLDDKWKNAYKTALL--DDPVFIH-PS 958
Query: 1093 WVLYHELV-FTTKEFMRQVTEIESKWLLEVAPHY 1125
VL+ +L F + + + T++ K + V P +
Sbjct: 959 SVLFKQLPEFVVYQEIVETTKLYMKGVSAVEPEW 992
Score = 46 (21.3 bits), Expect = 3.6e-48, Sum P(4) = 3.6e-48
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 633 IDFIQALSLPGNRDKGEE--EMTEKQKKKLNIEETKKSL 669
ID AL LP ++K ++ +QKK L+ ++ KK+L
Sbjct: 44 IDGSNALVLPAKKEKKKKAPNAVRQQKKPLS-KKQKKNL 81
Score = 43 (20.2 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 447 DSDDDRKERDEFSERLK 463
D DDDRKE E + K
Sbjct: 493 DDDDDRKESVEEMRKFK 509
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 273 (101.2 bits), Expect = 4.4e-48, Sum P(4) = 4.4e-48
Identities = 59/137 (43%), Positives = 84/137 (61%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++E + LPI +Q +++AV +H ++II GETGSGKTTQ+PQ+L+EAG++ D IG T
Sbjct: 243 MQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVT 302
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+P +EM + V Y IR+E +E T IK+MTDG L +E + L
Sbjct: 303 EPRRVAAVAMSQRVAKEMNLSPRV-VSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 361
Query: 782 ASYSVMIIDEAHPK-VY 797
Y V+IIDEAH + VY
Sbjct: 362 LKYKVVIIDEAHERSVY 378
Score = 263 (97.6 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 62/142 (43%), Positives = 82/142 (57%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L Y V+IIDEAHER+++TDIL GL+ IV R LKLLI
Sbjct: 346 MTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIM 405
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F++ F PV ++ R+FPV +++ K P DY C + +IH
Sbjct: 406 SATLRVEDFTQNQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRML 465
Query: 112 PLGDILVFLTGQEEIET-CNEI 132
P G ILVFLTGQ E+ C +
Sbjct: 466 PAGGILVFLTGQAEVHALCRRL 487
Score = 224 (83.9 bits), Expect = 4.4e-48, Sum P(4) = 4.4e-48
Identities = 60/177 (33%), Positives = 91/177 (51%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ +++ TG+ S V +S+ASA+Q C+RLY++ + +
Sbjct: 632 YVVDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DF 690
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E PEI R + + +L +KAL I +I+F F PP E L+ A E L ALGAL
Sbjct: 691 EKYPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPK 750
Query: 917 ---------------LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
+T+LGR MA FP+ P KML S ++ C+ +TI + ++V
Sbjct: 751 TERVKQLQRSRLSCPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTV 807
Score = 190 (71.9 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS L + Q ++F P P R V+ATN+AETSLTI I YV+D G K+ +++
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 207 SRTGMESLTVVPISKASANQRAG 229
TG+ S V +S+ASA+QRAG
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAG 668
Score = 152 (58.6 bits), Expect = 4.4e-48, Sum P(4) = 4.4e-48
Identities = 35/103 (33%), Positives = 60/103 (58%)
Query: 1041 NPTETVNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEELP 1091
N + +R+ +TAG H+A+ +S +YKT + V IHP+S LF+ELP
Sbjct: 916 NEDQVTYLRQIVTAGLGDHLARKVQSEDLVDDKWKNAYKTPLLDDPVFIHPSSVLFKELP 975
Query: 1092 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELED 1133
+V+Y E+V TTK +M+ V+ ++ +W+ + P Y + + LE+
Sbjct: 976 EFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSYCQFDKPLEE 1018
Score = 152 (58.6 bits), Expect = 4.4e-48, Sum P(4) = 4.4e-48
Identities = 35/103 (33%), Positives = 60/103 (58%)
Query: 1208 NPTETVNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEELP 1258
N + +R+ +TAG H+A+ +S +YKT + V IHP+S LF+ELP
Sbjct: 916 NEDQVTYLRQIVTAGLGDHLARKVQSEDLVDDKWKNAYKTPLLDDPVFIHPSSVLFKELP 975
Query: 1259 RWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELED 1300
+V+Y E+V TTK +M+ V+ ++ +W+ + P Y + + LE+
Sbjct: 976 EFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSYCQFDKPLEE 1018
Score = 70 (29.7 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 985 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLI----------GLVQRV 1034
GD +VLL A S Q+C N +++++M R +R QL GL
Sbjct: 851 GDLMVLLGAVGACEYAGCSPQFCEANGLRYKAMMEIRRLRGQLTTAANTMCPEAGLFVDP 910
Query: 1035 EMELVSNPTETVNIRKAITAGYFYHIAKLSKS 1066
+M+ N + +R+ +TAG H+A+ +S
Sbjct: 911 KMQ-PPNEDQVTYLRQIVTAGLGDHLARKVQS 941
Score = 70 (29.7 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLI----------GLVQRV 1201
GD +VLL A S Q+C N +++++M R +R QL GL
Sbjct: 851 GDLMVLLGAVGACEYAGCSPQFCEANGLRYKAMMEIRRLRGQLTTAANTMCPEAGLFVDP 910
Query: 1202 EMELVSNPTETVNIRKAITAGYFYHIAKLSKS 1233
+M+ N + +R+ +TAG H+A+ +S
Sbjct: 911 KMQ-PPNEDQVTYLRQIVTAGLGDHLARKVQS 941
Score = 51 (23.0 bits), Expect = 4.4e-48, Sum P(4) = 4.4e-48
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 633 IDFIQALSLPGNRDKGEEE--MTEKQKKKLNIEETK 666
+D AL LPG + K + +++K+KK L +E K
Sbjct: 43 VDASNALVLPGKKKKKTKAPPLSKKEKKPLTKKERK 78
Score = 44 (20.5 bits), Expect = 6.8e-32, Sum P(3) = 6.8e-32
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 889 FLDP---PPHETLVLALEQLYALGALNH 913
F+DP PP+E V L Q+ G +H
Sbjct: 907 FVDPKMQPPNEDQVTYLRQIVTAGLGDH 934
Score = 38 (18.4 bits), Expect = 6.5e-29, Sum P(4) = 6.5e-29
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 926 EFPLDPMMGKML-LASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+FP+ K L +C ++ I ML G + + +HA
Sbjct: 434 QFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHA 482
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 275 (101.9 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 60/137 (43%), Positives = 83/137 (60%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
I+E + LP+ +Q +++AV+DH+ +++ GETGSGKTTQ+PQ+L+EAGF IG T
Sbjct: 245 IQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVT 304
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+P EM + G V Y IR+E +E T IK MTDG L +E + L
Sbjct: 305 EPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFLL 363
Query: 782 ASYSVMIIDEAHPK-VY 797
YSV+IIDEAH + VY
Sbjct: 364 QKYSVIIIDEAHERSVY 380
Score = 250 (93.1 bits), Expect = 3.6e-42, Sum P(4) = 3.6e-42
Identities = 61/142 (42%), Positives = 83/142 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L YSV+IIDEAHER+++TDIL GL+ IV R+ +KL+I
Sbjct: 348 MTDGVLLKEIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIM 407
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F+E F PV ++ R+F V +++ K P DY I +IH
Sbjct: 408 SATLRVEDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRML 467
Query: 112 PLGDILVFLTGQEEIET-CNEI 132
P G ILVFLTGQ E+ + C +
Sbjct: 468 PPGGILVFLTGQAEVHSVCRRL 489
Score = 218 (81.8 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 61/177 (34%), Positives = 90/177 (50%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ ++ TG+ S V IS+ASANQ C+RLY++ + +
Sbjct: 626 YVVDCGRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFG-DF 684
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN---H 913
+ EI R + + VL +K L I +++F F PP E L+ A E L +LGAL
Sbjct: 685 SLFSEAEITRRPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPAR 744
Query: 914 HGDLTK------------LGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
HG L++ LGR MA FP+ P KML + C++ I+TI S ++V
Sbjct: 745 HGRLSEMEKARLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTV 801
Score = 200 (75.5 bits), Expect = 3.4e-41, Sum P(3) = 3.4e-41
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS L + Q K+F P P +R V+ATN+AETSLTI I YV+D G K+ ++
Sbjct: 580 LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYD 639
Query: 207 SRTGMESLTVVPISKASANQRAG 229
TG+ S V IS+ASANQRAG
Sbjct: 640 RVTGVSSFKVTWISQASANQRAG 662
Score = 137 (53.3 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 35/115 (30%), Positives = 61/115 (53%)
Query: 1042 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1090
PTE + +R+ + AG HIA+ ++ +YKT + V IHP+S+L + L
Sbjct: 909 PTEAQVLCLRQIVLAGLGDHIARRVQAEELLDPKWRNAYKTPLLDDPVFIHPSSALHKTL 968
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1145
P +V+Y E++ TTK +MR V ++ W+ ++ P Y E+S + +G+
Sbjct: 969 PEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQYCHFSAPEESPAPRFCPLIGR 1023
Score = 137 (53.3 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 35/115 (30%), Positives = 61/115 (53%)
Query: 1209 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1257
PTE + +R+ + AG HIA+ ++ +YKT + V IHP+S+L + L
Sbjct: 909 PTEAQVLCLRQIVLAGLGDHIARRVQAEELLDPKWRNAYKTPLLDDPVFIHPSSALHKTL 968
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGK 1312
P +V+Y E++ TTK +MR V ++ W+ ++ P Y E+S + +G+
Sbjct: 969 PEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQYCHFSAPEESPAPRFCPLIGR 1023
Score = 83 (34.3 bits), Expect = 4.2e-42, Sum P(4) = 4.2e-42
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 1144 GKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV-- 1201
G+ + L GD +VLL A + Q+C EN ++ ++M R +R QL V V
Sbjct: 837 GQGASLLLGDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLEIRRLRGQLTNAVNAVCA 896
Query: 1202 EMEL-VSN----PTET--VNIRKAITAGYFYHIAK 1229
+ ++ V N PTE + +R+ + AG HIA+
Sbjct: 897 DADVYVDNKMAPPTEAQVLCLRQIVLAGLGDHIAR 931
Score = 81 (33.6 bits), Expect = 6.8e-42, Sum P(4) = 6.8e-42
Identities = 29/90 (32%), Positives = 46/90 (51%)
Query: 982 MLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV--EMEL- 1038
+L GD +VLL A + Q+C EN ++ ++M R +R QL V V + ++
Sbjct: 842 LLLGDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLEIRRLRGQLTNAVNAVCADADVY 901
Query: 1039 VSN----PTET--VNIRKAITAGYFYHIAK 1062
V N PTE + +R+ + AG HIA+
Sbjct: 902 VDNKMAPPTEAQVLCLRQIVLAGLGDHIAR 931
Score = 66 (28.3 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYEL---LLDNQIDFIQALSLPGNRDKGEEEMTE 654
++ W+ Q S+++ + A DR+ Q E+ + +D AL LP + K ++
Sbjct: 6 KKHNWKGRQQSTSV-QTAAADRQTNVQVEIQDGAVLKGVDDCNALVLPATKTKKQKVERP 64
Query: 655 KQKKKLNIEETKKSL 669
KKK ++ +K+L
Sbjct: 65 VTKKKALTKKQRKNL 79
Score = 54 (24.1 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 863 EIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGDLTKLGR 922
EI+R+ G + A+ + ++ D PP E VL L Q+ L L H + R
Sbjct: 879 EIRRLR-GQLTNAVNAVCADADVYVDNKMAPPTEAQVLCLRQI-VLAGLGDH-----IAR 931
Query: 923 RM-AEFPLDP 931
R+ AE LDP
Sbjct: 932 RVQAEELLDP 941
Score = 47 (21.6 bits), Expect = 1.0e-45, Sum P(4) = 1.0e-45
Identities = 13/51 (25%), Positives = 30/51 (58%)
Query: 617 KDREHQEQYELLLDNQIDFIQALSLPGNRDK-GEEEMTEKQKKKLNIEETK 666
++ E++ + ++ D ++ S ++K EE+ TE+Q++++ EETK
Sbjct: 161 EEEENESEMSESSEDDDDSEESDSSEEEKEKISEEKHTEEQQQQVLKEETK 211
Score = 39 (18.8 bits), Expect = 3.6e-42, Sum P(4) = 3.6e-42
Identities = 6/30 (20%), Positives = 18/30 (60%)
Query: 201 KQNNFNSRTGMESLTVVPISKASANQRAGV 230
K+N R +++ + +P+ + +++AG+
Sbjct: 519 KKNVSLPRINLDNYSALPVDEGDEDRQAGI 548
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 269 (99.8 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 58/137 (42%), Positives = 84/137 (61%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++E + LPI +Q +++AV +H ++I+ GETGSGKTTQ+PQ+L+EAGF+ + IG T
Sbjct: 32 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 91
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+P +EM + V Y IR+E +E T IK+MTDG L +E + L
Sbjct: 92 EPRRVAAVAMSQRVAKEMNLSQRV-VSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 150
Query: 782 ASYSVMIIDEAHPK-VY 797
Y V+IIDEAH + VY
Sbjct: 151 LRYKVVIIDEAHERSVY 167
Score = 264 (98.0 bits), Expect = 4.0e-46, Sum P(4) = 4.0e-46
Identities = 62/142 (43%), Positives = 83/142 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L Y V+IIDEAHER+++TDIL GL+ IV R+ LKLLI
Sbjct: 135 MTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIM 194
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F++ F PV ++ R+FPV +++ K P DY C + +IH
Sbjct: 195 SATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRML 254
Query: 112 PLGDILVFLTGQEEIET-CNEI 132
P G ILVFLTGQ E+ C +
Sbjct: 255 PAGGILVFLTGQAEVHALCRRL 276
Score = 218 (81.8 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 60/177 (33%), Positives = 90/177 (50%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ ++ TG+ S V +S+ASA+Q C+RLY++ + +
Sbjct: 421 YVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DF 479
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL----- 911
E PEI R + + +L +KAL + +I+F F PP E L+ A E L ALGAL
Sbjct: 480 EQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQK 539
Query: 912 ---------NHHG-DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
N +T LGR MA FP+ P KML S ++ C+ +TI + ++V
Sbjct: 540 AERVKQLQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTV 596
Score = 187 (70.9 bits), Expect = 6.5e-43, Sum P(4) = 6.5e-43
Identities = 40/83 (48%), Positives = 55/83 (66%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS L + Q ++F P P R V+ATN+AETSLTI I YV+D G K+ ++
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 207 SRTGMESLTVVPISKASANQRAG 229
TG+ S V +S+ASA+QRAG
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAG 457
Score = 158 (60.7 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 39/112 (34%), Positives = 64/112 (57%)
Query: 1042 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1090
PTE+ +R+ +TAG H+A+ +S +YKT + V IHP+S LF+EL
Sbjct: 704 PTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKEL 763
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELEDSTNKKMPK 1141
P +V+Y E+V TTK +M+ V+ +E +W+ + P Y + + LE+ P+
Sbjct: 764 PEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEPAPTYCPE 815
Score = 158 (60.7 bits), Expect = 1.1e-46, Sum P(4) = 1.1e-46
Identities = 39/112 (34%), Positives = 64/112 (57%)
Query: 1209 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1257
PTE+ +R+ +TAG H+A+ +S +YKT + V IHP+S LF+EL
Sbjct: 704 PTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKEL 763
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELEDSTNKKMPK 1308
P +V+Y E+V TTK +M+ V+ +E +W+ + P Y + + LE+ P+
Sbjct: 764 PEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEPAPTYCPE 815
Score = 88 (36.0 bits), Expect = 1.9e-39, Sum P(4) = 1.9e-39
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 1138 KMPKTLGKSRAELG-GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIG 1196
+M +T A L GD +VLL A + Q+C N +++++M R +R QL
Sbjct: 625 QMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTT 684
Query: 1197 LVQRV--EMEL-----VSNPTET--VNIRKAITAGYFYHIAKLSKS 1233
V V E EL + PTE+ +R+ +TAG H+A+ +S
Sbjct: 685 AVNAVCPEAELFVDPKMQPPTESQVTYLRQIVTAGLGDHLARRVQS 730
Score = 85 (35.0 bits), Expect = 4.5e-40, Sum P(3) = 4.5e-40
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 985 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV--EMEL---- 1038
GD +VLL A + Q+C N +++++M R +R QL V V E EL
Sbjct: 640 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDP 699
Query: 1039 -VSNPTET--VNIRKAITAGYFYHIAKLSKS 1066
+ PTE+ +R+ +TAG H+A+ +S
Sbjct: 700 KMQPPTESQVTYLRQIVTAGLGDHLARRVQS 730
Score = 43 (20.2 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 889 FLDP---PPHETLVLALEQLYALGALNH 913
F+DP PP E+ V L Q+ G +H
Sbjct: 696 FVDPKMQPPTESQVTYLRQIVTAGLGDH 723
Score = 38 (18.4 bits), Expect = 3.9e-28, Sum P(4) = 3.9e-28
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 926 EFPLDPMMGKML-LASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+FP+ K L +C ++ I ML G + + +HA
Sbjct: 223 QFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHA 271
Score = 37 (18.1 bits), Expect = 1.1e-46, Sum P(4) = 1.1e-46
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKW 1117
LFEEL R E + K +V +++ W
Sbjct: 599 LFEELDRPAASDEELTRLKSKRARVAQMKRTW 630
Score = 37 (18.1 bits), Expect = 4.4e-35, Sum P(3) = 4.4e-35
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1253 LFEELPRWVLYHELVFTTKEFMRQVTEIESKW 1284
LFEEL R E + K +V +++ W
Sbjct: 599 LFEELDRPAASDEELTRLKSKRARVAQMKRTW 630
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 269 (99.8 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 58/137 (42%), Positives = 84/137 (61%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++E + LPI +Q +++AV +H ++I+ GETGSGKTTQ+PQ+L+EAGF+ + IG T
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 304
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+P +EM + V Y IR+E +E T IK+MTDG L +E + L
Sbjct: 305 EPRRVAAVAMSQRVAKEMNLSQRV-VSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 363
Query: 782 ASYSVMIIDEAHPK-VY 797
Y V+IIDEAH + VY
Sbjct: 364 LRYKVVIIDEAHERSVY 380
Score = 264 (98.0 bits), Expect = 1.2e-45, Sum P(4) = 1.2e-45
Identities = 62/142 (43%), Positives = 83/142 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L Y V+IIDEAHER+++TDIL GL+ IV R+ LKLLI
Sbjct: 348 MTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIM 407
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F++ F PV ++ R+FPV +++ K P DY C + +IH
Sbjct: 408 SATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRML 467
Query: 112 PLGDILVFLTGQEEIET-CNEI 132
P G ILVFLTGQ E+ C +
Sbjct: 468 PAGGILVFLTGQAEVHALCRRL 489
Score = 218 (81.8 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 60/177 (33%), Positives = 90/177 (50%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ ++ TG+ S V +S+ASA+Q C+RLY++ + +
Sbjct: 634 YVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DF 692
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL----- 911
E PEI R + + +L +KAL + +I+F F PP E L+ A E L ALGAL
Sbjct: 693 EQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQK 752
Query: 912 ---------NHHG-DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
N +T LGR MA FP+ P KML S ++ C+ +TI + ++V
Sbjct: 753 AERVKQLQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTV 809
Score = 187 (70.9 bits), Expect = 1.9e-42, Sum P(4) = 1.9e-42
Identities = 40/83 (48%), Positives = 55/83 (66%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS L + Q ++F P P R V+ATN+AETSLTI I YV+D G K+ ++
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 207 SRTGMESLTVVPISKASANQRAG 229
TG+ S V +S+ASA+QRAG
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAG 670
Score = 158 (60.7 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 39/112 (34%), Positives = 64/112 (57%)
Query: 1042 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1090
PTE+ +R+ +TAG H+A+ +S +YKT + V IHP+S LF+EL
Sbjct: 917 PTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKEL 976
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELEDSTNKKMPK 1141
P +V+Y E+V TTK +M+ V+ +E +W+ + P Y + + LE+ P+
Sbjct: 977 PEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEPAPTYCPE 1028
Score = 158 (60.7 bits), Expect = 8.4e-47, Sum P(5) = 8.4e-47
Identities = 39/112 (34%), Positives = 64/112 (57%)
Query: 1209 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1257
PTE+ +R+ +TAG H+A+ +S +YKT + V IHP+S LF+EL
Sbjct: 917 PTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKEL 976
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELEDSTNKKMPK 1308
P +V+Y E+V TTK +M+ V+ +E +W+ + P Y + + LE+ P+
Sbjct: 977 PEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEPAPTYCPE 1028
Score = 88 (36.0 bits), Expect = 1.2e-39, Sum P(5) = 1.2e-39
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 1138 KMPKTLGKSRAELG-GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIG 1196
+M +T A L GD +VLL A + Q+C N +++++M R +R QL
Sbjct: 838 QMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTT 897
Query: 1197 LVQRV--EMEL-----VSNPTET--VNIRKAITAGYFYHIAKLSKS 1233
V V E EL + PTE+ +R+ +TAG H+A+ +S
Sbjct: 898 AVNAVCPEAELFVDPKMQPPTESQVTYLRQIVTAGLGDHLARRVQS 943
Score = 85 (35.0 bits), Expect = 4.3e-40, Sum P(4) = 4.3e-40
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 985 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV--EMEL---- 1038
GD +VLL A + Q+C N +++++M R +R QL V V E EL
Sbjct: 853 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDP 912
Query: 1039 -VSNPTET--VNIRKAITAGYFYHIAKLSKS 1066
+ PTE+ +R+ +TAG H+A+ +S
Sbjct: 913 KMQPPTESQVTYLRQIVTAGLGDHLARRVQS 943
Score = 51 (23.0 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 633 IDFIQALSLPGNRDKGEEE--MTEKQKKKLNIEETK 666
+D AL LPG + K + +++K+KK L +E K
Sbjct: 43 VDASNALVLPGKKKKKTKAPPLSKKEKKPLTKKEKK 78
Score = 43 (20.2 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 889 FLDP---PPHETLVLALEQLYALGALNH 913
F+DP PP E+ V L Q+ G +H
Sbjct: 909 FVDPKMQPPTESQVTYLRQIVTAGLGDH 936
Score = 38 (18.4 bits), Expect = 1.9e-28, Sum P(5) = 1.9e-28
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 926 EFPLDPMMGKML-LASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+FP+ K L +C ++ I ML G + + +HA
Sbjct: 436 QFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHA 484
Score = 37 (18.1 bits), Expect = 8.4e-47, Sum P(5) = 8.4e-47
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1086 LFEELPRWVLYHELVFTTKEFMRQVTEIESKW 1117
LFEEL R E + K +V +++ W
Sbjct: 812 LFEELDRPAASDEELTRLKSKRARVAQMKRTW 843
Score = 37 (18.1 bits), Expect = 3.8e-35, Sum P(4) = 3.8e-35
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1253 LFEELPRWVLYHELVFTTKEFMRQVTEIESKW 1284
LFEEL R E + K +V +++ W
Sbjct: 812 LFEELDRPAASDEELTRLKSKRARVAQMKRTW 843
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 367 (134.2 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 108/371 (29%), Positives = 175/371 (47%)
Query: 794 PKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAY 852
P + +VID G ++ +N + ES + PIS+ A C LY
Sbjct: 336 PSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEARRLRARGIPPGSCICLYPESFL 395
Query: 853 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN 912
+ E P + NL VL+LK I + FLD P E L+ ALE L L AL+
Sbjct: 396 ELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQALEDLDYLAALD 455
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
G+L+ LG ++EFPL P + K LLAS ++ CV+E++T+A+ML+ + P +
Sbjct: 456 DDGNLSDLGVILSEFPLPPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTHPP----LS 511
Query: 973 ADTA--RKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGL 1030
A+ A R+ GDH L+ +Y + + WC + ++ +A+ +R +L+ L
Sbjct: 512 AEEAALRRALEHADGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLEL 571
Query: 1031 VQRVEMELVSNPT-----ETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNS 1084
+Q++E+ L S P +++KA+ +GYF +A+ +G+Y H + P
Sbjct: 572 MQQIELPL-SQPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYC 630
Query: 1085 SLFEEL-----PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDST 1135
P WVLYH + + V+EI+ + L+E+AP Y+ P E D
Sbjct: 631 CYRSRRSPARSPPWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLL 690
Query: 1136 NKKMPKTLGKS 1146
N+ +T S
Sbjct: 691 NELREETTDSS 701
Score = 213 (80.0 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 64/238 (26%), Positives = 117/238 (49%)
Query: 3 DGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKD--IVRFRSDLKLLISSATL 60
D L +E S ++ V+++DEA ER++ +D+L GL+++ + D ++++ +
Sbjct: 148 DRLLLQEVASTRGTGAWGVLVLDEAQERSVASDLLQGLLRNAKLGNLPGDSRVVVVTDPA 207
Query: 61 DAQKFSEFFDDAPVFRIP-GR-RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILV 118
K F+ + + +P G P +Y P D ++A ++L++ A + GD+LV
Sbjct: 208 LEPKLQAFWGNPTIVHVPRGPGACPTPVYRDIVP-TDRVEAACQAVLELCAKEAPGDVLV 266
Query: 119 FLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
+L +EEI C E L V L + +LP++ +Q + ARKVV+
Sbjct: 267 YLPSEEEILQCCESLSREVEPLALRGPPPRVLPLHPGHGPAVQAA-YEDIDLGARKVVVT 325
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNP 236
+A+ S ++ +I +VID G ++ +N + ES + PIS+ A R G P
Sbjct: 326 HWLADFSFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEARRLRARGIPP 383
Score = 192 (72.6 bits), Expect = 5.9e-45, Sum P(2) = 5.9e-45
Identities = 49/166 (29%), Positives = 83/166 (50%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQ--VLIIEGETGSGKTTQIPQYLHE----AGFTKDKMK 717
E +++LPI+ + ++ + V+++ GE GSGK+TQIPQ+ E GF + ++
Sbjct: 40 EQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKSTQIPQWCAEFALARGFKEGRVT 99
Query: 718 IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS 777
+ TQP +EM + LG EVGY+I EDCT T++++ D L +E S
Sbjct: 100 V--TQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVAS 157
Query: 778 EPDLASYSVMIIDEAHPKVYVID--PGFCKQNNFNSRTGMESLTVV 821
++ V+++DEA + D G + + G + VV
Sbjct: 158 TRGTGAWGVLVLDEAQERSVASDLLQGLLRNAKLGNLPGDSRVVVV 203
Score = 174 (66.3 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT- 1210
GDH L+ +Y + + WC + ++ +A+ +R +L+ L+Q++E+ L S P
Sbjct: 526 GDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLELMQQIELPL-SQPAF 584
Query: 1211 ----ETVNIRKAITAGYFYHIAK-LSKSGSYKTAKHNQTVMIHPNSSLFEEL-----PRW 1260
+++KA+ +GYF +A+ +G+Y H + P P W
Sbjct: 585 GSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCCYRSRRSPARSPPW 644
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWLLEVAPHYY----KPRELEDSTNKKMPKTLGKS 1313
VLYH + + V+EI+ + L+E+AP Y+ P E D N+ +T S
Sbjct: 645 VLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNELREETTDSS 701
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 269 (99.8 bits), Expect = 7.8e-47, Sum P(4) = 7.8e-47
Identities = 57/137 (41%), Positives = 84/137 (61%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++E + LPI +Q +++AV +H ++I+ GETGSGKTTQ+PQ+L+EAG++ D IG T
Sbjct: 239 MQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGIT 298
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+P +EM + V Y IR+E +E T IK+MTDG L +E + L
Sbjct: 299 EPRRVAAVAMSQRVAKEMNLSQRV-VSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 357
Query: 782 ASYSVMIIDEAHPK-VY 797
Y V++IDEAH + VY
Sbjct: 358 LRYKVVLIDEAHERSVY 374
Score = 261 (96.9 bits), Expect = 6.1e-46, Sum P(3) = 6.1e-46
Identities = 61/142 (42%), Positives = 83/142 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L Y V++IDEAHER+++TDIL GL+ IV R+ LKLLI
Sbjct: 342 MTDGVLLKEIQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIM 401
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F++ F PV ++ R+FPV +++ K P DY C + +IH
Sbjct: 402 SATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRML 461
Query: 112 PLGDILVFLTGQEEIET-CNEI 132
P G ILVFLTGQ E+ C +
Sbjct: 462 PAGGILVFLTGQAEVHALCRRL 483
Score = 225 (84.3 bits), Expect = 7.8e-47, Sum P(4) = 7.8e-47
Identities = 61/177 (34%), Positives = 91/177 (51%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ +++ TG+ S V +S+ASA+Q C+RLY++ + +
Sbjct: 628 YVVDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFS-DF 686
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHH-- 914
E PEI R + + +L +KAL I +I+F F PP E L+ A E L ALGAL
Sbjct: 687 EQFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQK 746
Query: 915 ------------G-DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
G +T LGR MA FP+ P KML S ++ C+ +TI + ++V
Sbjct: 747 TESVKQLQRSWLGCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTV 803
Score = 190 (71.9 bits), Expect = 2.7e-42, Sum P(3) = 2.7e-42
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS L + Q ++F P P R V+ATN+AETSLTI I YV+D G K+ +++
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 207 SRTGMESLTVVPISKASANQRAG 229
TG+ S V +S+ASA+QRAG
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAG 664
Score = 146 (56.5 bits), Expect = 7.8e-47, Sum P(4) = 7.8e-47
Identities = 37/115 (32%), Positives = 65/115 (56%)
Query: 1029 GLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVM 1079
GL +M+ S ++ +R+ + AG H+A+ +S +YKT + V
Sbjct: 901 GLFMDPKMQPPSE-SQVTYLRQIVAAGLGDHLARRVQSEDLLDDKWKNAYKTPLLDDPVF 959
Query: 1080 IHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELED 1133
IHP+S LF+ELP +V+Y E++ TTK +M+ V+ +E +W+ + P Y + + LE+
Sbjct: 960 IHPSSVLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSYCQFDKPLEE 1014
Score = 146 (56.5 bits), Expect = 7.8e-47, Sum P(4) = 7.8e-47
Identities = 37/115 (32%), Positives = 65/115 (56%)
Query: 1196 GLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVM 1246
GL +M+ S ++ +R+ + AG H+A+ +S +YKT + V
Sbjct: 901 GLFMDPKMQPPSE-SQVTYLRQIVAAGLGDHLARRVQSEDLLDDKWKNAYKTPLLDDPVF 959
Query: 1247 IHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK-PRELED 1300
IHP+S LF+ELP +V+Y E++ TTK +M+ V+ +E +W+ + P Y + + LE+
Sbjct: 960 IHPSSVLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSYCQFDKPLEE 1014
Score = 70 (29.7 bits), Expect = 5.6e-39, Sum P(4) = 5.6e-39
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 985 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV--EMELVSNP 1042
GD +VLL + S Q+C N +++++M R +R QL V V E L +P
Sbjct: 847 GDIMVLLGAVGACEYSGRSPQFCEANGLRYKAMMEIRRLRGQLTTAVNTVCPEAGLFMDP 906
Query: 1043 -------TETVNIRKAITAGYFYHIAKLSKS 1066
++ +R+ + AG H+A+ +S
Sbjct: 907 KMQPPSESQVTYLRQIVAAGLGDHLARRVQS 937
Score = 70 (29.7 bits), Expect = 5.6e-39, Sum P(4) = 5.6e-39
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 1152 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV--EMELVSNP 1209
GD +VLL + S Q+C N +++++M R +R QL V V E L +P
Sbjct: 847 GDIMVLLGAVGACEYSGRSPQFCEANGLRYKAMMEIRRLRGQLTTAVNTVCPEAGLFMDP 906
Query: 1210 -------TETVNIRKAITAGYFYHIAKLSKS 1233
++ +R+ + AG H+A+ +S
Sbjct: 907 KMQPPSESQVTYLRQIVAAGLGDHLARRVQS 937
Score = 49 (22.3 bits), Expect = 3.3e-32, Sum P(3) = 3.3e-32
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 889 FLDP---PPHETLVLALEQLYALGALNH 913
F+DP PP E+ V L Q+ A G +H
Sbjct: 903 FMDPKMQPPSESQVTYLRQIVAAGLGDH 930
Score = 48 (22.0 bits), Expect = 7.8e-47, Sum P(4) = 7.8e-47
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 633 IDFIQALSLPGNRDKGEEEM--TEKQKKKLNIEETK 666
ID AL LPG + K + ++K+KK L +E K
Sbjct: 43 IDASNALVLPGKKKKKPKAPPPSKKEKKPLTKKERK 78
Score = 38 (18.4 bits), Expect = 1.4e-27, Sum P(4) = 1.4e-27
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 926 EFPLDPMMGKML-LASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+FP+ K L +C ++ I ML G + + +HA
Sbjct: 430 QFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHA 478
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 274 (101.5 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 93/355 (26%), Positives = 163/355 (45%)
Query: 450 DDRKERDEFSERLKNRDKNNT-KNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIES 508
D +KE+D+ SE + N+T KNV + + + P+ +
Sbjct: 189 DQQKEQDD-SEDENTIELNSTNKNVEIKKHNNKHTKDNNKEEQQPPPPPPPPQPETE-QK 246
Query: 509 RRKYLEKRKEDKVAELEADILDDEYLFSEQELTXXXXXXXXXXXXXXXXAKEHDKARELE 568
+RK +E+ + D + + + D+ + T K ++ ++ +
Sbjct: 247 KRKTIEQSEND--TKKKKKVNDNNKTQTTTTTTTTTTTTTTQSNINTIKTKTNENKKQNK 304
Query: 569 KVQRYYMPKGTKGPXXXXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGAKDREHQEQYELL 628
K Q+ + + K Q E ++ + +I G ++ E++E + L
Sbjct: 305 K-QKNKVEEKVKEEEEEEEIKKEELEEIANQVNSEIDRYNYSIEVFGKEEEENREVF-LS 362
Query: 629 LDNQIDFIQ-ALSLPGNRDKGEEEMTE-KQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
I+ I+ A+S + E + K ++K I+ + +LPI + +++ ++D+
Sbjct: 363 TKTGIETIEDAMSEEVDAKPIEYNVFNVKVERKPEIDAVRDNLPIMLEEHSIVEKIKDND 422
Query: 687 VLIIEGETGSGKTTQIPQYLHEAGFTKDKMK-----IGCTQPXXXXXXXXXXXXXEEMGV 741
V+II GETGSGKTTQ+PQ+L+E+GF + IG TQP EE+ V
Sbjct: 423 VVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGVTQPRRVAAVSTAKRVAEELNV 482
Query: 742 KLGCEVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
+ G EVGY IR++ S IK+MTDG L RE ++ L+ YS ++IDEAH +
Sbjct: 483 EFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDFLLSQYSSILIDEAHER 537
Score = 262 (97.3 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 58/167 (34%), Positives = 90/167 (53%)
Query: 794 PKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAY 852
P + YV+D G KQ +N G+ S V SKASA+Q C+R+Y++ +
Sbjct: 888 PNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVF 947
Query: 853 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN 912
+ + PEI I + +L +K++GI + F F PP +L LAL L LGAL
Sbjct: 948 NDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALE 1007
Query: 913 HHG-DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
+T+LG +M++FP+ P KMLL +++ C+ I+ I S+L+V
Sbjct: 1008 VKTFSITELGMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTV 1054
Score = 211 (79.3 bits), Expect = 2.3e-38, Sum P(6) = 2.3e-38
Identities = 45/83 (54%), Positives = 56/83 (67%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS LPT Q ++F P +R VV+ATN+AETSLTI NI YV+D G KQ +N
Sbjct: 846 LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN 905
Query: 207 SRTGMESLTVVPISKASANQRAG 229
G+ S V SKASA+QRAG
Sbjct: 906 KDNGISSFEVGWTSKASADQRAG 928
Score = 172 (65.6 bits), Expect = 2.2e-43, Sum P(6) = 2.2e-43
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 51 LKLLISSATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTKAPE-ADYIDACVVSIL 105
LKL++ SATL + F++ F PV IP R+FPV I++ K E +YID C ++
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 106 QIHATQPLGDILVFLTGQEEIE-TCNEI 132
+IH P G ILVF+TG++EIE C+++
Sbjct: 640 KIHKNLPSGGILVFVTGKQEIEYLCSKL 667
Score = 128 (50.1 bits), Expect = 2.2e-43, Sum P(6) = 2.2e-43
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKL 53
MTDG L RE ++ L+ YS ++IDEAHER L+TDIL GL+ IV R L L
Sbjct: 508 MTDGILMREVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 81 (33.6 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 1203 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL--FEELPRW 1260
++ +S ET +I + + S S + + T IHP S+L +
Sbjct: 1216 IDQISKVKETQSITGKNHPKHLIEYQTCTTSYSNSSGGGDGTCFIHPTSNLGGVNTQAEY 1275
Query: 1261 VLYHELVFTTKEFMRQVTEIESKWL 1285
V+Y +++ T++ +M+ VTEI WL
Sbjct: 1276 VIYCDIIETSRPYMKLVTEINPSWL 1300
Score = 81 (33.6 bits), Expect = 2.2e-41, Sum P(5) = 2.2e-41
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 1036 MELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL--FEELPRW 1093
++ +S ET +I + + S S + + T IHP S+L +
Sbjct: 1216 IDQISKVKETQSITGKNHPKHLIEYQTCTTSYSNSSGGGDGTCFIHPTSNLGGVNTQAEY 1275
Query: 1094 VLYHELVFTTKEFMRQVTEIESKWL 1118
V+Y +++ T++ +M+ VTEI WL
Sbjct: 1276 VIYCDIIETSRPYMKLVTEINPSWL 1300
Score = 63 (27.2 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 1006 WCYENFIQHRSMKRARDVREQLIGLVQRV-----EMELVSNPTET-VNIRKAI 1052
+C +NF+ +SM +R QL +V + E++ +SNP T VN ++I
Sbjct: 1144 FCSQNFLNTKSMSEIHKLRHQLTEIVNSINQTNHELDPISNPIITLVNPDQSI 1196
Score = 63 (27.2 bits), Expect = 1.5e-39, Sum P(5) = 1.5e-39
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 1173 WCYENFIQHRSMKRARDVREQLIGLVQRV-----EMELVSNPTET-VNIRKAI 1219
+C +NF+ +SM +R QL +V + E++ +SNP T VN ++I
Sbjct: 1144 FCSQNFLNTKSMSEIHKLRHQLTEIVNSINQTNHELDPISNPIITLVNPDQSI 1196
Score = 49 (22.3 bits), Expect = 2.3e-38, Sum P(6) = 2.3e-38
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 435 PKVRAFMGHFLTDSDDDRKERDEFSERLKNRDKNNTKN-VATSRQDKRXXXXXXXXXXXX 493
P + A + LT D KE E ++ D NN K + +S Q ++
Sbjct: 1043 PYIIAIVS-ILTVKDPFLKEAYEANQNNDENDDNNEKQQIDSSSQSEKEFIEKEKE---- 1097
Query: 494 XXSRDKIIPKLRIESRRKYLEKRKE 518
R K + +LR S RK+L K +
Sbjct: 1098 --ERQKHLQRLR-NSMRKWLHKESD 1119
Score = 44 (20.5 bits), Expect = 2.2e-43, Sum P(6) = 2.2e-43
Identities = 14/84 (16%), Positives = 37/84 (44%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIES 508
DDD + D+ ++ ++N D N + +++ ++ + + +E
Sbjct: 732 DDDDNDNDDDNDDIENLDVLNDDQFIVNDEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEE 791
Query: 509 RRKYLEKRKEDKVAELEADILDDE 532
E+ +E++V E E ++ ++E
Sbjct: 792 EEVEEEEVEEEEVEE-EEEVDENE 814
Score = 42 (19.8 bits), Expect = 4.2e-21, Sum P(5) = 4.2e-21
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 501 IPKLRIESRRKYLEKRKEDK 520
+ ++ + + K +EKR+E+K
Sbjct: 137 LDRIEFDKQHKAIEKRREEK 156
Score = 41 (19.5 bits), Expect = 2.6e-39, Sum P(6) = 2.6e-39
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 1206 VSNPTETVN--IRKAITAGYFYHIAKLSKSGSYKTAKH 1241
+ PT+ I++ ITAG I+K+ ++ S H
Sbjct: 1196 IKPPTQKQELFIKQVITAGLIDQISKVKETQSITGKNH 1233
Score = 41 (19.5 bits), Expect = 1.5e-37, Sum P(6) = 1.5e-37
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 507 ESRRKYLEKRKEDKVAELE 525
+S ++++EK KE++ L+
Sbjct: 1086 QSEKEFIEKEKEERQKHLQ 1104
Score = 41 (19.5 bits), Expect = 2.6e-37, Sum P(5) = 2.6e-37
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 1039 VSNPTETVN--IRKAITAGYFYHIAKLSKSGSYKTAKH 1074
+ PT+ I++ ITAG I+K+ ++ S H
Sbjct: 1196 IKPPTQKQELFIKQVITAGLIDQISKVKETQSITGKNH 1233
Score = 39 (18.8 bits), Expect = 7.2e-43, Sum P(6) = 7.2e-43
Identities = 13/75 (17%), Positives = 36/75 (48%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQK 657
E+ + E+E++ + E E+ E+ + ++D + + N D+ E E+ ++
Sbjct: 775 EEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEEEVDENENNNNNNNEDEDEFEIGKEDI 834
Query: 658 KKLNIEETKKSLPIY 672
+ ++ K + P++
Sbjct: 835 --ITEDDEKPAGPLF 847
Score = 39 (18.8 bits), Expect = 6.0e-08, Sum P(5) = 6.0e-08
Identities = 25/105 (23%), Positives = 45/105 (42%)
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPP 170
+P G + V L + T ++ + LGS+ L++ V +NL +T + T P
Sbjct: 841 KPAGPLFV-LPLYSTLPTSKQMRVFQTPPLGSR---LVV--VATNLA---ETSL---TIP 888
Query: 171 NARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLT 215
N + VV + + DN I + G+ + + + R G T
Sbjct: 889 NIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRT 933
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 275 (101.9 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 67/153 (43%), Positives = 91/153 (59%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFR-----SD----- 50
MTDG L RE S+ L +YS +I+DEAHER+++TDIL GL+ IVR R SD
Sbjct: 498 MTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKP 557
Query: 51 LKLLISSATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQ 106
LKL+I SATL FSE F P+ +I R++PV I++ + + DY+ +
Sbjct: 558 LKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCL 617
Query: 107 IHATQPLGDILVFLTGQEEIETCNEILQDRVRR 139
IH P G ILVFLTGQ+E+E ++L+ R R
Sbjct: 618 IHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVR 650
Score = 265 (98.3 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 65/209 (31%), Positives = 112/209 (53%)
Query: 772 HREFLSEPDLASYSVMIIDEAHPKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 830
HR + ++A S+ I P + YV+D G K+ +N +T ++ V ISKA+A+Q
Sbjct: 727 HRMCIVATNVAETSITI-----PNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQ 781
Query: 831 XXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFL 890
C+RLY++ + +++PEI R + + VL +K + I+++ +F F
Sbjct: 782 RAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFP 841
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
P L +L+ L LGA++ G LTKLG +M+ FPL P KML+ +++ C+ ++
Sbjct: 842 TSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVI 901
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKN 979
+ S LS+N +F K +++ D KN
Sbjct: 902 ALVSALSIN-QLFVS-KQSLLY-DAHDKN 927
Score = 244 (91.0 bits), Expect = 1.1e-41, Sum P(4) = 1.1e-41
Identities = 72/216 (33%), Positives = 111/216 (51%)
Query: 600 RKWEDEQMSSAIFRVGAKDREHQEQYELLLDN-QIDFIQALSLPGNRDKGEEEMTE---- 654
+ W ++Q+ A VG K H + +DN D ++A +P EE++
Sbjct: 317 KSWANKQILGA--DVGEKS--HDVAPDNKIDNPDADMVRAQRMPRKLKMREEDVEPTADD 372
Query: 655 ---KQKKK----LN----IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIP 703
K +K +N I+E++ +LPI +Q +++ + + V+II G TGSGKTTQ+P
Sbjct: 373 IEIKGRKTTYTIINRPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLP 432
Query: 704 QYLHEAGFTKDKMK----IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE 759
Q+L EAGF+ + + I TQP EE+ +V Y IRF+ +
Sbjct: 433 QFLFEAGFSSPESENPGMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINP 491
Query: 760 RTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
T IK+MTDG L RE S+ L +YS +I+DEAH +
Sbjct: 492 DTAIKFMTDGILLRELSSDFLLTAYSAVIVDEAHER 527
Score = 191 (72.3 bits), Expect = 9.0e-37, Sum P(4) = 9.0e-37
Identities = 39/83 (46%), Positives = 57/83 (68%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
+ +LP+YS L T+ Q K+F +P R ++ATN+AETS+TI NI YV+D G K+ +N
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 207 SRTGMESLTVVPISKASANQRAG 229
+T ++ V ISKA+A+QRAG
Sbjct: 762 EKTSVQKFEVRWISKANADQRAG 784
Score = 86 (35.3 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 39/151 (25%), Positives = 73/151 (48%)
Query: 988 LVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR----VEME---LVS 1040
L LL+ + A ++C EN+++ ++++ ++R+Q+IGL++R VE E L
Sbjct: 971 LSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQL 1030
Query: 1041 NPTETVNI---RKAITAGYFYHIAKLSKSG-SYKTA--KHNQTVMIHPNSSLFEELPRWV 1094
P +V I R+ I + Y +A K Y T ++ V P+ + + +V
Sbjct: 1031 KPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRT-YNIDSEYV 1089
Query: 1095 LY---HELVFTTKEFMRQVTEIESKWLLEVA 1122
+Y HE + + +M +TEI + L +A
Sbjct: 1090 VYLSLHESR-SGRVYMSPLTEISPEHLARLA 1119
Score = 86 (35.3 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 39/151 (25%), Positives = 73/151 (48%)
Query: 1155 LVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQR----VEME---LVS 1207
L LL+ + A ++C EN+++ ++++ ++R+Q+IGL++R VE E L
Sbjct: 971 LSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQL 1030
Query: 1208 NPTETVNI---RKAITAGYFYHIAKLSKSG-SYKTA--KHNQTVMIHPNSSLFEELPRWV 1261
P +V I R+ I + Y +A K Y T ++ V P+ + + +V
Sbjct: 1031 KPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRT-YNIDSEYV 1089
Query: 1262 LY---HELVFTTKEFMRQVTEIESKWLLEVA 1289
+Y HE + + +M +TEI + L +A
Sbjct: 1090 VYLSLHESR-SGRVYMSPLTEISPEHLARLA 1119
Score = 48 (22.0 bits), Expect = 9.8e-22, Sum P(3) = 9.8e-22
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 641 LPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKT- 699
L +++ G++ T K+K K ++ E K LP+ D D+ R ++V+ +E T T
Sbjct: 122 LSSSKNLGKQA-TAKEKLKKSLLEEKLGLPL----SDA-DS-RLYKVVDVETTTTKSSTA 174
Query: 700 -TQIPQ-YLHEAGF 711
T P+ Y +GF
Sbjct: 175 ETNAPEKYSTRSGF 188
Score = 44 (20.5 bits), Expect = 1.1e-41, Sum P(4) = 1.1e-41
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKN 472
TDS++ ++ D SE K+ ++ +TK+
Sbjct: 238 TDSEEFSEDSDNSSEENKDTNEPSTKD 264
Score = 39 (18.8 bits), Expect = 9.0e-37, Sum P(4) = 9.0e-37
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 449 DDDRKERDEFSERLK 463
DD+ K+++E+ R++
Sbjct: 938 DDEIKQKEEYKNRMR 952
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 267 (99.0 bits), Expect = 3.7e-45, Sum P(4) = 3.7e-45
Identities = 57/137 (41%), Positives = 84/137 (61%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++E + LPI +Q +++AV +H ++I+ GETGSGKTTQ+PQ+L+EAG++ + IG T
Sbjct: 241 MQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVT 300
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+P +EM + V Y IR+E +E T IK+MTDG L +E + L
Sbjct: 301 EPRRVAAVAMSQRVAKEMNLSHRV-VSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 359
Query: 782 ASYSVMIIDEAHPK-VY 797
Y V+IIDEAH + VY
Sbjct: 360 LKYKVVIIDEAHERSVY 376
Score = 264 (98.0 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 62/142 (43%), Positives = 83/142 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L Y V+IIDEAHER+++TDIL GL+ IV R+ LKLLI
Sbjct: 344 MTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIM 403
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F++ F PV ++ R+FPV +++ K P DY C + +IH
Sbjct: 404 SATLRVEDFTQNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRML 463
Query: 112 PLGDILVFLTGQEEIET-CNEI 132
P G ILVFLTGQ E+ C +
Sbjct: 464 PAGGILVFLTGQAEVHALCRRL 485
Score = 213 (80.0 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 58/177 (32%), Positives = 89/177 (50%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ ++ TG+ S V +S+ASA+Q C+RLY++ + +
Sbjct: 627 YVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DF 685
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E PEI R + + +L +KAL I +I+F F PP E L+ A E L ALGAL
Sbjct: 686 EQFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPK 745
Query: 917 ---------------LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
+T LGR M+ FP+ P KML S+++ C+ + I + ++V
Sbjct: 746 QERMKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTV 802
Score = 188 (71.2 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 40/83 (48%), Positives = 55/83 (66%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L +LP+YS L + Q ++F P P R V+ATN+AETSLTI I YV+D G K+ ++
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 207 SRTGMESLTVVPISKASANQRAG 229
TG+ S V +S+ASA+QRAG
Sbjct: 641 RVTGVSSFRVTWVSQASADQRAG 663
Score = 148 (57.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 1209 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1257
PTE+ +R+ + AG H+A+ +S +YKT + V IHP+S LF EL
Sbjct: 910 PTESQVTYLRQIMAAGLGDHLARRVQSEDLLDPKWKNAYKTPLLDDPVFIHPSSVLFREL 969
Query: 1258 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1292
P +V+Y E+V TTK +M+ V+ +E +W+ + P Y
Sbjct: 970 PEFVVYQEIVETTKMYMKGVSTVEIQWIPSLLPSY 1004
Score = 148 (57.2 bits), Expect = 3.7e-45, Sum P(4) = 3.7e-45
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 1042 PTET--VNIRKAITAGYFYHIAKLSKS---------GSYKTAKHNQTVMIHPNSSLFEEL 1090
PTE+ +R+ + AG H+A+ +S +YKT + V IHP+S LF EL
Sbjct: 910 PTESQVTYLRQIMAAGLGDHLARRVQSEDLLDPKWKNAYKTPLLDDPVFIHPSSVLFREL 969
Query: 1091 PRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHY 1125
P +V+Y E+V TTK +M+ V+ +E +W+ + P Y
Sbjct: 970 PEFVVYQEIVETTKMYMKGVSTVEIQWIPSLLPSY 1004
Score = 76 (31.8 bits), Expect = 1.0e-37, Sum P(4) = 1.0e-37
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 1138 KMPKTLGKSRAELG-GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIG 1196
+M +T A L GD +VLL A S Q+C N +++++M R +R QL
Sbjct: 831 QMKRTWAGQGASLKLGDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLEIRRLRGQLTT 890
Query: 1197 LVQRV--EMEL-----VSNPTET--VNIRKAITAGYFYHIAKLSKS 1233
V V E L + PTE+ +R+ + AG H+A+ +S
Sbjct: 891 AVNAVCPEAGLFLDPKMQPPTESQVTYLRQIMAAGLGDHLARRVQS 936
Score = 73 (30.8 bits), Expect = 2.0e-37, Sum P(4) = 2.0e-37
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 985 GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRV--EMEL---- 1038
GD +VLL A S Q+C N +++++M R +R QL V V E L
Sbjct: 846 GDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLEIRRLRGQLTTAVNAVCPEAGLFLDP 905
Query: 1039 -VSNPTET--VNIRKAITAGYFYHIAKLSKS 1066
+ PTE+ +R+ + AG H+A+ +S
Sbjct: 906 KMQPPTESQVTYLRQIMAAGLGDHLARRVQS 936
Score = 54 (24.1 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 889 FLDP---PPHETLVLALEQLYALGALNHHGDLTKLGRRM-AEFPLDP 931
FLDP PP E+ V L Q+ A G +H L RR+ +E LDP
Sbjct: 902 FLDPKMQPPTESQVTYLRQIMAAGLGDH------LARRVQSEDLLDP 942
Score = 44 (20.5 bits), Expect = 3.7e-45, Sum P(4) = 3.7e-45
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 633 IDFIQALSLPGNRDKGEEEM--TEKQKKKLNIEETK 666
+D AL LPG + K + ++K++K L +E K
Sbjct: 42 VDASNALVLPGRKKKKTKAPPPSKKERKPLTKKERK 77
Score = 40 (19.1 bits), Expect = 9.5e-45, Sum P(4) = 9.5e-45
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 414 PGCTDRRTQSPCPSCLKVFK--TPKVRAFMGHFLTDSDDDRKERDEFSERL 462
PG ++T++P PS K K T K R + L + + + +R E ++L
Sbjct: 51 PGRKKKKTKAPPPS-KKERKPLTKKERKVLQKVL-EQKEKKSQRAELLQKL 99
Score = 37 (18.1 bits), Expect = 4.8e-27, Sum P(4) = 4.8e-27
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 926 EFPLDPMMGKML-LASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+FP+ K L +C ++ I ML G + + +HA
Sbjct: 432 QFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHA 480
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 370 (135.3 bits), Expect = 3.6e-45, Sum P(3) = 3.6e-45
Identities = 91/243 (37%), Positives = 135/243 (55%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T+G L R+ + L Y+V+I+DE HER L +D+L GL++D+ R DLKL++ SAT+
Sbjct: 166 LTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATI 225
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYY-----------TKAPEAD---YIDACVVSILQ 106
+ F +F+ APV ++PGR FP+D+ + K + D Y+ + Q
Sbjct: 226 NLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDPEPYLKILELIDKQ 285
Query: 107 IHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFL 166
+TQ GD L+FL G EI ++ + ++ IIL ++S L + Q K+F
Sbjct: 286 FPSTQR-GDALIFLNGVAEIS----MVAEHLKNYAELTNGWIILMLHSTLSVEEQDKVFD 340
Query: 167 PTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 226
P RK +L+TN+AETS+TID I +VID G TG + LT +SKASANQ
Sbjct: 341 QAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQ 400
Query: 227 RAG 229
R G
Sbjct: 401 RKG 403
Score = 202 (76.2 bits), Expect = 3.6e-45, Sum P(3) = 3.6e-45
Identities = 80/286 (27%), Positives = 130/286 (45%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+VID G TG + LT +SKASANQ C+RLY+ ++ ++
Sbjct: 367 FVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFE-KM 425
Query: 857 EDNTVPEIQRINLGNAVLMLKALGIN-DLIHFDFLDPPPHETLVLALEQLYALGAL-NHH 914
+D TV EI R++L L + +L + D F F++ P + L LE L L +
Sbjct: 426 DDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKPSEDVLNEGLEVLKFQRVLRSDR 485
Query: 915 GD---LTKLGRRMAEFPLDPMMGKMLLASEKYKCV----EEIVTIASMLSVNGAIFYRPK 967
GD LT LG +++ P++ + KML+ Y CV E ++T+A+ LSV R
Sbjct: 486 GDILTLTALGNMVSKLPVEVPIAKMLV----YGCVVDELEVMLTVAAGLSVQSPFTNRSY 541
Query: 968 DKIIHADTARKNFFMLGGDHLVLLNIYNQW----ADADFSTQWCYENFI-QHR--SMKRA 1020
++ + R + GD L++I+ +W A + +W EN I +HR + +
Sbjct: 542 RELEIVER-RASLTSPLGDPFTLISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKL 600
Query: 1021 RDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKS 1066
R Q++ VE + E + ++ I G + L KS
Sbjct: 601 RAQYRQILEDAGLVEKASAAETGEDDSRQRRIDQGEKRKLFDLKKS 646
Score = 79 (32.9 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 753 FEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
FE S++T + ++T+G L R+ + L Y+V+I+DE H +
Sbjct: 153 FETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHER 195
Score = 52 (23.4 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 1152 GDHLVLLNIYNQW----ADADFSTQWCYENFI-QHR--SMKRARDVREQLIGLVQRVEME 1204
GD L++I+ +W A + +W EN I +HR + + R Q++ VE
Sbjct: 558 GDPFTLISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKLRAQYRQILEDAGLVEKA 617
Query: 1205 LVSNPTETVNIRKAITAGYFYHIAKLSKS 1233
+ E + ++ I G + L KS
Sbjct: 618 SAAETGEDDSRQRRIDQGEKRKLFDLKKS 646
Score = 45 (20.9 bits), Expect = 3.6e-45, Sum P(3) = 3.6e-45
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 1074 HNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVA 1122
H +T+ S F L + Y L+ TTK ++ V + + + L VA
Sbjct: 766 HPETIDPRQGSDGFSRLHQIPFYGLLLETTKPYICNVMPVPAVYTLLVA 814
Score = 45 (20.9 bits), Expect = 4.8e-45, Sum P(4) = 4.8e-45
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 1241 HNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVA 1289
H +T+ S F L + Y L+ TTK ++ V + + + L VA
Sbjct: 766 HPETIDPRQGSDGFSRLHQIPFYGLLLETTKPYICNVMPVPAVYTLLVA 814
Score = 44 (20.5 bits), Expect = 4.6e-45, Sum P(3) = 4.6e-45
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 1206 VSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAK----HNQT---VMIHPNSSLFEELP 1258
+S T V +R I AG + + + L Y + H + IHPNSS+ + P
Sbjct: 709 ISRKTAEV-VRVIIAAGLYPNFSILDPVNKYGYGQEMFTHTRLKPFTQIHPNSSIAQYHP 767
Query: 1259 RWV 1261
+
Sbjct: 768 ETI 770
Score = 44 (20.5 bits), Expect = 4.8e-45, Sum P(4) = 4.8e-45
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 1039 VSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAK----HNQT---VMIHPNSSLFEELP 1091
+S T V +R I AG + + + L Y + H + IHPNSS+ + P
Sbjct: 709 ISRKTAEV-VRVIIAAGLYPNFSILDPVNKYGYGQEMFTHTRLKPFTQIHPNSSIAQYHP 767
Query: 1092 RWV 1094
+
Sbjct: 768 ETI 770
Score = 41 (19.5 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 612 FRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKL 660
+ V + +HQ+ +L ++ +Q LP GE E T+ QK KL
Sbjct: 119 YHVALQFNQHQKFQKL---QKLRKLQK-ELPIAERAGEFETTKSQKTKL 163
Score = 39 (18.8 bits), Expect = 2.1e-27, Sum P(3) = 2.1e-27
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 650 EEMTEKQKKKLNIEETKKSLPIYP 673
E++ ++QK K + E+T+K + P
Sbjct: 989 EKLLKRQKAKEDDEKTEKKPKLEP 1012
Score = 37 (18.1 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 446 TDSDDDRKER-DEFSER----LKNRDKNNTK 471
T DD R+ R D+ +R LK +NN +
Sbjct: 622 TGEDDSRQRRIDQGEKRKLFDLKKSQRNNDR 652
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 426 (155.0 bits), Expect = 7.3e-45, Sum P(2) = 7.3e-45
Identities = 99/240 (41%), Positives = 142/240 (59%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG + R+ L P L YS +IIDEAHER+LH+D+L +++ R + L+L+I
Sbjct: 257 MTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIM 316
Query: 57 SATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAP------EADYIDACVVSILQIHAT 110
SATL A+KF +F++A V + GR FP+++++ DY+ V+ + +H T
Sbjct: 317 SATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLT 376
Query: 111 QPLG-DILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
+P G DILVFLTG EEIE L + L + L+ +P+Y+ L + Q + F TP
Sbjct: 377 EPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTP 436
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
ARKV+++TNIAETS+TI I VID G K F + ++ L V +SKA A QRAG
Sbjct: 437 QGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAG 496
Score = 247 (92.0 bits), Expect = 6.0e-44, Sum P(3) = 6.0e-44
Identities = 58/145 (40%), Positives = 77/145 (53%)
Query: 661 NIEE-TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIG 719
N E+ ++ LPI +Q L+ + + LI+ GETGSGK+TQ+PQ AG I
Sbjct: 152 NYEKFSRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSG-SIA 210
Query: 720 CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP 779
TQP EMG +G VGY +RFE+ T +T I+YMTDG + R+ L P
Sbjct: 211 VTQPRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSP 270
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFC 804
L YS +IIDEAH + D C
Sbjct: 271 LLDKYSCVIIDEAHERSLHSDVLMC 295
Score = 228 (85.3 bits), Expect = 6.0e-44, Sum P(3) = 6.0e-44
Identities = 72/239 (30%), Positives = 112/239 (46%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKV-YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQX 831
R+ + ++A SV I P + VID G K F + ++ L V +SKA A Q
Sbjct: 440 RKVIISTNIAETSVTI-----PGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQR 494
Query: 832 XXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLD 891
KC+RLY+ + H+ E +PEI R NL L L LG+ + +D
Sbjct: 495 AGRAGRDAPGKCYRLYSREDF-HKFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLID 553
Query: 892 PPPHETLVLALEQLYALGALNH-HGD-----LTKLGRRMAEFPLDPMMGKMLLASEKYKC 945
PP + + AL +L +LGA+ + D LT++G +PL P ++L ++K C
Sbjct: 554 PPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGC 613
Query: 946 VEEIVTIASMLSVNGAIFYRPKDKIIHADT--ARKNFFMLGGDHLVLLNIY---NQWAD 999
+ E + I + + + A+F D AD R+ F GDH+ LL + NQ+ D
Sbjct: 614 IMEAIKIVAAMQTD-ALFSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTNQFFD 671
Score = 133 (51.9 bits), Expect = 7.3e-45, Sum P(2) = 7.3e-45
Identities = 48/178 (26%), Positives = 79/178 (44%)
Query: 1133 DSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVRE 1192
D NKK +S A G + L YNQ ++C +N I + +K A + E
Sbjct: 671 DQLNKKT-----ESDARYGKANKSLEREYNQTI-----RKFCNDNMINEQHLKTASMIEE 720
Query: 1193 QL--IGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQ--TVMIH 1248
QL I + Q+V + + +RKA+ G F + + + N T+ IH
Sbjct: 721 QLKQIAIEQKVTFSTCG--ADFMKMRKALALGMFLNSCEYDRQEDRYRLMINPAITLKIH 778
Query: 1249 PNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPR--ELEDSTNK 1304
P+S L P ++++ EL+ T F QVT I+ W+ + + K R L ++T +
Sbjct: 779 PSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDWVRPLISDHKKMRANHLAETTER 836
Score = 130 (50.8 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 37/139 (26%), Positives = 66/139 (47%)
Query: 1005 QWCYENFIQHRSMKRARDVREQL--IGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAK 1062
++C +N I + +K A + EQL I + Q+V + + +RKA+ G F + +
Sbjct: 700 KFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCG--ADFMKMRKALALGMFLNSCE 757
Query: 1063 LSKSGSYKTAKHNQ--TVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLE 1120
+ N T+ IHP+S L P ++++ EL+ T F QVT I+ W+
Sbjct: 758 YDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDWVRP 817
Query: 1121 VAPHYYKPR--ELEDSTNK 1137
+ + K R L ++T +
Sbjct: 818 LISDHKKMRANHLAETTER 836
Score = 43 (20.2 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 22/86 (25%), Positives = 35/86 (40%)
Query: 79 GRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLG-DILVF-LTGQEEIETCNEILQDR 136
G + P + PE D I+A ++ + + A +P+ D F LT + + D
Sbjct: 542 GMKNPHRLKLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDH 601
Query: 137 VRRLGSKIKELIILPVYSNLPTDMQT 162
R L KE I+ + MQT
Sbjct: 602 ARILFQAQKEGCIMEAIK-IVAAMQT 626
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 419 (152.6 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 89/240 (37%), Positives = 142/240 (59%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T+G L R+ + L Y V+I+DE HER LH D L G+++ ++ R DL+L++ SAT+
Sbjct: 255 LTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATI 314
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDAC-------VVSILQ-IHATQP 112
+ + FS +F+DAPV ++PGR FP+ + Y P + + + +LQ I P
Sbjct: 315 NIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYP 374
Query: 113 L---GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTP 169
GD+L+FL+G EI T +Q+ + + + I+LP++S L Q K+F P
Sbjct: 375 QEERGDLLLFLSGVAEIST----IQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAP 430
Query: 170 PNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
P RK +++TNIAETS+TID + +V+D G K+ +F+ + M+ L IS+AS+ QR G
Sbjct: 431 PGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKG 490
Score = 328 (120.5 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 83/265 (31%), Positives = 135/265 (50%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A SV I D +V+D G K+ +F+ + M+ L IS+AS+ Q
Sbjct: 434 RKCIISTNIAETSVTI-DGVR---FVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRK 489
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDP 892
C+RLY+ Y VPEI R+ L + +L +K++G+ D F F+DP
Sbjct: 490 GRAGRTGPGVCYRLYSESDYD-AFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDP 548
Query: 893 PPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTI 952
PP ++ A+ L GAL+ HG+LT +GR +A+ P+D ++GKML+ + VE ++T+
Sbjct: 549 PPASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTV 608
Query: 953 ASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWAD--ADF---STQWC 1007
A+ LSV F R TAR+ GD L+N +N W AD S +WC
Sbjct: 609 AAALSVQSP-FLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWC 667
Query: 1008 YENFIQHRSMKRARDVREQLIGLVQ 1032
++ + + ++R Q L++
Sbjct: 668 RRRGLEEQRLYEMVNLRRQFKELLR 692
Score = 243 (90.6 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 51/147 (34%), Positives = 81/147 (55%)
Query: 651 EMTEKQK-KKLN-IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE 708
+ +KQ KL+ + +KSLPI+ ++ +++ VR H V+++ G+TG GK+TQ+PQYL
Sbjct: 142 DFNQKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLA 201
Query: 709 AGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTD 768
+G I CTQP E + G +VGY IRFE + T + ++T+
Sbjct: 202 SGINN----IACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTE 257
Query: 769 GTLHREFLSEPDLASYSVMIIDEAHPK 795
G L R+ + L Y V+I+DE H +
Sbjct: 258 GLLLRQIQQDASLGQYQVLIVDEVHER 284
Score = 55 (24.4 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 1152 GDHLVLLNIYNQWAD--ADF---STQWCYENFIQHRSMKRARDVREQLIGLVQ 1199
GD L+N +N W AD S +WC ++ + + ++R Q L++
Sbjct: 640 GDPFTLMNTFNAWVQVKADRGSGSRKWCRRRGLEEQRLYEMVNLRRQFKELLR 692
Score = 43 (20.2 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 28/121 (23%), Positives = 46/121 (38%)
Query: 1061 AKLSKSGSYKTAKHNQT---VMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKW 1117
A+L +SGS +A + V L E L R++LY E+ ++ K ++T ++S+
Sbjct: 957 AQLRQSGSCSSAGFGSSGPRVSRRELEKLCEGLVRFLLYTEVNYSLK----RLTALQSQN 1012
Query: 1118 LLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYEN 1177
L + P + P + GG L YN D+ C
Sbjct: 1013 LY-IGPQQDPDLSSAAAIGSLFPGMKAEPDPIKGGLRLCSYFTYNCLCDSQDLYSECLRK 1071
Query: 1178 F 1178
F
Sbjct: 1072 F 1072
Score = 42 (19.8 bits), Expect = 3.0e-44, Sum P(3) = 3.0e-44
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 1226 HIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEF 1273
H A S ++ Q V+IHP +S+F P VL H T EF
Sbjct: 827 HNATRKDSDQVFHTRNKQGVVIHP-TSVFASDPE-VL-HVPEHETSEF 871
Score = 42 (19.8 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 1059 HIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEF 1106
H A S ++ Q V+IHP +S+F P VL H T EF
Sbjct: 827 HNATRKDSDQVFHTRNKQGVVIHP-TSVFASDPE-VL-HVPEHETSEF 871
Score = 41 (19.5 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1228 AKLSKSGSYKTAKHNQT---VMIHPNSSLFEELPRWVLYHELVFTTK 1271
A+L +SGS +A + V L E L R++LY E+ ++ K
Sbjct: 957 AQLRQSGSCSSAGFGSSGPRVSRRELEKLCEGLVRFLLYTEVNYSLK 1003
Score = 40 (19.1 bits), Expect = 2.1e-32, Sum P(5) = 2.1e-32
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 854 HELEDNTVPEIQRINLG 870
HEL++NT ++ R+ G
Sbjct: 730 HELQENTKRKVLRLEEG 746
Score = 38 (18.4 bits), Expect = 2.1e-32, Sum P(5) = 2.1e-32
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 446 TDSDDDRKERDEFSERLK 463
T+ D + R+ F+ER K
Sbjct: 705 TEPQDRARRRERFTERQK 722
Score = 38 (18.4 bits), Expect = 3.3e-32, Sum P(5) = 3.3e-32
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 641 LPGNRDKG---EEEMTEKQKKKLNIEET 665
L G+ G EE T ++K+K E+T
Sbjct: 747 LEGDASSGSDAEESSTSRKKRKDGAEQT 774
>DICTYBASE|DDB_G0268212 [details] [associations]
symbol:DDB_G0268212 "putative DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 dictyBase:DDB_G0268212 GO:GO:0005524
EMBL:AAFI02000003 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 RefSeq:XP_647649.1
ProteinModelPortal:Q55F84 IntAct:Q55F84 EnsemblProtists:DDB0233906
GeneID:8616466 KEGG:ddi:DDB_G0268212 Uniprot:Q55F84
Length = 455
Score = 476 (172.6 bits), Expect = 4.6e-44, P = 4.6e-44
Identities = 128/461 (27%), Positives = 229/461 (49%)
Query: 675 KQDLIDAVRDHQVLIIEGETGSGKTTQIPQ-YLHEAGFTKDKMKIGCTQPXXXXXXXXXX 733
K++++ + ++LII G + K ++IP+ +L++ K I CT+
Sbjct: 3 KKEILSLLEIKKILIIVGGDKTEKASEIPKLFLNDNPTNKT---IVCTEAKRSNAIKLAE 59
Query: 734 XXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAH 793
++M ++G VGY IRFE+ S + IK++TDG L RE + +P L +YS++IID+
Sbjct: 60 LVSKQMNEQVGKTVGYGIRFEEKVSNESKIKFITDGLLVREMIVDPLLNNYSILIIDQVD 119
Query: 794 PKVYVIDPGFCKQNNFN-SRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAY 852
+ D S T L +V ++ ++N L
Sbjct: 120 ERSLSTDLLLALLKKLEISTTKRPDLKIVILTSTNSN-ANEIKNFFGSDNVSTLSFGNED 178
Query: 853 KHELEDNTVPEIQRI-NLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL 911
T PEI++ NL +L LK+ I++L F+ + P E + +L +L+ LGA+
Sbjct: 179 SSITTTTTTPEIEKCKNLTPFILQLKSFNIDNLKSFEMITSPSLELINQSLNELFRLGAI 238
Query: 912 NHHGD-----LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRP 966
+ + D LT +G M PL+P+ K+++ SEK C E+I+ I SML +N
Sbjct: 239 SSNQDNGSSKLTSIGNTMVGLPLEPIYSKVIIESEKLGCSEQILNIISMLLINNK----- 293
Query: 967 KDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQ 1026
D I++ + DHL LLN+YN + S WC +N I ++++ + ++ Q
Sbjct: 294 NDLFINSKLSSSALIDSQSDHLTLLNVYNSFISNKCSPIWCNDNQINFQTIQTVQQIKNQ 353
Query: 1027 LIGLVQRVEMELVS-------NPTETVNIRKAITAGYFYHIAKLSKSGSYKT-AKHNQTV 1078
L+ + +V ++L+S + T +I+K+ +G+F ++AK + SY+T + + V
Sbjct: 354 LLNCLTKVSVKLLSCNDDGSSSKQSTDHIKKSFLSGFFNNVAKSTTDNSYETIVEPIRKV 413
Query: 1079 MIHPNSSLFEELPRWVLYHELV-FTTKEFMRQVTEIESKWL 1118
++HP SS+ E ++VL+ E E+++ V+ I+ WL
Sbjct: 414 LLHPTSSVVPESNQFVLFGETFKIDRSEYIKDVSVIDQSWL 454
Score = 195 (73.7 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 42/142 (29%), Positives = 81/142 (57%)
Query: 1153 DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS----- 1207
DHL LLN+YN + S WC +N I ++++ + ++ QL+ + +V ++L+S
Sbjct: 313 DHLTLLNVYNSFISNKCSPIWCNDNQINFQTIQTVQQIKNQLLNCLTKVSVKLLSCNDDG 372
Query: 1208 --NPTETVNIRKAITAGYFYHIAKLSKSGSYKT-AKHNQTVMIHPNSSLFEELPRWVLYH 1264
+ T +I+K+ +G+F ++AK + SY+T + + V++HP SS+ E ++VL+
Sbjct: 373 SSSKQSTDHIKKSFLSGFFNNVAKSTTDNSYETIVEPIRKVLLHPTSSVVPESNQFVLFG 432
Query: 1265 ELV-FTTKEFMRQVTEIESKWL 1285
E E+++ V+ I+ WL
Sbjct: 433 ETFKIDRSEYIKDVSVIDQSWL 454
Score = 147 (56.8 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 58/201 (28%), Positives = 95/201 (47%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDI---VRFRSDLKLLISS 57
+TDG L RE + +P L +YS++IID+ ER+L TD+L L+K + R DLK++I +
Sbjct: 92 ITDGLLVREMIVDPLLNNYSILIIDQVDERSLSTDLLLALLKKLEISTTKRPDLKIVILT 151
Query: 58 AT-LDAQKFSEFFDDAPVFRIP-GRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGD 115
+T +A + FF V + G T PE + ILQ+ + + +
Sbjct: 152 STNSNANEIKNFFGSDNVSTLSFGNEDSSITTTTTTPEIEKCKNLTPFILQLKSFN-IDN 210
Query: 116 ILVF-LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
+ F + +E N+ L + + RLG+ S L + T + LP P K
Sbjct: 211 LKSFEMITSPSLELINQSLNE-LFRLGAISSNQD--NGSSKLTSIGNTMVGLPLEPIYSK 267
Query: 175 VVLATNIAETSLTIDNIIYVI 195
V++ + S I NII ++
Sbjct: 268 VIIESEKLGCSEQILNIISML 288
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 353 (129.3 bits), Expect = 5.2e-44, Sum P(2) = 5.2e-44
Identities = 108/381 (28%), Positives = 187/381 (49%)
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGME 816
+ +R I +G R+ + ++A S+ I D VYVID G K+ ++++
Sbjct: 622 SEQRLIFDRPPEGI--RKIVLATNMAETSITINDV----VYVIDCGKAKETSYDALNNTP 675
Query: 817 SLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 876
L ISKA+A Q +C+ LY Y+ D PE+ R L + L +
Sbjct: 676 CLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYE-AFADYQQPELLRTPLQSLCLQI 734
Query: 877 KALGINDLIHF--DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMG 934
K+LG+ + F L PP ++ A+E L +GAL+ +LT LG+ ++ P++P +G
Sbjct: 735 KSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLG 794
Query: 935 KMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLG-GDHLVLLNI 993
KML+ + C++ ++T+ + LSV F P DK A+TAR F DHL L+
Sbjct: 795 KMLILGAIFNCLDPVMTVVAGLSVRDP-FLMPFDKKDLAETARSKFSGRDYSDHLTLVRA 853
Query: 994 YNQWADADFSTQ---WCYENFIQHRSMKRARDVREQLIGLVQRVEM----ELVSNPTETV 1046
YN W DA+ + +C++NF+ +++K +R+Q L++ + E S +
Sbjct: 854 YNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDE 913
Query: 1047 N-IRKAITAGYFYHIAKL---SKSGSYKTAKHNQTVMIHPNSSLFEELPR----WVLYHE 1098
+ +R I AG F + + KS + KT + Q V+++ +SS+ +P W+++++
Sbjct: 914 HLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQ-VLLY-SSSVNGNVPMIPFPWLVFND 971
Query: 1099 LVFTTKEFMRQVTEIESKWLL 1119
V F+R T + LL
Sbjct: 972 KVKVNSVFLRDSTAVSDSVLL 992
Score = 207 (77.9 bits), Expect = 5.2e-44, Sum P(2) = 5.2e-44
Identities = 45/133 (33%), Positives = 68/133 (51%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQ 722
+K+LP Y K L+ A+ +QV+++ GETG GKTTQ+PQY+ E+ + I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 723 PXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLA 782
P E G ++G VGY +R E T + + T G L R L + L
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 783 SYSVMIIDEAHPK 795
+ +++DE H +
Sbjct: 416 GVTHVVVDEIHER 428
Score = 189 (71.6 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 59/178 (33%), Positives = 97/178 (54%)
Query: 52 KLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQ 111
K LISSA DA + ++F FR R + + + + I+ + I++ +
Sbjct: 525 KSLISSAVEDALEAADF--KGYNFRT---RDSLSCWSPDSIGFNLIENVLCHIVK--GER 577
Query: 112 PLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPN 171
P G +LVF+TG ++I + L+ LG K +++L + ++ + Q IF P
Sbjct: 578 P-GAVLVFMTGWDDINSLKNQLEAH-SLLGDPNK-VLLLACHGSMASSEQRLIFDRPPEG 634
Query: 172 ARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK+VLATN+AETS+TI++++YVID G K+ ++++ L ISKA+A QR G
Sbjct: 635 IRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRG 692
Score = 177 (67.4 bits), Expect = 7.3e-41, Sum P(2) = 7.3e-41
Identities = 37/97 (38%), Positives = 59/97 (60%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R L + L + +++DE HER ++ D L ++KD++ R DLKL++ SATL+
Sbjct: 400 TTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLN 459
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYID 98
A+ FS +F AP IPG +PV ++ + DY++
Sbjct: 460 AELFSSYFGGAPAMHIPGFTYPVRAHFLE----DYLE 492
Score = 126 (49.4 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 45/183 (24%), Positives = 85/183 (46%)
Query: 1119 LEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQ---WCY 1175
L V + P + +D K G+ + DHL L+ YN W DA+ + +C+
Sbjct: 816 LSVRDPFLMPFDKKDLAETARSKFSGRDYS----DHLTLVRAYNGWKDAERTHSGYDYCW 871
Query: 1176 ENFIQHRSMKRARDVREQLIGLVQRVEM----ELVSNPTETVN-IRKAITAGYFYHIAKL 1230
+NF+ +++K +R+Q L++ + E S + + +R I AG F + +
Sbjct: 872 KNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVCSV 931
Query: 1231 ---SKSGSYKTAKHNQTVMIHPNSSLFEELPR----WVLYHELVFTTKEFMRQVTEIESK 1283
KS + KT + Q V+++ +SS+ +P W+++++ V F+R T +
Sbjct: 932 VNKEKSITLKTMEDGQ-VLLY-SSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDS 989
Query: 1284 WLL 1286
LL
Sbjct: 990 VLL 992
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 323 (118.8 bits), Expect = 7.9e-44, Sum P(3) = 7.9e-44
Identities = 95/318 (29%), Positives = 158/318 (49%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + ++T +S A+A Q
Sbjct: 568 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRK 623
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDN-TVPEIQRINLGNAVLMLKALGINDLIHF--DF 889
KC+ LY + L DN +PEIQR L L +K L + + F
Sbjct: 624 GRAGRVSPGKCYHLYNG--LRASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKT 681
Query: 890 LDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEI 949
+DPP + LA+ L L AL+ LT LG +A P++P +GKM+L C++ +
Sbjct: 682 MDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPV 741
Query: 950 VTIASMLSVNGAIFYRP--KDKIIHADTARKNFFMLG-GDHLVLLNIYNQWADAD----- 1001
+TIA+ LS F+ P K+KI AD RK F DHL ++N + W DA
Sbjct: 742 LTIAASLSFKDP-FFIPLGKEKI--ADQRRKMFSQNSRSDHLSIVNAFLGWEDAKRQGSR 798
Query: 1002 FSTQWCYENFIQHRSMKRARDVREQLIGLVQR---VEMELVSNPTETVN------IRKAI 1052
F ++C++NF+ +++ ++++ Q + R V + +P+ +N ++ I
Sbjct: 799 FEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPKDPSSNINSENKKLVKAVI 858
Query: 1053 TAGYFYHIAKLSKSGSYK 1070
AG + +AK+S S + K
Sbjct: 859 VAGLYPKVAKISPSHNKK 876
Score = 232 (86.7 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 57/145 (39%), Positives = 88/145 (60%)
Query: 95 DYIDACVVSILQIH--ATQPLGDILVFLTGQEEIETCNEILQ-DRVRRLGSKIKELIILP 151
D ID + + L H + G ILVFL G + I T N++L D++ + G II+P
Sbjct: 482 DNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRY--RFIIIP 539
Query: 152 VYSNLPTDMQTKI-------FLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNN 204
++S +PT QT++ F PP RK+V+ATNIAETS+TID+++YVID G K+ +
Sbjct: 540 LHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETH 599
Query: 205 FNSRTGMESLTVVPISKASANQRAG 229
F+++ + ++T +S A+A QR G
Sbjct: 600 FDTQNNIRTMTAEWVSIANAKQRKG 624
Score = 203 (76.5 bits), Expect = 7.9e-44, Sum P(3) = 7.9e-44
Identities = 38/86 (44%), Positives = 62/86 (72%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+P L+S + +++DE HER++ +DIL +VKD++ R DLK+++ SATL+
Sbjct: 324 TTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLN 383
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFS++F++ P+ IPG FPV Y
Sbjct: 384 AEKFSKYFNNCPMIHIPGYTFPVTEY 409
Score = 183 (69.5 bits), Expect = 9.6e-42, Sum P(3) = 9.6e-42
Identities = 53/200 (26%), Positives = 95/200 (47%)
Query: 603 EDEQMSSAI-FRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLN 661
+DE+ AI R K+ ++ E LL D +Q L K +++ E +
Sbjct: 157 KDEKQEDAIKSRASLKEELNETNLEYLLQ---DVVQIPFLDEELKK-DQQKKEDNAAYIE 212
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKI 718
+ + +K LP Y +++L+ + ++VL+I GETG GKTTQ+ Q++ + + + ++
Sbjct: 213 MLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRV 272
Query: 719 GCTQPXXXXXXXXXXXXXEEMG--VKLGCEVGYAIRFED-CTSERTIIKYMTDGTLHREF 775
CTQP E V G GY IR + ++ + Y T G + +
Sbjct: 273 VCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWL 332
Query: 776 LSEPDLASYSVMIIDEAHPK 795
S+P L+S + +++DE H +
Sbjct: 333 HSDPYLSSITHLVLDEIHER 352
Score = 97 (39.2 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 1153 DHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVREQLIGLVQR---VEME 1204
DHL ++N + W DA F ++C++NF+ +++ ++++ Q + R V +
Sbjct: 778 DHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSK 837
Query: 1205 LVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKT-------AKHNQTVMIHPNS 1251
+P+ +N ++ I AG + +AK+S S + K K + V IHP S
Sbjct: 838 DPKDPSSNINSENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHPKS 897
Query: 1252 SLFEE 1256
EE
Sbjct: 898 VNAEE 902
Score = 81 (33.6 bits), Expect = 7.9e-44, Sum P(3) = 7.9e-44
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 1048 IRKAITAGYFYHIAKLSKSGSYKT-------AKHNQTVMIHPNSSLFEELP---RWVLYH 1097
++ I AG + +AK+S S + K K + V IHP S EE +W++YH
Sbjct: 854 VKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHPKSVNAEETQFQYKWLVYH 913
Query: 1098 ELVFTTKEFMRQVTEIESKWLL 1119
+ TT F+ TE+ LL
Sbjct: 914 LKMKTTSIFLYDCTEVSPFSLL 935
Score = 81 (33.6 bits), Expect = 7.9e-44, Sum P(3) = 7.9e-44
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 1215 IRKAITAGYFYHIAKLSKSGSYKT-------AKHNQTVMIHPNSSLFEELP---RWVLYH 1264
++ I AG + +AK+S S + K K + V IHP S EE +W++YH
Sbjct: 854 VKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHPKSVNAEETQFQYKWLVYH 913
Query: 1265 ELVFTTKEFMRQVTEIESKWLL 1286
+ TT F+ TE+ LL
Sbjct: 914 LKMKTTSIFLYDCTEVSPFSLL 935
Score = 44 (20.5 bits), Expect = 5.7e-40, Sum P(3) = 5.7e-40
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 1114 ESKWLLE---VAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFS 1170
E+K L++ VA Y K ++ S NKK P + K + G + I+ + +A+
Sbjct: 849 ENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPV-KVYTKADGK----VCIHPKSVNAE-E 902
Query: 1171 TQWCYENFIQHRSMK 1185
TQ+ Y+ + H MK
Sbjct: 903 TQFQYKWLVYHLKMK 917
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 265 (98.3 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 56/137 (40%), Positives = 85/137 (62%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++ + LPI +Q +++ + ++ ++I+ GETGSGKTTQ+PQ+L+EAG+ + KM IG T
Sbjct: 253 VQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKM-IGVT 311
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
+P EM + EV Y IRFE + T IK+MTDG L +E ++ L
Sbjct: 312 EPRRVAAIAMSKRVAHEMNLPES-EVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLL 370
Query: 782 ASYSVMIIDEAHPK-VY 797
+ YSV+I+DEAH + VY
Sbjct: 371 SKYSVIILDEAHERSVY 387
Score = 253 (94.1 bits), Expect = 3.9e-43, Sum P(4) = 3.9e-43
Identities = 61/147 (41%), Positives = 91/147 (61%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFR----SDLKLLIS 56
MTDG L +E ++ L+ YSV+I+DEAHER+++TDIL GL+ IV R LKL+I
Sbjct: 355 MTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIM 414
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQP 112
SATL F+E F P+ ++ R+FPV I++ K DY+ L+IH P
Sbjct: 415 SATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLP 474
Query: 113 LGDILVFLTGQEEIETCNEILQDRVRR 139
G IL+F+TGQ+E+ N++++ ++RR
Sbjct: 475 EGGILIFVTGQQEV---NQLVR-KLRR 497
Score = 228 (85.3 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 64/201 (31%), Positives = 99/201 (49%)
Query: 772 HREFLSEPDLASYSVMIIDEAH-----PKV-YVIDPGFCKQNNFNSRTGMESLTVVPISK 825
+R FL PD V+ + A P + YV+D G K ++ TG+ + V SK
Sbjct: 632 NRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSK 691
Query: 826 ASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLI 885
ASA+Q C+RLY++ Y ED + P+IQ+ + + +L ++ +GI+ ++
Sbjct: 692 ASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVV 751
Query: 886 HFDFLDPPPHETLVLALEQLYALGALN----HHGDL----TKLGRRMAEFPLDPMMGKML 937
HF F PP L A +L LGAL + DL T+LG ++ FP+ P GKML
Sbjct: 752 HFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKML 811
Query: 938 LASEKYKCVEEIVTIASMLSV 958
S + + V + + LSV
Sbjct: 812 ALSHQQNLLPYTVCLVAALSV 832
Score = 198 (74.8 bits), Expect = 3.9e-43, Sum P(4) = 3.9e-43
Identities = 50/111 (45%), Positives = 71/111 (63%)
Query: 123 QEEIETCN--EI-LQDRVRRLGSKIKE-LIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
QE +E N E+ L+D +GS ++ L +LP+YS L ++ Q +IFLP P R V++
Sbjct: 590 QEGLEEDNDDELGLEDE-SGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVS 648
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TN+AETSLTI +I YV+D G K ++ TG+ + V SKASA+QRAG
Sbjct: 649 TNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAG 699
Score = 114 (45.2 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 1235 SYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVF-----TTKEFMRQVTEIESKWLLEVA 1289
+Y A + +H +S L ++ P WV+Y E +TK F+R +T IE +WLL
Sbjct: 979 AYNCADMEEPAFLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYV 1038
Query: 1290 PHYYKPRELEDSTNKKMPKTLGK 1312
P RE+ + + KT GK
Sbjct: 1039 PLLCNIREVREDPAPRFDKTSGK 1061
Score = 114 (45.2 bits), Expect = 3.9e-43, Sum P(4) = 3.9e-43
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 1068 SYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVF-----TTKEFMRQVTEIESKWLLEVA 1122
+Y A + +H +S L ++ P WV+Y E +TK F+R +T IE +WLL
Sbjct: 979 AYNCADMEEPAFLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYV 1038
Query: 1123 PHYYKPRELEDSTNKKMPKTLGK 1145
P RE+ + + KT GK
Sbjct: 1039 PLLCNIREVREDPAPRFDKTSGK 1061
Score = 89 (36.4 bits), Expect = 3.9e-43, Sum P(4) = 3.9e-43
Identities = 44/170 (25%), Positives = 80/170 (47%)
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIF----YRPKDKIIH 972
+T+LG ++ FP+ P GKML S + + V + + LSV + R +D
Sbjct: 791 VTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAPG 850
Query: 973 ADT---ARKNF-----FMLGGDHLVLLNIYN--QWADADFST-QWCYENFIQHRSMKRAR 1021
A+ R+++ + L GD +VLL ++A + ++C N ++ ++M R
Sbjct: 851 ANRFHRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVR 910
Query: 1022 DVREQL---IGL-VQRVEMEL---VSNPTETVN--IRKAITAGYFYHIAK 1062
+R QL I L V VE+ + + PT+ +R+ + AG +A+
Sbjct: 911 KLRVQLTNEINLNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRVAR 960
Score = 51 (23.0 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 1136 NKKMPKTLGKSRAELGGDHLVLLNIYN--QWADADFST-QWCYENFIQHRSMKRARDVRE 1192
++K +L GD +VLL ++A + ++C N ++ ++M R +R
Sbjct: 855 HRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVRKLRV 914
Query: 1193 QL---IGL-VQRVEMEL---VSNPTETVN--IRKAITAGYFYHIAK 1229
QL I L V VE+ + + PT+ +R+ + AG +A+
Sbjct: 915 QLTNEINLNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRVAR 960
Score = 43 (20.2 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 503 KLRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQE 539
KL +E + KRK V +E D D++ S+++
Sbjct: 162 KLLVEEEEELQAKRKNPNVISVEED--DEDSSSSDED 196
Score = 40 (19.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 117 LVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNL 156
L+ L E +T N L V RLG I + P + +
Sbjct: 771 LIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKM 810
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 320 (117.7 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 107/367 (29%), Positives = 170/367 (46%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYV+D G K+ ++++ + L ISKASA+Q
Sbjct: 561 RKIVLATNIAESSITIDDV----VYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRR 616
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+RLY Y +PEI R L L +K+L + + F L
Sbjct: 617 GRAGRVQAGVCYRLYPKVIYD-AFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKAL 675
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
PP + A+E L +GALN +LT LGR + P+DP +GKMLL ++CV +
Sbjct: 676 QPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPAL 735
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKNFFMLG-GDHLVLLNIYNQWADADFS---TQW 1006
TIA+ L+ F P ++ AD A++ F DH+ LL Y + DA +
Sbjct: 736 TIAAALAYRSP-FVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDF 794
Query: 1007 CYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT-------ETVNIRKAITAGYFYH 1059
C++NF+ +++ D+R Q + L+ + S P + I + AG + +
Sbjct: 795 CWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPN 854
Query: 1060 IAKLSKSGSYKTAKHNQT---VMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTE 1112
+ + + G +TA + + V IHP S LP +++Y E V TT ++R T
Sbjct: 855 VVQCKRRGK-RTAFYTKELGKVDIHPGSVNARVNLFSLP-YLVYSEKVKTTSVYIRDSTN 912
Query: 1113 IESKWLL 1119
I LL
Sbjct: 913 ISDYALL 919
Score = 238 (88.8 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 56/137 (40%), Positives = 85/137 (62%)
Query: 93 EADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPV 152
+ D ++A + I ++ G ILVFLTG +EI E + LG K ++LP+
Sbjct: 486 DVDLVEATIEHICRLEGG---GAILVFLTGWDEISKLLEKINMN-NFLGDSSK-FLVLPL 540
Query: 153 YSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGME 212
+ ++PT Q +IF PPN RK+VLATNIAE+S+TID+++YV+D G K+ ++++ +
Sbjct: 541 HGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVA 600
Query: 213 SLTVVPISKASANQRAG 229
L ISKASA+QR G
Sbjct: 601 CLLPSWISKASAHQRRG 617
Score = 232 (86.7 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 50/152 (32%), Positives = 82/152 (53%)
Query: 650 EEMTEKQKKKLNIEETK---KSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYL 706
+E EK K +++ K + LP + K++ +++V +QVL++ GETG GKTTQ+PQ++
Sbjct: 206 KERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFI 265
Query: 707 HEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTII 763
E + + I CTQP E G +G VGY IR E S++T +
Sbjct: 266 LEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRL 325
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
+ T G L R + +P+L + S +++DE H +
Sbjct: 326 LFCTTGVLLRRLIEDPNLTNVSHLLVDEIHER 357
Score = 181 (68.8 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 33/83 (39%), Positives = 55/83 (66%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R + +P+L + S +++DE HER ++ D L +++D++ R DL+L++ SAT++
Sbjct: 329 TTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATIN 388
Query: 62 AQKFSEFFDDAPVFRIPGRRFPV 84
A FS +F ++P IPG FPV
Sbjct: 389 ADMFSTYFGNSPTMHIPGFTFPV 411
Score = 111 (44.1 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 1153 DHLVLLNIYNQWADADFS---TQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP 1209
DH+ LL Y + DA +C++NF+ +++ D+R Q + L+ + S P
Sbjct: 771 DHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKP 830
Query: 1210 T-------ETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQT---VMIHPNS-----SLF 1254
+ I + AG + ++ + + G +TA + + V IHP S +LF
Sbjct: 831 NAYNQYSYDMEMISAVLCAGLYPNVVQCKRRGK-RTAFYTKELGKVDIHPGSVNARVNLF 889
Query: 1255 EELPRWVLYHELVFTTKEFMRQVTEIESKWLL 1286
LP +++Y E V TT ++R T I LL
Sbjct: 890 S-LP-YLVYSEKVKTTSVYIRDSTNISDYALL 919
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 307 (113.1 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 91/313 (29%), Positives = 154/313 (49%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + +A SV I D VYVI+ G K N++ T ++SL V ++KA+ Q
Sbjct: 483 RKVIISTIIAETSVTIDDV----VYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRR 538
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ L++ A + ++D PEI R L + +L LK L I+D F +
Sbjct: 539 GRAGRVRPGICYNLFSR-AREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLI 597
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
+ P E + + +E L + AL+ G LT LG +A+ P+DP MGKM+L S + C++ I
Sbjct: 598 NAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPIT 657
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADADFS---TQW 1006
+ A+ LS FY P K D ++ + DHL++ N + D+ +S +
Sbjct: 658 SAAAALSFKSP-FYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDF 716
Query: 1007 CYENFIQHRSMKRARDVREQLIGLVQRVEM-------ELVSNP-TETVNIRKAIT-AGYF 1057
CY+NF+ ++++ ++ Q L+ + + SN +E + + +AI AG +
Sbjct: 717 CYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLY 776
Query: 1058 YHIAKLSKSGSYK 1070
++A L KS K
Sbjct: 777 PNMAHLRKSRQIK 789
Score = 243 (90.6 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 57/152 (37%), Positives = 82/152 (53%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G+ ++ E KK+L E +K LP + D+I AVR++QV++I G TG GKTTQ+PQ L
Sbjct: 135 GQRQLEENAKKRL---EARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILL 191
Query: 708 EAGFTK---DKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTS-ERTII 763
+ ++ +I CTQP E LG VGY IR E + ER I
Sbjct: 192 DDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASI 251
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y T G L ++ S+P + + SV+I+DE H +
Sbjct: 252 TYCTTGVLLQQLQSDPLMHNLSVLILDEIHER 283
Score = 205 (77.2 bits), Expect = 4.7e-30, Sum P(3) = 4.7e-30
Identities = 47/134 (35%), Positives = 76/134 (56%)
Query: 97 IDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKE-LIILPVYSN 155
ID + I +P G ILVFL G ++I IL G + ++ + + P++S
Sbjct: 406 IDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSL 465
Query: 156 LPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLT 215
+ + Q +F P RKV+++T IAETS+TID+++YVI+ G K N++ T ++SL
Sbjct: 466 MQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLD 525
Query: 216 VVPISKASANQRAG 229
V ++KA+ QR G
Sbjct: 526 EVWVTKANTQQRRG 539
Score = 202 (76.2 bits), Expect = 4.7e-30, Sum P(3) = 4.7e-30
Identities = 39/87 (44%), Positives = 61/87 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L ++ S+P + + SV+I+DE HER++ TD+L GL+K I+ R DLK+++ SAT+
Sbjct: 255 TTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVR 314
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
Q F ++F++ P+FRI G FPV + Y
Sbjct: 315 EQDFCDYFNNCPMFRIEGVMFPVKMLY 341
Score = 71 (30.1 bits), Expect = 4.7e-30, Sum P(3) = 4.7e-30
Identities = 27/125 (21%), Positives = 60/125 (48%)
Query: 1125 YYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFS---TQWCYENFIQH 1181
+Y P E ++ + + + ++ + DHL++ N + D+ +S +CY+NF+
Sbjct: 669 FYSPLGKESRVDE-IKRRMARN---MRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSS 724
Query: 1182 RSMKRARDVREQLIGLVQRVEM-------ELVSNP-TETVNIRKAIT-AGYFYHIAKLSK 1232
++++ ++ Q L+ + + SN +E + + +AI AG + ++A L K
Sbjct: 725 MTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAHLRK 784
Query: 1233 SGSYK 1237
S K
Sbjct: 785 SRQIK 789
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 302 (111.4 bits), Expect = 5.6e-43, Sum P(4) = 5.6e-43
Identities = 88/311 (28%), Positives = 152/311 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + +++ +SKA+A Q
Sbjct: 531 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 586
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY L+D +PEI R L L +K L + + +F +
Sbjct: 587 GRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 645
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP +E ++L++ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 646 DPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 705
Query: 951 TIASMLSVNGAIFYRP--KDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADAD-----F 1002
TIA+ LS F P K+KI AD RK DHL ++N + W +A +
Sbjct: 706 TIAASLSFKDP-FVIPLGKEKI--ADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRY 762
Query: 1003 STQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEMELVSNPTETVN------IRKAI 1052
+C+E F+ +++ +++ E L+G V +P +N I+ I
Sbjct: 763 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSSRNPKDPESNINSDNEKIIKAVI 821
Query: 1053 TAGYFYHIAKL 1063
AG + +AK+
Sbjct: 822 CAGLYPKVAKI 832
Score = 218 (81.8 bits), Expect = 5.6e-43, Sum P(4) = 5.6e-43
Identities = 42/86 (48%), Positives = 62/86 (72%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+P L+S S +++DE HER L +D+L +VKD++ FRSDLK+++ SATL+
Sbjct: 311 TTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLN 370
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+F + P+ IPG FPV Y
Sbjct: 371 AEKFSEYFGNCPMIHIPGFTFPVVEY 396
Score = 188 (71.2 bits), Expect = 5.1e-38, Sum P(4) = 5.1e-38
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 629 LDNQIDFIQALSLP-GNRDKGEEEMTEKQKKKLN---IEETKKSLPIYPFKQDLIDAVRD 684
+D +++ + P G D+ E +K+K L ++ ++ LP Y +++L++ + +
Sbjct: 163 IDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDN 222
Query: 685 HQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEEMGV 741
HQV +I GETG GKTTQ+ Q++ + + K +I CTQP E
Sbjct: 223 HQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAE 282
Query: 742 KLGC--EVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
G GY IR + ++ I Y T G + + S+P L+S S +++DE H +
Sbjct: 283 SCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHER 339
Score = 180 (68.4 bits), Expect = 6.9e-30, Sum P(4) = 6.9e-30
Identities = 36/88 (40%), Positives = 60/88 (68%)
Query: 142 SKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCK 201
S + +L++ V T +++F TPP RK+V+ATNIAETS+TID+++YVID G K
Sbjct: 502 STLHDLLMSQVMFKSGT--MSQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 559
Query: 202 QNNFNSRTGMESLTVVPISKASANQRAG 229
+ +F+++ + +++ +SKA+A QR G
Sbjct: 560 ETHFDTQNNISTMSAEWVSKANAKQRKG 587
Score = 67 (28.6 bits), Expect = 5.6e-43, Sum P(4) = 5.6e-43
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 1039 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1091
+++ E + I+ I AG + +AK L+ K K + +T V +HP S E+
Sbjct: 809 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDF 867
Query: 1092 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1119
W++YH + T+ ++ TE+ LL
Sbjct: 868 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 897
Score = 67 (28.6 bits), Expect = 5.6e-43, Sum P(4) = 5.6e-43
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 1206 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1258
+++ E + I+ I AG + +AK L+ K K + +T V +HP S E+
Sbjct: 809 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDF 867
Query: 1259 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1286
W++YH + T+ ++ TE+ LL
Sbjct: 868 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 897
Score = 67 (28.6 bits), Expect = 6.9e-30, Sum P(4) = 6.9e-30
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 1153 DHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEM 1203
DHL ++N + W +A + +C+E F+ +++ +++ E L+G V
Sbjct: 741 DHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSS 799
Query: 1204 ELVSNPTETVN------IRKAITAGYFYHIAKL 1230
+P +N I+ I AG + +AK+
Sbjct: 800 RNPKDPESNINSDNEKIIKAVICAGLYPKVAKI 832
Score = 58 (25.5 bits), Expect = 5.6e-43, Sum P(4) = 5.6e-43
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 93 EADYIDA-CVVSILQ-IHATQPLGDILVFLTGQEEIETCNEILQDRV 137
E D +D +V++++ I + G ILVFL G + I T +++L +V
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 512
Score = 40 (19.1 bits), Expect = 5.1e-38, Sum P(4) = 5.1e-38
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 503 KLRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQE 539
KL I+ ++ +++K ++ D EYL E E
Sbjct: 139 KLDIQEKKLINQEKKMFRIRNRSYIDRDSEYLLQENE 175
Score = 40 (19.1 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E+I
Sbjct: 681 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI 726
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 269 (99.8 bits), Expect = 3.6e-42, Sum P(3) = 3.6e-42
Identities = 59/183 (32%), Positives = 104/183 (56%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV D G K+ ++ TG++S V ISKASANQ C+RLY++ Y+ +L
Sbjct: 721 YVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDL 780
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
++ +PE+ R +L VL LK++ + +++F F PP ++LV + + L + A++ G
Sbjct: 781 DEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKYISAVSEEGR 840
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTA 976
+T++G M+ FPL P ++LL ++ C+ VT+ + LS IF P+++ I A
Sbjct: 841 VTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSA-AEIFI-PENQAIPQLAA 898
Query: 977 RKN 979
+++
Sbjct: 899 KED 901
Score = 250 (93.1 bits), Expect = 3.6e-42, Sum P(3) = 3.6e-42
Identities = 53/138 (38%), Positives = 82/138 (59%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF-TKDKMK--- 717
I+ + +LP+ +Q +++A+ ++ ++++ G TGSGKTTQIPQ+L EAG+ + D
Sbjct: 350 IQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGM 409
Query: 718 IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS 777
IG TQP EE+G +VGY IRFE ++ T +K+MTDG L RE
Sbjct: 410 IGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQ 468
Query: 778 EPDLASYSVMIIDEAHPK 795
+ L YS +++DEAH +
Sbjct: 469 DLALRKYSAIVVDEAHER 486
Score = 238 (88.8 bits), Expect = 4.9e-40, Sum P(4) = 4.9e-40
Identities = 55/148 (37%), Positives = 85/148 (57%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD---------- 50
MTDG L RE + L YS +++DEAHER+++TDIL G++ I++ R++
Sbjct: 457 MTDGVLLREVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKP 516
Query: 51 LKLLISSATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQ 106
LKL+I SATL + +E F PV + GR++PV +++ + DY++ I +
Sbjct: 517 LKLVIMSATLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISR 576
Query: 107 IHATQPLGDILVFLTGQEEIETCNEILQ 134
H P G +LVFLTGQ EI ++ L+
Sbjct: 577 GHKKLPPGGMLVFLTGQNEITQLSKRLK 604
Score = 217 (81.4 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 50/108 (46%), Positives = 64/108 (59%)
Query: 122 GQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNI 181
G E E E + G+ + +LP+YS LPT Q ++F P P +R VVLATN+
Sbjct: 650 GSEGDENEEEEFKIEEEEAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNV 709
Query: 182 AETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
AETSLTI I YV D G K+ ++ TG++S V ISKASANQR G
Sbjct: 710 AETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREG 757
Score = 77 (32.2 bits), Expect = 3.6e-42, Sum P(3) = 3.6e-42
Identities = 15/61 (24%), Positives = 35/61 (57%)
Query: 974 DTARKNFFMLG--GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLV 1031
+ KNF L D + +L + ++A + +WC +F++ + +K A+ +R+Q++ L+
Sbjct: 924 NAVNKNFCFLDDKSDAIKMLQVLGEFAHEP-TEKWCESHFVRFKVLKEAQKLRQQIVQLL 982
Query: 1032 Q 1032
+
Sbjct: 983 K 983
Score = 69 (29.3 bits), Expect = 2.5e-41, Sum P(3) = 2.5e-41
Identities = 11/47 (23%), Positives = 30/47 (63%)
Query: 1153 DHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLIGLVQ 1199
D + +L + ++A + +WC +F++ + +K A+ +R+Q++ L++
Sbjct: 938 DAIKMLQVLGEFAHEP-TEKWCESHFVRFKVLKEAQKLRQQIVQLLK 983
Score = 47 (21.6 bits), Expect = 4.0e-21, Sum P(3) = 4.0e-21
Identities = 17/88 (19%), Positives = 39/88 (44%)
Query: 617 KDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQ 676
K E++E L N++D +L ++ G+ T++Q + E + LP ++
Sbjct: 78 KKEENRELLAKLAANKVD--TSL-FSSSKTLGQTRQTKRQALSQALNEERAGLPGNATRE 134
Query: 677 DLIDAVRDHQVLIIEGETGSGKTTQIPQ 704
+L+ R+ + + + E + P+
Sbjct: 135 ELLYEKREERNVSDQEEDSESEAQAQPK 162
Score = 39 (18.8 bits), Expect = 4.9e-40, Sum P(4) = 4.9e-40
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 324 KSSEYKVGNGEDSFCVSPLYNL 345
K E + G G V PLY+L
Sbjct: 662 KIEEEEAGTGPSRMHVLPLYSL 683
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 302 (111.4 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 88/311 (28%), Positives = 152/311 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + +++ +SKA+A Q
Sbjct: 545 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 600
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY L+D +PEI R L L +K L + + +F +
Sbjct: 601 GRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 659
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP +E ++L++ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 660 DPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 719
Query: 951 TIASMLSVNGAIFYRP--KDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADAD-----F 1002
TIA+ LS F P K+KI AD RK DHL ++N + W +A +
Sbjct: 720 TIAASLSFKDP-FVIPLGKEKI--ADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRY 776
Query: 1003 STQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEMELVSNPTETVN------IRKAI 1052
+C+E F+ +++ +++ E L+G V +P +N I+ I
Sbjct: 777 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSSRNPKDPESNINSDNEKIIKAVI 835
Query: 1053 TAGYFYHIAKL 1063
AG + +AK+
Sbjct: 836 CAGLYPKVAKI 846
Score = 261 (96.9 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 56/139 (40%), Positives = 93/139 (66%)
Query: 93 EADYIDA-CVVSILQ-IHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIIL 150
E D +D +V++++ I + G ILVFL G + I T +++L +V K + +I+
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDKFLII 522
Query: 151 PVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTG 210
P++S +PT QT++F TPP RK+V+ATNIAETS+TID+++YVID G K+ +F+++
Sbjct: 523 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 582
Query: 211 MESLTVVPISKASANQRAG 229
+ +++ +SKA+A QR G
Sbjct: 583 ISTMSAEWVSKANAKQRKG 601
Score = 218 (81.8 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 42/86 (48%), Positives = 62/86 (72%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+P L+S S +++DE HER L +D+L +VKD++ FRSDLK+++ SATL+
Sbjct: 311 TTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLN 370
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+F + P+ IPG FPV Y
Sbjct: 371 AEKFSEYFGNCPMIHIPGFTFPVVEY 396
Score = 188 (71.2 bits), Expect = 5.6e-38, Sum P(4) = 5.6e-38
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 629 LDNQIDFIQALSLP-GNRDKGEEEMTEKQKKKLN---IEETKKSLPIYPFKQDLIDAVRD 684
+D +++ + P G D+ E +K+K L ++ ++ LP Y +++L++ + +
Sbjct: 163 IDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDN 222
Query: 685 HQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEEMGV 741
HQV +I GETG GKTTQ+ Q++ + + K +I CTQP E
Sbjct: 223 HQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAE 282
Query: 742 KLGC--EVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
G GY IR + ++ I Y T G + + S+P L+S S +++DE H +
Sbjct: 283 SCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHER 339
Score = 67 (28.6 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 1039 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1091
+++ E + I+ I AG + +AK L+ K K + +T V +HP S E+
Sbjct: 823 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDF 881
Query: 1092 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1119
W++YH + T+ ++ TE+ LL
Sbjct: 882 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 911
Score = 67 (28.6 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 1206 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1258
+++ E + I+ I AG + +AK L+ K K + +T V +HP S E+
Sbjct: 823 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDF 881
Query: 1259 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1286
W++YH + T+ ++ TE+ LL
Sbjct: 882 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 911
Score = 67 (28.6 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 1153 DHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEM 1203
DHL ++N + W +A + +C+E F+ +++ +++ E L+G V
Sbjct: 755 DHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSS 813
Query: 1204 ELVSNPTETVN------IRKAITAGYFYHIAKL 1230
+P +N I+ I AG + +AK+
Sbjct: 814 RNPKDPESNINSDNEKIIKAVICAGLYPKVAKI 846
Score = 40 (19.1 bits), Expect = 5.6e-38, Sum P(4) = 5.6e-38
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 503 KLRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQE 539
KL I+ ++ +++K ++ D EYL E E
Sbjct: 139 KLDIQEKKLINQEKKMFRIRNRSYIDRDSEYLLQENE 175
Score = 40 (19.1 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E+I
Sbjct: 695 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI 740
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 263 (97.6 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 70/265 (26%), Positives = 134/265 (50%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
VID G ++ +NSR + LT +SKA+A Q C+ L++ + + +
Sbjct: 982 VIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFL 1041
Query: 858 DNTVPEIQRINLGNAVLMLKALGINDL--IHFDFLDPPPHETLVLALEQLYALGALNHHG 915
PEI R+NL VL +K + D+ + LDPP ++ ALE+L+ +GAL+ +
Sbjct: 1042 SYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENE 1101
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
LTKLG+ +++ P+D +GK+L+ YKCV+ +I +ML++ G+ F + D A+
Sbjct: 1102 KLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTI-GSPFRKSVDNEFSANK 1160
Query: 976 ARKNFFMLG--GDHLVLLNIYNQWADADFST------QWCYENFIQHRSMKRARDVREQL 1027
AR +F D +++ Y W + S + E ++ ++ ++ QL
Sbjct: 1161 ARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKEKYLNLEALSMTESLKIQL 1220
Query: 1028 IGLVQRVEMELVSNPTETVNIRKAI 1052
+ ++ +++ S+ +++++I
Sbjct: 1221 LSELKDMKLLGASDVDTCKSLKRSI 1245
Score = 182 (69.1 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 646 DKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY 705
+K +++ + +K + + LP F++ +IDAV + Q+LII G+TG GK+TQIP +
Sbjct: 610 NKWRQQLESESAEKFKV--FRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAF 667
Query: 706 LHEAGFTKDK-MKIGCTQPXXXXXXXXXXXXXEEMG-----VKLGCEVGYAIRFEDCTSE 759
L E K +KI T+P +E+G + VGY++R + +
Sbjct: 668 LLENSTKNGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTP 727
Query: 760 RTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
T + Y+T GT R ++ S + +IIDE H +
Sbjct: 728 LTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHER 763
Score = 178 (67.7 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 42/114 (36%), Positives = 65/114 (57%)
Query: 116 ILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKV 175
+LVFL G EI +++D + ++ I ++S L + Q +F P RK+
Sbjct: 906 VLVFLPGISEILRVKSLIEDMP--MFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKI 963
Query: 176 VLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
VL+TNIAET +TI ++ VID G ++ +NSR + LT +SKA+A QR+G
Sbjct: 964 VLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSG 1017
Score = 153 (58.9 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 32/88 (36%), Positives = 55/88 (62%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T GT R ++ S + +IIDE HER++ +D+L V +++ LK++I SATL
Sbjct: 734 VTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATL 793
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYY 88
+A+KF +F+ + + IPG+ +PV +Y
Sbjct: 794 NAEKFQLYFEGSNLITIPGKTYPVHRFY 821
Score = 42 (19.8 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 40/181 (22%), Positives = 69/181 (38%)
Query: 504 LRIESRRKYLEKRKEDKVAELEADILDDEYLFS--EQELTXXXXXXXXXXXXXXXXAK-E 560
LR++ K + +E L+ + + +YLFS E E+ K E
Sbjct: 310 LRLQIANK--KNSEEFSTLNLQLESITSQYLFSSKEAEIVFRKSRIEFMNKLKALQQKLE 367
Query: 561 HDK-ARELEK--VQRYYMPKGTKGPXXXXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGAK 617
+++ E++K +Q PH + D+ + +G
Sbjct: 368 NERIVEEIKKNGIQEDSQSTDDSSKDDDNNSESNDMSPHNDAETRADDDA----YLMG-- 421
Query: 618 DREHQEQYELLLDNQIDFIQA--LSLPGNRDK-GEEEMTEKQKK--KL--NIEETKKSLP 670
D +QE+ E + D + D + A LP DK G T Q + K+ NI+ K++P
Sbjct: 422 DLFNQEE-EDIQDTENDLLNANYTLLPLTTDKSGTRPSTTLQYELHKIGSNIKAEFKTMP 480
Query: 671 I 671
I
Sbjct: 481 I 481
Score = 40 (19.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 105 LQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKE 146
L+I L D+ L G +++TC + + RR KE
Sbjct: 1216 LKIQLLSELKDMK--LLGASDVDTCKSLKRSICRRFAVIPKE 1255
Score = 38 (18.4 bits), Expect = 4.5e-30, Sum P(3) = 4.5e-30
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 49 SDLKLLISSATLDAQKFS 66
SDLK ++ +ATL A S
Sbjct: 502 SDLKTVLPTATLAADYIS 519
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 307 (113.1 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 87/309 (28%), Positives = 150/309 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + +++ +SKA+A Q
Sbjct: 547 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 602
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY + L+D +PEI R L L +K L + + HF +
Sbjct: 603 GRAGRVQPGHCYHLYNSLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLM 661
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP +E ++L+++ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 662 DPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 721
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADAD-----FST 1004
TIA+ LS F P K AD RK DHL ++N + W A +
Sbjct: 722 TIAASLSFKDP-FVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEK 780
Query: 1005 QWCYENFIQHRSMKRARDVR----EQLIGLVQRVEMELVSNPTETVN------IRKAITA 1054
+C+E F+ +++ +++ E L+G V +P +N I+ I A
Sbjct: 781 DYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSSRNPQDPESNINSDNEKIIKAVICA 839
Query: 1055 GYFYHIAKL 1063
G + +AK+
Sbjct: 840 GLYPKVAKI 848
Score = 258 (95.9 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 52/116 (44%), Positives = 81/116 (69%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G ILVFL G + I T +++L +V K + II+P++S +PT QT++F TPP R
Sbjct: 491 GAILVFLPGWDNISTLHDLLMSQVM---FKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVR 547
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
K+V+ATNIAETS+TID+++YVID G K+ +F+++ + +++ +SKA+A QR G
Sbjct: 548 KIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 603
Score = 210 (79.0 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 40/86 (46%), Positives = 61/86 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+P L+S S +++DE HER L +D+L +VKD++ +R DLK+++ SATL+
Sbjct: 313 TTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLN 372
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+F + P+ IPG FPV Y
Sbjct: 373 AEKFSEYFGNCPMIHIPGFTFPVVEY 398
Score = 191 (72.3 bits), Expect = 1.5e-39, Sum P(3) = 1.5e-39
Identities = 55/206 (26%), Positives = 98/206 (47%)
Query: 596 HYEQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEK 655
H E++ E+ FR+ K + +Y LL +N+ D L + K + ++
Sbjct: 145 HQEKKMINQEKRP---FRIRDKYIDRDSEY-LLQENEPDATLDQQLLEDLQKKKTDL--- 197
Query: 656 QKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK 715
+ + ++ ++ LP Y +++L++ + +HQV +I GETG GKTTQ+ Q++ + + K
Sbjct: 198 --RYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGK 255
Query: 716 ---MKIGCTQPXXXXXXXXXXXXXEEMGVKLGC--EVGYAIRFED-CTSERTIIKYMTDG 769
+I CTQP E G GY IR + ++ I Y T G
Sbjct: 256 GSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTG 315
Query: 770 TLHREFLSEPDLASYSVMIIDEAHPK 795
+ + S+P L+S S +++DE H +
Sbjct: 316 IILQWLQSDPHLSSVSHIVLDEIHER 341
Score = 68 (29.0 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 1039 VSNPTETVNIRKAITAGYFYHIAKL-----SKSGSYKT-AKHNQTVMIHPNSSLFEELP- 1091
+++ E + I+ I AG + +AK+ K K K + V IHP S E+
Sbjct: 825 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEF 883
Query: 1092 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1119
W++YH + T+ ++ TE+ LL
Sbjct: 884 NYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 913
Score = 68 (29.0 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 1206 VSNPTETVNIRKAITAGYFYHIAKL-----SKSGSYKT-AKHNQTVMIHPNSSLFEELP- 1258
+++ E + I+ I AG + +AK+ K K K + V IHP S E+
Sbjct: 825 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEF 883
Query: 1259 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1286
W++YH + T+ ++ TE+ LL
Sbjct: 884 NYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 913
Score = 65 (27.9 bits), Expect = 7.3e-36, Sum P(3) = 7.3e-36
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 1153 DHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEM 1203
DHL ++N + W A + +C+E F+ +++ +++ E L+G V
Sbjct: 757 DHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSS 815
Query: 1204 ELVSNPTETVN------IRKAITAGYFYHIAKL 1230
+P +N I+ I AG + +AK+
Sbjct: 816 RNPQDPESNINSDNEKIIKAVICAGLYPKVAKI 848
Score = 39 (18.8 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E++
Sbjct: 697 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKV 742
Score = 38 (18.4 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 509 RRKYLEKRKEDKVAELEADILDDEYLFSE 537
R KY+++ E + E E D D+ L +
Sbjct: 161 RDKYIDRDSEYLLQENEPDATLDQQLLED 189
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 298 (110.0 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 88/311 (28%), Positives = 151/311 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + +++ +SKA+A Q
Sbjct: 525 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 580
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY L+D +PEI R L L +K L + + +F +
Sbjct: 581 GRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 639
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP E + L+++ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 640 DPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 699
Query: 951 TIASMLSVNGAIFYRP--KDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADAD-----F 1002
TIA+ LS F P K+KI AD RK DHL ++N + W +A +
Sbjct: 700 TIAASLSFKDP-FVIPLGKEKI--ADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRY 756
Query: 1003 STQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEMELVSNPTETVN------IRKAI 1052
+C+E F+ +++ +++ E L+G V +P +N I+ I
Sbjct: 757 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSSRNPKDPKSNINSDNEKIIKAVI 815
Query: 1053 TAGYFYHIAKL 1063
AG + +AK+
Sbjct: 816 CAGLYPKVAKI 826
Score = 206 (77.6 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+ L+S S +++DE HER L +D+L ++KD++ FR DLK+++ SATL+
Sbjct: 305 TTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLN 364
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+F + P+ IPG FPV Y
Sbjct: 365 AEKFSEYFGNCPMIHIPGFTFPVVEY 390
Score = 181 (68.8 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 51/190 (26%), Positives = 91/190 (47%)
Query: 612 FRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPI 671
FR+ K + +Y LL +N+ D L + K + ++ + + ++ ++ LP
Sbjct: 150 FRIRDKYIDRDSEY-LLQENEPDVALDQQLLEDLRKKKSDL-----RYIEMQHFREKLPS 203
Query: 672 YPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXXXXX 728
Y +++L++ + +HQV +I GETG GKTTQ+ Q++ + + K +I CTQP
Sbjct: 204 YGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISA 263
Query: 729 XXXXXXXXEEMGVKLGC--EVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYS 785
E G GY IR + ++ I Y T G + + S+ L+S S
Sbjct: 264 ISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVS 323
Query: 786 VMIIDEAHPK 795
+++DE H +
Sbjct: 324 HIVLDEIHER 333
Score = 181 (68.8 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 36/88 (40%), Positives = 60/88 (68%)
Query: 142 SKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCK 201
S + +L++ V +D ++F TPP RK+V+ATNIAETS+TID+++YVID G K
Sbjct: 496 STLHDLLMSQVM--FKSDTIGQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 553
Query: 202 QNNFNSRTGMESLTVVPISKASANQRAG 229
+ +F+++ + +++ +SKA+A QR G
Sbjct: 554 ETHFDTQNNISTMSAEWVSKANAKQRKG 581
Score = 69 (29.3 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 596 HYEQRKWEDEQMSSAIFRVGAK-DREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTE 654
H ++R+ +EQ+ + V AK D++ + Q D +P E+ E
Sbjct: 81 HMDERR--EEQIVQLLHSVQAKNDKDSEAQISWFAPE--DHGYGTEIPAENKPNSEKKLE 136
Query: 655 KQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGE 693
Q+KKL I + K++ I + ID RD + L+ E E
Sbjct: 137 NQEKKL-ISQEKRTFRI---RDKYID--RDSEYLLQENE 169
Score = 68 (29.0 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 1039 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1091
+++ E + I+ I AG + +AK L+ K K + +T V IHP S E+
Sbjct: 803 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEF 861
Query: 1092 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1119
W++YH + T+ ++ TE+ LL
Sbjct: 862 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 891
Score = 68 (29.0 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 1206 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1258
+++ E + I+ I AG + +AK L+ K K + +T V IHP S E+
Sbjct: 803 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEF 861
Query: 1259 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1286
W++YH + T+ ++ TE+ LL
Sbjct: 862 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 891
Score = 67 (28.6 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 1153 DHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEM 1203
DHL ++N + W +A + +C+E F+ +++ +++ E L+G V
Sbjct: 735 DHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSS 793
Query: 1204 ELVSNPTETVN------IRKAITAGYFYHIAKL 1230
+P +N I+ I AG + +AK+
Sbjct: 794 RNPKDPKSNINSDNEKIIKAVICAGLYPKVAKI 826
Score = 57 (25.1 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 95 DYIDACVVSILQIHAT--QPLGDILVFLTGQEEIETCNEILQDRV 137
D +D +++ L H + G ILVFL G + I T +++L +V
Sbjct: 462 DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 506
Score = 42 (19.8 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 509 RRKYLEKRKEDKVAELEADILDDEYLFSE 537
R KY+++ E + E E D+ D+ L +
Sbjct: 153 RDKYIDRDSEYLLQENEPDVALDQQLLED 181
Score = 40 (19.1 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E+I
Sbjct: 675 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI 720
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 240 (89.5 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 69/269 (25%), Positives = 126/269 (46%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
VID G K F+ R + L IS+A+A Q CF ++T + + L
Sbjct: 996 VIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHRHDNLLA 1055
Query: 858 DNTVPEIQRINLGNAVLMLKA--LGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHG 915
+ PE+ R++L + VL +K LG + + LDPP + + A++ L + AL
Sbjct: 1056 EQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSKNIRRAIDALKEVKALTSTE 1115
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADT 975
+LT LG+++A+ PLD +GK+++ +KC++ ++IA++LS F +
Sbjct: 1116 NLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILSCKSP-FVNTMGSNAQKEA 1174
Query: 976 ARKNFFMLGGDHLVLLNIYNQWADADFST-----QWCYENFIQHRSMKRARDVREQL-IG 1029
R F D L + N Y W + +C +NF+ +++ DV+ QL +
Sbjct: 1175 VRLGFRRGDSDLLTVYNAYCAWKRTRSTPGANEYAFCRKNFLSPQTLLNIEDVKLQLMVS 1234
Query: 1030 LVQRVEMELVSNPTETVNIRKAITAGYFY 1058
+ + L +N ++N ++ +F+
Sbjct: 1235 IADAGLVTLDTNQKASLNRARSTRQRHFF 1263
Score = 178 (67.7 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 48/115 (41%), Positives = 65/115 (56%)
Query: 116 ILVFLTGQEEIETCN-EILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
ILVFL G EI N E+L + + G II ++S++ +D Q K F+ P RK
Sbjct: 922 ILVFLPGMAEIRRLNDELLSEPTFQHG-----WIIHALHSSIASDEQEKAFVVPPDGMRK 976
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
+V+ATNIAET +TI +I VID G K F+ R + L IS+A+A QR G
Sbjct: 977 IVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRG 1031
Score = 176 (67.0 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 46/148 (31%), Positives = 74/148 (50%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK-MKIGCTQ 722
+++ LPI+ FK ++++ + H+ LII ETGSGK+TQIP ++ E + KI T+
Sbjct: 640 QSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKIYVTE 699
Query: 723 PXXXXXXXXXXXXXEEMGVK---LGCE---VGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
P EE+G +G +G+A+R E S T + + T G + R L
Sbjct: 700 PRRISAISLARRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVR-ML 758
Query: 777 SEPD-LASYSVMIIDEAHPKVYVIDPGF 803
PD + +++DE H + ID F
Sbjct: 759 ERPDDFQDITHVVLDEVHERS--IDSDF 784
Score = 169 (64.5 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 34/85 (40%), Positives = 54/85 (63%)
Query: 2 TDGTLHREFLSEPD-LASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
T G + R L PD + +++DE HER++ +D L +++ +++ R DLKL++ SAT+
Sbjct: 750 TTGVVVR-MLERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATV 808
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVD 85
DA +FS + PV IPGR FPV+
Sbjct: 809 DANRFSTYLGGVPVLNIPGRTFPVE 833
Score = 54 (24.1 bits), Expect = 2.6e-41, Sum P(4) = 2.6e-41
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 1180 QHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGS-YKT 1238
Q S+ RAR R++ +N +T+ I+ I ++ + L++ G ++
Sbjct: 1247 QKASLNRARSTRQR--HFFTTPPSHDTNNANDTL-IQSVIAWSFYPKL--LTREGKGWRN 1301
Query: 1239 AKHNQTVMIHPNS 1251
+NQ+V +HP S
Sbjct: 1302 IANNQSVTLHPTS 1314
Score = 54 (24.1 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 1013 QHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGS-YKT 1071
Q S+ RAR R++ +N +T+ I+ I ++ + L++ G ++
Sbjct: 1247 QKASLNRARSTRQR--HFFTTPPSHDTNNANDTL-IQSVIAWSFYPKL--LTREGKGWRN 1301
Query: 1072 AKHNQTVMIHPNS 1084
+NQ+V +HP S
Sbjct: 1302 IANNQSVTLHPTS 1314
Score = 52 (23.4 bits), Expect = 4.2e-21, Sum P(3) = 4.2e-21
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 1134 STNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFST-----QWCYENFIQHRSMKRAR 1188
S +K LG R + D L + N Y W + +C +NF+ +++
Sbjct: 1168 SNAQKEAVRLGFRRGD--SDLLTVYNAYCAWKRTRSTPGANEYAFCRKNFLSPQTLLNIE 1225
Query: 1189 DVREQL-IGLVQRVEMELVSNPTETVNIRKAITAGYFY 1225
DV+ QL + + + L +N ++N ++ +F+
Sbjct: 1226 DVKLQLMVSIADAGLVTLDTNQKASLNRARSTRQRHFF 1263
Score = 44 (20.5 bits), Expect = 1.6e-27, Sum P(4) = 1.6e-27
Identities = 27/124 (21%), Positives = 42/124 (33%)
Query: 501 IPKLRIESRRKYLEKRKE---DKVAELEADILDDEYL----FSEQELTXXXXXXXXXXXX 553
IP K+LE E + E E+++ DDEY S+ E T
Sbjct: 825 IPGRTFPVETKFLEDAIELTQYRTTENESNVADDEYEDDAETSQGETTGVAATLENYSKQ 884
Query: 554 XXXXAKEHDKAR-ELEKVQRYYMPKGTKGPXXXXXXXXXXXXPHY-EQRKWEDEQMSSAI 611
D+ R + + +++ M T P E R+ DE +S
Sbjct: 885 TRETIMNFDEYRLDYQLIKKLLMKLATAPEMEYYSKAILVFLPGMAEIRRLNDELLSEPT 944
Query: 612 FRVG 615
F+ G
Sbjct: 945 FQHG 948
Score = 38 (18.4 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 1195 IGLVQRVEMELVSNPTETVNIRKAITA 1221
+G V+ +E + +P + NIR+AI A
Sbjct: 1079 LGEVEPTLLEAL-DPPSSKNIRRAIDA 1104
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 327 (120.2 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 102/379 (26%), Positives = 180/379 (47%)
Query: 759 ERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESL 818
+R I + G R+ + ++A S+ I D A +VID G K+ ++++ L
Sbjct: 544 QRLIFEEPASGV--RKIVLATNIAETSITINDVA----FVIDCGKAKETSYDALNNTPCL 597
Query: 819 TVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKA 878
ISK SA Q +C+ LY Y + +PEI R L + L +K+
Sbjct: 598 LPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYD-AFAEYQLPEILRTPLHSLCLQIKS 656
Query: 879 LGINDLIHF--DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKM 936
L + + F L P + A+ L +GAL+ + DLT LGR +++ P++P +GKM
Sbjct: 657 LNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKM 716
Query: 937 LLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQ 996
L+ C++ I+T+A+ LSV F P+DK A+ A+ F DHL L+ Y
Sbjct: 717 LILGAILGCLDPILTVAAGLSVRDP-FLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEG 775
Query: 997 WADADFST---QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPT------ETVN 1047
W A+ + +C++NF+ +S++ +R++ L++ + + NP+ N
Sbjct: 776 WKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGL-IDGNPSICNSEGNDAN 834
Query: 1048 IRKAITA-GYFYHIAKL---SKSGSYKTAKHNQTVMIHPNSSLFEE--LPR-WVLYHELV 1100
+ +A+ G + I + +S S KT + Q V+++ NS E +P W++++E +
Sbjct: 835 LTRAVICYGMYPGICSVVHNERSFSLKTMEDGQ-VLLYSNSENARETKIPYPWLVFNEKI 893
Query: 1101 FTTKEFMRQVTEIESKWLL 1119
F+R T L+
Sbjct: 894 KVNSVFLRDSTACSDSTLI 912
Score = 206 (77.6 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 45/135 (33%), Positives = 71/135 (52%)
Query: 664 ETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGC 720
+++ SLP + + ++ A+ +QV++I GETG GKTTQIPQ++ E+ ++ I C
Sbjct: 215 DSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIIC 274
Query: 721 TQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
TQP E G +LG VGY +R E T + + T G L R L + +
Sbjct: 275 TQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRN 334
Query: 781 LASYSVMIIDEAHPK 795
L + +I+DE H +
Sbjct: 335 LRGVTHVIVDEIHER 349
Score = 181 (68.8 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 52/152 (34%), Positives = 78/152 (51%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G IL+FLTG ++I + E LQ + + +++L + ++ T Q IF R
Sbjct: 499 GGILIFLTGWDDISSLKEKLQ--IHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVR 556
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITG 233
K+VLATNIAETS+TI+++ +VID G K+ ++++ L ISK SA QR G
Sbjct: 557 KIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGR 616
Query: 234 FNPLSDFRGCAHVLGEEVLRGCAHVLGEEVLR 265
P C H+ + V A E+LR
Sbjct: 617 VRPGQ----CYHLYPKCVYDAFAEYQLPEILR 644
Score = 176 (67.0 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R L + +L + +I+DE HER ++ D L ++KD++ RS+LKL++ SATLD
Sbjct: 321 TTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLD 380
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A+ FS +F A V IPG +PV ++
Sbjct: 381 AELFSSYFGGAGVIYIPGFTYPVRSHF 407
Score = 108 (43.1 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 35/150 (23%), Positives = 71/150 (47%)
Query: 1153 DHLVLLNIYNQWADADFST---QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP 1209
DHL L+ Y W A+ + +C++NF+ +S++ +R++ L++ + + NP
Sbjct: 765 DHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGL-IDGNP 823
Query: 1210 T------ETVNIRKAITA-GYFYHIAKL---SKSGSYKTAKHNQTVMIHPNSSLFEE--L 1257
+ N+ +A+ G + I + +S S KT + Q V+++ NS E +
Sbjct: 824 SICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQ-VLLYSNSENARETKI 882
Query: 1258 PR-WVLYHELVFTTKEFMRQVTEIESKWLL 1286
P W++++E + F+R T L+
Sbjct: 883 PYPWLVFNEKIKVNSVFLRDSTACSDSTLI 912
Score = 40 (19.1 bits), Expect = 9.6e-23, Sum P(3) = 9.6e-23
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 290 YLVGFIWHWKNHYIQDQTLVT-FMLT 314
Y+ GF + ++H+++D +T + LT
Sbjct: 395 YIPGFTYPVRSHFLEDILEMTRYRLT 420
Score = 38 (18.4 bits), Expect = 9.6e-23, Sum P(3) = 9.6e-23
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 246 VLGEEVLRGCAHVLGEEVLRPEVSQPF 272
+L + LRG HV+ +E+ +++ F
Sbjct: 329 LLVDRNLRGVTHVIVDEIHERGMNEDF 355
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 298 (110.0 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 88/315 (27%), Positives = 153/315 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D V+VID G K+ +F+++ + ++ +SKA+A Q
Sbjct: 526 RKIVIATNIAETSITIDDV----VFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRK 581
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY L+D +PEI R L L +K L + + +F +
Sbjct: 582 GRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLM 640
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP + ++LA+ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 641 DPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 700
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADA---DFSTQ- 1005
TIA+ LS F P K AD RK DHL ++N + W + F T+
Sbjct: 701 TIAASLSFKDP-FVIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEK 759
Query: 1006 -WCYENFIQHRSMKRARDVR----EQLI--GLVQRVEMELVSNPTETVN---IRKAITAG 1055
+C+E F+ +++ +++ E L+ G V + + + T + N ++ I AG
Sbjct: 760 DYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAG 819
Query: 1056 YFYHIAKLSKSGSYK 1070
+ +AK+ S S K
Sbjct: 820 LYPKVAKIRPSFSKK 834
Score = 257 (95.5 bits), Expect = 9.6e-37, Sum P(3) = 9.6e-37
Identities = 55/137 (40%), Positives = 88/137 (64%)
Query: 95 DYIDACVVSILQIHAT--QPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPV 152
D +D +++ L H + G ILVFL G + I T +++L +V K II+P+
Sbjct: 449 DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFIIIPL 505
Query: 153 YSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGME 212
+S +PT QT++F TPP RK+V+ATNIAETS+TID++++VID G K+ +F+++ +
Sbjct: 506 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNIS 565
Query: 213 SLTVVPISKASANQRAG 229
++ +SKA+A QR G
Sbjct: 566 TMAAEWVSKANAKQRKG 582
Score = 207 (77.9 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+ L+S S +++DE HER L +D+L ++KD++ R DLK+++ SATL+
Sbjct: 292 TTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLN 351
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+FD+ P+ IPG FPV Y
Sbjct: 352 AEKFSEYFDNCPMIHIPGFTFPVVEY 377
Score = 165 (63.1 bits), Expect = 7.7e-37, Sum P(3) = 7.7e-37
Identities = 48/180 (26%), Positives = 87/180 (48%)
Query: 629 LDNQIDFIQALSLPGNRDKGEEEMTEKQKKK-----LNIEETKKSLPIYPF--KQDLIDA 681
LD ++++ + + D E+ + +KKK + ++ ++ LP Y KQ+L++
Sbjct: 142 LDQDVEYLFEKN-DQDADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQKQELVNL 200
Query: 682 VRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEE 738
+ +++V +I GETG GKTTQ+ Q++ + + K +I CTQP E
Sbjct: 201 INNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAAE 260
Query: 739 MGVKLGC--EVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
G GY IR + ++ I Y T G + + S+ L+S S +++DE H +
Sbjct: 261 RAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHER 320
Score = 77 (32.2 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 1048 IRKAITAGYFYHIAKLSKSGSYKT------AKHNQTVMIHPNSSLFEELP---RWVLYHE 1098
++ I AG + +AK+ S S K K + TV IHP S EE W++YH
Sbjct: 812 LKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHL 871
Query: 1099 LVFTTKEFMRQVTEIESKWLL 1119
+ T+ ++ TE+ LL
Sbjct: 872 KMRTSSIYLYDCTEVSPYCLL 892
Score = 77 (32.2 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 1215 IRKAITAGYFYHIAKLSKSGSYKT------AKHNQTVMIHPNSSLFEELP---RWVLYHE 1265
++ I AG + +AK+ S S K K + TV IHP S EE W++YH
Sbjct: 812 LKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHL 871
Query: 1266 LVFTTKEFMRQVTEIESKWLL 1286
+ T+ ++ TE+ LL
Sbjct: 872 KMRTSSIYLYDCTEVSPYCLL 892
Score = 68 (29.0 bits), Expect = 8.3e-36, Sum P(3) = 8.3e-36
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 1153 DHLVLLNIYNQWADA---DFSTQ--WCYENFIQHRSMKRARDVR----EQLI--GLVQRV 1201
DHL ++N + W + F T+ +C+E F+ +++ +++ E L+ G V
Sbjct: 736 DHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSR 795
Query: 1202 EMELVSNPTETVN---IRKAITAGYFYHIAKLSKSGSYK 1237
+ + + T + N ++ I AG + +AK+ S S K
Sbjct: 796 DPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKK 834
Score = 39 (18.8 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E++
Sbjct: 676 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKV 721
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 337 (123.7 bits), Expect = 3.8e-41, Sum P(2) = 3.8e-41
Identities = 87/286 (30%), Positives = 150/286 (52%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A SV I D+ V+V+D G K+ F+S MESL +V +S+A+A Q
Sbjct: 811 RKIVLSTNIAETSVTI-DDC---VFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRK 866
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI----NDL-IHF 887
C LYT++ Y++ + VPEIQR+ L VL +K L N L +
Sbjct: 867 GRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLL 926
Query: 888 DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVE 947
+ L+ P ++++ AL +L +GAL+ LT LG +A P+D +GK++L ++C++
Sbjct: 927 ETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLD 986
Query: 948 EIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADA----DF- 1002
++TIA+ LS N + F P +K AD ++ F + DHL +LN Y +W D ++
Sbjct: 987 SVLTIAACLS-NKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYA 1045
Query: 1003 -STQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVN 1047
S + E+F+ +++ D++ Q + L+ + + P N
Sbjct: 1046 ASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKN 1091
Score = 246 (91.7 bits), Expect = 4.4e-33, Sum P(3) = 4.4e-33
Identities = 64/174 (36%), Positives = 99/174 (56%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G IL+FL G EI++ ++ L D + + I++P++S L + Q +F PP R
Sbjct: 753 GTILIFLPGFGEIQSVHDSLLDNAL-FSPRAGKFILVPLHSALSGEDQALVFKKAPPGKR 811
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG---- 229
K+VL+TNIAETS+TID+ ++V+D G K+ F+S MESL +V +S+A+A QR G
Sbjct: 812 KIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGR 871
Query: 230 VITG--FNPLSDFRGCAHVLGEEVLRGCAHVLGEEVLRPEVSQPFRSFGYLGVM 281
V+ G + + +R H+L + V L + VLR + Q F S L V+
Sbjct: 872 VMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVL 925
Score = 197 (74.4 bits), Expect = 3.8e-41, Sum P(2) = 3.8e-41
Identities = 40/83 (48%), Positives = 57/83 (68%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R S+P L S + +I+DE HER+ +D L ++K+++R R DLK+++ SATL+
Sbjct: 561 TTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLN 620
Query: 62 AQKFSEFFDDAPVFRIPGRRFPV 84
A FS++F APV IPGR FPV
Sbjct: 621 AALFSDYFGGAPVLDIPGRTFPV 643
Score = 186 (70.5 bits), Expect = 5.5e-40, Sum P(2) = 5.5e-40
Identities = 46/151 (30%), Positives = 77/151 (50%)
Query: 655 KQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF--- 711
K+++ I + +K LP + + ++ + V++I GETG GK+TQ+PQ++ + F
Sbjct: 439 KEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 498
Query: 712 ----TKDKM---KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIK 764
K+ + +I CTQP E ++G VGY IR E+ S+ T +
Sbjct: 499 LQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLS 558
Query: 765 YMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
+ T G L R S+P L S + +I+DE H +
Sbjct: 559 FCTTGILLRRLASDPLLGSVTHVIVDEVHER 589
Score = 68 (29.0 bits), Expect = 4.4e-33, Sum P(3) = 4.4e-33
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 1136 NKKMPKTLGKSRAELGG-DHLVLLNIYNQWADA----DF--STQWCYENFIQHRSMKRAR 1188
NK+ K LG DHL +LN Y +W D ++ S + E+F+ +++
Sbjct: 1006 NKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIA 1065
Query: 1189 DVREQLIGLVQRVEMELVSNPTETVN 1214
D++ Q + L+ + + P N
Sbjct: 1066 DLKYQYLELLVSIGFVPIDVPRRRKN 1091
Score = 41 (19.5 bits), Expect = 8.6e-25, Sum P(2) = 8.6e-25
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 626 ELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLN 661
+ +LDN F +AL LP + E+ Q ++L+
Sbjct: 488 QFILDNW--FFRALQLPAKENLPHVEIICTQPRRLS 521
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 325 (119.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 84/265 (31%), Positives = 132/265 (49%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A SV I D VYVID G K+ +++ MESL V +S+A+A Q
Sbjct: 957 NIAETSVTIDDV----VYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVA 1012
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGIN-----DLIHFDFLDPPP 894
CF L+T+ ++H L +PEIQR+ L L +K L + D + ++PP
Sbjct: 1013 SGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPT 1072
Query: 895 HETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
+L A ++L ALGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 1073 EGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAA 1132
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADA---DFST--QWCYE 1009
L+ F P DK A+ + F + DHL L+ Y W +A F Q+C E
Sbjct: 1133 SLAFKSP-FVSPWDKREEANEKKLAFSLANSDHLALMQAYKGWCNAAQSGFKAGYQYCRE 1191
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRV 1034
NF+ R ++ ++ Q L+ +
Sbjct: 1192 NFLSIRGLQEIACLKRQFAELLSDI 1216
Score = 216 (81.1 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 60/185 (32%), Positives = 100/185 (54%)
Query: 95 DYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYS 154
D +++ + I+ + P G +LVFL G EI+ E LQ + ++ P++S
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHS 931
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
+L + Q +F K++++TNIAETS+TID+++YVID G K+ +++ MESL
Sbjct: 932 SLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESL 991
Query: 215 TVVPISKASANQRAG----VITG--FNPLSDFRGCAHVLGEEVLRGCAHVLGEEV-LRPE 267
V +S+A+A QR G V +G F+ + R H L ++ L V E++ LR +
Sbjct: 992 EDVWVSRANALQRKGRAGRVASGVCFHLFTSHR-FEHHLSQQQLPEIQRVPLEQLCLRVK 1050
Query: 268 VSQPF 272
V + F
Sbjct: 1051 VLEVF 1055
Score = 204 (76.9 bits), Expect = 9.0e-40, Sum P(4) = 9.0e-40
Identities = 46/152 (30%), Positives = 80/152 (52%)
Query: 649 EEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE 708
E + ++ ++++E ++ LP + ++ +++ + +QVL+I G TG GKTTQIPQ++ +
Sbjct: 562 EFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILD 621
Query: 709 AGFTK----DKM-KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTII 763
F + D++ I CTQP +E LG GY IR E S T +
Sbjct: 622 -NFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRL 680
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
+ T G L R +P+L+ + +I+DE H +
Sbjct: 681 MFCTTGVLLRRLEGDPELSGVTHVIVDEVHER 712
Score = 202 (76.2 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 37/87 (42%), Positives = 61/87 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R +P+L+ + +I+DE HERT +D L ++KD++ R+DLK+++ SATL+
Sbjct: 684 TTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLN 743
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A+ FS++F++ P IPGR FPV+ ++
Sbjct: 744 AELFSQYFNNCPCIHIPGRTFPVEQFF 770
Score = 75 (31.5 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADA---DFST--QWCYENFIQHRSMKR 1186
E++ KK+ +L S DHL L+ Y W +A F Q+C ENF+ R ++
Sbjct: 1148 EEANEKKLAFSLANS------DHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQE 1201
Query: 1187 ARDVREQLIGLVQRV 1201
++ Q L+ +
Sbjct: 1202 IACLKRQFAELLSDI 1216
Score = 55 (24.4 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 1240 KHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1280
K + V IHP+S F + P +++YHE V T++ F+R + +
Sbjct: 1301 KSDGAVHIHPSSVNFSVRHYDSP-YLVYHEKVKTSRVFIRDCSMV 1344
Score = 55 (24.4 bits), Expect = 9.0e-40, Sum P(4) = 9.0e-40
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 1073 KHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1113
K + V IHP+S F + P +++YHE V T++ F+R + +
Sbjct: 1301 KSDGAVHIHPSSVNFSVRHYDSP-YLVYHEKVKTSRVFIRDCSMV 1344
Score = 38 (18.4 bits), Expect = 9.0e-40, Sum P(4) = 9.0e-40
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 56 SSATLDAQKFSE--FFD-DAPVFRIPGRRFPVDIYYTKAP 92
SS + D K S+ F + DAP++++ R P +Y + P
Sbjct: 349 SSTSRDLCKASQPGFSNADAPIYQLEIRFQPGSLYPFQPP 388
Score = 38 (18.4 bits), Expect = 9.0e-40, Sum P(4) = 9.0e-40
Identities = 16/68 (23%), Positives = 31/68 (45%)
Query: 598 EQR-KWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQ 656
E+R ++ EQ+ + ++ + ELL + Q Q + + + GEEE E+
Sbjct: 96 EKRSRFRSEQVPLPLQKIHMTSENKLQVKELLRELQNQEYQTPNSGSDYEGGEEEEDEEY 155
Query: 657 KKKLNIEE 664
+ + EE
Sbjct: 156 DELDHREE 163
Score = 37 (18.1 bits), Expect = 9.8e-28, Sum P(4) = 9.8e-28
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 701 QIPQYLHEAGFTKDKMK 717
Q + L + GF KD +K
Sbjct: 1208 QFAELLSDIGFVKDGLK 1224
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 302 (111.4 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 88/311 (28%), Positives = 152/311 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + +++ +SKA+A Q
Sbjct: 459 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 514
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY L+D +PEI R L L +K L + + +F +
Sbjct: 515 GRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 573
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP +E ++L++ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 574 DPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 633
Query: 951 TIASMLSVNGAIFYRP--KDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADAD-----F 1002
TIA+ LS F P K+KI AD RK DHL ++N + W +A +
Sbjct: 634 TIAASLSFKDP-FVIPLGKEKI--ADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRY 690
Query: 1003 STQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEMELVSNPTETVN------IRKAI 1052
+C+E F+ +++ +++ E L+G V +P +N I+ I
Sbjct: 691 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSSRNPKDPESNINSDNEKIIKAVI 749
Query: 1053 TAGYFYHIAKL 1063
AG + +AK+
Sbjct: 750 CAGLYPKVAKI 760
Score = 261 (96.9 bits), Expect = 9.9e-38, Sum P(3) = 9.9e-38
Identities = 56/139 (40%), Positives = 93/139 (66%)
Query: 93 EADYIDA-CVVSILQ-IHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIIL 150
E D +D +V++++ I + G ILVFL G + I T +++L +V K + +I+
Sbjct: 380 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDKFLII 436
Query: 151 PVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTG 210
P++S +PT QT++F TPP RK+V+ATNIAETS+TID+++YVID G K+ +F+++
Sbjct: 437 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 496
Query: 211 MESLTVVPISKASANQRAG 229
+ +++ +SKA+A QR G
Sbjct: 497 ISTMSAEWVSKANAKQRKG 515
Score = 218 (81.8 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 42/86 (48%), Positives = 62/86 (72%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+P L+S S +++DE HER L +D+L +VKD++ FRSDLK+++ SATL+
Sbjct: 225 TTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLN 284
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+F + P+ IPG FPV Y
Sbjct: 285 AEKFSEYFGNCPMIHIPGFTFPVVEY 310
Score = 188 (71.2 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 629 LDNQIDFIQALSLP-GNRDKGEEEMTEKQKKKLN---IEETKKSLPIYPFKQDLIDAVRD 684
+D +++ + P G D+ E +K+K L ++ ++ LP Y +++L++ + +
Sbjct: 77 IDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDN 136
Query: 685 HQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEEMGV 741
HQV +I GETG GKTTQ+ Q++ + + K +I CTQP E
Sbjct: 137 HQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAE 196
Query: 742 KLGC--EVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
G GY IR + ++ I Y T G + + S+P L+S S +++DE H +
Sbjct: 197 SCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHER 253
Score = 67 (28.6 bits), Expect = 9.9e-38, Sum P(3) = 9.9e-38
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 1153 DHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEM 1203
DHL ++N + W +A + +C+E F+ +++ +++ E L+G V
Sbjct: 669 DHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSS 727
Query: 1204 ELVSNPTETVN------IRKAITAGYFYHIAKL 1230
+P +N I+ I AG + +AK+
Sbjct: 728 RNPKDPESNINSDNEKIIKAVICAGLYPKVAKI 760
Score = 40 (19.1 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 503 KLRIESRRKYLEKRKEDKVAELEADILDDEYLFSEQE 539
KL I+ ++ +++K ++ D EYL E E
Sbjct: 53 KLDIQEKKLINQEKKMFRIRNRSYIDRDSEYLLQENE 89
Score = 40 (19.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E+I
Sbjct: 609 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI 654
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 310 (114.2 bits), Expect = 6.1e-40, Sum P(2) = 6.1e-40
Identities = 93/332 (28%), Positives = 160/332 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + +++ +SKA+A Q
Sbjct: 538 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 593
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY L+D +PEI R L L +K L + + +F +
Sbjct: 594 GRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 652
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP +E +VL+++ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 653 DPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 712
Query: 951 TIASMLSVNGAIFYRP--KDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADAD-----F 1002
TIA+ LS F P K+KI AD RK DHL ++N + W +A +
Sbjct: 713 TIAASLSFKDP-FVIPLGKEKI--ADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRY 769
Query: 1003 STQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEMELVSNPTETVN------IRKAI 1052
+C+E F+ +++ +++ E L+G V +P +N I+ I
Sbjct: 770 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSSRSPKDPKANINSDNEKIIKAVI 828
Query: 1053 TAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNS 1084
AG + +AK+ + K + V +H S
Sbjct: 829 CAGLYPKVAKIRLN----LGKKRKMVKVHTKS 856
Score = 258 (95.9 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 55/137 (40%), Positives = 90/137 (65%)
Query: 95 DYIDACVVSIL--QIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPV 152
D +D +++ L I + G ILVFL G + I T +++L +V K + +I+P+
Sbjct: 461 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDKFLIIPL 517
Query: 153 YSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGME 212
+S +PT QT++F TPP RK+V+ATNIAETS+TID+++YVID G K+ +F+++ +
Sbjct: 518 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 577
Query: 213 SLTVVPISKASANQRAG 229
+++ +SKA+A QR G
Sbjct: 578 TMSAEWVSKANAKQRKG 594
Score = 210 (79.0 bits), Expect = 6.1e-40, Sum P(2) = 6.1e-40
Identities = 40/86 (46%), Positives = 61/86 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+ L+S S +++DE HER L +D+L ++KD++ FRSDLK+++ SATL+
Sbjct: 304 TTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLN 363
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+F + P+ IPG FPV Y
Sbjct: 364 AEKFSEYFGNCPMIHIPGFTFPVVEY 389
Score = 181 (68.8 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 48/178 (26%), Positives = 86/178 (48%)
Query: 629 LDNQIDFIQALSLPGNRDKGEEEMTEKQKKK-----LNIEETKKSLPIYPFKQDLIDAVR 683
+D +++ + P N + + + Q+KK + ++ +K LP Y +++L++ +
Sbjct: 156 IDRDSEYLLQENEP-NLSLDQHLLEDLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLIN 214
Query: 684 DHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEEMG 740
+HQV +I GETG GKTTQ+ Q++ + + K +I CTQP E
Sbjct: 215 NHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVATERA 274
Query: 741 VKLGC--EVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
G GY IR + ++ I Y T G + + S+ L+S S +++DE H +
Sbjct: 275 ESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHER 332
Score = 73 (30.8 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 26/118 (22%), Positives = 50/118 (42%)
Query: 1149 ELGGDHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVR----EQLIGLVQ 1199
E DHL ++N + W +A + +C+E F+ +++ +++ E L+G
Sbjct: 744 ETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AG 802
Query: 1200 RVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNS 1251
V +P +N I+ I AG + +AK+ + K + V +H S
Sbjct: 803 FVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLN----LGKKRKMVKVHTKS 856
Score = 70 (29.7 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 1039 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1091
+++ E + I+ I AG + +AK L+ K K H ++ V IHP S E+
Sbjct: 816 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDF 874
Query: 1092 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1119
W++YH + T+ ++ TE+ LL
Sbjct: 875 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 904
Score = 70 (29.7 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 1206 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1258
+++ E + I+ I AG + +AK L+ K K H ++ V IHP S E+
Sbjct: 816 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDF 874
Query: 1259 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1286
W++YH + T+ ++ TE+ LL
Sbjct: 875 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 904
Score = 44 (20.5 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 496 SRDKIIPKLRIESRRKYL--EKRKEDKVAELEADILDDEYLFSEQE 539
S KI + +++++ K L +++K ++ + D EYL E E
Sbjct: 123 SEKKINSEKKLDNQEKKLLNQEKKTFRITDKSYIDRDSEYLLQENE 168
Score = 40 (19.1 bits), Expect = 5.1e-14, Sum P(3) = 5.1e-14
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E+I
Sbjct: 688 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI 733
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 298 (110.0 bits), Expect = 6.8e-40, Sum P(3) = 6.8e-40
Identities = 88/311 (28%), Positives = 151/311 (48%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + +++ +SKA+A Q
Sbjct: 659 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 714
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY L+D +PEI R L L +K L + + +F +
Sbjct: 715 GRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 773
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP E + L+++ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 774 DPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 833
Query: 951 TIASMLSVNGAIFYRP--KDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADAD-----F 1002
TIA+ LS F P K+KI AD RK DHL ++N + W +A +
Sbjct: 834 TIAASLSFKDP-FVIPLGKEKI--ADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRY 890
Query: 1003 STQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEMELVSNPTETVN------IRKAI 1052
+C+E F+ +++ +++ E L+G V +P +N I+ I
Sbjct: 891 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSSRNPKDPKSNINSDNEKIIKAVI 949
Query: 1053 TAGYFYHIAKL 1063
AG + +AK+
Sbjct: 950 CAGLYPKVAKI 960
Score = 260 (96.6 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 55/137 (40%), Positives = 89/137 (64%)
Query: 95 DYIDACVVSILQIHAT--QPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPV 152
D +D +++ L H + G ILVFL G + I T +++L +V K +I+P+
Sbjct: 582 DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFLIIPL 638
Query: 153 YSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGME 212
+S +PT QT++F TPP RK+V+ATNIAETS+TID+++YVID G K+ +F+++ +
Sbjct: 639 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 698
Query: 213 SLTVVPISKASANQRAG 229
+++ +SKA+A QR G
Sbjct: 699 TMSAEWVSKANAKQRKG 715
Score = 206 (77.6 bits), Expect = 6.8e-40, Sum P(3) = 6.8e-40
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+ L+S S +++DE HER L +D+L ++KD++ FR DLK+++ SATL+
Sbjct: 425 TTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLN 484
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+F + P+ IPG FPV Y
Sbjct: 485 AEKFSEYFGNCPMIHIPGFTFPVVEY 510
Score = 181 (68.8 bits), Expect = 2.7e-37, Sum P(3) = 2.7e-37
Identities = 51/190 (26%), Positives = 91/190 (47%)
Query: 612 FRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPI 671
FR+ K + +Y LL +N+ D L + K + ++ + + ++ ++ LP
Sbjct: 270 FRIRDKYIDRDSEY-LLQENEPDVALDQQLLEDLRKKKSDL-----RYIEMQHFREKLPS 323
Query: 672 YPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXXXXX 728
Y +++L++ + +HQV +I GETG GKTTQ+ Q++ + + K +I CTQP
Sbjct: 324 YGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISA 383
Query: 729 XXXXXXXXEEMGVKLGC--EVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYS 785
E G GY IR + ++ I Y T G + + S+ L+S S
Sbjct: 384 ISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVS 443
Query: 786 VMIIDEAHPK 795
+++DE H +
Sbjct: 444 HIVLDEIHER 453
Score = 69 (29.3 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 596 HYEQRKWEDEQMSSAIFRVGAK-DREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTE 654
H ++R+ +EQ+ + V AK D++ + Q D +P E+ E
Sbjct: 201 HMDERR--EEQIVQLLHSVQAKNDKDSEAQISWFAPE--DHGYGTEIPAENKPNSEKKLE 256
Query: 655 KQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGE 693
Q+KKL I + K++ I + ID RD + L+ E E
Sbjct: 257 NQEKKL-ISQEKRTFRI---RDKYID--RDSEYLLQENE 289
Score = 68 (29.0 bits), Expect = 6.8e-40, Sum P(3) = 6.8e-40
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 1039 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1091
+++ E + I+ I AG + +AK L+ K K + +T V IHP S E+
Sbjct: 937 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEF 995
Query: 1092 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1119
W++YH + T+ ++ TE+ LL
Sbjct: 996 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 1025
Score = 68 (29.0 bits), Expect = 6.8e-40, Sum P(3) = 6.8e-40
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 1206 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1258
+++ E + I+ I AG + +AK L+ K K + +T V IHP S E+
Sbjct: 937 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEF 995
Query: 1259 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1286
W++YH + T+ ++ TE+ LL
Sbjct: 996 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 1025
Score = 67 (28.6 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 1153 DHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEM 1203
DHL ++N + W +A + +C+E F+ +++ +++ E L+G V
Sbjct: 869 DHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSS 927
Query: 1204 ELVSNPTETVN------IRKAITAGYFYHIAKL 1230
+P +N I+ I AG + +AK+
Sbjct: 928 RNPKDPKSNINSDNEKIIKAVICAGLYPKVAKI 960
Score = 42 (19.8 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 509 RRKYLEKRKEDKVAELEADILDDEYLFSE 537
R KY+++ E + E E D+ D+ L +
Sbjct: 273 RDKYIDRDSEYLLQENEPDVALDQQLLED 301
Score = 40 (19.1 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E+I
Sbjct: 809 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI 854
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 308 (113.5 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 93/332 (28%), Positives = 159/332 (47%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+ +F+++ + +++ +SKA+A Q
Sbjct: 537 RKIVIATNIAETSITIDDV----VYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 592
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
C+ LY L+D +PEI R L L +K L + + +F +
Sbjct: 593 GRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 651
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
DPP E +VL+++ L L AL+ +LT LG +A P++P +GKM+L + C++ ++
Sbjct: 652 DPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 711
Query: 951 TIASMLSVNGAIFYRP--KDKIIHADTARKNFFM-LGGDHLVLLNIYNQWADAD-----F 1002
TIA+ LS F P K+KI AD RK DHL ++N + W +A +
Sbjct: 712 TIAASLSFKDP-FVIPLGKEKI--ADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRY 768
Query: 1003 STQWCYENFIQHRSMKRARDVR----EQLIGLVQRVEMELVSNPTETVN------IRKAI 1052
+C+E F+ +++ +++ E L+G V +P +N I+ I
Sbjct: 769 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AGFVSSRSPKDPKANINSDNEKIIKAVI 827
Query: 1053 TAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNS 1084
AG + +AK+ + K + V +H S
Sbjct: 828 CAGLYPKVAKIRLN----LGKKRKMVKVHTKS 855
Score = 257 (95.5 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 55/137 (40%), Positives = 89/137 (64%)
Query: 95 DYIDACVVSIL--QIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPV 152
D +D +++ L I + G ILVFL G + I T +++L +V K +I+P+
Sbjct: 460 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFLIIPL 516
Query: 153 YSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGME 212
+S +PT QT++F TPP RK+V+ATNIAETS+TID+++YVID G K+ +F+++ +
Sbjct: 517 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 576
Query: 213 SLTVVPISKASANQRAG 229
+++ +SKA+A QR G
Sbjct: 577 TMSAEWVSKANAKQRKG 593
Score = 210 (79.0 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 40/86 (46%), Positives = 61/86 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + + S+ L+S S +++DE HER L +D+L ++KD++ FRSDLK+++ SATL+
Sbjct: 303 TTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLN 362
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIY 87
A+KFSE+F + P+ IPG FPV Y
Sbjct: 363 AEKFSEYFGNCPMIHIPGFTFPVVEY 388
Score = 181 (68.8 bits), Expect = 8.1e-36, Sum P(3) = 8.1e-36
Identities = 48/178 (26%), Positives = 86/178 (48%)
Query: 629 LDNQIDFIQALSLPGNRDKGEEEMTEKQKKK-----LNIEETKKSLPIYPFKQDLIDAVR 683
+D +++ + P N ++ + + QKKK + ++ +K LP Y +++L++ +
Sbjct: 155 IDRDSEYLLQQNEP-NLGLDQQLLEDLQKKKTDPRYIEMQRFRKKLPSYGMQKELVNLIN 213
Query: 684 DHQVLIIEGETGSGKTTQIPQYLHEAGFTK---DKMKIGCTQPXXXXXXXXXXXXXEEMG 740
+HQV +I GETG GKTTQ+ Q++ + + +I CTQP E
Sbjct: 214 NHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRIVCTQPRRISAISVAERVAAERA 273
Query: 741 VKLGC--EVGYAIRFED-CTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
G GY IR + ++ I Y T G + + S+ L+S S +++DE H +
Sbjct: 274 ESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHER 331
Score = 73 (30.8 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 26/118 (22%), Positives = 50/118 (42%)
Query: 1149 ELGGDHLVLLNIYNQWADAD-----FSTQWCYENFIQHRSMKRARDVR----EQLIGLVQ 1199
E DHL ++N + W +A + +C+E F+ +++ +++ E L+G
Sbjct: 743 ETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG-AG 801
Query: 1200 RVEMELVSNPTETVN------IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNS 1251
V +P +N I+ I AG + +AK+ + K + V +H S
Sbjct: 802 FVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLN----LGKKRKMVKVHTKS 855
Score = 70 (29.7 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 1039 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1091
+++ E + I+ I AG + +AK L+ K K H ++ V IHP S E+
Sbjct: 815 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDF 873
Query: 1092 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1119
W++YH + T+ ++ TE+ LL
Sbjct: 874 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 903
Score = 70 (29.7 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 1206 VSNPTETVNIRKAITAGYFYHIAK--LSKSGSYKTAK-HNQT---VMIHPNSSLFEELP- 1258
+++ E + I+ I AG + +AK L+ K K H ++ V IHP S E+
Sbjct: 815 INSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDF 873
Query: 1259 --RWVLYHELVFTTKEFMRQVTEIESKWLL 1286
W++YH + T+ ++ TE+ LL
Sbjct: 874 HYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 903
Score = 41 (19.5 bits), Expect = 8.1e-36, Sum P(3) = 8.1e-36
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 496 SRDKIIPKLRIESRRKYL--EKRKEDKVAELEADILDDEYLFSEQE 539
S KI + +++++ K L +++K ++ + D EYL + E
Sbjct: 122 SEKKINSEKKLDNQEKKLLNQEKKTYRITDKSYIDRDSEYLLQQNE 167
Score = 40 (19.1 bits), Expect = 5.1e-14, Sum P(3) = 5.1e-14
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 81 RFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
R PV+ + K + C+ +L I A+ D V G+E+I
Sbjct: 687 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI 732
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 273 (101.2 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 65/186 (34%), Positives = 101/186 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YV+D G K+ +N G++S V +SKASANQ C+RLY++ ++
Sbjct: 817 YVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFF 876
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN-HHG 915
+VPEI R+ + VL +K++GI+ + +F F PP +L A E L LGAL+
Sbjct: 877 PQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVILGALDKEQK 936
Query: 916 DLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA-D 974
+T LG++M+ FPL P K+L+ + +C+ I+ I S LSV G F + + + D
Sbjct: 937 QITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSV-GDPFIGENELVGNMND 995
Query: 975 TARKNF 980
AR+ F
Sbjct: 996 EARREF 1001
Score = 256 (95.2 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 60/143 (41%), Positives = 81/143 (56%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFR-----------S 49
MTDG L RE +++ LA YS +IIDEAHER ++TDIL G++ +V+ R
Sbjct: 549 MTDGVLLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYK 608
Query: 50 DLKLLISSATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSIL 105
LKL+I SATL FSE F P+ + R++PV I++ K DY++
Sbjct: 609 PLKLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTC 668
Query: 106 QIHATQPLGDILVFLTGQEEIET 128
+IH P G IL+FLTGQ EI T
Sbjct: 669 KIHRKLPEGGILIFLTGQNEITT 691
Score = 247 (92.0 bits), Expect = 2.5e-39, Sum P(5) = 2.5e-39
Identities = 60/165 (36%), Positives = 89/165 (53%)
Query: 641 LPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTT 700
+P N++ + + +I++ + LP++ + +++AV H +I+ GETGSGKTT
Sbjct: 415 IPINKEMQRRAFVVEVNRTDSIQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTT 474
Query: 701 QIPQYLHEAGFTK---DKMK--IGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFED 755
Q+PQ+L+EAGF D IG TQP E+G G VGY IRF+
Sbjct: 475 QVPQFLYEAGFGNLLHDLYPGMIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDT 533
Query: 756 CTSER-----TIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
T +K+MTDG L RE +++ LA YS +IIDEAH +
Sbjct: 534 TIKNEGKENGTALKFMTDGVLLREMMTDFLLAKYSAIIIDEAHER 578
Score = 229 (85.7 bits), Expect = 3.6e-36, Sum P(3) = 3.6e-36
Identities = 49/106 (46%), Positives = 67/106 (63%)
Query: 124 EEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAE 183
EE E E ++ + S++ L +LP+YS LPT Q K+F PP +R ++ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 184 TSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TSLTI I YV+D G K+ +N G++S V +SKASANQRAG
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAG 853
Score = 62 (26.9 bits), Expect = 2.5e-39, Sum P(5) = 2.5e-39
Identities = 22/96 (22%), Positives = 48/96 (50%)
Query: 447 DSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDK--IIPKL 504
D DDD +E +E S+ +K++ +++T A S ++ RDK + P++
Sbjct: 336 DDDDDEEEEEEESKLMKSKPRHST--TAASFKE------WAEQQVRIMEGRDKNVLTPEV 387
Query: 505 RIESRRKYLEKRKEDKVAELEADILDDEYLFSEQEL 540
E ++KY ++ D+ + +D ++ Y+ +E+
Sbjct: 388 SEEIKKKYSKQTVRDEDVDHSSD--EEGYIPINKEM 421
Score = 55 (24.4 bits), Expect = 3.6e-36, Sum P(3) = 3.6e-36
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 853 KHELEDNTVPEIQRIN--LGNAV--LMLKALGINDLIHFDFLDPPPHETLVLALEQLYAL 908
KH L + EIQ++ +GN V +++ A G+ + P P++ V A++Q+ A
Sbjct: 1045 KHYLRHKMMEEIQKLRKQVGNIVENMIMSADGLQ--LEQKVKLPIPNKKQVSAMKQMIAS 1102
Query: 909 GALNH---HGDL 917
G ++ GDL
Sbjct: 1103 GFIDQVAIRGDL 1114
Score = 43 (20.2 bits), Expect = 2.2e-37, Sum P(5) = 2.2e-37
Identities = 19/87 (21%), Positives = 27/87 (31%)
Query: 442 GHFLTDSDDDRKERDEFSERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKII 501
G DDDR +DE E+ N K + K
Sbjct: 180 GSIFKSFDDDRHLQDEEGEQRSTFVDNRPKKFGGQGSGFGFANIPVIKKDTTEIPKKKYS 239
Query: 502 PKLRIESR-RKYLEKRKEDKVAELEAD 527
+ R+E +K L+K +D A D
Sbjct: 240 WRKRVEEEEKKRLKKEDDDDFASSSED 266
Score = 43 (20.2 bits), Expect = 8.6e-17, Sum P(5) = 8.6e-17
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 646 DKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQY 705
D ++E E+++ KL + + S FK+ + QV I+EG + T ++ +
Sbjct: 336 DDDDDEEEEEEESKLMKSKPRHSTTAASFKE-----WAEQQVRIMEGRDKNVLTPEVSEE 390
Query: 706 LHEAGFTKDKMK 717
+ + ++K ++
Sbjct: 391 IKKK-YSKQTVR 401
Score = 42 (19.8 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 6/28 (21%), Positives = 20/28 (71%)
Query: 1176 ENFIQHRSMKRARDVREQLIGLVQRVEM 1203
+++++H+ M+ + +R+Q+ +V+ + M
Sbjct: 1045 KHYLRHKMMEEIQKLRKQVGNIVENMIM 1072
Score = 38 (18.4 bits), Expect = 2.5e-39, Sum P(5) = 2.5e-39
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
K +L +AET + N + + G KQ +E+L + +A N R
Sbjct: 110 KKILLEKLAETKMDTSNFAALKELGKGKQTKKEEM--IEALELERQGRADENTR 161
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 305 (112.4 bits), Expect = 5.0e-39, Sum P(3) = 5.0e-39
Identities = 103/381 (27%), Positives = 180/381 (47%)
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGME 816
T+E+ +I + R+ + ++A S+ I D V+V+D G K+ +++
Sbjct: 582 TAEQRLIFERAPPNI-RKIVLATNMAEASITINDV----VFVVDCGKAKETTYDALNNTP 636
Query: 817 SLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 876
L IS+ASA Q +C+ LY Y + +PE+ R L + L +
Sbjct: 637 CLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYD-AFAEYQLPELLRTPLNSLCLQI 695
Query: 877 KALGINDLIHF--DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMG 934
K+L + + F L P + A+ L +GAL+ +LT LG+ ++ P+DP +G
Sbjct: 696 KSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLG 755
Query: 935 KMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLG-GDHLVLLNI 993
KML+ ++C + I+TI S LSV F P+DK A +A+ F DH+ L+
Sbjct: 756 KMLIMGAIFRCFDPILTIVSGLSVRDP-FLLPQDKKDLALSAKLRFSAKDYSDHMALVRA 814
Query: 994 YNQWADAD---FSTQWCYENFIQHRSMKRARDVREQLIGLVQR---VEMELVSNPTETVN 1047
+ W DA+ + ++C+ NF+ ++++ +R+Q +++ V +L N + N
Sbjct: 815 FEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHN 874
Query: 1048 ---IRKAITAGYFYHIAKL---SKSGSYKTAKHNQTVMIHPNS--SLFEELPR-WVLYHE 1098
+R I +G F IA + S S+KT Q V ++ NS S F +P W+++ E
Sbjct: 875 QSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQ-VSLYANSVNSRFPTIPYPWLVFGE 933
Query: 1099 LVFTTKEFMRQVTEIESKWLL 1119
V +R T + L+
Sbjct: 934 KVKVNAVLIRDSTGVPDSSLI 954
Score = 220 (82.5 bits), Expect = 5.0e-39, Sum P(3) = 5.0e-39
Identities = 59/207 (28%), Positives = 97/207 (46%)
Query: 599 QRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQID-FI------QALSLPGNRDKGEEE 651
Q + +Q+SS D + +Q E L D D F+ + L R + +
Sbjct: 183 QEHLDSQQLSSGKANECVADSQPPKQTEELPDENSDSFLDGSVMEKVLQRRSMRMRNMQR 242
Query: 652 MTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF 711
++ + + E +K+LP + K+ L+ A+ +QV+++ GETG GKTTQ+PQY+ E+
Sbjct: 243 TWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEI 302
Query: 712 TKDK---MKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTD 768
+ I CTQP E G LG VG+ +R E + T + + T
Sbjct: 303 ESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTS 362
Query: 769 GTLHREFLSEPDLASYSVMIIDEAHPK 795
G L R LS+ +L + + +DE H +
Sbjct: 363 GILLRRLLSDRNLNGVTHVFVDEIHER 389
Score = 192 (72.6 bits), Expect = 3.4e-28, Sum P(3) = 3.4e-28
Identities = 43/116 (37%), Positives = 70/116 (60%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G +LVFLTG ++I + ++ Q + L +++L + ++ T Q IF PPN R
Sbjct: 540 GAVLVFLTGWDDIRSLSD--QIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIR 597
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
K+VLATN+AE S+TI+++++V+D G K+ +++ L IS+ASA QR G
Sbjct: 598 KIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRG 653
Score = 164 (62.8 bits), Expect = 3.4e-28, Sum P(3) = 3.4e-28
Identities = 33/87 (37%), Positives = 54/87 (62%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R LS+ +L + + +DE HER ++ D L ++K+++ R DL+L++ SATL+
Sbjct: 361 TSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLN 420
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A+ FS ++ AP IPG PV ++
Sbjct: 421 AELFSNYYGGAPTIHIPGFTHPVKAHF 447
Score = 108 (43.1 bits), Expect = 3.4e-28, Sum P(3) = 3.4e-28
Identities = 38/149 (25%), Positives = 71/149 (47%)
Query: 1153 DHLVLLNIYNQWADAD---FSTQWCYENFIQHRSMKRARDVREQLIGLVQR---VEMELV 1206
DH+ L+ + W DA+ + ++C+ NF+ ++++ +R+Q +++ V +L
Sbjct: 807 DHMALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLA 866
Query: 1207 SNPTETVN---IRKAITAGYFYHIAKL---SKSGSYKTAKHNQTVMIHPNS--SLFEELP 1258
N + N +R I +G F IA + S S+KT Q V ++ NS S F +P
Sbjct: 867 LNNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQ-VSLYANSVNSRFPTIP 925
Query: 1259 R-WVLYHELVFTTKEFMRQVTEIESKWLL 1286
W+++ E V +R T + L+
Sbjct: 926 YPWLVFGEKVKVNAVLIRDSTGVPDSSLI 954
Score = 47 (21.6 bits), Expect = 6.8e-22, Sum P(3) = 6.8e-22
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 608 SSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKL 660
SS I G+ Q + +LD IDF +L + K +EE+ + +KKL
Sbjct: 951 SSLILFGGSLSTGVQVGHLKMLDGYIDFFMDPNLAESYVKLKEELDKLLQKKL 1003
Score = 40 (19.1 bits), Expect = 3.6e-21, Sum P(3) = 3.6e-21
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 442 GHFLTDSDDDRKERDEFSERLKNRDKNNTKNV 473
G F+ D R + + E ++D N K++
Sbjct: 1032 GRFVFGRDTKRPSQPQIGENKHSKDGTNPKSL 1063
Score = 39 (18.8 bits), Expect = 5.0e-39, Sum P(3) = 5.0e-39
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 435 PKVRAFMGHFLTDSDDDRKERDEFSE 460
P R F+GH DD E EF E
Sbjct: 60 PIRRRFIGHTAEQFSDDEYEC-EFEE 84
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 267 (99.0 bits), Expect = 9.4e-39, Sum P(5) = 9.4e-39
Identities = 61/168 (36%), Positives = 98/168 (58%)
Query: 630 DNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLI 689
D + D L+LP +++ ++ K+ I++++ LPI+ + +++A+ ++ V +
Sbjct: 199 DEESDNEDILALPTTTVINRKKVIVERSKE--IQKSRAELPIFAEEMRIVEAINENLVTV 256
Query: 690 IEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGC--EV 747
+ GETGSGKTTQIPQ+L+EAG+ + IG T+P + +GV+L EV
Sbjct: 257 VCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRVAAIAMA----QRVGVELAKPDEV 312
Query: 748 GYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y IR+E SE T I +MTDG L +E + L YSV++IDEAH +
Sbjct: 313 SYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHER 360
Score = 238 (88.8 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 55/135 (40%), Positives = 81/135 (60%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L YSV++IDEAHER++++D+L G++ IV RS L+L+I
Sbjct: 331 MTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIM 390
Query: 57 SATLDAQKFS--EFFD--DAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQP 112
SATL F+ + F V ++ R+FPV +++ K DYI + +IH T P
Sbjct: 391 SATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLP 450
Query: 113 LGDILVFLTGQEEIE 127
G ILVF+TGQ E++
Sbjct: 451 PGAILVFVTGQHEVK 465
Score = 193 (73.0 bits), Expect = 9.4e-39, Sum P(5) = 9.4e-39
Identities = 53/169 (31%), Positives = 86/169 (50%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
YVID GF K+ ++S TG+ V IS+AS +Q +RLY++ Y+ +
Sbjct: 621 YVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQ-DF 679
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNH--- 913
PEI VL LK++ I +++F F P + L A ++L LGAL+
Sbjct: 680 VKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTK 739
Query: 914 HGD----LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
+G +TKLG+ +A FPL P K + ++++ + + + S+LSV
Sbjct: 740 NGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSV 788
Score = 180 (68.4 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 40/83 (48%), Positives = 53/83 (63%)
Query: 147 LIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFN 206
L LP+YS L Q ++F TP R V++TN+AETSLTI + YVID GF K+ ++
Sbjct: 575 LYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYD 634
Query: 207 SRTGMESLTVVPISKASANQRAG 229
S TG+ V IS+AS +QRAG
Sbjct: 635 SITGVSRFAVCRISQASGDQRAG 657
Score = 97 (39.2 bits), Expect = 9.4e-39, Sum P(5) = 9.4e-39
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 1232 KSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELV-FTTKEFMRQVTEIESKWLLEVAP 1290
+ G+Y+T V I P S +F E P +V+Y ELV K+ M V ++ +WL +A
Sbjct: 929 QKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAE 988
Query: 1291 HY 1292
Y
Sbjct: 989 SY 990
Score = 97 (39.2 bits), Expect = 3.0e-38, Sum P(4) = 3.0e-38
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 1065 KSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELV-FTTKEFMRQVTEIESKWLLEVAP 1123
+ G+Y+T V I P S +F E P +V+Y ELV K+ M V ++ +WL +A
Sbjct: 929 QKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAE 988
Query: 1124 HY 1125
Y
Sbjct: 989 SY 990
Score = 76 (31.8 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIF----YR---P--- 966
+TKLG+ +A FPL P K + ++++ + + + S+LSV + R P
Sbjct: 747 ITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEET 806
Query: 967 KDKIIHADTARKNFFM-LG----GDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRAR 1021
K+ + + R+ + G GD VL++ + ++ + C + ++ +++ AR
Sbjct: 807 KELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEAR 866
Query: 1022 DVREQLIGLV 1031
+R+QL +V
Sbjct: 867 KLRQQLTNIV 876
Score = 49 (22.3 bits), Expect = 9.4e-39, Sum P(5) = 9.4e-39
Identities = 15/70 (21%), Positives = 35/70 (50%)
Query: 1129 RELEDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRAR 1188
+EL + K+ + + A GD VL++ + ++ + C + ++ +++ AR
Sbjct: 807 KELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEAR 866
Query: 1189 DVREQLIGLV 1198
+R+QL +V
Sbjct: 867 KLRQQLTNIV 876
Score = 48 (22.0 bits), Expect = 9.4e-39, Sum P(5) = 9.4e-39
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 426 PSCLKVF----KTPKVRAFMGHFLTDSDDDRKERDEFSERLKN-RDKNNTKNV 473
P LKVF KT R ++ TD + +E +E E + D NT V
Sbjct: 115 PEKLKVFSGKTKTEAKRTQQDYYPTDDESSSEEEEEEEEGDNDIEDAGNTVEV 167
Score = 39 (18.8 bits), Expect = 1.0e-14, Sum P(4) = 1.0e-14
Identities = 7/25 (28%), Positives = 18/25 (72%)
Query: 645 RDKGEEEMTEKQKKKLNIEETKKSL 669
++K ++T++ K+KL +++K+L
Sbjct: 50 KEKEVAKLTKQAKRKLAAVQSRKAL 74
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 290 (107.1 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 95/350 (27%), Positives = 166/350 (47%)
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGME 816
+ ++ ++K G R+ + ++A S+ + D V+VID G K+ +F++ +
Sbjct: 667 SDQKKVLKNPPAGV--RKIILSTNIAETSITVNDV----VFVIDSGKVKEKSFDALNFVT 720
Query: 817 SLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 876
L +V ISKASA Q CFRL++ +++ LE T PE+ R+ L L
Sbjct: 721 MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHT 779
Query: 877 KALG-INDLIHFDFL----DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDP 931
K L +N I DFL +PPP + A++ L + A++ DLT+LG +A+ P++P
Sbjct: 780 KLLAPVNCAIA-DFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEP 838
Query: 932 MMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLG--GDHLV 989
+GKM+L + KC++ I+TIA L+ + A + F G DH+
Sbjct: 839 HLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMA 898
Query: 990 LLNIYNQW--ADAD-FSTQWCYENFIQHRSMKRARDVREQLIGLVQ-----RVE-----M 1036
LL + W A +D + +C +NF+ +M+ +R QL+G ++ R
Sbjct: 899 LLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIR 958
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL 1086
++ +N ++ A+ AG + H+ + + + V HP S L
Sbjct: 959 DVNTNSENWAVVKAALVAGMYPHLVHVDRENVVLAGPKEKKVRFHPTSVL 1008
Score = 220 (82.5 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 46/155 (29%), Positives = 88/155 (56%)
Query: 643 GNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQI 702
G + G ++ K+ + + ++SLP++ +++++ +++++V++I GETGSGKTTQI
Sbjct: 167 GRLNNGIPQIPVKRGES-EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQI 225
Query: 703 PQYLHEAGFTKD-KMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERT 761
PQ+L + F +I CTQP E ++G +GY IR E S +T
Sbjct: 226 PQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKT 285
Query: 762 IIKYMTDGTLHREFLS-EPDLASYSVMIIDEAHPK 795
++ + T+G L R ++ + L++ + +I+DE H +
Sbjct: 286 LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHER 320
Score = 200 (75.5 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 46/117 (39%), Positives = 71/117 (60%)
Query: 114 GDILVFLTGQEEIETCNE-ILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA 172
G IL+FL G +EI + IL D +R + ++SN+ T Q K+ P
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDD-KRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGV 680
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK++L+TNIAETS+T++++++VID G K+ +F++ + L +V ISKASA QR G
Sbjct: 681 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKG 737
Score = 141 (54.7 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 2 TDGTLHREFLS-EPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
T+G L R ++ + L++ + +I+DE HER +D L ++D+++ LKL++SSA L
Sbjct: 291 TNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAAL 350
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPV 84
D F +F PV I GR F V
Sbjct: 351 DVNLFIRYFGSCPVIYIQGRPFEV 374
Score = 95 (38.5 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 33/144 (22%), Positives = 60/144 (41%)
Query: 1125 YYKPRELEDSTNKKMPKTLGKSRAELG--GDHLVLLNIYNQW--ADAD-FSTQWCYENFI 1179
Y P L ++K L + R G DH+ LL + W A +D + +C +NF+
Sbjct: 865 YRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFL 924
Query: 1180 QHRSMKRARDVREQLIGLVQ-----RVE-----MELVSNPTETVNIRKAITAGYFYHIAK 1229
+M+ +R QL+G ++ R ++ +N ++ A+ AG + H+
Sbjct: 925 SQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPHLVH 984
Query: 1230 LSKSGSYKTAKHNQTVMIHPNSSL 1253
+ + + V HP S L
Sbjct: 985 VDRENVVLAGPKEKKVRFHPTSVL 1008
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 291 (107.5 bits), Expect = 2.5e-38, Sum P(4) = 2.5e-38
Identities = 82/265 (30%), Positives = 129/265 (48%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A S+ I D VYVID G K+ +++ GMESL +S+A+A Q
Sbjct: 914 NIAETSITIDDV----VYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVA 969
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI---NDLIH-FDFLDPPPH 895
CF L+T+ Y H+L +PEIQR+ L L +K L + ++L F L PPH
Sbjct: 970 SGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPH 1029
Query: 896 -ETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
++L + +L LGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 1030 TDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAA 1089
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA-----DADFSTQWCYE 1009
L+ F P DK A+ + F D+L LL Y W S +C +
Sbjct: 1090 SLAFKSP-FVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQ 1148
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRV 1034
NF+ R ++ ++ Q L+ +
Sbjct: 1149 NFLSGRVLQEMASLKRQFTELLSDI 1173
Score = 228 (85.3 bits), Expect = 4.1e-30, Sum P(4) = 4.1e-30
Identities = 51/135 (37%), Positives = 81/135 (60%)
Query: 95 DYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYS 154
+ I+A + I+ + P G ILVFL G EI+ E LQ + +I P++S
Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
+L ++ Q +F+ P K++++TNIAETS+TID+++YVID G K+ +++ GMESL
Sbjct: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
Query: 215 TVVPISKASANQRAG 229
+S+A+A QR G
Sbjct: 949 EDTFVSQANALQRKG 963
Score = 216 (81.1 bits), Expect = 2.5e-38, Sum P(4) = 2.5e-38
Identities = 52/164 (31%), Positives = 81/164 (49%)
Query: 637 QALSLPGNRDKGEEEMTEKQKKKL--NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
QA S+ K ++ KQ + +I + ++SLP + ++ +++ +R HQV++I G T
Sbjct: 510 QAKSVHAENGKICKQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMT 569
Query: 695 GSGKTTQIPQYLHEAGFTKDKMKIG---CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAI 751
G GKTTQIPQ++ + K+ CTQP +E ++G VGY I
Sbjct: 570 GCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQI 629
Query: 752 RFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
R E S T + Y T G L R + L S +I+DE H +
Sbjct: 630 RLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHER 673
Score = 191 (72.3 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R + L S +I+DE HERT +D L ++KDIV R L++++ SATL+
Sbjct: 645 TTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLN 704
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A+ FS++F+ PV IPGR FPVD ++
Sbjct: 705 AELFSDYFNSCPVITIPGRTFPVDQFF 731
Score = 60 (26.2 bits), Expect = 2.5e-38, Sum P(4) = 2.5e-38
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1065 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1113
KS K K++ V IHP+S ++ + P ++LYHE + T++ F+R + +
Sbjct: 1248 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMV 1300
Score = 60 (26.2 bits), Expect = 2.5e-38, Sum P(4) = 2.5e-38
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1232 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1280
KS K K++ V IHP+S ++ + P ++LYHE + T++ F+R + +
Sbjct: 1248 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMV 1300
Score = 53 (23.7 bits), Expect = 4.1e-30, Sum P(4) = 4.1e-30
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWA-----DADFSTQWCYENFIQHRSMKR 1186
E++ KK+ S D+L LL Y W S +C +NF+ R ++
Sbjct: 1105 EEANQKKLEFAFANS------DYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQE 1158
Query: 1187 ARDVREQLIGLVQRV 1201
++ Q L+ +
Sbjct: 1159 MASLKRQFTELLSDI 1173
Score = 42 (19.8 bits), Expect = 2.5e-38, Sum P(4) = 2.5e-38
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 496 SRDKIIPKLRIESRRKYLEKRKEDKVAELEADILDDE 532
SR K PK ++ + ++ ++KV L D+ + +
Sbjct: 86 SRPKWKPKAKVPLQTLHMTSENQEKVKALLRDLQEQD 122
Score = 39 (18.8 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 248 GEEVLRGCAHVLGEEV 263
G+ L+G +H++ +EV
Sbjct: 655 GDTALQGVSHIIVDEV 670
>UNIPROTKB|F1RFN6 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:CU468581
Ensembl:ENSSSCT00000010698 Uniprot:F1RFN6
Length = 1158
Score = 265 (98.3 bits), Expect = 2.6e-38, Sum P(4) = 2.6e-38
Identities = 62/142 (43%), Positives = 83/142 (58%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD----LKLLIS 56
MTDG L +E + L Y V+IIDEAHER+++TDIL GL+ IV R+ LKLLI
Sbjct: 361 MTDGVLLKEIQKDFLLLKYKVLIIDEAHERSVYTDILIGLLSRIVCLRAKRHLPLKLLIM 420
Query: 57 SATLDAQKFSE----FFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHATQ 111
SATL + F++ F PV ++ R+FPV +++ K P DY C + +IH
Sbjct: 421 SATLRVEDFTQNQRLFAQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRML 480
Query: 112 PLGDILVFLTGQEEIET-CNEI 132
P G ILVFLTGQ E+ C +
Sbjct: 481 PAGGILVFLTGQAEVHALCRRL 502
Score = 232 (86.7 bits), Expect = 5.6e-36, Sum P(4) = 5.6e-36
Identities = 55/142 (38%), Positives = 83/142 (58%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++E + LPI +Q +++AV +H ++I+ GETGSGKTTQ+PQ+L+EAG++++ G +
Sbjct: 255 MQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSREG---GMS 311
Query: 722 QPXXXXXXXXXXXXXEEMGV--KLGCE---VGYAIRFEDCTSERTIIKYMTDGTLHREFL 776
P +M + C V Y IR+E +E T IK+MTDG L +E
Sbjct: 312 PPVGPFNPCQFITQGSKMKILSPRACPHRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 371
Query: 777 SEPDLASYSVMIIDEAHPK-VY 797
+ L Y V+IIDEAH + VY
Sbjct: 372 KDFLLLKYKVLIIDEAHERSVY 393
Score = 161 (61.7 bits), Expect = 2.6e-38, Sum P(4) = 2.6e-38
Identities = 54/177 (30%), Positives = 81/177 (45%)
Query: 804 CKQNNFNSRT---GMESLTVVPISKASANQXXXXXXXXXXXK-CF---RLYTAWAYKHEL 856
C SRT G++ +++ + AS CF RLY++ ++ +
Sbjct: 634 CTFPGSRSRTRGRGVKEISIAKVPGASGGMVAGGAMGLAPTHGCFSWCRLYSSAVFE-DF 692
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
E PEI R + + +L +KAL I +I+F F PP E L+ A E L ALGAL
Sbjct: 693 EKFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSIEALIAAEELLIALGALQAPPK 752
Query: 917 ---------------LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
+T LGR MA FP+ P KML S ++ C+ +TI + ++V
Sbjct: 753 TERMKQLQRSRLSCPITVLGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTV 809
Score = 140 (54.3 bits), Expect = 2.6e-38, Sum P(4) = 2.6e-38
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 1068 SYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1127
+YKT ++ V IHP+S LF+ELP +V+Y E+V TTK +M+ V+ +E +W+ + P Y +
Sbjct: 956 TYKTPLLDEPVFIHPSSVLFKELPDFVVYQEIVETTKMYMKGVSTVEVQWIPVLLPSYCQ 1015
Query: 1128 -PRELED 1133
+ LE+
Sbjct: 1016 FDKPLEE 1022
Score = 140 (54.3 bits), Expect = 2.6e-38, Sum P(4) = 2.6e-38
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 1235 SYKTAKHNQTVMIHPNSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYK 1294
+YKT ++ V IHP+S LF+ELP +V+Y E+V TTK +M+ V+ +E +W+ + P Y +
Sbjct: 956 TYKTPLLDEPVFIHPSSVLFKELPDFVVYQEIVETTKMYMKGVSTVEVQWIPVLLPSYCQ 1015
Query: 1295 -PRELED 1300
+ LE+
Sbjct: 1016 FDKPLEE 1022
Score = 52 (23.4 bits), Expect = 5.6e-36, Sum P(4) = 5.6e-36
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 633 IDFIQALSLPGNRDKGEEE--MTEKQKKKLNIEETK 666
+D AL LPG + K + +++K+KK L +E K
Sbjct: 43 VDASNALVLPGKKKKKSKAPPLSKKEKKPLTKKERK 78
Score = 40 (19.1 bits), Expect = 2.6e-38, Sum P(4) = 2.6e-38
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 438 RAF--MGHFLTDSDDDRKERDEFSERLKNRDKNNTKNVATSRQ 478
RAF H L + DD + +E + K+R + AT Q
Sbjct: 504 RAFPLARHRLPEKDDQKDSVEEMRKFKKSRARARKAQAATLPQ 546
Score = 38 (18.4 bits), Expect = 2.2e-23, Sum P(4) = 2.2e-23
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 926 EFPLDPMMGKML-LASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHA 973
+FP+ K L +C ++ I ML G + + +HA
Sbjct: 449 QFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHA 497
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 287 (106.1 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 98/349 (28%), Positives = 163/349 (46%)
Query: 759 ERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESL 818
++ ++K G R+ + ++A S+ + D V+VID G K+ +F++ + + L
Sbjct: 581 QKNVLKTPPSGI--RKIILSTNIAETSITVNDV----VFVIDSGKMKEKSFDALSCVTML 634
Query: 819 TVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKA 878
V ISKASA Q CF L++ +++ LE T PE++R+ L L K
Sbjct: 635 KTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQT-PELRRMPLQELCLHTKL 693
Query: 879 LGINDLIHFDFL----DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMG 934
L + DFL DPPP + A++ L + A++ DLT+LG +AE P++P +G
Sbjct: 694 LAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLG 753
Query: 935 KMLLASEKYKCVEEIVTIASMLSVNGAIFYRPK--DKIIHADTARKNFFM-LGGDHLVLL 991
KM+L + KC++ I+TIA L+ F P + A RK DH+VLL
Sbjct: 754 KMVLCAVVLKCLDPILTIACTLAYRDP-FVLPTVASQKRAAMLCRKRLAAGTFSDHMVLL 812
Query: 992 NIYNQWADADFSTQW----CYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTE--- 1044
+ W A S W C +NF+ +M+ +R QL+G ++ + +
Sbjct: 813 RAFQAWQKAR-SDGWERVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRARGGADIRD 871
Query: 1045 -TVN------IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL 1086
VN ++ A+ AG + ++ + + T + V HP S L
Sbjct: 872 VNVNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVL 920
Score = 221 (82.9 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 46/132 (34%), Positives = 79/132 (59%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKD-KMKIGCTQPX 724
++SLP++ K++++ +++++V++I GETGSGKTTQIPQ+L + + +I CTQP
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCRIFCTQPR 159
Query: 725 XXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS-EPDLAS 783
E K+G VGY IR E S RT++ + T+G L R ++ + L++
Sbjct: 160 RLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSALST 219
Query: 784 YSVMIIDEAHPK 795
+ +I+DE H +
Sbjct: 220 VTHVIVDEVHER 231
Score = 199 (75.1 bits), Expect = 4.0e-26, Sum P(3) = 4.0e-26
Identities = 47/118 (39%), Positives = 77/118 (65%)
Query: 114 GDILVFLTGQEEIETCNE-ILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA 172
G IL+FL G +EI + + I+ D R + + + + ++SN+ T + K L TPP+
Sbjct: 533 GAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQT-LDQKNVLKTPPSG 591
Query: 173 -RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK++L+TNIAETS+T++++++VID G K+ +F++ + + L V ISKASA QR G
Sbjct: 592 IRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRG 649
Score = 153 (58.9 bits), Expect = 4.0e-26, Sum P(3) = 4.0e-26
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 2 TDGTLHREFLS-EPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
T+G L R ++ + L++ + +I+DE HER +D L ++DI++ +++LKL+ISSA L
Sbjct: 202 TNGILLRTLMAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAAL 261
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPV 84
DA F ++F PV I GR F V
Sbjct: 262 DANLFIKYFGSCPVIHIQGRPFEV 285
Score = 94 (38.1 bits), Expect = 4.0e-26, Sum P(3) = 4.0e-26
Identities = 35/145 (24%), Positives = 59/145 (40%)
Query: 1125 YYKPRELEDSTNKKMPKTLGKSRAELG--GDHLVLLNIYNQWADADFSTQW----CYENF 1178
Y P L ++K L + R G DH+VLL + W A S W C +NF
Sbjct: 777 YRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAWQKAR-SDGWERVFCEKNF 835
Query: 1179 IQHRSMKRARDVREQLIGLVQRVEMELVSNPTE----TVN------IRKAITAGYFYHIA 1228
+ +M+ +R QL+G ++ + + VN ++ A+ AG + ++
Sbjct: 836 LSQATMEIIIGMRTQLLGQLRALGFVRARGGADIRDVNVNSENWAVVKAALVAGMYPNLV 895
Query: 1229 KLSKSGSYKTAKHNQTVMIHPNSSL 1253
+ + T + V HP S L
Sbjct: 896 HVDRENLVLTGPKEKKVRFHPTSVL 920
Score = 38 (18.4 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 707 HEAGFTKDKMKIGCTQ 722
H GF + +IGC Q
Sbjct: 1248 HFQGFARMSSEIGCEQ 1263
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 288 (106.4 bits), Expect = 3.9e-38, Sum P(2) = 3.9e-38
Identities = 95/350 (27%), Positives = 167/350 (47%)
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGME 816
+ ++ ++K G R+ + ++A S+ + D V+VID G K+ +F++ +
Sbjct: 683 SDQKKVLKNPPAGV--RKIILSTNIAETSITVNDV----VFVIDSGKVKEKSFDALNFVT 736
Query: 817 SLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 876
L +V ISKASA Q CFRL++ +++ LE T PE+ R+ L L
Sbjct: 737 MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHT 795
Query: 877 KALG-INDLIHFDFL----DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDP 931
K L +N I DFL +PPP + A++ L + A++ DLT+LG +A+ P++P
Sbjct: 796 KLLAPVNCTIA-DFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEP 854
Query: 932 MMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLG--GDHLV 989
+GKM+L + KC++ I+TIA L+ + A + F G DH+
Sbjct: 855 HLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMA 914
Query: 990 LLNIYNQW--ADAD-FSTQWCYENFIQHRSMKRARDVREQLIGLVQ-----RVE-----M 1036
LL + W A +D + +C +NF+ +M+ +R QL+G ++ R
Sbjct: 915 LLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIR 974
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL 1086
++ +N ++ A+ AG + ++ + + T + V HP S L
Sbjct: 975 DVNTNSENWAVVKAALVAGMYPNLVHVDRENVILTGPKEKKVRFHPTSVL 1024
Score = 220 (82.5 bits), Expect = 3.9e-38, Sum P(2) = 3.9e-38
Identities = 46/155 (29%), Positives = 88/155 (56%)
Query: 643 GNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQI 702
G + G ++ K+ + + ++SLP++ +++++ +++++V++I GETGSGKTTQI
Sbjct: 183 GRLNNGIPQVPVKRGES-EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQI 241
Query: 703 PQYLHEAGFTKD-KMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERT 761
PQ+L + F +I CTQP E ++G +GY IR E S +T
Sbjct: 242 PQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKT 301
Query: 762 IIKYMTDGTLHREFLS-EPDLASYSVMIIDEAHPK 795
++ + T+G L R ++ + L++ + +I+DE H +
Sbjct: 302 LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHER 336
Score = 200 (75.5 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 46/117 (39%), Positives = 71/117 (60%)
Query: 114 GDILVFLTGQEEIETCNE-ILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA 172
G IL+FL G +EI + IL D +R + ++SN+ T Q K+ P
Sbjct: 638 GAILIFLPGYDEIVGLRDRILFDD-KRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGV 696
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK++L+TNIAETS+T++++++VID G K+ +F++ + L +V ISKASA QR G
Sbjct: 697 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKG 753
Score = 141 (54.7 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 2 TDGTLHREFLS-EPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
T+G L R ++ + L++ + +I+DE HER +D L ++D+++ LKL++SSA L
Sbjct: 307 TNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAAL 366
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPV 84
D F +F PV I GR F V
Sbjct: 367 DVNLFIRYFGSCPVIYIQGRPFEV 390
Score = 93 (37.8 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 33/144 (22%), Positives = 61/144 (42%)
Query: 1125 YYKPRELEDSTNKKMPKTLGKSRAELG--GDHLVLLNIYNQW--ADAD-FSTQWCYENFI 1179
Y P L ++K L + R G DH+ LL + W A +D + +C +NF+
Sbjct: 881 YRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFL 940
Query: 1180 QHRSMKRARDVREQLIGLVQ-----RVE-----MELVSNPTETVNIRKAITAGYFYHIAK 1229
+M+ +R QL+G ++ R ++ +N ++ A+ AG + ++
Sbjct: 941 SQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVH 1000
Query: 1230 LSKSGSYKTAKHNQTVMIHPNSSL 1253
+ + T + V HP S L
Sbjct: 1001 VDRENVILTGPKEKKVRFHPTSVL 1024
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 284 (105.0 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 95/350 (27%), Positives = 167/350 (47%)
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGME 816
+ ++ ++K G R+ + ++A S+ + D V+VID G K+ +F++ +
Sbjct: 668 SDQKKVLKNPPAGV--RKIILSTNIAETSITVNDV----VFVIDSGKVKEKSFDALNFVT 721
Query: 817 SLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 876
L +V ISKASA Q CFRL++ +++ LE T PE+ R+ L L
Sbjct: 722 MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHT 780
Query: 877 KALG-INDLIHFDFL----DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDP 931
K L +N I DFL +PPP + A++ L + A++ DLT+LG +A+ P++P
Sbjct: 781 KLLAPVNCPIA-DFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEP 839
Query: 932 MMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGG--DHLV 989
+GKM+L + KC++ I+TIA L+ + A + F G DH+
Sbjct: 840 HLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMA 899
Query: 990 LLNIYNQW--ADAD-FSTQWCYENFIQHRSMKRARDVREQLIGLVQ-----RVE-----M 1036
LL + W A +D + +C +NF+ +M+ +R QL+G ++ R
Sbjct: 900 LLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIR 959
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL 1086
++ +N ++ A+ AG + ++ + + T + V HP S L
Sbjct: 960 DVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASVL 1009
Score = 220 (82.5 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 46/155 (29%), Positives = 88/155 (56%)
Query: 643 GNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQI 702
G + G ++ K+ + + ++SLP++ +++++ +++++V++I GETGSGKTTQI
Sbjct: 168 GRLNNGIPQIPVKRGES-EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQI 226
Query: 703 PQYLHEAGFTKD-KMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERT 761
PQ+L + F +I CTQP E ++G +GY IR E S +T
Sbjct: 227 PQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKT 286
Query: 762 IIKYMTDGTLHREFLS-EPDLASYSVMIIDEAHPK 795
++ + T+G L R ++ + L++ + +I+DE H +
Sbjct: 287 LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHER 321
Score = 199 (75.1 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 45/117 (38%), Positives = 71/117 (60%)
Query: 114 GDILVFLTGQEEIETCNE-ILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA 172
G +L+FL G +EI + IL D +R + ++SN+ T Q K+ P
Sbjct: 623 GAVLIFLPGYDEIVGLRDRILFDD-KRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGV 681
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK++L+TNIAETS+T++++++VID G K+ +F++ + L +V ISKASA QR G
Sbjct: 682 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKG 738
Score = 141 (54.7 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 2 TDGTLHREFLS-EPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
T+G L R ++ + L++ + +I+DE HER +D L ++D+++ LKL++SSA L
Sbjct: 292 TNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAAL 351
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPV 84
D F +F PV I GR F V
Sbjct: 352 DVNLFIRYFGSCPVIYIQGRPFEV 375
Score = 91 (37.1 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 33/144 (22%), Positives = 61/144 (42%)
Query: 1125 YYKPRELEDSTNKKMPKTLGKSRAELGG--DHLVLLNIYNQW--ADAD-FSTQWCYENFI 1179
Y P L ++K L + R G DH+ LL + W A +D + +C +NF+
Sbjct: 866 YRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFL 925
Query: 1180 QHRSMKRARDVREQLIGLVQ-----RVE-----MELVSNPTETVNIRKAITAGYFYHIAK 1229
+M+ +R QL+G ++ R ++ +N ++ A+ AG + ++
Sbjct: 926 SQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVH 985
Query: 1230 LSKSGSYKTAKHNQTVMIHPNSSL 1253
+ + T + V HP S L
Sbjct: 986 VDRENLVLTGPKEKKVRFHPASVL 1009
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 271 (100.5 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 84/324 (25%), Positives = 152/324 (46%)
Query: 762 IIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVV 821
+ Y +G R+ + ++A S + +D +V+D G K+ NF++ + L
Sbjct: 419 VFDYAPEGM--RKCIVSTNIAETS-LTVDGVR---FVVDSGKVKEMNFDATCKGQRLKEF 472
Query: 822 PISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI 881
+SK+SA+Q CFRLYTA Y + E PEI R+ L +L + ++G+
Sbjct: 473 WVSKSSADQRKGRAGRTGPGVCFRLYTAEQY-NAFEAYPTPEIYRVPLDTMLLQMVSMGL 531
Query: 882 NDLIHFDFLDPPPHETL---VLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLL 938
D+ F F++ P E + +LAL+Q AL +T LGR +A P++ +GKMLL
Sbjct: 532 PDVRAFPFIEAPETERIEQTILALKQHCALSV---EEKITPLGRSLANLPVELSIGKMLL 588
Query: 939 ASEKYKCVEEIVTIASMLSVNGAIFYRPK-DKIIHADTARKNFFMLGGDHLVLLNIYNQW 997
+ VE+++T+A+MLSV + R D+ R++ GD L+ +YN W
Sbjct: 589 MGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQ--RCVRERESLESDHGDLFTLVRLYNVW 646
Query: 998 ADA----DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP-TETVNIRKAI 1052
D + QWC I+ + +R+Q +++ M + S+ ++ + +A
Sbjct: 647 VQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTSAERAT 706
Query: 1053 TAGYFYHIAKLSKSGSYKTAKHNQ 1076
G + + + ++ + +
Sbjct: 707 RHGELRQLKAMKRRQRFEQPRQRK 730
Score = 229 (85.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 49/143 (34%), Positives = 81/143 (56%)
Query: 653 TEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
TEK ++ + +T+++LPI F++DL +A+ +V+I+ G+TG GK+TQ+PQYL++ G+
Sbjct: 130 TEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYR 189
Query: 713 KDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLH 772
I CTQP E+ G V + IRFE ++ T I ++T+G L
Sbjct: 190 S----IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLL 245
Query: 773 REFLSEPDLASYSVMIIDEAHPK 795
R+ +L Y +I+DE H +
Sbjct: 246 RQLAVAANLDQYDALILDEIHER 268
Score = 210 (79.0 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 57/179 (31%), Positives = 96/179 (53%)
Query: 70 DDAPVFRIPGRRFPVDIYYTKAP--------------EADYIDAC----VVSIL-QIHAT 110
+ A + ++PGR FP+ + Y P + + ID V+S++ Q + T
Sbjct: 310 EGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPT 369
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPP 170
GD+L+F++G EIE+ E V ++ ++LP++S Q+K+F P
Sbjct: 370 SERGDVLIFVSGVNEIESVVEA----VHEYATEQTHWLVLPLHSGQAIADQSKVFDYAPE 425
Query: 171 NARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK +++TNIAETSLT+D + +V+D G K+ NF++ + L +SK+SA+QR G
Sbjct: 426 GMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKG 484
Score = 174 (66.3 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 35/94 (37%), Positives = 56/94 (59%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T+G L R+ +L Y +I+DE HER L D L G+ K ++R R LKL++ SAT+
Sbjct: 239 ITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATI 298
Query: 61 DAQKFSEFFDD--APVFRIPGRRFPVDIYYTKAP 92
+ + F +F + A + ++PGR FP+ + Y P
Sbjct: 299 NVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPP 332
Score = 63 (27.2 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 17/97 (17%), Positives = 40/97 (41%)
Query: 1152 GDHLVLLNIYNQWADA----DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS 1207
GD L+ +YN W D + QWC I+ + +R+Q +++ M + S
Sbjct: 634 GDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVAS 693
Query: 1208 NP-TETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQ 1243
+ ++ + +A G + + + ++ + +
Sbjct: 694 DSDSQLTSAERATRHGELRQLKAMKRRQRFEQPRQRK 730
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 298 (110.0 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 83/265 (31%), Positives = 131/265 (49%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A S+ I D VYVID G K+ +++ GMESL +S+A+A Q
Sbjct: 866 NIAETSITIDDV----VYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVA 921
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI---NDLIH-FDFLDPPPH 895
CF L+T+ Y H+L +PEIQR+ L L +K L + ++L F L PPH
Sbjct: 922 SGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPH 981
Query: 896 -ETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
++L + +L LGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 982 VDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1041
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA-----DADFSTQWCYE 1009
L+ F P DK A+ + F D+L LL Y W A S +C +
Sbjct: 1042 SLAFKSP-FVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQ 1100
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRV 1034
NF+ R+++ ++ Q L+ +
Sbjct: 1101 NFLSGRTLQEMASLKRQFTELLSDI 1125
Score = 224 (83.9 bits), Expect = 7.4e-30, Sum P(4) = 7.4e-30
Identities = 51/135 (37%), Positives = 81/135 (60%)
Query: 95 DYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYS 154
+ I+A + I+ + P G ILVFL G EI+ E LQ + +I P++S
Sbjct: 781 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 840
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
+L ++ Q +F+ P K++++TNIAETS+TID+++YVID G K+ +++ GMESL
Sbjct: 841 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 900
Query: 215 TVVPISKASANQRAG 229
+S+A+A QR G
Sbjct: 901 EDTFVSQANALQRKG 915
Score = 194 (73.4 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 651 EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAG 710
+M + ++ I + ++ LP + ++ ++ + HQV++I G TG GKTTQIPQ++ +
Sbjct: 477 QMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNS 536
Query: 711 FTKDKMKIG---CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
++ CTQP +E ++G VGY IR E S T + Y T
Sbjct: 537 LNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT 596
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPK 795
G L R + L + +I+DE H +
Sbjct: 597 TGVLLRRLEGDATLQGVTHIIVDEVHER 624
Score = 187 (70.9 bits), Expect = 9.5e-37, Sum P(3) = 9.5e-37
Identities = 39/87 (44%), Positives = 55/87 (63%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R + L + +I+DE HERT +D L ++KDIV R+ L++++ SATLD
Sbjct: 596 TTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLD 655
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A FS++F PV IPGR FPVD ++
Sbjct: 656 AGLFSKYFSYCPVITIPGRAFPVDQFF 682
Score = 60 (26.2 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1065 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1113
KS K K++ V IHP+S ++ + P ++LYHE + T++ F+R + +
Sbjct: 1200 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMV 1252
Score = 60 (26.2 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1232 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1280
KS K K++ V IHP+S ++ + P ++LYHE + T++ F+R + +
Sbjct: 1200 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMV 1252
Score = 58 (25.5 bits), Expect = 7.4e-30, Sum P(4) = 7.4e-30
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWA-----DADFSTQWCYENFIQHRSMKR 1186
E++ KK+ S D+L LL Y W A S +C +NF+ R+++
Sbjct: 1057 EEANQKKLEFAFANS------DYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQE 1110
Query: 1187 ARDVREQLIGLVQRV 1201
++ Q L+ +
Sbjct: 1111 MASLKRQFTELLSDI 1125
Score = 38 (18.4 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 248 GEEVLRGCAHVLGEEV 263
G+ L+G H++ +EV
Sbjct: 606 GDATLQGVTHIIVDEV 621
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 287 (106.1 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 81/265 (30%), Positives = 129/265 (48%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A S+ I D VYVID G K+ +++ GMESL +S+A+A Q
Sbjct: 910 NIAETSITIDDV----VYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVA 965
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI---NDLIH-FDFLDPPPH 895
CF L+T+ + H+L +PEIQR+ L L +K L + ++L F L PPH
Sbjct: 966 SGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPH 1025
Query: 896 -ETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
++L + +L LGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 1026 TDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAA 1085
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA-----DADFSTQWCYE 1009
L+ F P DK A+ + F D+L LL Y W S +C +
Sbjct: 1086 SLAFKSP-FVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYNYCRQ 1144
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRV 1034
NF+ R ++ ++ Q L+ +
Sbjct: 1145 NFLSGRVLQEMASLKRQFTELLSDI 1169
Score = 225 (84.3 bits), Expect = 1.7e-29, Sum P(4) = 1.7e-29
Identities = 50/135 (37%), Positives = 81/135 (60%)
Query: 95 DYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYS 154
+ I+A + I+ + P G ILVFL G EI+ E LQ + ++ P++S
Sbjct: 825 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHS 884
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
+L ++ Q +F+ P K++++TNIAETS+TID+++YVID G K+ +++ GMESL
Sbjct: 885 SLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 944
Query: 215 TVVPISKASANQRAG 229
+S+A+A QR G
Sbjct: 945 EDTFVSQANALQRKG 959
Score = 209 (78.6 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 51/164 (31%), Positives = 81/164 (49%)
Query: 637 QALSLPGNRDKGEEEMTEKQKKKL--NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
QA S+ K ++ KQ + +I + ++SLP + ++ ++ + +HQVL+I G T
Sbjct: 506 QAKSVYAENAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMT 565
Query: 695 GSGKTTQIPQYLHEAGFTKDKMKIG---CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAI 751
G GKTTQIPQ++ + + K+ CTQP +E ++G VGY I
Sbjct: 566 GCGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERTERVGLTVGYQI 625
Query: 752 RFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
R E S T + Y T G L R + L + +I+DE H +
Sbjct: 626 RLESVKSSATRLLYCTTGVLLRRLEGDTSLQGVTHIIVDEVHER 669
Score = 193 (73.0 bits), Expect = 1.0e-35, Sum P(3) = 1.0e-35
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R + L + +I+DE HERT +D L ++KDIV R +L++++ SATL+
Sbjct: 641 TTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLN 700
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A+ FSE+F PV IPGR FPVD ++
Sbjct: 701 AELFSEYFSSCPVITIPGRTFPVDQFF 727
Score = 56 (24.8 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 1065 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1113
KS K K++ V IHP+S ++ + P +++YHE + T++ F+R + +
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLVYHEKIKTSRVFIRDCSMV 1296
Score = 56 (24.8 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 1232 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1280
KS K K++ V IHP+S ++ + P +++YHE + T++ F+R + +
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLVYHEKIKTSRVFIRDCSMV 1296
Score = 52 (23.4 bits), Expect = 1.7e-29, Sum P(4) = 1.7e-29
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWA-----DADFSTQWCYENFIQHRSMKR 1186
E++ KK+ S D+L LL Y W S +C +NF+ R ++
Sbjct: 1101 EEANQKKLEFAFANS------DYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQE 1154
Query: 1187 ARDVREQLIGLVQRV 1201
++ Q L+ +
Sbjct: 1155 MASLKRQFTELLSDI 1169
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 284 (105.0 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 78/246 (31%), Positives = 125/246 (50%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFRLYT ++
Sbjct: 942 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGF 1001
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
L D +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1002 L-DYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEP 1060
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C+E + T+A++++ F P +
Sbjct: 1061 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSP-FITPIGRKDE 1119
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARDVREQ 1026
AD A+ + + DHL + N Y W A F ++ +C NF+ S+ DV+++
Sbjct: 1120 ADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQE 1179
Query: 1027 LIGLVQ 1032
L+ LV+
Sbjct: 1180 LMKLVK 1185
Score = 210 (79.0 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 61/213 (28%), Positives = 106/213 (49%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSL-PGNRD-----KGEEE 651
+Q++ + +Q + G++D E E +E L+ ++ D + ALSL P + + +
Sbjct: 498 KQQQQQQQQQRPESEKGGSEDPE--ESWENLVSDE-D-LAALSLEPTSAEDLAPVRSLFR 553
Query: 652 MTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF 711
+ K + + ++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E
Sbjct: 554 RLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 613
Query: 712 TKD----KMKIGCTQPXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTI 762
+ K I CTQP EE+G + G GY IR E SE T
Sbjct: 614 LDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTR 673
Query: 763 IKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
+ Y T G L R+ + LA S +I+DE H +
Sbjct: 674 LLYCTTGVLLRKLQEDGLLADVSHVIVDEVHER 706
Score = 206 (77.6 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 49/116 (42%), Positives = 70/116 (60%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G +L+FL G I+ ++L RR S+ ++I L +S L T Q F+ PP R
Sbjct: 867 GAVLIFLPGLAHIQQLYDLLSSD-RRFYSERYQVIAL--HSVLSTQDQAAAFMFPPPGVR 923
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
K+VLATNIAET +TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 924 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 979
Score = 198 (74.8 bits), Expect = 6.2e-36, Sum P(3) = 6.2e-36
Identities = 37/87 (42%), Positives = 60/87 (68%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + LA S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 678 TTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVD 737
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
+ KFS +F P+ RI GR +PV++++
Sbjct: 738 SDKFSTYFTHCPILRISGRSYPVEVFH 764
Score = 78 (32.5 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 1137 KKMPKTLGKSR-AELGGDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARD 1189
+K L KS A DHL + N Y W A F ++ +C NF+ S+ D
Sbjct: 1116 RKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLED 1175
Query: 1190 VREQLIGLVQ 1199
V+++L+ LV+
Sbjct: 1176 VKQELMKLVK 1185
Score = 56 (24.8 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 1080 IHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEI 1113
+HP SS+ +L W+LY E V T+ ++R+ T I
Sbjct: 1252 VHP-SSVNRDLQTYGWLLYQEKVRYTRVYLRETTLI 1286
Score = 56 (24.8 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 1247 IHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEI 1280
+HP SS+ +L W+LY E V T+ ++R+ T I
Sbjct: 1252 VHP-SSVNRDLQTYGWLLYQEKVRYTRVYLRETTLI 1286
Score = 47 (21.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 19/95 (20%), Positives = 40/95 (42%)
Query: 198 GFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDFRGCAHVLGEEVLRGCAH 257
GF ++ R G ++L+ I+ A AG+ + + + E++
Sbjct: 1188 GFSSSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMCTKSVD--VTEKLACMVET 1245
Query: 258 VLGEEVLRPE-VSQPFRSFGYLGVMQDCRYIGTYL 291
G+ + P V++ +++G+L + RY YL
Sbjct: 1246 AQGKAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYL 1280
Score = 42 (19.8 bits), Expect = 8.4e-20, Sum P(3) = 8.4e-20
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 628 LLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIY 672
LLD + + A L N+ +G++E EK +K ET + PI+
Sbjct: 269 LLDAK-EQAAAFKLEKNK-QGQKEAQEKIRKFQREMETLEDHPIF 311
Score = 40 (19.1 bits), Expect = 9.1e-27, Sum P(4) = 9.1e-27
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 778 EPDLASYSVMIIDEAHPKVY 797
E DLA S+ + D H +Y
Sbjct: 1119 EADLAKSSLAVADSDHLTIY 1138
Score = 39 (18.8 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 654 EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
EK++++LN ET K ++ K L++ ++ Q
Sbjct: 471 EKKREELNKMETNKPRDLFIAK--LLNKLKQQQ 501
Score = 37 (18.1 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 364 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 393
>UNIPROTKB|Q8EJ41 [details] [associations]
symbol:hrpB "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 344 (126.2 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 90/234 (38%), Positives = 130/234 (55%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVR-FRSDLKLLISSAT 59
+T+G L R +P+L ++I DE HER L TD+ L ++ R DLK+L SAT
Sbjct: 99 VTEGILTRMIQQDPELTGIDMIIFDEIHERHLTTDLGLALALEVQSSLRDDLKILAMSAT 158
Query: 60 LDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHAT-QPLG--D 115
L SE A + + GR FPV+I Y A + ++D ++L A+ G D
Sbjct: 159 LSGLALSELMPYAALLKSEGRTFPVEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQD 218
Query: 116 ILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKV 175
ILVFL G+ EI + L +R+ GS++ I P+Y L Q + RK+
Sbjct: 219 ILVFLPGKAEILRVAQYLAERLD--GSRVA---ICPLYGELSAQEQDRAIKADASGRRKI 273
Query: 176 VLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
VL+TN+AE+SLTI+ I VID G+ +Q +FN +TG+ L++ IS+ASA QRAG
Sbjct: 274 VLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAG 327
Score = 142 (55.0 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 44/160 (27%), Positives = 72/160 (45%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
VID G+ +Q +FN +TG+ L++ IS+ASA Q C RL+ ++ L+
Sbjct: 292 VIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGVCIRLWGQEEHQRLLK 351
Query: 858 DNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGDL 917
+ PEI + +L + G L PP LA + L L ++ L
Sbjct: 352 ADE-PEISQADLVSMAHDCAYWGAKSFSDLLLLTAPPSVNEALAWQLLRRLDVVDGQNKL 410
Query: 918 TKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLS 957
T G+ E P + MLLA++ + E+ +A +L+
Sbjct: 411 TAHGKAAYELGCHPRLAHMLLAAKSHST--ELAALACLLA 448
Score = 140 (54.3 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 38/135 (28%), Positives = 61/135 (45%)
Query: 668 SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXX 727
+LPI+ L DA H +I+E TG+GK+T +P L + + +I +P
Sbjct: 3 NLPIHSLLPSLRDAFATHAQVILEAPTGAGKSTALP--LAMLDWAEISGRILMLEPRRVA 60
Query: 728 XXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVM 787
+G EVG+ +R E S T ++ +T+G L R +P+L ++
Sbjct: 61 ARSVAQFIASCRQQAVGQEVGFRVRGEAKVSRDTRLEIVTEGILTRMIQQDPELTGIDMI 120
Query: 788 IIDEAHPKVYVIDPG 802
I DE H + D G
Sbjct: 121 IFDEIHERHLTTDLG 135
>TIGR_CMR|SO_0632 [details] [associations]
symbol:SO_0632 "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 344 (126.2 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 90/234 (38%), Positives = 130/234 (55%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVR-FRSDLKLLISSAT 59
+T+G L R +P+L ++I DE HER L TD+ L ++ R DLK+L SAT
Sbjct: 99 VTEGILTRMIQQDPELTGIDMIIFDEIHERHLTTDLGLALALEVQSSLRDDLKILAMSAT 158
Query: 60 LDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK-APEADYIDACVVSILQIHAT-QPLG--D 115
L SE A + + GR FPV+I Y A + ++D ++L A+ G D
Sbjct: 159 LSGLALSELMPYAALLKSEGRTFPVEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQD 218
Query: 116 ILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKV 175
ILVFL G+ EI + L +R+ GS++ I P+Y L Q + RK+
Sbjct: 219 ILVFLPGKAEILRVAQYLAERLD--GSRVA---ICPLYGELSAQEQDRAIKADASGRRKI 273
Query: 176 VLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
VL+TN+AE+SLTI+ I VID G+ +Q +FN +TG+ L++ IS+ASA QRAG
Sbjct: 274 VLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAG 327
Score = 142 (55.0 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 44/160 (27%), Positives = 72/160 (45%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
VID G+ +Q +FN +TG+ L++ IS+ASA Q C RL+ ++ L+
Sbjct: 292 VIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGVCIRLWGQEEHQRLLK 351
Query: 858 DNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGDL 917
+ PEI + +L + G L PP LA + L L ++ L
Sbjct: 352 ADE-PEISQADLVSMAHDCAYWGAKSFSDLLLLTAPPSVNEALAWQLLRRLDVVDGQNKL 410
Query: 918 TKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLS 957
T G+ E P + MLLA++ + E+ +A +L+
Sbjct: 411 TAHGKAAYELGCHPRLAHMLLAAKSHST--ELAALACLLA 448
Score = 140 (54.3 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 38/135 (28%), Positives = 61/135 (45%)
Query: 668 SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXX 727
+LPI+ L DA H +I+E TG+GK+T +P L + + +I +P
Sbjct: 3 NLPIHSLLPSLRDAFATHAQVILEAPTGAGKSTALP--LAMLDWAEISGRILMLEPRRVA 60
Query: 728 XXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVM 787
+G EVG+ +R E S T ++ +T+G L R +P+L ++
Sbjct: 61 ARSVAQFIASCRQQAVGQEVGFRVRGEAKVSRDTRLEIVTEGILTRMIQQDPELTGIDMI 120
Query: 788 IIDEAHPKVYVIDPG 802
I DE H + D G
Sbjct: 121 IFDEIHERHLTTDLG 135
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 243 (90.6 bits), Expect = 8.3e-37, Sum P(2) = 8.3e-37
Identities = 49/134 (36%), Positives = 75/134 (55%)
Query: 662 IEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCT 721
++ + +LPI + ++ +++HQV+++ G+TG GK+TQ+PQYL AGF+ + CT
Sbjct: 155 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACT 210
Query: 722 QPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL 781
QP E + G +VGY IRFE S T I ++T G L R+ EP L
Sbjct: 211 QPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSL 270
Query: 782 ASYSVMIIDEAHPK 795
Y V+I+DE H +
Sbjct: 271 PQYEVLIVDEVHER 284
Score = 241 (89.9 bits), Expect = 8.3e-37, Sum P(2) = 8.3e-37
Identities = 56/162 (34%), Positives = 89/162 (54%)
Query: 797 YVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHEL 856
+V+D G K+ +++ + ++ L IS+ASA Q CFRLY Y
Sbjct: 369 FVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYD-AF 427
Query: 857 EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD 916
VPEI+R+ L + VL +K++ + D F F++PPP +L A+ L GAL+
Sbjct: 428 APYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEA 487
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
LT +G +A+ P+D ++GKML+ + VE ++TIA+ LSV
Sbjct: 488 LTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSV 529
Score = 225 (84.3 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 48/140 (34%), Positives = 81/140 (57%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+T G L R+ EP L Y V+I+DE HER LH D L G+++ ++ R DLK+++ SAT+
Sbjct: 255 LTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATI 314
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
+ FS +F +APV ++PGR FP+ ++ P + C++S I T D + F+
Sbjct: 315 NISLFSSYFSNAPVVQVPGRLFPITVFDVAPPG---VRKCILST-NIAETSVTIDGIRFV 370
Query: 121 TGQEEIETCNEILQDRVRRL 140
+++ + Q +++RL
Sbjct: 371 VDSGKVKEMSYDPQAKLQRL 390
Score = 144 (55.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 164 IFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 223
+F PP RK +L+TNIAETS+TID I +V+D G K+ +++ + ++ L IS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 224 ANQRAG 229
A QR G
Sbjct: 400 AEQRKG 405
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 298 (110.0 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 83/265 (31%), Positives = 131/265 (49%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A S+ I D VYVID G K+ +++ GMESL +S+A+A Q
Sbjct: 916 NIAETSITIDDV----VYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVA 971
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI---NDLIH-FDFLDPPPH 895
CF L+T+ Y H+L +PEIQR+ L L +K L + ++L F L PPH
Sbjct: 972 SGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPH 1031
Query: 896 -ETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
++L + +L LGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 1032 IDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1091
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA-----DADFSTQWCYE 1009
L+ F P DK A+ + F D+L LL Y W A S +C +
Sbjct: 1092 SLAFKSP-FVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQ 1150
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRV 1034
NF+ R+++ ++ Q L+ +
Sbjct: 1151 NFLSGRTLQEMASLKRQFTELLSDI 1175
Score = 223 (83.6 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 49/122 (40%), Positives = 75/122 (61%)
Query: 108 HATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLP 167
HA P G +LVFL G EI+ E LQ + +I P++S+L ++ Q +F+
Sbjct: 845 HAYPP-GAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVK 903
Query: 168 TPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQR 227
P K++++TNIAETS+TID+++YVID G K+ +++ GMESL +S+A+A QR
Sbjct: 904 PPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQR 963
Query: 228 AG 229
G
Sbjct: 964 KG 965
Score = 194 (73.4 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 651 EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAG 710
+M + ++ I + ++ LP + ++ ++ + HQV++I G TG GKTTQIPQ++ +
Sbjct: 527 QMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNS 586
Query: 711 FTKDKMKIG---CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
++ CTQP +E ++G VGY IR E S T + Y T
Sbjct: 587 LNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT 646
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPK 795
G L R + L + +I+DE H +
Sbjct: 647 TGVLLRRLEGDATLQGVTHIIVDEVHER 674
Score = 187 (70.9 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 39/87 (44%), Positives = 55/87 (63%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R + L + +I+DE HERT +D L ++KDIV R+ L++++ SATLD
Sbjct: 646 TTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLD 705
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A FS++F PV IPGR FPVD ++
Sbjct: 706 AGLFSKYFSYCPVITIPGRAFPVDQFF 732
Score = 60 (26.2 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1065 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1113
KS K K++ V IHP+S ++ + P ++LYHE + T++ F+R + +
Sbjct: 1250 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMV 1302
Score = 60 (26.2 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1232 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1280
KS K K++ V IHP+S ++ + P ++LYHE + T++ F+R + +
Sbjct: 1250 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMV 1302
Score = 58 (25.5 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWA-----DADFSTQWCYENFIQHRSMKR 1186
E++ KK+ S D+L LL Y W A S +C +NF+ R+++
Sbjct: 1107 EEANQKKLEFAFANS------DYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQE 1160
Query: 1187 ARDVREQLIGLVQRV 1201
++ Q L+ +
Sbjct: 1161 MASLKRQFTELLSDI 1175
Score = 38 (18.4 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 248 GEEVLRGCAHVLGEEV 263
G+ L+G H++ +EV
Sbjct: 656 GDATLQGVTHIIVDEV 671
Score = 37 (18.1 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 496 SRDKIIPKLRIESRRKYLEKRKEDKVAELEADI 528
+R K PK ++ + ++ ++KV L D+
Sbjct: 87 TRPKWKPKAKVPLQTLHMTSENQEKVKALLRDL 119
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 298 (110.0 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 83/265 (31%), Positives = 131/265 (49%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A S+ I D VYVID G K+ +++ GMESL +S+A+A Q
Sbjct: 919 NIAETSITIDDV----VYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVA 974
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI---NDLIH-FDFLDPPPH 895
CF L+T+ Y H+L +PEIQR+ L L +K L + ++L F L PPH
Sbjct: 975 SGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPH 1034
Query: 896 -ETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
++L + +L LGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 1035 VDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1094
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA-----DADFSTQWCYE 1009
L+ F P DK A+ + F D+L LL Y W A S +C +
Sbjct: 1095 SLAFKSP-FVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQ 1153
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRV 1034
NF+ R+++ ++ Q L+ +
Sbjct: 1154 NFLSGRTLQEMASLKRQFTELLSDI 1178
Score = 224 (83.9 bits), Expect = 9.0e-30, Sum P(4) = 9.0e-30
Identities = 51/135 (37%), Positives = 81/135 (60%)
Query: 95 DYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYS 154
+ I+A + I+ + P G ILVFL G EI+ E LQ + +I P++S
Sbjct: 834 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 893
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
+L ++ Q +F+ P K++++TNIAETS+TID+++YVID G K+ +++ GMESL
Sbjct: 894 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 953
Query: 215 TVVPISKASANQRAG 229
+S+A+A QR G
Sbjct: 954 EDTFVSQANALQRKG 968
Score = 194 (73.4 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 651 EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAG 710
+M + ++ I + ++ LP + ++ ++ + HQV++I G TG GKTTQIPQ++ +
Sbjct: 530 QMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNS 589
Query: 711 FTKDKMKIG---CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
++ CTQP +E ++G VGY IR E S T + Y T
Sbjct: 590 LNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT 649
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPK 795
G L R + L + +I+DE H +
Sbjct: 650 TGVLLRRLEGDATLQGVTHIIVDEVHER 677
Score = 187 (70.9 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 39/87 (44%), Positives = 55/87 (63%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R + L + +I+DE HERT +D L ++KDIV R+ L++++ SATLD
Sbjct: 649 TTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLD 708
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A FS++F PV IPGR FPVD ++
Sbjct: 709 AGLFSKYFSYCPVITIPGRAFPVDQFF 735
Score = 60 (26.2 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1065 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1113
KS K K++ V IHP+S ++ + P ++LYHE + T++ F+R + +
Sbjct: 1253 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMV 1305
Score = 60 (26.2 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1232 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1280
KS K K++ V IHP+S ++ + P ++LYHE + T++ F+R + +
Sbjct: 1253 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMV 1305
Score = 58 (25.5 bits), Expect = 9.0e-30, Sum P(4) = 9.0e-30
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWA-----DADFSTQWCYENFIQHRSMKR 1186
E++ KK+ S D+L LL Y W A S +C +NF+ R+++
Sbjct: 1110 EEANQKKLEFAFANS------DYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQE 1163
Query: 1187 ARDVREQLIGLVQRV 1201
++ Q L+ +
Sbjct: 1164 MASLKRQFTELLSDI 1178
Score = 38 (18.4 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 248 GEEVLRGCAHVLGEEV 263
G+ L+G H++ +EV
Sbjct: 659 GDATLQGVTHIIVDEV 674
Score = 37 (18.1 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 496 SRDKIIPKLRIESRRKYLEKRKEDKVAELEADI 528
+R K PK ++ + ++ ++KV L D+
Sbjct: 90 TRPKWKPKAKVPLQTLHMTSENQEKVKALLRDL 122
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 270 (100.1 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 84/283 (29%), Positives = 142/283 (50%)
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGME 816
+ ++ ++K G R+ + ++A S+ + D V+VID G K+ +F++ +
Sbjct: 667 SDQKKVLKNPPAGV--RKIILSTNIAETSITVNDV----VFVIDSGKVKEKSFDALNFVT 720
Query: 817 SLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 876
L +V ISKASA Q CFRL++ +++ LE T PE+ R+ L L
Sbjct: 721 MLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHT 779
Query: 877 KALG-INDLIHFDFL----DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDP 931
K L +N I DFL +PPP + A++ L + A++ DLT+LG +A+ P++P
Sbjct: 780 KLLAPVNCPIA-DFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEP 838
Query: 932 MMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLG--GDHLV 989
+GKM+L + KC++ I+TIA L+ + A + F G DH+
Sbjct: 839 HLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMA 898
Query: 990 LLNIYNQW--ADAD-FSTQWCYENFIQHRSMKRARDVREQLIG 1029
LL + W A +D + +C +NF+ +M+ +R QL+G
Sbjct: 899 LLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLG 941
Score = 220 (82.5 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 46/155 (29%), Positives = 88/155 (56%)
Query: 643 GNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQI 702
G + G ++ K+ + + ++SLP++ +++++ +++++V++I GETGSGKTTQI
Sbjct: 167 GRLNNGIPQIPVKRGES-EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQI 225
Query: 703 PQYLHEAGFTKD-KMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERT 761
PQ+L + F +I CTQP E ++G +GY IR E S +T
Sbjct: 226 PQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKT 285
Query: 762 IIKYMTDGTLHREFLS-EPDLASYSVMIIDEAHPK 795
++ + T+G L R ++ + L++ + +I+DE H +
Sbjct: 286 LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHER 320
Score = 200 (75.5 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 46/117 (39%), Positives = 71/117 (60%)
Query: 114 GDILVFLTGQEEIETCNE-ILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA 172
G IL+FL G +EI + IL D +R + ++SN+ T Q K+ P
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDD-KRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGV 680
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK++L+TNIAETS+T++++++VID G K+ +F++ + L +V ISKASA QR G
Sbjct: 681 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKG 737
Score = 141 (54.7 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 2 TDGTLHREFLS-EPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
T+G L R ++ + L++ + +I+DE HER +D L ++D+++ LKL++SSA L
Sbjct: 291 TNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAAL 350
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPV 84
D F +F PV I GR F V
Sbjct: 351 DVNLFIRYFGSCPVIYIQGRPFEV 374
Score = 77 (32.2 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 1125 YYKPRELEDSTNKKMPKTLGKSRAELG--GDHLVLLNIYNQW--ADAD-FSTQWCYENFI 1179
Y P L ++K L + R G DH+ LL + W A +D + +C +NF+
Sbjct: 865 YRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFL 924
Query: 1180 QHRSMKRARDVREQLIG 1196
+M+ +R QL+G
Sbjct: 925 SQATMEIIIGMRTQLLG 941
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 280 (103.6 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 83/277 (29%), Positives = 135/277 (48%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFR+YT ++
Sbjct: 940 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGF 999
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
+ D +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1000 M-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEL 1058
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C++ + T+A++++ F P +
Sbjct: 1059 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSP-FITPIGRKDE 1117
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADA----DFSTQ--WCYENFIQHRSMKRARDVREQ 1026
AD A+ M DHL + N Y W A + ++ +C +NF+ S+ DV+++
Sbjct: 1118 ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQE 1177
Query: 1027 LIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKL 1063
LI LV+ L S + + +A F IA L
Sbjct: 1178 LIKLVKAAGF-LSSTTSNSFEGNRATQTLSFQEIALL 1213
Score = 210 (79.0 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 60/212 (28%), Positives = 105/212 (49%)
Query: 599 QRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMT----- 653
+++ + +Q S R ++D E E +E L+ ++ DF ALSL + + E +
Sbjct: 497 KQQQQQQQQHSENKRENSEDPE--ESWENLVSDE-DF-SALSLESEKVEDLEPVRNLFRK 552
Query: 654 -EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
+ K + + ++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E
Sbjct: 553 LQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLL 612
Query: 713 KD----KMKIGCTQPXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTII 763
+ K I CTQP +E+G + G GY IR E SE T +
Sbjct: 613 NEWGTTKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRL 672
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y T G L R+ + L + S +I+DE H +
Sbjct: 673 LYCTTGVLLRKLQEDGLLTNVSHVIVDEVHER 704
Score = 196 (74.1 bits), Expect = 3.4e-35, Sum P(3) = 3.4e-35
Identities = 66/223 (29%), Positives = 109/223 (48%)
Query: 10 FLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLI-SSATLDA--QKFS 66
F+ E D + Y ++E E T++ G +K +++ + + +SA L+ QK+S
Sbjct: 772 FVLEKD-SEYCQKFLEEEEEITINVTTKAGGIK---KYQEYIPVQTGTSADLNPFYQKYS 827
Query: 67 EFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
A ++ P + +D+ Y+D Q + G +L+FL G I
Sbjct: 828 SRTQHAILYMNP-HKINLDLILELLT---YLDRSP----QFKNVE--GAVLIFLPGLAHI 877
Query: 127 ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSL 186
+ ++L R + K ++ ++S L T Q F P RK+VLATNIAET +
Sbjct: 878 QQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGI 934
Query: 187 TIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 935 TIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 977
Score = 195 (73.7 bits), Expect = 4.4e-35, Sum P(3) = 4.4e-35
Identities = 36/87 (41%), Positives = 60/87 (68%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + L + S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVD 735
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
+KFS +F P+ RI GR +PV++++
Sbjct: 736 CEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 80 (33.2 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 1137 KKMPKTLGKSRAELG-GDHLVLLNIYNQWADA----DFSTQ--WCYENFIQHRSMKRARD 1189
+K L KS + DHL + N Y W A + ++ +C +NF+ S+ D
Sbjct: 1114 RKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLED 1173
Query: 1190 VREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKL 1230
V+++LI LV+ L S + + +A F IA L
Sbjct: 1174 VKQELIKLVKAAGF-LSSTTSNSFEGNRATQTLSFQEIALL 1213
Score = 55 (24.4 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 1044 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFE-ELPRWV 1094
E ++ +TAG + ++ K+ +KS K A +T +HP+S + ++ W+
Sbjct: 1209 EIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVETAQGKAQVHPSSVNRDLQIYGWL 1268
Query: 1095 LYHELVFTTKEFMRQVTEI 1113
LY E + + ++R+ T I
Sbjct: 1269 LYQEKIRYARVYLRETTLI 1287
Score = 55 (24.4 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 1211 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFE-ELPRWV 1261
E ++ +TAG + ++ K+ +KS K A +T +HP+S + ++ W+
Sbjct: 1209 EIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVETAQGKAQVHPSSVNRDLQIYGWL 1268
Query: 1262 LYHELVFTTKEFMRQVTEI 1280
LY E + + ++R+ T I
Sbjct: 1269 LYQEKIRYARVYLRETTLI 1287
Score = 43 (20.2 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 636 IQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
+ L P RD E EK+K++LN ET K ++ K L++ ++ Q
Sbjct: 451 VHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAK--LLNKLKQQQ 500
Score = 37 (18.1 bits), Expect = 9.2e-19, Sum P(3) = 9.2e-19
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 363 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 392
Score = 37 (18.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 260 GEEVLRPE-VSQPFRSFGYLGVMQDCRYIGTYL 291
G+ + P V++ + +G+L + RY YL
Sbjct: 1249 GKAQVHPSSVNRDLQIYGWLLYQEKIRYARVYL 1281
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 272 (100.8 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 75/246 (30%), Positives = 124/246 (50%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFR+YT ++
Sbjct: 940 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGF 999
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
+ D +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1000 M-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEL 1058
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C++ + T+A++++ F P +
Sbjct: 1059 NEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSP-FTTPIGRKDE 1117
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADA----DFSTQ--WCYENFIQHRSMKRARDVREQ 1026
AD A+ M DHL + N Y W A + ++ +C NF+ S+ DV+++
Sbjct: 1118 ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQE 1177
Query: 1027 LIGLVQ 1032
L+ LV+
Sbjct: 1178 LMKLVK 1183
Score = 212 (79.7 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 60/212 (28%), Positives = 105/212 (49%)
Query: 599 QRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMT----- 653
+++ + +Q S R ++D E E +E L+ ++ DF ALSL + + E +
Sbjct: 497 KQQQQQQQQHSENKRENSEDPE--ESWENLVSDE-DF-SALSLESEKAEDLEPVRNLFRK 552
Query: 654 -EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
+ K + + ++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E
Sbjct: 553 LQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLL 612
Query: 713 KD----KMKIGCTQPXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTII 763
+ K I CTQP +E+G + G GY IR E SE T +
Sbjct: 613 NEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRL 672
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y T G L R+ + L + S +I+DE H +
Sbjct: 673 LYCTTGVLLRKLQEDGLLTNVSHVIVDEVHER 704
Score = 203 (76.5 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 46/116 (39%), Positives = 67/116 (57%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G +L+FL G I+ ++L R + K ++ ++S L T Q F PP R
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPPGVR 921
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
K+VLATNIAET +TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 922 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 977
Score = 196 (74.1 bits), Expect = 6.0e-35, Sum P(3) = 6.0e-35
Identities = 36/87 (41%), Positives = 61/87 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + L + S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVD 735
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
++KFS +F P+ RI GR +PV++++
Sbjct: 736 SEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 73 (30.8 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 1137 KKMPKTLGKSRAELG-GDHLVLLNIYNQWADA----DFSTQ--WCYENFIQHRSMKRARD 1189
+K L KS + DHL + N Y W A + ++ +C NF+ S+ D
Sbjct: 1114 RKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLED 1173
Query: 1190 VREQLIGLVQ 1199
V+++L+ LV+
Sbjct: 1174 VKQELMKLVK 1183
Score = 61 (26.5 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 1042 PTETVNIRKAI-TAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR 1092
P + + + KA+ AG + ++ K+ +KS K A +T +HP SS+ +L
Sbjct: 1206 PFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQT 1264
Query: 1093 --WVLYHELVFTTKEFMRQVTEI 1113
W+LY E V T+ ++R+ T I
Sbjct: 1265 YGWLLYQEKVRYTRVYLRETTLI 1287
Score = 61 (26.5 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 1209 PTETVNIRKAI-TAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR 1259
P + + + KA+ AG + ++ K+ +KS K A +T +HP SS+ +L
Sbjct: 1206 PFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQT 1264
Query: 1260 --WVLYHELVFTTKEFMRQVTEI 1280
W+LY E V T+ ++R+ T I
Sbjct: 1265 YGWLLYQEKVRYTRVYLRETTLI 1287
Score = 43 (20.2 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 636 IQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
+ L P RD E EK+K++LN ET K ++ K L++ ++ Q
Sbjct: 451 VHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAK--LLNKLKQQQ 500
Score = 43 (20.2 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 597 YEQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFI-QALSLPGNRDK-GEEEMTE 654
Y +++ E+E+ ++ + + E+Y L +D QA + ++K G++E E
Sbjct: 233 YAEQQNEEEKSENSKSLEEEEKFDPNERYLHLAAKLLDAKEQAATFKLEKNKQGQKEAQE 292
Query: 655 KQKKKLNIEETKKSLPIY 672
K +K ET + P++
Sbjct: 293 KIRKFQREMETLEDHPVF 310
Score = 40 (19.1 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 260 GEEVLRPE-VSQPFRSFGYLGVMQDCRYIGTYL 291
G+ + P V++ +++G+L + RY YL
Sbjct: 1249 GKAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYL 1281
Score = 37 (18.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 363 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 392
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 272 (100.8 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 75/246 (30%), Positives = 124/246 (50%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFR+YT ++
Sbjct: 943 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGF 1002
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
+ D +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1003 M-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEL 1061
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C++ + T+A++++ F P +
Sbjct: 1062 NEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSP-FTTPIGRKDE 1120
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADA----DFSTQ--WCYENFIQHRSMKRARDVREQ 1026
AD A+ M DHL + N Y W A + ++ +C NF+ S+ DV+++
Sbjct: 1121 ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQE 1180
Query: 1027 LIGLVQ 1032
L+ LV+
Sbjct: 1181 LMKLVK 1186
Score = 212 (79.7 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 60/212 (28%), Positives = 105/212 (49%)
Query: 599 QRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMT----- 653
+++ + +Q S R ++D E E +E L+ ++ DF ALSL + + E +
Sbjct: 497 KQQQQQQQQHSENKRENSEDPE--ESWENLVSDE-DF-SALSLESEKAEDLEPVRNLFRK 552
Query: 654 -EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
+ K + + ++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E
Sbjct: 553 LQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLL 612
Query: 713 KD----KMKIGCTQPXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTII 763
+ K I CTQP +E+G + G GY IR E SE T +
Sbjct: 613 NEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRL 672
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y T G L R+ + L + S +I+DE H +
Sbjct: 673 LYCTTGVLLRKLQEDGLLTNVSHVIVDEVHER 704
Score = 203 (76.5 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 46/116 (39%), Positives = 67/116 (57%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G +L+FL G I+ ++L R + K ++ ++S L T Q F PP R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPPGVR 924
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
K+VLATNIAET +TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 980
Score = 196 (74.1 bits), Expect = 6.0e-35, Sum P(3) = 6.0e-35
Identities = 36/87 (41%), Positives = 61/87 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + L + S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVD 735
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
++KFS +F P+ RI GR +PV++++
Sbjct: 736 SEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 73 (30.8 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 1137 KKMPKTLGKSRAELG-GDHLVLLNIYNQWADA----DFSTQ--WCYENFIQHRSMKRARD 1189
+K L KS + DHL + N Y W A + ++ +C NF+ S+ D
Sbjct: 1117 RKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLED 1176
Query: 1190 VREQLIGLVQ 1199
V+++L+ LV+
Sbjct: 1177 VKQELMKLVK 1186
Score = 61 (26.5 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 1042 PTETVNIRKAI-TAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR 1092
P + + + KA+ AG + ++ K+ +KS K A +T +HP SS+ +L
Sbjct: 1209 PFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQT 1267
Query: 1093 --WVLYHELVFTTKEFMRQVTEI 1113
W+LY E V T+ ++R+ T I
Sbjct: 1268 YGWLLYQEKVRYTRVYLRETTLI 1290
Score = 61 (26.5 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 1209 PTETVNIRKAI-TAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR 1259
P + + + KA+ AG + ++ K+ +KS K A +T +HP SS+ +L
Sbjct: 1209 PFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQT 1267
Query: 1260 --WVLYHELVFTTKEFMRQVTEI 1280
W+LY E V T+ ++R+ T I
Sbjct: 1268 YGWLLYQEKVRYTRVYLRETTLI 1290
Score = 43 (20.2 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 636 IQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
+ L P RD E EK+K++LN ET K ++ K L++ ++ Q
Sbjct: 451 VHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAK--LLNKLKQQQ 500
Score = 40 (19.1 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 260 GEEVLRPE-VSQPFRSFGYLGVMQDCRYIGTYL 291
G+ + P V++ +++G+L + RY YL
Sbjct: 1252 GKAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYL 1284
Score = 38 (18.4 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 637 QALSLPGNRDK-GEEEMTEKQKKKLNIEETKKSLPIY 672
QA + ++K G++E EK +K ET + P++
Sbjct: 274 QAATFKLEKNKQGQKEAQEKIRKFQREMETLEDHPVF 310
Score = 37 (18.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 363 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 392
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 292 (107.8 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 81/265 (30%), Positives = 129/265 (48%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A SV I D VYVID G K+ ++ GMESL +S+A+A Q
Sbjct: 907 NIAETSVTIDDV----VYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRVA 962
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDL--IHF---DFLDPPP 894
CF L+++ Y H+L +PEIQR+ L L +K L + +H ++PP
Sbjct: 963 SGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPR 1022
Query: 895 HETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
E+L + +L LGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 1023 TESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAA 1082
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA-----DADFSTQWCYE 1009
L+ F P DK A+ + +F + D+L LL Y W + S +C E
Sbjct: 1083 SLAFKSP-FVSPWDKREEANKKKLDFAVGNSDYLALLQAYKGWRLSTKEGSQASYNYCRE 1141
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRV 1034
NF+ R ++ ++ Q L+ +
Sbjct: 1142 NFLSGRVLQEIASLKRQFTELLSDI 1166
Score = 230 (86.0 bits), Expect = 4.8e-31, Sum P(4) = 4.8e-31
Identities = 50/135 (37%), Positives = 80/135 (59%)
Query: 95 DYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYS 154
+ I+A + I+ + P G +L+FL G EI+ E LQ K ++ P++S
Sbjct: 822 ELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHS 881
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
+L ++ Q +FL P K++++TNIAETS+TID+++YVID G K+ ++ GMESL
Sbjct: 882 SLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESL 941
Query: 215 TVVPISKASANQRAG 229
+S+A+A QR G
Sbjct: 942 EDTFVSRANALQRKG 956
Score = 203 (76.5 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 45/133 (33%), Positives = 67/133 (50%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEA---GFTKDKMKIGCTQ 722
++ LP + ++ ++D + HQVL++ G TG GKTTQIPQ++ +A G I CTQ
Sbjct: 534 RQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICTQ 593
Query: 723 PXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLA 782
P +E ++G VGY IR E S T + Y T G L R + L
Sbjct: 594 PRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQ 653
Query: 783 SYSVMIIDEAHPK 795
+ +I+DE H +
Sbjct: 654 GITHVIVDEVHER 666
Score = 189 (71.6 bits), Expect = 6.0e-35, Sum P(4) = 6.0e-35
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R + L + +I+DE HERT +D L ++KDI+ R DL++++ SATL+
Sbjct: 638 TTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLN 697
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A+ FS++F P+ IPGR FPVD ++
Sbjct: 698 AELFSQYFHSCPIINIPGRTFPVDQFF 724
Score = 66 (28.3 bits), Expect = 4.8e-31, Sum P(4) = 4.8e-31
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWA-----DADFSTQWCYENFIQHRSMKR 1186
E++ KK+ +G S D+L LL Y W + S +C ENF+ R ++
Sbjct: 1098 EEANKKKLDFAVGNS------DYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQE 1151
Query: 1187 ARDVREQLIGLVQRV 1201
++ Q L+ +
Sbjct: 1152 IASLKRQFTELLSDI 1166
Score = 56 (24.8 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 1073 KHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1113
K++ V IHP+S ++ E P +++YHE + T++ F+R + +
Sbjct: 1251 KNDGYVHIHPSSVNYQTRHFESP-YLVYHEKIKTSRVFIRDCSMV 1294
Score = 56 (24.8 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 1240 KHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1280
K++ V IHP+S ++ E P +++YHE + T++ F+R + +
Sbjct: 1251 KNDGYVHIHPSSVNYQTRHFESP-YLVYHEKIKTSRVFIRDCSMV 1294
Score = 39 (18.8 bits), Expect = 6.0e-35, Sum P(4) = 6.0e-35
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 640 SLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRD 684
S P R +E + K+ EE ++ L +D AV+D
Sbjct: 739 SSPYRRKTKQENKVTARHKRTAFEEVEEDLRHAGLLEDTDTAVKD 783
Score = 38 (18.4 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 525 EADILDDEYLFS-EQELT 541
E D LDDE +S +QE++
Sbjct: 141 EPDYLDDEQCWSADQEVS 158
Score = 37 (18.1 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 248 GEEVLRGCAHVLGEEV 263
G+ L+G HV+ +EV
Sbjct: 648 GDLTLQGITHVIVDEV 663
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 285 (105.4 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 81/265 (30%), Positives = 129/265 (48%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A S+ I D VYVID G K+ +++ GMESL +S+A+A Q
Sbjct: 909 NIAETSITIDDV----VYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVA 964
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI---NDLIH-FDFLDPPPH 895
CF L+T+ + H+L +PEIQR+ L L +K L + ++L F L PPH
Sbjct: 965 SGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEPPH 1024
Query: 896 -ETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
++L + +L LGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 1025 ADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAA 1084
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA-----DADFSTQWCYE 1009
L+ F P DK A+ + F D+L LL Y W S +C +
Sbjct: 1085 SLAFKSP-FVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYNYCRQ 1143
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRV 1034
NF+ R ++ ++ Q L+ +
Sbjct: 1144 NFLSGRVLQEMASLKRQFTELLSDI 1168
Score = 220 (82.5 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 49/123 (39%), Positives = 75/123 (60%)
Query: 108 HATQP-LGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFL 166
H+ P G ILVFL G EI+ E LQ + +I P++S+L ++ Q +F+
Sbjct: 836 HSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV 895
Query: 167 PTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQ 226
P K++++TNIAETS+TID+++YVID G K+ +++ GMESL +S+A+A Q
Sbjct: 896 KPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ 955
Query: 227 RAG 229
R G
Sbjct: 956 RKG 958
Score = 205 (77.2 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 49/164 (29%), Positives = 80/164 (48%)
Query: 637 QALSLPGNRDKGEEEMTEKQKKKL--NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
QA S+ K ++ KQ + ++ + ++SLP + +++++ + HQVL++ G T
Sbjct: 503 QAKSVHAENVKICKQFRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMT 562
Query: 695 GSGKTTQIPQYLHEAGFTKDKMKIG---CTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAI 751
G GKTTQIPQ++ + K+ CTQP +E ++G VGY I
Sbjct: 563 GCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQI 622
Query: 752 RFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
R E S T + Y T G L R + L + +I+DE H +
Sbjct: 623 RLESVKSSATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHER 666
Score = 190 (71.9 bits), Expect = 3.4e-35, Sum P(3) = 3.4e-35
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R + L + +I+DE HERT +D L ++KDIV R L++++ SATL+
Sbjct: 638 TTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLN 697
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A+ FSE+F+ PV IPGR FPVD ++
Sbjct: 698 AELFSEYFNSCPVITIPGRTFPVDQFF 724
Score = 56 (24.8 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 1065 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1113
KS K K++ V IHP+S ++ + P +++YHE + T++ F+R + +
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLVYHEKIKTSRVFIRDCSMV 1296
Score = 56 (24.8 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 1232 KSGSYK-TAKHNQTVMIHPNSSLFE----ELPRWVLYHELVFTTKEFMRQVTEI 1280
KS K K++ V IHP+S ++ + P +++YHE + T++ F+R + +
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSP-YLVYHEKIKTSRVFIRDCSMV 1296
Score = 52 (23.4 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWA-----DADFSTQWCYENFIQHRSMKR 1186
E++ KK+ S D+L LL Y W S +C +NF+ R ++
Sbjct: 1100 EEANQKKLEFAFANS------DYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQE 1153
Query: 1187 ARDVREQLIGLVQRV 1201
++ Q L+ +
Sbjct: 1154 MASLKRQFTELLSDI 1168
Score = 42 (19.8 bits), Expect = 3.8e-36, Sum P(4) = 3.8e-36
Identities = 13/73 (17%), Positives = 28/73 (38%)
Query: 460 ERLKNRDKNNTKNVATSRQDKRXXXXXXXXXXXXXXSRDKIIPKLRIESRRKYLEKRKED 519
E N D +NT ++ +R R K P+ ++ + ++ ++
Sbjct: 45 ENYINSDNSNT--CLMKKRKRRTNGIPSNSSVRKGDGRPKWKPEAKVPLQTLHMTSENQE 102
Query: 520 KVAELEADILDDE 532
KV L D+ + +
Sbjct: 103 KVKALLRDLQEQD 115
Score = 38 (18.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 248 GEEVLRGCAHVLGEEV 263
G+ L+G H++ +EV
Sbjct: 648 GDTALQGVTHIIVDEV 663
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 282 (104.3 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 78/246 (31%), Positives = 124/246 (50%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFRLYT ++
Sbjct: 943 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGF 1002
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
LE +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1003 LE-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQPQVISNAMNLLRKIGACEP 1061
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
LT LG+ +A P++ +GKML+ + C+E + T+A++++ F P +
Sbjct: 1062 SEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSP-FITPIGRKDE 1120
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARDVREQ 1026
AD A+ + + DHL + N Y W A F ++ +C NF+ S+ DV+++
Sbjct: 1121 ADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQE 1180
Query: 1027 LIGLVQ 1032
L+ LV+
Sbjct: 1181 LMKLVR 1186
Score = 211 (79.3 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 50/116 (43%), Positives = 71/116 (61%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G +L+FL G I+ ++L + RR S+ +LI L +S L T Q F+ PP R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSND-RRFYSERYQLIAL--HSVLSTQDQAAAFMLPPPGVR 924
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
K+VLATNIAET +TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 980
Score = 207 (77.9 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 62/195 (31%), Positives = 97/195 (49%)
Query: 616 AKDREHQEQYELLLDNQIDFIQALSL-P-GNRD----KGEEEMTEKQKKKLNIEETKKSL 669
A+D E E +E L+ ++ D + ALSL P G D + + K + + ++ L
Sbjct: 517 AEDPE--ESWENLVSDE-D-LSALSLEPTGAEDLEPVRNLFRRLQSTPKYQRLLKERQQL 572
Query: 670 PIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKD----KMKIGCTQPXX 725
P++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E D K I CTQP
Sbjct: 573 PVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIVCTQPRR 632
Query: 726 XXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPD 780
EE+G + G GY IR E SE T + Y T G L R+ +
Sbjct: 633 ISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGL 692
Query: 781 LASYSVMIIDEAHPK 795
LA S +I+DE H +
Sbjct: 693 LADVSHVIVDEVHER 707
Score = 198 (74.8 bits), Expect = 3.4e-35, Sum P(3) = 3.4e-35
Identities = 37/87 (42%), Positives = 60/87 (68%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + LA S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 679 TTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVD 738
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
+ KFS +F P+ RI GR +PV++++
Sbjct: 739 SDKFSTYFTHCPILRISGRSYPVEVFH 765
Score = 78 (32.5 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 1137 KKMPKTLGKSR-AELGGDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARD 1189
+K L KS A DHL + N Y W A F ++ +C NF+ S+ D
Sbjct: 1117 RKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLED 1176
Query: 1190 VREQLIGLVQ 1199
V+++L+ LV+
Sbjct: 1177 VKQELMKLVR 1186
Score = 51 (23.0 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 1080 IHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEI 1113
+HP SS+ +L W+LY E V + ++R+ T I
Sbjct: 1253 VHP-SSVNRDLQTYGWLLYQEKVRYARVYLRETTLI 1287
Score = 51 (23.0 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 1247 IHPNSSLFEELPR--WVLYHELVFTTKEFMRQVTEI 1280
+HP SS+ +L W+LY E V + ++R+ T I
Sbjct: 1253 VHP-SSVNRDLQTYGWLLYQEKVRYARVYLRETTLI 1287
Score = 46 (21.3 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 636 IQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
+ L P RD E EK+K++LN ET K ++ K L+ ++ Q L + +
Sbjct: 452 VHQLLPPTYRDVWVEWSDEEKKKEELNKMETNKPRDLFIAK--LLSKLKQQQQLQQQRQH 509
Query: 695 GSGKT 699
KT
Sbjct: 510 PENKT 514
Score = 46 (21.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 18/95 (18%), Positives = 40/95 (42%)
Query: 198 GFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSDFRGCAHVLGEEVLRGCAH 257
GF ++ + G ++L+ I+ A AG+ + + + E++
Sbjct: 1189 GFSSSTSWEGKKGPQALSFQDIALLKAVLAAGLYDSVGKIMCTKSVD--VTEKLACMVET 1246
Query: 258 VLGEEVLRPE-VSQPFRSFGYLGVMQDCRYIGTYL 291
G+ + P V++ +++G+L + RY YL
Sbjct: 1247 AQGKAQVHPSSVNRDLQTYGWLLYQEKVRYARVYL 1281
Score = 40 (19.1 bits), Expect = 8.7e-27, Sum P(4) = 8.7e-27
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 778 EPDLASYSVMIIDEAHPKVY 797
E DLA S+ + D H +Y
Sbjct: 1120 EADLAKSSLAVADSDHLTIY 1139
Score = 38 (18.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 643 GNRDKGEEEMTEKQKKKLNI 662
G++ +E+ + Q+KK NI
Sbjct: 246 GSKGSEDEDKFDPQQKKANI 265
Score = 37 (18.1 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 364 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 393
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 397 (144.8 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 85/187 (45%), Positives = 122/187 (65%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
+TDG L RE + +P L YSV+++DEAHERTL+TDI GL+K I + R DL+L+++SATL
Sbjct: 117 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 176
Query: 61 DAQKFSEFF----------DDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHAT 110
DA KF +FF D + + GR FPVDI+Y ++P DYI + V ++++IH T
Sbjct: 177 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQT 236
Query: 111 QPLGDILVFLTGQEEIETCNEILQDRVR---RLGSKIKELIILPVYSNLPTDMQTKIFLP 167
+ GD+L FLTGQEE+ET +L ++ R R G K + L +LP+Y+ LP+ Q K+F
Sbjct: 237 EGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFER 295
Query: 168 TPPNARK 174
+ RK
Sbjct: 296 VSRSVRK 302
Score = 213 (80.0 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 44/98 (44%), Positives = 58/98 (59%)
Query: 704 QYLHEAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSE-RTI 762
+YL EAG+T + +G TQP EE G LG EVGY IRF+DCT + T
Sbjct: 54 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 113
Query: 763 IKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
IK++TDG L RE + +P L YSV+++DEAH + D
Sbjct: 114 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTD 151
Score = 37 (18.1 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 660 LNIEETKKSLPIYPF 674
L+IE+ ++ LP++ +
Sbjct: 41 LSIEQQRQKLPVFKY 55
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 267 (99.0 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 75/246 (30%), Positives = 122/246 (49%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFR+YT ++
Sbjct: 945 VFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESF 1004
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
+E +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1005 ME-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSRALDPPQPQVIGNAMNLLRKIGACQL 1063
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C++ + T+A++++ F P +
Sbjct: 1064 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSP-FTTPIGRKDE 1122
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADAD------FSTQWCYENFIQHRSMKRARDVREQ 1026
AD A+ + + DHL + N Y W A +C NF+ S+ DV+++
Sbjct: 1123 ADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRAEMTYCRRNFLNRTSLLTLEDVKQE 1182
Query: 1027 LIGLVQ 1032
LI LV+
Sbjct: 1183 LIKLVR 1188
Score = 209 (78.6 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 38/89 (42%), Positives = 63/89 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + L+S S +I+DE HER++H+D L ++K+I+ RSDL L++ SAT+D
Sbjct: 680 TTGVLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVD 739
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYYTK 90
++KFS +F P+ RI GR +PV++++ +
Sbjct: 740 SEKFSSYFAHCPILRISGRSYPVEVFHVE 768
Score = 206 (77.6 bits), Expect = 6.2e-35, Sum P(4) = 6.2e-35
Identities = 46/138 (33%), Positives = 73/138 (52%)
Query: 666 KKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKD---KMKIGCTQ 722
++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E + K I CTQ
Sbjct: 571 RQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVCTQ 630
Query: 723 PXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTIIKYMTDGTLHREFLS 777
P EE+G + G GY IR E T E T + Y T G L R+
Sbjct: 631 PRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKLQE 690
Query: 778 EPDLASYSVMIIDEAHPK 795
+ L+S S +I+DE H +
Sbjct: 691 DGLLSSISHVIVDEVHER 708
Score = 185 (70.2 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 45/117 (38%), Positives = 68/117 (58%)
Query: 114 GDILVFLTGQEEIETCNEILQ-DRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA 172
G +L+FL G I+ +++ DR L + + ++ ++S L T Q F P
Sbjct: 869 GAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHR---LIALHSVLSTQDQAAAFTVPPLGV 925
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK+VLATNIAET +TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 926 RKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQG 982
Score = 75 (31.5 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 22/70 (31%), Positives = 31/70 (44%)
Query: 1137 KKMPKTLGKSRAELG-GDHLVLLNIYNQWADAD------FSTQWCYENFIQHRSMKRARD 1189
+K L KS L DHL + N Y W A +C NF+ S+ D
Sbjct: 1119 RKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRAEMTYCRRNFLNRTSLLTLED 1178
Query: 1190 VREQLIGLVQ 1199
V+++LI LV+
Sbjct: 1179 VKQELIKLVR 1188
Score = 59 (25.8 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 1044 ETVNIRKAITAGYFYHIAKLSKSGSY----KTAKHNQTVM----IHPNSSLFE-ELPRWV 1094
E ++ +TAG + ++ K+ + S K A +T +HP+S + ++ W+
Sbjct: 1214 EIALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQVHPSSVNRDLQVHGWL 1273
Query: 1095 LYHELVFTTKEFMRQVTEI 1113
LY E V K ++R+ T I
Sbjct: 1274 LYQEKVRYAKVYLRETTLI 1292
Score = 59 (25.8 bits), Expect = 6.2e-35, Sum P(4) = 6.2e-35
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 1211 ETVNIRKAITAGYFYHIAKLSKSGSY----KTAKHNQTVM----IHPNSSLFE-ELPRWV 1261
E ++ +TAG + ++ K+ + S K A +T +HP+S + ++ W+
Sbjct: 1214 EIALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQVHPSSVNRDLQVHGWL 1273
Query: 1262 LYHELVFTTKEFMRQVTEI 1280
LY E V K ++R+ T I
Sbjct: 1274 LYQEKVRYAKVYLRETTLI 1292
Score = 45 (20.9 bits), Expect = 6.2e-35, Sum P(4) = 6.2e-35
Identities = 13/67 (19%), Positives = 32/67 (47%)
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYS---NLPTDMQTKIFLPTPPNARKVV 176
++ Q++ + ++ Q+++RR+ ++ L PV+ Q + TPP ++
Sbjct: 284 ISKQDKDKQGQKVAQEKIRRIQQEMAMLEEHPVFDPAIKTSNQQQKEKKKATPPQPQETT 343
Query: 177 LATNIAE 183
L ++ E
Sbjct: 344 LNLSLLE 350
Score = 40 (19.1 bits), Expect = 5.4e-18, Sum P(4) = 5.4e-18
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 654 EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
EK+K++ N ET K P F L++ ++ Q L E +T
Sbjct: 478 EKKKEEENKIETNK--PRDNFIAKLLNKLKQQQQLQSEKQT 516
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 270 (100.1 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 84/283 (29%), Positives = 142/283 (50%)
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGME 816
+ ++ ++K G R+ + ++A S+ + D V+VID G K+ +F++ +
Sbjct: 668 SDQKKVLKNPPAGV--RKIILSTNIAETSITVNDV----VFVIDSGKVKEKSFDALNFVT 721
Query: 817 SLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 876
L +V ISKASA Q CFRL++ +++ LE T PE+ R+ L L
Sbjct: 722 MLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHT 780
Query: 877 KALG-INDLIHFDFL----DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDP 931
K L +N I DFL +PPP + A++ L + A++ DLT+LG +A+ P++P
Sbjct: 781 KLLAPVNCPIA-DFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEP 839
Query: 932 MMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLG--GDHLV 989
+GKM+L + KC++ I+TIA L+ + A + F G DH+
Sbjct: 840 HLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMA 899
Query: 990 LLNIYNQW--ADAD-FSTQWCYENFIQHRSMKRARDVREQLIG 1029
LL + W A +D + +C +NF+ +M+ +R QL+G
Sbjct: 900 LLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLG 942
Score = 211 (79.3 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 46/156 (29%), Positives = 88/156 (56%)
Query: 643 GNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQI 702
G + G ++ K+ + + ++SLP++ +++++ +++++V++I GETGSGKTTQI
Sbjct: 167 GRLNNGIPQIPVKRGES-EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQI 225
Query: 703 PQYLHEAGFTKD-KMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDC-TSER 760
PQ+L + F +I CTQP E ++G +GY IR E S +
Sbjct: 226 PQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPK 285
Query: 761 TIIKYMTDGTLHREFLS-EPDLASYSVMIIDEAHPK 795
T++ + T+G L R ++ + L++ + +I+DE H +
Sbjct: 286 TLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHER 321
Score = 196 (74.1 bits), Expect = 9.1e-23, Sum P(3) = 9.1e-23
Identities = 45/115 (39%), Positives = 70/115 (60%)
Query: 116 ILVFLTGQEEIETCNE-ILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
IL+FL G +EI + IL D +R + ++SN+ T Q K+ P RK
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDD-KRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 683
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
++L+TNIAETS+T++++++VID G K+ +F++ + L +V ISKASA QR G
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKG 738
Score = 141 (54.7 bits), Expect = 9.1e-23, Sum P(3) = 9.1e-23
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 2 TDGTLHREFLS-EPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
T+G L R ++ + L++ + +I+DE HER +D L ++D+++ LKL++SSA L
Sbjct: 292 TNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAAL 351
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPV 84
D F +F PV I GR F V
Sbjct: 352 DVNLFIRYFGSCPVIYIQGRPFEV 375
Score = 77 (32.2 bits), Expect = 9.1e-23, Sum P(3) = 9.1e-23
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 1125 YYKPRELEDSTNKKMPKTLGKSRAELG--GDHLVLLNIYNQW--ADAD-FSTQWCYENFI 1179
Y P L ++K L + R G DH+ LL + W A +D + +C +NF+
Sbjct: 866 YRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFL 925
Query: 1180 QHRSMKRARDVREQLIG 1196
+M+ +R QL+G
Sbjct: 926 SQATMEIIIGMRTQLLG 942
Score = 39 (18.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 155 NLPTDMQTKIFLPTPPNARKV 175
NL Q I+ TP N RK+
Sbjct: 1246 NLEISQQKGIWSTTPSNERKL 1266
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 278 (102.9 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 83/277 (29%), Positives = 133/277 (48%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFR+YT ++
Sbjct: 943 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGF 1002
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
+ D +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1003 M-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEL 1061
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C++ + T+A++++ F P +
Sbjct: 1062 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSP-FTTPIGRKDE 1120
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADA----DFSTQ--WCYENFIQHRSMKRARDVREQ 1026
AD A+ M DHL + N Y W A + ++ +C NF+ S+ DV+++
Sbjct: 1121 ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQE 1180
Query: 1027 LIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKL 1063
LI LV+ + T R + T F IA L
Sbjct: 1181 LIKLVKAAGFSSSTTSTSWEGNRASQTLS-FQEIALL 1216
Score = 204 (76.9 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 46/116 (39%), Positives = 68/116 (58%)
Query: 114 GDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNAR 173
G +L+FL G I+ ++L + R + K ++ ++S L T Q F PP R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK---VIALHSILSTQDQAAAFTLPPPGVR 924
Query: 174 KVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
K+VLATNIAET +TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 980
Score = 202 (76.2 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 59/212 (27%), Positives = 104/212 (49%)
Query: 599 QRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMT----- 653
+++ + +Q S R ++D E E +E L+ ++ DF ALSL + E +
Sbjct: 500 KQQQQQQQQHSENKRENSEDPE--ESWENLVSDE-DF-SALSLESANVEDLEPVRNLFRK 555
Query: 654 -EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
+ K + + ++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E
Sbjct: 556 LQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLL 615
Query: 713 KD----KMKIGCTQPXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTII 763
+ K I CTQP +E+G + G GY IR E E T +
Sbjct: 616 NEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRL 675
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y T G L R+ + L++ S +I+DE H +
Sbjct: 676 LYCTTGVLLRKLQEDGLLSNVSHVIVDEVHER 707
Score = 197 (74.4 bits), Expect = 1.2e-34, Sum P(3) = 1.2e-34
Identities = 36/87 (41%), Positives = 62/87 (71%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + L++ S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 679 TTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVD 738
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
++KFS +F P+ RI GR +PV++++
Sbjct: 739 SEKFSTYFTHCPILRISGRSYPVEVFH 765
Score = 79 (32.9 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 28/101 (27%), Positives = 43/101 (42%)
Query: 1137 KKMPKTLGKSRAELG-GDHLVLLNIYNQWADA----DFSTQ--WCYENFIQHRSMKRARD 1189
+K L KS + DHL + N Y W A + ++ +C NF+ S+ D
Sbjct: 1117 RKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLED 1176
Query: 1190 VREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKL 1230
V+++LI LV+ + T R + T F IA L
Sbjct: 1177 VKQELIKLVKAAGFSSSTTSTSWEGNRASQTLS-FQEIALL 1216
Score = 51 (23.0 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 1044 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR--W 1093
E ++ + AG + ++ K+ +KS K A +T +HP SS+ +L W
Sbjct: 1212 EIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQTHGW 1270
Query: 1094 VLYHELVFTTKEFMRQVTEI 1113
+LY E + + ++R+ T I
Sbjct: 1271 LLYQEKIRYARVYLRETTLI 1290
Score = 51 (23.0 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 1211 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR--W 1260
E ++ + AG + ++ K+ +KS K A +T +HP SS+ +L W
Sbjct: 1212 EIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQTHGW 1270
Query: 1261 VLYHELVFTTKEFMRQVTEI 1280
+LY E + + ++R+ T I
Sbjct: 1271 LLYQEKIRYARVYLRETTLI 1290
Score = 42 (19.8 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 598 EQRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFI-QALSLPGNRDK-GEEEMTEK 655
EQ+ E++ +S K + E+Y L +D QA + ++K G++E EK
Sbjct: 238 EQQNEEEKNENSKSLEEEEKF-DPNERYLHLAAKLLDAKEQAATFKLEKNKQGQKEAQEK 296
Query: 656 QKKKLNIEETKKSLPIY 672
+K ET + P++
Sbjct: 297 IRKFQREMETLEDHPVF 313
Score = 40 (19.1 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 636 IQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
+ L P RD E EK++++LN ET K ++ K L++ ++ Q
Sbjct: 454 VHQLLPPTYRDVWLEWSDAEKKREELNKMETNKPRDLFIAK--LLNKLKQQQ 503
Score = 37 (18.1 bits), Expect = 3.9e-18, Sum P(3) = 3.9e-18
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 366 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 395
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 271 (100.5 bits), Expect = 3.2e-34, Sum P(5) = 3.2e-34
Identities = 75/254 (29%), Positives = 124/254 (48%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
VID G ++ F+ R M L IS+A+A Q CF ++T + + +
Sbjct: 1044 VIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMA 1103
Query: 858 DNTVPEIQRINLGNAVLMLKAL---GINDLIHFDFLDPPPHETLVLALEQLYALGALNHH 914
D PE+ R++L + + +K GI + + LDPP + + A++ L + AL
Sbjct: 1104 DQQTPEMLRLSLQDLAIRVKICKIGGIEETLS-KALDPPSAKNIRRAIDALIDVRALTQG 1162
Query: 915 GDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHAD 974
DLT LG ++A PLD +GK++L +KC++ +T+A++LS F P + AD
Sbjct: 1163 EDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSP-FVAPFGQRSQAD 1221
Query: 975 TARKNFFMLGGDHLVLLNIYNQW------ADADFST--QWCYENFIQHRSMKRARDVREQ 1026
T R F D L + N Y W A + S Q+C +NF+ +++ D++ Q
Sbjct: 1222 TVRLGFRRGDSDILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQ 1281
Query: 1027 LIGLVQRVEMELVS 1040
L LV V+ + +S
Sbjct: 1282 L--LVSLVDSKFLS 1293
Score = 211 (79.3 bits), Expect = 3.2e-34, Sum P(5) = 3.2e-34
Identities = 52/150 (34%), Positives = 78/150 (52%)
Query: 661 NIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKM-KIG 719
N+ ++ LP++ F++ ++ AV HQV+I+ GETG GK+TQ+P +L E + K KI
Sbjct: 683 NMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKIY 742
Query: 720 CTQPXXXXXXXXXXXXXEEMGV---KLGCE---VGYAIRFEDCTSERTIIKYMTDGTLHR 773
CT+P EE+G LG VGY+IR E TS T + + T G + R
Sbjct: 743 CTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMR 802
Query: 774 EFLSEPDLASYSVMIIDEAHPKVYVIDPGF 803
DL + +++DE H + ID F
Sbjct: 803 MLEGSNDLRDITHLVLDEVHERS--IDSDF 830
Score = 190 (71.9 bits), Expect = 7.3e-25, Sum P(4) = 7.3e-25
Identities = 49/115 (42%), Positives = 67/115 (58%)
Query: 116 ILVFLTGQEEIETCNEILQ-DRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARK 174
ILVFL G EI T N++L DR S + ++ P++S + T+ Q FL P RK
Sbjct: 970 ILVFLPGIAEIRTLNDLLLGDR-----SFQQNWLVYPLHSTIATEEQEAAFLVPPHGMRK 1024
Query: 175 VVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
+VLATNIAET +TI ++ VID G ++ F+ R M L IS+A+A QR G
Sbjct: 1025 IVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRG 1079
Score = 185 (70.2 bits), Expect = 2.1e-32, Sum P(3) = 2.1e-32
Identities = 34/87 (39%), Positives = 55/87 (63%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G + R DL + +++DE HER++ +D L ++K ++ R DLK+++ SAT+D
Sbjct: 796 TTGIVMRMLEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVD 855
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
A +FS + D APV +PGR FPV + +
Sbjct: 856 ADRFSNYLDGAPVLNVPGRTFPVQVNF 882
Score = 59 (25.8 bits), Expect = 7.3e-25, Sum P(4) = 7.3e-25
Identities = 46/175 (26%), Positives = 73/175 (41%)
Query: 1041 NPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWVLYHELV 1100
+P NIR+AI A + L++ G T NQ + P +F L + +L +
Sbjct: 1139 DPPSAKNIRRAIDA--LIDVRALTQ-GEDLTPLGNQLARL-P-LDVF--LGKLILLGS-I 1190
Query: 1101 FTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSRAELGGDHLVLLNI 1160
F + V I S VAP + R D+ LG R + D L + N
Sbjct: 1191 FKCLDMAITVAAILSSKSPFVAP--FGQRSQADTVR------LGFRRGD--SDILTVYNA 1240
Query: 1161 YNQW------ADADFST--QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS 1207
Y W A + S Q+C +NF+ +++ D++ QL LV V+ + +S
Sbjct: 1241 YLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQL--LVSLVDSKFLS 1293
Score = 50 (22.7 bits), Expect = 3.2e-34, Sum P(5) = 3.2e-34
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 1024 REQLI-GLVQRVEMELVSNPTETVNIRKAITAGYFYH---IAKLSKSGSYKTAKHNQTVM 1079
R+Q+ + QRV+ V++ + V+ +A+ + FY + ++ + +NQ +
Sbjct: 1315 RKQVFFEMPQRVD---VNSENDLVS--QAVLSWSFYPKLLVRDVAGGKGLRNVGNNQNIS 1369
Query: 1080 IHPNSSL--FEELPRWVLYHELVFTTKEFMR--QVTEIE 1114
+H +S E+ RW+ Y+ ++ +TK + + T +E
Sbjct: 1370 LHRSSVNRGHNEI-RWMSYYHMMQSTKSALNAHETTAVE 1407
Score = 50 (22.7 bits), Expect = 3.2e-34, Sum P(5) = 3.2e-34
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 1191 REQLI-GLVQRVEMELVSNPTETVNIRKAITAGYFYH---IAKLSKSGSYKTAKHNQTVM 1246
R+Q+ + QRV+ V++ + V+ +A+ + FY + ++ + +NQ +
Sbjct: 1315 RKQVFFEMPQRVD---VNSENDLVS--QAVLSWSFYPKLLVRDVAGGKGLRNVGNNQNIS 1369
Query: 1247 IHPNSSL--FEELPRWVLYHELVFTTKEFMR--QVTEIE 1281
+H +S E+ RW+ Y+ ++ +TK + + T +E
Sbjct: 1370 LHRSSVNRGHNEI-RWMSYYHMMQSTKSALNAHETTAVE 1407
Score = 47 (21.6 bits), Expect = 3.2e-34, Sum P(5) = 3.2e-34
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 182 AETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
A TS+ + VIDP + + S+ G P + SA+ AG
Sbjct: 20 ATTSIASKPQVRVIDPAEAQPSADGSKPGSAPPNAAPQAGGSADSSAG 67
Score = 38 (18.4 bits), Expect = 3.2e-34, Sum P(5) = 3.2e-34
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 595 PHYEQRKWEDEQMS 608
P Y QR W D+ S
Sbjct: 665 PEYYQRIWYDKSSS 678
Score = 38 (18.4 bits), Expect = 2.7e-33, Sum P(5) = 2.7e-33
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 79 GRRFPVDIYYTKAPEADYIDACVVSILQIHATQP--LGDI 116
GR V I YT P + +V +L A +P L DI
Sbjct: 493 GRDPGVKISYTAIPATAFAHQHLVHVLWSKAQEPFQLHDI 532
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 255 (94.8 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 71/248 (28%), Positives = 122/248 (49%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFR+YT ++
Sbjct: 943 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGF 1002
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
+ D +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1003 M-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACEL 1061
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C++ + T+A++++ F P +
Sbjct: 1062 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSP-FTTPIGRKDE 1120
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARDVREQ 1026
AD A+ M DHL + N Y W A + ++ +C NF+ S+ +++ +
Sbjct: 1121 ADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRR 1180
Query: 1027 LIGLVQRV 1034
L++ +
Sbjct: 1181 RTTLLKLI 1188
Score = 209 (78.6 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 59/212 (27%), Positives = 105/212 (49%)
Query: 599 QRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMT----- 653
+++ + +Q S + ++D E E +E L+ ++ DF ALSL + + E +
Sbjct: 497 KQQQQQQQQHSENKKENSEDPE--ESWENLVSDE-DF-SALSLESEKAEDLEPVRNLFRK 552
Query: 654 -EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
+ K + + ++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E
Sbjct: 553 LQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLL 612
Query: 713 KD----KMKIGCTQPXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTII 763
+ K I CTQP +E+G + G GY IR E SE T +
Sbjct: 613 NEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRL 672
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y T G L R+ + L + S +I+DE H +
Sbjct: 673 LYCTTGVLLRKLQEDGLLTNVSHVIVDEVHER 704
Score = 196 (74.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 36/87 (41%), Positives = 61/87 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + L + S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVD 735
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
++KFS +F P+ RI GR +PV++++
Sbjct: 736 SEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 196 (74.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 65/223 (29%), Positives = 108/223 (48%)
Query: 10 FLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLI-SSATLDA--QKFS 66
F+ E D + Y ++E E T++ G +K +++ + + +SA L+ QK+S
Sbjct: 772 FVLEKD-SEYCQKFLEEEEEITINVTSKAGGIK---KYQEYIPVQTGTSADLNPFYQKYS 827
Query: 67 EFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
A ++ P + +D+ + D Q + G +L+FL G I
Sbjct: 828 NRTQHAILYMNP-HKINLDLILELLTYLEITDRSP----QFKNVE--GAVLIFLPGLAHI 880
Query: 127 ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSL 186
+ ++L R + K ++ ++S L T Q F P RK+VLATNIAET +
Sbjct: 881 QQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGI 937
Query: 187 TIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 938 TIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 980
Score = 56 (24.8 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 1044 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR--W 1093
E ++ +TAG + ++ K+ +KS K A +T +HP SS+ +L W
Sbjct: 1209 EIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQTYGW 1267
Query: 1094 VLYHELVFTTKEFMRQVTEI 1113
+LY E + + ++R+ T I
Sbjct: 1268 LLYQEKIRYARVYLRETTLI 1287
Score = 56 (24.8 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 1211 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR--W 1260
E ++ +TAG + ++ K+ +KS K A +T +HP SS+ +L W
Sbjct: 1209 EIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQTYGW 1267
Query: 1261 VLYHELVFTTKEFMRQVTEI 1280
+LY E + + ++R+ T I
Sbjct: 1268 LLYQEKIRYARVYLRETTLI 1287
Score = 56 (24.8 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 1137 KKMPKTLGKSRAELG-GDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARD 1189
+K L KS + DHL + N Y W A + ++ +C NF+ S+ +
Sbjct: 1117 RKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEE 1176
Query: 1190 VREQLIGLVQRV 1201
++ + L++ +
Sbjct: 1177 IKRRRTTLLKLI 1188
Score = 43 (20.2 bits), Expect = 8.0e-17, Sum P(3) = 8.0e-17
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 636 IQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
+ L P RD E EK+K++LN ET K ++ K L++ ++ Q
Sbjct: 451 VHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAK--LLNKLKQQQ 500
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 260 GEEVLRPE-VSQPFRSFGYLGVMQDCRYIGTYL 291
G+ + P V++ +++G+L + RY YL
Sbjct: 1249 GKAQVHPSSVNRDLQTYGWLLYQEKIRYARVYL 1281
Score = 38 (18.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 86 IYYTKAPEADYIDACVVSILQ----IHATQPLGDILVF--LTGQEEIETCNEILQD 135
I YTK+ + AC+V Q +H + D+ + L QE+I L++
Sbjct: 1228 IIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEKIRYARVYLRE 1283
Score = 37 (18.1 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 363 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 392
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 252 (93.8 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 70/238 (29%), Positives = 117/238 (49%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFR+YT ++
Sbjct: 943 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGF 1002
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
+ D +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1003 M-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACEL 1061
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C++ + T+A++++ F P +
Sbjct: 1062 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSP-FTTPIGRKDE 1120
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARDVR 1024
AD A+ M DHL + N Y W A + ++ +C NF+ S+ +++
Sbjct: 1121 ADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIK 1178
Score = 209 (78.6 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 59/212 (27%), Positives = 105/212 (49%)
Query: 599 QRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMT----- 653
+++ + +Q S + ++D E E +E L+ ++ DF ALSL + + E +
Sbjct: 497 KQQQQQQQQHSENKKENSEDPE--ESWENLVSDE-DF-SALSLESEKAEDLEPVRNLFRK 552
Query: 654 -EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
+ K + + ++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E
Sbjct: 553 LQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLL 612
Query: 713 KD----KMKIGCTQPXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTII 763
+ K I CTQP +E+G + G GY IR E SE T +
Sbjct: 613 NEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRL 672
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y T G L R+ + L + S +I+DE H +
Sbjct: 673 LYCTTGVLLRKLQEDGLLTNVSHVIVDEVHER 704
Score = 196 (74.1 bits), Expect = 2.8e-32, Sum P(3) = 2.8e-32
Identities = 36/87 (41%), Positives = 61/87 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + L + S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVD 735
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
++KFS +F P+ RI GR +PV++++
Sbjct: 736 SEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 196 (74.1 bits), Expect = 2.8e-32, Sum P(3) = 2.8e-32
Identities = 65/223 (29%), Positives = 108/223 (48%)
Query: 10 FLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLI-SSATLDA--QKFS 66
F+ E D + Y ++E E T++ G +K +++ + + +SA L+ QK+S
Sbjct: 772 FVLEKD-SEYCQKFLEEEEEITINVTSKAGGIK---KYQEYIPVQTGTSADLNPFYQKYS 827
Query: 67 EFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
A ++ P + +D+ + D Q + G +L+FL G I
Sbjct: 828 NRTQHAILYMNP-HKINLDLILELLTYLEITDRSP----QFKNVE--GAVLIFLPGLAHI 880
Query: 127 ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSL 186
+ ++L R + K ++ ++S L T Q F P RK+VLATNIAET +
Sbjct: 881 QQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGI 937
Query: 187 TIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 938 TIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 980
Score = 56 (24.8 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 1044 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR--W 1093
E ++ +TAG + ++ K+ +KS K A +T +HP SS+ +L W
Sbjct: 1212 EIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQTYGW 1270
Query: 1094 VLYHELVFTTKEFMRQVTEI 1113
+LY E + + ++R+ T I
Sbjct: 1271 LLYQEKIRYARVYLRETTLI 1290
Score = 56 (24.8 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 1211 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR--W 1260
E ++ +TAG + ++ K+ +KS K A +T +HP SS+ +L W
Sbjct: 1212 EIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQTYGW 1270
Query: 1261 VLYHELVFTTKEFMRQVTEI 1280
+LY E + + ++R+ T I
Sbjct: 1271 LLYQEKIRYARVYLRETTLI 1290
Score = 53 (23.7 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 1137 KKMPKTLGKSRAELG-GDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARD 1189
+K L KS + DHL + N Y W A + ++ +C NF+ S+ +
Sbjct: 1117 RKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEE 1176
Query: 1190 VR 1191
++
Sbjct: 1177 IK 1178
Score = 43 (20.2 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 636 IQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
+ L P RD E EK+K++LN ET K ++ K L++ ++ Q
Sbjct: 451 VHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAK--LLNKLKQQQ 500
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 260 GEEVLRPE-VSQPFRSFGYLGVMQDCRYIGTYL 291
G+ + P V++ +++G+L + RY YL
Sbjct: 1252 GKAQVHPSSVNRDLQTYGWLLYQEKIRYARVYL 1284
Score = 38 (18.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 86 IYYTKAPEADYIDACVVSILQ----IHATQPLGDILVF--LTGQEEIETCNEILQD 135
I YTK+ + AC+V Q +H + D+ + L QE+I L++
Sbjct: 1231 IIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEKIRYARVYLRE 1286
Score = 37 (18.1 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 363 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 392
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 252 (93.8 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 73/245 (29%), Positives = 119/245 (48%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
V+VID G K+N ++ + M SL +SKASA Q CFR+YT ++
Sbjct: 943 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGF 1002
Query: 856 LEDNTVPEIQRINLGNAVL-MLKA-LGINDLIHFDFLDPPPHETLVLALEQLYALGALN- 912
+ D +VPEI R+ L L ++K LG + LDPP + + A+ L +GA
Sbjct: 1003 M-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACEL 1061
Query: 913 HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIH 972
+ LT LG+ +A P++ +GKML+ + C++ + T+A++++ F P +
Sbjct: 1062 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSP-FTTPIGRKDE 1120
Query: 973 ADTARKNFFMLGGDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARDVREQ 1026
AD A+ M DHL + N Y W A + ++ +C NF+ S+ R
Sbjct: 1121 ADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERRRTT 1180
Query: 1027 LIGLV 1031
L+ L+
Sbjct: 1181 LLKLM 1185
Score = 209 (78.6 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 59/212 (27%), Positives = 105/212 (49%)
Query: 599 QRKWEDEQMSSAIFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMT----- 653
+++ + +Q S + ++D E E +E L+ ++ DF ALSL + + E +
Sbjct: 497 KQQQQQQQQHSENKKENSEDPE--ESWENLVSDE-DF-SALSLESEKAEDLEPVRNLFRK 552
Query: 654 -EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFT 712
+ K + + ++ LP++ + +++ ++ H+V+++ GETGSGK+TQ+P +L E
Sbjct: 553 LQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLL 612
Query: 713 KD----KMKIGCTQPXXXXXXXXXXXXXEEMGVKLG-----CEVGYAIRFEDCTSERTII 763
+ K I CTQP +E+G + G GY IR E SE T +
Sbjct: 613 NEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRL 672
Query: 764 KYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
Y T G L R+ + L + S +I+DE H +
Sbjct: 673 LYCTTGVLLRKLQEDGLLTNVSHVIVDEVHER 704
Score = 196 (74.1 bits), Expect = 2.8e-32, Sum P(3) = 2.8e-32
Identities = 36/87 (41%), Positives = 61/87 (70%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ + L + S +I+DE HER++ +D L ++K+I++ RSDL L++ SAT+D
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVD 735
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
++KFS +F P+ RI GR +PV++++
Sbjct: 736 SEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 196 (74.1 bits), Expect = 2.8e-32, Sum P(3) = 2.8e-32
Identities = 65/223 (29%), Positives = 108/223 (48%)
Query: 10 FLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLI-SSATLDA--QKFS 66
F+ E D + Y ++E E T++ G +K +++ + + +SA L+ QK+S
Sbjct: 772 FVLEKD-SEYCQKFLEEEEEITINVTSKAGGIK---KYQEYIPVQTGTSADLNPFYQKYS 827
Query: 67 EFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEI 126
A ++ P + +D+ + D Q + G +L+FL G I
Sbjct: 828 NRTQHAILYMNP-HKINLDLILELLTYLEITDRSP----QFKNVE--GAVLIFLPGLAHI 880
Query: 127 ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSL 186
+ ++L R + K ++ ++S L T Q F P RK+VLATNIAET +
Sbjct: 881 QQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGI 937
Query: 187 TIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
TI ++++VID G K+N ++ + M SL +SKASA QR G
Sbjct: 938 TIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 980
Score = 56 (24.8 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 1044 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR--W 1093
E ++ +TAG + ++ K+ +KS K A +T +HP SS+ +L W
Sbjct: 1212 EIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQTYGW 1270
Query: 1094 VLYHELVFTTKEFMRQVTEI 1113
+LY E + + ++R+ T I
Sbjct: 1271 LLYQEKIRYARVYLRETTLI 1290
Score = 56 (24.8 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 1211 ETVNIRKAITAGYFYHIAKL--SKSGSY--KTAKHNQTVM----IHPNSSLFEELPR--W 1260
E ++ +TAG + ++ K+ +KS K A +T +HP SS+ +L W
Sbjct: 1212 EIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHP-SSVNRDLQTYGW 1270
Query: 1261 VLYHELVFTTKEFMRQVTEI 1280
+LY E + + ++R+ T I
Sbjct: 1271 LLYQEKIRYARVYLRETTLI 1290
Score = 53 (23.7 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 1137 KKMPKTLGKSRAELG-GDHLVLLNIYNQWADAD----FSTQ--WCYENFIQHRSMKRARD 1189
+K L KS + DHL + N Y W A + ++ +C NF+ S+
Sbjct: 1117 RKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLER 1176
Query: 1190 VREQLIGLV 1198
R L+ L+
Sbjct: 1177 RRTTLLKLM 1185
Score = 43 (20.2 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 636 IQALSLPGNRDKGEE-EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQ 686
+ L P RD E EK+K++LN ET K ++ K L++ ++ Q
Sbjct: 451 VHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAK--LLNKLKQQQ 500
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 260 GEEVLRPE-VSQPFRSFGYLGVMQDCRYIGTYL 291
G+ + P V++ +++G+L + RY YL
Sbjct: 1252 GKAQVHPSSVNRDLQTYGWLLYQEKIRYARVYL 1284
Score = 38 (18.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 86 IYYTKAPEADYIDACVVSILQ----IHATQPLGDILVF--LTGQEEIETCNEILQD 135
I YTK+ + AC+V Q +H + D+ + L QE+I L++
Sbjct: 1231 IIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEKIRYARVYLRE 1286
Score = 37 (18.1 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 644 NRDKGEEEMTEKQKKKLNIEETKKSLPIYP 673
N D T K K+ I+ +K+LP P
Sbjct: 363 NFDYTARSWTGKSPKQFLIDWVRKNLPKSP 392
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 400 (145.9 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 81/153 (52%), Positives = 103/153 (67%)
Query: 648 GEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLH 707
G + + +K +L+I E ++SLPI+ K+ LI AV D+Q+LI+ GETGSGKTTQI QYL
Sbjct: 454 GGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLA 513
Query: 708 EAGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
EAG+T + KIGCTQP EE G LG EVGY IRFEDCTS T+IKYMT
Sbjct: 514 EAGYTS-RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 572
Query: 768 DGTLHREFLSEPDLASYSVMIIDEAHPKVYVID 800
DG L RE L +PDL Y+++++DEAH + D
Sbjct: 573 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD 605
Score = 397 (144.8 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 69/122 (56%), Positives = 99/122 (81%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
MTDG L RE L +PDL Y+++++DEAHERT+HTD+LFGL+K V+ R D+KL+++SATL
Sbjct: 571 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 630
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVFL 120
DA KFS++F +AP+F IPGR +PV+I YTK PE DY+DA +++++QIH T+P G+ +V +
Sbjct: 631 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMI 690
Query: 121 TG 122
G
Sbjct: 691 HG 692
Score = 45 (20.9 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 449 DDDRKERDEFSERLKNRDKNNTKNVATSRQDKR 481
D R+ R R + RD+N K+ SR R
Sbjct: 107 DRKRRHRSRSRSRSRTRDRNRGKSRYYSRSRSR 139
Score = 42 (19.8 bits), Expect = 4.5e-33, Sum P(2) = 4.5e-33
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 451 DRKERDEFSERLKNR--DKN 468
DR++RD++ ER R DK+
Sbjct: 144 DRRDRDKYLERSNERWRDKH 163
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 254 (94.5 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 75/251 (29%), Positives = 121/251 (48%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
V+D G Q FNS TG ++ SKAS Q CF+++T + + +L+
Sbjct: 979 VVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFTK-SMESQLQ 1037
Query: 858 DNTVPEIQRINLGNAVLMLKAL---GINDLIHFDFL----DPPPHETLVLALEQLYALGA 910
D PEI R +L L +K N I DFL +PP E + ++ +L ++ A
Sbjct: 1038 DQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQ-DFLNRAIEPPSSEQIQSSINELISIDA 1096
Query: 911 LN----HHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRP 966
L +LT LG +A P+D +GKMLL ++C++ I+TIA+ L+ F P
Sbjct: 1097 LKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSP-FLNP 1155
Query: 967 KDKIIHADTARKNFFMLGGDHLVLLNIYNQWADA--DFST-QWCYENFIQHRSMKRARDV 1023
DK I K DH L+N YN W + D + Q+C EN++ +++ +D+
Sbjct: 1156 PDKTIRP--MDKFSSPNQSDHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDL 1213
Query: 1024 REQLIGLVQRV 1034
+ Q + ++ +
Sbjct: 1214 KLQFVEILSEI 1224
Score = 194 (73.4 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 51/161 (31%), Positives = 84/161 (52%)
Query: 644 NRD-KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQI 702
N++ K E + K K + + ++SLP++ K++ + ++++QV++I ETG GK+TQI
Sbjct: 601 NKELKNEYDRLIKVDK--GVIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQI 658
Query: 703 PQYLHEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEEMGV-----KLGCEVGYAIRFE 754
PQY+ E+ +++K I CTQP E +G VGY IR E
Sbjct: 659 PQYILESFISQEKGSECNIVCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNE 718
Query: 755 DCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
S+ T + + T G L R L +++ S +IIDE H +
Sbjct: 719 SKRSQSTRLLFCTTGILLRRILDVSNISDLSHIIIDEVHER 759
Score = 177 (67.4 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 50/117 (42%), Positives = 68/117 (58%)
Query: 116 ILVFLTGQEEI-ETCNEILQDRVRRLGSKIKELI-ILPVYSNL-PTDMQTKIFLPTPPNA 172
ILVF+ G +I E C+ L + I + I +P++S+L P D Q K+F P
Sbjct: 900 ILVFVPGLSDILELCSR-LGKPISTFTEAICQRIWCVPLHSSLSPKDQQ-KVFEKAPNGR 957
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
KVV+ATNIAETS+TI+++ V+D G Q FNS TG ++ SKAS QRAG
Sbjct: 958 VKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAG 1014
Score = 170 (64.9 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 55/181 (30%), Positives = 92/181 (50%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R L +++ S +IIDE HER+ D L ++++I+ R DLK+++ SATL+
Sbjct: 731 TTGILLRRILDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLN 790
Query: 62 AQKFSEFFD--DAPVFRIPGRRFPV-DIYYTKA-P-----EADYIDACVVSILQIHATQP 112
A++ + +F D +F IPG FPV +IY + P +Y D+ + + T
Sbjct: 791 AKQIANYFKCTDDSIFSIPGFTFPVKNIYINEVLPLINKYNPNYKDS-ITTTTTTTTTTT 849
Query: 113 LGDILVFLTGQEEIETCNEIL-QDRV----RRLGSKIKELIILPVYSN-LPTDMQTKIFL 166
D T ++E E N L Q ++ +R+ + E +IL + + L D +F+
Sbjct: 850 TND-----TNEDEEEILNNKLNQLKISIDQKRINLDVVESLILHLVNGVLKKDKSILVFV 904
Query: 167 P 167
P
Sbjct: 905 P 905
Score = 76 (31.8 bits), Expect = 3.1e-14, Sum P(4) = 3.1e-14
Identities = 18/72 (25%), Positives = 38/72 (52%)
Query: 1133 DSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWADA--DFST-QWCYENFIQHRSMKRARD 1189
D T + M K +++ DH L+N YN W + D + Q+C EN++ +++ +D
Sbjct: 1157 DKTIRPMDKFSSPNQS----DHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQD 1212
Query: 1190 VREQLIGLVQRV 1201
++ Q + ++ +
Sbjct: 1213 LKLQFVEILSEI 1224
Score = 70 (29.7 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 1063 LSKSGSYKTAKHNQTVMIHPNSSLFEELPRWV----LYHELVFTTKEFMRQVTEIESKWL 1118
L+K + K + V IHP S+ F+E WV +Y++ V T+K F+ +T + L
Sbjct: 1315 LTKPPNCGPGKPLERVFIHPRSTNFKE-GEWVYPFIIYNDKVKTSKLFLHHITNLSPLTL 1373
Query: 1119 L 1119
L
Sbjct: 1374 L 1374
Score = 70 (29.7 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 1230 LSKSGSYKTAKHNQTVMIHPNSSLFEELPRWV----LYHELVFTTKEFMRQVTEIESKWL 1285
L+K + K + V IHP S+ F+E WV +Y++ V T+K F+ +T + L
Sbjct: 1315 LTKPPNCGPGKPLERVFIHPRSTNFKE-GEWVYPFIIYNDKVKTSKLFLHHITNLSPLTL 1373
Query: 1286 L 1286
L
Sbjct: 1374 L 1374
Score = 38 (18.4 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 617 KDREHQEQYELLLDNQIDF 635
+ ++ +E+ LLL+ Q+ F
Sbjct: 175 ESKQEEEKQRLLLEQQLKF 193
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 301 (111.0 bits), Expect = 6.3e-32, Sum P(2) = 6.3e-32
Identities = 95/347 (27%), Positives = 156/347 (44%)
Query: 780 DLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXX 839
++A S+ I D VYVID G K+ +++ GMESL +S+A+A Q
Sbjct: 238 NIAETSITIDDV----VYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVA 293
Query: 840 XXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI---NDLIH-FDFLDPPPH 895
CF L+T+ Y H+L +PEIQR+ L L +K L + ++L F L PPH
Sbjct: 294 SGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPH 353
Query: 896 -ETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIAS 954
++L + +L LGAL LT LG +A P+D +GK++L ++C++ +TIA+
Sbjct: 354 TDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAA 413
Query: 955 MLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWA-----DADFSTQWCYE 1009
L+ F P DK A+ + F D+L LL Y W S +C +
Sbjct: 414 SLAFKSP-FVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQ 472
Query: 1010 NFIQHRSMKRARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSY 1069
NF+ R ++ ++ Q L+ + + R G + + S +
Sbjct: 473 NFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAE 532
Query: 1070 --KTAKHNQTVMIHPNSSLFEELPR-WVLYHELVFTTKEFMRQVTEI 1113
K ++PN ++LYHE + T++ F+R + +
Sbjct: 533 NPKLISAMLCAALYPNVVQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 579
Score = 228 (85.3 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 51/135 (37%), Positives = 81/135 (60%)
Query: 95 DYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYS 154
+ I+A + I+ + P G ILVFL G EI+ E LQ + +I P++S
Sbjct: 153 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 212
Query: 155 NLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESL 214
+L ++ Q +F+ P K++++TNIAETS+TID+++YVID G K+ +++ GMESL
Sbjct: 213 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 272
Query: 215 TVVPISKASANQRAG 229
+S+A+A QR G
Sbjct: 273 EDTFVSQANALQRKG 287
Score = 136 (52.9 bits), Expect = 6.3e-32, Sum P(2) = 6.3e-32
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 35 DILFGLVKDIVRFRSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYY 88
D L ++KDIV R L++++ SATL+A+ FS++F+ PV IPGR FPVD ++
Sbjct: 2 DFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFF 55
Score = 63 (27.2 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 30/157 (19%), Positives = 57/157 (36%)
Query: 1132 EDSTNKKMPKTLGKSRAELGGDHLVLLNIYNQWA-----DADFSTQWCYENFIQHRSMKR 1186
E++ KK+ S D+L LL Y W S +C +NF+ R ++
Sbjct: 429 EEANQKKLEFAFANS------DYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQE 482
Query: 1187 ARDVREQLIGLVQRVEMELVSNPTETVNIRKAITAGYFYHIAKLSKSGSY--KTAKHNQT 1244
++ Q L+ + + R G + + S + K
Sbjct: 483 MASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLC 542
Query: 1245 VMIHPNSSLFEELPR-WVLYHELVFTTKEFMRQVTEI 1280
++PN ++LYHE + T++ F+R + +
Sbjct: 543 AALYPNVVQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 579
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 263 (97.6 bits), Expect = 1.1e-31, Sum P(4) = 1.1e-31
Identities = 75/255 (29%), Positives = 126/255 (49%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ ++ ++A S+ I D VYVID G K+N +N + + S+ IS+A+A Q
Sbjct: 973 RKVIAATNIAETSITIDDV----VYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRT 1028
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
CF LYT + ++ + VPE+ R+ L L +K LG+ + F L
Sbjct: 1029 GRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRAL 1088
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
+PP + A+ L+ +GA+ +LT LG +A+ P+D ++GKMLL + C+ I+
Sbjct: 1089 EPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPIL 1148
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADADFSTQW-CYE 1009
+IA+ LS Y PKD+ + D R +L + + ++ N +D Y+
Sbjct: 1149 SIAAFLSYKSPFIY-PKDEKQNVD--RVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYD 1205
Query: 1010 NFI---QHRSMKRAR 1021
++ Q R MK A+
Sbjct: 1206 KWVKILQERGMKAAQ 1220
Score = 217 (81.4 bits), Expect = 8.0e-22, Sum P(3) = 8.0e-22
Identities = 53/126 (42%), Positives = 74/126 (58%)
Query: 104 ILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTK 163
I I T G IL+FL G EI ++L R G L LP++S++ + Q K
Sbjct: 906 ICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL--LPLHSSIASSEQRK 963
Query: 164 IFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKAS 223
+FL P RKV+ ATNIAETS+TID+++YVID G K+N +N + + S+ IS+A+
Sbjct: 964 VFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQAN 1023
Query: 224 ANQRAG 229
A QR G
Sbjct: 1024 ARQRTG 1029
Score = 188 (71.2 bits), Expect = 1.1e-31, Sum P(4) = 1.1e-31
Identities = 50/168 (29%), Positives = 83/168 (49%)
Query: 635 FIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGET 694
+I+A L R + ++ T+K K L +T+ +LPI K ++ +++ VL++ GET
Sbjct: 583 YIEAECLSLQRKQENKKRTQKYKDML---KTRTALPISEVKNGILQHLKEKDVLVVCGET 639
Query: 695 GSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEEMGVKL-GCE---V 747
GSGKTTQ+PQ++ + I CTQP +E G + V
Sbjct: 640 GSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGLDDSLV 699
Query: 748 GYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
GY +R E S++T + + T G L R+ + L + +I+DE H +
Sbjct: 700 GYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHER 747
Score = 134 (52.2 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS-D-----LKLLI 55
T G L R+ + L + +I+DE HER+L D L ++K ++ +S D LK+++
Sbjct: 719 TTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVIL 778
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYY 88
SAT+DA FS +F PV GR PV ++
Sbjct: 779 MSATVDADLFSRYFGHCPVITAQGRTHPVTTHF 811
Score = 54 (24.1 bits), Expect = 1.1e-31, Sum P(4) = 1.1e-31
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 1153 DHLVLLNIYNQWADA------DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1206
DHL+++ Y++W + ++C F+ M+ RD+R Q L+ ++ L+
Sbjct: 1196 DHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLL--ADIGLI 1253
Query: 1207 SNP 1209
+ P
Sbjct: 1254 NLP 1256
Score = 54 (24.1 bits), Expect = 8.0e-22, Sum P(3) = 8.0e-22
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 986 DHLVLLNIYNQWADA------DFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1039
DHL+++ Y++W + ++C F+ M+ RD+R Q L+ ++ L+
Sbjct: 1196 DHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLL--ADIGLI 1253
Query: 1040 SNP 1042
+ P
Sbjct: 1254 NLP 1256
Score = 42 (19.8 bits), Expect = 1.1e-31, Sum P(4) = 1.1e-31
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 501 IPKLRIESRRKYLEKRKEDKVAELEAD 527
IP I S + LE +KE+K+ EL ++
Sbjct: 367 IPPSEI-SPHELLELQKEEKMRELRSE 392
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 383 (139.9 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 101/272 (37%), Positives = 147/272 (54%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVR-FRSDLKLLISSAT 59
+T+G L R +P+L+ ++I+DE HER+L D+ L+ D+ + R DLKLLI SAT
Sbjct: 99 VTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSAT 158
Query: 60 LDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEAD-YIDACVVSILQIHATQPLGDILV 118
LD + + +APV GR FPV+ Y P + DA V+ ++ Q G +L+
Sbjct: 159 LDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEM-LRQESGSLLL 217
Query: 119 FLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLA 178
FL G EI+ E L R+ GS ++++ P+Y L + Q K LP P RKVVLA
Sbjct: 218 FLPGVGEIQRVQEQLASRI---GS---DVLLCPLYGALSLNDQRKAILPAPQGMRKVVLA 271
Query: 179 TNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLS 238
TNIAETSLTI+ I V+D + F+ RTG+ L +S+AS QRAG P
Sbjct: 272 TNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEP-- 329
Query: 239 DFRGCA-HVLGEEVLRGCAHVLGEEVLRPEVS 269
G + H++ +E A E+L+ ++S
Sbjct: 330 ---GISLHLIAKEQAERAAAQSEPEILQSDLS 358
Score = 141 (54.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 668 SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIP-QYLHEAGFTKDKMKIGCTQPXXX 726
SLP+ +L+ A+ +++ TG+GK+T +P Q L G KI +P
Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGING---KIILLEPRRL 59
Query: 727 XXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSV 786
E + K G VGY +R ++C T ++ +T+G L R +P+L+ +
Sbjct: 60 AARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGL 119
Query: 787 MIIDEAHPK 795
+I+DE H +
Sbjct: 120 VILDEFHER 128
Score = 114 (45.2 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 44/162 (27%), Positives = 70/162 (43%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
V+D + F+ RTG+ L +S+AS Q L A
Sbjct: 287 VVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLI-AKEQAERAA 345
Query: 858 DNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGD- 916
+ PEI + +L ++ L G +D +LD PP L+ A L LGAL G+
Sbjct: 346 AQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALE--GER 403
Query: 917 LTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSV 958
L+ G++MA DP + ML+++ K +E T A + ++
Sbjct: 404 LSAQGQKMAALGNDPRLAAMLVSA---KNDDEAATAAKIAAI 442
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 233 (87.1 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 75/273 (27%), Positives = 126/273 (46%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S + ID+ VYVID G K+ +++ + +L +SKA+A Q
Sbjct: 609 RKIVLATNIAE-SAVTIDDV---VYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQ 664
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALG----INDLIHFD 888
C+ LY+ + D VPEI+R+ + L +K L ND +
Sbjct: 665 GRAGRCQPGICYHLYSRLRAA-SMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQ-K 722
Query: 889 FLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEE 948
LDPP +++ AL L +GAL +LT+LG + P+ P++ KML + C++
Sbjct: 723 LLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDP 782
Query: 949 IVTIASMLSVNGAIFYRPKDKIIH--ADTARKNFFML-GGD--HLVLLNIYNQWADAD-- 1001
+T+A F P + A A+ L GGD HL ++ + W +A
Sbjct: 783 ALTLACAADYKEP-FTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGR 841
Query: 1002 -FSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
S ++C + F+ +MK +R QL ++R
Sbjct: 842 GLSAEFCSQYFVSPSAMKMLDQMRSQLESELKR 874
Score = 212 (79.7 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 49/147 (33%), Positives = 74/147 (50%)
Query: 654 EKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYL--HEAGF 711
+K K I + + LPI FK + AV +QV++I GETG GKTTQ+PQYL H
Sbjct: 172 KKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSS 231
Query: 712 TKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
++ KI CTQP E G +G +GY +R + + + + T+G L
Sbjct: 232 KRETCKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGIL 291
Query: 772 HREFLSEPDLASYSVM---IIDEAHPK 795
R + + ++S S + I+DE H +
Sbjct: 292 LRVLVGKGSVSSVSDITHIIVDEIHER 318
Score = 201 (75.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 60/172 (34%), Positives = 96/172 (55%)
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY-TKAPEADYIDACVVSIL--QIHATQPLGDILV 118
AQ E D++ G++ +D Y T PE +D ++ L +I G ILV
Sbjct: 500 AQIIREHADNSQSNSQQGQQL-LDKYMATINPEQ--VDVSLIQQLMRKICGDSEDGAILV 556
Query: 119 FLTGQEEI-ETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVL 177
FL G ++I +T +L++ +K ++I L +S +P Q K+F PP RK+VL
Sbjct: 557 FLPGWDDINKTRQRLLENPFFADSAKF-DIICL--HSMVPAGEQKKVFNRPPPGCRKIVL 613
Query: 178 ATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
ATNIAE+++TID+++YVID G K+ +++ + +L +SKA+A QR G
Sbjct: 614 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQG 665
Score = 166 (63.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 33/90 (36%), Positives = 56/90 (62%)
Query: 2 TDGTLHREFLSEPDLASYSVM---IIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSA 58
T+G L R + + ++S S + I+DE HER ++D + +++D++ L+L++ SA
Sbjct: 287 TNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSA 346
Query: 59 TLDAQKFSEFFDDAPVFRIPGRRFPVDIYY 88
TLDA++FS +F PV R+PG +PV Y
Sbjct: 347 TLDAERFSGYFGGCPVVRVPGFTYPVRTLY 376
Score = 70 (29.7 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 28/111 (25%), Positives = 47/111 (42%)
Query: 1097 HELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKTLGKSR-AEL-GGD- 1153
H L+ F V ++ L A Y +P + S ++ K A L GGD
Sbjct: 764 HPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDS 823
Query: 1154 -HLVLLNIYNQWADAD---FSTQWCYENFIQHRSMKRARDVREQLIGLVQR 1200
HL ++ + W +A S ++C + F+ +MK +R QL ++R
Sbjct: 824 DHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKR 874
Score = 42 (19.8 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 463 KNRDKNNTKNVATSRQDK 480
K+R KN KN A + +K
Sbjct: 80 KSRHKNGNKNEANEKSNK 97
Score = 40 (19.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 446 TDSDDDRKERDEFSERLKNRDKNNTKNVATSRQD 479
+DSDD +E ++ E N ++ N D
Sbjct: 991 SDSDDSNEEEEDDEEVAANTNEEVAANTNEEGMD 1024
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 243 (90.6 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 83/303 (27%), Positives = 143/303 (47%)
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVIDPGFC--KQNNFNSRTGMESLTVVPISKASAN 829
+R+ + ++A SV + D YVID FC +Q + T L + SK S N
Sbjct: 399 YRKIILSTNIAESSVTVPDVK----YVID--FCLVRQLACDKETNYRCLRITWASKTSCN 452
Query: 830 QXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGIND--LIHF 887
Q C+RL T +++E+ + ++PE+ R L + +L +K L + D +
Sbjct: 453 QRRGRAGRVSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLS 512
Query: 888 DFLDPP---PHETLVLALEQLYALGALNHH-----GDLTKLGRRMAEFPLDPMMGKMLLA 939
L PP E VL L+Q+ AL ++ GDLT LGR +A+ P+D +GK+++
Sbjct: 513 TALTPPILGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVL 572
Query: 940 SEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFM-LGGDHLVLLNIYNQW- 997
+ C+EE + IA+ LS+ + F P + + ++ +F + D + +N + W
Sbjct: 573 GHVFGCLEECLIIAASLSLK-SFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWY 631
Query: 998 ---ADADF-----STQWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS--NPTETVN 1047
A + +W EN IQ + ++ ++ E L V R M + S NPT+ +
Sbjct: 632 TSRAKGELRHPKDELEWGKENCIQIKRIREVAELFEDLKKRVSRFNMHISSSSNPTDYTS 691
Query: 1048 IRK 1050
+ K
Sbjct: 692 LHK 694
Score = 192 (72.6 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 44/133 (33%), Positives = 68/133 (51%)
Query: 669 LPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKD-KMKIGCTQPXXXX 727
LPI +Q+L+ + ++ V+II G TGSGKTTQ+PQ++ + ++ + TQP
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAERNIPCNLVVTQPRKIG 148
Query: 728 XXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVM 787
E LG VGY + E +E T + Y+T G L ++ +S L YS +
Sbjct: 149 ATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYSHI 208
Query: 788 IIDEAHPKVYVID 800
IDE H + +D
Sbjct: 209 FIDEVHERSEELD 221
Score = 182 (69.1 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 48/123 (39%), Positives = 67/123 (54%)
Query: 110 TQP-LGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPT 168
T P G +LVFL G EI+ E L VR K L + P++S + + Q +FL
Sbjct: 342 THPERGSVLVFLPGLAEIQYMKEALSKLVR------KRLQVYPLHSTVTLEEQNGVFLVP 395
Query: 169 PPNARKVVLATNIAETSLTIDNIIYVIDPGFC--KQNNFNSRTGMESLTVVPISKASANQ 226
P RK++L+TNIAE+S+T+ ++ YVID FC +Q + T L + SK S NQ
Sbjct: 396 VPGYRKIILSTNIAESSVTVPDVKYVID--FCLVRQLACDKETNYRCLRITWASKTSCNQ 453
Query: 227 RAG 229
R G
Sbjct: 454 RRG 456
Score = 128 (50.1 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-LKLLISSAT 59
+T G L ++ +S L YS + IDE HER+ D L +V+ ++R S +K+++ SAT
Sbjct: 187 VTTGVLLQKLVSSKTLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSAT 246
Query: 60 LDAQKFSEFF--------DDAPVFRIPGRRFPVDIYY 88
++ +F+E+F + A VF + G + V+ YY
Sbjct: 247 INCIEFAEYFGSPIRNQMNPAYVFEVEGAPYAVEEYY 283
Score = 60 (26.2 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 1172 QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVS--NPTETVNIRK 1217
+W EN IQ + ++ ++ E L V R M + S NPT+ ++ K
Sbjct: 647 EWGKENCIQIKRIREVAELFEDLKKRVSRFNMHISSSSNPTDYTSLHK 694
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 246 (91.7 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 79/290 (27%), Positives = 136/290 (46%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID G K+N +N + S+ +SKA+A Q
Sbjct: 940 RKVIIATNIAETSITIEDV----VYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRM 995
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFL 890
CF LYT ++ + VPE+ R+ L L +K LG+ + F L
Sbjct: 996 GRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKAL 1055
Query: 891 DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
+PP + A+ L+ +GAL +LT LG +A+ P+D ++GKMLL + C+ I+
Sbjct: 1056 EPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPIL 1115
Query: 951 TIASMLSVNGAIFYRPKDK--------IIHADTARKNFFMLGGD----HLVLLNIYNQWA 998
+IA+ LS + F KD+ + +D + + D HL+++ Y +W
Sbjct: 1116 SIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWV 1175
Query: 999 ----DADFST--QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELVSNP 1042
+ F +C F+ M+ R+ R + G++ ++ L++ P
Sbjct: 1176 RILHEQGFKAAESFCESKFLNSSVMRMMRERRVEF-GMLL-ADIGLINLP 1223
Score = 223 (83.6 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 58/144 (40%), Positives = 79/144 (54%)
Query: 86 IYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIK 145
I Y + DY D I I T G ILVFL G EI L R G+
Sbjct: 856 IKYIASAVVDY-DLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGD 914
Query: 146 ELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNF 205
L LP++S++ + Q K+FL P RKV++ATNIAETS+TI++++YVID G K+N +
Sbjct: 915 WL--LPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRY 972
Query: 206 NSRTGMESLTVVPISKASANQRAG 229
N + S+ +SKA+A QR G
Sbjct: 973 NPHKKLSSMVEDWVSKANARQRMG 996
Score = 186 (70.5 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 44/153 (28%), Positives = 79/153 (51%)
Query: 647 KGEEEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYL 706
K ++E +K +K ++ +T+ +LPI K+D++ +++ VL++ GETGSGKTTQ+PQ++
Sbjct: 575 KQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFI 634
Query: 707 HEAGFTKDK---MKIGCTQPXXXXXXXXXXXXXEEMGVKL-GCEVGYAIRFEDCTSERTI 762
+ I CTQP E V Y +R ++ S++T
Sbjct: 635 LDDMIDSGHGGYCNIICTQPRAITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTR 694
Query: 763 IKYMTDGTLHREFLSEPDLASYSVMIIDEAHPK 795
+ + T G L R+ + + L + +I+DE H +
Sbjct: 695 LLFCTTGILLRKLVGDTTLKDVTHIIVDEVHER 727
Score = 147 (56.8 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 33/93 (35%), Positives = 53/93 (56%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRS-D-----LKLLI 55
T G L R+ + + L + +I+DE HER+L D L ++K ++ +S D LK+++
Sbjct: 699 TTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVIL 758
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYY 88
SAT+DA +FS +F P+ GR PV Y+
Sbjct: 759 MSATVDAHQFSRYFGQCPIITAQGRTHPVTTYF 791
Score = 45 (20.9 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 1153 DHLVLLNIYNQWA----DADFST--QWCYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1206
DHL+++ Y +W + F +C F+ M+ R+ R + G++ ++ L+
Sbjct: 1163 DHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEF-GMLL-ADIGLI 1220
Query: 1207 SNP 1209
+ P
Sbjct: 1221 NLP 1223
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 254 (94.5 bits), Expect = 4.6e-30, Sum P(3) = 4.6e-30
Identities = 78/278 (28%), Positives = 131/278 (47%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D + V+D G K+ ++++ M L S A+ Q
Sbjct: 939 RKVVVATNVAETSITIDDI----IVVVDTGKVKETSYDAANNMRRLEETFASLAACKQRR 994
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDP 892
+C++LYT + ++ + PE++R+ L L ++A+GI D+ F P
Sbjct: 995 GRAGRVQAGECYKLYTR-KLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLARAP 1053
Query: 893 PPHETLVL--ALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIV 950
P E + A+ L +G L+ +LT LGR++A P D GK+++ + C+E+ V
Sbjct: 1054 TPPEAAAVEGAITMLRRMGCLDGE-ELTALGRQLAAIPADLRCGKLMVYGAVFGCLEDCV 1112
Query: 951 TIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWADA---DFSTQ-- 1005
++A++LS +F P DK A AR F GD L L + W DA D S Q
Sbjct: 1113 SVAALLSSGRGVFVSPPDKRDQAREARARFAAGDGDLLTDLRAFQAW-DAMMRDPSVQQR 1171
Query: 1006 ----WCYENFIQHRSMKRARDVREQLIGLVQRVEMELV 1039
+C +NF+ + ++ R Q VE+ LV
Sbjct: 1172 HVRSFCDDNFLSYLTLSDVASARTQYF--TSLVELGLV 1207
Score = 200 (75.5 bits), Expect = 2.7e-24, Sum P(3) = 2.7e-24
Identities = 49/124 (39%), Positives = 71/124 (57%)
Query: 106 QIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIF 165
++ Q G IL+FL G EI +L R L L +LP++++L T Q K+F
Sbjct: 880 ELSLAQKSGGILIFLPGVAEINRACGML----RSLNC----LHVLPLHASLETKEQRKVF 931
Query: 166 LPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASAN 225
+P P RKVV+ATN+AETS+TID+II V+D G K+ ++++ M L S A+
Sbjct: 932 VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACK 991
Query: 226 QRAG 229
QR G
Sbjct: 992 QRRG 995
Score = 166 (63.5 bits), Expect = 4.6e-30, Sum P(3) = 4.6e-30
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 16 LASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLDAQKFSEFF--DDAP 73
LA S ++IDE HER+L TD L +++D+++ R DLKL++ SATLD+ F+ +F D
Sbjct: 756 LADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYFVQDGIR 815
Query: 74 V--FRIPGRRFPVDIYY 88
V I GR FPV YY
Sbjct: 816 VGQVEIAGRTFPVTDYY 832
Score = 165 (63.1 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 51/168 (30%), Positives = 78/168 (46%)
Query: 642 PGNRDKGE---EEMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGK 698
P + K E + T + +K L ++ LP + + +++ V +HQV II GETGSGK
Sbjct: 606 PDSASKNEWLRRQETPEYRKMLG---QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGK 662
Query: 699 TTQIPQYLHEAGFTKD---KMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFED 755
+TQ Q++ + + + I TQP +E ++G EVGY IR E
Sbjct: 663 STQSVQFILDDLYGRGLGHAANILVTQPRRISALGLADRVSDERCSQVGQEVGYIIRGES 722
Query: 756 CTSERTIIKYMTDGTLHREFLSE--------PDLASYSVMIIDEAHPK 795
T +T I ++T G L R LA S ++IDE H +
Sbjct: 723 RTGPKTRITFVTTGVLLRRLQVSGGRVEDVVASLADVSHVVIDEVHER 770
Score = 63 (27.2 bits), Expect = 4.6e-30, Sum P(3) = 4.6e-30
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 1240 KHNQTVMIHPNSSLFEEL-----PRWVLYHELVFTTKEFMRQVTEIESKWLL 1286
+ N V +HP+S+LF+ ++ Y ++ T+K F+R +T + LL
Sbjct: 1278 QENGRVFVHPSSTLFDSQGFSGNAAFLSYFSIISTSKVFVRDLTPFNAYTLL 1329
Score = 63 (27.2 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 1073 KHNQTVMIHPNSSLFEEL-----PRWVLYHELVFTTKEFMRQVTEIESKWLL 1119
+ N V +HP+S+LF+ ++ Y ++ T+K F+R +T + LL
Sbjct: 1278 QENGRVFVHPSSTLFDSQGFSGNAAFLSYFSIISTSKVFVRDLTPFNAYTLL 1329
Score = 37 (18.1 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 11/56 (19%), Positives = 28/56 (50%)
Query: 124 EEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKI-FLPTPPNARKVVLA 178
EE+E+ + + R + ++ IL V + +++T + F +P +++L+
Sbjct: 461 EEMESLESVFGELFTRPSPDVCQIRILDVENGPNKNVETHLQFRKSPNYPNQLILS 516
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 251 (93.4 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 88/348 (25%), Positives = 161/348 (46%)
Query: 759 ERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESL 818
+++I K G R+ + ++A S+ I D V VID G K F+ + L
Sbjct: 862 QKSIFKTAPKGK--RKVVVSTNIAETSITIPD----CVAVIDTGKSKNLFFDHKLNTTKL 915
Query: 819 TVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKA 878
S+A Q C+ LYT ++ ++ +PEI+R L N L++K+
Sbjct: 916 IESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFE-AMQKQPIPEIKRTRLENLYLVVKS 974
Query: 879 LGINDLIHF--DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKM 936
+GI+++ F LD P +L A + L+ +GAL + LTKLG ++ P DP K+
Sbjct: 975 MGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENS-LTKLGNYISYLPTDPQSAKL 1033
Query: 937 LLASEKYKCVEEIVTIASMLSVNGAIF---YRPKDKIIHADTARKNFFMLGGDHLVLLNI 993
L+ + C++ +T+A+ +S G+ F Y +DK+ +K F GD + + N
Sbjct: 1034 LILGCIFGCLDICLTLAA-ISSTGSPFINSYEQRDKL---KQIQKKFGNGQGDFISMANA 1089
Query: 994 YNQWADADFSTQWCYENFIQHRSMKRARDVREQLI------GLVQRVEMELVSNPTETVN 1047
YN + ++ S ++ EN++ + ++K R Q + G V R + + E
Sbjct: 1090 YNAYM-SNKSKRFLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWP 1148
Query: 1048 IRKAITAGYFY-HIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWV 1094
+ + I AG FY +A++ + ++ I P++ ++ W+
Sbjct: 1149 LIRGIIAGAFYPQVARIQYPDPKYFKSSSGSIEIDPDA---RQIKFWI 1193
Score = 198 (74.8 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 646 DKGEEEMTEKQKKKLNIEETKK------SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKT 699
DK E + E KK+ + +E K+ LP + ++ L+ A+ QV +I GETGSGK+
Sbjct: 544 DKDIELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKS 603
Query: 700 TQIPQYLHEAGFTKDKM--KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCT 757
TQ+ Q++ + ++K KI CTQP +E ++G E GY IR E+ T
Sbjct: 604 TQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKT 663
Query: 758 SERTIIKYMTDGTLHREFLSEPD---LASYSVMIIDEAHPK 795
S T I + T G L R S L + ++IDE H +
Sbjct: 664 SSNTRITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHER 704
Score = 159 (61.0 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 52/150 (34%), Positives = 73/150 (48%)
Query: 85 DIYYTKAPEADY-IDACVVSILQIHATQPL---GDILVFLTGQEEIE-TCNEILQDRVRR 139
D ++ K+ +Y + A V + TQ G IL+FL G EI T EI +
Sbjct: 788 DSHFYKSGNLNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINK----- 842
Query: 140 LGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGF 199
S + + LP++S L + Q IF P RKVV++TNIAETS+TI + + VID G
Sbjct: 843 --SSDNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGK 900
Query: 200 CKQNNFNSRTGMESLTVVPISKASANQRAG 229
K F+ + L S+A QR G
Sbjct: 901 SKNLFFDHKLNTTKLIESWCSQAEVRQRRG 930
Score = 123 (48.4 bits), Expect = 9.2e-23, Sum P(3) = 9.2e-23
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 2 TDGTLHREFLSEPD---LASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSA 58
T G L R S L + ++IDE HER++ D L L+K +++ LK+++ SA
Sbjct: 673 TTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSA 732
Query: 59 TLDAQKFSEFFDDAPV--FRIPGRRFPVDIYYTKA--PEADY 96
T+ F FF+ P+ I GR +P+ +Y + E++Y
Sbjct: 733 TISVDTFINFFEK-PLTPLHIEGRTYPIQDFYLDSILAESEY 773
Score = 69 (29.3 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 27/132 (20%), Positives = 58/132 (43%)
Query: 1137 KKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLI- 1195
K++ K G + GD + + N YN + ++ S ++ EN++ + ++K R Q +
Sbjct: 1070 KQIQKKFGNGQ----GDFISMANAYNAYM-SNKSKRFLTENYLSYTTIKDITSTRSQYLS 1124
Query: 1196 -----GLVQRVEMELVSNPTETVNIRKAITAGYFY-HIAKLSKSGSYKTAKHNQTVMIHP 1249
G V R + + E + + I AG FY +A++ + ++ I P
Sbjct: 1125 LLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVARIQYPDPKYFKSSSGSIEIDP 1184
Query: 1250 NSSLFEELPRWV 1261
++ ++ W+
Sbjct: 1185 DA---RQIKFWI 1193
Score = 49 (22.3 bits), Expect = 3.4e-13, Sum P(4) = 3.4e-13
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 1250 NSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNK 1304
N+ + + R++ + L +TT ++ +T S++L + + R+L+DS NK
Sbjct: 1091 NAYMSNKSKRFLTENYLSYTT---IKDITSTRSQYLSLLVELGFVNRKLDDSCNK 1142
Score = 49 (22.3 bits), Expect = 1.1e-12, Sum P(5) = 1.1e-12
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 1083 NSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNK 1137
N+ + + R++ + L +TT ++ +T S++L + + R+L+DS NK
Sbjct: 1091 NAYMSNKSKRFLTENYLSYTT---IKDITSTRSQYLSLLVELGFVNRKLDDSCNK 1142
Score = 43 (20.2 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 28/116 (24%), Positives = 50/116 (43%)
Query: 560 EHDKARELEKVQRY--YMPKGTKGPXXXXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGAK 617
E+ K +EL ++ Y Y PK T +Y + + + IFR
Sbjct: 100 ENPKTKELIPIKFYPNYSPKETTNEARHMVATFVLHRINYIKNM---KMLLPIIFRDYWN 156
Query: 618 DREHQEQYELLLDN-QIDFIQALSLP-----GNRDKGEEEMTEKQKKKLNIEETKK 667
+ E E+ +LL +N ++ + + P R+ E++ E+Q K+ N +TKK
Sbjct: 157 ELE-DERLKLLKENKELHDKRYNTNPFTVYLQQRENEEKKAKERQIKEQNELKTKK 211
Score = 42 (19.8 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 447 DSDDDRKERDEFSERLKNRDK 467
+S RK DEF E L R K
Sbjct: 552 ESYKKRKHSDEFKEMLIQRSK 572
Score = 38 (18.4 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 1078 VMIHPNSSLFEE 1089
V IHP+S LF +
Sbjct: 1204 VFIHPSSVLFND 1215
Score = 38 (18.4 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 1245 VMIHPNSSLFEE 1256
V IHP+S LF +
Sbjct: 1204 VFIHPSSVLFND 1215
Score = 38 (18.4 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 9/42 (21%), Positives = 22/42 (52%)
Query: 94 ADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQD 135
A+YI +V L + T +G +++ + + N+I+++
Sbjct: 469 ANYIKLAIVRELLKYLTDHIGQCMIYTIFEWLNDHVNKIIEN 510
Score = 37 (18.1 bits), Expect = 3.4e-13, Sum P(4) = 3.4e-13
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 322 KRKSSEYKVGNGEDSFC-VSPLYN 344
K K + K GNG+ F ++ YN
Sbjct: 1068 KLKQIQKKFGNGQGDFISMANAYN 1091
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 251 (93.4 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 88/348 (25%), Positives = 161/348 (46%)
Query: 759 ERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESL 818
+++I K G R+ + ++A S+ I D V VID G K F+ + L
Sbjct: 862 QKSIFKTAPKGK--RKVVVSTNIAETSITIPD----CVAVIDTGKSKNLFFDHKLNTTKL 915
Query: 819 TVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKA 878
S+A Q C+ LYT ++ ++ +PEI+R L N L++K+
Sbjct: 916 IESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFE-AMQKQPIPEIKRTRLENLYLVVKS 974
Query: 879 LGINDLIHF--DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKM 936
+GI+++ F LD P +L A + L+ +GAL + LTKLG ++ P DP K+
Sbjct: 975 MGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENS-LTKLGNYISYLPTDPQSAKL 1033
Query: 937 LLASEKYKCVEEIVTIASMLSVNGAIF---YRPKDKIIHADTARKNFFMLGGDHLVLLNI 993
L+ + C++ +T+A+ +S G+ F Y +DK+ +K F GD + + N
Sbjct: 1034 LILGCIFGCLDICLTLAA-ISSTGSPFINSYEQRDKL---KQIQKKFGNGQGDFISMANA 1089
Query: 994 YNQWADADFSTQWCYENFIQHRSMKRARDVREQLI------GLVQRVEMELVSNPTETVN 1047
YN + ++ S ++ EN++ + ++K R Q + G V R + + E
Sbjct: 1090 YNAYM-SNKSKRFLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWP 1148
Query: 1048 IRKAITAGYFY-HIAKLSKSGSYKTAKHNQTVMIHPNSSLFEELPRWV 1094
+ + I AG FY +A++ + ++ I P++ ++ W+
Sbjct: 1149 LIRGIIAGAFYPQVARIQYPDPKYFKSSSGSIEIDPDA---RQIKFWI 1193
Score = 198 (74.8 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 646 DKGEEEMTEKQKKKLNIEETKK------SLPIYPFKQDLIDAVRDHQVLIIEGETGSGKT 699
DK E + E KK+ + +E K+ LP + ++ L+ A+ QV +I GETGSGK+
Sbjct: 544 DKDIELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKS 603
Query: 700 TQIPQYLHEAGFTKDKM--KIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCT 757
TQ+ Q++ + ++K KI CTQP +E ++G E GY IR E+ T
Sbjct: 604 TQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKT 663
Query: 758 SERTIIKYMTDGTLHREFLSEPD---LASYSVMIIDEAHPK 795
S T I + T G L R S L + ++IDE H +
Sbjct: 664 SSNTRITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHER 704
Score = 159 (61.0 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 52/150 (34%), Positives = 73/150 (48%)
Query: 85 DIYYTKAPEADY-IDACVVSILQIHATQPL---GDILVFLTGQEEIE-TCNEILQDRVRR 139
D ++ K+ +Y + A V + TQ G IL+FL G EI T EI +
Sbjct: 788 DSHFYKSGNLNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINK----- 842
Query: 140 LGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGF 199
S + + LP++S L + Q IF P RKVV++TNIAETS+TI + + VID G
Sbjct: 843 --SSDNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGK 900
Query: 200 CKQNNFNSRTGMESLTVVPISKASANQRAG 229
K F+ + L S+A QR G
Sbjct: 901 SKNLFFDHKLNTTKLIESWCSQAEVRQRRG 930
Score = 123 (48.4 bits), Expect = 9.2e-23, Sum P(3) = 9.2e-23
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 2 TDGTLHREFLSEPD---LASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSA 58
T G L R S L + ++IDE HER++ D L L+K +++ LK+++ SA
Sbjct: 673 TTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSA 732
Query: 59 TLDAQKFSEFFDDAPV--FRIPGRRFPVDIYYTKA--PEADY 96
T+ F FF+ P+ I GR +P+ +Y + E++Y
Sbjct: 733 TISVDTFINFFEK-PLTPLHIEGRTYPIQDFYLDSILAESEY 773
Score = 69 (29.3 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 27/132 (20%), Positives = 58/132 (43%)
Query: 1137 KKMPKTLGKSRAELGGDHLVLLNIYNQWADADFSTQWCYENFIQHRSMKRARDVREQLI- 1195
K++ K G + GD + + N YN + ++ S ++ EN++ + ++K R Q +
Sbjct: 1070 KQIQKKFGNGQ----GDFISMANAYNAYM-SNKSKRFLTENYLSYTTIKDITSTRSQYLS 1124
Query: 1196 -----GLVQRVEMELVSNPTETVNIRKAITAGYFY-HIAKLSKSGSYKTAKHNQTVMIHP 1249
G V R + + E + + I AG FY +A++ + ++ I P
Sbjct: 1125 LLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVARIQYPDPKYFKSSSGSIEIDP 1184
Query: 1250 NSSLFEELPRWV 1261
++ ++ W+
Sbjct: 1185 DA---RQIKFWI 1193
Score = 49 (22.3 bits), Expect = 3.4e-13, Sum P(4) = 3.4e-13
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 1250 NSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNK 1304
N+ + + R++ + L +TT ++ +T S++L + + R+L+DS NK
Sbjct: 1091 NAYMSNKSKRFLTENYLSYTT---IKDITSTRSQYLSLLVELGFVNRKLDDSCNK 1142
Score = 49 (22.3 bits), Expect = 1.1e-12, Sum P(5) = 1.1e-12
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 1083 NSSLFEELPRWVLYHELVFTTKEFMRQVTEIESKWLLEVAPHYYKPRELEDSTNK 1137
N+ + + R++ + L +TT ++ +T S++L + + R+L+DS NK
Sbjct: 1091 NAYMSNKSKRFLTENYLSYTT---IKDITSTRSQYLSLLVELGFVNRKLDDSCNK 1142
Score = 43 (20.2 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 28/116 (24%), Positives = 50/116 (43%)
Query: 560 EHDKARELEKVQRY--YMPKGTKGPXXXXXXXXXXXXPHYEQRKWEDEQMSSAIFRVGAK 617
E+ K +EL ++ Y Y PK T +Y + + + IFR
Sbjct: 100 ENPKTKELIPIKFYPNYSPKETTNEARHMVATFVLHRINYIKNM---KMLLPIIFRDYWN 156
Query: 618 DREHQEQYELLLDN-QIDFIQALSLP-----GNRDKGEEEMTEKQKKKLNIEETKK 667
+ E E+ +LL +N ++ + + P R+ E++ E+Q K+ N +TKK
Sbjct: 157 ELE-DERLKLLKENKELHDKRYNTNPFTVYLQQRENEEKKAKERQIKEQNELKTKK 211
Score = 42 (19.8 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 447 DSDDDRKERDEFSERLKNRDK 467
+S RK DEF E L R K
Sbjct: 552 ESYKKRKHSDEFKEMLIQRSK 572
Score = 38 (18.4 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 1078 VMIHPNSSLFEE 1089
V IHP+S LF +
Sbjct: 1204 VFIHPSSVLFND 1215
Score = 38 (18.4 bits), Expect = 4.9e-30, Sum P(4) = 4.9e-30
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 1245 VMIHPNSSLFEE 1256
V IHP+S LF +
Sbjct: 1204 VFIHPSSVLFND 1215
Score = 38 (18.4 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 9/42 (21%), Positives = 22/42 (52%)
Query: 94 ADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQD 135
A+YI +V L + T +G +++ + + N+I+++
Sbjct: 469 ANYIKLAIVRELLKYLTDHIGQCMIYTIFEWLNDHVNKIIEN 510
Score = 37 (18.1 bits), Expect = 3.4e-13, Sum P(4) = 3.4e-13
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 322 KRKSSEYKVGNGEDSFC-VSPLYN 344
K K + K GNG+ F ++ YN
Sbjct: 1068 KLKQIQKKFGNGQGDFISMANAYN 1091
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 286 (105.7 bits), Expect = 6.4e-30, Sum P(2) = 6.4e-30
Identities = 95/350 (27%), Positives = 167/350 (47%)
Query: 757 TSERTIIKYMTDGTLHREFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGME 816
+ ++ ++K G R+ + ++A S+ + D V+VID G K+ +F++ +
Sbjct: 389 SDQKKVLKNPPAGV--RKIILSTNIAETSITVNDV----VFVIDSGKVKEKSFDALNFVT 442
Query: 817 SLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 876
L +V ISKASA Q CFRL++ +++ LE T PE+ R+ L L
Sbjct: 443 MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHT 501
Query: 877 KALG-INDLIHFDFL----DPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDP 931
K L +N I DFL +PPP + A++ L + A++ DLT+LG +A+ P++P
Sbjct: 502 KLLAPVNCPIA-DFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEP 560
Query: 932 MMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLG--GDHLV 989
+GKM+L + KC++ I+TIA L+ + A + F G DH+
Sbjct: 561 HLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMA 620
Query: 990 LLNIYNQW--ADAD-FSTQWCYENFIQHRSMKRARDVREQLIGLVQ-----RVE-----M 1036
LL + W A +D + +C +NF+ +M+ +R QL+G ++ R
Sbjct: 621 LLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIR 680
Query: 1037 ELVSNPTETVNIRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNSSL 1086
++ +N ++ A+ AG + ++ + + T + V HP S L
Sbjct: 681 DVNTNSENWAVVKAALVAGMYPNLVHVDRENVVLTGPKEKKVRFHPTSVL 730
Score = 198 (74.8 bits), Expect = 6.4e-25, Sum P(3) = 6.4e-25
Identities = 45/117 (38%), Positives = 71/117 (60%)
Query: 114 GDILVFLTGQEEIETCNE-ILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNA 172
G +L+FL G +EI + IL D R + + ++SN+ T Q K+ P
Sbjct: 343 GAVLIFLPGYDEIVGLRDRILFDDKRFADNTHSRYQVFMLHSNMQTSDQKKVLKNPPAGV 402
Query: 173 RKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
RK++L+TNIAETS+T++++++VID G K+ +F++ + L +V ISKASA QR G
Sbjct: 403 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKG 459
Score = 141 (54.7 bits), Expect = 6.4e-30, Sum P(2) = 6.4e-30
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 2 TDGTLHREFLS-EPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATL 60
T+G L R ++ + L++ + +I+DE HER +D L ++D+++ LKL++SSA L
Sbjct: 12 TNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAAL 71
Query: 61 DAQKFSEFFDDAPVFRIPGRRFPV 84
D F +F PV I GR F V
Sbjct: 72 DVNLFIRYFGSCPVIYIQGRPFEV 95
Score = 93 (37.8 bits), Expect = 6.4e-25, Sum P(3) = 6.4e-25
Identities = 33/144 (22%), Positives = 61/144 (42%)
Query: 1125 YYKPRELEDSTNKKMPKTLGKSRAELG--GDHLVLLNIYNQW--ADAD-FSTQWCYENFI 1179
Y P L ++K L + R G DH+ LL + W A +D + +C +NF+
Sbjct: 587 YRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFL 646
Query: 1180 QHRSMKRARDVREQLIGLVQ-----RVE-----MELVSNPTETVNIRKAITAGYFYHIAK 1229
+M+ +R QL+G ++ R ++ +N ++ A+ AG + ++
Sbjct: 647 SQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVH 706
Query: 1230 LSKSGSYKTAKHNQTVMIHPNSSL 1253
+ + T + V HP S L
Sbjct: 707 VDRENVVLTGPKEKKVRFHPTSVL 730
Score = 39 (18.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 155 NLPTDMQTKIFLPTPPNARKV 175
NL Q I+ TP N RK+
Sbjct: 1021 NLEISQQKGIWSTTPSNERKL 1041
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 366 (133.9 bits), Expect = 9.2e-30, P = 9.2e-30
Identities = 84/242 (34%), Positives = 131/242 (54%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDI-VRFRSDLKLLISSAT 59
+T+G L R S+P L +I DE HER++H+D+ L +D+ R DL++++ SAT
Sbjct: 100 VTEGILTRRLQSDPLLEGVGAVIFDEFHERSIHSDLALALCRDVQAGLREDLRIIVMSAT 159
Query: 60 LDAQKFSEFFDDAPVFRIPGRRFPVDIYYTKAPEADYIDACVVSILQIHATQPLGDILVF 119
+ A + DAPV GR +PV + + + + + + V ++I + GDIL F
Sbjct: 160 MAAAPVAALLGDAPVITSEGRNYPVALRHIPPNDRENLPSAVARAVRIAVRECEGDILAF 219
Query: 120 LTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
L G EI C ++L D + +++P+Y +LP Q + LP P RKVVLAT
Sbjct: 220 LPGVGEIRRCGQLLAD-----DPPLHAPLVVPLYGDLPFVEQERAILPVP-GRRKVVLAT 273
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAGVITGFNPLSD 239
IAETSLTI+ + V+D G ++ ++ +G+ L +S ASA QRAG P +
Sbjct: 274 TIAETSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTC 333
Query: 240 FR 241
+R
Sbjct: 334 YR 335
Score = 175 (66.7 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 49/146 (33%), Positives = 72/146 (49%)
Query: 798 VIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHELE 857
V+D G ++ ++ +G+ L +S ASA Q C+RL+ + L
Sbjct: 288 VVDGGQTRRLRYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTCYRLWPEHDQQALLA 347
Query: 858 DNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGDL 917
+ PEI +L L L G++D +LDPPP L A L +L AL+ G +
Sbjct: 348 ADP-PEILIADLAPLALDLAHWGVSDPASLAWLDPPPRGALEEARNLLKSLDALDGQGMI 406
Query: 918 TKLGRRMAEFPLDPMMGKMLL-ASEK 942
T+ GRRMAE PL P + MLL A+E+
Sbjct: 407 TETGRRMAELPLHPRLAHMLLRATER 432
Score = 170 (64.9 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 669 LPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKMKIGCTQPXXXXX 728
LP+ DL+ A+ +++ G+GKTT++P L +A + K +I +P
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGK-RIIMLEPRRLAA 62
Query: 729 XXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDLASYSVMI 788
+G + G VGYAIRF+ S RT ++ +T+G L R S+P L +I
Sbjct: 63 TNAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVI 122
Query: 789 IDEAHPK 795
DE H +
Sbjct: 123 FDEFHER 129
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 338 (124.0 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 68/149 (45%), Positives = 95/149 (63%)
Query: 654 EKQKKKLNIEE--TKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGF 711
E+++K +E T + PI ++ +I AVRD+ LI+ G TGSGKTTQ+P+YL+EAGF
Sbjct: 16 EEEEKGCTSQEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF 75
Query: 712 TKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMTDGTL 771
++ M IG TQP EEM LG +VGY +RF+DC+S+ T IKYMTDG L
Sbjct: 76 SQHGM-IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCL 134
Query: 772 HREFLSEPDLASYSVMIIDEAHPKVYVID 800
+ L +P+L +SV+I+DEAH + D
Sbjct: 135 LKHILGDPNLTKFSVIILDEAHERTLTTD 163
Score = 283 (104.7 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 65/138 (47%), Positives = 86/138 (62%)
Query: 1 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSD-----LKLLI 55
MTDG L + L +P+L +SV+I+DEAHERTL TDILFGL+K + + +S LK+++
Sbjct: 129 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVV 188
Query: 56 SSATLDAQKFSEFFDDAPVFRIPGRRFPVDIYYTK--APE----ADYIDACVVSILQIHA 109
SAT++ K S FF + P+F IPGR +PV + P YI A V + IH
Sbjct: 189 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 248
Query: 110 TQPLGDILVFLTGQEEIE 127
+ GDILVFLTGQ EIE
Sbjct: 249 NEMAGDILVFLTGQFEIE 266
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 240 (89.5 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 55/133 (41%), Positives = 81/133 (60%)
Query: 97 IDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNL 156
+D +LQI A G IL FL G +EI+ + L + LGS+ ++LPV+SN+
Sbjct: 695 LDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRL---LEMLGSQNSRYLVLPVHSNI 751
Query: 157 PTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTV 216
P Q IF PP RK+VLATNIAETS+TI++I++V+D G K+ ++ +T + L
Sbjct: 752 PMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLET 811
Query: 217 VPISKASANQRAG 229
V +SK++ QR G
Sbjct: 812 VWVSKSNVVQRRG 824
Score = 192 (72.6 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 38/87 (43%), Positives = 54/87 (62%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ P L S +++DE HER ++TD L L+K I + DL+L++ SAT D
Sbjct: 580 TVGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGD 639
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
Q+FS +F D PV ++PG +PV YY
Sbjct: 640 NQRFSHYFGDCPVVKVPGFMYPVKEYY 666
Score = 171 (65.3 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 669 LPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXX 725
LP+ P K ++ A+ + V++I G+TG GKTT+IPQ L E + + + TQP
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 726 XXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERT-IIKYMTDGTLHREFLSEPDLASY 784
+E+G + VGY +R E R + + T G L R+ P L
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 785 SVMIIDEAHPK 795
S +++DE H +
Sbjct: 598 SHVVVDEVHER 608
Score = 159 (61.0 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 56/231 (24%), Positives = 99/231 (42%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D H V+D G K+ ++ +T + L V +SK++ Q
Sbjct: 768 RKIVLATNIAETSITINDIVH----VVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRR 823
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKA-LGINDLIHF--DF 889
+ L+ + ++ VPEI R L N V+ K + + F
Sbjct: 824 GRAGRCQSGFAYHLFPR-SRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKA 882
Query: 890 LDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEI 949
LD P + + A+ L +G L+ LT LG+R+A+ DP + K ++ + Y+C+ +
Sbjct: 883 LDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPL 942
Query: 950 VTIASMLSVNGAIFYRPKDKIIHADTARKNFFM-LGGDHLVLLNIYNQWAD 999
+ I S L+ + F D A+ G DHL + W +
Sbjct: 943 LVIVSCLTRDP--FSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEE 991
Score = 40 (19.1 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 455 RDEFSERLKNRDKNNTKNVATSRQ 478
RD FS L+NR + + SR+
Sbjct: 951 RDPFSSSLQNRAEVDKAKAVLSRE 974
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 226 (84.6 bits), Expect = 7.7e-29, Sum P(3) = 7.7e-29
Identities = 88/342 (25%), Positives = 147/342 (42%)
Query: 796 VYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXXXXXXXXXXXKCFRLYTAWAYKHE 855
+YVID G K ++S LT+ IS+A A Q C+RLY
Sbjct: 534 LYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMAR- 592
Query: 856 LEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFL----DPPPHETLVLALEQLYALGAL 911
+ T+PEI R L L+ K + I +FL D PP + ++ + +L LG L
Sbjct: 593 MNLYTIPEIMRRTLDEICLLTKLAAPDKKIE-NFLALALDTPPKDAVMQSCSRLKLLGVL 651
Query: 912 NHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEIVTIASMLSVNGAIFYR-PKDKI 970
+ ++T LG +AE PL +GK L+ S +C++ ++ IA+ SV + K
Sbjct: 652 DERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKK 711
Query: 971 IHADTARKNFFMLG-GDHLVLLNIYNQWADADFST--QWCYENFIQHRSMKRARDVREQL 1027
+R F G D L ++ +Y ++ + +C NFI +M+ L
Sbjct: 712 SGQQISRVLFAGDGMSDSLAVIKLYEEFTNLKRKDIGDFCERNFICRNAMEMFVSAASTL 771
Query: 1028 IGLVQRV------EMELVSNPTETVN-IRKAITAGYFYHIAKLSKSGSYK-TAKHNQTVM 1079
V R+ L S+ N IR A+TAG + +A + + + A+ + V
Sbjct: 772 RDTVYRIFRFSEASARLASSFNNDTNMIRLALTAGLYPKLAYMDRENKNQLVAEGDPLVQ 831
Query: 1080 IHPNSSLFEELPRWVLYHE-LVFTTK-EFMRQVTEIESKWLL 1119
+ +S L + + L E ++F K Q++ +E L+
Sbjct: 832 VSRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTLV 873
Score = 203 (76.5 bits), Expect = 7.7e-29, Sum P(3) = 7.7e-29
Identities = 53/162 (32%), Positives = 83/162 (51%)
Query: 639 LSLPGNRDK-GEEEMTEKQKKK-LNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGS 696
+ LP N G+ + Q + NI+ ++SLPIY ++ +++ ++ QVLII+G TGS
Sbjct: 177 IRLPSNFGLVGQRLIPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGS 236
Query: 697 GKTTQIPQYLHE-AGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFED 755
GK+TQ+PQY+ E A + ++I +QP +E G G VGY IR
Sbjct: 237 GKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNR 296
Query: 756 CTSERTIIKYMTDGTLHREFLSEPD--LASYSVMIIDEAHPK 795
S T++ T G L R + + + +IIDEAH +
Sbjct: 297 QCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHER 338
Score = 181 (68.8 bits), Expect = 7.4e-28, Sum P(2) = 7.4e-28
Identities = 44/139 (31%), Positives = 78/139 (56%)
Query: 92 PEADYIDACVVSILQIHATQ-PLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIIL 150
P+ D + +VS+L++ Q G ++V+L G ++ + L+ + R +++ I+
Sbjct: 440 PDID--NDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESSLPR-----EQITII 492
Query: 151 PVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTG 210
++S + Q K+F P K++L+TNI +TS+TI +++YVID G K ++S
Sbjct: 493 LLHSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTID 552
Query: 211 MESLTVVPISKASANQRAG 229
LT+ IS+A A QRAG
Sbjct: 553 ASQLTLTWISQADAKQRAG 571
Score = 134 (52.2 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 50/204 (24%), Positives = 92/204 (45%)
Query: 22 MIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLDAQKFSEFFDDAPVFRIPGRR 81
+IIDEAHER L TD L K ++ L+L++ SAT+D + S +F V + GR
Sbjct: 330 LIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRS 389
Query: 82 FPVDIYYTK--APEADYIDACVVSIL-QIHATQPLGDILVFLTGQEEI---ETCNEI--- 132
F V IY+ + + Y+ + L + + ++L G I + N++
Sbjct: 390 FEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVS 449
Query: 133 LQDRVRRLGSKIKELIILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNII 192
L + + R G ++ LP YS++ T + ++ P ++L + + S +
Sbjct: 450 LLELLLRQGDAGAVIVYLPGYSDM-TSLLARLESSLPREQITIILLHSQVDNSE--QRKV 506
Query: 193 YVIDPGFCKQNNFNSRTGMESLTV 216
+ PG + ++ G S+T+
Sbjct: 507 FRTYPGVRLKIILSTNIGQTSITI 530
Score = 58 (25.5 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 30/136 (22%), Positives = 56/136 (41%)
Query: 1153 DHLVLLNIYNQWADADFST--QWCYENFIQHRSMKRARDVREQLIGLVQRV------EME 1204
D L ++ +Y ++ + +C NFI +M+ L V R+
Sbjct: 728 DSLAVIKLYEEFTNLKRKDIGDFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASAR 787
Query: 1205 LVSNPTETVN-IRKAITAGYFYHIAKLSKSGSYK-TAKHNQTVMIHPNSSLF-----EEL 1257
L S+ N IR A+TAG + +A + + + A+ + V + +S L ++L
Sbjct: 788 LASSFNNDTNMIRLALTAGLYPKLAYMDRENKNQLVAEGDPLVQVSRSSCLRGKKKQKDL 847
Query: 1258 P-RWVLYHELVFTTKE 1272
W+L+ E T +
Sbjct: 848 ASEWILFVEKTRTADQ 863
Score = 37 (18.1 bits), Expect = 7.7e-29, Sum P(3) = 7.7e-29
Identities = 9/47 (19%), Positives = 20/47 (42%)
Query: 86 IYYTKAPEADYIDACVVSILQIHATQPLGDILVFLTGQEEIETCNEI 132
+ + P++D ++ ++ PL D+L + G E N +
Sbjct: 118 VLFISRPQSDGQQQYILCNTKLDICPPLLDVLGQMAGNVERRLMNSV 164
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 227 (85.0 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 70/230 (30%), Positives = 116/230 (50%)
Query: 16 LASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLDAQKFSEFFDDAPVF 75
L++ S +++DE HER++ DIL L+K ++ +LK+++ SAT+++ F +F +A
Sbjct: 694 LSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAGHL 753
Query: 76 RIPGRRFPVDIYYTK--APEA----DYIDACVVSILQIHATQPLGDILVFLTGQEEIETC 129
I GR FP+ YY + AP+ D D + L LV E +
Sbjct: 754 HIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVSSIDAELGSSS 813
Query: 130 NEILQ-----DRVRRLGSKIK-----ELIILPVYSNLPTDMQTKIFLPTPPNARKVVLAT 179
IL + R +IK + +LP++++L T Q + F RK++ AT
Sbjct: 814 GSILVFLPGVSNIARCIREIKSKDGSKFEVLPLHASLNTSEQRRCFKTY--TKRKIICAT 871
Query: 180 NIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQRAG 229
NIAETS+TID+++ VID G KQ +++ + + S+A+ QR G
Sbjct: 872 NIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRG 921
Score = 199 (75.1 bits), Expect = 9.8e-29, Sum P(4) = 9.8e-29
Identities = 45/150 (30%), Positives = 79/150 (52%)
Query: 651 EMTEKQKKKLNIEETKKSLPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHE-- 708
E + +L + E +K LP + ++ ++DA++ QV++I GETGSGK+TQ+ Q++ +
Sbjct: 560 ERVKSPSYQLKVREREK-LPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHY 618
Query: 709 -AGFTKDKMKIGCTQPXXXXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTIIKYMT 767
+ KD + CTQP E +G EVGY++ E S+ T++++ T
Sbjct: 619 LSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCT 678
Query: 768 DGTLHREFLSEP--DLASYSVMIIDEAHPK 795
G L R L++ S +++DE H +
Sbjct: 679 TGLLLRRIQQHGLGFLSTLSCVVVDEVHER 708
Score = 194 (73.4 bits), Expect = 9.8e-29, Sum P(4) = 9.8e-29
Identities = 70/283 (24%), Positives = 124/283 (43%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D V VID G KQ +++ + + S+A+ Q
Sbjct: 865 RKIICATNIAETSITIDDV----VAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRR 920
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLG----NAVLMLKALG-----IND 883
C++LYT + + T PE+ R L N V ++K +N
Sbjct: 921 GRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQ 980
Query: 884 --LIHF--DFLDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLA 939
+ F +DPP T+ LAL++L +GAL DLT LG + P+D +GK+L+
Sbjct: 981 GSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVF 1040
Query: 940 SEKYKCVEEIVTIASMLSVNGAIFYRPKDKIIHADTARKNFFMLGGDHLVLLNIYNQWAD 999
+ +E +TI ++LS + + I + ++ GD L +Y+ W +
Sbjct: 1041 GSIFGYLEPALTITAILSTKSPFLGDDEAREIRSKQSQG-----WGDVLADARVYHNWLE 1095
Query: 1000 ------ADFSTQWCYENFIQHRSMKRARDVREQLIGLVQRVEM 1036
+ QWC E + + ++++ R R +L Q +E+
Sbjct: 1096 ILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLEL 1138
Score = 79 (32.9 bits), Expect = 9.8e-29, Sum P(4) = 9.8e-29
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 1073 KHNQTVMIHPNSSLFEELPR-----WVLYHELVFTTKEFMRQVTEIES 1115
++NQ + IHP+S++F P +V Y + V TTK F+R T I +
Sbjct: 1202 QNNQRLFIHPSSTMFVNSPNASRCTFVAYEQKVETTKPFLRNCTPINT 1249
Score = 79 (32.9 bits), Expect = 9.8e-29, Sum P(4) = 9.8e-29
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 1240 KHNQTVMIHPNSSLFEELPR-----WVLYHELVFTTKEFMRQVTEIES 1282
++NQ + IHP+S++F P +V Y + V TTK F+R T I +
Sbjct: 1202 QNNQRLFIHPSSTMFVNSPNASRCTFVAYEQKVETTKPFLRNCTPINT 1249
Score = 62 (26.9 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 1145 KSRAELG-GDHLVLLNIYNQWAD------ADFSTQWCYENFIQHRSMKRARDVREQLIGL 1197
+S+ G GD L +Y+ W + + QWC E + + ++++ R R +L
Sbjct: 1073 RSKQSQGWGDVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEA 1132
Query: 1198 VQRVEM 1203
Q +E+
Sbjct: 1133 AQLLEL 1138
Score = 47 (21.6 bits), Expect = 9.8e-29, Sum P(4) = 9.8e-29
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 64 KFSEFFDDAPVFRIPGRRFPVDIYYTKAPE----ADYIDACVVSILQIHATQPLGD-ILV 118
+F E F D FR P R +P I A YI ++ + ++A G+ +L
Sbjct: 435 EFGELFVD---FRRPARSYPAHIPLMSLSSTKRMASYIKLSILKKMVVYAMDLRGECMLS 491
Query: 119 FLTG--QEEIE 127
+L QE IE
Sbjct: 492 WLYNHLQENIE 502
Score = 41 (19.5 bits), Expect = 1.0e-12, Sum P(4) = 1.0e-12
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 644 NRDKGEEEMTEKQKKKLNIE 663
N D EE++ ++KK+ I+
Sbjct: 775 NEDDDEEDVPRRKKKEYEID 794
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 240 (89.5 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 55/133 (41%), Positives = 81/133 (60%)
Query: 97 IDACVVSILQIHATQPLGDILVFLTGQEEIETCNEILQDRVRRLGSKIKELIILPVYSNL 156
+D +LQI A G IL FL G +EI+ + L + LGS+ ++LPV+SN+
Sbjct: 695 LDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRL---LEMLGSQNSRYLVLPVHSNI 751
Query: 157 PTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNSRTGMESLTV 216
P Q IF PP RK+VLATNIAETS+TI++I++V+D G K+ ++ +T + L
Sbjct: 752 PMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLET 811
Query: 217 VPISKASANQRAG 229
V +SK++ QR G
Sbjct: 812 VWVSKSNVVQRRG 824
Score = 185 (70.2 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 37/87 (42%), Positives = 53/87 (60%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L R+ P L S +++DE HER ++TD L L+K I + DL+L++ SAT D
Sbjct: 580 TVGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGD 639
Query: 62 AQKFSEFFDDAPVFRIPGRRFPVDIYY 88
Q+FS +F PV ++PG +PV YY
Sbjct: 640 NQRFSHYFGGCPVVKVPGFMYPVKEYY 666
Score = 171 (65.3 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 669 LPIYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDK---MKIGCTQPXX 725
LP+ P K ++ A+ + V++I G+TG GKTT+IPQ L E + + + TQP
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 726 XXXXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERT-IIKYMTDGTLHREFLSEPDLASY 784
+E+G + VGY +R E R + + T G L R+ P L
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 785 SVMIIDEAHPK 795
S +++DE H +
Sbjct: 598 SHVVVDEVHER 608
Score = 159 (61.0 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 56/231 (24%), Positives = 99/231 (42%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D H V+D G K+ ++ +T + L V +SK++ Q
Sbjct: 768 RKIVLATNIAETSITINDIVH----VVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRR 823
Query: 833 XXXXXXXXXKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKA-LGINDLIHF--DF 889
+ L+ + ++ VPEI R L N V+ K + + F
Sbjct: 824 GRAGRCQSGFAYHLFPR-SRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKA 882
Query: 890 LDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEI 949
LD P + + A+ L +G L+ LT LG+R+A+ DP + K ++ + Y+C+ +
Sbjct: 883 LDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPL 942
Query: 950 VTIASMLSVNGAIFYRPKDKIIHADTARKNFFM-LGGDHLVLLNIYNQWAD 999
+ I S L+ + F D A+ G DHL + W +
Sbjct: 943 LVIVSCLTRDP--FSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEE 991
Score = 40 (19.1 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 455 RDEFSERLKNRDKNNTKNVATSRQ 478
RD FS L+NR + + SR+
Sbjct: 951 RDPFSSSLQNRAEVDKAKAVLSRE 974
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 197 (74.4 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 48/142 (33%), Positives = 80/142 (56%)
Query: 93 EADYIDACVVSILQIHATQPLGD-----ILVFLTGQEEIETCNEILQDRVRRLGSKIKEL 147
++D +D ++ L +H + IL+FL G E+I E+++ R L ++ E
Sbjct: 924 QSDDVDHEMILQLIVHIVTKVSSTSEDSILIFLPGWEDISQTRELMR-RHPMLRNE-NEF 981
Query: 148 IILPVYSNLPTDMQTKIFLPTPPNARKVVLATNIAETSLTIDNIIYVIDPGFCKQNNFNS 207
+ILP++S++ +Q K+F PP RK+VL+TNIAETS+TI++++YVID K +
Sbjct: 982 LILPLHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHET 1041
Query: 208 RTGMESLTVVPISKASANQRAG 229
+ + V K+S QR G
Sbjct: 1042 QRDLTLFQTVWACKSSLKQRRG 1063
Score = 191 (72.3 bits), Expect = 2.8e-28, Sum P(4) = 2.8e-28
Identities = 54/185 (29%), Positives = 95/185 (51%)
Query: 773 REFLSEPDLASYSVMIIDEAHPKVYVIDPGFCKQNNFNSRTGMESLTVVPISKASANQXX 832
R+ + ++A S+ I D VYVID K ++ + V K+S Q
Sbjct: 1007 RKIVLSTNIAETSITINDV----VYVIDSAKVKLKYHETQRDLTLFQTVWACKSSLKQRR 1062
Query: 833 XXXXXXXXXK-CFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DF 889
C+ + + Y + LE+ + E++R+ L L +K L + D+I F +
Sbjct: 1063 GRAGRVRKDGVCYHMVSRDRY-NTLEEFQLSEMRRMPLHELCLQVKVLVLGDVIGFLSEA 1121
Query: 890 LDPPPHETLVLALEQLYALGALNHHGDLTKLGRRMAEFPLDPMMGKMLLASEKYKCVEEI 949
L+PP +++ A+ L LGALN + +LT LG +++ P+DP +GKM++ ++C++ I
Sbjct: 1122 LEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPI 1181
Query: 950 VTIAS 954
+TIAS
Sbjct: 1182 LTIAS 1186
Score = 177 (67.4 bits), Expect = 2.8e-28, Sum P(4) = 2.8e-28
Identities = 55/189 (29%), Positives = 88/189 (46%)
Query: 611 IFRVGAKDREHQEQYELLLDNQIDFIQALSLPGNRDKGEEEMTEKQKKKLNIEETKKSLP 670
I ++ K + Q + LLD + + LS G + E + + I + + LP
Sbjct: 662 ILQLNKKINTYTPQ-QTLLD--VKSFEELSDIGIERRAYEHNKRQTAEYKRIYQKRTELP 718
Query: 671 IYPFKQDLIDAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTKDKM---KIGCTQPXXXX 727
I+ + LI++++++Q++II G+TG GKTTQIPQ++ E I TQP
Sbjct: 719 IFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNIVMTQPRRIS 778
Query: 728 XXXXXXXXXEEMGVKLGCEVGYAIRFEDCTSERTI-IKYMTDGTLHREFLSEPDLASYSV 786
E K+G VGY IRF++ T + T G L + S+ L + S
Sbjct: 779 VLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYSDMKLHNVSH 838
Query: 787 MIIDEAHPK 795
+ IDE H +
Sbjct: 839 LFIDEVHER 847
Score = 131 (51.2 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 2 TDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIVRFRSDLKLLISSATLD 61
T G L + S+ L + S + IDE HER +HTD L ++K ++ ++L++++ SAT+D
Sbjct: 819 TPGILLKRMYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMD 878
Query: 62 AQKFSEFFDDAPVFRI 77
S +F PV ++
Sbjct: 879 NSLVSAYFGTCPVIKL 894
Score = 110 (43.8 bits), Expect = 2.8e-28, Sum P(4) = 2.8e-28
Identities = 42/139 (30%), Positives = 67/139 (48%)
Query: 1138 KMPKTLGKSRAELGGDHLVLLNIYNQWADADFS---TQWCYENFIQHRSMKRARDVREQL 1194
+ PK L EL DHL LNI+N W + Q+C ++F+ +++ V++QL
Sbjct: 1226 QQPKNL---YPELQSDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLLQQILKVKKQL 1281
Query: 1195 IGLVQR---VEMEL----VSNP--TETVN----IRKAITAGYFYHIAKLSKSGSYKTAKH 1241
+ + + +L V+N E N IR I +G F +IA+ K +KT
Sbjct: 1282 LSTINDLGIINAQLRDGFVNNSFFNENSNNLDIIRAIICSGLFPNIARQRKKREFKTLSE 1341
Query: 1242 NQTVMIHPNS---SLFEEL 1257
N +HP+S +LF+EL
Sbjct: 1342 N--TFLHPSSIVYNLFQEL 1358
Score = 107 (42.7 bits), Expect = 5.7e-28, Sum P(4) = 5.7e-28
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 978 KNFFM-LGGDHLVLLNIYNQWADADFS---TQWCYENFIQHRSMKRARDVREQLIGLVQR 1033
KN + L DHL LNI+N W + Q+C ++F+ +++ V++QL+ +
Sbjct: 1229 KNLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLLQQILKVKKQLLSTIND 1287
Query: 1034 ---VEMEL----VSNP--TETVN----IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMI 1080
+ +L V+N E N IR I +G F +IA+ K +KT N +
Sbjct: 1288 LGIINAQLRDGFVNNSFFNENSNNLDIIRAIICSGLFPNIARQRKKREFKTLSEN--TFL 1345
Query: 1081 HPNS---SLFEEL 1090
HP+S +LF+EL
Sbjct: 1346 HPSSIVYNLFQEL 1358
Score = 103 (41.3 bits), Expect = 1.5e-27, Sum P(4) = 1.5e-27
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 1048 IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNS---SLFEEL-PR--WVLYHELVF 1101
IR I +G F +IA+ K +KT N +HP+S +LF+EL P+ WV++ E
Sbjct: 1315 IRAIICSGLFPNIARQRKKREFKTLSEN--TFLHPSSIVYNLFQELNPKENWVIFEEKFK 1372
Query: 1102 TTKEFMRQVTEI-ESKWLLEVAPHYYKPRELEDST 1135
T F++ +T I E LL + + E+ST
Sbjct: 1373 TKLTFIKTITRIPEISLLLFGSTPIFNQTSTENST 1407
Score = 103 (41.3 bits), Expect = 1.5e-27, Sum P(4) = 1.5e-27
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 1215 IRKAITAGYFYHIAKLSKSGSYKTAKHNQTVMIHPNS---SLFEEL-PR--WVLYHELVF 1268
IR I +G F +IA+ K +KT N +HP+S +LF+EL P+ WV++ E
Sbjct: 1315 IRAIICSGLFPNIARQRKKREFKTLSEN--TFLHPSSIVYNLFQELNPKENWVIFEEKFK 1372
Query: 1269 TTKEFMRQVTEI-ESKWLLEVAPHYYKPRELEDST 1302
T F++ +T I E LL + + E+ST
Sbjct: 1373 TKLTFIKTITRIPEISLLLFGSTPIFNQTSTENST 1407
Score = 43 (20.2 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 859 NTVPEIQR-----INLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNH 913
N PE+Q +N+ N L + G D DFL P + ++ +QL L +N
Sbjct: 1230 NLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYCQDFLSIPLLQQILKVKKQL--LSTIND 1287
Query: 914 HG 915
G
Sbjct: 1288 LG 1289
Score = 39 (18.8 bits), Expect = 2.8e-28, Sum P(4) = 2.8e-28
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 255 CAHVLGEEVLRPEVSQP 271
C ++L E+++PE P
Sbjct: 603 CEYLLENELIQPEYKAP 619
WARNING: HSPs involving 65 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1320 1219 0.00099 123 3 11 22 0.39 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 315
No. of states in DFA: 627 (67 KB)
Total size of DFA: 553 KB (2249 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 105.95u 0.09s 106.04t Elapsed: 00:01:07
Total cpu time: 106.13u 0.10s 106.23t Elapsed: 00:01:11
Start: Thu Aug 15 14:39:40 2013 End: Thu Aug 15 14:40:51 2013
WARNINGS ISSUED: 2