BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1909
(92 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q16QL3|COQ2_AEDAE 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Aedes
aegypti GN=coq2 PE=3 SV=1
Length = 441
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+ +D LG+KSTAI FGD TKL+LSGF M+ LV G++ QTWPY+ ++ +I +H
Sbjct: 299 QDKVDDALLGIKSTAIRFGDNTKLWLSGFSTAMIGGLVASGMVCEQTWPYYSAVGVISAH 358
Query: 74 LASQIYHLDI 83
LA QIY L+I
Sbjct: 359 LAHQIYSLNI 368
>sp|Q2KIQ4|COQ2_BOVIN 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Bos
taurus GN=COQ2 PE=2 SV=1
Length = 371
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+K+D +GLKSTA+LF + TK +LSGF M+ +L G+ SGQT PY+ +L+ +G+H
Sbjct: 254 QDKKDDALIGLKSTALLFREDTKKWLSGFSVAMLGALSLVGVNSGQTMPYYTALAAVGAH 313
Query: 74 LASQIYHLDI 83
LA QIY LDI
Sbjct: 314 LAHQIYTLDI 323
>sp|Q96H96|COQ2_HUMAN 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Homo
sapiens GN=COQ2 PE=1 SV=1
Length = 371
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+++D+ +GLKSTA+ FG+ TK +LSGF M+ +L G+ SGQT PY+ +L +G+H
Sbjct: 254 QDKRDDVLIGLKSTALRFGENTKPWLSGFSVAMLGALSLVGVNSGQTAPYYAALGAVGAH 313
Query: 74 LASQIYHLDI 83
L QIY LDI
Sbjct: 314 LTHQIYTLDI 323
>sp|Q298G6|COQ2_DROPS 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=coq2 PE=3
SV=1
Length = 397
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+ +D+ +G+KSTA+ FG+ TK++LSGF M++ L T G QT PY+ ++ ++G+H
Sbjct: 266 QDKLDDLQIGVKSTALRFGENTKVWLSGFTAAMLTGLSTAGWACDQTLPYYAAVGVVGAH 325
Query: 74 LASQIYHLDI 83
L QIY L+I
Sbjct: 326 LVQQIYSLNI 335
>sp|Q9VHS7|COQ2_DROME 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Drosophila melanogaster GN=Coq2 PE=2 SV=1
Length = 392
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 49/70 (70%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+ +D+ +G+KSTA+ FG+ TK++LSGF M++ L G QT PY+ ++ ++G+H
Sbjct: 260 QDKLDDLQIGVKSTALRFGENTKVWLSGFTAAMLTGLSAAGWACDQTVPYYAAVGVVGAH 319
Query: 74 LASQIYHLDI 83
L QIY L+I
Sbjct: 320 LVQQIYSLNI 329
>sp|Q8I7J4|COQ2_CAEEL 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Caenorhabditis elegans GN=coq-2 PE=2 SV=2
Length = 356
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+ +DI +G+KSTA+ G TK +LS FG ++SL CGI S QTWPY+++L+ +
Sbjct: 245 QDKADDIMIGVKSTALRLGADTKKWLSAFGVGTVASLTACGIASDQTWPYYVALAATTAQ 304
Query: 74 LASQIYHLDI 83
L Q+ +DI
Sbjct: 305 LGWQVGTVDI 314
>sp|Q499N4|COQ2_RAT 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Rattus
norvegicus GN=Coq2 PE=2 SV=1
Length = 374
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+K+D +GLKSTA+LF + TK +LSGFG M+ +L G SGQT PY+ +++ +G+H
Sbjct: 254 QDKKDDALIGLKSTALLFRENTKQWLSGFGVAMVGALSLVGASSGQTLPYYAAVAAVGAH 313
Query: 74 LASQIYHLDI 83
LA QIY +DI
Sbjct: 314 LAHQIYTVDI 323
>sp|Q66JT7|COQ2_MOUSE 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Mus
musculus GN=Coq2 PE=2 SV=2
Length = 374
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 53/70 (75%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+K+D +GLKSTA+LF + T+ +LSGFG M+++L G +GQT PY+ +++ +G+H
Sbjct: 254 QDKKDDALIGLKSTALLFQENTRQWLSGFGVAMVAALSLAGANNGQTVPYYAAVAAVGAH 313
Query: 74 LASQIYHLDI 83
LA QIY +DI
Sbjct: 314 LAHQIYTVDI 323
>sp|Q93YP7|4HPT_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Arabidopsis thaliana GN=PPT1 PE=2 SV=1
Length = 407
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+++D+ +G+KSTA+ FGD TKL+L+GFG + L G + W Y+ SL+
Sbjct: 307 QDKEDDVKVGVKSTALRFGDNTKLWLTGFGTASIGFLALSGFSADLGWQYYASLAAASGQ 366
Query: 74 LASQIYHLDI 83
L QI D+
Sbjct: 367 LGWQIGTADL 376
>sp|Q10252|COQ2_SCHPO 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=coq2 PE=1 SV=2
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGS- 72
+D+++D+ + STA+ FGD TK L G + +++L T GI++GQ P F +L + G+
Sbjct: 253 QDKRDDVKANIYSTALRFGDNTKPVLCGLAALQIATLATAGIMNGQG-PVFYTLGVAGAA 311
Query: 73 -HLASQIYHLDI 83
L+S IY +D+
Sbjct: 312 YRLSSMIYKVDL 323
>sp|Q8W405|PGT1_LITER 4-hydroxybenzoate geranyltransferase 1 OS=Lithospermum
erythrorhizon GN=PGT-1 PE=1 SV=1
Length = 307
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+ +D G+KSTA+ FGD TK+++S FG +++LV G++ PY++ +++
Sbjct: 207 QDKVDDAKAGIKSTALRFGDATKMWISWFGVGCIAALVIGGLILNIGLPYYVFVAIATGQ 266
Query: 74 LASQIYHLDIV 84
L QI+ +D++
Sbjct: 267 LVWQIFTVDLL 277
>sp|Q54U71|COQ2_DICDI 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Dictyostelium discoideum GN=coq2 PE=3 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 14 RDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSH 73
+D+++DI +G+KSTA+ F +K+++ LS F G+++S + GI + Y+L + SH
Sbjct: 352 QDKRDDILVGVKSTALKFAEKSRIILSVFSGLVISGMFLTGIAANMPLFYYLGTAACSSH 411
Query: 74 LASQIYHLD 82
L Q+ +D
Sbjct: 412 LIWQLKTVD 420
>sp|Q0VTA7|UBIA_ALCBS 4-hydroxybenzoate octaprenyltransferase OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=ubiA PE=3 SV=1
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 15 DRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSHL 74
DR++D+ LG+KSTAILFGD +L ++ + + +L+ G G +WP++ L+G L
Sbjct: 193 DREDDLKLGIKSTAILFGDADRLMIAILQALTLLALIMVGHRLGFSWPWY--AGLVGMSL 250
Query: 75 ASQIYH 80
+ H
Sbjct: 251 SFAFQH 256
>sp|A1WVM9|UBIA_HALHL 4-hydroxybenzoate octaprenyltransferase OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=ubiA PE=3 SV=2
Length = 280
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 15 DRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSLSLIGSHL 74
DR +DI +G+KSTA+LFGD +L ++ G+M+ ++V G+ + Y+L L+
Sbjct: 182 DRDDDIKIGVKSTAVLFGDLDRLMIAILQGLMLLAMVQVGLHVEASTAYYLGLAGAAGLF 241
Query: 75 ASQIY 79
A Q Y
Sbjct: 242 AYQQY 246
>sp|Q8W404|PGT2_LITER 4-hydroxybenzoate geranyltransferase 2 OS=Lithospermum
erythrorhizon GN=PGT-2 PE=1 SV=1
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 6 VLDKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFL 65
V D +D+ +D G+KSTA+ FGD TK++++ FG + +L+ G + PY++
Sbjct: 198 VYDTIYAHQDKVDDAKAGIKSTALRFGDATKIWITWFGIGCIGALLLGGFIVNIGLPYYV 257
Query: 66 SLSLIGSHLASQIYHLDI 83
L++ L QI+ +D+
Sbjct: 258 FLAIATGQLIWQIFTVDL 275
>sp|A4W5F3|UBIA_ENT38 4-hydroxybenzoate octaprenyltransferase OS=Enterobacter sp. (strain
638) GN=ubiA PE=3 SV=1
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ +V G L+G W ++ S+
Sbjct: 184 DTQYAMVDRDDDLKIGIKSTAILFGRHDKLIIGILQVAVLALMVVIGRLNGLNWEFYWSV 243
Query: 68 SLIGSHLASQ 77
+ G A Q
Sbjct: 244 LVAGLLFAYQ 253
>sp|Q1R3P6|UBIA_ECOUT 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain
UTI89 / UPEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + F +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIFQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|A1AIL7|UBIA_ECOK1 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O1:K1 /
APEC GN=ubiA PE=3 SV=1
Length = 290
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + F +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIFQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B7MJ30|UBIA_ECO45 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + F +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIFQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|Q31DM4|UBIA_THICR 4-hydroxybenzoate octaprenyltransferase OS=Thiomicrospira crunogena
(strain XCL-2) GN=ubiA PE=3 SV=1
Length = 285
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 6 VLDKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFL 65
V D D+++D+ LG+KSTAILFGD+ + + F +M+ + G L G +W Y+
Sbjct: 179 VYDTAYAVADKEDDVKLGIKSTAILFGDRVQEIIGFFQAIMLLGFLWIGDLFGLSWLYYG 238
Query: 66 SLSLIGSHLASQIYHL 81
S+ + Y L
Sbjct: 239 SVLIAAGFFVYHQYLL 254
>sp|A6W3L5|UBIA_MARMS 4-hydroxybenzoate octaprenyltransferase OS=Marinomonas sp. (strain
MWYL1) GN=ubiA PE=3 SV=1
Length = 284
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 15 DRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
DR +D+ +G+KSTAILFG + G+ +S L G+L+G W YF+SL
Sbjct: 186 DRPDDLKIGIKSTAILFGQYDLFVIICLQGLTLSLLTWIGLLAGLHWLYFVSL 238
>sp|B5XXZ2|UBIA_KLEP3 4-hydroxybenzoate octaprenyltransferase OS=Klebsiella pneumoniae
(strain 342) GN=ubiA PE=3 SV=1
Length = 288
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG+ +L + +++ + G L+G W Y+ SL
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGENDRLIIGILQVAVLALMGAVGWLNGLGWEYYWSL 243
>sp|A6TGU9|UBIA_KLEP7 4-hydroxybenzoate octaprenyltransferase OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=ubiA PE=3 SV=1
Length = 288
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG+ +L + +++ + G L+G W Y+ SL
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGENDRLIIGILQVAVLALMGAVGWLNGLGWEYYWSL 243
>sp|C6DKC9|UBIA_PECCP 4-hydroxybenzoate octaprenyltransferase OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=ubiA PE=3
SV=1
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG L + M++ L+ G ++G PY++SL
Sbjct: 184 DTQYAMVDRDDDLKIGVKSTAILFGRFDNLIIGLLQFSMLALLLILGTMTGLGMPYYISL 243
Query: 68 SLIGSHLASQ 77
+ G Q
Sbjct: 244 LVAGGMFIYQ 253
>sp|Q83IP7|UBIA_SHIFL 4-hydroxybenzoate octaprenyltransferase OS=Shigella flexneri
GN=ubiA PE=3 SV=1
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 VVAGALFVYQ 253
>sp|A8AN88|UBIA_CITK8 4-hydroxybenzoate octaprenyltransferase OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ubiA
PE=3 SV=1
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDLKIGIKSTAILFGRHDKLIIGILQIAVLALMALIGWLNGLGWGYYWSV 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|Q0SXQ7|UBIA_SHIF8 4-hydroxybenzoate octaprenyltransferase OS=Shigella flexneri
serotype 5b (strain 8401) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 VVAGALFVYQ 253
>sp|B6I5Q5|UBIA_ECOSE 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain
SE11) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 VVAGALFVYQ 253
>sp|A8A7E0|UBIA_ECOHS 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O9:H4
(strain HS) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 VVAGALFVYQ 253
>sp|B7M7V3|UBIA_ECO8A 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O8
(strain IAI1) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 VVAGALFVYQ 253
>sp|B7LAY8|UBIA_ECO55 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain
55989 / EAEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 VVAGALFVYQ 253
>sp|Q3YUU4|UBIA_SHISS 4-hydroxybenzoate octaprenyltransferase OS=Shigella sonnei (strain
Ss046) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|Q327U7|UBIA_SHIDS 4-hydroxybenzoate octaprenyltransferase OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|Q31TU8|UBIA_SHIBS 4-hydroxybenzoate octaprenyltransferase OS=Shigella boydii serotype
4 (strain Sb227) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B2TX76|UBIA_SHIB3 4-hydroxybenzoate octaprenyltransferase OS=Shigella boydii serotype
18 (strain CDC 3083-94 / BS512) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B1LPK5|UBIA_ECOSM 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B7NFY4|UBIA_ECOLU 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|P0AGK1|UBIA_ECOLI 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain
K12) GN=ubiA PE=1 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B1IUL2|UBIA_ECOLC 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|P0AGK2|UBIA_ECOL6 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|Q0TA22|UBIA_ECOL5 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B1XC39|UBIA_ECODH 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain
K12 / DH10B) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|C5A133|UBIA_ECOBW 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain
K12 / MC4100 / BW2952) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B7MRH2|UBIA_ECO81 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O81
(strain ED1a) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B7NS04|UBIA_ECO7I 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B5Z181|UBIA_ECO5E 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|P0AGK3|UBIA_ECO57 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O157:H7
GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|B7UPK1|UBIA_ECO27 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|A7ZUR2|UBIA_ECO24 4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=ubiA PE=3 SV=1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 8 DKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSGQTWPYFLSL 67
D Q DR +D+ +G+KSTAILFG KL + +++ + G L+G W Y+ S+
Sbjct: 184 DTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSI 243
Query: 68 SLIGSHLASQ 77
+ G+ Q
Sbjct: 244 LVAGALFVYQ 253
>sp|Q0A5V9|UBIA_ALHEH 4-hydroxybenzoate octaprenyltransferase OS=Alkalilimnicola
ehrlichei (strain MLHE-1) GN=ubiA PE=3 SV=1
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 6 VLDKQSRPRDRKEDISLGLKSTAILFGDKTKLYLSGFGGVMMSSLVTCGILSG 58
+ D Q DR +D+ +G+KSTA+LFG + + GVM++ LV G++ G
Sbjct: 184 IYDTQYAMVDRDDDLKIGVKSTAVLFGQADRAIIGVLQGVMLAVLVAAGLVVG 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,368,048
Number of Sequences: 539616
Number of extensions: 1087065
Number of successful extensions: 3614
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3420
Number of HSP's gapped (non-prelim): 214
length of query: 92
length of database: 191,569,459
effective HSP length: 62
effective length of query: 30
effective length of database: 158,113,267
effective search space: 4743398010
effective search space used: 4743398010
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)