BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1910
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q16QL3|COQ2_AEDAE 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Aedes
aegypti GN=coq2 PE=3 SV=1
Length = 441
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 126/151 (83%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR+D+PIGSWLLFWPCGWSI+++A GC PDL TL LFG GA IMRGAGCTIND+WD+DI
Sbjct: 123 MRIDRPIGSWLLFWPCGWSIALSAPAGCWPDLWTLTLFGAGAFIMRGAGCTINDMWDRDI 182
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D KV+RT++RPLV G +++ DA FL QLG GLLIL++LN Y+I+LG++SL V +YPL
Sbjct: 183 DGKVARTRNRPLVAGELTSADAWFFLGAQLGVGLLILLELNWYSIVLGASSLGLVIIYPL 242
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
MKR+THW QL LGMTFN+GAL+G+SA G V
Sbjct: 243 MKRITHWPQLVLGMTFNWGALLGWSATQGSV 273
>sp|Q298G6|COQ2_DROPS 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=coq2 PE=3
SV=1
Length = 397
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 122/152 (80%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR+D+PIG++LLFWPC WSI+++A GC PDL L LFG GA+IMRGAGCTINDLWDKDI
Sbjct: 90 MRIDRPIGTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWDKDI 149
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D+KV RT+ RPL +G IS DAI+FL+ QL GLL+LVQLN +I+LG++SL V YPL
Sbjct: 150 DAKVERTRTRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVITYPL 209
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCVN 152
MKRVT+W QL LGM FN+GAL+G+ A G VN
Sbjct: 210 MKRVTYWPQLVLGMAFNWGALLGWCATQGSVN 241
>sp|Q9VHS7|COQ2_DROME 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Drosophila melanogaster GN=Coq2 PE=2 SV=1
Length = 392
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 122/152 (80%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR+D+PIG++LLFWPC WSI+++A GC PDL L LFG GA+IMRGAGCTINDLWDKDI
Sbjct: 84 MRIDRPIGTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWDKDI 143
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D+KV RT+ RPL +G IS DAI+FL+ QL GLL+LVQLN +I+LG++SL V YPL
Sbjct: 144 DAKVERTRLRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVITYPL 203
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCVN 152
MKRVT+W QL LGM FN+GAL+G+ A G VN
Sbjct: 204 MKRVTYWPQLVLGMAFNWGALLGWCATQGSVN 235
>sp|Q2KIQ4|COQ2_BOVIN 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Bos
taurus GN=COQ2 PE=2 SV=1
Length = 371
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 119/152 (78%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MRLDKPIG+WLL+ PC WSI +AA PGCLPD + L+LFG GAV+MRGAGCTIND+WD+D
Sbjct: 78 MRLDKPIGTWLLYLPCTWSIGLAADPGCLPDWYMLSLFGTGAVLMRGAGCTINDMWDRDY 137
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D KV+RT RP+ G IST + +FL GQL L +L+ LN Y+I LG+ SLL VT YPL
Sbjct: 138 DKKVTRTASRPIAAGDISTFRSFVFLGGQLTLALGVLLCLNYYSIALGAASLLLVTTYPL 197
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCVN 152
MKR+T+W QL LG+TFN+GAL+G+SAV G +
Sbjct: 198 MKRITYWPQLALGLTFNWGALLGWSAVKGSCD 229
>sp|Q499N4|COQ2_RAT 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Rattus
norvegicus GN=Coq2 PE=2 SV=1
Length = 374
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 114/152 (75%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MRLDKPIG+WLL+ PC WSI +AA PGC PD + L+LFG GA++MRGAGCTIND+WD+D
Sbjct: 78 MRLDKPIGTWLLYLPCTWSIGLAADPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDRDF 137
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D KV RT +RP+ G IS + +FL QL L +L+ LN Y+I +G+ SLL V YPL
Sbjct: 138 DKKVERTANRPIAAGDISAFQSFVFLGAQLTLALGVLLHLNYYSIAMGAASLLLVVTYPL 197
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCVN 152
MKRVT W QL LG+TFN+GAL+G+SAV G +
Sbjct: 198 MKRVTFWPQLALGLTFNWGALLGWSAVKGSCD 229
>sp|Q66JT7|COQ2_MOUSE 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Mus
musculus GN=Coq2 PE=2 SV=2
Length = 374
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 117/152 (76%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MRLDKPIG+WLL+ PC WSI +AA PGC PD + L+LFG GA++MRGAGCTIND+WD+D
Sbjct: 78 MRLDKPIGTWLLYLPCTWSIGLAADPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDRDF 137
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D KV+RT +RP+ G IST + +FL GQL L +L+ LN Y+I +G+ SLL V YPL
Sbjct: 138 DKKVTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIAMGAASLLLVVTYPL 197
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCVN 152
+KR+T W QL LG+TFN+GAL+G+SAV G +
Sbjct: 198 VKRITFWPQLALGLTFNWGALLGWSAVKGSCD 229
>sp|Q96H96|COQ2_HUMAN 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Homo
sapiens GN=COQ2 PE=1 SV=1
Length = 371
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 118/152 (77%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MRLDKPIG+WLL+ PC WSI +AA PGC PD + L+LFG GA++MRGAGCTIND+WD+D
Sbjct: 78 MRLDKPIGTWLLYLPCTWSIGLAAEPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDQDY 137
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D KV+RT +RP+ G IST + +FL GQL L +L+ LN Y+I LG+ SLL V YPL
Sbjct: 138 DKKVTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIALGAGSLLLVITYPL 197
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCVN 152
MKR+++W QL LG+TFN+GAL+G+SA+ G +
Sbjct: 198 MKRISYWPQLALGLTFNWGALLGWSAIKGSCD 229
>sp|Q54U71|COQ2_DICDI 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Dictyostelium discoideum GN=coq2 PE=3 SV=1
Length = 463
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/152 (55%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+DKPIG WLL +PC WSIS+AA G PDL T+ +FG+GA +MR AGC IND+ D D
Sbjct: 176 RVDKPIGVWLLLYPCCWSISLAAPAGSFPDLKTMLVFGIGAYVMRSAGCVINDMADYKFD 235
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGL-LILVQLNLYTIILGSTSLLFVTLYPL 120
SKV RTK RP+ + ++ ++IFL GQL A LIL LN YTI L ++SL V LYP
Sbjct: 236 SKVERTKTRPIASKQLTHKQSLIFLGGQLLASFGLILSSLNYYTIALCASSLPIVVLYPF 295
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCVN 152
MKR T++ Q LG+ FN+GAL GYSA+ G N
Sbjct: 296 MKRFTYYPQFVLGLAFNWGALAGYSAIAGSCN 327
>sp|Q8I7J4|COQ2_CAEEL 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Caenorhabditis elegans GN=coq-2 PE=2 SV=2
Length = 356
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 110/149 (73%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR+DKPIG+WLL+WPC WSI+MA G LP ++ L+LFG GA +MR AGC INDLWDKD
Sbjct: 69 MRVDKPIGTWLLYWPCTWSIAMATPAGQLPSIYMLSLFGAGAFLMRSAGCVINDLWDKDF 128
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D KV RTK RPL GS++ AI LAG L + L IL+QLN Y++ +G++S+ V YPL
Sbjct: 129 DKKVERTKLRPLACGSLTEKQAIGLLAGLLSSSLAILLQLNWYSVAVGASSMALVVGYPL 188
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTG 149
KR T+W Q LG+TFN+GAL+G+ A+ G
Sbjct: 189 AKRFTYWPQFVLGLTFNWGALLGWCALKG 217
>sp|Q93YP7|4HPT_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Arabidopsis thaliana GN=PPT1 PE=2 SV=1
Length = 407
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 113/150 (75%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
RLDKPIG+WLL WPC WSI++AA PG LP +ALFG GA+++RGAGCTINDL D+DID
Sbjct: 132 RLDKPIGTWLLAWPCMWSIALAADPGSLPSFKYMALFGCGALLLRGAGCTINDLLDQDID 191
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
+KV RTK RP+ +G ++ I FL QL GL IL+QLN Y+ +LG++SLL V YPLM
Sbjct: 192 TKVDRTKLRPIASGLLTPFQGIGFLGLQLLLGLGILLQLNNYSRVLGASSLLLVFSYPLM 251
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR T W Q LG+T N+GAL+G++AV G +
Sbjct: 252 KRFTFWPQAFLGLTINWGALLGWTAVKGSI 281
>sp|Q10252|COQ2_SCHPO 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=coq2 PE=1 SV=2
Length = 360
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 107/156 (68%), Gaps = 5/156 (3%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAV---PGCLPDLHTLALFGLGAVIMRGAGCTINDLWDK 58
R P G++LL+ PC WSI MAA + LALFG+G+ +MR AGC INDLWD+
Sbjct: 73 RAGSPTGTYLLYSPCTWSILMAAYAYDSSLVNVTKMLALFGVGSFLMRSAGCVINDLWDR 132
Query: 59 DIDSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLY 118
++D+KV R+K RPL +G +S AI L+ QL A L IL+QLN YTI LG SL+ V +Y
Sbjct: 133 ELDAKVERSKSRPLASGKLSVRQAISLLSVQLTASLGILLQLNPYTIKLGVASLVPVCIY 192
Query: 119 PLMKRVTHWAQLTLGMTFNYGALMGYSAVTG--CVN 152
P MKR+T++ Q+ LG+TF YGA+MG+ A+ G C+N
Sbjct: 193 PAMKRITYYPQVVLGLTFGYGAVMGWPALAGEACMN 228
>sp|Q8W404|PGT2_LITER 4-hydroxybenzoate geranyltransferase 2 OS=Lithospermum
erythrorhizon GN=PGT-2 PE=1 SV=1
Length = 306
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 103/150 (68%), Gaps = 2/150 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
RLDKPIGSWLL WP WS+++ A G LP + LA+FG AV +RGAGCTIND +D+D D
Sbjct: 33 RLDKPIGSWLLAWPAFWSVALIADLGSLPKM--LAIFGWWAVWIRGAGCTINDYFDRDFD 90
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
KV RTK RPL +G++S + +LA QL GL +L Q N+ T+ L + FV YPLM
Sbjct: 91 KKVERTKSRPLASGAVSPAKGLWWLAFQLFIGLGVLYQFNILTLALAIVHVPFVFAYPLM 150
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR+T+W Q LG+ ++GAL+G SA+ G V
Sbjct: 151 KRITYWPQAFLGVMISWGALLGSSALKGSV 180
>sp|Q8W405|PGT1_LITER 4-hydroxybenzoate geranyltransferase 1 OS=Lithospermum
erythrorhizon GN=PGT-1 PE=1 SV=1
Length = 307
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 103/150 (68%), Gaps = 2/150 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
RLDKPIGSWLL WP WS+++AA LP + LA+FG AV +RGAGCTIND +D++ D
Sbjct: 34 RLDKPIGSWLLAWPAFWSVALAADLESLPKM--LAIFGWWAVWIRGAGCTINDYFDRNFD 91
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
KV RTK RPL +G++S + +LA QL GL +L Q N+ T+ L + FV YPLM
Sbjct: 92 KKVERTKSRPLASGAVSPAQGLWWLAFQLFIGLGVLYQFNVLTLALAIVHVPFVFAYPLM 151
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR+T+W Q LG+ ++GAL+G SA+ G V
Sbjct: 152 KRITYWPQAFLGVMISWGALLGSSALKGSV 181
>sp|Q15ZT9|UBIA_PSEA6 4-hydroxybenzoate octaprenyltransferase OS=Pseudoalteromonas
atlantica (strain T6c / ATCC BAA-1087) GN=ubiA PE=3 SV=2
Length = 285
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKP+GS+LL WP W++ +AA LP H +F G +MR AGC IND D+ +
Sbjct: 13 MRADKPVGSYLLLWPTLWALMIAA--QGLPPWHITGIFMAGVFVMRSAGCVINDYADRKV 70
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D KV RTK RPLV+G ++ A+ A +G L+++ LN TI+L +L ++YP
Sbjct: 71 DGKVDRTKARPLVSGVVTEKQALGLFATLVGVAFLLVLALNWQTIVLSLGALALASVYPF 130
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
MKR TH+ Q+ LG F + M + AVT V
Sbjct: 131 MKRYTHFPQVVLGAAFGWAIPMAFMAVTEAV 161
>sp|P32378|COQ2_YEAST 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ2 PE=1 SV=1
Length = 372
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 94/150 (62%), Gaps = 3/150 (2%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHT---LALFGLGAVIMRGAGCTINDLWD 57
MRL+KP+G+WLL+ PC WSI M A+ T L +FG+GA++MRGAGCTIND D
Sbjct: 87 MRLEKPVGTWLLYLPCSWSILMGAMMQGATLSATAGMLGIFGVGALVMRGAGCTINDFLD 146
Query: 58 KDIDSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTL 117
+ +D +V R+ +RP+ +G +S A++FL Q G+ +L L LG SL V
Sbjct: 147 RKLDQRVIRSVERPIASGRVSPRRALVFLGAQTLVGMGVLSLLPAQCWWLGLASLPIVFT 206
Query: 118 YPLMKRVTHWAQLTLGMTFNYGALMGYSAV 147
YPL KR T++ Q L FN+GAL+G+ A+
Sbjct: 207 YPLFKRFTYYPQAALSACFNWGALLGFPAM 236
>sp|B5FCB4|UBIA_VIBFM 4-hydroxybenzoate octaprenyltransferase OS=Vibrio fischeri (strain
MJ11) GN=ubiA PE=3 SV=1
Length = 287
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+++PIGS LL WP W++ +AA LPD H L +F LG V MR AGC IND D+ +D
Sbjct: 14 RMNRPIGSLLLLWPTLWALFLAA--DGLPDWHVLIVFVLGVVFMRSAGCVINDFADRKVD 71
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT +RPL +G IS+ +A+ F A + L+++ +N TI+L S ++ YP M
Sbjct: 72 GHVKRTANRPLPSGLISSKEALSFFAVLVVCSFLLVLTMNTLTIMLSSIGIVLAIAYPFM 131
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KRVT+ Q LG+ F++ M Y+A + V
Sbjct: 132 KRVTYLPQFVLGLAFSWAIPMAYAAESNQV 161
>sp|B0BPA2|UBIA_ACTPJ 4-hydroxybenzoate octaprenyltransferase OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=ubiA PE=3
SV=1
Length = 293
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKPIG+ LL +P W++ AA G +P L L +F LG ++MR AGC IND D+ I
Sbjct: 21 MRFDKPIGTLLLLYPTLWALFAAA--GGMPPLSVLVIFVLGVIVMRAAGCVINDYADRHI 78
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D +V RT RPL G ++TT+A I L ++ + LN YT +L ++ +YP
Sbjct: 79 DGEVKRTSQRPLATGRVTTTEAKILFVLLLCIAFVLDLLLNRYTFLLSFVAVALAIIYPF 138
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVT 148
MKR TH Q+ LGM F + M Y AV+
Sbjct: 139 MKRFTHLPQVVLGMAFGWAIPMAYGAVS 166
>sp|O52366|UBIA_PROST 4-hydroxybenzoate octaprenyltransferase OS=Providencia stuartii
GN=ubiA PE=3 SV=1
Length = 288
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR+D+PIGS LL WP W++ +AA +P LH L +F G +MR AGC IND D+
Sbjct: 17 MRIDRPIGSLLLLWPTYWALWIAA--QSIPSLHILIVFTAGVFLMRAAGCVINDFADRHF 74
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V RTK RPL +G ++ +A I A +G L+++ LN TI L L +YP
Sbjct: 75 DGHVERTKHRPLPSGDVTEKEAKILFASLVGLSFLLVLTLNSMTIWLSVAGLALAWIYPF 134
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVT 148
+KRV+H Q+ LG F + MG+SAV+
Sbjct: 135 VKRVSHLLQVVLGAAFGWSIPMGFSAVS 162
>sp|B3H1F9|UBIA_ACTP7 4-hydroxybenzoate octaprenyltransferase OS=Actinobacillus
pleuropneumoniae serotype 7 (strain AP76) GN=ubiA PE=3
SV=1
Length = 293
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKPIG+ LL P W++ AA G +P L L +F LG ++MR AGC IND D+ I
Sbjct: 21 MRFDKPIGTLLLLHPTLWALFAAA--GGMPPLSVLVIFVLGVIVMRAAGCVINDYADRHI 78
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D +V RT RPL G ++TT+A I L ++ + LN YT +L ++ +YP
Sbjct: 79 DGEVKRTSQRPLATGRVTTTEAKILFVLLLCIAFVLDLLLNRYTFLLSFVAVALAIIYPF 138
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVT 148
MKR TH Q+ LGM F + M Y AV+
Sbjct: 139 MKRFTHLPQVVLGMAFGWAIPMAYGAVS 166
>sp|A3N0I2|UBIA_ACTP2 4-hydroxybenzoate octaprenyltransferase OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=ubiA PE=3
SV=1
Length = 293
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKPIG+ LL P W++ AA G +P L L +F LG ++MR AGC IND D+ I
Sbjct: 21 MRFDKPIGTLLLLHPTLWALFAAA--GGMPPLSVLVIFVLGVIVMRAAGCVINDYADRHI 78
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D +V RT RPL G ++TT+A I L ++ + LN YT +L ++ +YP
Sbjct: 79 DGEVKRTSQRPLATGRVTTTEAKILFVLLLCIAFVLDLLLNRYTFLLSFVAVALAIIYPF 138
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVT 148
MKR TH Q+ LGM F + M Y AV+
Sbjct: 139 MKRFTHLPQVVLGMAFGWAIPMAYGAVS 166
>sp|B6ENU2|UBIA_ALISL 4-hydroxybenzoate octaprenyltransferase OS=Aliivibrio salmonicida
(strain LFI1238) GN=ubiA PE=3 SV=1
Length = 285
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+++PIGS LL WP W++ +AA +PD H L +F LG V MR AGC IND D+ +D
Sbjct: 14 RMNRPIGSLLLLWPTLWALFLAA--DGIPDWHVLIVFILGVVFMRSAGCVINDFADRKVD 71
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT +RPL +G +S+ +A+I + + ++++ +N TI+L S +L YP M
Sbjct: 72 GHVKRTANRPLPSGLVSSKEALILFSVLVTCSFILVLTMNTLTIMLSSIGVLLAIAYPFM 131
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR+T+ Q LG+ F++ M Y+A + V
Sbjct: 132 KRITYLPQFVLGLAFSWAIPMAYAAESNQV 161
>sp|Q48AL9|UBIA_COLP3 4-hydroxybenzoate octaprenyltransferase OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=ubiA PE=3
SV=1
Length = 287
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+DKPIG++LL WP W++ +A+ P+L L +F LG IMR AGC IND D+ ID
Sbjct: 17 RMDKPIGTYLLLWPTYWALWIAS--DGWPNLQLLLVFSLGVFIMRSAGCVINDYADRKID 74
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
+V RTK+RPLVNG +++ +AI +G +++ L+ TI L ++L +YP M
Sbjct: 75 GEVERTKNRPLVNGMMTSGEAINLFGVLIGMAFGLVLMLSWSTIYLSVVAVLLAAIYPFM 134
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR T QL LG F++G +M +S G +
Sbjct: 135 KRHTQLPQLFLGAAFSWGMIMAFSEAQGEI 164
>sp|Q5E207|UBIA_VIBF1 4-hydroxybenzoate octaprenyltransferase OS=Vibrio fischeri (strain
ATCC 700601 / ES114) GN=ubiA PE=3 SV=1
Length = 285
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+++PIGS LL WP W++ +AA LPD H L +F LG V MR AGC IND D+ +D
Sbjct: 14 RMNRPIGSLLLLWPTLWALFLAA--DGLPDWHVLIVFVLGVVFMRSAGCVINDFADRKVD 71
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT +RPL +G IS+ +A+ A + L+++ +N TI+L ++ YP M
Sbjct: 72 GHVKRTANRPLPSGLISSKEALSLFAVLVVCSFLLVLTMNTLTIMLSGIGIVLAIAYPFM 131
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KRVT+ Q LG+ F++ M Y+A + V
Sbjct: 132 KRVTYLPQFVLGLAFSWAIPMAYAAESNQV 161
>sp|Q4ZLB4|UBIA_PSEU2 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas syringae pv.
syringae (strain B728a) GN=ubiA PE=3 SV=1
Length = 296
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+DKPIG +LL WP W++ +A P L T+ +F LG +MR AGC IND D+ +D
Sbjct: 24 RIDKPIGVYLLLWPTLWAVWIAGKGA--PSLQTVCIFVLGVFLMRAAGCVINDFADRKVD 81
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT+ RPLV+G +S +A++ A +G ++++ N TI L L YP M
Sbjct: 82 GHVKRTEQRPLVSGKVSPREALVLFAVLVGLSFVLVLFTNAATIWLSFGGLALAASYPFM 141
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTG 149
KR T++ Q+ LG F++G M ++A TG
Sbjct: 142 KRYTYYPQVVLGAAFSWGMPMAFTAETG 169
>sp|Q7VL38|UBIA_HAEDU 4-hydroxybenzoate octaprenyltransferase OS=Haemophilus ducreyi
(strain 35000HP / ATCC 700724) GN=ubiA PE=3 SV=1
Length = 277
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKPIG+ LL P W++ AA G +P L +F LG ++MR AGC IND D+ I
Sbjct: 4 MRFDKPIGTLLLLHPTLWALFAAA--GGIPSSSILIIFILGVIVMRAAGCVINDYADRHI 61
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D KV RT RPL G ++T +A + L L+ + LN Y +L ++ +YP
Sbjct: 62 DGKVKRTSQRPLATGRVTTVEAKVLFFVLLIIAFLLDLSLNQYAFLLSFVAVALAVIYPF 121
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAV 147
MKR TH Q+ LGM F + M Y AV
Sbjct: 122 MKRFTHLPQVVLGMAFGWAIPMAYGAV 148
>sp|A6VEG6|UBIA_PSEA7 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas aeruginosa
(strain PA7) GN=ubiA PE=3 SV=1
Length = 296
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
+RLD+PIG +LL WP WS+ +AA G +P+L L +F LG +MR AGC IND D+D
Sbjct: 23 VRLDRPIGIYLLLWPTLWSLWIAA--GGVPELKNLLIFVLGVTLMRAAGCVINDFADRDF 80
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V+RTK RPL G IS +A I + +++ N TI L ++ +LYP
Sbjct: 81 DGHVARTKARPLATGKISVREAWITFTILVALSFGLVLLTNAPTIWLSFGAVAVASLYPF 140
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTG 149
MKR T++ Q+ LG +++G LM ++A G
Sbjct: 141 MKRYTYYPQVVLGAAYSWGILMAFTAERG 169
>sp|Q87KM9|UBIA_VIBPA 4-hydroxybenzoate octaprenyltransferase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=ubiA PE=3 SV=1
Length = 284
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR+D+PIGS LL WP W++ +AA +P L +F LG +MR AGC IND D+ +
Sbjct: 13 MRMDRPIGSLLLLWPTVWALVIAA--QGIPSWDVLIVFVLGVFLMRSAGCVINDFADRKV 70
Query: 61 DSKVSRTKDRPLVNGSISTTDAI-IFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYP 119
D V RTK RPL +G ++ +AI +FL + + LL+L +N TI L L+ +YP
Sbjct: 71 DGHVKRTKQRPLPSGKVTAKEAIGLFLVLAVSSFLLVLT-MNPLTIQLSFAGLVLAFIYP 129
Query: 120 LMKRVTHWAQLTLGMTFNYGALMGYSAVTG 149
MKR TH QL LG+ F++ M ++A TG
Sbjct: 130 FMKRYTHIPQLFLGLAFSWAIPMAWAAQTG 159
>sp|Q2NR07|UBIA_SODGM 4-hydroxybenzoate octaprenyltransferase OS=Sodalis glossinidius
(strain morsitans) GN=ubiA PE=3 SV=1
Length = 290
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR+DKPIGS LL WP W++ +A + +P L TL +F LG MR AGC IND D+ I
Sbjct: 17 MRIDKPIGSLLLLWPTLWALWLAGM--AIPALGTLTVFILGVFFMRAAGCVINDYADRKI 74
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V RT+ RPL +G+I +A + +G +++ LN TI L + +L +YP
Sbjct: 75 DGHVKRTRARPLPSGAIGEKEAKLLFGALVGISFALVLTLNSMTIALSTVALALAWVYPF 134
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVT 148
MKR TH QL LG F + M ++AV+
Sbjct: 135 MKRYTHLPQLVLGAAFGWSIPMVFTAVS 162
>sp|Q02E04|UBIA_PSEAB 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=ubiA PE=3 SV=1
Length = 296
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
+RLD+PIG +LL WP WS+ +AA +P+L L +F LG ++MR AGC IND D++
Sbjct: 23 VRLDRPIGIYLLLWPTLWSLWIAA--DGVPELKNLLIFVLGVILMRAAGCVINDFADRNF 80
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V+RTK RPL G IS +A I A + +++ N T+ L ++ +LYP
Sbjct: 81 DGHVARTKARPLATGKISVREAWITFAVLVALSFGLVLLTNATTVWLSFGAVAVASLYPF 140
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTG 149
MKR T++ Q+ LG +++G LM ++A G
Sbjct: 141 MKRYTYYPQVVLGAAYSWGILMAFTAERG 169
>sp|Q9HTK0|UBIA_PSEAE 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=ubiA PE=3 SV=1
Length = 296
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
+RLD+PIG +LL WP WS+ +AA +P+L L +F LG ++MR AGC IND D++
Sbjct: 23 VRLDRPIGIYLLLWPTLWSLWIAA--DGVPELKNLLIFVLGVILMRAAGCVINDFADRNF 80
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V+RTK RPL G IS +A I A + +++ N T+ L ++ +LYP
Sbjct: 81 DGHVARTKARPLATGKISVREAWITFAVLVALSFGLVLLTNATTVWLSFGAVAVASLYPF 140
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTG 149
MKR T++ Q+ LG +++G LM ++A G
Sbjct: 141 MKRYTYYPQVVLGAAYSWGILMAFTAERG 169
>sp|B7V5P9|UBIA_PSEA8 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas aeruginosa
(strain LESB58) GN=ubiA PE=3 SV=1
Length = 296
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
+RLD+PIG +LL WP WS+ +AA +P+L L +F LG ++MR AGC IND D++
Sbjct: 23 VRLDRPIGIYLLLWPTLWSLWIAA--DGVPELKNLLIFVLGVILMRAAGCVINDFADRNF 80
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V+RTK RPL G IS +A I A + +++ N T+ L ++ +LYP
Sbjct: 81 DGHVARTKARPLATGKISVREAWITFAVLVALSFGLVLLTNATTVWLSFGAVAVASLYPF 140
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTG 149
MKR T++ Q+ LG +++G LM ++A G
Sbjct: 141 MKRYTYYPQVVLGAAYSWGILMAFTAERG 169
>sp|A5CXV6|UBIA_VESOH 4-hydroxybenzoate octaprenyltransferase OS=Vesicomyosocius okutanii
subsp. Calyptogena okutanii (strain HA) GN=ubiA PE=3
SV=2
Length = 273
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MRLD PIG +LL WP W++ +A+ PDL L +F LG V+MR AGC IND D+ I
Sbjct: 1 MRLDNPIGIYLLLWPTLWALFLAS--EGFPDLKLLLIFVLGVVLMRSAGCVINDYADRYI 58
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V RTK RP+ +G I A+ F + L+++ N TI L ++L LYP
Sbjct: 59 DKLVERTKHRPITSGEIHHRSALKFFVLLIMLAFLLVLLTNWLTIQLAMIAVLLAILYPF 118
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSA 146
KR T++ Q LG+ F LM +SA
Sbjct: 119 TKRWTYFPQFVLGLAFAMSVLMAFSA 144
>sp|A4Y0P0|UBIA_PSEMY 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas mendocina
(strain ymp) GN=ubiA PE=3 SV=1
Length = 296
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MRLDKPIG +LL WP W++ +AA +P L +F G ++MR AGC IND D++
Sbjct: 23 MRLDKPIGIYLLLWPTLWALWVAA--EGVPSAKNLFIFVFGVILMRAAGCVINDYADRNF 80
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D VSRT+ RPL +G I +A++ A + A ++++ N TI L L YP
Sbjct: 81 DGHVSRTRARPLASGKIQPREALVLFAVLVTASFVLVLFTNATTIWLSFGGLALAACYPF 140
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
MKR T + Q+ LG F++G M ++A TG +
Sbjct: 141 MKRYTFYPQVVLGAAFSWGMPMAFTAETGSL 171
>sp|Q21DY7|UBIA_SACD2 4-hydroxybenzoate octaprenyltransferase OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=ubiA PE=3 SV=1
Length = 299
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MRLD+PIG +L+ WP WS+ +AA LPD L +F LG V+MR AGC IND D+ I
Sbjct: 25 MRLDRPIGIYLVLWPTLWSLWIAA--DGLPDWDVLVIFVLGVVLMRSAGCVINDFADRKI 82
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V RT +RPLV G I+ A++F L ++++ N TI L L YP
Sbjct: 83 DGHVRRTANRPLVTGLITPKQAVLFFVALLVIAFILVLFTNPLTIKLSFGGALLAFCYPF 142
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCVNE 153
MKR T Q+ LG F + M ++A T + E
Sbjct: 143 MKRYTQLPQIVLGAAFAWSIPMAFAAQTNQLPE 175
>sp|Q48BQ5|UBIA_PSE14 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=ubiA PE=3 SV=1
Length = 296
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+DKPIG +LL WP W++ +A P L T+ +F +G +MR AGC IND D+ +D
Sbjct: 24 RIDKPIGIYLLLWPTLWAVWIAGKGS--PSLKTVFIFVVGVFLMRAAGCVINDFADRKVD 81
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT+ RPL++G +S+ +A+ A +G ++++ N TI L L YP M
Sbjct: 82 GHVKRTEQRPLISGKVSSREALALFAVLVGLSFVLVLFTNATTIWLSFGGLALAACYPFM 141
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTG 149
KR T++ Q+ LG F++G M ++A TG
Sbjct: 142 KRYTYYPQVVLGAAFSWGMPMAFTAETG 169
>sp|A7N0X0|UBIA_VIBHB 4-hydroxybenzoate octaprenyltransferase OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=ubiA PE=3 SV=1
Length = 284
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 4/150 (2%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR+D+PIGS LL WP W++ +AA +P + L +F LG +MR AGC IND D+ +
Sbjct: 13 MRMDRPIGSLLLLWPTVWALVIAA--QGMPSWNVLIVFVLGVFLMRSAGCVINDFADRKV 70
Query: 61 DSKVSRTKDRPLVNGSISTTDAI-IFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYP 119
D V RTK RPL +G +++ +AI +FL + + LL+L +N TI L + +YP
Sbjct: 71 DGHVKRTKQRPLPSGKVTSKEAIGLFLVLGISSFLLVLT-MNPLTIKLSFAGIFLAFIYP 129
Query: 120 LMKRVTHWAQLTLGMTFNYGALMGYSAVTG 149
MKR T+ QL LG+ F++ M ++A TG
Sbjct: 130 FMKRYTYLPQLFLGLAFSWAIPMAWAAQTG 159
>sp|B0TRE7|UBIA_SHEHH 4-hydroxybenzoate octaprenyltransferase OS=Shewanella halifaxensis
(strain HAW-EB4) GN=ubiA PE=3 SV=1
Length = 287
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+D+PIG+ LL WPC +++ AA G LPDL +F +G V+MR GC IND D+D+D
Sbjct: 15 RMDRPIGTLLLLWPCLMALTFAA--GGLPDLKVFIIFVIGVVVMRACGCIINDYADRDLD 72
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILV-QLNLYTIILGSTSLLFVTLYPL 120
S V RTK RPL +G IS+ +A++ L G +G LV LN + L ++ +YP
Sbjct: 73 SHVERTKARPLASGEISSKEALL-LFGVMGLFAFSLVLMLNPLVVQLSVVGIILTIIYPF 131
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR T+ Q+ LG +++ M Y+A TG V
Sbjct: 132 TKRYTNMPQMFLGTVWSWSIPMAYAAQTGTV 162
>sp|Q1QSG2|UBIA_CHRSD 4-hydroxybenzoate octaprenyltransferase OS=Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
13768) GN=ubiA PE=3 SV=1
Length = 298
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
RLD+PIG+WLL WP W++ +AA +P+ TL +F +G +MR AGC +ND D+ D
Sbjct: 25 RLDRPIGTWLLMWPTLWALWLAA--EGIPERGTLLIFVIGVYVMRAAGCVVNDYADRHFD 82
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT+DRPL G I+ +A + AG + ++ NL T++L +L YP M
Sbjct: 83 GHVKRTRDRPLATGRITEKEAKVLFAGLVIIAFGLVCLTNLPTVLLSFAALALAATYPFM 142
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR TH+ Q+ LG F++G M + A+ V
Sbjct: 143 KRYTHFPQVVLGAAFSWGIPMAFMAIQRQV 172
>sp|C3K4C4|UBIA_PSEFS 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas fluorescens
(strain SBW25) GN=ubiA PE=3 SV=1
Length = 296
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+DKPIG +LL WP W++ +A P L + +F LG V+ R GC IND D+ +D
Sbjct: 24 RMDKPIGIYLLLWPTLWALWIAGKGS--PSLINIVIFVLGVVLTRAGGCVINDWADRKVD 81
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT+ RPLV+G IS+ +A++F A +G L+++ N TI+L L YP M
Sbjct: 82 GHVKRTEQRPLVSGKISSKEALVFFAVLMGISFLLVLLTNATTILLSLGGLALAASYPFM 141
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTG 149
KR T++ Q+ LG F++G M ++A TG
Sbjct: 142 KRYTYYPQVVLGAAFSWGMPMAFTAETG 169
>sp|Q87U39|UBIA_PSESM 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=ubiA PE=3 SV=1
Length = 296
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+DKPIG +LL WP W++ +A P L+T+ +F G +MR AGC IND D+ +D
Sbjct: 24 RIDKPIGIYLLLWPTLWAVWIAGKGS--PSLNTVFIFVAGVFLMRAAGCVINDFADRKVD 81
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT+ RPLV+G +S+ +A++ A + ++++ N TI L L YP M
Sbjct: 82 GHVKRTEQRPLVSGKVSSREALVLFAVLVSLSFVLVLFTNSTTIWLSFGGLALAACYPFM 141
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTG 149
KR T++ Q+ LG F++G M ++A TG
Sbjct: 142 KRYTYYPQVVLGAAFSWGMPMAFTAETG 169
>sp|A1WVM9|UBIA_HALHL 4-hydroxybenzoate octaprenyltransferase OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=ubiA PE=3 SV=2
Length = 280
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
RLD+PIG++LL WP W++ +AA +PDL L +F LG V+MR AGC IND D+ ID
Sbjct: 9 RLDRPIGNFLLLWPVLWALWIAA--AGVPDLDLLVIFTLGVVVMRAAGCVINDFADRHID 66
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPLM 121
V RT+ RP G +S +A++ +++ N TI++ +++ YP
Sbjct: 67 GHVKRTRQRPFATGRVSEREALLLFVVLCLLAFGLVLLTNPLTILMSLVAVVLAATYPFT 126
Query: 122 KRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR TH Q+ LG+ F + M ++A TG V
Sbjct: 127 KRYTHLPQVHLGLAFGWAVPMVFAAQTGTV 156
>sp|B6J612|UBIA_COXB1 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain CbuK_Q154) GN=ubiA PE=3 SV=1
Length = 287
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKP+G +LL WP W++ +AA P +F G+V+MR AGC +ND D+ +
Sbjct: 15 MRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAGCIVNDFADRHL 72
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V RT+ RPL +GS+S T+A++ A +++ LN T+ L +L +YP
Sbjct: 73 DKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAVIGILLALVYPF 132
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
+KR TH QL LG+ F++ M ++A G V
Sbjct: 133 LKRFTHLPQLWLGIAFSWSIPMAFAATVGHV 163
>sp|A8FQF8|UBIA_SHESH 4-hydroxybenzoate octaprenyltransferase OS=Shewanella sediminis
(strain HAW-EB3) GN=ubiA PE=3 SV=1
Length = 286
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 92/152 (60%), Gaps = 6/152 (3%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+D+PIG+ LL WPC ++ +AA G +PDL L +F G V+MR GC IND D+D+D
Sbjct: 15 RMDRPIGTLLLLWPCLMALLLAA--GGMPDLKVLTIFIFGVVVMRACGCIINDYADRDLD 72
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLA--GQLGAGLLILVQLNLYTIILGSTSLLFVTLYP 119
+ V RTK RPL +G ++ +A+I A G GL+++ LN + L ++ +YP
Sbjct: 73 AHVDRTKSRPLASGEVTGREALILFAVMGLFAFGLVLM--LNPLVVKLSVVGIILTIIYP 130
Query: 120 LMKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR T+ Q+ LG+ +++ M Y+A TG V
Sbjct: 131 FTKRFTNMPQMFLGVVWSWSIPMAYAAQTGEV 162
>sp|A3QIF2|UBIA_SHELP 4-hydroxybenzoate octaprenyltransferase OS=Shewanella loihica
(strain ATCC BAA-1088 / PV-4) GN=ubiA PE=3 SV=1
Length = 286
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 92/152 (60%), Gaps = 6/152 (3%)
Query: 2 RLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDID 61
R+D+PIG++LL WPC ++ +AA G +PDL L +F +G V+MR GC IND D+ +D
Sbjct: 15 RMDRPIGTFLLLWPCLMALVLAA--GGMPDLKVLIIFVIGVVVMRACGCIINDYADRKLD 72
Query: 62 SKVSRTKDRPLVNGSISTTDAIIFLA--GQLGAGLLILVQLNLYTIILGSTSLLFVTLYP 119
S V RTK RPL +G ++ +A+I G L GL+++ LN + L ++ +YP
Sbjct: 73 SHVERTKSRPLASGEVTVKEALILFVVMGLLAFGLVLM--LNPLVVQLSFVGIILTIIYP 130
Query: 120 LMKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
KR T+ Q+ LG+ +++ M Y+A G V
Sbjct: 131 FTKRFTNMPQMFLGVVWSWSIPMAYAAQLGTV 162
>sp|A9N9X0|UBIA_COXBR 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=ubiA PE=3 SV=1
Length = 287
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKP+G +LL WP W++ +AA P +F G+V+MR AGC +ND D+ +
Sbjct: 15 MRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAGCIVNDFADRHL 72
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V RT+ RPL +GS+S T+A++ A +++ LN T+ L +L +YP
Sbjct: 73 DKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAVIGILLALVYPF 132
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
+KR TH QL LG+ F++ M ++A G V
Sbjct: 133 LKRFTHLPQLWLGVAFSWSIPMAFAATVGHV 163
>sp|Q8PDE8|UBIA_XANCP 4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris
pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=ubiA PE=3 SV=1
Length = 301
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
+R D+PIGS LL WP W++ +AA G LP L TL +F G + R AGC IND D+ +
Sbjct: 28 VRGDRPIGSLLLLWPTWWALWLAA--GGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWL 85
Query: 61 DSKVSRTKDRPLVNGSISTTDAI-IFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYP 119
D V RTK RPL G++S +A+ +F+ L A L+L LN T+ L L YP
Sbjct: 86 DPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVL-SLNWLTVALSVPGLFLAASYP 144
Query: 120 LMKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
+KR TH Q+ LGM F +G MG++AV G V
Sbjct: 145 YLKRHTHLPQVYLGMAFGWGIPMGFAAVQGSV 176
>sp|B0RMR4|UBIA_XANCB 4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris
pv. campestris (strain B100) GN=ubiA PE=3 SV=1
Length = 301
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
+R D+PIGS LL WP W++ +AA G LP L TL +F G + R AGC IND D+ +
Sbjct: 28 VRGDRPIGSLLLLWPTWWALWLAA--GGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWL 85
Query: 61 DSKVSRTKDRPLVNGSISTTDAI-IFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYP 119
D V RTK RPL G++S +A+ +F+ L A L+L LN T+ L L YP
Sbjct: 86 DPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVL-SLNWLTVALSVPGLFLAASYP 144
Query: 120 LMKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
+KR TH Q+ LGM F +G MG++AV G V
Sbjct: 145 YLKRHTHLPQVYLGMAFGWGIPMGFAAVQGSV 176
>sp|Q4UZN6|UBIA_XANC8 4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris
pv. campestris (strain 8004) GN=ubiA PE=3 SV=1
Length = 301
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
+R D+PIGS LL WP W++ +AA G LP L TL +F G + R AGC IND D+ +
Sbjct: 28 VRGDRPIGSLLLLWPTWWALWLAA--GGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWL 85
Query: 61 DSKVSRTKDRPLVNGSISTTDAI-IFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYP 119
D V RTK RPL G++S +A+ +F+ L A L+L LN T+ L L YP
Sbjct: 86 DPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVL-SLNWLTVALSVPGLFLAASYP 144
Query: 120 LMKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
+KR TH Q+ LGM F +G MG++AV G V
Sbjct: 145 YLKRHTHLPQVYLGMAFGWGIPMGFAAVQGSV 176
>sp|Q83F93|UBIA_COXBU 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=ubiA PE=3 SV=1
Length = 287
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKP+G +LL WP W++ +AA P +F G+V+MR AGC +ND D+ +
Sbjct: 15 MRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAGCIVNDFADRHL 72
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V RT+ RPL +GS+S T+A++ A +++ LN T+ L +L +YP
Sbjct: 73 DKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAVIGILLALVYPF 132
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
+KR TH QL LG+ F++ M ++A G V
Sbjct: 133 LKRFTHLPQLWLGVAFSWSIPMAFAATVGHV 163
>sp|A9KGW7|UBIA_COXBN 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=ubiA PE=3 SV=1
Length = 287
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 1 MRLDKPIGSWLLFWPCGWSISMAAVPGCLPDLHTLALFGLGAVIMRGAGCTINDLWDKDI 60
MR DKP+G +LL WP W++ +AA P +F G+V+MR AGC +ND D+ +
Sbjct: 15 MRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAGCIVNDFADRHL 72
Query: 61 DSKVSRTKDRPLVNGSISTTDAIIFLAGQLGAGLLILVQLNLYTIILGSTSLLFVTLYPL 120
D V RT+ RPL +GS+S T+A++ A +++ LN T+ L +L +YP
Sbjct: 73 DKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAVIGILLALVYPF 132
Query: 121 MKRVTHWAQLTLGMTFNYGALMGYSAVTGCV 151
+KR TH QL LG+ F++ M ++A G V
Sbjct: 133 LKRFTHLPQLWLGVAFSWSIPMAFAATVGHV 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,787,491
Number of Sequences: 539616
Number of extensions: 1971293
Number of successful extensions: 6706
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 5621
Number of HSP's gapped (non-prelim): 833
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)