Query psy1912
Match_columns 77
No_of_seqs 113 out of 847
Neff 5.1
Searched_HMMs 13730
Date Fri Aug 16 19:28:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1912.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1912hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c4ka1 c.61.1.2 (A:7-166) PRP 22.7 6.3 0.00046 24.6 -0.6 9 41-49 95-103 (160)
2 d1u9ya1 c.61.1.2 (A:1-155) Pho 20.1 7.5 0.00055 24.1 -0.7 15 40-54 89-103 (155)
3 d1dkua1 c.61.1.2 (A:8-166) Pho 19.2 8.6 0.00062 23.9 -0.6 11 41-51 92-102 (159)
4 d1jw9b_ c.111.1.1 (B:) Molybde 15.0 42 0.0031 20.6 2.1 27 50-76 50-76 (247)
5 d2c1ha1 c.1.10.3 (A:10-328) 5- 12.3 40 0.0029 23.3 1.5 19 43-61 58-77 (319)
6 d1gzga_ c.1.10.3 (A:) 5-aminol 11.1 51 0.0037 22.8 1.7 18 44-61 64-82 (329)
7 d1l6sa_ c.1.10.3 (A:) 5-aminol 10.2 56 0.0041 22.5 1.6 18 44-61 62-80 (323)
8 d1h7na_ c.1.10.3 (A:) 5-aminol 9.1 73 0.0053 22.0 1.9 18 44-61 73-91 (340)
9 d1pv8a_ c.1.10.3 (A:) 5-aminol 8.5 73 0.0053 21.8 1.7 18 44-61 53-71 (320)
10 d1t33a1 a.4.1.9 (A:1-88) Putat 6.2 75 0.0054 16.5 0.6 46 24-71 17-64 (88)
No 1
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.68 E-value=6.3 Score=24.55 Aligned_cols=9 Identities=22% Similarity=0.553 Sum_probs=7.8
Q ss_pred hhccChHHH
Q psy1912 41 YAHQVRIHL 49 (77)
Q Consensus 41 YA~QD~edD 49 (77)
||.||+++.
T Consensus 95 YaRQDk~~~ 103 (160)
T d2c4ka1 95 YSKQSKMRK 103 (160)
T ss_dssp TTTTTSCCS
T ss_pred hhhcccccc
Confidence 999999874
No 2
>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=20.08 E-value=7.5 Score=24.08 Aligned_cols=15 Identities=20% Similarity=-0.002 Sum_probs=10.8
Q ss_pred HhhccChHHHHHcCc
Q psy1912 40 IYAHQVRIHLIDLCE 54 (77)
Q Consensus 40 IYA~QD~edD~k~Gv 54 (77)
-||.||+.+.-..-+
T Consensus 89 ~YaRQDr~~~~ge~i 103 (155)
T d1u9ya1 89 AYARQDKKFNPGEAI 103 (155)
T ss_dssp TTCSCSSCSSTTBCC
T ss_pred hhhccccccCCCCcc
Confidence 399999987655444
No 3
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=19.16 E-value=8.6 Score=23.86 Aligned_cols=11 Identities=36% Similarity=0.247 Sum_probs=8.7
Q ss_pred hhccChHHHHH
Q psy1912 41 YAHQVRIHLID 51 (77)
Q Consensus 41 YA~QD~edD~k 51 (77)
||.||+++--.
T Consensus 92 YsRQDr~~~~g 102 (159)
T d1dkua1 92 YARQDRKARSR 102 (159)
T ss_dssp TTTCCSCSSTT
T ss_pred hhhhccccCCC
Confidence 99999987543
No 4
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}
Probab=14.96 E-value=42 Score=20.64 Aligned_cols=27 Identities=7% Similarity=0.101 Sum_probs=21.6
Q ss_pred HHcCcceeeeccchhhhhhhhccCCCC
Q psy1912 50 IDLCENGVNFISKSITNIDNVNRGLPY 76 (77)
Q Consensus 50 ~k~Gv~Si~fG~~~~~~~~~~~~~~~~ 76 (77)
.+.|++++..=+......+|.||-.=|
T Consensus 50 a~~Gvg~i~lvD~D~Ve~sNL~RQ~l~ 76 (247)
T d1jw9b_ 50 ASAGVGNLTLLDFDTVSLSNLQRQTLH 76 (247)
T ss_dssp HHHTCSEEEEECCCBCCGGGGGTCTTC
T ss_pred HHcCCCeEEEECCcccchhhhhhhccc
Confidence 467888888878888999999997543
No 5
>d2c1ha1 c.1.10.3 (A:10-328) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Prosthecochloris vibrioformis [TaxId: 1098]}
Probab=12.34 E-value=40 Score=23.25 Aligned_cols=19 Identities=26% Similarity=0.165 Sum_probs=16.3
Q ss_pred ccChHHHHHcCccee-eecc
Q psy1912 43 HQVRIHLIDLCENGV-NFIS 61 (77)
Q Consensus 43 ~QD~edD~k~Gv~Si-~fG~ 61 (77)
.+..|.+.++|++++ .||.
T Consensus 58 ~~~ie~~~~lGI~av~LFpv 77 (319)
T d2c1ha1 58 VEECKELYDLGIQGIDLFGI 77 (319)
T ss_dssp HHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhccCcEEEEEec
Confidence 456899999999998 8984
No 6
>d1gzga_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=11.08 E-value=51 Score=22.75 Aligned_cols=18 Identities=11% Similarity=-0.062 Sum_probs=15.6
Q ss_pred cChHHHHHcCccee-eecc
Q psy1912 44 QVRIHLIDLCENGV-NFIS 61 (77)
Q Consensus 44 QD~edD~k~Gv~Si-~fG~ 61 (77)
...|.+.++|++++ .||.
T Consensus 64 ~~ie~~~~lGI~av~LFpv 82 (329)
T d1gzga_ 64 IEAEEWVALGIPALALFPV 82 (329)
T ss_dssp HHHHHHHHHTCCEEEEEEC
T ss_pred HHHHHHHhcCcceEEEEee
Confidence 45799999999998 9995
No 7
>d1l6sa_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Escherichia coli [TaxId: 562]}
Probab=10.18 E-value=56 Score=22.47 Aligned_cols=18 Identities=11% Similarity=-0.021 Sum_probs=15.2
Q ss_pred cChHHHHHcCccee-eecc
Q psy1912 44 QVRIHLIDLCENGV-NFIS 61 (77)
Q Consensus 44 QD~edD~k~Gv~Si-~fG~ 61 (77)
...|.+.++|++++ .||.
T Consensus 62 ~eie~~~~lGI~av~LFpv 80 (323)
T d1l6sa_ 62 REIERIANAGIRSVMTFGI 80 (323)
T ss_dssp HHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHcccceeeeecc
Confidence 45689999999998 8885
No 8
>d1h7na_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=9.08 E-value=73 Score=22.02 Aligned_cols=18 Identities=17% Similarity=-0.055 Sum_probs=15.2
Q ss_pred cChHHHHHcCccee-eecc
Q psy1912 44 QVRIHLIDLCENGV-NFIS 61 (77)
Q Consensus 44 QD~edD~k~Gv~Si-~fG~ 61 (77)
...|.+.++|++++ .||.
T Consensus 73 ~eie~~~~lGI~av~LF~v 91 (340)
T d1h7na_ 73 DYLKPLVAKGLRSVILFGV 91 (340)
T ss_dssp HHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHcCCCeeecCCC
Confidence 35688999999998 9984
No 9
>d1pv8a_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.48 E-value=73 Score=21.81 Aligned_cols=18 Identities=17% Similarity=0.006 Sum_probs=15.1
Q ss_pred cChHHHHHcCccee-eecc
Q psy1912 44 QVRIHLIDLCENGV-NFIS 61 (77)
Q Consensus 44 QD~edD~k~Gv~Si-~fG~ 61 (77)
...|.+.++|++++ .||.
T Consensus 53 ~~ie~~~~lGI~ai~LFpv 71 (320)
T d1pv8a_ 53 EMLRPLVEEGLRCVLIFGV 71 (320)
T ss_dssp HHHHHHHHHTCCEEEEEEC
T ss_pred HHHHHHHHCCCCEEEEecc
Confidence 34688999999998 9985
No 10
>d1t33a1 a.4.1.9 (A:1-88) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=6.19 E-value=75 Score=16.51 Aligned_cols=46 Identities=11% Similarity=-0.133 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHhhccChHHHHHcCccee--eeccchhhhhhhhc
Q psy1912 24 LPLYLSGICWTIIYDTIYAHQVRIHLIDLCENGV--NFISKSITNIDNVN 71 (77)
Q Consensus 24 ~~L~~a~~~Wti~yDTIYA~QD~edD~k~Gv~Si--~fG~~~~~~~~~~~ 71 (77)
++=.+.-++..-|||. ..+|......++-.++ .|++|..+-.+-+.
T Consensus 17 Il~aa~~l~~~~G~~~--t~~~Ia~~agvs~~~~Y~~F~sK~~L~~a~~~ 64 (88)
T d1t33a1 17 LIAAALAQFGEYGLHA--TTRDIAALAGQNIAAITYYFGSKEDLYLACAQ 64 (88)
T ss_dssp HHHHHHHHHHHHGGGS--CHHHHHHHHTSCHHHHHHHHSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccc--CHHHHHHHhCCChhhhhccCCCHHHHHHHHHH
Confidence 4445667788889985 6788888777777778 89999888666543
Done!