BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1913
(535 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54385|DHE3_DROME Glutamate dehydrogenase, mitochondrial OS=Drosophila melanogaster
GN=Gdh PE=1 SV=2
Length = 562
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/524 (50%), Positives = 354/524 (67%), Gaps = 20/524 (3%)
Query: 27 HKIPERLKDVPDKENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIM 86
H+IP+RLKDVP ++P FF+ VEY+FHR Q + E V K T ++ + GI+M
Sbjct: 40 HQIPDRLKDVPTAKDPRFFDMVEYFFHRGCQ-IAEESLVDDMKGKLTRDEKKQKVKGILM 98
Query: 87 LMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAAL 146
LMQ ++EI FP RRD+G YE+I YR H THK+PTKGGIR++LDV+ DEVKAL+AL
Sbjct: 99 LMQPCDHIIEIAFPLRRDAGNYEMITGYRAQHSTHKTPTKGGIRFSLDVSRDEVKALSAL 158
Query: 147 MTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYN 206
MT+K +C +VPFGGAK G++I+P +Y+ ELE+ITR+F LEL KK ++GPG+DVPAPD
Sbjct: 159 MTFKCACVDVPFGGAKAGLKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMG 218
Query: 207 TSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNE 266
T REMSW D YAKT+G +INA VTGKP+ GGI GR SATGRGVF E +N
Sbjct: 219 TGEREMSWIADTYAKTIGHLDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFINEA 278
Query: 267 EYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINY 326
YM +IG P KT+IVQGFGNVG H RY R A C+ ++EHD + +G I+
Sbjct: 279 NYMSQIGTTPGWGGKTFIVQGFGNVGLHTTRYLTRAGATCIGVIEHDGTLYNPEG--IDP 336
Query: 327 KDLHTYKITKGTIKGYPGTKS-APTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEA 385
K L YK GTI GY K ++MF+K DI +PAA+EKVI NA+++QAKII EA
Sbjct: 337 KLLEDYKNEHGTIVGYQNAKPYEGENLMFEKCDIFIPAAVEKVITSENANRIQAKIIAEA 396
Query: 386 ANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISD 445
ANGP TPAA +L+ +N+L+IPD++ NAGGVTVS+FEWLKN++H S GR++F Y++E +
Sbjct: 397 ANGPTTPAADKILIDRNILVIPDLYINAGGVTVSFFEWLKNLNHVSYGRLTFKYERESNY 456
Query: 446 LLLSSIDTSLSDTFNK----------------KIRIQKSAMYEDRISNATEKDIVQSSLT 489
LL+S+ S+ N +I + S ++ RIS A+EKDIV S L
Sbjct: 457 HLLASVQQSIERIINDESVQESLERRFGRVGGRIPVTPSESFQKRISGASEKDIVHSGLD 516
Query: 490 HSMQRAGRDILEYAEKSDNKLDLRNAAYCSALFKIFKTYEEAGL 533
++M+R+ R I++ A K + LDLR AAY +++ KIF TY +AGL
Sbjct: 517 YTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFTTYRDAGL 560
>sp|P00367|DHE3_HUMAN Glutamate dehydrogenase 1, mitochondrial OS=Homo sapiens GN=GLUD1
PE=1 SV=2
Length = 558
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/518 (48%), Positives = 344/518 (66%), Gaps = 10/518 (1%)
Query: 23 PQSGHKIPERL---KDVPDKEN-PGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIA 78
PQ G + R + V D+E+ P FF+ VE +F R + + +R R+ ++E
Sbjct: 41 PQPGLALAARRHYSEAVADREDDPNFFKMVEGFFDRGASIVEDKLVEDLRTRE-SEEQKR 99
Query: 79 LRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPD 138
R GI+ +++ + +L + FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ D
Sbjct: 100 NRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVD 159
Query: 139 EVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGI 198
EVKALA+LMTYK + +VPFGGAK G++I+P Y + ELE+ITR+F +EL KK ++GPGI
Sbjct: 160 EVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGI 219
Query: 199 DVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTA 258
DVPAPD +T REMSW D YA T+G +INA VTGKP+ GGI GR SATGRGVF
Sbjct: 220 DVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHG 279
Query: 259 AEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVP 318
E +N YM +G+ P +KT++VQGFGNVG H+ RY R AKC+A+ E D +I
Sbjct: 280 IENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWN 339
Query: 319 DKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQ 378
G I+ K+L +K+ G+I G+P K I+ DIL+PAA EK + KSNA +V+
Sbjct: 340 PDG--IDPKELEDFKLQHGSILGFPKAKPYEGSILEADCDILIPAASEKQLTKSNAPRVK 397
Query: 379 AKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFG 438
AKII E ANGP TP A + L++N+++IPD++ NAGGVTVSYFEWLKN++H S GR++F
Sbjct: 398 AKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFK 457
Query: 439 YDKEISDLLLSSIDTSLSDTFNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRA 495
Y+++ + LL S+ SL F K I I +A ++DRIS A+EKDIV S L ++M+R+
Sbjct: 458 YERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERS 517
Query: 496 GRDILEYAEKSDNKLDLRNAAYCSALFKIFKTYEEAGL 533
R I+ A K + LDLR AAY +A+ K+FK Y EAG+
Sbjct: 518 ARQIMRTAMKYNLGLDLRTAAYVNAIEKVFKVYNEAGV 555
>sp|Q64HZ9|DHE4_HYLLA Glutamate dehydrogenase 2, mitochondrial OS=Hylobates lar GN=GLUD2
PE=3 SV=1
Length = 555
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/498 (48%), Positives = 335/498 (67%), Gaps = 6/498 (1%)
Query: 39 KENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQ 98
K++P FF+ VE +F R + + +R R+ ++E R GI+ +++ + +L +
Sbjct: 58 KDDPNFFKMVEGFFDRGASIVEDKLVKDLRTRE-SEEQKRNRVRGILRIIKPCNHVLSLS 116
Query: 99 FPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPF 158
FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ DEVKALA+LMTYK + +VPF
Sbjct: 117 FPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSADVSVDEVKALASLMTYKCAVVDVPF 176
Query: 159 GGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDA 218
GGAK G++I+P Y ELE+ITR+F +EL KK ++GPGIDVPAPD NT REMSW D
Sbjct: 177 GGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTGEREMSWIADT 236
Query: 219 YAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCM 278
YA T+G +INA VTGKP+ GGI GR SATGRGVF E +N YM +G+ P
Sbjct: 237 YASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGF 296
Query: 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT 338
+KT++VQGFGNVG H+ RY R AKC+A+ E D +I G I+ K+L +K+ G+
Sbjct: 297 GDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDG--IDPKELEDFKLQHGS 354
Query: 339 IKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAML 398
I G+P K I+ DIL+PAA EK + KSNA +V+AKII E ANGP TP A +
Sbjct: 355 ILGFPKAKPYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIF 414
Query: 399 LKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDT 458
L++N+++IPD++ NAGGVTVSYFEWLKN++H S GR++F Y+++ + LL S+ SL
Sbjct: 415 LERNIMVIPDLYVNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERK 474
Query: 459 FNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNA 515
F K I I +A ++D IS A+EKDIV S+L ++M+R+ R I+ A K + LDLR A
Sbjct: 475 FGKHGGTIPIVPTAEFQDSISGASEKDIVHSALAYTMERSARQIMRTAMKYNLGLDLRTA 534
Query: 516 AYCSALFKIFKTYEEAGL 533
AY +A+ K+FK Y EAG+
Sbjct: 535 AYVNAIEKVFKVYSEAGV 552
>sp|Q64I00|DHE4_PONPY Glutamate dehydrogenase 2, mitochondrial OS=Pongo pygmaeus GN=GLUD2
PE=3 SV=1
Length = 558
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/502 (48%), Positives = 336/502 (66%), Gaps = 7/502 (1%)
Query: 36 VPDKEN-PGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSL 94
V D+E+ P FF+ VE +F R + + +R ++ ++E R GI+ +++ + +
Sbjct: 57 VADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQE-SEEQKRNRVRGILRIIKPCNHV 115
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
L + FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ DEVKALA+LMTYK +
Sbjct: 116 LSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVV 175
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
+VPFGGAK G++I+P Y ELE+ITR+F +EL KK ++GPGIDVPAPD NT REMSW
Sbjct: 176 DVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTGEREMSW 235
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D YA T+G +INA VTGKP+ GGI GR SATGRGVF E +N YM +G+
Sbjct: 236 IADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSNVGM 295
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
P +KT++VQGFGNVG H+ RY R AKC+A+ E D +I G I+ K+L +++
Sbjct: 296 TPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDG--IDPKELEDFRL 353
Query: 335 TKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAA 394
G+I G+P K I+ DIL+PAA EK + KSNA +V+AKII E ANGP TP A
Sbjct: 354 QHGSILGFPKAKPYEGSILEADCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTTPEA 413
Query: 395 HAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTS 454
+ L++N+L+IPD++ NAGGVTVSYFEWLKN++H S GR++F Y+++ + LL S+ S
Sbjct: 414 DKIFLERNILVIPDVYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQES 473
Query: 455 LSDTFNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLD 511
L F K I I +A + D IS A+EKDIV S+L ++M+R+ R I+ A K + LD
Sbjct: 474 LERKFGKHGGTIPIVPTAEFRDSISGASEKDIVHSALAYTMERSARQIMHTAMKYNLGLD 533
Query: 512 LRNAAYCSALFKIFKTYEEAGL 533
LR AAY +A+ K+FK Y EAG+
Sbjct: 534 LRTAAYVNAIEKVFKVYSEAGV 555
>sp|P49448|DHE4_HUMAN Glutamate dehydrogenase 2, mitochondrial OS=Homo sapiens GN=GLUD2
PE=1 SV=2
Length = 558
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/502 (48%), Positives = 337/502 (67%), Gaps = 7/502 (1%)
Query: 36 VPDKEN-PGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSL 94
V D+E+ P FF+ VE +F R + + +R ++ ++E R GI+ +++ + +
Sbjct: 57 VADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQE-SEEQKRNRVRGILRIIKPCNHV 115
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
L + FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ DEVKALA+LMTYK +
Sbjct: 116 LSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVV 175
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
+VPFGGAK G++I+P Y ELE+ITR+F +EL KK ++GPG+DVPAPD NT REMSW
Sbjct: 176 DVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSW 235
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D YA T+G +INA VTGKP+ GGI GR SATGRGVF E +N YM +G+
Sbjct: 236 IADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGM 295
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
P +KT++VQGFGNVG H+ RY R AKC+A+ E D +I G I+ K+L +K+
Sbjct: 296 TPGFRDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDG--IDPKELEDFKL 353
Query: 335 TKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAA 394
G+I G+P K I+ DIL+PAA EK + KSNA +V+AKII E ANGP TP A
Sbjct: 354 QHGSILGFPKAKPYEGSILEVDCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTTPEA 413
Query: 395 HAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTS 454
+ L++N+L+IPD++ NAGGVTVSYFEWLKN++H S GR++F Y+++ + LL S+ S
Sbjct: 414 DKIFLERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLLSVQES 473
Query: 455 LSDTFNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLD 511
L F K I I +A ++D IS A+EKDIV S+L ++M+R+ R I+ A K + LD
Sbjct: 474 LERKFGKHGGTIPIVPTAEFQDSISGASEKDIVHSALAYTMERSARQIMHTAMKYNLGLD 533
Query: 512 LRNAAYCSALFKIFKTYEEAGL 533
LR AAY +A+ K+FK Y EAG+
Sbjct: 534 LRTAAYVNAIEKVFKVYSEAGV 555
>sp|P82264|DHE3_CHAAC Glutamate dehydrogenase, mitochondrial OS=Chaenocephalus aceratus
GN=glud1 PE=1 SV=1
Length = 504
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/503 (48%), Positives = 339/503 (67%), Gaps = 7/503 (1%)
Query: 35 DVPDK-ENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSS 93
D DK ++P FF VE +F R + + +R ++ T E R GI+ +++ +
Sbjct: 2 DAADKPDDPNFFRMVEGFFDRGASIVEDKLVEDLRTKE-TPEQKKGRVAGILRIIKPCNH 60
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
+L + FP +RD+GE+E+I+ YR H H++P KGGIRY++DV+ DEVKALA+LMTYK +
Sbjct: 61 VLSLSFPIKRDNGEWEVIEGYRAQHSQHRTPCKGGIRYSMDVSVDEVKALASLMTYKCAV 120
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
+VPFGGAK G+RI+ Y++ ELE+ITR+F +EL KK ++GPGIDVPAPD +T REMS
Sbjct: 121 VDVPFGGAKAGVRINTKNYSDNELEKITRRFTIELAKKGFIGPGIDVPAPDMSTGEREMS 180
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIG 273
W D YA T+ T+INA VTGKP+ GGI GR SATGRGVF E +N YM +G
Sbjct: 181 WIADTYANTIAHTDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFMNEASYMSMVG 240
Query: 274 LEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYK 333
L P +++KT+++QGFGNVG H+ RY R AKC+ I E D AI G I+ K L YK
Sbjct: 241 LTPGVQDKTFVIQGFGNVGLHSMRYLHRFGAKCVGIGEIDGAIYNADG--IDPKALEEYK 298
Query: 334 ITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
+ GTI G+PG K I+ DIL+PAA EK + ++NA +++AKII E ANGP TP
Sbjct: 299 LQNGTIVGFPGAKPYEGSILEADCDILIPAAGEKQLTRNNARRIKAKIIAEGANGPTTPD 358
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDT 453
A + L+ NV++IPD++ NAGGVTVSYFEWLKN++H S GR++F Y+++ + LL S+
Sbjct: 359 ADKIFLENNVMVIPDMYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQE 418
Query: 454 SLSDTFNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKL 510
SL F K+ I + +A ++ R++ A+EKDIV S L ++M+R+ R I+ A K + L
Sbjct: 419 SLERKFGKQGGPIPVVPTADFQARVAGASEKDIVHSGLAYTMERSARQIMRTASKHNLGL 478
Query: 511 DLRNAAYCSALFKIFKTYEEAGL 533
D+R AAY +A+ K+FK Y EAGL
Sbjct: 479 DIRTAAYVNAIEKVFKVYNEAGL 501
>sp|Q64HZ8|DHE4_PANTR Glutamate dehydrogenase 2, mitochondrial OS=Pan troglodytes
GN=GLUD2 PE=3 SV=1
Length = 558
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/502 (48%), Positives = 337/502 (67%), Gaps = 7/502 (1%)
Query: 36 VPDKEN-PGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSL 94
V D+E+ P FF+ VE +F R + + +R ++ ++E R GI+ +++ + +
Sbjct: 57 VADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQE-SEEQKRNRVRGILRIIKPCNHV 115
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
L + FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ DEVKALA+LMTYK +
Sbjct: 116 LSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVV 175
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
+VPFGGAK G++I+P Y ELE+ITR+F +EL KK ++GPG+DVPAPD NT REMSW
Sbjct: 176 DVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSW 235
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D YA T+G +INA VTGKP+ GGI GR SATGRGVF E +N YM +G+
Sbjct: 236 IADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGM 295
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
P +KT++VQGFGNVG H+ RY R AKC+A+ E D +I G I+ K+L +++
Sbjct: 296 TPGFRDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDG--IDPKELEDFRL 353
Query: 335 TKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAA 394
G++ G+P K I+ DIL+PAA EK + KSNA +V+AKII E ANGP TP A
Sbjct: 354 QHGSLLGFPKAKPYEGSILEIDCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTTPEA 413
Query: 395 HAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTS 454
+ L++N+L+IPD++ NAGGVTVSYFEWLKN++H S GR++F Y+++ + LL S+ S
Sbjct: 414 DKIFLERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQES 473
Query: 455 LSDTFNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLD 511
L F K I I +A ++D IS A+EKDIV S+L ++M+R+ R I+ A K + LD
Sbjct: 474 LERKFGKHGGTIPIVPTAEFQDSISGASEKDIVHSALAYTMERSARQIMHTAMKYNLGLD 533
Query: 512 LRNAAYCSALFKIFKTYEEAGL 533
LR AAY +A+ K+FK Y EAG+
Sbjct: 534 LRTAAYVNAIEKVFKVYSEAGV 555
>sp|P10860|DHE3_RAT Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus
GN=Glud1 PE=1 SV=2
Length = 558
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/498 (48%), Positives = 335/498 (67%), Gaps = 6/498 (1%)
Query: 39 KENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQ 98
+++P FF+ VE +F R + + ++ R+ +E R GI+ +++ + +L +
Sbjct: 61 EDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRE-NEEQKRNRVRGILRIIKPCNHVLSLS 119
Query: 99 FPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPF 158
FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ DEVKALA+LMTYK + +VPF
Sbjct: 120 FPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPF 179
Query: 159 GGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDA 218
GGAK G++I+P Y + ELE+ITR+F +EL KK ++GPGIDVPAPD +T REMSW D
Sbjct: 180 GGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADT 239
Query: 219 YAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCM 278
YA T+G +INA VTGKP+ GGI GR SATGRGVF E +N YM +G+ P +
Sbjct: 240 YASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGL 299
Query: 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT 338
+KT++VQGFGNVG H+ RY R AKC+ + E D +I G I+ K+L +K+ G+
Sbjct: 300 GDKTFVVQGFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDG--IDPKELEDFKLQHGS 357
Query: 339 IKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAML 398
I G+P K I+ DIL+PAA EK + KSNA +V+AKII E ANGP TP A +
Sbjct: 358 ILGFPKAKVYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIF 417
Query: 399 LKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDT 458
L++N+++IPD++ NAGGVTVSYFEWLKN++H S GR++F Y+++ + LL S+ SL
Sbjct: 418 LERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERK 477
Query: 459 FNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNA 515
F K I + +A ++DRIS A+EKDIV S L ++M+R+ R I+ A K + LDLR A
Sbjct: 478 FGKHGGTIPVVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTA 537
Query: 516 AYCSALFKIFKTYEEAGL 533
AY +A+ K+FK Y EAG+
Sbjct: 538 AYVNAIEKVFKVYNEAGV 555
>sp|P26443|DHE3_MOUSE Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus GN=Glud1
PE=1 SV=1
Length = 558
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/498 (48%), Positives = 335/498 (67%), Gaps = 6/498 (1%)
Query: 39 KENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQ 98
+++P FF+ VE +F R + + ++ R+ ++E R GI+ +++ + +L +
Sbjct: 61 EDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRE-SEEQKRNRVRGILRIIKPCNHVLSLS 119
Query: 99 FPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPF 158
FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ DEVKALA+LMTYK + +VPF
Sbjct: 120 FPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPF 179
Query: 159 GGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDA 218
GGAK G++I+P Y + ELE+ITR+F +EL KK ++GPGIDVPAPD +T REMSW D
Sbjct: 180 GGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADT 239
Query: 219 YAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCM 278
YA T+G +INA VTGKP+ GGI GR SATGRGVF E +N YM +G+ P
Sbjct: 240 YASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGF 299
Query: 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT 338
+KT++VQGFGNVG H+ RY R AKC+ + E D +I G I+ K+L +K+ G+
Sbjct: 300 GDKTFVVQGFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDG--IDPKELEDFKLQHGS 357
Query: 339 IKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAML 398
I G+P K I+ DIL+PAA EK + KSNA +V+AKII E ANGP TP A +
Sbjct: 358 ILGFPKAKVYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIF 417
Query: 399 LKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDT 458
L++N+++IPD++ NAGGVTVSYFEWLKN++H S GR++F Y+++ + LL S+ SL
Sbjct: 418 LERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERK 477
Query: 459 FNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNA 515
F K I + +A ++DRIS A+EKDIV S L ++M+R+ R I+ A K + LDLR A
Sbjct: 478 FGKHGGTIPVVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTA 537
Query: 516 AYCSALFKIFKTYEEAGL 533
AY +A+ K+FK Y EAG+
Sbjct: 538 AYVNAIEKVFKVYNEAGV 555
>sp|Q64I01|DHE4_GORGO Glutamate dehydrogenase 2, mitochondrial OS=Gorilla gorilla gorilla
GN=GLUD2 PE=3 SV=1
Length = 558
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/502 (48%), Positives = 336/502 (66%), Gaps = 7/502 (1%)
Query: 36 VPDKEN-PGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSL 94
V D+E+ P FF+ VE +F R + + +R ++ ++E R GI+ +++ + +
Sbjct: 57 VADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQE-SEEQKRNRVRGILRIIKPCNHV 115
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
L + FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ DEVKALA+LMTYK +
Sbjct: 116 LSLCFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVV 175
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
+VPFGGAK G++I+P Y ELE+ITR+F +EL KK ++GPG+DVPAPD NT REMSW
Sbjct: 176 DVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSW 235
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D YA T+G +INA VTGKP+ GGI GR SATGRGVF E +N YM +G+
Sbjct: 236 IADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGM 295
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
P +KT++VQGFGNVG H+ RY R AKC+A+ E D +I G I+ K+L +++
Sbjct: 296 TPGFRDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDG--IDPKELEDFRL 353
Query: 335 TKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAA 394
G+I G+P K I+ DIL+PAA EK + KSNA +V+AKII E ANGP TP A
Sbjct: 354 QHGSILGFPKAKPYEGSILEVDCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTTPEA 413
Query: 395 HAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTS 454
+ ++N+L+IPD++ NAGGVTVSYFEWLKN++H S GR++F Y+++ + LL S+ S
Sbjct: 414 DRIFQERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQES 473
Query: 455 LSDTFNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLD 511
L F K I I +A ++D IS A+EKDIV S+L ++M+R+ R I+ A K + LD
Sbjct: 474 LERKFGKHGGTIPIVPTADFQDSISGASEKDIVHSALAYTMERSARQIMHTAMKYNLGLD 533
Query: 512 LRNAAYCSALFKIFKTYEEAGL 533
LR AAY +A+ K+FK Y EAG+
Sbjct: 534 LRTAAYVNAIEKVFKVYSEAGV 555
>sp|P00366|DHE3_BOVIN Glutamate dehydrogenase 1, mitochondrial OS=Bos taurus GN=GLUD1
PE=1 SV=2
Length = 558
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/518 (47%), Positives = 340/518 (65%), Gaps = 10/518 (1%)
Query: 23 PQSGHKIPERL---KDVPDKEN-PGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIA 78
PQ G P R + D+E+ P FF+ VE +F R + + ++ R+ T+E
Sbjct: 41 PQPGLVPPARRHYSEAAADREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRE-TEEQKR 99
Query: 79 LRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPD 138
R I+ +++ + +L + FP RRD G +E+I+ YR H H++P KGGIRY+ DV+ D
Sbjct: 100 NRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVD 159
Query: 139 EVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGI 198
EVKALA+LMTYK + +VPFGGAK G++I+P Y + ELE+ITR+F +EL KK ++GPG+
Sbjct: 160 EVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGV 219
Query: 199 DVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTA 258
DVPAPD +T REMSW D YA T+G +INA VTGKP+ GGI GR SATGRGVF
Sbjct: 220 DVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHG 279
Query: 259 AEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVP 318
E +N YM +G+ P +KT++VQGFGNVG H+ RY R AKC+ + E D +I
Sbjct: 280 IENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWN 339
Query: 319 DKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQ 378
G I+ K+L +K+ GTI G+P K I+ DIL+PAA EK + KSNA +V+
Sbjct: 340 PDG--IDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQLTKSNAPRVK 397
Query: 379 AKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFG 438
AKII E ANGP TP A + L++N+++IPD++ NAGGVTVSYFEWL N++H S GR++F
Sbjct: 398 AKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFK 457
Query: 439 YDKEISDLLLSSIDTSLSDTFNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRA 495
Y+++ + LL S+ SL F K I I +A ++DRIS A+EKDIV S L ++M+R+
Sbjct: 458 YERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERS 517
Query: 496 GRDILEYAEKSDNKLDLRNAAYCSALFKIFKTYEEAGL 533
R I+ A K + LDLR AAY +A+ K+F+ Y EAG+
Sbjct: 518 ARQIMRTAMKYNLGLDLRTAAYVNAIEKVFRVYNEAGV 555
>sp|P00368|DHE3_CHICK Glutamate dehydrogenase 1, mitochondrial OS=Gallus gallus GN=GLUD1
PE=1 SV=1
Length = 503
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/503 (46%), Positives = 331/503 (65%), Gaps = 8/503 (1%)
Query: 35 DVPDKEN-PGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSS 93
+ DKE+ P FF+ VE +F R + + +R R+ + E R GI+ +++ +
Sbjct: 2 ZAADKEDDPNFFKMVEGFFDRGASIVEDKLVEGLRTRQ-SMEQRRHRVRGILRIIKPCNH 60
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
+L + FP +RD GZ+E+I+ YR H ++P KGGIRY+LDV+ DEVKALA+LMTYK +
Sbjct: 61 VLSVSFPIKRDDGZWEVIEGYRAQHSHQRTPCKGGIRYSLDVSVDEVKALASLMTYKCAV 120
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
+VPFGGAK G++I+P Y + +LE+ITR+F +EL KK ++GPG+DVPAP+ +T REMS
Sbjct: 121 VDVPFGGAKAGVKINPKNYTDEDLEKITRRFTMELAKKGFIGPGVDVPAPNMSTGEREMS 180
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIG 273
W D YA T+G +INA VT + GGI GR SATGRG+F E + N YM +G
Sbjct: 181 WIADTYASTIGHYDINAHACVTKPGISQGGIHGRISATGRGLFGHIENFIENASYMSILG 240
Query: 274 LEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYK 333
+ P +KT+ VQGFGNVG H+ RY R AKC+A+ E D +I G I+ K+L YK
Sbjct: 241 MTPGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGEFDGSIWNPDG--IDPKELEDYK 298
Query: 334 ITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
+ GTI G+P + I+ DIL+PAA EK + K+NA KV+AKII E ANGP TP
Sbjct: 299 LQHGTIMGFPKAQKLEGSILETDCDILIPAASEKQLTKANAHKVKAKIIAEGANGPTTPQ 358
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDT 453
A + L++N+++IPD++ NAGGVTVS FZ KN++H S GR++F Y+++ + LL S+
Sbjct: 359 ADKIFLERNIMVIPDLYLNAGGVTVSAFZZ-KNLNHVSYGRLTFKYERDSNYHLLMSVQE 417
Query: 454 SLSDTFNKK---IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKL 510
SL F K I + +A ++DRIS A+EKDIV S L ++M+R+ R I+ A K + L
Sbjct: 418 SLERKFGKHGGTIPVVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGL 477
Query: 511 DLRNAAYCSALFKIFKTYEEAGL 533
DLR AAY +A+ K+FK Y EAGL
Sbjct: 478 DLRTAAYVNAIEKVFKVYNEAGL 500
>sp|Q54KB7|DHE3_DICDI Glutamate dehydrogenase, mitochondrial OS=Dictyostelium discoideum
GN=gluD PE=1 SV=1
Length = 502
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/495 (40%), Positives = 297/495 (60%), Gaps = 37/495 (7%)
Query: 42 PGFFESVEYYFHRA--VQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQF 99
P F E + +F +A + NL P G++ M+ + L ++F
Sbjct: 37 PRFLECFKTFFDKAAGLTNLKP---------------------GVLNNMKECNVALRVEF 75
Query: 100 PFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFG 159
P + + G+ ++I YR H H+ P KGGIR++ +V+ EV ALA+LMTYK + +VPFG
Sbjct: 76 PIKNEHGDVDIIAGYRAQHSHHRLPCKGGIRFSEEVDLQEVMALASLMTYKCAVVDVPFG 135
Query: 160 GAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAY 219
GAKGG+RIDP KY + E+ITR + L L +KN++GPG+DVPAPD T +EM+W D Y
Sbjct: 136 GAKGGVRIDPKKYTVAQREKITRAYTLLLCQKNFIGPGVDVPAPDMGTGEQEMAWIRDTY 195
Query: 220 AKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCME 279
+ + +++++ VTGKP+ GGIRGR ATG GVF ++ EE + + GL P ++
Sbjct: 196 -QAFNTNDVDSMACVTGKPISSGGIRGRTEATGLGVFYGIREFLSYEEVLKKTGLTPGIK 254
Query: 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTI 339
K+ ++QGFGNVG+ AA++F + AK +A+ EH+ A+ G +N L+ YK+ GT
Sbjct: 255 GKSIVIQGFGNVGYFAAKFFEQAGAKVIAVAEHNGAVYNADG--LNIDALNKYKLQHGTF 312
Query: 340 KGYPGTKSAPTDIMFDKV--DILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAM 397
+PG + + ++ DIL+PAA+EK I N +QAK+I EAANGP+TP A +
Sbjct: 313 IDFPGATNIVDSVKALEIPCDILIPAALEKQIHIGNVADIQAKLIGEAANGPMTPRADQI 372
Query: 398 LLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSD 457
LL + +IIPD+ NAGGVTVSYFEWLKN+SH GR++ +++ LLL +++
Sbjct: 373 LLNRGHVIIPDLLLNAGGVTVSYFEWLKNLSHVRFGRLNKKWEESSKKLLLEFVES---- 428
Query: 458 TFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAAY 517
T NKK+ + ++ I A E DIV+S L +MQ A + + A + + D R+AA
Sbjct: 429 TVNKKLSEAERSLI---IHGADEIDIVRSGLEDTMQNACAETRKTANEKNT--DYRSAAL 483
Query: 518 CSALFKIFKTYEEAG 532
+A+ KI YE +G
Sbjct: 484 YNAIMKIKAVYESSG 498
>sp|P96110|DHE3_THEMA Glutamate dehydrogenase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=gdhA PE=1 SV=4
Length = 416
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 242/400 (60%), Gaps = 37/400 (9%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
+L ++FP R D G E+ YR H + P KGGIRY DV DEVKALA MT+K +
Sbjct: 37 VLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDEVKALAFWMTWKTAV 96
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
N+PFGG KGG+R+DP K + ELER++R+F E+ + +GP D+PAPD NT+A M+
Sbjct: 97 MNLPFGGGKGGVRVDPKKLSRNELERLSRRFFSEI--QVIIGPYNDIPAPDVNTNADVMA 154
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIG 273
W+ D Y+ +G T LG+VTGKP+ LGG +GRE ATGRGV A + M +G
Sbjct: 155 WYMDTYSMNVGHT---VLGIVTGKPVELGGSKGREEATGRGVKVCAGLA------MDVLG 205
Query: 274 LEPCMENKTYIVQGFGNVGFHAARYFRRGR-AKCLAIVEHDTAIVPDKGTEINYKDLHTY 332
++P + T VQGFGNVG AA + +K +A+ + I +G ++ ++L Y
Sbjct: 206 IDP--KKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDV--EELIRY 261
Query: 333 KITKGTIKGYP-GTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLT 391
K GT+ YP G + +++ VDILVPAA+E I NA++++AK +VE ANGP T
Sbjct: 262 KKEHGTVVTYPKGERITNEELLELDVDILVPAALEGAIHAGNAERIKAKAVVEGANGPTT 321
Query: 392 PAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSI 451
P A +L ++ +L++PDI ANAGGVTVSYFEW++++ SF +D D + +++
Sbjct: 322 PEADEILSRRGILVVPDILANAGGVTVSYFEWVQDLQ-------SFFWD---LDQVRNAL 371
Query: 452 DTSLSDTFNKKIRIQ-------KSAMY---EDRISNATEK 481
+ + FN ++++ ++A Y DR++ AT+K
Sbjct: 372 EKMMKGAFNDVMKVKEKYNVDMRTAAYILAIDRVAYATKK 411
>sp|Q43314|DHE1_ARATH Glutamate dehydrogenase 1 OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1
Length = 411
Score = 256 bits (653), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 225/393 (57%), Gaps = 31/393 (7%)
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
++++ +D G +R H + P KGGIRY +V+PDEV ALA LMT+K + +
Sbjct: 35 IKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
+P+GGAKGGI DPSK + ELER+TR F ++ + +G DVPAPD T + M+W
Sbjct: 95 KIPYGGAKGGIGCDPSKLSISELERLTRVFTQKI--HDLIGIHTDVPAPDMGTGPQTMAW 152
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D Y+K G + +VTGKP+ LGG GR++ATGRGV E L+N
Sbjct: 153 ILDEYSKFHGYSP----AVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNEHGK------ 202
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
+ + +++QGFGNVG AA+ K +A+ + AI G +I HT K
Sbjct: 203 --TISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITGAIKNKDGIDIPALLKHT-KE 259
Query: 335 TKGTIKGYPGTKSA-PTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
+G +KG+ G P I+ + DILVPAA+ VI + NA++++AK I+EAAN P P
Sbjct: 260 HRG-VKGFDGADPIDPNSILVEDCDILVPAALGGVINRENANEIKAKFIIEAANHPTDPD 318
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKE-ISDLLLSSID 452
A +L KK V+I+PDI+AN+GGVTVSYFEW++NI F +++E ++D L + +
Sbjct: 319 ADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQ-------GFMWEEEKVNDELKTYMT 371
Query: 453 TSLSD------TFNKKIRIQKSAMYEDRISNAT 479
S D T + +R+ + +R++ AT
Sbjct: 372 RSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQAT 404
>sp|Q9LEC8|DHEB_NICPL Glutamate dehydrogenase B OS=Nicotiana plumbaginifolia GN=GDHB PE=2
SV=1
Length = 411
Score = 255 bits (652), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 224/393 (56%), Gaps = 31/393 (7%)
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
++++ +D G +R H + P KGGIRY +V+PDEV ALA LMT+K + +
Sbjct: 35 IKVECTIPKDDGSLATFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
N+P+GGAKGGI PS + ELER+TR F ++ + +G DVPAPD T+ + M+W
Sbjct: 95 NIPYGGAKGGIGCSPSDLSISELERLTRVFTQKI--HDLIGVHTDVPAPDMGTNPQTMAW 152
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D Y+K G + +VTGKP+ LGG GR++ATGRGV AAE L+ +
Sbjct: 153 ILDEYSKFHGYSP----AVVTGKPIDLGGSLGRDAATGRGVLFAAEALLRDHG------- 201
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
+ + ++VQGFGNVG AA+ K +A+ + AI G +I H K
Sbjct: 202 -KSIAGQRFVVQGFGNVGSWAAQLITEQGGKIVAVSDITGAIKNKNGIDIASLLKHV-KE 259
Query: 335 TKGTIKGYPGTKSA-PTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
+G +KG+ G S P I+ + D+L+PAA+ VI + NA ++AK IVEAAN P P
Sbjct: 260 NRG-VKGFHGADSIDPNSILVEDCDVLIPAALGGVINRDNAKDIKAKFIVEAANHPTDPE 318
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKE-ISDLLLSSID 452
A +L KK V+I+PDI+AN+GGVTVSYFEW++NI F +D+E ++ L + ++
Sbjct: 319 ADEILAKKGVVILPDIYANSGGVTVSYFEWVQNIQ-------GFMWDEERVNTELKAYMN 371
Query: 453 TSLSD------TFNKKIRIQKSAMYEDRISNAT 479
D T N +R+ + +R++ AT
Sbjct: 372 RGFKDVKDMCKTHNCDLRMGAFTLGVNRVARAT 404
>sp|Q38946|DHE2_ARATH Glutamate dehydrogenase 2 OS=Arabidopsis thaliana GN=GDH2 PE=1 SV=1
Length = 411
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 227/394 (57%), Gaps = 31/394 (7%)
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
++++ +D G +R H + P KGGIRY +V+PDEV ALA LMT+K + +
Sbjct: 35 IKVECTIPKDDGTLVSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
++P+GGAKGGI P + ELER+TR F ++ + +G DVPAPD T+A+ M+W
Sbjct: 95 DIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKI--HDLIGIHTDVPAPDMGTNAQTMAW 152
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D Y+K G ++ +VTGKP+ LGG GRE+ATGRGV A E L+ EY I
Sbjct: 153 ILDEYSKFHG----HSPAVVTGKPIDLGGSLGREAATGRGVVFATEALL--AEYGKSI-- 204
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
+ T+++QGFGNVG AA+ K +A+ + AI +G +IN L +K
Sbjct: 205 ----QGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINA--LIKHKD 258
Query: 335 TKGTIKGYPGTKSAPTD-IMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
G++ + G + +D ++ + D+L+P A+ V+ K NA V+AK IVEAAN P P
Sbjct: 259 ATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAGDVKAKFIVEAANHPTDPD 318
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDT 453
A +L KK V+I+PDI+ANAGGVTVSYFEW++NI F +++E +L L T
Sbjct: 319 ADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQ-------GFMWEEEKVNLELQKYMT 371
Query: 454 -------SLSDTFNKKIRIQKSAMYEDRISNATE 480
++ T + +R+ + +R++ AT+
Sbjct: 372 RAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQ 405
>sp|Q9S7A0|DHE3_ARATH Probable glutamate dehydrogenase 3 OS=Arabidopsis thaliana GN=GSH3
PE=1 SV=1
Length = 411
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 222/393 (56%), Gaps = 31/393 (7%)
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
++++ +D G +R H + P KGGIRY +V PDEV ALA LMT+K + +
Sbjct: 35 IKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVEPDEVNALAQLMTWKTAVA 94
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
+P+GGAKGGI DPS+ + ELER+TR F ++ + +G DVPAPD T + M+W
Sbjct: 95 KIPYGGAKGGIGCDPSELSLSELERLTRVFTQKI--HDLIGIHTDVPAPDMGTGPQTMAW 152
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D Y+K G ++ +VTGKP+ LGG GR++ATGRGV A E L+N
Sbjct: 153 ILDEYSKFHG----HSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG------- 201
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
+ + + +QGFGNVG AA+ K +A+ + AI + G +I L +
Sbjct: 202 -KTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSDVTGAIKNNNGIDI-LSLLEHAEE 259
Query: 335 TKGTIKGYPGTKSA-PTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
+G IKG+ G S P I+ + DILVPAA+ VI + NA++++AK I+E AN P P
Sbjct: 260 NRG-IKGFDGADSIDPDSILVEDCDILVPAALGGVINRENANEIKAKFIIEGANHPTDPE 318
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDT 453
A +L KK V+I+PDI+AN+GGVTVSYFEW++NI F +D+E + L + T
Sbjct: 319 ADEILKKKGVMILPDIYANSGGVTVSYFEWVQNIQ-------GFMWDEEKVNRELKTYMT 371
Query: 454 -------SLSDTFNKKIRIQKSAMYEDRISNAT 479
+ T + +R+ + +R++ AT
Sbjct: 372 RGFKDLKEMCQTHSCDLRMGAFTLGINRVAQAT 404
>sp|Q43260|DHE3_MAIZE Glutamate dehydrogenase OS=Zea mays GN=GDH1 PE=1 SV=1
Length = 411
Score = 252 bits (643), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 208/349 (59%), Gaps = 24/349 (6%)
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
++++ +D G +R H + P KGGIRY +V+PDEV ALA LMT+K + +
Sbjct: 35 IKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVA 94
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
N+P+GGAKGGI P + ELER+TR F ++ + +G DVPAPD T+++ M+W
Sbjct: 95 NIPYGGAKGGIGCSPGDLSISELERLTRVFTQKI--HDLIGIHTDVPAPDMGTNSQTMAW 152
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D Y+K G + +VTGKP+ LGG GR++ATGRGV A E L + E G
Sbjct: 153 ILDEYSKFHGYSP----AVVTGKPVDLGGSLGRDAATGRGVLFATEAL------LAEHG- 201
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
+ + +++QGFGNVG AA+ K +AI + A+ G +I H+ +
Sbjct: 202 -KGIAGQRFVIQGFGNVGSWAAQLISEAGGKVIAISDVTGAVKNVDGLDIAQLVKHSAE- 259
Query: 335 TKGTIKGYPGTKS-APTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
KG IKG+ G + AP ++ ++ D+L+PAA+ VI K NA+ ++AK I+EAAN P P
Sbjct: 260 NKG-IKGFKGGDAIAPDSLLTEECDVLIPAALGGVINKDNANDIKAKYIIEAANHPTDPE 318
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKE 442
A +L KK VLI+PDI AN+GGVTVSYFEW++NI F +D+E
Sbjct: 319 ADEILSKKGVLILPDILANSGGVTVSYFEWVQNIQ-------GFMWDEE 360
>sp|P29051|DHE41_HALSI NAD-specific glutamate dehydrogenase A OS=Halobacterium salinarum
GN=gdhA PE=1 SV=1
Length = 435
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 225/438 (51%), Gaps = 64/438 (14%)
Query: 96 EIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSN 155
E+ P RD G E+ YR H + + P KGG+RY DV DE L MT+K + +
Sbjct: 60 EVTIPIERDDGTVEVFTGYRAQHDSVRGPYKGGLRYHPDVTRDECVGLGMWMTWKCAVMD 119
Query: 156 VPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWF 215
+PFGGAKGG+ ++P + + E ER+TR+F E+ ++ +GP D+PAPD T + M+W
Sbjct: 120 LPFGGAKGGVAVNPKELSPEEKERLTRRFTQEI--RDVIGPNQDIPAPDMGTDPQTMAWL 177
Query: 216 YDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLE 275
DAY+ G T G+VTGKP +GG GRE A GR V +++ CE +
Sbjct: 178 MDAYSMQEGETT---PGVVTGKPPVVGGSEGREEAPGRSVAIITQLV-------CEYYDQ 227
Query: 276 PCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335
P ++ T VQG+G+VG +AAR + A +AI + + A+ G I+ + ++
Sbjct: 228 P-LDETTVAVQGYGSVGANAARLLDKWGATIVAISDVNGAMYEPDG--IDTASVPSHDEE 284
Query: 336 KGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAH 395
+ Y T + +++ VD+L+PAA+ VI K NA+ + A ++VE ANGP T A
Sbjct: 285 PEAVTTYADTVISNEELLTLDVDVLIPAALGNVITKENAEAIAADLVVEGANGPTTSTAD 344
Query: 396 AMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSL 455
++L ++V +IPDI ANAGGVTVSYFEWL++I+ R ++ ++
Sbjct: 345 SILADRDVAVIPDILANAGGVTVSYFEWLQDIN-----RRAWSLER-------------- 385
Query: 456 SDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNA 515
V L MQ A R + + E D + R+A
Sbjct: 386 ----------------------------VNDELEAEMQAAWRAVKDEYENRD--VTWRDA 415
Query: 516 AYCSALFKIFKTYEEAGL 533
AY AL +I + +E GL
Sbjct: 416 AYIVALSRIAEAHEARGL 433
>sp|P93541|DHE3_SOLLC Glutamate dehydrogenase OS=Solanum lycopersicum GN=GDH1 PE=2 SV=1
Length = 412
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 225/405 (55%), Gaps = 45/405 (11%)
Query: 95 LEIQFPFR---------RDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAA 145
L + PFR +D G +R H + P KGGIRY +V+PDEV ALA
Sbjct: 26 LSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQ 85
Query: 146 LMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDY 205
LMT+K + +N+P+GGAKGGI PS + ELER+TR F ++ + +G DVPAPD
Sbjct: 86 LMTWKTAVANIPYGGAKGGIGCSPSDLSISELERLTRVFTQKI--HDLIGIHTDVPAPDM 143
Query: 206 NTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNN 265
T+ + M+W D Y+K G + +VTGKP+ LGG GR++ATGRG A E L+N
Sbjct: 144 GTNPQTMAWILDEYSKFHGYSP----AVVTGKPVDLGGSLGRDAATGRGALFATEALLNE 199
Query: 266 EEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEIN 325
+ + +++QGFGNVG AA+ K +A+ + AI +KG +I
Sbjct: 200 H--------GKSVAGQRFVIQGFGNVGSWAAKLIHEQGGKVVAVSDITGAIKNEKGIDIE 251
Query: 326 YKDLHTYKITKGTIKGYPGTKSAPTD---IMFDKVDILVPAAIEKVIRKSNAD-KVQAKI 381
H K T+G +KG+ + P D I+ + D+L+PAA+ VI K N K++AK
Sbjct: 252 SLFKHV-KETRG-VKGF--HDAHPIDANSILVEDCDVLIPAALGGVINKDNHKLKIKAKY 307
Query: 382 IVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYD- 440
I+EAAN P P A +L KK V I+PDI+AN+GGVTVSYFEW++NI F +D
Sbjct: 308 IIEAANHPTDPEADEILSKKGVTILPDIYANSGGVTVSYFEWVQNIQ-------GFMWDE 360
Query: 441 KEISDLLLSSIDTSLSD------TFNKKIRIQKSAMYEDRISNAT 479
K+++D L + + D T N +R+ + +R++ AT
Sbjct: 361 KKVNDELKTYMTRGFKDVKDMCKTHNCDLRMGAFTLGVNRVARAT 405
>sp|P80053|DHE2_SULSO Glutamate dehydrogenase 2 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=gdhA-2 PE=1 SV=3
Length = 420
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 223/394 (56%), Gaps = 30/394 (7%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
+++++ R G+ + +R H + P KGG+RY +V DEV+AL+ +MT+KNS
Sbjct: 41 IIQVKIQIRGSDGKLKTFMGWRSQHNSALGPYKGGVRYHPNVTQDEVEALSMIMTWKNSL 100
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
+P+GG KGG+R+DP K ELE+++RK+ + K Y+G +D+PAPD NT ++ M+
Sbjct: 101 LLLPYGGGKGGVRVDPKKLTREELEQLSRKYIQAIYK--YLGSELDIPAPDVNTDSQTMA 158
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIG 273
WF D Y K G + + TGKP+ LGGI R +TG GV T A+ N IG
Sbjct: 159 WFLDEYIKITGKVD---FAVFTGKPVELGGIGVRLYSTGLGVATIAKEAANKF-----IG 210
Query: 274 LEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYK 333
+E I+QGFGNVG++A ++ AK + + + ++ +KG ++ K + +
Sbjct: 211 ---GVEEARVIIQGFGNVGYYAGKFLSEMGAKIVGVSDSKGGVINEKGIDVG-KAIEIKE 266
Query: 334 ITKGTIKGYP-GTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTP 392
T G++ YP G K +++ DIL+PAA+E VI K NA KV+AK+IVE ANGPLT
Sbjct: 267 KT-GSVINYPEGRKVTNEELLISDCDILIPAALENVINKFNAPKVKAKLIVEGANGPLTA 325
Query: 393 AAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSID 452
A ++ ++ + ++PDI ANAGGV SY EW N +G + D+E L++ ++
Sbjct: 326 DADEIMRQRGIAVVPDILANAGGVVGSYVEWANN----KMGEII--SDEEAKKLIVDRMN 379
Query: 453 ---TSLSDTFNKK-----IRIQKSAMYEDRISNA 478
+L D KK +R A+ DR+ A
Sbjct: 380 NAFNTLYDYHQKKLEDHDLRTAAMALAVDRVVRA 413
>sp|P39475|DHE4_SULSH NADP-specific glutamate dehydrogenase (Fragment) OS=Sulfolobus
shibatae GN=gdhA PE=3 SV=1
Length = 390
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/336 (40%), Positives = 200/336 (59%), Gaps = 16/336 (4%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
+++++ R G+ + +R H + P KGG+RY+ +V DEV AL+ +MT+KNS
Sbjct: 13 VIQVKIQIRGSDGKLKTFMGWRSQHNSALGPYKGGVRYSPNVTQDEVIALSMIMTWKNSL 72
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
+P+GG KGGIR+DP K +ELE ++RK+ ++LI NY+G +D+PAPD NT+ + M+
Sbjct: 73 LLLPYGGGKGGIRVDPKKLTLKELEDLSRKY-VQLIH-NYLGSDVDIPAPDINTNPQTMA 130
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIG 273
WF D Y K G + + TGKP LGGI R +TG GV T A N +++ I
Sbjct: 131 WFLDEYIKITGEVD---FAVFTGKPSELGGIGVRLYSTGLGVATIAREAAN--KFIGGI- 184
Query: 274 LEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYK 333
E I+QGFGNVG A++ AK + + + ++ D G ++N K L +
Sbjct: 185 -----EGSRVIIQGFGNVGSFTAKFLNEMGAKIIGVSDIGGGVISDDGIDVN-KALEVVQ 238
Query: 334 ITKGTIKGYP-GTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTP 392
T G++ YP G K +++ DIL+PAA+E VI K NA KV+AK+IVE ANGPL
Sbjct: 239 ST-GSVVNYPEGKKVTNEELLTSDCDILIPAAVENVINKFNAPKVKAKLIVEGANGPLAA 297
Query: 393 AAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428
A ++ ++ +++IPDI ANAGGV SY EW N S
Sbjct: 298 DADEIIKQRGIVVIPDILANAGGVVGSYVEWANNKS 333
>sp|P52596|DHE3_VITVI Glutamate dehydrogenase OS=Vitis vinifera GN=GDH PE=2 SV=1
Length = 411
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/334 (40%), Positives = 195/334 (58%), Gaps = 17/334 (5%)
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
++++ +D G +R H + P KGGIRY +V+PDEV ALA LMT+K +
Sbjct: 35 IKVECTIPKDDGSLATYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVV 94
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
++P+GGAKGGI P + ELER+TR F ++ + +G DVPAPD T+A+ M+W
Sbjct: 95 DIPYGGAKGGIGCTPKDLSMSELERLTRVFTQKI--HDLIGTHTDVPAPDMGTNAQTMAW 152
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D Y+K G ++ +VTGKP+ LGG GRE+ATGRGV A E L+
Sbjct: 153 ILDEYSKFHG----HSPAVVTGKPIALGGSLGREAATGRGVVFATEALLAQHG------- 201
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
++ T+++QGFGNVG AR K +A+ + A+ G +I DL +K
Sbjct: 202 -KSIKGLTFVIQGFGNVGSWVARLIGERGGKIIAVSDVTGAVKNQNGLDI--VDLLRHKE 258
Query: 335 TKGTIKGYPGTKSA-PTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
G + + G P +++ + D+L+P A+ V+ K NA V+AK I+EAAN P P
Sbjct: 259 ETGCLTNFSGGDHMDPNELLTHECDVLIPCALGGVLNKENAADVKAKFIIEAANHPTDPE 318
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNI 427
A +L KK +I+PDI+ANAGGVTVSYFEW++NI
Sbjct: 319 ADEILSKKGGVILPDIYANAGGVTVSYFEWVQNI 352
>sp|O04937|DHEA_NICPL Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia GN=GDHA PE=2
SV=1
Length = 411
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 221/393 (56%), Gaps = 31/393 (7%)
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
++++ +D G +R H + P KGGIRY +V+ DEV ALA LMT+K + +
Sbjct: 35 IKVECTIPKDDGTLVSYVGFRVQHDNARGPMKGGIRYHPEVDLDEVNALAQLMTWKTAVA 94
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
++P+GGAKGGI P + ELER+TR F ++ + +G DVPAPD T+A+ M+W
Sbjct: 95 DIPYGGAKGGIGCKPKDLSKSELERLTRVFTQKI--HDLIGINTDVPAPDMGTNAQTMAW 152
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGL 274
D Y+K G ++ +VTGKP+ LGG GRE+ATGRGV A E L+ EY I
Sbjct: 153 ILDEYSKFHG----HSPAIVTGKPIDLGGSLGREAATGRGVVYATEALL--AEYGKNI-- 204
Query: 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334
++ T+ +QGFGNVG AA+ K +A+ + A+ G +I L +K
Sbjct: 205 ----KDLTFAIQGFGNVGAWAAKLIHERGGKVIAVSDITGAVKNPNGLDI--PALLNHKE 258
Query: 335 TKGTIKGYPGTKSAPTD-IMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPA 393
G + + G +D ++ + D+L+P A+ V+ + NAD V+AK I+EAAN P P
Sbjct: 259 ATGKLIDFSGGDVMNSDEVLTHECDVLIPCALGGVLNRENADNVKAKFIIEAANHPTDPE 318
Query: 394 AHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDT 453
A +L KK ++I+PDI+ANAGGVTVSYFEW++NI F +D+E + L T
Sbjct: 319 ADEILCKKGIVILPDIYANAGGVTVSYFEWVQNIQ-------GFMWDEEKVNRELRKYMT 371
Query: 454 -------SLSDTFNKKIRIQKSAMYEDRISNAT 479
++ + N +R+ + +R++ AT
Sbjct: 372 KAFHNLKNMCQSHNCSLRMGAFTLGVNRVARAT 404
>sp|Q9HSM4|DHE42_HALSA NADP-specific glutamate dehydrogenase B OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=gdhB PE=3
SV=1
Length = 429
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 201/352 (57%), Gaps = 17/352 (4%)
Query: 76 DIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDV 135
DIA +G+I + + + ++++ P RD G + YR H + P KGG+RY V
Sbjct: 36 DIA---DGVIERLTHPTRVVQVSVPVERDDGTVTVYDGYRAQHDDVRGPYKGGLRYHPGV 92
Query: 136 NPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVG 195
+ +E L+ MT+K + ++PFGGAKGG+ +DP + E ER+TR+FA EL ++ VG
Sbjct: 93 SAEECVGLSMWMTWKCAVMDLPFGGAKGGVVVDPKTLSADEHERLTRRFAAEL--RDEVG 150
Query: 196 PGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGV 255
P D+PAPD T A+ M+WF DAY+ G T G+VTGKP GG GR A GR V
Sbjct: 151 PSQDIPAPDMGTDAQTMAWFMDAYSMQQGET---VPGVVTGKPPVAGGSHGRAEAPGRSV 207
Query: 256 FTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTA 315
A +N + +++ T VQG+G+VG +AA A+ +A+ + +
Sbjct: 208 AIATREAINYYDI--------PIDDATVAVQGYGSVGANAALLLDDWGARVVAVSDVNGG 259
Query: 316 IVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNAD 375
++ G + + H + P T + + D VD+++PAA+ VI +NAD
Sbjct: 260 VLDTDGLDTHAIPSHGNQPAAVMRHDAPNTLTNEELLELD-VDVVIPAAVGNVITAANAD 318
Query: 376 KVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNI 427
++QA I+VE ANGP T AA +L ++ V +IPDI ANAGGVTVSYFEWL++I
Sbjct: 319 RIQADIVVEGANGPTTSAADRILEERAVPVIPDILANAGGVTVSYFEWLQDI 370
>sp|P80319|DHE3_PYRFU Glutamate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=gdhA PE=1 SV=2
Length = 420
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 200/341 (58%), Gaps = 22/341 (6%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
++E+ P D G ++ +R H + PTKGGIR+ + VKALAA MT+K +
Sbjct: 37 IVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAV 96
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
++P+GG KGGI +DP K ++RE ER+ R + + + + P D+PAPD T+ + M+
Sbjct: 97 MDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIY--DVISPYEDIPAPDVYTNPQIMA 154
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRG----VFTAAEILVNNEEYM 269
W D Y +T+ A G++TGKPL +GG GR AT RG + AA++L
Sbjct: 155 WMMDEY-ETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVL------- 206
Query: 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKD 328
G + ++ KT +QG+GN G++ A+ K +A+ + I G +N +
Sbjct: 207 ---GWD-TLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDG--LNADE 260
Query: 329 LHTYKITKGTIKGYPGTKSAPTDIMFD-KVDILVPAAIEKVIRKSNADKVQAKIIVEAAN 387
+ +K G++K +PG + + + + +VD+L PAAIE+VI K NAD ++AKI+ E AN
Sbjct: 261 VLKWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVAN 320
Query: 388 GPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428
GP+TP A +L +K +L IPD NAGGVTVSYFEW++NI+
Sbjct: 321 GPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNIT 361
>sp|Q47950|DHE3_PYRAB Glutamate dehydrogenase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=gdhA PE=3 SV=2
Length = 420
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 212/369 (57%), Gaps = 24/369 (6%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
++E+ P D G ++ +R + + PTKGGIR+ + VKALAA MT+K +
Sbjct: 37 IVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAV 96
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
++P+GG KGGI +DP K ++RE ER+ R + + + + P D+PAPD T+ + M+
Sbjct: 97 MDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIY--DVISPYEDIPAPDVYTNPQIMA 154
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRG----VFTAAEILVNNEEYM 269
W D Y +T+ A G++TGKPL +GG GR AT RG + AA++L ++
Sbjct: 155 WMMDEY-ETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVLGWDD--- 210
Query: 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKD 328
++ KT +QG+GN G++ A+ K +A+ + I G +N +
Sbjct: 211 --------LKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDG--LNADE 260
Query: 329 LHTYKITKGTIKGYPGTKSAPTDIMFD-KVDILVPAAIEKVIRKSNADKVQAKIIVEAAN 387
+ +K G++K +PG + + + + +VD+L PAAIE+VI K NAD ++AKI+ E AN
Sbjct: 261 VLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVAN 320
Query: 388 GPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS--HSSLGRMSFGYDKEISD 445
GP+TP A +L +K +L IPD NAGGVTVSYFEW++NI+ + +L + DK+++
Sbjct: 321 GPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTLEEVREKLDKKMTK 380
Query: 446 LLLSSIDTS 454
+T+
Sbjct: 381 AFYDVYNTA 389
>sp|Q53199|DHE3_RHISN Probable glutamate dehydrogenase OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01340 PE=3 SV=1
Length = 443
Score = 238 bits (608), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 226/413 (54%), Gaps = 26/413 (6%)
Query: 121 HKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERI 180
H P KG IRYA + + +EV+ALAALMT K S +VPFGG+KG ++IDP + +ELE I
Sbjct: 45 HCEPVKGDIRYASNADAEEVEALAALMTLKCSLVDVPFGGSKGALKIDPRGWTPQELEHI 104
Query: 181 TRKFALEL------IKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMV 234
TR+F E+ ++ VG D T REM+W D + + + + + V
Sbjct: 105 TRRFTQEMNKRPDRARRQCVGS-------DIGTGEREMAWMMDEFRRANPTDVVTSGACV 157
Query: 235 TGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFH 294
TGKPL GGI GR +TGRGV A + + + G ++ + ++QGFGNVG+H
Sbjct: 158 TGKPLSKGGIAGRAESTGRGVQFAIQSSLRDTRTPGLDGRRN-LKGASTVIQGFGNVGYH 216
Query: 295 AARYF-RRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDI- 352
AAR+ A+ + E D + +G I + L ++I G+I G+ G KS D+
Sbjct: 217 AARFLSEEDDARVTVLAERDGYVANPEGLSI--EALKQHQIRTGSILGFDGAKSIAGDMC 274
Query: 353 -MFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFA 411
+ D+L+PAA+E I NA++++A ++VEAANGP+T A +L + V I+PD++
Sbjct: 275 GVEQPCDVLIPAAMENAIHAENAERMKAHLVVEAANGPVTFEADEILRSRGVTILPDLYV 334
Query: 412 NAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMY 471
NAGGV VSYFE +KN++H G M ++ + +I T+L K+ + M
Sbjct: 335 NAGGVVVSYFERVKNLTHIPFGLM----ERRRRERGNHTIATALERMTGKE---SPADMR 387
Query: 472 EDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAAYCSALFKI 524
++ + E D+V+S L M+ I + E+ D R AAY +++ ++
Sbjct: 388 DEFLEGGAEIDLVRSGLEDVMRSTWTRIADLMEQQPELGDYRTAAYVASIRQV 440
>sp|P0CL72|DHE3_PYRHR Glutamate dehydrogenase OS=Pyrococcus horikoshii GN=gdhA PE=3 SV=1
Length = 420
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 199/341 (58%), Gaps = 22/341 (6%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
++E+ P D G ++ +R + + PTKGGIR+ + VKALAA MT+K +
Sbjct: 37 IVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAV 96
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
++P+GG KGGI +DP K ++RE ER+ R + + + + P D+PAPD T+ + M+
Sbjct: 97 MDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAVY--DIISPYEDIPAPDVYTNPQIMA 154
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRG----VFTAAEILVNNEEYM 269
W D Y +T+ A G++TGKPL +GG GR AT RG + AA++L
Sbjct: 155 WMMDEY-ETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVL------- 206
Query: 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKD 328
G + ++ KT +QG+GN G++ A+ K +A+ + I G +N +
Sbjct: 207 ---GWD-GLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDG--LNADE 260
Query: 329 LHTYKITKGTIKGYPGTKSAPTDIMFD-KVDILVPAAIEKVIRKSNADKVQAKIIVEAAN 387
+ +K G++K +PG + + + + VD+L PAAIE+VI K NAD ++AKI+ E AN
Sbjct: 261 VLKWKREHGSVKDFPGATNISNEELLELDVDVLAPAAIEEVITKKNADNIKAKIVAEVAN 320
Query: 388 GPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428
GP+TP A +L +K +L IPD NAGGVTVSYFEW++NI+
Sbjct: 321 GPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNIT 361
>sp|P0CL73|DHE3_PYRHO Glutamate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=gdhA PE=3 SV=1
Length = 420
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 199/341 (58%), Gaps = 22/341 (6%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
++E+ P D G ++ +R + + PTKGGIR+ + VKALAA MT+K +
Sbjct: 37 IVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAV 96
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
++P+GG KGGI +DP K ++RE ER+ R + + + + P D+PAPD T+ + M+
Sbjct: 97 MDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAVY--DIISPYEDIPAPDVYTNPQIMA 154
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRG----VFTAAEILVNNEEYM 269
W D Y +T+ A G++TGKPL +GG GR AT RG + AA++L
Sbjct: 155 WMMDEY-ETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVL------- 206
Query: 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKD 328
G + ++ KT +QG+GN G++ A+ K +A+ + I G +N +
Sbjct: 207 ---GWD-GLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDG--LNADE 260
Query: 329 LHTYKITKGTIKGYPGTKSAPTDIMFD-KVDILVPAAIEKVIRKSNADKVQAKIIVEAAN 387
+ +K G++K +PG + + + + VD+L PAAIE+VI K NAD ++AKI+ E AN
Sbjct: 261 VLKWKREHGSVKDFPGATNISNEELLELDVDVLAPAAIEEVITKKNADNIKAKIVAEVAN 320
Query: 388 GPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428
GP+TP A +L +K +L IPD NAGGVTVSYFEW++NI+
Sbjct: 321 GPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNIT 361
>sp|Q47951|DHE3_PYREN Glutamate dehydrogenase OS=Pyrococcus endeavori GN=gdhA PE=1 SV=1
Length = 420
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 207/365 (56%), Gaps = 16/365 (4%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
++E+ P D G ++ +R + + PTKGGIR+ + VKALAA MT+K +
Sbjct: 37 IVEVTIPVEMDDGTVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAV 96
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
++P+GG KGGI +DP K ++RE ER+ R + + + + P D+PAPD T+ + M+
Sbjct: 97 MDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIY--DVISPYEDIPAPDVYTNPQIMA 154
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIG 273
W D Y + + A G++TGKPL +GG GR AT RG A + + G
Sbjct: 155 WMMDEY-EAISRRKTPAFGIITGKPLSIGGSLGRNEATARG----ASYTIREARKVLGWG 209
Query: 274 LEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKDLHTY 332
++ KT +QG+GN G++ A+ K +A+ + I G +N ++ +
Sbjct: 210 ---DLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDG--LNADEVLKW 264
Query: 333 KITKGTIKGYPGTKSAPTDIMFD-KVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLT 391
K G++K +PG + + + + +VD+L PAAIE+VI K NAD ++AKI+ E ANGP+T
Sbjct: 265 KQEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANGPVT 324
Query: 392 PAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS--HSSLGRMSFGYDKEISDLLLS 449
P A +L +K +L IPD NAGGVTVSYFEW++NI+ + +L + DK+++
Sbjct: 325 PEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTLEEVREKLDKKMTKAFYD 384
Query: 450 SIDTS 454
+T+
Sbjct: 385 VYNTA 389
>sp|P39633|DHE2_BACSU Catabolic NAD-specific glutamate dehydrogenase RocG OS=Bacillus
subtilis (strain 168) GN=rocG PE=1 SV=3
Length = 424
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 202/353 (57%), Gaps = 19/353 (5%)
Query: 78 ALRRNG----IIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYAL 133
ALR+ G + LM+ +L ++ P + D+G ++ YR H PTKGG+R+
Sbjct: 28 ALRKLGYPGDMYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGGVRFHP 87
Query: 134 DVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNY 193
+VN +EVKAL+ MT K +N+P+GG KGGI DP + ELER++R + +
Sbjct: 88 EVNEEEVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAI--SQI 145
Query: 194 VGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGR 253
VGP D+PAPD T+++ M+W D Y++ ++ G +TGKPL LGG +GRE+AT +
Sbjct: 146 VGPTKDIPAPDVYTNSQIMAWMMDEYSRL---REFDSPGFITGKPLVLGGSQGRETATAQ 202
Query: 254 GVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHD 313
GV + EE + + G++ ++N I+QGFGN G A++ AK + I + +
Sbjct: 203 GV------TICIEEAVKKKGIK--LQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDAN 254
Query: 314 TAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSN 373
+ G +I Y L + + G + +++ DILVPAAI I N
Sbjct: 255 GGLYNPDGLDIPY--LLDKRDSFGMVTNLFTDVITNEELLEKDCDILVPAAISNQITAKN 312
Query: 374 ADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
A +QA I+VEAANGP T A +L ++ VL++PDI A+AGGVTVSYFEW++N
Sbjct: 313 AHNIQASIVVEAANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEWVQN 365
>sp|Q56304|DHE3_THELI Glutamate dehydrogenase OS=Thermococcus litoralis GN=gdhA PE=1 SV=3
Length = 419
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 195/337 (57%), Gaps = 15/337 (4%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
++E+ P D G ++ +R + + PTKGGIR+ + VKALAA MT+K +
Sbjct: 37 IVEVSIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAV 96
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
++P+GG KGG+ +P + ++RE ER+ R + + + + P D+PAPD T+ + M+
Sbjct: 97 MDLPYGGGKGGVICNPKEMSDREKERLARGYVRAIY--DVISPYTDIPAPDVYTNPQIMA 154
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIG 273
W D Y +T+ + G++TGKP +GGI R AT RG E +G
Sbjct: 155 WMMDEY-ETISRRKDPSFGVITGKPPSVGGIVARMDATARGASYTVR------EAAKALG 207
Query: 274 LEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKDLHTY 332
++ ++ KT +QG+GN G++ A+ K +A+ + I G +N ++ +
Sbjct: 208 MD--LKGKTIAIQGYGNAGYYMAKIMSEEYGMKVVAVSDTKGGIYNPDG--LNADEVLAW 263
Query: 333 KITKGTIKGYPGTKSAPTDIMFD-KVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLT 391
K G++K +PG + + + + +VD+L P+AIE+VI K NAD ++AKI+ E ANGP T
Sbjct: 264 KKKTGSVKDFPGATNITNEELLELEVDVLAPSAIEEVITKKNADNIKAKIVAELANGPTT 323
Query: 392 PAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428
P A +L +K +LIIPD NAGGVTVSYFEW++NI+
Sbjct: 324 PEADEILYEKGILIIPDFLCNAGGVTVSYFEWVQNIT 360
>sp|Q7A1B9|DHE2_STAAW NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MW2) GN=gluD PE=3 SV=1
Length = 414
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 191/344 (55%), Gaps = 15/344 (4%)
Query: 83 GIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKA 142
G+ L++ +L+++ P R D G + YR H PTKGG+R+ DV+ +EVKA
Sbjct: 27 GMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKA 86
Query: 143 LAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPA 202
L+ MT K N+P+GG KGGI DP + + E+ER++R + + +VGP D+PA
Sbjct: 87 LSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAI--SQFVGPNKDIPA 144
Query: 203 PDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEIL 262
PD T+++ M+W D Y+ N+ G +TGKP+ LGG GR+ +T GV A E
Sbjct: 145 PDVFTNSQIMAWMMDEYSAL---DKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQA 201
Query: 263 VNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGT 322
+E ++QGFGN G A++ AK + I + A+ G
Sbjct: 202 AKRRNMQ--------IEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGL 253
Query: 323 EINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKII 382
+I+Y L + + GT+ + ++ DILVPAAI I + NA ++A I+
Sbjct: 254 DIDY--LLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIV 311
Query: 383 VEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
VEAANGP TP A +L ++ +L++PD+ A+AGGVTVSYFEW++N
Sbjct: 312 VEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQN 355
>sp|Q6GAW8|DHE2_STAAS NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MSSA476) GN=gluD PE=3 SV=1
Length = 414
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 191/344 (55%), Gaps = 15/344 (4%)
Query: 83 GIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKA 142
G+ L++ +L+++ P R D G + YR H PTKGG+R+ DV+ +EVKA
Sbjct: 27 GMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKA 86
Query: 143 LAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPA 202
L+ MT K N+P+GG KGGI DP + + E+ER++R + + +VGP D+PA
Sbjct: 87 LSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAI--SQFVGPNKDIPA 144
Query: 203 PDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEIL 262
PD T+++ M+W D Y+ N+ G +TGKP+ LGG GR+ +T GV A E
Sbjct: 145 PDVFTNSQIMAWMMDEYSAL---DKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQA 201
Query: 263 VNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGT 322
+E ++QGFGN G A++ AK + I + A+ G
Sbjct: 202 AKRRNMQ--------IEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGL 253
Query: 323 EINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKII 382
+I+Y L + + GT+ + ++ DILVPAAI I + NA ++A I+
Sbjct: 254 DIDY--LLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIV 311
Query: 383 VEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
VEAANGP TP A +L ++ +L++PD+ A+AGGVTVSYFEW++N
Sbjct: 312 VEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQN 355
>sp|Q6GID0|DHE2_STAAR NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MRSA252) GN=gluD PE=3 SV=1
Length = 414
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 191/344 (55%), Gaps = 15/344 (4%)
Query: 83 GIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKA 142
G+ L++ +L+++ P R D G + YR H PTKGG+R+ DV+ +EVKA
Sbjct: 27 GMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKA 86
Query: 143 LAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPA 202
L+ MT K N+P+GG KGGI DP + + E+ER++R + + +VGP D+PA
Sbjct: 87 LSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAI--SQFVGPNKDIPA 144
Query: 203 PDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEIL 262
PD T+++ M+W D Y+ N+ G +TGKP+ LGG GR+ +T GV A E
Sbjct: 145 PDVFTNSQIMAWMMDEYSAL---DKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQA 201
Query: 263 VNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGT 322
+E ++QGFGN G A++ AK + I + A+ G
Sbjct: 202 AKRRNMQ--------IEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGL 253
Query: 323 EINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKII 382
+I+Y L + + GT+ + ++ DILVPAAI I + NA ++A I+
Sbjct: 254 DIDY--LLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIV 311
Query: 383 VEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
VEAANGP TP A +L ++ +L++PD+ A+AGGVTVSYFEW++N
Sbjct: 312 VEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQN 355
>sp|Q7A6H8|DHE2_STAAN NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain N315) GN=gluD PE=1 SV=1
Length = 414
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 191/344 (55%), Gaps = 15/344 (4%)
Query: 83 GIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKA 142
G+ L++ +L+++ P R D G + YR H PTKGG+R+ DV+ +EVKA
Sbjct: 27 GMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKA 86
Query: 143 LAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPA 202
L+ MT K N+P+GG KGGI DP + + E+ER++R + + +VGP D+PA
Sbjct: 87 LSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAI--SQFVGPNKDIPA 144
Query: 203 PDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEIL 262
PD T+++ M+W D Y+ N+ G +TGKP+ LGG GR+ +T GV A E
Sbjct: 145 PDVFTNSQIMAWMMDEYSAL---DKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQA 201
Query: 263 VNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGT 322
+E ++QGFGN G A++ AK + I + A+ G
Sbjct: 202 AKRRNMQ--------IEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGL 253
Query: 323 EINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKII 382
+I+Y L + + GT+ + ++ DILVPAAI I + NA ++A I+
Sbjct: 254 DIDY--LLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIV 311
Query: 383 VEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
VEAANGP TP A +L ++ +L++PD+ A+AGGVTVSYFEW++N
Sbjct: 312 VEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQN 355
>sp|Q99VD0|DHE2_STAAM NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=gluD PE=1 SV=1
Length = 414
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 191/344 (55%), Gaps = 15/344 (4%)
Query: 83 GIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKA 142
G+ L++ +L+++ P R D G + YR H PTKGG+R+ DV+ +EVKA
Sbjct: 27 GMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKA 86
Query: 143 LAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPA 202
L+ MT K N+P+GG KGGI DP + + E+ER++R + + +VGP D+PA
Sbjct: 87 LSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAI--SQFVGPNKDIPA 144
Query: 203 PDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEIL 262
PD T+++ M+W D Y+ N+ G +TGKP+ LGG GR+ +T GV A E
Sbjct: 145 PDVFTNSQIMAWMMDEYSAL---DKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQA 201
Query: 263 VNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGT 322
+E ++QGFGN G A++ AK + I + A+ G
Sbjct: 202 AKRRNMQ--------IEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGL 253
Query: 323 EINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKII 382
+I+Y L + + GT+ + ++ DILVPAAI I + NA ++A I+
Sbjct: 254 DIDY--LLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIV 311
Query: 383 VEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
VEAANGP TP A +L ++ +L++PD+ A+AGGVTVSYFEW++N
Sbjct: 312 VEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQN 355
>sp|Q5HHC7|DHE2_STAAC NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain COL) GN=gluD PE=3 SV=1
Length = 414
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 191/344 (55%), Gaps = 15/344 (4%)
Query: 83 GIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKA 142
G+ L++ +L+++ P R D G + YR H PTKGG+R+ DV+ +EVKA
Sbjct: 27 GMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKA 86
Query: 143 LAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPA 202
L+ MT K N+P+GG KGGI DP + + E+ER++R + + +VGP D+PA
Sbjct: 87 LSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAI--SQFVGPNKDIPA 144
Query: 203 PDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEIL 262
PD T+++ M+W D Y+ N+ G +TGKP+ LGG GR+ +T GV A E
Sbjct: 145 PDVFTNSQIMAWMMDEYSAL---DKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQA 201
Query: 263 VNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGT 322
+E ++QGFGN G A++ AK + I + A+ G
Sbjct: 202 AKRRNMQ--------IEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGL 253
Query: 323 EINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKII 382
+I+Y L + + GT+ + ++ DILVPAAI I + NA ++A I+
Sbjct: 254 DIDY--LLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIV 311
Query: 383 VEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
VEAANGP TP A +L ++ +L++PD+ A+AGGVTVSYFEW++N
Sbjct: 312 VEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQN 355
>sp|P28997|DHE2_PEPAS NAD-specific glutamate dehydrogenase OS=Peptostreptococcus
asaccharolyticus PE=1 SV=1
Length = 421
Score = 228 bits (581), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 196/346 (56%), Gaps = 20/346 (5%)
Query: 87 LMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAAL 146
L++ ++EI P + D G ++ + +R H + P+KGG+R+ +VN DEVKAL+
Sbjct: 31 LLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMDEVKALSLW 90
Query: 147 MTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYN 206
MT+K +P+GG KGGI +DP++ + RELE+++R + L K Y+G ID+PAPD N
Sbjct: 91 MTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYK--YLGDRIDIPAPDVN 148
Query: 207 TSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNE 266
T+ + MSWF D Y K G +G TGKP+ GG GR ATG GV
Sbjct: 149 TNGQIMSWFVDEYVKLNGER--MDIGTFTGKPVAFGGSEGRNEATGFGVAVVV------R 200
Query: 267 EYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDT-----AIVPDKG 321
E G++ ME+ VQGFGNVG + R K AI E D A+ + G
Sbjct: 201 ESAKRFGIK--MEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENG 258
Query: 322 TEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDK-VDILVPAAIEKVIRKSNADKVQAK 380
I++K+L YK T+ G+PG + + + K DI+VPAA+E VI A + AK
Sbjct: 259 --IDFKELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAALENVITGERAKTINAK 316
Query: 381 IIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
++ EAANGP TP +L ++ + + PDI N+GGV VSY+EW++N
Sbjct: 317 LVCEAANGPTTPEGDKVLTERGINLTPDILTNSGGVLVSYYEWVQN 362
>sp|Q9YC65|DHE3_AERPE Glutamate dehydrogenase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=gdhA PE=3
SV=2
Length = 418
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 204/341 (59%), Gaps = 16/341 (4%)
Query: 87 LMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAAL 146
++ N +L+++ + D G + +R H + P KGG+RY +V +EV AL+
Sbjct: 30 VLANPDRVLQVRVTIKMDDGTVKTFLGWRSQHNSALGPYKGGVRYHPNVTMNEVIALSMW 89
Query: 147 MTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYN 206
MT+KNS + +P+GG KGG+R++P + RELE ++RK+ E I + VG D+PAPD
Sbjct: 90 MTWKNSLAGLPYGGGKGGVRVNPKILSPRELELLSRKY-FESIS-DIVGVDQDIPAPDVY 147
Query: 207 TSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNE 266
T + MSWF D Y + G+VTGKP+ LGG+ R +TG GV A V E
Sbjct: 148 TDPQVMSWFLDEYNRV---KRGQFFGVVTGKPVELGGLNARIVSTGYGV--AVSTRVAAE 202
Query: 267 EYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINY 326
+++ +E +T VQG+GNVG++AA++ AK +A+ + I +G I+
Sbjct: 203 KFLG------GLEGRTVAVQGYGNVGYYAAKFLAEMGAKIVAVSDSRGGIYDPEG--IDP 254
Query: 327 KDLHTYKITKGTIKGYP-GTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEA 385
++ K + GT+ Y G K + +I+ VDILVPAAIE+VI NAD+++AKII E
Sbjct: 255 EEALKVKRSTGTVANYQRGKKISTMEILELPVDILVPAAIEEVITDENADRIKAKIISEG 314
Query: 386 ANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
ANGP T AA +L+KK VL++PDI ANAGGV +S+ EW+ N
Sbjct: 315 ANGPTTTAAEKILVKKGVLVLPDILANAGGVIMSHIEWVNN 355
>sp|O74024|DHE3_THEPR Glutamate dehydrogenase OS=Thermococcus profundus GN=gdhA PE=1 SV=1
Length = 419
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 196/339 (57%), Gaps = 19/339 (5%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
++E+ P D G ++ +R H + PTKGGIR+ VKALA MT+K +
Sbjct: 37 IVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETLSTVKALATWMTWKVAV 96
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
++P+GG KGGI ++P + + RE ER+ R + + + +GP D+PAPD T+ + M
Sbjct: 97 VDLPYGGGKGGIIVNPKELSEREQERLARAYIRAVY--DVIGPWTDIPAPDVYTNPKIMG 154
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRG-VFTAAEILVNNEEYMCEI 272
W D Y +T+ A G++TGKPL +GG GR +AT +G +FT E +
Sbjct: 155 WMMDEY-ETIMRRKGPAFGVITGKPLSIGGSLGRGTATAQGAIFTI-------REAAKAL 206
Query: 273 GLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIV--PDKGTEINYKDLH 330
G++ ++ K VQG+GN G++ A+ + + V + PD ++ ++
Sbjct: 207 GID--LKGKKIAVQGYGNAGYYTAKLAKEQLGMTVVAVSDSRGGIYNPDG---LDPDEVL 261
Query: 331 TYKITKGTIKGYPGTKSAPTDIMFD-KVDILVPAAIEKVIRKSNADKVQAKIIVEAANGP 389
+K G++K +PG + + + + +VD+L PAAIE+VI + NAD ++AKI+ E ANGP
Sbjct: 262 KWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITEKNADNIKAKIVAEVANGP 321
Query: 390 LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428
+TP A +L +K +L IPD NAGGVTVSYFEW++NI+
Sbjct: 322 VTPEADDILREKGILQIPDFLCNAGGVTVSYFEWVQNIN 360
>sp|P50735|GUDB_BACSU Cryptic catabolic NAD-specific glutamate dehydrogenase GudB
OS=Bacillus subtilis (strain 168) GN=gudB PE=1 SV=2
Length = 427
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 195/343 (56%), Gaps = 18/343 (5%)
Query: 87 LMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAAL 146
L++ LL ++ P R D G ++ YR H PTKGGIR+ +V EVKA+ AL
Sbjct: 41 LLKEPMRLLTVKIPVRMDDGSVKIFTGYRAQHNDSVGPTKGGIRFHPNVTEKEVKAVKAL 100
Query: 147 ---MTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAP 203
M+ K ++P+GG KGGI DP + RELER++R + + VGP DVPAP
Sbjct: 101 SIWMSLKCGIIDLPYGGGKGGIVCDPRDMSFRELERLSRGYVRAI--SQIVGPTKDVPAP 158
Query: 204 DYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILV 263
D T+++ M+W D Y++ N+ G +TGKPL LGG GRESAT +GV +
Sbjct: 159 DVFTNSQIMAWMMDEYSRI---DEFNSPGFITGKPLVLGGSHGRESATAKGVTICIK--- 212
Query: 264 NNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTE 323
E + G++ ++ +VQGFGN G + A++ AK + I + + +G +
Sbjct: 213 ---EAAKKRGID--IKGARVVVQGFGNAGSYLAKFMHDAGAKVVGISDAYGGLYDPEGLD 267
Query: 324 INYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQAKIIV 383
I+Y L + + GT+ +++ DILVPAAIE I + NA ++AKI+V
Sbjct: 268 IDY--LLDRRDSFGTVTKLFNDTITNQELLELDCDILVPAAIENQITEENAHNIRAKIVV 325
Query: 384 EAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
EAANGP T +L +++L++PD+ A+AGGVTVSYFEW++N
Sbjct: 326 EAANGPTTLEGTKILSDRDILLVPDVLASAGGVTVSYFEWVQN 368
>sp|O59650|DHE3_PYRKO Glutamate dehydrogenase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=gdhA PE=1 SV=4
Length = 421
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 208/386 (53%), Gaps = 39/386 (10%)
Query: 52 FHRAVQNLIPEFDVSIRARKFTD-EDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYEL 110
F AVQ L RA +F D + AL ++ ++E+ P D G ++
Sbjct: 7 FEMAVQQLE-------RAAQFMDISEEALE------WLKRPMRIVEVSVPVEMDDGSVKV 53
Query: 111 IQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPS 170
+R H + PTKGGIR+ VKALA MT+K + ++P+GG KGGI +DP
Sbjct: 54 FTGFRVQHNWARGPTKGGIRWHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVDPK 113
Query: 171 KYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINA 230
K + RE ER+ R + + + +GP D+PAPD T+ + M+W D Y +T+ A
Sbjct: 114 KLSEREQERLARSYIRAVY--DVIGPWTDIPAPDVYTNPKIMAWMMDEY-ETIMRRKGPA 170
Query: 231 LGMVTGKPLFLGGIRGRESATGRGV-FTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFG 289
G++TGKP +GGI R AT RG FT E +G + ++ KT +QG+G
Sbjct: 171 FGVITGKPPGVGGIVARMDATARGAAFTI-------REAAKALGWDD-LKGKTIAIQGYG 222
Query: 290 NVGFHAARYFRRGRA-KCLAIVEHDTAI-----VPDKGTEINYKDLHTYKITKGTIKGYP 343
N G++ + K +A+ + I +P + +K H G++K P
Sbjct: 223 NAGYYLHKIMSEEFGMKVVAVSDSKGGIYNPDGLPPADEVLKWKKEH------GSVKDMP 276
Query: 344 GTKSAPTDIMFD-KVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKN 402
GT++ + + + +VDIL P+AIE VI K NAD V+AKI+ E ANGP+TP A +L +K
Sbjct: 277 GTQNITNEELLELEVDILAPSAIEGVITKENADNVKAKIVAEVANGPVTPEADEILHEKG 336
Query: 403 VLIIPDIFANAGGVTVSYFEWLKNIS 428
+L IPD NAGGVTVSYFEW++NI+
Sbjct: 337 ILQIPDFLCNAGGVTVSYFEWVQNIN 362
>sp|P54386|DHE4_SYNY3 NADP-specific glutamate dehydrogenase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=gdhA PE=3 SV=1
Length = 428
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 194/349 (55%), Gaps = 35/349 (10%)
Query: 95 LEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCS 154
L + P R D G ++ YR + + P KGG+RY +V DEV++LA MT+K +
Sbjct: 37 LSVSIPVRMDDGSLKIFPGYRVRYDDTRGPGKGGVRYHPNVTMDEVQSLAFWMTFKCALL 96
Query: 155 NVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSW 214
N+PFGGAKGGI ++P + + ELER++R + +E I +++GP ID+ APD T+ M W
Sbjct: 97 NLPFGGAKGGITLNPKELSRAELERLSRGY-IEAIA-DFIGPDIDILAPDVYTNEMMMGW 154
Query: 215 FYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAE-ILVNNEEYMCEIG 273
D Y ++ I+ +VTGKP+ +GG +GR +ATG G F + +L ++Y
Sbjct: 155 MMDQY--SIIRRKISP-AVVTGKPVTMGGSQGRNTATGTGAFYIMQGMLPKFDQYP---- 207
Query: 274 LEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEI----NYKDL 329
EN T VQGFGN G A + K +AI + I ++G +I +YK
Sbjct: 208 -----ENTTVAVQGFGNAGMVVAECLYQDGYKVVAISDSQGGIYNEQGIDIPAVIDYKQR 262
Query: 330 HTYKITKGTIKGY----------PGTKSAPTDIMFDKVDILVPAAIEKVIRKSNADKVQA 379
H T+ G + + +++ VD+L+PAA+E I + NAD+V+A
Sbjct: 263 HR------TLAGMYCDQAICDLGENQQISNAELLALDVDVLIPAALENQITRDNADQVRA 316
Query: 380 KIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428
+ I E ANGP T AA +L K + + PDI NAGGVTVSYFEW++N S
Sbjct: 317 RYIFEVANGPTTTAADDILASKGIYVFPDILVNAGGVTVSYFEWVQNRS 365
>sp|P27346|DHE2_CLODI NAD-specific glutamate dehydrogenase OS=Clostridium difficile
GN=gluD PE=3 SV=1
Length = 421
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 198/347 (57%), Gaps = 21/347 (6%)
Query: 87 LMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAAL 146
L++ ++E+ P + D G + + +R H PTKGGIR+ +V+ DEVKAL+
Sbjct: 32 LLKEPMRVIEVSIPVKMDDGSIKTFKGFRSQHNDAVGPTKGGIRFHQNVSRDEVKALSIW 91
Query: 147 MTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYN 206
MT+K S + +P+GG KGGI +DPS + ELER++R + + K +G +DVPAPD N
Sbjct: 92 MTFKCSVTGIPYGGGKGGIIVDPSTLSQGELERLSRGYIDGIYK--LIGEKVDVPAPDVN 149
Query: 207 TSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNE 266
T+ + MSW D Y K G ++I G++TGKP+ GG GR +ATG GV A
Sbjct: 150 TNGQIMSWMVDEYNKLTGQSSI---GVITGKPVEFGGSLGRTAATGFGVAVTAR------ 200
Query: 267 EYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH-----DTAIVPDKG 321
E ++G++ M+ VQG GNVG + + +A+ E AI + G
Sbjct: 201 EAAAKLGID--MKKAKIAVQGIGNVGSYTVLNCEKLGGTVVAMAEWCKSEGSYAIYNENG 258
Query: 322 TEINYKDLHTYKITKGTIKGYPGTKSAPTDIMF-DKVDILVPAAIEKVIRKSNADKVQAK 380
++ + + Y G + +PG K + + VDI++PAA+E I K A+ ++AK
Sbjct: 259 --LDGQAMLDYMKEHGNLLNFPGAKRISLEEFWASDVDIVIPAALENSITKEVAESIKAK 316
Query: 381 IIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNI 427
++ EAANGP TP A + ++ +++ PDI NAGGVTVSYFEW++N+
Sbjct: 317 LVCEAANGPTTPEADEVFAERGIVLTPDILTNAGGVTVSYFEWVQNL 363
>sp|P24295|DHE2_CLOSY NAD-specific glutamate dehydrogenase OS=Clostridium symbiosum
GN=gdh PE=1 SV=4
Length = 450
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 175/364 (48%), Gaps = 31/364 (8%)
Query: 75 EDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALD 134
E++AL +I ++E + P+ D+G+ + YR P KGG+R+A
Sbjct: 44 EEVALLERMVIP-----ERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYKGGLRFAPS 98
Query: 135 VNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYV 194
VN +K L +K+S + +P GGAKGG DP+ ++RE+ R + F EL + ++
Sbjct: 99 VNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYR--HI 156
Query: 195 GPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRG 254
GP IDVPA D ARE+ + Y Y K +G G++TGK GG R ATG G
Sbjct: 157 GPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFY---NGVLTGKARSFGGSLVRPEATGYG 213
Query: 255 VFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDT 314
E ++ +E + KT + GFGNV + AA+ AK + + D
Sbjct: 214 SVYYVEAVMKHE--------NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDG 265
Query: 315 AIVPDKGT----EINYKDLHTYKITKGTIKGYP---GTKSAPTDIMF-DKVDILVPAAIE 366
I +G +INY L + ++ Y G + P + + KVDI++P A +
Sbjct: 266 YIYDPEGITTEEKINYM-LEMRASGRNKVQDYADKFGVQFFPGEKPWGQKVDIIMPCATQ 324
Query: 367 KVIRKSNADKVQA---KIIVEAANGPLTPAAHAMLLKK-NVLIIPDIFANAGGVTVSYFE 422
+ A K+ A K +E AN P T A L+++ N+++ P NAGGV VS FE
Sbjct: 325 NDVDLEQAKKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFE 384
Query: 423 WLKN 426
+N
Sbjct: 385 MSQN 388
>sp|P95544|DHE4_PRERU NAD(P)-specific glutamate dehydrogenase OS=Prevotella ruminicola
GN=gdhA PE=1 SV=1
Length = 444
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 153/351 (43%), Gaps = 25/351 (7%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
+L+ + + D+G + YR H P KGG+R+ VN +K LA T+KNS
Sbjct: 56 ILQFRVSWVDDNGNVQTNLGYRVQHNNAIGPYKGGLRFHKSVNASILKFLAFEQTFKNSL 115
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
+ +P GGAKGG DP ++ E+ R + F EL + +GP DVPA D RE+
Sbjct: 116 TTLPMGGAKGGSDFDPHGKSDMEVMRFCQAFMNELYR--LIGPDEDVPAGDIGVGGREVG 173
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRG-VFTAAEILVNNEEYMCEI 272
+ + Y K G++TGK L GG R ATG G V+ ++L E
Sbjct: 174 YMFGQYKKLTHQFQ----GILTGKGLEFGGSLIRPEATGYGNVYFLEDMLKTRGE----- 224
Query: 273 GLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKD--LH 330
+E KT +V G GNV + + AK + + + I G + +
Sbjct: 225 ----SLEGKTVLVSGSGNVAQYTIEKLLQLGAKPVTCSDSNGYIYDPDGIDAEKLAFIME 280
Query: 331 TYKITKGTIKGYP---GTKSAPTDIMF-DKVDILVPAAIEKVIRKSNADKVQAK---IIV 383
+ +G IK Y G K + +K DI P A + I ++ A + A +
Sbjct: 281 LKNVKRGRIKEYAEKYGVKYVENARPWGEKADIATPCATQDEINEAEAKTLIANGVFAVS 340
Query: 384 EAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGR 434
E AN P PAA + +L P +NAGGV S E +N S R
Sbjct: 341 EGANMPTEPAAIKVFQDAKILYCPGKASNAGGVATSGLEMSQNSERLSWTR 391
>sp|P94598|DHE3_BACTN Glutamate dehydrogenase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=gdhA PE=3 SV=2
Length = 444
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 149/343 (43%), Gaps = 25/343 (7%)
Query: 94 LLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSC 153
+ + + + D G + YR H P KGGIR+ VN +K LA T+KNS
Sbjct: 56 VFQFRVTWMDDKGNIQTNMGYRVQHNNAIGPYKGGIRFHASVNLSILKFLAFEQTFKNSL 115
Query: 154 SNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMS 213
+ +P GG KGG P +N E+ R + F LEL + ++GP DVPA D RE+
Sbjct: 116 TTLPMGGGKGGSDFSPRGKSNAEVMRFVQAFMLELWR--HIGPETDVPAGDIGVGGREVG 173
Query: 214 WFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRG-VFTAAEILVNNEEYMCEI 272
+ + Y K G TGK GG R ATG G ++ E+L
Sbjct: 174 FMFGMYKKLAHEFT----GTFTGKGREFGGSLIRPEATGYGNIYFLMEMLKTK------- 222
Query: 273 GLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKD--LH 330
G + ++ K +V G GNV + K + + D I G + D +
Sbjct: 223 GTD--LKGKVCLVSGSGNVAQYTIEKVIELGGKVVTCSDSDGYIYDPDGIDREKLDYIME 280
Query: 331 TYKITKGTIKGYP---GTKSAPTDIMF-DKVDILVPAAIEKVIRKSNADKVQAK---IIV 383
+ +G I+ Y G K + +K DI +P+A + + +A ++ A +
Sbjct: 281 LKNLYRGRIREYAEKYGCKYVEGAKPWGEKCDIALPSATQNELNGDHARQLVANGCIAVS 340
Query: 384 EAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426
E AN P TP A + +L P ANAGGV+VS E +N
Sbjct: 341 EGANMPSTPEAVRVFQDAKILYAPGKAANAGGVSVSGLEMTQN 383
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,892,304
Number of Sequences: 539616
Number of extensions: 9030162
Number of successful extensions: 43055
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 42536
Number of HSP's gapped (non-prelim): 209
length of query: 535
length of database: 191,569,459
effective HSP length: 122
effective length of query: 413
effective length of database: 125,736,307
effective search space: 51929094791
effective search space used: 51929094791
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)