Query psy1913
Match_columns 535
No_of_seqs 284 out of 1797
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 19:29:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mw9_A GDH 1, glutamate dehydr 100.0 8E-146 3E-150 1170.8 50.6 495 37-534 2-499 (501)
2 3k92_A NAD-GDH, NAD-specific g 100.0 2E-124 7E-129 993.6 39.8 410 41-534 14-424 (424)
3 3aog_A Glutamate dehydrogenase 100.0 3E-122 9E-127 981.9 44.4 426 24-534 13-439 (440)
4 3r3j_A Glutamate dehydrogenase 100.0 3E-121 1E-125 973.5 37.7 416 39-533 28-455 (456)
5 3aoe_E Glutamate dehydrogenase 100.0 3E-119 9E-124 955.2 42.0 410 38-534 8-418 (419)
6 2bma_A Glutamate dehydrogenase 100.0 4E-119 1E-123 961.6 38.8 417 39-534 41-470 (470)
7 2yfq_A Padgh, NAD-GDH, NAD-spe 100.0 1E-118 3E-123 952.1 37.9 411 42-534 5-421 (421)
8 4fcc_A Glutamate dehydrogenase 100.0 2E-117 5E-122 945.4 39.4 417 40-534 23-450 (450)
9 2tmg_A Protein (glutamate dehy 100.0 7E-117 3E-121 935.9 43.9 411 41-534 2-414 (415)
10 1v9l_A Glutamate dehydrogenase 100.0 2E-117 6E-122 941.6 35.6 411 41-534 3-421 (421)
11 1bgv_A Glutamate dehydrogenase 100.0 1E-115 4E-120 933.2 36.8 420 39-534 16-448 (449)
12 1gtm_A Glutamate dehydrogenase 100.0 9E-104 3E-108 838.4 41.7 412 41-534 2-417 (419)
13 1c1d_A L-phenylalanine dehydro 100.0 1.1E-85 3.7E-90 686.1 28.8 335 90-531 9-352 (355)
14 1leh_A Leucine dehydrogenase; 100.0 1.1E-82 3.7E-87 666.0 26.9 336 91-534 12-353 (364)
15 3ing_A Homoserine dehydrogenas 97.8 5.6E-05 1.9E-09 77.7 10.0 83 278-367 2-93 (325)
16 3n58_A Adenosylhomocysteinase; 97.6 0.00015 5E-09 77.8 9.3 97 270-390 239-338 (464)
17 3h9u_A Adenosylhomocysteinase; 97.5 0.00037 1.3E-08 74.4 11.4 96 271-390 204-302 (436)
18 3gvp_A Adenosylhomocysteinase 97.5 0.00032 1.1E-08 74.9 10.7 92 277-390 217-311 (435)
19 2d5c_A AROE, shikimate 5-dehyd 97.4 0.0013 4.3E-08 64.6 12.8 125 272-423 111-243 (263)
20 3g0o_A 3-hydroxyisobutyrate de 97.4 0.0031 1.1E-07 63.0 15.7 192 280-517 7-212 (303)
21 2o4c_A Erythronate-4-phosphate 97.4 0.0014 4.8E-08 68.8 13.5 156 199-406 61-229 (380)
22 3do5_A HOM, homoserine dehydro 97.4 0.00073 2.5E-08 69.5 10.9 124 281-417 3-147 (327)
23 2h78_A Hibadh, 3-hydroxyisobut 97.4 0.0023 7.9E-08 63.5 14.1 188 281-514 4-203 (302)
24 3d4o_A Dipicolinate synthase s 97.4 0.00069 2.3E-08 67.8 10.2 107 277-406 152-263 (293)
25 2rir_A Dipicolinate synthase, 97.3 0.00041 1.4E-08 69.6 7.9 117 277-416 154-277 (300)
26 3pef_A 6-phosphogluconate dehy 97.2 0.0027 9.3E-08 62.7 11.9 190 281-516 2-203 (287)
27 2hk9_A Shikimate dehydrogenase 97.2 0.0019 6.4E-08 64.1 10.7 140 250-424 111-257 (275)
28 3doj_A AT3G25530, dehydrogenas 97.1 0.0037 1.3E-07 62.8 12.9 194 279-518 20-225 (310)
29 3qha_A Putative oxidoreductase 97.1 0.0011 3.8E-08 66.2 8.9 189 280-515 15-212 (296)
30 4e21_A 6-phosphogluconate dehy 97.1 0.00071 2.4E-08 70.2 7.4 114 278-416 20-145 (358)
31 3jtm_A Formate dehydrogenase, 97.1 0.0013 4.3E-08 68.4 9.2 106 277-404 161-276 (351)
32 2zyd_A 6-phosphogluconate dehy 97.1 0.0048 1.6E-07 66.4 13.7 197 278-516 13-228 (480)
33 2d0i_A Dehydrogenase; structur 97.0 0.00041 1.4E-08 71.2 4.6 105 277-404 143-255 (333)
34 4e5n_A Thermostable phosphite 97.0 0.001 3.4E-08 68.4 7.4 106 277-404 142-256 (330)
35 3pdu_A 3-hydroxyisobutyrate de 97.0 0.0034 1.2E-07 62.0 10.8 190 281-518 2-205 (287)
36 2j6i_A Formate dehydrogenase; 97.0 0.0013 4.3E-08 68.5 7.8 168 199-404 87-277 (364)
37 3l6d_A Putative oxidoreductase 97.0 0.0012 4E-08 66.4 7.3 110 277-408 6-125 (306)
38 4gbj_A 6-phosphogluconate dehy 97.0 0.00071 2.4E-08 68.2 5.6 187 281-514 6-204 (297)
39 4gwg_A 6-phosphogluconate dehy 96.9 0.0043 1.5E-07 67.1 11.8 197 280-515 4-217 (484)
40 4dll_A 2-hydroxy-3-oxopropiona 96.9 0.0015 5E-08 66.2 7.6 108 278-407 29-147 (320)
41 1nyt_A Shikimate 5-dehydrogena 96.9 0.0096 3.3E-07 58.8 13.3 127 251-406 102-235 (271)
42 1vl6_A Malate oxidoreductase; 96.9 0.0051 1.7E-07 64.8 11.7 108 270-390 184-297 (388)
43 3obb_A Probable 3-hydroxyisobu 96.9 0.0017 6E-08 65.6 7.7 105 281-406 4-119 (300)
44 1gpj_A Glutamyl-tRNA reductase 96.8 0.0048 1.6E-07 64.7 11.0 108 278-409 165-289 (404)
45 3gg9_A D-3-phosphoglycerate de 96.8 0.0026 8.7E-08 66.1 8.5 105 277-404 157-271 (352)
46 1wwk_A Phosphoglycerate dehydr 96.8 0.0013 4.5E-08 66.7 5.8 105 277-404 139-252 (307)
47 1pgj_A 6PGDH, 6-PGDH, 6-phosph 96.8 0.011 3.6E-07 63.6 13.0 198 281-516 2-217 (478)
48 1mx3_A CTBP1, C-terminal bindi 96.7 0.0013 4.4E-08 68.2 5.6 105 277-404 165-279 (347)
49 3llv_A Exopolyphosphatase-rela 96.7 0.0014 4.7E-08 57.6 4.6 105 279-404 5-118 (141)
50 2w2k_A D-mandelate dehydrogena 96.7 0.0042 1.4E-07 64.1 8.8 107 276-404 159-276 (348)
51 3hg7_A D-isomer specific 2-hyd 96.7 0.0039 1.3E-07 64.0 8.4 103 277-403 137-249 (324)
52 1lss_A TRK system potassium up 96.6 0.0025 8.6E-08 54.9 6.0 106 279-403 3-116 (140)
53 2ekl_A D-3-phosphoglycerate de 96.6 0.0019 6.5E-08 65.7 5.8 106 276-404 138-252 (313)
54 2pi1_A D-lactate dehydrogenase 96.6 0.0016 5.3E-08 67.1 5.1 104 277-404 138-250 (334)
55 2g76_A 3-PGDH, D-3-phosphoglyc 96.6 0.0037 1.3E-07 64.4 7.8 105 277-404 162-275 (335)
56 2nac_A NAD-dependent formate d 96.6 0.006 2.1E-07 64.3 9.5 106 277-404 188-303 (393)
57 3d64_A Adenosylhomocysteinase; 96.6 0.0046 1.6E-07 67.0 8.7 109 268-400 267-380 (494)
58 3ond_A Adenosylhomocysteinase; 96.6 0.01 3.5E-07 64.2 11.3 95 270-388 257-354 (488)
59 1v8b_A Adenosylhomocysteinase; 96.5 0.0071 2.4E-07 65.3 9.8 99 268-390 247-348 (479)
60 4g2n_A D-isomer specific 2-hyd 96.5 0.0051 1.7E-07 63.7 8.3 104 277-404 170-283 (345)
61 3evt_A Phosphoglycerate dehydr 96.5 0.0033 1.1E-07 64.5 6.8 104 277-404 134-247 (324)
62 2cvz_A Dehydrogenase, 3-hydrox 96.5 0.031 1.1E-06 54.5 13.4 111 281-416 2-120 (289)
63 3c85_A Putative glutathione-re 96.5 0.0037 1.3E-07 57.3 6.3 111 277-405 36-155 (183)
64 3fwz_A Inner membrane protein 96.5 0.0045 1.5E-07 54.8 6.6 103 281-404 8-120 (140)
65 1a4i_A Methylenetetrahydrofola 96.5 0.0077 2.6E-07 61.4 8.9 96 247-390 144-241 (301)
66 4ezb_A Uncharacterized conserv 96.4 0.046 1.6E-06 55.2 14.6 188 281-512 25-223 (317)
67 3gvx_A Glycerate dehydrogenase 96.4 0.0038 1.3E-07 63.1 6.5 101 277-404 119-229 (290)
68 3oet_A Erythronate-4-phosphate 96.4 0.011 3.6E-07 62.2 10.0 159 269-461 110-283 (381)
69 2gcg_A Glyoxylate reductase/hy 96.4 0.0016 5.6E-08 66.5 3.6 106 277-404 152-266 (330)
70 1ygy_A PGDH, D-3-phosphoglycer 96.3 0.0051 1.8E-07 66.9 7.2 105 277-404 139-252 (529)
71 2egg_A AROE, shikimate 5-dehyd 96.3 0.026 8.9E-07 56.7 11.6 127 251-408 123-262 (297)
72 2c2x_A Methylenetetrahydrofola 96.3 0.0074 2.5E-07 61.0 7.4 95 247-389 137-235 (281)
73 3dtt_A NADP oxidoreductase; st 96.2 0.0026 8.9E-08 61.8 4.0 92 277-388 16-126 (245)
74 2iz1_A 6-phosphogluconate dehy 96.2 0.0053 1.8E-07 65.7 6.6 117 280-415 5-132 (474)
75 1gdh_A D-glycerate dehydrogena 96.2 0.0061 2.1E-07 62.2 6.7 105 277-404 143-258 (320)
76 2dbq_A Glyoxylate reductase; D 96.1 0.0049 1.7E-07 63.1 5.6 104 277-403 147-259 (334)
77 1xdw_A NAD+-dependent (R)-2-hy 96.1 0.0075 2.6E-07 61.8 6.9 103 277-404 143-254 (331)
78 2a9f_A Putative malic enzyme ( 96.1 0.013 4.4E-07 61.9 8.4 111 277-393 185-298 (398)
79 3p2o_A Bifunctional protein fo 96.1 0.012 4.2E-07 59.5 8.0 53 247-312 139-192 (285)
80 3ce6_A Adenosylhomocysteinase; 96.1 0.0065 2.2E-07 65.8 6.3 91 277-389 271-364 (494)
81 4a5o_A Bifunctional protein fo 96.0 0.0082 2.8E-07 60.8 6.5 50 247-308 140-190 (286)
82 2ahr_A Putative pyrroline carb 96.0 0.011 3.7E-07 57.2 7.1 102 281-405 4-108 (259)
83 3cky_A 2-hydroxymethyl glutara 96.0 0.0088 3E-07 59.0 6.4 104 281-406 5-120 (301)
84 1yqg_A Pyrroline-5-carboxylate 96.0 0.017 5.7E-07 55.8 8.2 96 281-399 1-101 (263)
85 3k5p_A D-3-phosphoglycerate de 95.9 0.016 5.3E-07 61.6 8.4 102 277-404 153-264 (416)
86 4dgs_A Dehydrogenase; structur 95.9 0.012 4.1E-07 60.8 7.2 101 277-404 168-278 (340)
87 1ebf_A Homoserine dehydrogenas 95.9 0.0087 3E-07 62.2 6.2 45 280-326 4-54 (358)
88 1b0a_A Protein (fold bifunctio 95.9 0.018 6.1E-07 58.4 8.2 96 247-390 138-235 (288)
89 1vpd_A Tartronate semialdehyde 95.9 0.013 4.5E-07 57.7 7.2 104 281-406 6-121 (299)
90 3b1f_A Putative prephenate deh 95.9 0.011 3.6E-07 58.3 6.5 108 280-408 6-125 (290)
91 1p77_A Shikimate 5-dehydrogena 95.9 0.031 1.1E-06 55.2 9.9 128 251-407 102-237 (272)
92 1qp8_A Formate dehydrogenase; 95.8 0.024 8.3E-07 57.3 9.1 100 277-403 121-229 (303)
93 1dxy_A D-2-hydroxyisocaproate 95.8 0.014 4.7E-07 59.9 7.3 104 276-404 141-253 (333)
94 3d1l_A Putative NADP oxidoredu 95.8 0.0093 3.2E-07 57.9 5.8 105 278-403 8-119 (266)
95 1yb4_A Tartronic semialdehyde 95.8 0.0055 1.9E-07 60.2 4.2 103 281-406 4-118 (295)
96 3o8q_A Shikimate 5-dehydrogena 95.8 0.086 3E-06 52.8 13.0 125 252-406 110-242 (281)
97 3pp8_A Glyoxylate/hydroxypyruv 95.8 0.0071 2.4E-07 61.7 5.0 105 277-404 136-249 (315)
98 3uuw_A Putative oxidoreductase 95.8 0.0088 3E-07 59.6 5.5 106 278-407 4-122 (308)
99 3pwz_A Shikimate dehydrogenase 95.8 0.096 3.3E-06 52.2 13.1 125 252-406 103-236 (272)
100 3l07_A Bifunctional protein fo 95.8 0.014 4.8E-07 59.1 7.0 53 247-312 140-193 (285)
101 3ba1_A HPPR, hydroxyphenylpyru 95.7 0.018 6.2E-07 59.1 7.7 101 277-404 161-271 (333)
102 2pgd_A 6-phosphogluconate dehy 95.7 0.011 3.7E-07 63.5 6.1 109 281-406 3-123 (482)
103 3cea_A MYO-inositol 2-dehydrog 95.7 0.031 1.1E-06 56.2 9.1 106 279-406 7-127 (346)
104 2p4q_A 6-phosphogluconate dehy 95.6 0.013 4.5E-07 63.3 6.5 110 280-406 10-131 (497)
105 2yq5_A D-isomer specific 2-hyd 95.6 0.015 5.2E-07 60.1 6.7 103 277-404 145-256 (343)
106 4hy3_A Phosphoglycerate oxidor 95.6 0.01 3.5E-07 62.0 5.3 105 277-404 173-286 (365)
107 1sc6_A PGDH, D-3-phosphoglycer 95.6 0.028 9.6E-07 59.3 8.6 102 277-404 142-253 (404)
108 2hmt_A YUAA protein; RCK, KTN, 95.6 0.0039 1.3E-07 53.8 1.6 32 278-309 4-35 (144)
109 3c8m_A Homoserine dehydrogenas 95.5 0.018 6.3E-07 58.9 6.9 119 280-406 6-144 (331)
110 3gg2_A Sugar dehydrogenase, UD 95.5 0.17 5.7E-06 53.9 14.6 41 281-334 3-43 (450)
111 1dlj_A UDP-glucose dehydrogena 95.5 0.089 3E-06 55.0 12.2 122 281-418 1-150 (402)
112 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.019 6.4E-07 56.0 6.4 97 277-389 28-124 (223)
113 3ezy_A Dehydrogenase; structur 95.4 0.012 4.2E-07 59.5 5.1 68 281-366 3-74 (344)
114 3l4b_C TRKA K+ channel protien 95.4 0.012 4E-07 55.6 4.6 105 281-404 1-114 (218)
115 3g79_A NDP-N-acetyl-D-galactos 95.4 0.32 1.1E-05 52.3 16.4 201 280-516 18-267 (478)
116 4hkt_A Inositol 2-dehydrogenas 95.3 0.021 7.2E-07 57.4 6.4 66 281-366 4-73 (331)
117 1nvt_A Shikimate 5'-dehydrogen 95.3 0.088 3E-06 52.2 10.9 131 249-407 109-251 (287)
118 3oj0_A Glutr, glutamyl-tRNA re 95.3 0.015 5.2E-07 51.4 4.8 69 280-367 21-91 (144)
119 2glx_A 1,5-anhydro-D-fructose 95.3 0.023 7.9E-07 56.9 6.7 104 281-406 1-117 (332)
120 3pid_A UDP-glucose 6-dehydroge 95.3 0.035 1.2E-06 59.1 8.4 202 279-517 35-266 (432)
121 3euw_A MYO-inositol dehydrogen 95.3 0.017 6E-07 58.3 5.6 67 281-366 5-75 (344)
122 3gt0_A Pyrroline-5-carboxylate 95.2 0.029 9.8E-07 54.2 6.8 109 281-411 3-124 (247)
123 3qsg_A NAD-binding phosphogluc 95.2 0.026 8.8E-07 56.8 6.6 105 280-407 24-142 (312)
124 3ic5_A Putative saccharopine d 95.2 0.019 6.6E-07 47.7 4.8 30 279-308 4-34 (118)
125 2i99_A MU-crystallin homolog; 95.2 0.051 1.7E-06 54.8 8.8 109 279-408 134-249 (312)
126 2cuk_A Glycerate dehydrogenase 95.2 0.037 1.3E-06 56.1 7.7 98 277-403 141-247 (311)
127 2gf2_A Hibadh, 3-hydroxyisobut 95.1 0.024 8.3E-07 55.6 6.1 102 281-405 1-115 (296)
128 2ho3_A Oxidoreductase, GFO/IDH 95.1 0.023 7.8E-07 57.0 5.9 106 281-406 2-117 (325)
129 3fbt_A Chorismate mutase and s 95.1 0.11 3.8E-06 52.2 10.7 121 252-407 106-235 (282)
130 2o3j_A UDP-glucose 6-dehydroge 95.1 0.24 8.2E-06 53.0 13.9 40 281-333 10-51 (481)
131 3qy9_A DHPR, dihydrodipicolina 95.0 0.047 1.6E-06 53.8 7.7 99 281-410 4-110 (243)
132 3db2_A Putative NADPH-dependen 95.0 0.046 1.6E-06 55.5 7.9 108 280-407 5-122 (354)
133 3q2i_A Dehydrogenase; rossmann 95.0 0.024 8.1E-07 57.6 5.6 105 279-406 12-130 (354)
134 1ff9_A Saccharopine reductase; 94.9 0.012 4.2E-07 62.6 3.4 116 279-411 2-125 (450)
135 3rc1_A Sugar 3-ketoreductase; 94.9 0.054 1.9E-06 55.2 7.9 111 278-408 25-146 (350)
136 1mv8_A GMD, GDP-mannose 6-dehy 94.8 0.23 7.9E-06 52.2 12.9 41 281-334 1-41 (436)
137 3tri_A Pyrroline-5-carboxylate 94.8 0.033 1.1E-06 55.3 5.9 109 280-410 3-124 (280)
138 4a26_A Putative C-1-tetrahydro 94.8 0.056 1.9E-06 55.0 7.6 54 246-312 143-197 (300)
139 1j4a_A D-LDH, D-lactate dehydr 94.8 0.031 1.1E-06 57.2 5.8 103 277-404 143-255 (333)
140 3tnl_A Shikimate dehydrogenase 94.8 0.14 4.9E-06 52.2 10.7 133 251-406 137-283 (315)
141 2uyy_A N-PAC protein; long-cha 94.7 0.025 8.5E-07 56.4 5.0 104 281-406 31-146 (316)
142 3jyo_A Quinate/shikimate dehyd 94.7 0.17 6E-06 50.6 11.1 128 252-406 111-249 (283)
143 3l9w_A Glutathione-regulated p 94.7 0.033 1.1E-06 58.8 6.0 105 280-404 4-117 (413)
144 3ggo_A Prephenate dehydrogenas 94.7 0.079 2.7E-06 53.6 8.6 91 279-389 32-131 (314)
145 2dvm_A Malic enzyme, 439AA lon 94.7 0.047 1.6E-06 58.3 7.2 126 271-406 179-315 (439)
146 4dio_A NAD(P) transhydrogenase 94.7 0.037 1.3E-06 58.6 6.2 116 277-406 187-336 (405)
147 1bg6_A N-(1-D-carboxylethyl)-L 94.6 0.063 2.1E-06 53.9 7.6 107 281-402 5-126 (359)
148 1edz_A 5,10-methylenetetrahydr 94.5 0.078 2.7E-06 54.4 8.1 147 246-420 146-302 (320)
149 3e9m_A Oxidoreductase, GFO/IDH 94.5 0.066 2.3E-06 53.9 7.4 109 279-409 4-125 (330)
150 4had_A Probable oxidoreductase 94.5 0.06 2E-06 54.3 7.0 67 281-365 24-95 (350)
151 3ojo_A CAP5O; rossmann fold, c 94.4 1.3 4.4E-05 47.0 17.5 199 279-516 10-247 (431)
152 1tlt_A Putative oxidoreductase 94.3 0.029 1E-06 56.0 4.3 106 279-407 4-121 (319)
153 4huj_A Uncharacterized protein 94.2 0.046 1.6E-06 52.1 5.2 90 280-389 23-116 (220)
154 2q3e_A UDP-glucose 6-dehydroge 94.2 1.2 4.2E-05 47.2 16.8 28 281-308 6-35 (467)
155 1x13_A NAD(P) transhydrogenase 94.2 0.033 1.1E-06 58.5 4.6 31 278-308 170-200 (401)
156 3p2y_A Alanine dehydrogenase/p 94.2 0.033 1.1E-06 58.5 4.5 32 277-308 181-212 (381)
157 3u3x_A Oxidoreductase; structu 94.1 0.064 2.2E-06 55.0 6.5 109 279-406 25-143 (361)
158 3kb6_A D-lactate dehydrogenase 94.1 0.083 2.8E-06 54.2 7.3 103 277-403 138-249 (334)
159 1ydw_A AX110P-like protein; st 94.0 0.069 2.4E-06 54.3 6.5 108 280-406 6-126 (362)
160 3ngx_A Bifunctional protein fo 94.0 0.11 3.8E-06 52.3 7.8 48 247-308 131-179 (276)
161 2g5c_A Prephenate dehydrogenas 94.0 0.12 3.9E-06 50.5 7.7 100 281-400 2-112 (281)
162 2g82_O GAPDH, glyceraldehyde-3 93.9 0.4 1.4E-05 49.3 11.9 32 281-312 1-32 (331)
163 3mtj_A Homoserine dehydrogenas 93.9 0.17 5.7E-06 54.1 9.3 112 279-415 9-140 (444)
164 2g1u_A Hypothetical protein TM 93.9 0.069 2.3E-06 47.7 5.5 36 275-310 14-49 (155)
165 3e18_A Oxidoreductase; dehydro 93.9 0.059 2E-06 55.1 5.6 86 279-385 4-96 (359)
166 3c24_A Putative oxidoreductase 93.8 0.082 2.8E-06 52.0 6.4 86 281-389 12-104 (286)
167 1xea_A Oxidoreductase, GFO/IDH 93.8 0.077 2.6E-06 53.1 6.2 104 281-406 3-118 (323)
168 1z82_A Glycerol-3-phosphate de 93.8 0.22 7.4E-06 50.2 9.5 105 280-400 14-128 (335)
169 4e12_A Diketoreductase; oxidor 93.8 0.082 2.8E-06 52.2 6.2 41 281-334 5-45 (283)
170 1gq2_A Malic enzyme; oxidoredu 93.7 0.22 7.6E-06 54.4 9.9 177 171-388 203-397 (555)
171 1j5p_A Aspartate dehydrogenase 93.7 0.1 3.4E-06 51.9 6.7 70 280-379 12-83 (253)
172 1h6d_A Precursor form of gluco 93.7 0.077 2.6E-06 55.9 6.2 111 278-406 81-205 (433)
173 3mz0_A Inositol 2-dehydrogenas 93.6 0.12 4.3E-06 52.1 7.4 68 281-365 3-75 (344)
174 1o0s_A NAD-ME, NAD-dependent m 93.6 0.21 7.1E-06 55.1 9.5 175 172-388 242-435 (605)
175 1zej_A HBD-9, 3-hydroxyacyl-CO 93.6 0.15 5.1E-06 51.5 7.9 72 280-368 12-85 (293)
176 2ew2_A 2-dehydropantoate 2-red 93.6 0.12 4.2E-06 50.4 7.1 107 281-401 4-124 (316)
177 4h3v_A Oxidoreductase domain p 93.5 0.12 4.1E-06 52.1 7.2 111 278-407 4-134 (390)
178 2z2v_A Hypothetical protein PH 93.5 0.033 1.1E-06 57.7 3.0 117 279-413 15-136 (365)
179 1y81_A Conserved hypothetical 93.5 0.32 1.1E-05 43.5 9.0 110 278-419 12-130 (138)
180 2ejw_A HDH, homoserine dehydro 93.5 0.072 2.5E-06 54.8 5.4 63 281-367 4-77 (332)
181 2czc_A Glyceraldehyde-3-phosph 93.5 0.055 1.9E-06 55.3 4.5 33 281-313 3-36 (334)
182 3ec7_A Putative dehydrogenase; 93.5 0.11 3.7E-06 53.1 6.7 72 277-365 20-96 (357)
183 1kyq_A Met8P, siroheme biosynt 93.4 0.058 2E-06 54.1 4.5 35 277-311 10-44 (274)
184 3cps_A Glyceraldehyde 3-phosph 93.4 0.44 1.5E-05 49.4 11.3 32 280-311 17-49 (354)
185 3e8x_A Putative NAD-dependent 93.3 0.11 3.8E-06 48.9 6.1 34 277-310 18-52 (236)
186 3ktd_A Prephenate dehydrogenas 93.3 0.075 2.6E-06 54.7 5.3 104 280-407 8-122 (341)
187 3u62_A Shikimate dehydrogenase 93.3 0.071 2.4E-06 52.6 4.9 109 277-409 106-222 (253)
188 2vns_A Metalloreductase steap3 93.3 0.071 2.4E-06 50.6 4.7 88 279-389 27-118 (215)
189 1rm4_O Glyceraldehyde 3-phosph 93.3 0.51 1.7E-05 48.7 11.4 32 281-312 2-36 (337)
190 1l7d_A Nicotinamide nucleotide 93.3 0.049 1.7E-06 56.6 3.8 32 277-308 169-200 (384)
191 3don_A Shikimate dehydrogenase 93.2 0.044 1.5E-06 54.9 3.3 123 251-406 100-230 (277)
192 2f1k_A Prephenate dehydrogenas 93.2 0.15 5E-06 49.7 7.0 87 281-389 1-94 (279)
193 3t4e_A Quinate/shikimate dehyd 93.2 0.58 2E-05 47.6 11.6 133 251-407 131-278 (312)
194 2rcy_A Pyrroline carboxylate r 93.2 0.05 1.7E-06 52.4 3.5 105 279-411 3-118 (262)
195 2ixa_A Alpha-N-acetylgalactosa 93.2 0.09 3.1E-06 55.4 5.7 112 278-406 18-146 (444)
196 1id1_A Putative potassium chan 93.2 0.085 2.9E-06 46.9 4.8 108 279-404 2-120 (153)
197 2dpo_A L-gulonate 3-dehydrogen 93.2 0.11 3.7E-06 52.9 6.1 41 280-333 6-46 (319)
198 3h9e_O Glyceraldehyde-3-phosph 93.2 0.76 2.6E-05 47.6 12.4 33 280-312 7-39 (346)
199 2p2s_A Putative oxidoreductase 93.1 0.14 4.8E-06 51.4 6.8 69 279-365 3-75 (336)
200 3bio_A Oxidoreductase, GFO/IDH 93.1 0.19 6.5E-06 50.4 7.7 102 279-406 8-121 (304)
201 2vhw_A Alanine dehydrogenase; 93.1 0.12 4E-06 53.6 6.4 74 277-365 165-240 (377)
202 3rwb_A TPLDH, pyridoxal 4-dehy 93.1 0.14 4.6E-06 49.2 6.4 47 277-336 3-50 (247)
203 3b1j_A Glyceraldehyde 3-phosph 93.0 0.66 2.2E-05 47.8 11.8 32 281-312 3-37 (339)
204 1np3_A Ketol-acid reductoisome 93.0 0.035 1.2E-06 56.6 2.2 31 278-308 14-44 (338)
205 2d59_A Hypothetical protein PH 93.0 0.44 1.5E-05 42.7 9.2 98 280-406 22-128 (144)
206 3ohs_X Trans-1,2-dihydrobenzen 93.0 0.11 3.7E-06 52.3 5.8 104 281-406 3-121 (334)
207 4fb5_A Probable oxidoreductase 93.0 0.16 5.5E-06 51.3 7.0 71 277-365 22-103 (393)
208 2izz_A Pyrroline-5-carboxylate 92.9 0.17 5.9E-06 50.9 7.1 102 279-400 21-132 (322)
209 1omo_A Alanine dehydrogenase; 92.9 0.73 2.5E-05 46.7 11.8 108 279-406 124-238 (322)
210 3kux_A Putative oxidoreductase 92.8 0.27 9.3E-06 49.8 8.5 105 280-406 7-122 (352)
211 3btv_A Galactose/lactose metab 92.7 0.068 2.3E-06 56.3 4.1 107 280-406 20-150 (438)
212 2axq_A Saccharopine dehydrogen 92.7 0.062 2.1E-06 57.6 3.8 119 277-413 20-147 (467)
213 2eez_A Alanine dehydrogenase; 92.7 0.14 4.7E-06 52.8 6.3 75 277-366 163-239 (369)
214 1pj3_A NAD-dependent malic enz 92.7 0.18 6.3E-06 55.2 7.4 177 172-388 206-402 (564)
215 3c1a_A Putative oxidoreductase 92.7 0.028 9.4E-07 56.2 0.9 103 280-407 10-125 (315)
216 4fs3_A Enoyl-[acyl-carrier-pro 92.7 0.11 3.7E-06 50.5 5.1 32 277-308 3-37 (256)
217 1i36_A Conserved hypothetical 92.6 0.23 7.9E-06 47.8 7.4 100 281-402 1-106 (264)
218 3moi_A Probable dehydrogenase; 92.6 0.093 3.2E-06 54.1 4.7 84 281-384 3-94 (387)
219 1f0y_A HCDH, L-3-hydroxyacyl-C 92.5 0.16 5.6E-06 50.3 6.3 28 281-308 16-43 (302)
220 2d2i_A Glyceraldehyde 3-phosph 92.5 0.67 2.3E-05 48.6 11.1 32 281-312 3-37 (380)
221 3phh_A Shikimate dehydrogenase 92.5 0.45 1.5E-05 47.5 9.4 104 280-407 118-229 (269)
222 1zh8_A Oxidoreductase; TM0312, 92.4 0.26 9E-06 49.8 7.8 106 279-406 17-137 (340)
223 2x5j_O E4PDH, D-erythrose-4-ph 92.3 0.73 2.5E-05 47.4 11.0 32 281-312 3-38 (339)
224 1hdg_O Holo-D-glyceraldehyde-3 92.3 0.78 2.7E-05 47.1 11.2 32 281-312 1-35 (332)
225 4gqa_A NAD binding oxidoreduct 92.3 0.21 7.2E-06 51.7 7.0 67 281-365 27-105 (412)
226 1npy_A Hypothetical shikimate 92.3 1.4 4.7E-05 43.7 12.6 126 249-408 101-235 (271)
227 1obf_O Glyceraldehyde 3-phosph 92.2 0.85 2.9E-05 47.0 11.3 32 281-312 2-37 (335)
228 2duw_A Putative COA-binding pr 92.2 0.49 1.7E-05 42.5 8.5 109 280-419 13-131 (145)
229 3abi_A Putative uncharacterize 92.1 0.11 3.9E-06 53.1 4.7 114 277-410 11-133 (365)
230 4f3y_A DHPR, dihydrodipicolina 92.1 0.12 4.1E-06 51.6 4.7 115 278-410 5-131 (272)
231 3tum_A Shikimate dehydrogenase 92.1 2 6.8E-05 42.7 13.5 130 251-407 108-246 (269)
232 3e5r_O PP38, glyceraldehyde-3- 92.0 0.47 1.6E-05 48.8 9.1 32 281-312 4-36 (337)
233 3gdo_A Uncharacterized oxidore 92.0 0.12 4.2E-06 52.6 4.7 106 279-406 4-120 (358)
234 3cmc_O GAPDH, glyceraldehyde-3 92.0 0.76 2.6E-05 47.2 10.6 32 281-312 2-34 (334)
235 3two_A Mannitol dehydrogenase; 92.0 0.6 2.1E-05 47.0 9.8 32 279-310 176-207 (348)
236 3e82_A Putative oxidoreductase 91.9 0.2 6.8E-06 51.3 6.2 83 280-384 7-97 (364)
237 4g65_A TRK system potassium up 91.9 0.059 2E-06 57.6 2.3 71 280-367 3-79 (461)
238 3nv9_A Malic enzyme; rossmann 91.9 0.6 2.1E-05 50.2 9.9 171 183-393 153-336 (487)
239 2y0c_A BCEC, UDP-glucose dehyd 91.8 1.6 5.4E-05 46.7 13.3 42 280-334 8-49 (478)
240 4e6p_A Probable sorbitol dehyd 91.8 0.14 5E-06 49.2 4.7 47 277-336 5-52 (259)
241 4b4u_A Bifunctional protein fo 91.7 0.39 1.3E-05 48.9 8.0 50 247-308 158-208 (303)
242 1dih_A Dihydrodipicolinate red 91.6 0.21 7.1E-06 49.7 5.8 113 279-409 4-129 (273)
243 1nvm_B Acetaldehyde dehydrogen 91.6 0.13 4.6E-06 52.1 4.4 87 280-385 4-104 (312)
244 3mog_A Probable 3-hydroxybutyr 91.6 0.22 7.5E-06 53.6 6.3 42 280-334 5-46 (483)
245 2nvw_A Galactose/lactose metab 91.5 0.36 1.2E-05 51.6 7.9 107 279-405 38-169 (479)
246 4a7p_A UDP-glucose dehydrogena 91.5 2.4 8.2E-05 45.1 14.1 29 280-308 8-36 (446)
247 1x7d_A Ornithine cyclodeaminas 91.3 1.3 4.4E-05 45.6 11.6 114 279-410 128-250 (350)
248 1p9l_A Dihydrodipicolinate red 91.2 0.53 1.8E-05 46.3 8.2 82 281-398 1-87 (245)
249 1iuk_A Hypothetical protein TT 91.1 0.69 2.4E-05 41.3 8.1 108 280-420 13-132 (140)
250 3ff4_A Uncharacterized protein 91.0 0.53 1.8E-05 41.5 7.2 102 281-417 5-116 (122)
251 3ijp_A DHPR, dihydrodipicolina 91.0 0.069 2.4E-06 54.0 1.6 114 280-411 21-147 (288)
252 3m2t_A Probable dehydrogenase; 91.0 0.16 5.6E-06 51.8 4.4 106 279-406 4-123 (359)
253 4eso_A Putative oxidoreductase 91.0 0.17 5.9E-06 48.8 4.4 47 277-336 5-52 (255)
254 2aef_A Calcium-gated potassium 91.0 0.095 3.3E-06 49.8 2.5 107 280-408 9-126 (234)
255 2vt3_A REX, redox-sensing tran 90.9 0.12 4.1E-06 50.0 3.2 41 270-313 78-120 (215)
256 4ej6_A Putative zinc-binding d 90.9 0.88 3E-05 46.4 9.9 119 271-407 177-308 (370)
257 3i83_A 2-dehydropantoate 2-red 90.8 0.49 1.7E-05 47.3 7.7 109 281-406 3-126 (320)
258 1y1p_A ARII, aldehyde reductas 90.7 0.72 2.5E-05 45.1 8.6 34 277-310 8-42 (342)
259 3n74_A 3-ketoacyl-(acyl-carrie 90.5 0.23 7.8E-06 47.5 4.8 47 277-336 6-53 (261)
260 3keo_A Redox-sensing transcrip 90.5 0.11 3.6E-06 50.4 2.3 110 171-313 6-119 (212)
261 4dqx_A Probable oxidoreductase 90.5 0.22 7.5E-06 48.8 4.7 47 277-336 24-71 (277)
262 1hdc_A 3-alpha, 20 beta-hydrox 90.5 0.2 6.9E-06 48.1 4.3 33 277-309 2-35 (254)
263 3evn_A Oxidoreductase, GFO/IDH 90.4 0.16 5.5E-06 51.0 3.8 35 279-313 4-39 (329)
264 3rd5_A Mypaa.01249.C; ssgcid, 90.3 0.41 1.4E-05 46.8 6.5 46 277-335 13-59 (291)
265 3dty_A Oxidoreductase, GFO/IDH 90.3 0.32 1.1E-05 50.3 5.9 73 278-365 10-94 (398)
266 3upl_A Oxidoreductase; rossman 90.1 0.1 3.6E-06 55.8 2.1 132 279-425 22-180 (446)
267 1evy_A Glycerol-3-phosphate de 90.1 0.23 7.7E-06 50.5 4.5 98 277-389 11-127 (366)
268 1yqd_A Sinapyl alcohol dehydro 90.0 0.47 1.6E-05 48.3 6.8 32 279-310 187-218 (366)
269 3gvc_A Oxidoreductase, probabl 89.9 0.21 7.1E-06 49.0 4.0 47 277-336 26-73 (277)
270 2dc1_A L-aspartate dehydrogena 89.9 0.34 1.2E-05 46.4 5.4 96 281-405 1-105 (236)
271 4g81_D Putative hexonate dehyd 89.8 0.47 1.6E-05 46.8 6.3 45 277-334 6-51 (255)
272 1pjq_A CYSG, siroheme synthase 89.7 0.28 9.6E-06 52.2 5.1 35 277-311 9-43 (457)
273 2ep7_A GAPDH, glyceraldehyde-3 89.7 1 3.6E-05 46.5 9.1 32 281-312 3-35 (342)
274 3v5n_A Oxidoreductase; structu 89.7 0.57 1.9E-05 48.9 7.3 90 278-384 35-140 (417)
275 3grp_A 3-oxoacyl-(acyl carrier 89.7 0.23 7.9E-06 48.4 4.0 47 277-336 24-71 (266)
276 2qyt_A 2-dehydropantoate 2-red 89.7 0.17 5.8E-06 49.7 3.1 95 281-391 9-122 (317)
277 4b7c_A Probable oxidoreductase 89.6 0.31 1.1E-05 48.7 5.0 75 279-366 149-228 (336)
278 3zv4_A CIS-2,3-dihydrobiphenyl 89.6 0.28 9.4E-06 48.0 4.5 46 278-336 3-49 (281)
279 3i23_A Oxidoreductase, GFO/IDH 89.6 0.56 1.9E-05 47.4 7.0 104 281-406 3-120 (349)
280 2yjz_A Metalloreductase steap4 89.1 0.066 2.2E-06 50.7 0.0 32 277-308 16-47 (201)
281 1zcj_A Peroxisomal bifunctiona 89.5 0.81 2.8E-05 48.7 8.4 29 280-308 37-65 (463)
282 3f9i_A 3-oxoacyl-[acyl-carrier 89.5 0.28 9.7E-06 46.5 4.4 48 276-336 10-58 (249)
283 4fn4_A Short chain dehydrogena 89.4 0.42 1.4E-05 47.1 5.7 46 277-335 4-50 (254)
284 3kkj_A Amine oxidase, flavin-c 89.4 0.29 1E-05 43.6 4.2 30 282-312 4-33 (336)
285 3k96_A Glycerol-3-phosphate de 89.3 0.35 1.2E-05 49.8 5.2 96 280-389 29-136 (356)
286 1u8f_O GAPDH, glyceraldehyde-3 89.2 2.1 7.2E-05 43.8 10.9 31 281-311 4-35 (335)
287 1lu9_A Methylene tetrahydromet 89.1 1 3.6E-05 44.2 8.4 48 250-308 100-148 (287)
288 3tzq_B Short-chain type dehydr 89.1 0.2 6.7E-06 48.8 3.1 34 277-310 8-42 (271)
289 3h8v_A Ubiquitin-like modifier 89.1 0.26 8.8E-06 49.8 4.0 36 277-312 33-68 (292)
290 3ghy_A Ketopantoate reductase 89.1 0.35 1.2E-05 48.7 5.1 92 280-388 3-106 (335)
291 1yde_A Retinal dehydrogenase/r 89.1 0.34 1.2E-05 47.1 4.8 33 277-309 6-39 (270)
292 2ew8_A (S)-1-phenylethanol deh 89.1 0.29 1E-05 46.7 4.2 33 277-309 4-37 (249)
293 3o38_A Short chain dehydrogena 89.0 0.49 1.7E-05 45.4 5.8 33 277-309 19-53 (266)
294 1uls_A Putative 3-oxoacyl-acyl 88.8 0.38 1.3E-05 45.9 4.8 32 278-309 3-35 (245)
295 1r0k_A 1-deoxy-D-xylulose 5-ph 88.8 0.36 1.2E-05 50.7 4.9 115 281-408 5-149 (388)
296 1txg_A Glycerol-3-phosphate de 88.8 0.43 1.5E-05 47.3 5.4 104 281-401 1-125 (335)
297 3k6j_A Protein F01G10.3, confi 88.7 0.81 2.8E-05 49.1 7.7 28 281-308 55-82 (460)
298 4hp8_A 2-deoxy-D-gluconate 3-d 88.6 0.89 3E-05 44.7 7.4 32 277-308 6-38 (247)
299 3nrc_A Enoyl-[acyl-carrier-pro 88.6 0.26 9E-06 48.0 3.6 34 277-310 23-59 (280)
300 1zk4_A R-specific alcohol dehy 88.6 0.72 2.5E-05 43.4 6.5 34 277-310 3-37 (251)
301 1pjc_A Protein (L-alanine dehy 88.5 0.55 1.9E-05 48.2 6.1 71 278-366 165-240 (361)
302 3gpi_A NAD-dependent epimerase 88.5 0.38 1.3E-05 46.4 4.6 34 279-312 2-35 (286)
303 3hwr_A 2-dehydropantoate 2-red 88.4 0.92 3.2E-05 45.4 7.5 97 278-391 17-125 (318)
304 2o23_A HADH2 protein; HSD17B10 88.4 0.23 7.8E-06 47.3 2.9 34 277-310 9-43 (265)
305 1gad_O D-glyceraldehyde-3-phos 88.2 2.7 9.1E-05 43.0 10.9 32 281-312 2-34 (330)
306 4dyv_A Short-chain dehydrogena 88.1 0.29 1E-05 47.8 3.6 46 278-336 26-72 (272)
307 2dph_A Formaldehyde dismutase; 88.1 0.47 1.6E-05 48.9 5.2 31 279-309 185-216 (398)
308 3o26_A Salutaridine reductase; 87.8 0.78 2.7E-05 44.4 6.4 34 277-310 9-43 (311)
309 3tpc_A Short chain alcohol deh 87.8 0.18 6.2E-06 48.3 1.8 34 277-310 4-38 (257)
310 1v3u_A Leukotriene B4 12- hydr 87.7 0.63 2.1E-05 46.4 5.8 75 279-367 145-225 (333)
311 2raf_A Putative dinucleotide-b 87.7 0.51 1.7E-05 44.5 4.8 32 277-308 16-47 (209)
312 3ip1_A Alcohol dehydrogenase, 87.5 1.2 4.3E-05 45.8 8.0 31 279-309 213-244 (404)
313 2j3h_A NADP-dependent oxidored 87.4 0.58 2E-05 46.8 5.3 31 279-309 155-186 (345)
314 3f4l_A Putative oxidoreductase 87.1 0.19 6.4E-06 50.8 1.5 103 281-406 3-120 (345)
315 2v6b_A L-LDH, L-lactate dehydr 86.8 1.4 4.8E-05 44.1 7.8 71 281-365 1-76 (304)
316 4fgs_A Probable dehydrogenase 86.8 0.9 3.1E-05 45.2 6.3 48 277-337 26-74 (273)
317 1x0v_A GPD-C, GPDH-C, glycerol 86.8 0.41 1.4E-05 48.1 3.8 101 279-389 7-127 (354)
318 4ina_A Saccharopine dehydrogen 86.8 0.41 1.4E-05 50.0 3.9 116 281-413 2-144 (405)
319 3hn2_A 2-dehydropantoate 2-red 86.8 0.71 2.4E-05 46.0 5.5 92 281-390 3-107 (312)
320 1jw9_B Molybdopterin biosynthe 86.8 0.28 9.7E-06 47.8 2.5 35 279-313 30-64 (249)
321 2zb4_A Prostaglandin reductase 86.7 0.62 2.1E-05 47.0 5.1 75 279-366 158-240 (357)
322 3fhl_A Putative oxidoreductase 86.6 0.89 3E-05 46.2 6.2 35 279-313 4-40 (362)
323 1jvb_A NAD(H)-dependent alcoho 86.5 0.99 3.4E-05 45.4 6.5 93 279-385 170-271 (347)
324 3vku_A L-LDH, L-lactate dehydr 86.4 1.1 3.9E-05 45.7 6.9 75 279-367 8-87 (326)
325 1hdo_A Biliverdin IX beta redu 86.4 0.87 3E-05 41.0 5.4 33 279-311 2-35 (206)
326 3qiv_A Short-chain dehydrogena 86.3 1.1 3.7E-05 42.5 6.4 33 277-309 6-39 (253)
327 1cyd_A Carbonyl reductase; sho 86.2 1.2 3.9E-05 41.8 6.4 34 277-310 4-38 (244)
328 3d3w_A L-xylulose reductase; u 86.1 1.2 4.1E-05 41.8 6.4 34 277-310 4-38 (244)
329 1f06_A MESO-diaminopimelate D- 86.0 0.54 1.9E-05 47.4 4.2 90 280-394 3-98 (320)
330 4g65_A TRK system potassium up 85.9 1.5 5.2E-05 46.6 7.8 104 279-405 234-349 (461)
331 1zmo_A Halohydrin dehalogenase 85.6 1.6 5.4E-05 41.4 7.1 29 280-308 1-30 (244)
332 4ibo_A Gluconate dehydrogenase 85.6 1.2 4.1E-05 43.4 6.3 45 277-334 23-68 (271)
333 3lk7_A UDP-N-acetylmuramoylala 85.6 0.81 2.8E-05 48.2 5.5 35 277-312 6-40 (451)
334 1zud_1 Adenylyltransferase THI 85.5 0.56 1.9E-05 45.8 3.9 35 279-313 27-61 (251)
335 4eez_A Alcohol dehydrogenase 1 85.5 1.6 5.5E-05 43.5 7.4 119 270-406 157-284 (348)
336 1d7o_A Enoyl-[acyl-carrier pro 85.5 1.2 4.1E-05 43.5 6.4 34 277-310 5-41 (297)
337 3dii_A Short-chain dehydrogena 85.4 0.53 1.8E-05 44.9 3.7 43 280-335 2-45 (247)
338 1rjw_A ADH-HT, alcohol dehydro 85.4 1.8 6.1E-05 43.4 7.7 30 279-308 164-193 (339)
339 3m1a_A Putative dehydrogenase; 85.3 0.31 1.1E-05 47.2 2.0 33 278-310 3-36 (281)
340 4dup_A Quinone oxidoreductase; 85.3 0.79 2.7E-05 46.3 5.1 32 279-310 167-199 (353)
341 3svt_A Short-chain type dehydr 85.2 1.3 4.5E-05 42.9 6.4 33 277-309 8-41 (281)
342 3ucx_A Short chain dehydrogena 85.2 1.5 5E-05 42.2 6.7 33 277-309 8-41 (264)
343 3imf_A Short chain dehydrogena 85.1 1 3.5E-05 43.2 5.5 46 277-335 3-49 (257)
344 4aj2_A L-lactate dehydrogenase 85.1 1.4 4.7E-05 45.1 6.8 75 278-366 17-97 (331)
345 2d8a_A PH0655, probable L-thre 85.1 1.1 3.7E-05 45.1 5.9 31 279-309 167-198 (348)
346 2dt5_A AT-rich DNA-binding pro 85.0 0.21 7.2E-06 48.0 0.6 39 270-312 73-113 (211)
347 3f1l_A Uncharacterized oxidore 84.9 1.4 4.7E-05 42.1 6.4 33 277-309 9-42 (252)
348 3lf2_A Short chain oxidoreduct 84.8 1.4 4.8E-05 42.4 6.4 33 277-309 5-38 (265)
349 2b4r_O Glyceraldehyde-3-phosph 84.8 5.3 0.00018 41.3 11.0 35 278-312 9-44 (345)
350 3r3s_A Oxidoreductase; structu 84.8 1.2 4.2E-05 43.7 6.1 32 277-308 46-78 (294)
351 1wdk_A Fatty oxidation complex 84.7 0.75 2.6E-05 51.8 5.0 39 280-331 314-352 (715)
352 2ozp_A N-acetyl-gamma-glutamyl 84.7 1.3 4.4E-05 45.4 6.4 32 281-312 5-38 (345)
353 3ppi_A 3-hydroxyacyl-COA dehyd 84.7 1.1 3.7E-05 43.4 5.5 47 277-336 27-74 (281)
354 2z1m_A GDP-D-mannose dehydrata 84.6 0.87 3E-05 44.6 4.9 33 278-310 1-34 (345)
355 3tox_A Short chain dehydrogena 84.6 1.4 5E-05 43.0 6.4 46 277-335 5-51 (280)
356 3a06_A 1-deoxy-D-xylulose 5-ph 84.5 1.4 4.7E-05 46.2 6.4 117 281-408 4-141 (376)
357 2yyy_A Glyceraldehyde-3-phosph 84.5 0.77 2.6E-05 47.3 4.6 32 281-312 3-35 (343)
358 3i1j_A Oxidoreductase, short c 84.5 1.2 4E-05 42.0 5.5 33 277-309 11-44 (247)
359 3fbg_A Putative arginate lyase 84.5 1.4 4.9E-05 44.2 6.5 31 279-309 150-181 (346)
360 2wsb_A Galactitol dehydrogenas 84.5 1.5 5.3E-05 41.2 6.4 34 277-310 8-42 (254)
361 2wtb_A MFP2, fatty acid multif 84.5 1.5 5.2E-05 49.4 7.3 39 281-332 313-351 (725)
362 1u7z_A Coenzyme A biosynthesis 84.4 1.1 3.8E-05 43.6 5.5 36 277-312 5-57 (226)
363 2jah_A Clavulanic acid dehydro 84.4 1.6 5.5E-05 41.5 6.5 33 277-309 4-37 (247)
364 2o7s_A DHQ-SDH PR, bifunctiona 84.3 1.7 5.7E-05 46.9 7.3 137 248-405 331-479 (523)
365 2pd6_A Estradiol 17-beta-dehyd 84.3 1.7 5.7E-05 41.2 6.6 34 277-310 4-38 (264)
366 3awd_A GOX2181, putative polyo 84.3 1.6 5.4E-05 41.2 6.4 33 278-310 11-44 (260)
367 2i76_A Hypothetical protein; N 84.3 0.52 1.8E-05 46.1 3.1 85 281-388 3-91 (276)
368 2pzm_A Putative nucleotide sug 84.1 0.96 3.3E-05 44.7 5.0 37 275-311 15-52 (330)
369 2ehd_A Oxidoreductase, oxidore 84.1 0.72 2.5E-05 43.1 3.9 32 279-310 4-36 (234)
370 3ai3_A NADPH-sorbose reductase 84.1 1.6 5.5E-05 41.7 6.4 33 277-309 4-37 (263)
371 1nff_A Putative oxidoreductase 84.0 1.7 5.9E-05 41.7 6.7 33 277-309 4-37 (260)
372 3ioy_A Short-chain dehydrogena 84.0 1.6 5.5E-05 43.5 6.6 33 277-309 5-38 (319)
373 2cdc_A Glucose dehydrogenase g 83.9 0.8 2.7E-05 46.5 4.4 32 279-310 180-211 (366)
374 2ae2_A Protein (tropinone redu 83.9 1.7 5.7E-05 41.6 6.4 33 277-309 6-39 (260)
375 1lnq_A MTHK channels, potassiu 83.8 0.56 1.9E-05 47.0 3.2 107 280-408 115-232 (336)
376 1yj8_A Glycerol-3-phosphate de 83.8 0.49 1.7E-05 48.4 2.7 28 281-308 22-56 (375)
377 1jay_A Coenzyme F420H2:NADP+ o 83.7 1.4 4.7E-05 40.7 5.6 92 281-388 1-99 (212)
378 3ip3_A Oxidoreductase, putativ 83.7 0.75 2.6E-05 46.2 4.0 71 281-365 3-76 (337)
379 3ldh_A Lactate dehydrogenase; 83.6 1.6 5.3E-05 44.9 6.4 75 279-367 20-100 (330)
380 1hxh_A 3BETA/17BETA-hydroxyste 83.6 1.6 5.4E-05 41.7 6.1 46 277-335 3-49 (253)
381 3lyl_A 3-oxoacyl-(acyl-carrier 83.5 1.3 4.6E-05 41.7 5.5 33 278-310 3-36 (247)
382 1zem_A Xylitol dehydrogenase; 83.5 1.8 6.2E-05 41.5 6.5 33 277-309 4-37 (262)
383 3doc_A Glyceraldehyde 3-phosph 83.5 8.6 0.00029 39.6 11.8 32 281-312 3-37 (335)
384 3pk0_A Short-chain dehydrogena 83.5 1.3 4.4E-05 42.7 5.5 33 277-309 7-40 (262)
385 2z1n_A Dehydrogenase; reductas 83.5 1.8 6E-05 41.4 6.4 33 277-309 4-37 (260)
386 3uce_A Dehydrogenase; rossmann 83.4 2 6.8E-05 40.0 6.6 33 278-310 4-37 (223)
387 3op4_A 3-oxoacyl-[acyl-carrier 83.4 1.4 4.7E-05 42.1 5.6 33 277-309 6-39 (248)
388 3ak4_A NADH-dependent quinucli 83.4 1.7 5.7E-05 41.6 6.2 33 277-309 9-42 (263)
389 3vps_A TUNA, NAD-dependent epi 83.3 0.99 3.4E-05 43.7 4.6 34 278-311 5-39 (321)
390 2hq1_A Glucose/ribitol dehydro 83.3 1.2 4E-05 41.8 5.0 34 278-311 3-37 (247)
391 1yb5_A Quinone oxidoreductase; 83.2 1.3 4.3E-05 44.9 5.5 32 279-310 170-202 (351)
392 1e3j_A NADP(H)-dependent ketos 83.2 2.1 7.2E-05 43.0 7.2 36 271-309 163-198 (352)
393 1vl8_A Gluconate 5-dehydrogena 83.2 1.8 6.2E-05 41.8 6.4 34 276-309 17-51 (267)
394 4gkb_A 3-oxoacyl-[acyl-carrier 83.1 3 0.0001 40.9 8.0 34 277-310 4-38 (258)
395 4hb9_A Similarities with proba 83.1 1 3.6E-05 44.9 4.8 31 281-312 2-32 (412)
396 3tjr_A Short chain dehydrogena 83.1 1.7 5.9E-05 42.8 6.4 33 277-309 28-61 (301)
397 3pym_A GAPDH 3, glyceraldehyde 83.1 14 0.00049 37.9 13.2 32 281-312 2-34 (332)
398 3pqe_A L-LDH, L-lactate dehydr 83.1 1.3 4.4E-05 45.2 5.5 73 279-366 4-83 (326)
399 3vtf_A UDP-glucose 6-dehydroge 83.1 1 3.4E-05 48.1 4.9 40 281-333 22-61 (444)
400 1iy8_A Levodione reductase; ox 83.1 1.9 6.3E-05 41.4 6.4 33 277-309 10-43 (267)
401 2b4q_A Rhamnolipids biosynthes 83.1 2 7E-05 41.7 6.8 32 277-308 26-58 (276)
402 1f8f_A Benzyl alcohol dehydrog 83.1 1.3 4.3E-05 45.0 5.4 31 279-309 190-221 (371)
403 2c0c_A Zinc binding alcohol de 83.1 1 3.6E-05 45.7 4.8 32 279-310 163-195 (362)
404 3ged_A Short-chain dehydrogena 83.1 1.1 3.6E-05 44.0 4.7 73 280-365 2-84 (247)
405 3gms_A Putative NADPH:quinone 83.0 0.88 3E-05 45.6 4.2 32 279-310 144-176 (340)
406 4egf_A L-xylulose reductase; s 83.0 1.4 4.7E-05 42.6 5.4 33 277-309 17-50 (266)
407 3rkr_A Short chain oxidoreduct 83.0 1.4 4.9E-05 42.2 5.5 33 277-309 26-59 (262)
408 2pd4_A Enoyl-[acyl-carrier-pro 83.0 1.4 4.7E-05 42.6 5.5 34 277-310 3-39 (275)
409 1qor_A Quinone oxidoreductase; 82.9 1.2 4E-05 44.3 5.0 31 279-309 140-171 (327)
410 3s2e_A Zinc-containing alcohol 82.9 2 6.9E-05 42.9 6.8 31 279-309 166-196 (340)
411 3jyn_A Quinone oxidoreductase; 82.9 1 3.6E-05 44.8 4.7 93 279-386 140-240 (325)
412 2j8z_A Quinone oxidoreductase; 82.8 1.5 5E-05 44.4 5.8 75 279-367 162-242 (354)
413 3m6i_A L-arabinitol 4-dehydrog 82.8 1.8 6.2E-05 43.6 6.5 36 270-308 173-209 (363)
414 3ius_A Uncharacterized conserv 82.8 0.95 3.2E-05 43.4 4.2 31 280-310 5-35 (286)
415 3oig_A Enoyl-[acyl-carrier-pro 82.8 1.6 5.4E-05 41.8 5.7 34 277-310 4-40 (266)
416 3qwb_A Probable quinone oxidor 82.7 1.2 4E-05 44.5 5.0 32 279-310 148-180 (334)
417 4id9_A Short-chain dehydrogena 82.7 0.93 3.2E-05 44.8 4.2 35 277-311 16-51 (347)
418 3edm_A Short chain dehydrogena 82.7 1.6 5.6E-05 41.9 5.8 36 277-312 5-41 (259)
419 2h7i_A Enoyl-[acyl-carrier-pro 82.7 1.3 4.4E-05 42.7 5.1 33 277-309 4-39 (269)
420 1piw_A Hypothetical zinc-type 82.6 1.7 5.8E-05 43.9 6.2 32 279-310 179-210 (360)
421 1yb1_A 17-beta-hydroxysteroid 82.6 2 6.8E-05 41.4 6.4 34 277-310 28-62 (272)
422 2qrj_A Saccharopine dehydrogen 82.3 1.4 4.6E-05 46.5 5.4 77 279-386 213-300 (394)
423 3t4x_A Oxidoreductase, short c 82.3 1.5 5.1E-05 42.3 5.4 33 277-309 7-40 (267)
424 1w6u_A 2,4-dienoyl-COA reducta 82.2 2 6.9E-05 41.7 6.4 34 277-310 23-57 (302)
425 4dry_A 3-oxoacyl-[acyl-carrier 82.2 1.3 4.3E-05 43.4 4.9 33 277-309 30-63 (281)
426 4fc7_A Peroxisomal 2,4-dienoyl 82.2 1.9 6.5E-05 41.8 6.1 33 277-309 24-57 (277)
427 3gaf_A 7-alpha-hydroxysteroid 82.1 1.4 4.8E-05 42.3 5.1 33 277-309 9-42 (256)
428 2wyu_A Enoyl-[acyl carrier pro 82.1 1.4 4.7E-05 42.3 5.0 34 277-310 5-41 (261)
429 1fmc_A 7 alpha-hydroxysteroid 82.0 1.5 5.2E-05 41.2 5.2 34 277-310 8-42 (255)
430 3pgx_A Carveol dehydrogenase; 82.0 2.1 7.3E-05 41.4 6.4 34 277-310 12-46 (280)
431 1ae1_A Tropinone reductase-I; 81.9 2.2 7.4E-05 41.2 6.4 33 277-309 18-51 (273)
432 1uuf_A YAHK, zinc-type alcohol 81.9 2.1 7.1E-05 43.7 6.6 32 279-310 194-225 (369)
433 3q2o_A Phosphoribosylaminoimid 81.8 3.3 0.00011 42.2 8.1 33 278-310 12-44 (389)
434 2rhc_B Actinorhodin polyketide 81.8 2.2 7.4E-05 41.4 6.4 32 278-309 20-52 (277)
435 3uve_A Carveol dehydrogenase ( 81.7 2.4 8.3E-05 41.0 6.7 35 276-310 7-42 (286)
436 3qlj_A Short chain dehydrogena 81.7 1.2 4.1E-05 44.3 4.6 33 277-309 24-57 (322)
437 1kol_A Formaldehyde dehydrogen 81.7 2.7 9.1E-05 43.0 7.3 31 279-309 185-216 (398)
438 1pl8_A Human sorbitol dehydrog 81.7 2.6 8.9E-05 42.5 7.2 37 270-309 165-202 (356)
439 3ew7_A LMO0794 protein; Q8Y8U8 81.7 1.5 5.2E-05 39.9 5.0 30 281-310 1-31 (221)
440 2cf5_A Atccad5, CAD, cinnamyl 81.7 1.9 6.5E-05 43.6 6.1 32 279-310 180-211 (357)
441 3l6e_A Oxidoreductase, short-c 81.6 2 7E-05 40.6 6.0 44 279-335 2-46 (235)
442 3h7a_A Short chain dehydrogena 81.6 1.3 4.3E-05 42.6 4.6 34 277-310 4-38 (252)
443 2qq5_A DHRS1, dehydrogenase/re 81.5 1.8 6E-05 41.4 5.5 33 277-309 2-35 (260)
444 3goh_A Alcohol dehydrogenase, 81.5 1.2 4.2E-05 44.0 4.5 32 279-310 142-173 (315)
445 1ks9_A KPA reductase;, 2-dehyd 81.5 1.4 4.7E-05 42.4 4.8 29 281-309 1-29 (291)
446 2zat_A Dehydrogenase/reductase 81.5 1.8 6.1E-05 41.3 5.6 33 277-309 11-44 (260)
447 3k31_A Enoyl-(acyl-carrier-pro 81.4 1.8 6.1E-05 42.6 5.7 34 277-310 27-63 (296)
448 3fpc_A NADP-dependent alcohol 81.4 2.3 7.9E-05 42.7 6.6 30 279-308 166-196 (352)
449 1kjq_A GART 2, phosphoribosylg 81.3 13 0.00045 37.3 12.3 33 279-311 10-42 (391)
450 3r1i_A Short-chain type dehydr 81.3 1.3 4.6E-05 43.1 4.7 34 277-310 29-63 (276)
451 3h2s_A Putative NADH-flavin re 81.2 1.6 5.5E-05 40.0 5.0 30 281-310 1-31 (224)
452 1xg5_A ARPG836; short chain de 81.1 1.9 6.6E-05 41.5 5.7 33 278-310 30-63 (279)
453 3hja_A GAPDH, glyceraldehyde-3 81.1 1.5 5E-05 45.6 5.1 33 280-312 21-53 (356)
454 2o2s_A Enoyl-acyl carrier redu 81.1 1.8 6E-05 42.9 5.5 34 277-310 6-42 (315)
455 1yxm_A Pecra, peroxisomal tran 81.0 2.3 8E-05 41.3 6.4 34 277-310 15-49 (303)
456 1cf2_P Protein (glyceraldehyde 81.0 1.1 3.9E-05 45.7 4.2 32 281-312 2-34 (337)
457 1o5i_A 3-oxoacyl-(acyl carrier 80.9 1.9 6.5E-05 41.1 5.6 35 276-310 15-50 (249)
458 3nyw_A Putative oxidoreductase 80.9 1.9 6.6E-05 41.2 5.6 33 277-309 4-37 (250)
459 4b4o_A Epimerase family protei 80.9 1.6 5.3E-05 42.4 5.0 31 281-311 1-32 (298)
460 3ftp_A 3-oxoacyl-[acyl-carrier 80.8 1.9 6.6E-05 41.8 5.7 34 277-310 25-59 (270)
461 3vrd_B FCCB subunit, flavocyto 80.7 1.6 5.4E-05 44.2 5.2 41 279-319 1-43 (401)
462 3enk_A UDP-glucose 4-epimerase 80.7 6.6 0.00022 38.3 9.5 32 279-310 4-36 (341)
463 2pnf_A 3-oxoacyl-[acyl-carrier 80.7 2.2 7.6E-05 39.8 5.8 34 277-310 4-38 (248)
464 1xq6_A Unknown protein; struct 80.7 2 6.9E-05 39.8 5.5 33 278-310 2-37 (253)
465 3sx2_A Putative 3-ketoacyl-(ac 80.7 2.6 8.7E-05 40.6 6.4 34 277-310 10-44 (278)
466 2a4k_A 3-oxoacyl-[acyl carrier 80.6 2.3 8E-05 41.0 6.1 46 277-335 3-49 (263)
467 1sby_A Alcohol dehydrogenase; 80.6 2 6.7E-05 40.8 5.5 32 278-309 3-36 (254)
468 3cxt_A Dehydrogenase with diff 80.6 2.4 8.4E-05 41.6 6.4 33 277-309 31-64 (291)
469 3t7c_A Carveol dehydrogenase; 80.5 2.9 9.9E-05 41.0 6.9 35 276-310 24-59 (299)
470 2c29_D Dihydroflavonol 4-reduc 80.5 1.3 4.3E-05 43.7 4.2 32 279-310 4-36 (337)
471 3lvf_P GAPDH 1, glyceraldehyde 80.4 13 0.00045 38.3 11.9 31 281-311 5-36 (338)
472 1qsg_A Enoyl-[acyl-carrier-pro 80.4 1.7 5.9E-05 41.6 5.1 33 278-310 7-42 (265)
473 2p91_A Enoyl-[acyl-carrier-pro 80.3 1.7 5.9E-05 42.2 5.1 33 278-310 19-54 (285)
474 1xq1_A Putative tropinone redu 80.2 2 6.8E-05 40.9 5.4 34 277-310 11-45 (266)
475 2bgk_A Rhizome secoisolaricire 80.2 2.7 9.2E-05 40.1 6.4 33 277-309 13-46 (278)
476 3pxx_A Carveol dehydrogenase; 80.2 2.7 9.2E-05 40.4 6.4 34 277-310 7-41 (287)
477 3ego_A Probable 2-dehydropanto 80.2 2.8 9.4E-05 41.7 6.6 94 281-391 3-104 (307)
478 3v8b_A Putative dehydrogenase, 80.2 2.4 8.2E-05 41.4 6.1 45 278-335 26-71 (283)
479 3uog_A Alcohol dehydrogenase; 80.1 2.2 7.5E-05 43.2 6.0 32 279-310 189-220 (363)
480 1pqw_A Polyketide synthase; ro 80.1 1.2 4.2E-05 40.6 3.7 31 279-309 38-69 (198)
481 2b69_A UDP-glucuronate decarbo 80.1 1.8 6E-05 42.8 5.1 34 277-310 24-58 (343)
482 4a2c_A Galactitol-1-phosphate 80.0 4 0.00014 40.5 7.8 33 279-311 160-192 (346)
483 3grk_A Enoyl-(acyl-carrier-pro 80.0 2.1 7.3E-05 42.0 5.7 33 277-309 28-63 (293)
484 1b7g_O Protein (glyceraldehyde 80.0 1.4 4.9E-05 45.0 4.5 32 281-312 2-34 (340)
485 3v2h_A D-beta-hydroxybutyrate 80.0 3.1 0.00011 40.5 6.8 33 277-309 22-55 (281)
486 1h5q_A NADP-dependent mannitol 79.8 1.7 5.9E-05 41.0 4.8 34 277-310 11-45 (265)
487 2bka_A CC3, TAT-interacting pr 79.8 1.3 4.6E-05 41.2 4.0 33 278-310 16-51 (242)
488 2uvd_A 3-oxoacyl-(acyl-carrier 79.8 2.1 7.3E-05 40.5 5.5 33 278-310 2-35 (246)
489 3dfu_A Uncharacterized protein 79.7 0.78 2.7E-05 44.8 2.4 29 280-308 6-34 (232)
490 2x5o_A UDP-N-acetylmuramoylala 79.7 1.1 3.8E-05 47.0 3.7 35 278-313 3-37 (439)
491 3fi9_A Malate dehydrogenase; s 79.7 2 6.9E-05 44.1 5.6 31 278-308 6-39 (343)
492 3tfo_A Putative 3-oxoacyl-(acy 79.7 2 7E-05 41.7 5.4 32 278-309 2-34 (264)
493 2gdz_A NAD+-dependent 15-hydro 79.6 2.8 9.5E-05 40.1 6.3 32 278-309 5-37 (267)
494 3oz2_A Digeranylgeranylglycero 79.6 1.1 3.6E-05 44.4 3.4 31 281-312 5-35 (397)
495 3nkl_A UDP-D-quinovosamine 4-d 79.6 2 7E-05 37.0 4.8 34 279-312 3-37 (141)
496 2q1w_A Putative nucleotide sug 79.6 1.9 6.4E-05 42.6 5.1 35 277-311 18-53 (333)
497 1lld_A L-lactate dehydrogenase 79.5 4.1 0.00014 40.2 7.6 29 280-308 7-37 (319)
498 2dwc_A PH0318, 433AA long hypo 79.5 11 0.00037 38.9 11.1 32 280-311 19-50 (433)
499 1xkq_A Short-chain reductase f 79.4 2.1 7.3E-05 41.4 5.4 33 277-309 3-36 (280)
500 3uf0_A Short-chain dehydrogena 79.4 2.5 8.4E-05 41.1 5.9 34 277-310 28-62 (273)
No 1
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=8.2e-146 Score=1170.79 Aligned_cols=495 Identities=48% Similarity=0.837 Sum_probs=479.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEE
Q psy1913 37 PDKENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRC 116 (535)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv 116 (535)
+.+++|+||++|+.|||+|+++++++|++|++ .++|+|||.+++++++++|++|+|+|+|+|||+||+|++++|+|||+
T Consensus 2 ~~~~~~~f~~~v~~~~~~a~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~p~r~i~~~vp~~~D~G~~~v~~GyRv 80 (501)
T 3mw9_A 2 DREDDPNFFKMVEGFFDRGASIVEDKLVEDLK-TRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRA 80 (501)
T ss_dssp CSTTCCCHHHHHHHHHHHHHHHHHHHHHHHCC-CTTCSSHHHHHHHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh-ccCChhhhhhhhHHHHHHHhCCCeEEEEEEEEEeCCCCEEEeeeEEE
Confidence 45789999999999999999999999999998 58999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCC
Q psy1913 117 HHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGP 196 (535)
Q Consensus 117 ~H~~~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp 196 (535)
|||+++||+||||||||++|++|+++||+||||||||++||||||||||++||+.+|+.|+||+||+|+++|.++++|||
T Consensus 81 qhn~a~GP~kGGiR~hp~v~l~ev~~La~~MT~KnAl~~LP~GGgKGgi~~DPk~~s~~El~r~~r~f~~eL~~~~~IGp 160 (501)
T 3mw9_A 81 QHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGP 160 (501)
T ss_dssp ECCCSSSSEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHTTSCBT
T ss_pred EECCCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCccCCHHHHHHHHHHHHHHHhhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998789999
Q ss_pred CCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCC
Q psy1913 197 GIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEP 276 (535)
Q Consensus 197 ~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~ 276 (535)
++|||||||||++++|+||+|+|+++.|..+.++++++||||+.+|||.+|.+||||||++++++++++.++++++|+++
T Consensus 161 ~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~ 240 (501)
T 3mw9_A 161 GVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 240 (501)
T ss_dssp TTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCS
T ss_pred CeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCC
Confidence 99999999999999999999999999998766678999999999999999999999999999999999888899999877
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCcccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDK 356 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell~~~ 356 (535)
+|+|+||+||||||||+++|++|++.|+|||+|||++|+||||+| ||+++|.++++++|++.+||+++.+++++|+++
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~G--id~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~ 318 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDG--IDPKELEDFKLQHGTILGFPKAKIYEGSILEVD 318 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTC--CCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCC--CCHHHHHHHHHhcCCeecccCceeecccccccc
Confidence 899999999999999999999999999999999999999999999 999999999999999999999988855899999
Q ss_pred ceEEeeccccccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccccccccccc
Q psy1913 357 VDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMS 436 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~~~grl~ 436 (535)
||||+|||++|+||.+||++|+||+||||||+|+||+|+++|++|||+|+||+++||||||+|||||+||++|++||||+
T Consensus 319 ~DIliPcA~~n~I~~~na~~l~akiV~EgAN~p~T~eA~~iL~~rGIl~~PD~~aNAGGV~vSy~E~~qn~~~~~~grl~ 398 (501)
T 3mw9_A 319 CDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLT 398 (501)
T ss_dssp CSEEEECSSSCCBCTTTGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCSCTTTTT
T ss_pred ceEEeeccccCccCHhHHHHcCceEEEeCCCCcCCHHHHHHHHHCCCEEEChHHhcCchHHhhHHHHHhccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHhhhhhhhhhhhh---hhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Q psy1913 437 FGYDKEISDLLLSSIDTSLSDTFNK---KIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLR 513 (535)
Q Consensus 437 ~~~~~~~~~~~~~~i~~~l~~~~~~---~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR 513 (535)
++|++++++..+++|+++|++.++. .++..|+.+++++++||+|+|+|+++|+++|.++|++|++++++++.++|||
T Consensus 399 ~~~e~~~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~ga~e~d~v~sgL~~~m~~a~~~v~~~a~~~~~~~~lR 478 (501)
T 3mw9_A 399 FKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLR 478 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTTCCCCCCCCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCHH
T ss_pred hhhhcccccccHHHHHHHHHhhhcccccccccCchHHHHHHHcCCcHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 9999999999999999999988665 6777899999999999999999999999999999999999999998668999
Q ss_pred HHHhHHHHHHHHHHHHHcCCC
Q psy1913 514 NAAYCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 514 ~AAy~~ai~rv~~a~~~~G~~ 534 (535)
||||++||+||+++|+.||++
T Consensus 479 tAAy~~ai~rv~~a~~~~G~~ 499 (501)
T 3mw9_A 479 TAAYVNAIEKVFRVYNEAGVT 499 (501)
T ss_dssp HHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHcCcc
Confidence 999999999999999999974
No 2
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=100.00 E-value=2e-124 Score=993.60 Aligned_cols=410 Identities=35% Similarity=0.576 Sum_probs=393.2
Q ss_pred CCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEecC
Q psy1913 41 NPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCT 120 (535)
Q Consensus 41 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H~~ 120 (535)
.+++|++++.||++|+++++ + +++++++|++|+|+++|+|||.||||++++|+|||+|||+
T Consensus 14 ~~~~~~~~~~~~~~a~~~~~--~-----------------~~~~~~~l~~p~r~~~~~vp~~~d~G~~~v~~GyRvqhn~ 74 (424)
T 3k92_A 14 ALNLFLSTQTIIKEALRKLG--Y-----------------PGDMYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHND 74 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--C-----------------CHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHHHcC--C-----------------CHHHHHHhcCCCeEEEEEEEEEecCCcEEEEEEEEEEECC
Confidence 35799999999999999998 4 6799999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCCcc
Q psy1913 121 HKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDV 200 (535)
Q Consensus 121 ~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 200 (535)
++||+||||||||++|++||++||+||||||||++||||||||||++||+.+|+.|+||++|+|+++|.+ +|||++||
T Consensus 75 a~GP~kGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKggi~~DP~~~s~~El~r~~r~f~~~l~~--~iG~~~di 152 (424)
T 3k92_A 75 AVGPTKGGVRFHPEVNEEKVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQ--IVGPTKDI 152 (424)
T ss_dssp SSSSEECCEEEETTCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGG--GCBTTTEE
T ss_pred cCCCCCCCeEecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997 99999999
Q ss_pred cCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCC
Q psy1913 201 PAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCMEN 280 (535)
Q Consensus 201 papDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g 280 (535)
|||||||++++|+||+|+|+++.|.. .++++||||+.+|||.+|.++|||||++++++++ +.+|+ +++|
T Consensus 153 pApDvgt~~~~m~~~~~~y~~~~g~~---~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~------~~~g~--~l~g 221 (424)
T 3k92_A 153 PAPDVYTNSQIMAWMMDEYSRLREFD---SPGFITGKPLVLGGSQGRETATAQGVTICIEEAV------KKKGI--KLQN 221 (424)
T ss_dssp CCBCTTCCHHHHHHHHHHHHHHHTSC---CGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHH------HHTTC--CGGG
T ss_pred cCCcCCCCHHHHHHHHHHHHHHhCCC---CcceeecccccCCCcCCCcccHHHHHHHHHHHHH------HHcCC--Cccc
Confidence 99999999999999999999999974 6799999999999999999999999999999555 46786 5899
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccceE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVDI 359 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~DI 359 (535)
+||+||||||||+++|++|++.|+|||+|||++|+||||+| ||+++|+++++++|++.+|+ ++.+++ ++|+++|||
T Consensus 222 ~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~G--lD~~~l~~~~~~~g~i~~~~-a~~~~~~~i~~~~~DI 298 (424)
T 3k92_A 222 ARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDG--LDIPYLLDKRDSFGMVTNLF-TDVITNEELLEKDCDI 298 (424)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTC--CCHHHHHHHCCSSSCCGGGC-SCCBCHHHHHHSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCC--CCHHHHHHHHHHhCCCCCCC-cEEecCccceeccccE
Confidence 99999999999999999999999999999999999999999 99999999999999999998 777887 899999999
Q ss_pred EeeccccccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhcccccccccccccc
Q psy1913 360 LVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGY 439 (535)
Q Consensus 360 LiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~~~grl~~~~ 439 (535)
|+|||++|+||.+||++|+||+||||||+|+||+|+++|++|||+|+||+++||||||+|||||+||+++++|
T Consensus 299 liPcA~~n~I~~~~a~~l~ak~V~EgAN~p~t~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w------- 371 (424)
T 3k92_A 299 LVPAAISNQITAKNAHNIQASIVVERANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEWVQNNQGYYW------- 371 (424)
T ss_dssp EEECSCSSCBCTTTGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCC-------
T ss_pred EeecCcccccChhhHhhcCceEEEcCCCCCCCHHHHHHHHHCCCEEECchHhcCCCEEeehhHHHhcccccCC-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred chhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHhHH
Q psy1913 440 DKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAAYCS 519 (535)
Q Consensus 440 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~AAy~~ 519 (535)
+++ +|+++|+++|.++|++|++++++++ +++|+|||++
T Consensus 372 ~~e----------------------------------------eV~~~l~~~m~~~~~~v~~~a~~~~--~~~~~aA~~~ 409 (424)
T 3k92_A 372 SEE----------------------------------------EVAEKLRSVMVSSFETIYQTAATHK--VDMRLAAYMT 409 (424)
T ss_dssp CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHT--CCHHHHHHHH
T ss_pred CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHhC--cCHHHHHHHH
Confidence 664 3999999999999999999999996 7999999999
Q ss_pred HHHHHHHHHHHcCCC
Q psy1913 520 ALFKIFKTYEEAGLE 534 (535)
Q Consensus 520 ai~rv~~a~~~~G~~ 534 (535)
|++||++||+.||+|
T Consensus 410 a~~rva~a~~~~G~~ 424 (424)
T 3k92_A 410 GIRKSAEASRFRGWV 424 (424)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999999987
No 3
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=100.00 E-value=2.8e-122 Score=981.85 Aligned_cols=426 Identities=40% Similarity=0.641 Sum_probs=402.1
Q ss_pred CCCCCCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEc
Q psy1913 24 QSGHKIPERLKDVPDKENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRR 103 (535)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~ 103 (535)
.++|++|+++++++.+ |+||++++.+|++|+.+++ + +|+++++|++|+|+++|++||+|
T Consensus 13 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~~l~~P~r~i~~~~p~~~ 71 (440)
T 3aog_A 13 DPNSMKSEPLSYLGKD--GGPWEIFTEQVDRVVPYLG--R-----------------LAPLAESLKRPKRVLIVDVPVRL 71 (440)
T ss_dssp -------CCCGGGTTC--CTHHHHHHHHHHHHGGGCG--G-----------------GGGGGGGGGSCSEEEEEEEEEEC
T ss_pred CcccccchhhhccCCC--CCHHHHHHHHHHHHHHHhC--C-----------------CHHHHHHhcCCCeEEEEEEEEEe
Confidence 4689999999998777 9999999999999999987 3 46789999999999999999999
Q ss_pred CCCceEEeeeeEEEecCCCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHH
Q psy1913 104 DSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRK 183 (535)
Q Consensus 104 d~G~~~~~~gyRv~H~~~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~ 183 (535)
|+|++++|+|||+|||+++||+||||||||++|++||++||+||||||||++||||||||||++||+.+|+.|+||+||+
T Consensus 72 D~G~~~~~~G~rvqhn~a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~Eler~~r~ 151 (440)
T 3aog_A 72 DDGSVAYFEGYRVHHNTARGPAKGGVRYHPEVTLSEVMALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTRR 151 (440)
T ss_dssp TTSCEEEEEEEEEEEECTTSSEECCEEECTTCCHHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHH
T ss_pred cCCCEEEEEEEEEEECCCCCCCcCCeEEEecCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCccCCCCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHH
Q psy1913 184 FALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILV 263 (535)
Q Consensus 184 f~~~L~~~~~iGp~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l 263 (535)
|+++|.+ +|||++||||||+||++++|+||+|+|++..|.. +++++||||+.+|||.+|.++|||||++++++++
T Consensus 152 f~~~l~~--~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~---~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~ 226 (440)
T 3aog_A 152 YTSEIGI--LLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRT---VPGVVTGKPIALGGSLGRRDATGRGVFITAAAAA 226 (440)
T ss_dssp HHHHHGG--GCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSC---CGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHH--hcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCC---CCCeEeccchhhCCCCCCCcchHHHHHHHHHHHH
Confidence 9999997 9999999999999999999999999999999874 6899999999999999999999999999999665
Q ss_pred hcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCC
Q psy1913 264 NNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYP 343 (535)
Q Consensus 264 ~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~ 343 (535)
+.+|+ +++|+||+||||||||+++|++|++.|+|||+|||++|+||||+| ||+++|+++++++|++.+|+
T Consensus 227 ------~~~g~--~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~G--ld~~~l~~~~~~~g~i~~y~ 296 (440)
T 3aog_A 227 ------EKIGL--QVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAG--IDPYDLLRHVQEFGGVRGYP 296 (440)
T ss_dssp ------HHHTC--CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTC--CCHHHHHHHHHHTSSSTTCT
T ss_pred ------HhcCC--CccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCC--CCHHHHHHHHHhcCCcccCC
Confidence 45786 589999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCcccCC-CCccccceEEeeccccccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHh
Q psy1913 344 GTKSAPT-DIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFE 422 (535)
Q Consensus 344 ~a~~i~~-ell~~~~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~E 422 (535)
+++.+++ ++|+.+||||+|||++|+||.+||++|+||+||||||+|+||+|+++|++|||+|+||+++|||||++||||
T Consensus 297 ~a~~i~~~ei~~~~~DIlvPcA~~n~i~~~na~~l~ak~VvEgAN~p~t~eA~~iL~~~GI~~~PD~~aNaGGV~vS~~E 376 (440)
T 3aog_A 297 KAEPLPAADFWGLPVEFLVPAALEKQITEQNAWRIRARIVAEGANGPTTPAADDILLEKGVLVVPDVIANAGGVTVSYFE 376 (440)
T ss_dssp TSEECCHHHHTTCCCSEEEECSSSSCBCTTTGGGCCCSEEECCSSSCBCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHH
T ss_pred CceEcCchhhhcCCCcEEEecCCcCccchhhHHHcCCcEEEecCccccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEE
Confidence 9988877 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHH
Q psy1913 423 WLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEY 502 (535)
Q Consensus 423 w~qn~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~ 502 (535)
|+||+++++| +++ +|+++|+++|.++|++++++
T Consensus 377 ~~qN~~~~~w-------~~e----------------------------------------ev~~~l~~im~~~~~~v~~~ 409 (440)
T 3aog_A 377 WVQDFNSYFW-------TEE----------------------------------------EINARLERVLRNAFEAVWQV 409 (440)
T ss_dssp HHHHTTTCCC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCccCcC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 9999998755 664 38999999999999999999
Q ss_pred HHHcCCCCCHHHHHhHHHHHHHHHHHHHcCCC
Q psy1913 503 AEKSDNKLDLRNAAYCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 503 a~~~~~~~~lR~AAy~~ai~rv~~a~~~~G~~ 534 (535)
|++++ +++|+|||++|++||++||+.||+|
T Consensus 410 a~~~~--~~~~~aA~~~a~~rva~a~~~~G~~ 439 (440)
T 3aog_A 410 AQEKK--IPLRTAAYVVAATRVLEARALRGLY 439 (440)
T ss_dssp HHHHT--CCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHC--cCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99995 7999999999999999999999987
No 4
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=100.00 E-value=3e-121 Score=973.53 Aligned_cols=416 Identities=27% Similarity=0.386 Sum_probs=386.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEe
Q psy1913 39 KENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHH 118 (535)
Q Consensus 39 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H 118 (535)
..+|.|++.+..+|+.++.+++ + .+.+.+++++|++|+|+++|+|||.||+|++++|+||||||
T Consensus 28 ~~~~ef~qa~~e~~~~~~~~~~--~--------------~p~~~~~~~~l~~P~r~i~~~vp~~~D~G~~~v~~GyRvqh 91 (456)
T 3r3j_A 28 KNEPEFLQAFEEVLSCLKPVFK--K--------------DNVYIGVLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQY 91 (456)
T ss_dssp TTCHHHHHHHHHHHHHTHHHHH--H--------------CTHHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CCCCcHHHHHHHHHHHHHHHHh--h--------------ChHhhHHHHhccCCceEEEEEEEEEeCCCcEEEEEEEEEEE
Confidence 4568999999999999999986 2 01123679999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCC
Q psy1913 119 CTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGI 198 (535)
Q Consensus 119 ~~~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~ 198 (535)
|+++||+||||||||++|++|+++||+||||||||++||||||||||++||+.+|+.|+||++|+|+.+|.+ ||||++
T Consensus 92 n~a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~s~~el~r~~r~f~~eL~~--~iGp~~ 169 (456)
T 3r3j_A 92 NSVLGPYKGGLRFHPAVNLSVIKFLGFEQIFKNSLTTLPMGGGKGGSDFDPKGKSENEILKFCQSFMTNLFR--YIGPNT 169 (456)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSCCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGG--GCBTTT
T ss_pred CCcCCCccCceEecCCCCHHHHHHHHHHHHHHHHhcCCCCCcceeEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986 999999
Q ss_pred cccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCC
Q psy1913 199 DVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCM 278 (535)
Q Consensus 199 dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l 278 (535)
|||||||||++++|+||+|+|++..+. .++++||||+.+|||.+|.+||||||+++++++++ .+|. ++
T Consensus 170 DvpApDvGt~~~em~w~~~~y~~~~~~----~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~------~~g~--~l 237 (456)
T 3r3j_A 170 DVPAGDIGVGGREIGYLFGQYKKLKNS----FEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLK------DLND--NL 237 (456)
T ss_dssp EEEECBTTBCHHHHHHHHHHHHHHHTS----CCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHH------TTTC--CS
T ss_pred CcCCCCCCCCHHHHHHHHHHHHhhcCc----ccceecCCcccccCCCCCCcccchHHHHHHHHHHH------HcCC--Cc
Confidence 999999999999999999999988754 57999999999999999999999999999996665 4565 58
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHH---HHHc-CCcccC----CCCcccCC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTY---KITK-GTIKGY----PGTKSAPT 350 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~---~~~~-g~v~~~----~~a~~i~~ 350 (535)
+|+||+||||||||+++|++|++.|+|||+|||++|+||||+| ||+++|..+ ++++ +++.+| ++++.+++
T Consensus 238 ~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~G--ld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~ 315 (456)
T 3r3j_A 238 ENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNG--FTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFEN 315 (456)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTC--CCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCC--CCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCC
Confidence 9999999999999999999999999999999999999999999 999999865 4443 456654 78888888
Q ss_pred -CCccccceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhc
Q psy1913 351 -DIMFDKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426 (535)
Q Consensus 351 -ell~~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn 426 (535)
++|+++||||+|||++|+||.+||++| +||+||||||+|+||+|+++|++|||+|+||+++||||||+|||||+||
T Consensus 316 ~~i~~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn 395 (456)
T 3r3j_A 316 QKPWNIPCDIAFPCATQNEINENDADLFIQNKCKMIVEGANMPTHIKALHKLKQNNIILCPSKAANAGGVAVSGLEMSQN 395 (456)
T ss_dssp CCGGGSCCSEEEECSCTTCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHHHHHTTTCEEECHHHHTTHHHHHHHHHHHHH
T ss_pred ccccccCccEEEeCCCccchhhHHHHHHHhcCCeEEEecCCCCCCHHHHHHHHHCCCEEeChHHhcCCceeeehHHHhhc
Confidence 999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy1913 427 ISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKS 506 (535)
Q Consensus 427 ~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~ 506 (535)
+++++| +++ +|+++|+++|.++|++++++++++
T Consensus 396 ~~~~~w-------~~e----------------------------------------eV~~~L~~im~~~~~~~~~~a~~~ 428 (456)
T 3r3j_A 396 SMRLQW-------THQ----------------------------------------ETDMKLQNIMKSIYEQCHNTSKIY 428 (456)
T ss_dssp HHTCCC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 998755 664 399999999999999999999999
Q ss_pred CCCCCHHHHHhHHHHHHHHHHHHHcCC
Q psy1913 507 DNKLDLRNAAYCSALFKIFKTYEEAGL 533 (535)
Q Consensus 507 ~~~~~lR~AAy~~ai~rv~~a~~~~G~ 533 (535)
+...|||+|||++||+||++||+.||+
T Consensus 429 ~~~~~~r~aA~i~~~~rva~a~~~~G~ 455 (456)
T 3r3j_A 429 LNESDLVAGANIAGFLKVADSFLEQGG 455 (456)
T ss_dssp HSSCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHhccHHHHHHHHHHHHhcCC
Confidence 744599999999999999999999996
No 5
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-119 Score=955.19 Aligned_cols=410 Identities=31% Similarity=0.516 Sum_probs=390.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEE
Q psy1913 38 DKENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCH 117 (535)
Q Consensus 38 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~ 117 (535)
...+++||++++.+|++|+.+++ + +|+++++|++|+|+++|++||+||+|++++|+|||+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~ 68 (419)
T 3aoe_E 8 PPEDPGLWDTYLEWLERALKVAG--V-----------------HPTTLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVV 68 (419)
T ss_dssp CSSCCHHHHHHHHHHHHHHTTSC--C-----------------CHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHhC--C-----------------CHHHHhhcCCCCeEEEEEEEEEecCCCEEEEEEEEEE
Confidence 35567899999999999999987 3 4679999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCC
Q psy1913 118 HCTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPG 197 (535)
Q Consensus 118 H~~~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~ 197 (535)
||+++||+||||||||++|++||++||+||||||||++||||||||||++||+.+|+.|+||++|+|+++|.+ +|||+
T Consensus 69 hn~~~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~El~r~~r~f~~~l~~--~iGp~ 146 (419)
T 3aoe_E 69 HDIARGPAKGGVRLDPGVTLGQTAGLAAWMTLKAAVYDLPFGGAAGGIAVDPKGLSPQELERLVRRYTAELVG--LIGPD 146 (419)
T ss_dssp EECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHTT--TCBTT
T ss_pred ECCCCCCCcCCeEecCCCCHHHHHHHHHHHHHHHHhccCCCCCccEEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred CcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCC
Q psy1913 198 IDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPC 277 (535)
Q Consensus 198 ~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~ 277 (535)
+||||||+||++++|+||+|+|++..|+. +++++||||+.+|||.+|.++|||||++++++++ +.+|+ +
T Consensus 147 ~dvpA~DvGt~~~~m~~~~~~y~~~~~~~---~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~------~~~g~--~ 215 (419)
T 3aoe_E 147 SDILGPDLGADQQVMAWIMDTYSMTVGST---VPGVVTGKPHALGGSEGRDDAAGLGALLVLEALA------KRRGL--D 215 (419)
T ss_dssp TEEEEEBTTBCHHHHHHHHHHHHHHHTSC---CGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHH------HHHTC--C
T ss_pred CEEECCCCCCCHHHHHHHHHHHHHhhCCC---CCCeeeccchhcCCCCCCccchHHHHHHHHHHHH------HhcCC--C
Confidence 99999999999999999999999998874 6899999999999999999999999999999665 45786 5
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCcccc
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDK 356 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~ 356 (535)
++|+||+||||||||+++|++|++.|+|||+|||++|+||||+| ||+++|.+++++++++.+| .+++ ++|.++
T Consensus 216 l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~G--ld~~~l~~~~~~~g~v~~~----~~~~~e~~~~~ 289 (419)
T 3aoe_E 216 LRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEG--LDVAEVLSAYEATGSLPRL----DLAPEEVFGLE 289 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTC--CCHHHHHHHHHHHSSCSCC----CBCTTTGGGSS
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCC--CCHHHHHHHHHhhCCccee----eccchhhhccC
Confidence 89999999999999999999999999999999999999999999 9999999999999999888 4566 899999
Q ss_pred ceEEeeccccccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccccccccccc
Q psy1913 357 VDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMS 436 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~~~grl~ 436 (535)
||||+|||++|+||.+||++++||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|
T Consensus 290 ~DVliP~A~~n~i~~~~A~~l~ak~V~EgAN~p~t~~A~~~L~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w---- 365 (419)
T 3aoe_E 290 AEVLVLAAREGALDGDRARQVQAQAVVEVANFGLNPEAEAYLLGKGALVVPDLLSGGGGLLASYLEWVQDLNMFFW---- 365 (419)
T ss_dssp CSEEEECSCTTCBCHHHHTTCCCSEEEECSTTCBCHHHHHHHHHHTCEEECHHHHTCHHHHHHHHHHHHHHHTCCC----
T ss_pred ceEEEecccccccccchHhhCCceEEEECCCCcCCHHHHHHHHHCCCEEECHHHHhCCCchhhHHHHhhcccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred cccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Q psy1913 437 FGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAA 516 (535)
Q Consensus 437 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~AA 516 (535)
+++ +|+++|+++|.++|++|+++|++++ +|+|+||
T Consensus 366 ---~~e----------------------------------------ev~~~l~~im~~~~~~v~~~a~~~~--~~~~~aA 400 (419)
T 3aoe_E 366 ---SPE----------------------------------------EVRERFETRVARVVDAVCRRAERGG--LDLRMGA 400 (419)
T ss_dssp ---CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHT--CCHHHHH
T ss_pred ---CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHC--cCHHHHH
Confidence 664 3899999999999999999999995 7999999
Q ss_pred hHHHHHHHHHHHHHcCCC
Q psy1913 517 YCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 517 y~~ai~rv~~a~~~~G~~ 534 (535)
|++|++||+++|+.||+|
T Consensus 401 ~~~a~~rv~~a~~~~G~~ 418 (419)
T 3aoe_E 401 LALALERLDEATRLRGVY 418 (419)
T ss_dssp HHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 999999999999999987
No 6
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=100.00 E-value=3.5e-119 Score=961.56 Aligned_cols=417 Identities=26% Similarity=0.360 Sum_probs=388.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEe
Q psy1913 39 KENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHH 118 (535)
Q Consensus 39 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H 118 (535)
..+|.|+++++.+|++|+.+++ + .|+ +.+++++|++|+|+++|++||.+|+|++++|+|||+||
T Consensus 41 ~~~~e~~~~~~~~~~~~~~~~~--~---------~p~-----~~~~le~l~~Per~i~~~vp~~~D~G~v~v~~Gyrvqh 104 (470)
T 2bma_A 41 PNQVEFLQAFHEILYSLKPLFM--E---------EPK-----YLPIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQY 104 (470)
T ss_dssp TTCHHHHHHHHHHHHHTHHHHH--H---------CTT-----HHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CCCchHHHHHHHHHHHHHHHhc--c---------Chh-----hhHHHHHhcCCceEEEEEEEEEeCCCCEEEEEEEEEEE
Confidence 4569999999999999999986 2 011 11799999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCC
Q psy1913 119 CTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGI 198 (535)
Q Consensus 119 ~~~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~ 198 (535)
|+++||+||||||||+++++|+++||+||||||||++||||||||||.+||+.+|+.|+||++|+|+++|.+ +|||+.
T Consensus 105 n~a~GPakGGiR~hp~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~S~~El~r~~r~f~~~L~~--~iGp~~ 182 (470)
T 2bma_A 105 NSALGPYKGGLRFHPSVNLSIVKFLGFEQIFKNSLTGLSMGGGKGGSDFDPKGKSDNEILKFCQAFMNELYR--HIGPCT 182 (470)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTCSSCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHGG--GCBTTT
T ss_pred CCCCCCCCCCeEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCcCCHHHHHHHHHHHHHHhhh--ccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996 899999
Q ss_pred cccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCC
Q psy1913 199 DVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCM 278 (535)
Q Consensus 199 dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l 278 (535)
|||||||||++++|+||+++|++..++. .+++||||+.+|||.+|.++|||||+++++++++ .+|. ++
T Consensus 183 DvpApDvGt~~~em~~~~~~y~~~~~~~----~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l~------~~G~--~l 250 (470)
T 2bma_A 183 DVPAGDIGVGGREIGYLYGQYKKIVNSF----NGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLK------SLNI--PV 250 (470)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHHCCC----SCSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHH------TTTC--CG
T ss_pred CccCCCCCCChHHHHHHHHHHHHhcCCc----ccEEeCCCccCCCCCCccccchHHHHHHHHHHHH------hccC--Cc
Confidence 9999999999999999999999988874 3899999999999999999999999999996665 4674 68
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCC---CHHHHHHHHHHc-CCcccCC----CCcccCC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEI---NYKDLHTYKITK-GTIKGYP----GTKSAPT 350 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dL---Di~~L~~~~~~~-g~v~~~~----~a~~i~~ 350 (535)
+|+||+||||||||+++|++|++.|+|||+|||++|+||||+| | |++.|+++++++ |++.+|+ +++.+++
T Consensus 251 ~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~G--id~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~ 328 (470)
T 2bma_A 251 EKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNG--FTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPN 328 (470)
T ss_dssp GGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSC--CCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCC--CCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecC
Confidence 9999999999999999999999999999999999999999999 9 666677777765 7888874 6788887
Q ss_pred -CCccccceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhc
Q psy1913 351 -DIMFDKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426 (535)
Q Consensus 351 -ell~~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn 426 (535)
++|+++||||+|||++|+||.+||++| +||+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||
T Consensus 329 ~~~~~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~~L~~rGIl~~PD~~aNAGGV~~S~~E~~qn 408 (470)
T 2bma_A 329 EKPWGVPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLEMSQN 408 (470)
T ss_dssp CCTTSSCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHH
T ss_pred cCeeecCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHHHHHHCCcEEEChHHhhCCCceeeHHHhhcc
Confidence 899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy1913 427 ISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKS 506 (535)
Q Consensus 427 ~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~ 506 (535)
+++++| +++ +|+++|+++|.++|++++++++++
T Consensus 409 ~~~~~w-------~~e----------------------------------------ev~~~L~~im~~~~~~~~~~a~~~ 441 (470)
T 2bma_A 409 FQFSHW-------TRE----------------------------------------TVDEKLKEIMRNIFIACSENALKY 441 (470)
T ss_dssp HTTCCC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 998755 653 299999999999999999999999
Q ss_pred CCCC-CHHHHHhHHHHHHHHHHHHHcCCC
Q psy1913 507 DNKL-DLRNAAYCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 507 ~~~~-~lR~AAy~~ai~rv~~a~~~~G~~ 534 (535)
+.+. |||+|||++||+||++||+.||+|
T Consensus 442 ~~~~~~~r~~A~i~~~~rva~am~~~G~~ 470 (470)
T 2bma_A 442 TKNKYDLQAGANIAGFLKVAESYIEQGCF 470 (470)
T ss_dssp HSCSSCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7433 999999999999999999999986
No 7
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=100.00 E-value=1e-118 Score=952.08 Aligned_cols=411 Identities=36% Similarity=0.610 Sum_probs=373.6
Q ss_pred CCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEecCC
Q psy1913 42 PGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCTH 121 (535)
Q Consensus 42 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H~~~ 121 (535)
.+||++++.+|++|+.+++ + +|+++++|++|+|+++|++||+||+|++++|+|||+|||++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~~l~~p~r~i~~~~p~~~d~G~~~~~~g~rv~hn~~ 65 (421)
T 2yfq_A 5 LNPLVAAQEKVRIACEKLG--C-----------------DPAVYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSA 65 (421)
T ss_dssp -CHHHHHHHHHHHHHHHHT--C-----------------CHHHHHHHSSCSEEEEEEEEEEETTTEEEEEEEEEEECCCS
T ss_pred cCHHHHHHHHHHHHHHHhC--C-----------------CHHHHhhccCCceEEEEEEEEEecCCCEEEEEEEEEEECCC
Confidence 4799999999999999987 3 46899999999999999999999999999999999999999
Q ss_pred CCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCCccc
Q psy1913 122 KSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDVP 201 (535)
Q Consensus 122 ~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~dip 201 (535)
+||+||||||||++|++||++||+||||||||++||||||||||++||+.+|+.|+||++|+|+++|.+ +|||++|||
T Consensus 66 ~GP~kGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKggi~~dP~~~s~~el~r~~r~f~~~l~~--~iG~~~dvp 143 (421)
T 2yfq_A 66 VGPSKGGVRFHPNVNMDEVKALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYK--YLGDRIDIP 143 (421)
T ss_dssp SSSEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGG--GCBTTTEEE
T ss_pred CCCCcCCEEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 999999999
Q ss_pred CCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCc
Q psy1913 202 APDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCMENK 281 (535)
Q Consensus 202 apDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~ 281 (535)
|||+||++++|+||+|+|++..|++ ..++++||||+.+|||.+|.++|||||++++++++ +.+|+ +++|+
T Consensus 144 A~Dvgt~~~~m~~~~~~y~~~~~~~--~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~------~~~g~--~l~g~ 213 (421)
T 2yfq_A 144 APDVNTNGQIMSWFVDEYVKLNGER--MDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESA------KRFGI--KMEDA 213 (421)
T ss_dssp EECTTCCHHHHHHHHHHHHHHTTTC--CCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHH------HHTTC--CGGGS
T ss_pred CCCCCCCHHHHHHHHHHHHHhhCCC--CCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHH------HhcCC--CccCC
Confidence 9999999999999999999988863 14699999999999999999999999999999655 45786 58999
Q ss_pred EEEEEccccHHHHHHHHHHHCCCeEEEEecCC-----ceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 282 TYIVQGFGNVGFHAARYFRRGRAKCLAIVEHD-----TAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 282 ~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~-----G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
||+||||||||+++|++|++.|+|||+|||++ |+||||+| ||+++|.++++++|++.+|++++.+++ ++|++
T Consensus 214 ~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~G--ld~~~l~~~~~~~g~i~~~~~a~~i~~~~~~~~ 291 (421)
T 2yfq_A 214 KIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENG--IDFKELLAYKEANKTLIGFPGAERITDEEFWTK 291 (421)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSC--CCHHHHHHHHHHHCC------------------
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCC--CCHHHHHHHHHhcCCcccCCCceEeCccchhcC
Confidence 99999999999999999999999999999999 99999999 999999999999999999999998888 89999
Q ss_pred cceEEeeccccccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhcccccccccc
Q psy1913 356 KVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRM 435 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~~~grl 435 (535)
+||||+|||++|+||.+||.+++||+||||||+|+||+|+++|++|||+|+||+++|+|||++|||||+||+++++|
T Consensus 292 ~~DIliP~A~~n~i~~~~A~~l~ak~VvEgAN~P~t~ea~~il~~~GI~~~Pd~~aNaGGV~vS~~E~~qN~~~~~w--- 368 (421)
T 2yfq_A 292 EYDIIVPAALENVITGERAKTINAKLVCEAANGPTTPEGDKVLTERGINLTPDILTNSGGVLVSYYEWVQNQYGYYW--- 368 (421)
T ss_dssp ---CEEECSCSSCSCHHHHTTCCCSEEECCSSSCSCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHHHTCCC---
T ss_pred CccEEEEcCCcCcCCcccHHHcCCeEEEeCCccccCHHHHHHHHHCCCEEEChHHHhCCCeEEEEEEEEecCccCcC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred ccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Q psy1913 436 SFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNA 515 (535)
Q Consensus 436 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~A 515 (535)
+++ +|.++|+++|.++|+++++.|++++ +|+|+|
T Consensus 369 ----~~e----------------------------------------~V~~~l~~~m~~~~~~v~~~A~~~g--~~~~~a 402 (421)
T 2yfq_A 369 ----TEA----------------------------------------EVEEKQEADMMKAIKGVFAVADEYN--VTLREA 402 (421)
T ss_dssp ----CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHTT--CCHHHH
T ss_pred ----CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHC--cCHHHH
Confidence 664 3899999999999999999999995 799999
Q ss_pred HhHHHHHHHHHHHHHcCCC
Q psy1913 516 AYCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 516 Ay~~ai~rv~~a~~~~G~~ 534 (535)
||++|++||+++|+.||+|
T Consensus 403 A~~~a~~rv~~a~~~~G~~ 421 (421)
T 2yfq_A 403 VYMYAIKSIDVAMKLRGWY 421 (421)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999986
No 8
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=100.00 E-value=1.6e-117 Score=945.38 Aligned_cols=417 Identities=24% Similarity=0.331 Sum_probs=380.3
Q ss_pred CCCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEec
Q psy1913 40 ENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHC 119 (535)
Q Consensus 40 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H~ 119 (535)
.+|.|++.+...++.-..+++. .| ......++++|++|+|+|+|++||.||+|++++|+|||||||
T Consensus 23 ~~~ef~qa~~e~~~~l~~~~~~-----~p---------~y~~~~~~e~l~~PeR~i~~~vp~~~D~G~~~v~~GyRvqhn 88 (450)
T 4fcc_A 23 NQTEFAQAVREVMTTLWPFLEQ-----NP---------KYRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFS 88 (450)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHH-----CG---------GGTSTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CChHHHHHHHHHHHHHHHHHHh-----Ch---------hhhhhhHHHHHhCCceEEEEEEEEEECCCcEEEEEEEEEEEC
Confidence 3567888888877766555531 11 111357899999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCCc
Q psy1913 120 THKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGID 199 (535)
Q Consensus 120 ~~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~d 199 (535)
+++||+||||||||++|++||++||+||||||||++||||||||||++||+.+|+.|+||++|+|+.+|.+ +|||+.|
T Consensus 89 ~alGP~kGG~Rfhp~v~l~ev~~La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~--~iG~d~d 166 (450)
T 4fcc_A 89 SAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYR--HLGADTD 166 (450)
T ss_dssp CSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGG--GCBTTTE
T ss_pred CCCCCCCCceEecCCCCHHHHHHHHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhh--eecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996 8999999
Q ss_pred ccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCC
Q psy1913 200 VPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCME 279 (535)
Q Consensus 200 ipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~ 279 (535)
||||||||++++|+||+++|+++.+. .++++||||+.+|||.+|.+||||||++++++++ +.+|. +++
T Consensus 167 vpa~Dig~~~~em~~~~~~y~~~~~~----~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~------~~~~~--~l~ 234 (450)
T 4fcc_A 167 VPAGDIGVGGREVGFMAGMMKKLSNN----TACVFTGKGLSFGGSLIRPEATGYGLVYFTEAML------KRHGM--GFE 234 (450)
T ss_dssp EEECBTTBCHHHHHHHHHHHHHHHTC----CSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHH------HHTTC--CST
T ss_pred CCccceeecchhhhhhhhhhhhccCC----CceeecCCCcccCCCCCCCCceeeeHHHHHHHHH------HHcCC--CcC
Confidence 99999999999999999999998764 4789999999999999999999999999999665 45665 589
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc----CCcccCC---CCcccCC-C
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK----GTIKGYP---GTKSAPT-D 351 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~----g~v~~~~---~a~~i~~-e 351 (535)
|+||+||||||||+++|++|++.|+|||+|||++|+||||+| ||+++|.++++.+ +.+..|+ +++.+++ +
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~G--id~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~~~~ 312 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESG--FTKEKLARLIEIKSSRDGRVADYAKEFGLVYLEGQQ 312 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTC--CCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEETCC
T ss_pred CCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCC--CCHHHHHHHHHHhcccCCccccccccCCcEEecCcc
Confidence 999999999999999999999999999999999999999999 9999999887644 3444443 5677788 9
Q ss_pred CccccceEEeeccccccccccccccccc---eEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccc
Q psy1913 352 IMFDKVDILVPAAIEKVIRKSNADKVQA---KIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428 (535)
Q Consensus 352 ll~~~~DILiPaA~~~~It~~na~~i~A---kiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~ 428 (535)
+|+++||||+|||++|+||.+||++|+| |+|+||||+|+||||+++|++|||+|+||+++||||||+|||||+||++
T Consensus 313 i~~~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~iL~~rGIl~~PD~~aNAGGVi~S~~E~~qn~~ 392 (450)
T 4fcc_A 313 PWSVPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAA 392 (450)
T ss_dssp GGGSCCSEEEECSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHH
T ss_pred cccCCccEEeeccccccccHHHHHHHHhcCceEEecCCCCCCCHHHHHHHHHCCCEEEChHHhcCccHhhhHHHHhhhcc
Confidence 9999999999999999999999999985 9999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q psy1913 429 HSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDN 508 (535)
Q Consensus 429 ~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~ 508 (535)
+++| ++| +|+++|+++|.++|+++++++++..
T Consensus 393 ~~~w-------~~e----------------------------------------eV~~kL~~im~~~~~~~~~~~~e~~- 424 (450)
T 4fcc_A 393 RLGW-------KAE----------------------------------------KVDARLHHIMLDIHHACVEHGGEGE- 424 (450)
T ss_dssp TCCC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHTSCSSS-
T ss_pred cCCC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 8755 664 2999999999999999999987754
Q ss_pred CCCHHHHHhHHHHHHHHHHHHHcCCC
Q psy1913 509 KLDLRNAAYCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 509 ~~~lR~AAy~~ai~rv~~a~~~~G~~ 534 (535)
.+|||+|||++|++||++||+.||+.
T Consensus 425 ~~~~~~aA~i~a~~rVa~Am~~~G~v 450 (450)
T 4fcc_A 425 QTNYVQGANIAGFVKVADAMLAQGVI 450 (450)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 58999999999999999999999973
No 9
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=100.00 E-value=7.4e-117 Score=935.89 Aligned_cols=411 Identities=41% Similarity=0.689 Sum_probs=390.5
Q ss_pred CCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEecC
Q psy1913 41 NPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCT 120 (535)
Q Consensus 41 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H~~ 120 (535)
+++||++++.+|++|+.+++ + +++++++|++|+|+++|++||+||+|++++|+|||+|||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~~~~ 62 (415)
T 2tmg_A 2 EKSLYEMAVEQFNRAASLMD--L-----------------ESDLAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNV 62 (415)
T ss_dssp --CHHHHHHHHHHHHHHHTT--C-----------------CHHHHHHHHSCSEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHhC--C-----------------CHHHHHhcCCCCeEEEEEEEEEecCCcEEEEEEEEEEECC
Confidence 47899999999999999987 3 4678999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCCcc
Q psy1913 121 HKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDV 200 (535)
Q Consensus 121 ~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 200 (535)
++||+||||||||+++++||++||++|||||||++||||||||||.+||+.+|+.|+||++|+|+++|.+ +|||++||
T Consensus 63 ~~GpakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~--~ig~~~dv 140 (415)
T 2tmg_A 63 ARGPAKGGIRYHPDVTLDEVKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRRELERLSRRFFREIQV--IIGPYNDI 140 (415)
T ss_dssp TTSSEECCEEEESSCCHHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHTGG--GCBTTTEE
T ss_pred CCCCCCCcEEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHH--HhCCCcEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997 99999999
Q ss_pred cCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCC
Q psy1913 201 PAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCMEN 280 (535)
Q Consensus 201 papDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g 280 (535)
||||+||++++|+||+++|++..|+. .++++||||+.+|||.+|.++|||||++++++++ +.+|+ +++|
T Consensus 141 pa~D~gt~~~~m~~~~~~y~~~~~~~---~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~------~~~g~--~l~g 209 (415)
T 2tmg_A 141 PAPDVNTNADVIAWYMDEYEMNVGHT---VLGIVTGKPVELGGSKGREEATGRGVKVCAGLAM------DVLGI--DPKK 209 (415)
T ss_dssp CCBCTTCCHHHHHHHHHHHHHHHSSC---CCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHH------HHTTC--CTTT
T ss_pred eCCCCCCCHHHHHHHHHHHHHhhCCC---CCCeEecCchhhCCCCCcCcchHHHHHHHHHHHH------HHcCC--CcCC
Confidence 99999999999999999999999875 6799999999999999999999999999999555 45786 5899
Q ss_pred cEEEEEccccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~D 358 (535)
+||+||||||||+++|++|++ .|+|||+|||++|++|||+| ||+++|.+++++++++.+|++++.+++ ++|+.+||
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~G--ld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~~~~D 287 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEG--FDVEELIRYKKEHGTVVTYPKGERITNEELLELDVD 287 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTC--CCHHHHHHHHHHSSCSTTCSSSEEECHHHHTTCSCS
T ss_pred CEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCC--CCHHHHHHHHHhhCCcccCCCceEcCchhhhcCCCc
Confidence 999999999999999999999 99999999999999999999 999999999999999999999988877 89999999
Q ss_pred EEeeccccccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccccccccccccc
Q psy1913 359 ILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFG 438 (535)
Q Consensus 359 ILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~~~grl~~~ 438 (535)
||+|||++|+||++||++++||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|
T Consensus 288 IliP~A~~n~i~~~~a~~l~ak~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~s~~E~vqN~~~~~w------ 361 (415)
T 2tmg_A 288 ILVPAALEGAIHAGNAERIKAKAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVSYFEWVQDLQSFFW------ 361 (415)
T ss_dssp EEEECSSTTSBCHHHHTTCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTCHHHHHHHHHHHHHHTTCCC------
T ss_pred EEEecCCcCccCcccHHHcCCeEEEeCCCcccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccccC------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred cchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHhH
Q psy1913 439 YDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAAYC 518 (535)
Q Consensus 439 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~AAy~ 518 (535)
+++ +|+++|+++|.++|+++++.|++++ +++|+|||+
T Consensus 362 -~~e----------------------------------------~v~~~l~~~m~~~~~~v~~~A~~~g--~~~~~aA~~ 398 (415)
T 2tmg_A 362 -DLD----------------------------------------QVRNALEKMMKGAFNDVMKVKEKYN--VDMRTAAYI 398 (415)
T ss_dssp -CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHT--CCHHHHHHH
T ss_pred -CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHC--cCHHHHHHH
Confidence 663 3899999999999999999999996 799999999
Q ss_pred HHHHHHHHHHHHcCCC
Q psy1913 519 SALFKIFKTYEEAGLE 534 (535)
Q Consensus 519 ~ai~rv~~a~~~~G~~ 534 (535)
+|++||++||+.||+|
T Consensus 399 ~a~~rv~~a~~~~G~~ 414 (415)
T 2tmg_A 399 LAIDRVAYATKKRGIY 414 (415)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhcCCC
Confidence 9999999999999986
No 10
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=1.8e-117 Score=941.64 Aligned_cols=411 Identities=36% Similarity=0.573 Sum_probs=391.3
Q ss_pred CCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEecC
Q psy1913 41 NPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCT 120 (535)
Q Consensus 41 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H~~ 120 (535)
.++||++++.+|++++.+++ + +|+++++|++|+|+++|++||+||+|++++|+|||+|||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~~l~~P~r~i~v~~p~~~D~G~~~~~~G~rv~~~~ 63 (421)
T 1v9l_A 3 RTGFLEYVLNYVKKGVELGG--F-----------------PEDFYKILSRPRRVLIVNIPVRLDGGGFEVFEGYRVQHCD 63 (421)
T ss_dssp -CHHHHHHHHHHHHHHHHTT--C-----------------CHHHHHHHHSCSEEEEEEEEEECSSSCEEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHhC--C-----------------CHHHHHhccCCceEEEEEEEEEecCCcEEEEEEEEeecCC
Confidence 35899999999999999987 3 5689999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCCcc
Q psy1913 121 HKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDV 200 (535)
Q Consensus 121 ~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 200 (535)
++||+||||||||+++++||++||++|||||||++||||||||||.+||+.+|+.|+||++|+|+++|.+ +|||++||
T Consensus 64 ~~GpakGG~R~~p~v~~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~--~iG~~~dv 141 (421)
T 1v9l_A 64 VLGPYKGGVRFHPEVTLADDVALAILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAP--LIGDVVDI 141 (421)
T ss_dssp SSSSEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTCSCCEEEEEECSCGGGSCHHHHHHHHHHHHHHHGG--GCBTTTEE
T ss_pred cCCCccccEEecCCCCHHHHHHHHHHHHHHHHhhCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHH--hcCCCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997 99999999
Q ss_pred cCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCC
Q psy1913 201 PAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCMEN 280 (535)
Q Consensus 201 papDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g 280 (535)
||||+||++++|+||+++|++..|+. .++++||||+.+|||.+|.++|||||+++++++++ .+|+ +++|
T Consensus 142 pA~D~Gt~~~~m~~~~~~y~~~~~~~---~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~------~~g~--~l~g 210 (421)
T 1v9l_A 142 PAPDVGTNAQIMAWMVDEYSKIKGYN---VPGVFTSKPPELWGNPVREYATGFGVAVATREMAK------KLWG--GIEG 210 (421)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHTSC---CGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHH------HHHS--CCTT
T ss_pred eCCCCCCCHHHHHHHHHHHHHHhCCC---CCCeEeccchhhCCCCCcccchHHHHHHHHHHHHH------hcCC--CcCC
Confidence 99999999999999999999999875 68999999999999999999999999999996654 5775 5899
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCC---ccc-CC-CCc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGT---KSA-PT-DIM 353 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a---~~i-~~-ell 353 (535)
+||+||||||||+++|++|++.|+|||+|||++|++|||+| ||+++|.++++++++ +.+|+++ +.+ ++ ++|
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~G--lD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~~ 288 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEG--LNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIF 288 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTC--CCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCC--CCHHHHHHHHHhhCCccccccccccCceEeCCchhhh
Confidence 99999999999999999999999999999999999999999 999999999998888 8888876 777 77 899
Q ss_pred cccceEEeeccccccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhcccccccc
Q psy1913 354 FDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLG 433 (535)
Q Consensus 354 ~~~~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~~~g 433 (535)
+.+||||+|||++++||.+||++|+||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|
T Consensus 289 ~~~~Dil~P~A~~~~I~~~~a~~l~ak~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w- 367 (421)
T 1v9l_A 289 KLDVDIFVPAAIENVIRGDNAGLVKARLVVEGANGPTTPEAERILYERGVVVVPDILANAGGVIMSYLEWVENLQWYIW- 367 (421)
T ss_dssp GCCCSEEEECSCSSCBCTTTTTTCCCSEEECCSSSCBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHHHHHHTTCCC-
T ss_pred cCCccEEEecCcCCccchhhHHHcCceEEEecCCCcCCHHHHHHHHHCCCEEeChHHhhCCCeeeeHHHHHhhccccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred ccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCH
Q psy1913 434 RMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAE-KSDNKLDL 512 (535)
Q Consensus 434 rl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~-~~~~~~~l 512 (535)
+++ +|+++|+++|.++|++|+++|+ +++ +++
T Consensus 368 ------~~e----------------------------------------~v~~~l~~im~~~~~~v~~~a~~~~~--~~~ 399 (421)
T 1v9l_A 368 ------DEE----------------------------------------ETRKRLENIMVNNVERVYKRWQREKG--WTM 399 (421)
T ss_dssp ------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHTTSSS--CCH
T ss_pred ------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHhhcC--CCH
Confidence 663 3899999999999999999999 885 799
Q ss_pred HHHHhHHHHHHHHHHHHHcCCC
Q psy1913 513 RNAAYCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 513 R~AAy~~ai~rv~~a~~~~G~~ 534 (535)
|+|||++|++||+++|+.||+|
T Consensus 400 ~~aA~~~a~~rv~~a~~~~G~~ 421 (421)
T 1v9l_A 400 RDAAIVTALERIYNAMKIRGWI 421 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999986
No 11
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=100.00 E-value=1.1e-115 Score=933.21 Aligned_cols=420 Identities=30% Similarity=0.418 Sum_probs=390.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEe
Q psy1913 39 KENPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHH 118 (535)
Q Consensus 39 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H 118 (535)
..+|+|++++..+|++++.+++ + .|+ ....+++++|++|+|+++|++||.+|+|++++|+|||+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~--~---------~~~---~~~~~~~~~l~~Per~i~~~vp~~~d~G~~~v~~G~rv~h 81 (449)
T 1bgv_A 16 ADEPEFVQTVEEVLSSLGPVVD--A---------HPE---YEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQF 81 (449)
T ss_dssp TTCHHHHHHHHHHHHTTHHHHH--T---------CHH---HHHTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CCCccHHHHHHHHHHHHHHHhc--c---------Chh---hhhhhHHHHhcCCceEEEEEEEEEeCCCCEEEEeEEEEEE
Confidence 3468999999999999999986 2 111 0123599999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCC
Q psy1913 119 CTHKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGI 198 (535)
Q Consensus 119 ~~~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~ 198 (535)
|+++||+||||||||+++++||++||++|||||||++||||||||||.+||+.+|+.|++|++|+|+++|.+ +|||+.
T Consensus 82 n~~~GPakGGlR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGGi~~dP~~~s~~e~~r~~r~f~~~L~~--~ig~~~ 159 (449)
T 1bgv_A 82 NGAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYR--HIGPDI 159 (449)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGG--GCBTTT
T ss_pred cCCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhhCCCCCCccEEEECCCccCCHHHHHHHHHHHHHHhhh--eeCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986 899999
Q ss_pred cccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCC
Q psy1913 199 DVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCM 278 (535)
Q Consensus 199 dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l 278 (535)
||||||+||++++|+||+++|+++.+.. .++++||||+.+|||.+|.++|||||++++++++ +.+|. ++
T Consensus 160 dvpA~DvGt~~~~m~~~~~~y~~~~~~~---~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~------~~~G~--~l 228 (449)
T 1bgv_A 160 DVPAGDLGVGAREIGYMYGQYRKIVGGF---YNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVM------KHEND--TL 228 (449)
T ss_dssp EEEECBTTBCHHHHHHHHHHHHHHHTSC---CGGGSSSCCGGGTCCTTTTTHHHHHHHHHHHHHH------HHTTC--CS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCCC---cCceEecCCcccCCCCCcccchhHHHHHHHHHHH------HHccC--Cc
Confidence 9999999999999999999999988864 6799999999999999999999999999999655 45774 68
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCC----CHHHHHHHHHHc-CCcccCCC---CcccCC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEI----NYKDLHTYKITK-GTIKGYPG---TKSAPT 350 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dL----Di~~L~~~~~~~-g~v~~~~~---a~~i~~ 350 (535)
+|+||+||||||||+++|++|++.|+|||+|||++|+||||+| | |+++|+++++++ +++.+|+. ++.+++
T Consensus 229 ~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~G--i~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~~ 306 (449)
T 1bgv_A 229 VGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEG--ITTEEKINYMLEMRASGRNKVQDYADKFGVQFFPG 306 (449)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTC--SCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEET
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCc--CCCHHHHHHHHHHHhccCCChhhcccccCCEEeCc
Confidence 9999999999999999999999999999999999999999999 9 788999999886 78888865 677877
Q ss_pred -CCccccceEEeeccccccccccccccccc---eEEEecCCCCCCHHHHHHHHhC-CceeeccccccccCcchhhHhhhh
Q psy1913 351 -DIMFDKVDILVPAAIEKVIRKSNADKVQA---KIIVEAANGPLTPAAHAMLLKK-NVLIIPDIFANAGGVTVSYFEWLK 425 (535)
Q Consensus 351 -ell~~~~DILiPaA~~~~It~~na~~i~A---kiIvEgAN~p~T~eA~~iL~~r-GI~viPD~laNaGGVivSy~Ew~q 425 (535)
++|+++||||+|||++|+||.+||++|+| |+|+||||+|+||+|+++|++| ||+|+||+++|||||++|||||+|
T Consensus 307 ~e~~~~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~~~l~~~~Gi~~~PD~~aNaGGV~~S~~E~~q 386 (449)
T 1bgv_A 307 EKPWGQKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFEMSQ 386 (449)
T ss_dssp CCGGGSCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHCTTCEEECHHHHTTHHHHHHHHHHHH
T ss_pred hhhhcCCcceeeccccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHHHHHHHcCCEEEEChHHhcCCCceeehhhhhc
Confidence 89999999999999999999999999998 9999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1913 426 NISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEK 505 (535)
Q Consensus 426 n~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~ 505 (535)
|+++++| +++ +|+++|+++|.++|+.|++++++
T Consensus 387 n~~~~~w-------~~e----------------------------------------ev~~~L~~~m~~~~~~v~~~a~~ 419 (449)
T 1bgv_A 387 NSERLSW-------TAE----------------------------------------EVDSKLHQVMTDIHDGSAAAAER 419 (449)
T ss_dssp HHHTSCC-------CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-------cHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987644 653 28999999999999999999999
Q ss_pred cCCCCCHHHHHhHHHHHHHHHHHHHcCCC
Q psy1913 506 SDNKLDLRNAAYCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 506 ~~~~~~lR~AAy~~ai~rv~~a~~~~G~~ 534 (535)
|+...++|+|||+.|++||++||+.||+|
T Consensus 420 ~~~~~~~~~~A~i~~~~rv~~a~~~~G~~ 448 (449)
T 1bgv_A 420 YGLGYNLVAGANIVGFQKIADAMMAQGIA 448 (449)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred hCCCCCHHHHhhHHHHHHHHHHHHhcCcc
Confidence 97555999999999999999999999965
No 12
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=100.00 E-value=9.2e-104 Score=838.40 Aligned_cols=412 Identities=35% Similarity=0.616 Sum_probs=389.8
Q ss_pred CCCHHHHHHHHHHHHHHhccchhhhhhhhhcCChHHHhhhhhhHHHhhcCCCceEEEEEeEEcCCCceEEeeeeEEEecC
Q psy1913 41 NPGFFESVEYYFHRAVQNLIPEFDVSIRARKFTDEDIALRRNGIIMLMQNYSSLLEIQFPFRRDSGEYELIQCYRCHHCT 120 (535)
Q Consensus 41 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~p~r~~~v~~pv~~d~G~~~~~~gyRv~H~~ 120 (535)
+++||++++.+|++|+.+++ + +|+++++|++|+|+++|++||+||+|++++|+|||+|||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~~l~~p~r~~~~~~p~~~d~G~~~~~~g~rv~~~~ 62 (419)
T 1gtm_A 2 EADPYEIVIKQLERAAQYME--I-----------------SEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNW 62 (419)
T ss_dssp -CTHHHHHHHHHHHHGGGSC--C-----------------CHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred CccHHHHHHHHHHHHHHHhC--C-----------------ChhhhhcCCCCceEEEEEEEEEecCCCEEEEEEEEEEECC
Confidence 57899999999999999987 3 5689999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeecCCCHHHHHHHHHHhhhhhccccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHhccCccCCCCcc
Q psy1913 121 HKSPTKGGIRYALDVNPDEVKALAALMTYKNSCSNVPFGGAKGGIRIDPSKYNNRELERITRKFALELIKKNYVGPGIDV 200 (535)
Q Consensus 121 ~~GPakGGiR~~p~vt~dEv~aLA~~MT~K~Al~~lP~GGaKGgI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 200 (535)
++||+||||||||+++++||++||++|||||||++||||||||||.+||+.+|+.|+||++|+|+++|.+ +|||++||
T Consensus 63 ~~Gp~kGG~R~~~~~~~~ev~~La~~mt~Knal~~lp~GG~Kggi~~dP~~~s~~e~~~~~r~f~~~l~~--~~g~~~dv 140 (419)
T 1gtm_A 63 ARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYD--VISPYEDI 140 (419)
T ss_dssp TTSSEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGG--GCBTTTEE
T ss_pred CCCCCcCCEEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCcEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997 99999999
Q ss_pred cCCCCCCChhhHHHHHHHHhhHhCCCccCCC--ceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCC
Q psy1913 201 PAPDYNTSAREMSWFYDAYAKTLGSTNINAL--GMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCM 278 (535)
Q Consensus 201 papDvgT~~~~Mawi~d~y~~~~G~~~~~~~--~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l 278 (535)
||||+||++++|+||+++|++..|.. .+ +++||||+.+|||.+|.++|||||++++++++ +.+|.+ +|
T Consensus 141 ~a~D~gt~~~~m~~~~~~y~~~~~~~---~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~------~~~G~~-~l 210 (419)
T 1gtm_A 141 PAPDVYTNPQIMAWMMDEYETISRRK---TPAFGIITGKPLSIGGSLGRIEATARGASYTIREAA------KVLGWD-TL 210 (419)
T ss_dssp CCBCTTCCHHHHHHHHHHHHHHHTTS---SCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHH------HHTTCS-CS
T ss_pred eCCCCCCCHHHHHHHHHHHHHhhCCC---CCccceEecCcchhCCCCCCCcchhhHHHHHHHHHH------HHhCCc-cc
Confidence 99999999999999999999999875 45 89999999999999999999999999999555 457863 38
Q ss_pred CCcEEEEEccccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCcccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDK 356 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~ 356 (535)
+|+||.||||||||+++|++|++ .|++|++++|++|.+|+++| +|+++|+++++..+++..|+..+.++. +++..+
T Consensus 211 ~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~~~g--vdl~~L~~~~d~~~~l~~l~~t~~i~~~~l~~mk 288 (419)
T 1gtm_A 211 KGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDG--LNADEVLKWKNEHGSVKDFPGATNITNEELLELE 288 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEE--ECHHHHHHHHHHHSSSTTCTTSEEECHHHHHHSC
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccCccC--CCHHHHHHHHHhcCEeecCccCeeeCHHHHHhCC
Confidence 99999999999999999999999 99999999999999999999 999999999988788888887777766 788899
Q ss_pred ceEEeeccccccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccccccccccc
Q psy1913 357 VDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMS 436 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~~~grl~ 436 (535)
||||||||.+++|+++++..++++.|+|+||.|+|++++.+|..+||++.||+++|+|||++|||||+||+++++|
T Consensus 289 ~dilIn~ArG~~Vde~a~~aL~~~~I~~aAneP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w---- 364 (419)
T 1gtm_A 289 VDVLAPAAIEEVITKKNADNIKAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYW---- 364 (419)
T ss_dssp CSEEEECSCSCCBCTTGGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCCCC----
T ss_pred CCEEEECCCcccCCHHHHHHhcCCEEEEeeCCCCCcchHHHHhcCCEEEECchhhhCCcceeeeehhhhccccccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred cccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Q psy1913 437 FGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAA 516 (535)
Q Consensus 437 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~AA 516 (535)
+.+ +|+++|+++|.++|.++++.|++++ +|+|+||
T Consensus 365 ---~~~----------------------------------------ev~~~l~~~m~~~~~~~~~~a~~~~--~~~~~aA 399 (419)
T 1gtm_A 365 ---TIE----------------------------------------EVRERLDKKMTKAFYDVYNIAKEKN--IHMRDAA 399 (419)
T ss_dssp ---CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHTT--CCHHHHH
T ss_pred ---CHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHC--cCHHHHH
Confidence 553 3899999999999999999999995 7999999
Q ss_pred hHHHHHHHHHHHHHcCCC
Q psy1913 517 YCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 517 y~~ai~rv~~a~~~~G~~ 534 (535)
|++|++||+++|+.||+|
T Consensus 400 ~~~a~~rv~~a~~~~g~~ 417 (419)
T 1gtm_A 400 YVVAVQRVYQAMLDRGWV 417 (419)
T ss_dssp HHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 999999999999999987
No 13
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=100.00 E-value=1.1e-85 Score=686.10 Aligned_cols=335 Identities=26% Similarity=0.338 Sum_probs=297.2
Q ss_pred CCCceEEEEEeEEcCCCceEEeeeeEEEecCCCCCCCCCeeeecCCCHH----HHHHHHHHhhhhhccccCCCCcceEEE
Q psy1913 90 NYSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPD----EVKALAALMTYKNSCSNVPFGGAKGGI 165 (535)
Q Consensus 90 ~p~r~~~v~~pv~~d~G~~~~~~gyRv~H~~~~GPakGGiR~~p~vt~d----Ev~aLA~~MT~K~Al~~lP~GGaKGgI 165 (535)
.|++++ |..+...|. +|||+|||+++||+||||||||++|.+ |+++||++|||||||++||||||||||
T Consensus 9 ~~e~v~---~~~d~~~~~----~~~~~~h~~~~GP~kGG~R~~p~v~~~~~~~ev~~La~~mt~K~al~~lp~GG~Kggi 81 (355)
T 1c1d_A 9 DGEMTV---TRFDAMTGA----HFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSVI 81 (355)
T ss_dssp CSSEEE---EEEETTTTE----EEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEEE
T ss_pred CccEEE---EEEccccce----EEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhhCCCCCCceeeE
Confidence 455544 455555665 999999999999999999999999876 899999999999999999999999999
Q ss_pred ec-CCCC-CCHHHHHHHHHHHHHHHhccCccCCCCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCC
Q psy1913 166 RI-DPSK-YNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGG 243 (535)
Q Consensus 166 ~~-dP~~-~s~~Eler~~r~f~~~L~~~~~iGp~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GG 243 (535)
++ ||+. +|..++|+++|+|.+.|.. ++| .|||||||||++++|+||+++|+ ++||||+.+||
T Consensus 82 ~~~dP~~~~s~~~~e~~~r~~~~~~~~--l~g--~~ipa~D~gt~~~~m~~~~~~~~------------~~tGk~~~~GG 145 (355)
T 1c1d_A 82 ALPAPRHSIDPSTWARILRIHAENIDK--LSG--NYWTGPDVNTNSADMDTLNDTTE------------FVFGRSLERGG 145 (355)
T ss_dssp ECSSCGGGCCHHHHHHHHHHHHHHHHH--TTT--SEEEEECTTCCHHHHHHHHHHCS------------CBCCCCGGGTS
T ss_pred eccCcccccChhhHHHHHHHHHHHHHH--hcC--CcccCCCCCCCHHHHHHHHHhcC------------eeeccchhhCC
Confidence 99 9999 9999999999999999886 666 49999999999999999999983 48999999999
Q ss_pred CCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCC
Q psy1913 244 IRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTE 323 (535)
Q Consensus 244 s~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~d 323 (535)
|.+|.++|||||+++++++++ .+|. ++++|+||+||||||||+++|++|++.|++|| ++|
T Consensus 146 s~~~~~aTg~Gv~~~~~~~~~------~~G~-~~L~GktV~I~G~GnVG~~~A~~l~~~GakVv-vsD------------ 205 (355)
T 1c1d_A 146 AGSSAFTTAVGVFEAMKATVA------HRGL-GSLDGLTVLVQGLGAVGGSLASLAAEAGAQLL-VAD------------ 205 (355)
T ss_dssp CCCCHHHHHHHHHHHHHHHHH------HTTC-CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC------------
T ss_pred CCCchhHHHHHHHHHHHHHHH------hcCC-CCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEe------------
Confidence 999999999999999996654 5675 35899999999999999999999999999999 665
Q ss_pred CCHHHHHHHHHHcCCcccCCCCcccCC-CCccccceEEeeccccccccccccccccceEEEecCCCCCC-HHHHHHHHhC
Q psy1913 324 INYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLT-PAAHAMLLKK 401 (535)
Q Consensus 324 LDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T-~eA~~iL~~r 401 (535)
.|.+. .++.++. +++.++. ++|..+||||+|||++++||.+|+..++|++|+|+||+|+| ++|+++|+++
T Consensus 206 ~~~~~-~~~a~~~-------ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~lk~~iVie~AN~p~t~~eA~~~L~~~ 277 (355)
T 1c1d_A 206 TDTER-VAHAVAL-------GHTAVALEDVLSTPCDVFAPCAMGGVITTEVARTLDCSVVAGAANNVIADEAASDILHAR 277 (355)
T ss_dssp SCHHH-HHHHHHT-------TCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHHCCCSEECCSCTTCBCSHHHHHHHHHT
T ss_pred CCccH-HHHHHhc-------CCEEeChHHhhcCccceecHhHHHhhcCHHHHhhCCCCEEEECCCCCCCCHHHHHHHHhC
Confidence 45554 4455443 4566666 89999999999999999999999999999999999999988 4999999999
Q ss_pred CceeeccccccccCcchhh-HhhhhccccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccch
Q psy1913 402 NVLIIPDIFANAGGVTVSY-FEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATE 480 (535)
Q Consensus 402 GI~viPD~laNaGGVivSy-~Ew~qn~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e 480 (535)
||+|+||+++||||||+|| |||. .|+++
T Consensus 278 gIlv~Pd~~aNaGGV~~s~~~E~~-------------~w~~e-------------------------------------- 306 (355)
T 1c1d_A 278 GILYAPDFVANAGGAIHLVGREVL-------------GWSES-------------------------------------- 306 (355)
T ss_dssp TCEECCHHHHTTHHHHHHHHHHTT-------------CCCHH--------------------------------------
T ss_pred CEEEECCeEEcCCCeeeeeeehhc-------------CCCHH--------------------------------------
Confidence 9999999999999999999 9992 46774
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHhHHHHHHHHHHHHHc
Q psy1913 481 KDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAAYCSALFKIFKTYEEA 531 (535)
Q Consensus 481 ~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~AAy~~ai~rv~~a~~~~ 531 (535)
+|+++|+++| ++|++|++.+++++ +++|+|||++|++||+++|..+
T Consensus 307 --~v~~~l~~i~-~~~~~i~~~~~~~~--~~~~~aA~~~a~~rv~~a~~~~ 352 (355)
T 1c1d_A 307 --VVHERAVAIG-DTLNQVFEISDNDG--VTPDEAARTLAGRRAREASTTT 352 (355)
T ss_dssp --HHHHHHHTHH-HHHHHHHHHHHHHT--CCHHHHHHHHHHHHHHHTC---
T ss_pred --HHHHHHHHHH-HHHHHHHHHHHHhC--cCHHHHHHHHHHHHHHHHHhhc
Confidence 2888999999 89999999999995 8999999999999999998764
No 14
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=1.1e-82 Score=665.96 Aligned_cols=336 Identities=24% Similarity=0.286 Sum_probs=297.0
Q ss_pred CCceEEEEEeEEcCCCceEEeeeeEEEecCCCCCCCCCeeeecCCCHH----HHHHHHHHhhhhhccccCCCCcceEEEe
Q psy1913 91 YSSLLEIQFPFRRDSGEYELIQCYRCHHCTHKSPTKGGIRYALDVNPD----EVKALAALMTYKNSCSNVPFGGAKGGIR 166 (535)
Q Consensus 91 p~r~~~v~~pv~~d~G~~~~~~gyRv~H~~~~GPakGGiR~~p~vt~d----Ev~aLA~~MT~K~Al~~lP~GGaKGgI~ 166 (535)
|+++ .|..+...|. +|||+|||+++||+||||||||++|.+ |+++||+||||||||++||||||||||+
T Consensus 12 ~e~v---~~~~d~~~~~----~~~~~~h~~~~Gp~kGG~R~~p~v~~~~~~~e~~~La~~mt~K~al~~lp~GG~Kggi~ 84 (364)
T 1leh_A 12 YEQL---VFCQDEASGL----KAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTVII 84 (364)
T ss_dssp CCEE---EEEEETTTTE----EEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEEEE
T ss_pred CeEE---EEEEccCcce----EEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhcCCCCcCcceEEe
Confidence 5554 4555566775 999999999999999999999999977 8999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhccCccCCCCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCC
Q psy1913 167 IDPSKYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRG 246 (535)
Q Consensus 167 ~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~g 246 (535)
+||+.++..+ ++|+|.+.+.. ++| .||||||+||++++|+||+++|+ ++||||+.+|||.+
T Consensus 85 ~dP~~~~~~~---~~r~~~~~~~~--l~g--~~i~A~D~Gt~~~~m~~l~~~~~------------~~tGK~~~~ggs~~ 145 (364)
T 1leh_A 85 GDPFADKNED---MFRALGRFIQG--LNG--RYITAEDVGTTVDDMDLIHQETD------------YVTGISPAFGSSGN 145 (364)
T ss_dssp SCTTTTCCHH---HHHHHHHHHHT--TTT--SEEBCBCTTCCHHHHHHHHTTCS------------CBCSCCHHHHHHCC
T ss_pred CCCCCCCHHH---HHHHHHHHHHH--hcC--ceEEcccCCCCHHHHHHHHHhcc------------hhcccccccCCCCC
Confidence 9999987555 55666665654 555 49999999999999999999873 47999999999999
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCH
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINY 326 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi 326 (535)
|.++||+||++++++++++ .+|. ++|+|+||+||||||||+++|+.|++.|++|| | +|+|.
T Consensus 146 ~~~aTg~GV~~~~~~~~~~-----~~G~-~~L~GktV~V~G~G~VG~~~A~~L~~~GakVv-v------------~D~~~ 206 (364)
T 1leh_A 146 PSPVTAYGVYRGMKAAAKE-----AFGS-DSLEGLAVSVQGLGNVAKALCKKLNTEGAKLV-V------------TDVNK 206 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----HHSS-CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-E------------ECSCH
T ss_pred cccchhhHHHHHHHHHHHh-----hccc-cCCCcCEEEEECchHHHHHHHHHHHHCCCEEE-E------------EcCCH
Confidence 9999999999999966653 2574 35899999999999999999999999999999 4 44788
Q ss_pred HHHHHHHHHcCCcccCCCCcccCC-CCccccceEEeeccccccccccccccccceEEEecCCCCCC-HHHHHHHHhCCce
Q psy1913 327 KDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLT-PAAHAMLLKKNVL 404 (535)
Q Consensus 327 ~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T-~eA~~iL~~rGI~ 404 (535)
+++.++.++.+ ++.++. ++|..+|||++||+++++|+.+++..++|++|+|+||+|+| +++.++|+++||+
T Consensus 207 ~~l~~~a~~~g-------a~~v~~~~ll~~~~DIvip~a~~~~I~~~~~~~lg~~iV~e~An~p~t~~ea~~~L~~~Gi~ 279 (364)
T 1leh_A 207 AAVSAAVAEEG-------ADAVAPNAIYGVTCDIFAPCALGAVLNDFTIPQLKAKVIAGSADNQLKDPRHGKYLHELGIV 279 (364)
T ss_dssp HHHHHHHHHHC-------CEECCGGGTTTCCCSEEEECSCSCCBSTTHHHHCCCSEECCSCSCCBSSHHHHHHHHHHTCE
T ss_pred HHHHHHHHHcC-------CEEEChHHHhccCCcEeeccchHHHhCHHHHHhCCCcEEEeCCCCCcccHHHHHHHHhCCCE
Confidence 88888887753 455665 78889999999999999999999999999999999999977 5999999999999
Q ss_pred eeccccccccCcchhhHhhhhccccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHH
Q psy1913 405 IIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIV 484 (535)
Q Consensus 405 viPD~laNaGGVivSy~Ew~qn~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V 484 (535)
|+||+++|||||++|||||+ .|+++ +|
T Consensus 280 ~~Pd~~~NaGGv~~s~~E~~-------------~~~~e----------------------------------------~v 306 (364)
T 1leh_A 280 YAPDYVINAGGVINVADELY-------------GYNRT----------------------------------------RA 306 (364)
T ss_dssp ECCHHHHTTHHHHHHHHGGG-------------CCCHH----------------------------------------HH
T ss_pred EecceeecCCceEEEEEeec-------------CCCHH----------------------------------------HH
Confidence 99999999999999999992 46774 28
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHhHHHHHHHHHHHHHcCCC
Q psy1913 485 QSSLTHSMQRAGRDILEYAEKSDNKLDLRNAAYCSALFKIFKTYEEAGLE 534 (535)
Q Consensus 485 ~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~AAy~~ai~rv~~a~~~~G~~ 534 (535)
+++|+.+| ++|++|++.+++++ +++|+|||++|++||+++++.||+|
T Consensus 307 ~~~l~~i~-~~~~~i~~~~~~~~--~~~~~aA~~~a~~ri~~a~~~~~~~ 353 (364)
T 1leh_A 307 MKRVDGIY-DSIEKIFAISKRDG--VPSYVAADRMAEERIAKVAKARSQF 353 (364)
T ss_dssp HHHHTHHH-HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHH-HHHHHHHHHHHHhC--cCHHHHHHHHHHHHHHHHHHhCCcc
Confidence 88999998 89999999999985 8999999999999999999999987
No 15
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.82 E-value=5.6e-05 Score=77.74 Aligned_cols=83 Identities=18% Similarity=0.259 Sum_probs=63.9
Q ss_pred CCCcEEEEEccccHHHHHHHHHHH-------CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRR-------GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT 350 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e-------~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ 350 (535)
++..+|+|.|+|+||+.+++.|.+ .+.+|++|+|++...++++ +|++.+.+.+++.+.+..+ .++.
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~---idl~~~~~~~~~~g~~~~~----~~d~ 74 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN---LDISSIISNKEKTGRISDR----AFSG 74 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS---CCHHHHHHHHHHHSCSCSS----BCCS
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc---cCHHHHHHHhhhcCCCCcc----cCCH
Confidence 345799999999999999999987 3679999999999999865 8888887776666644322 1233
Q ss_pred -CCc-cccceEEeeccccc
Q psy1913 351 -DIM-FDKVDILVPAAIEK 367 (535)
Q Consensus 351 -ell-~~~~DILiPaA~~~ 367 (535)
+++ ..++||++.|+...
T Consensus 75 ~e~l~~~~iDvVVe~T~~~ 93 (325)
T 3ing_A 75 PEDLMGEAADLLVDCTPAS 93 (325)
T ss_dssp GGGGTTSCCSEEEECCCCC
T ss_pred HHHhcCCCCCEEEECCCCc
Confidence 555 56899999999765
No 16
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.59 E-value=0.00015 Score=77.80 Aligned_cols=97 Identities=21% Similarity=0.222 Sum_probs=68.6
Q ss_pred HHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccC
Q psy1913 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAP 349 (535)
Q Consensus 270 ~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~ 349 (535)
+..|. .+.|++|.|.|||+||+.+|+.|...|++|++ +|.|+....+.... +.+.++
T Consensus 239 Ratg~--~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv-------------~d~dp~~a~~A~~~--------G~~vv~ 295 (464)
T 3n58_A 239 RGTDV--MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKV-------------TEVDPICALQAAMD--------GFEVVT 295 (464)
T ss_dssp HHHCC--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSSHHHHHHHHHT--------TCEECC
T ss_pred HhcCC--cccCCEEEEECcCHHHHHHHHHHHHCCCEEEE-------------EeCCcchhhHHHhc--------Cceecc
Confidence 34554 48999999999999999999999999999998 66777654443322 222222
Q ss_pred C-CCccccceEEeeccc-ccccccccccccc-ceEEEecCCCCC
Q psy1913 350 T-DIMFDKVDILVPAAI-EKVIRKSNADKVQ-AKIIVEAANGPL 390 (535)
Q Consensus 350 ~-ell~~~~DILiPaA~-~~~It~~na~~i~-AkiIvEgAN~p~ 390 (535)
- +++ ..+||++.|+. .+.|+.+....++ --+|+..+.+..
T Consensus 296 LeElL-~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 296 LDDAA-STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp HHHHG-GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred HHHHH-hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence 2 444 37999999875 4577777777775 356666666653
No 17
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.54 E-value=0.00037 Score=74.44 Aligned_cols=96 Identities=19% Similarity=0.284 Sum_probs=71.1
Q ss_pred HhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC
Q psy1913 271 EIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT 350 (535)
Q Consensus 271 ~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ 350 (535)
..+. .+.|++|.|.|+|++|+.+|+.|...|++|++ +|.|.....+.... | .+..+-
T Consensus 204 atg~--~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv-------------~D~~p~~a~~A~~~-G-------~~~~sL 260 (436)
T 3h9u_A 204 ATDV--MIAGKTACVCGYGDVGKGCAAALRGFGARVVV-------------TEVDPINALQAAME-G-------YQVLLV 260 (436)
T ss_dssp HHCC--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHT-T-------CEECCH
T ss_pred hcCC--cccCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-------------ECCChhhhHHHHHh-C-------CeecCH
Confidence 3454 48999999999999999999999999999988 55666555444332 1 222222
Q ss_pred -CCccccceEEeeccc-ccccccccccccc-ceEEEecCCCCC
Q psy1913 351 -DIMFDKVDILVPAAI-EKVIRKSNADKVQ-AKIIVEAANGPL 390 (535)
Q Consensus 351 -ell~~~~DILiPaA~-~~~It~~na~~i~-AkiIvEgAN~p~ 390 (535)
+++ ..+||++.|.. .+.|+.+....++ --+|+..++++.
T Consensus 261 ~eal-~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 261 EDVV-EEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDT 302 (436)
T ss_dssp HHHT-TTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSGG
T ss_pred HHHH-hhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCCC
Confidence 444 37999998775 5788988888886 368888888874
No 18
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.52 E-value=0.00032 Score=74.86 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=68.1
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
.+.|++|.|.|+|++|+.+|+.|...|++|++ +|.|+....+.... | .+..+- +++ .
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv-------------~D~dp~ra~~A~~~-G-------~~v~~Leeal-~ 274 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGSIVYV-------------TEIDPICALQACMD-G-------FRLVKLNEVI-R 274 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHT-T-------CEECCHHHHT-T
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-------------EeCChhhhHHHHHc-C-------CEeccHHHHH-h
Confidence 47999999999999999999999999999988 66776554443322 1 122222 333 3
Q ss_pred cceEEeeccc-ccccccccccccc-ceEEEecCCCCC
Q psy1913 356 KVDILVPAAI-EKVIRKSNADKVQ-AKIIVEAANGPL 390 (535)
Q Consensus 356 ~~DILiPaA~-~~~It~~na~~i~-AkiIvEgAN~p~ 390 (535)
.+||++.|+. .+.|+.+....++ -.+|+..++++.
T Consensus 275 ~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 275 QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 7899999865 6778877777776 357888888875
No 19
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.42 E-value=0.0013 Score=64.63 Aligned_cols=125 Identities=17% Similarity=0.118 Sum_probs=81.3
Q ss_pred hCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-
Q psy1913 272 IGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT- 350 (535)
Q Consensus 272 ~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~- 350 (535)
.|. +++| +|.|.|+|++|+.+++.|.+.|++|+. . +-+.+...+..++.+. . ++.
T Consensus 111 ~~~--~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v-~------------~r~~~~~~~l~~~~~~-------~-~~~~ 166 (263)
T 2d5c_A 111 GGI--PLKG-PALVLGAGGAGRAVAFALREAGLEVWV-W------------NRTPQRALALAEEFGL-------R-AVPL 166 (263)
T ss_dssp TTC--CCCS-CEEEECCSHHHHHHHHHHHHTTCCEEE-E------------CSSHHHHHHHHHHHTC-------E-ECCG
T ss_pred hCC--CCCC-eEEEECCcHHHHHHHHHHHHCCCEEEE-E------------ECCHHHHHHHHHHhcc-------c-hhhH
Confidence 454 4789 999999999999999999999996654 3 3455555555555432 1 222
Q ss_pred -CCccccceEEeeccccccccc--c--cccccc-ceEEEecCCCCC-CHHHHHHHHhCCceeeccccccccCcchhhHhh
Q psy1913 351 -DIMFDKVDILVPAAIEKVIRK--S--NADKVQ-AKIIVEAANGPL-TPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEW 423 (535)
Q Consensus 351 -ell~~~~DILiPaA~~~~It~--~--na~~i~-AkiIvEgAN~p~-T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew 423 (535)
++ .+|||+|-|...+.... . ..+.++ -++|++-+.+|. | +..+.++++|+.++|..-.-.+..+.++..|
T Consensus 167 ~~~--~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t-~l~~~a~~~g~~~v~g~~mlv~q~~~a~~~w 243 (263)
T 2d5c_A 167 EKA--REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWT-RFLREAKAKGLKVQTGLPMLAWQGALAFRLW 243 (263)
T ss_dssp GGG--GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSC-HHHHHHHHTTCEEECSHHHHHHHHHHHHHHH
T ss_pred hhc--cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCccc-HHHHHHHHCcCEEECcHHHHHHHHHHHHHHH
Confidence 34 78999999988653210 1 123343 358889887774 5 4556678899998876433333333334344
No 20
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.41 E-value=0.0031 Score=62.96 Aligned_cols=192 Identities=15% Similarity=0.158 Sum_probs=107.2
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcc-cCC--CCcccc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKS-APT--DIMFDK 356 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~-i~~--ell~~~ 356 (535)
.++|.|.|+|++|..+|+.|.+.|..|+. .|.+.+.+.+..+. | ... .+. +++ .+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~-------------~dr~~~~~~~~~~~-g-------~~~~~~~~~e~~-~~ 64 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWG-------------ADLNPQACANLLAE-G-------ACGAAASAREFA-GV 64 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHT-T-------CSEEESSSTTTT-TT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEE-------------EECCHHHHHHHHHc-C-------CccccCCHHHHH-hc
Confidence 46899999999999999999999999887 44667777666543 2 222 222 333 47
Q ss_pred ceEEeecccccccccc-------cccccc-ceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhc
Q psy1913 357 VDILVPAAIEKVIRKS-------NADKVQ-AKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426 (535)
Q Consensus 357 ~DILiPaA~~~~It~~-------na~~i~-AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn 426 (535)
||++|-|........+ -.+.++ -++|+...+.+ ++.+..+.+.++|+.++. .--+||.... + -..
T Consensus 65 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~--~pv~g~~~~a--~-~g~ 139 (303)
T 3g0o_A 65 VDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD--APVSGGAVKA--A-QGE 139 (303)
T ss_dssp CSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE--CCEESCHHHH--H-TTC
T ss_pred CCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe--CCCCCChhhh--h-cCC
Confidence 9999999876432222 223332 36777777654 234555678889998764 2234444211 0 000
Q ss_pred cccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcch-hhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1913 427 ISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKS-AMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEK 505 (535)
Q Consensus 427 ~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~ 505 (535)
+ .+ +... +++ ..+.+..+-+. +|.++....+ ......+ .+++.-+...+...+.+...++++
T Consensus 140 l-~~----~~gg-~~~-~~~~~~~ll~~----~g~~~~~~~~~~g~a~~~------Kl~~N~~~~~~~~~~~Ea~~l~~~ 202 (303)
T 3g0o_A 140 M-TV----MASG-SEA-AFTRLKPVLDA----VASNVYRISDTPGAGSTV------KIIHQLLAGVHIAAAAEAMALAAR 202 (303)
T ss_dssp E-EE----EEEC-CHH-HHHHHHHHHHH----HEEEEEEEESSTTHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred e-EE----EeCC-CHH-HHHHHHHHHHH----HCCCEEECCCCCcHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0001 221 11122222121 1221111111 1122222 256777777788888999999999
Q ss_pred cCCCCCHHHHHh
Q psy1913 506 SDNKLDLRNAAY 517 (535)
Q Consensus 506 ~~~~~~lR~AAy 517 (535)
.+ +|..+..-
T Consensus 203 ~G--~d~~~~~~ 212 (303)
T 3g0o_A 203 AG--IPLDVMYD 212 (303)
T ss_dssp TT--CCHHHHHH
T ss_pred cC--CCHHHHHH
Confidence 85 67665443
No 21
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.40 E-value=0.0014 Score=68.81 Aligned_cols=156 Identities=16% Similarity=0.165 Sum_probs=100.8
Q ss_pred cccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCC
Q psy1913 199 DVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNEEYMCEIGLEPCM 278 (535)
Q Consensus 199 dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l 278 (535)
.|-....|++.-+++++.+ .|- .|+.-| | ....+++-.++..+.++ .+.+|. .+
T Consensus 61 ~I~~~~~G~D~iD~~~~~~-----~gI-------~v~n~p----g--~~~~~vAE~~l~~lL~l------~r~~~~--~l 114 (380)
T 2o4c_A 61 FVGTCTIGTDHLDLDYFAE-----AGI-------AWSSAP----G--CNARGVVDYVLGCLLAM------AEVRGA--DL 114 (380)
T ss_dssp EEEECSSCSTTBCHHHHHH-----HTC-------EEECCT----T--TTHHHHHHHHHHHHHHH------HHHHTC--CG
T ss_pred EEEEcCcccchhhHHHHHh-----CCC-------EEEeCC----C--cChHHHHHHHHHHHHHH------Hhhhhc--cc
Confidence 4566778888878888753 232 244444 1 11345555555555533 345664 58
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKV 357 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~ 357 (535)
.|+||.|+|+|++|+.+|+.|...|++|++ .|...-. ... +....+. +++. +|
T Consensus 115 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~---------------~d~~~~~---~~~-------g~~~~~l~ell~-~a 168 (380)
T 2o4c_A 115 AERTYGVVGAGQVGGRLVEVLRGLGWKVLV---------------CDPPRQA---REP-------DGEFVSLERLLA-EA 168 (380)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHTTCEEEE---------------ECHHHHH---HST-------TSCCCCHHHHHH-HC
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHCCCEEEE---------------EcCChhh---hcc-------CcccCCHHHHHH-hC
Confidence 999999999999999999999999999988 3332211 111 1111122 4443 89
Q ss_pred eEEeeccc---------cccccccccccccc-eEEEecCCCCC-CH-HHHHHHHhCCceee
Q psy1913 358 DILVPAAI---------EKVIRKSNADKVQA-KIIVEAANGPL-TP-AAHAMLLKKNVLII 406 (535)
Q Consensus 358 DILiPaA~---------~~~It~~na~~i~A-kiIvEgAN~p~-T~-eA~~iL~~rGI~vi 406 (535)
||++.|.. .+.|+.+....++. .+++..+.+++ .. +..+.|.+++|.-+
T Consensus 169 DvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A 229 (380)
T 2o4c_A 169 DVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEV 229 (380)
T ss_dssp SEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEE
T ss_pred CEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceE
Confidence 99999874 45566666666763 68899999984 43 34567888877654
No 22
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.38 E-value=0.00073 Score=69.48 Aligned_cols=124 Identities=20% Similarity=0.355 Sum_probs=75.8
Q ss_pred cEEEEEccccHHHHHHHHHHHC---------CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG---------RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT- 350 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~---------GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~- 350 (535)
.+|+|.|+|+||+.+++.|.+. +.+|++|+|++....++ +|.......+...+.+.. ..+.
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~----id~~~~~~~~~~~~~~~~-----~~d~~ 73 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD----FSLVEALRMKRETGMLRD-----DAKAI 73 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS----CCHHHHHHHHHHHSSCSB-----CCCHH
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc----cCHHHHHhhhccCccccC-----CCCHH
Confidence 5899999999999999999864 78999999999888864 676655443332222110 0122
Q ss_pred CCc-cccceEEeeccccccccccccccc-----c--ceEEEecCCCCCCH---HHHHHHHhCCceeeccccccccCcc
Q psy1913 351 DIM-FDKVDILVPAAIEKVIRKSNADKV-----Q--AKIIVEAANGPLTP---AAHAMLLKKNVLIIPDIFANAGGVT 417 (535)
Q Consensus 351 ell-~~~~DILiPaA~~~~It~~na~~i-----~--AkiIvEgAN~p~T~---eA~~iL~~rGI~viPD~laNaGGVi 417 (535)
+++ ..++|+++-|+..+.-+.+ +..+ + ..+|+| .-.|++. +..++.+++|+.+. |-++.|+-+
T Consensus 74 ~ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~-NKkpla~~~~eL~~~A~~~g~~~~--~ea~v~~g~ 147 (327)
T 3do5_A 74 EVVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTS-NKGPLVAEFHGLMSLAERNGVRLM--YEATVGGAM 147 (327)
T ss_dssp HHHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEEC-CSHHHHHHHHHHHHHHHHTTCCEE--CGGGSSTTS
T ss_pred HHhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEec-CchhhHHHHHHHHHHHHhhCCcEE--EEEEeeecC
Confidence 555 4589999999976543333 3222 2 355555 2234333 33344567888665 445555443
No 23
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=97.37 E-value=0.0023 Score=63.51 Aligned_cols=188 Identities=11% Similarity=0.123 Sum_probs=105.5
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|+|.|+|++|..+|+.|.+.|.+|+. .|.+.+.+.+..+. | ....+. +++ .+||
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~-------------~d~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~aD 61 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNV-------------FDLVQSAVDGLVAA-G-------ASAARSARDAV-QGAD 61 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEE-------------ECSSHHHHHHHHHT-T-------CEECSSHHHHH-TTCS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEE-------------EcCCHHHHHHHHHC-C-------CeEcCCHHHHH-hCCC
Confidence 6899999999999999999999999887 44667777666543 2 222222 332 4799
Q ss_pred EEeecccccccccc-------cccccc-ceEEEecCCCC-C-CHHHHHHHHhCCceeeccccccccCcchhhHhhhhccc
Q psy1913 359 ILVPAAIEKVIRKS-------NADKVQ-AKIIVEAANGP-L-TPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428 (535)
Q Consensus 359 ILiPaA~~~~It~~-------na~~i~-AkiIvEgAN~p-~-T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~ 428 (535)
++|-|........+ -.+.++ -++|+.-.+.+ . +.+..+.+.++|+.++.- -+.|+.. ..+.-+ +.
T Consensus 62 vvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~--pv~~~~~--~~~~g~-l~ 136 (302)
T 2h78_A 62 VVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA--PVSGGTA--GAAAGT-LT 136 (302)
T ss_dssp EEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC--CEESCHH--HHHHTC-EE
T ss_pred eEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE--EccCChh--hHhcCC-ce
Confidence 99999864432222 222332 36777766665 2 345667788899887742 4566552 111111 10
Q ss_pred cccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q psy1913 429 HSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDN 508 (535)
Q Consensus 429 ~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~ 508 (535)
- +... +++ ..+.+..+-+. +|.+.....+......++ +++.-+-..+...+.+...++++.+
T Consensus 137 ~-----~~~g-~~~-~~~~~~~ll~~----~g~~~~~~~~~~~~~~~K------l~~n~~~~~~~~~~~Ea~~l~~~~G- 198 (302)
T 2h78_A 137 F-----MVGG-DAE-ALEKARPLFEA----MGRNIFHAGPDGAGQVAK------VCNNQLLAVLMIGTAEAMALGVANG- 198 (302)
T ss_dssp E-----EEES-CHH-HHHHHHHHHHH----HEEEEEEEESTTHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred E-----EeCC-CHH-HHHHHHHHHHH----hCCCeEEcCCccHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 0 0001 222 11222222221 222211111122222222 4666666677778889999999885
Q ss_pred CCCHHH
Q psy1913 509 KLDLRN 514 (535)
Q Consensus 509 ~~~lR~ 514 (535)
+|..+
T Consensus 199 -~~~~~ 203 (302)
T 2h78_A 199 -LEAKV 203 (302)
T ss_dssp -CCHHH
T ss_pred -CCHHH
Confidence 66544
No 24
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.35 E-value=0.00069 Score=67.81 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=73.0
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc--CC--CC
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA--PT--DI 352 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i--~~--el 352 (535)
++.|++|.|.|+|++|+.+|+.|...|++|++ .|-+.+.+.... +.| .+.+ .. ++
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~-------------~dr~~~~~~~~~-~~g-------~~~~~~~~l~~~ 210 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGAKVKV-------------GARESDLLARIA-EMG-------MEPFHISKAAQE 210 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------EESSHHHHHHHH-HTT-------SEEEEGGGHHHH
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEE-------------EECCHHHHHHHH-HCC-------CeecChhhHHHH
Confidence 58999999999999999999999999999887 224444443332 222 2222 11 33
Q ss_pred ccccceEEeecccccccccccccccc-ceEEEecCCCCCCHHHHHHHHhCCceee
Q psy1913 353 MFDKVDILVPAAIEKVIRKSNADKVQ-AKIIVEAANGPLTPAAHAMLLKKNVLII 406 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~~na~~i~-AkiIvEgAN~p~T~eA~~iL~~rGI~vi 406 (535)
+ ..|||++-|+..+.++.+....++ -.+|+.-+-+|..-+. +...++|+.++
T Consensus 211 l-~~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 211 L-RDVDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF-RYAEKRGIKAL 263 (293)
T ss_dssp T-TTCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH-HHHHHHTCEEE
T ss_pred h-cCCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH-HHHHHCCCEEE
Confidence 3 479999999988888776666664 3577777766632122 45577788764
No 25
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.31 E-value=0.00041 Score=69.63 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=79.2
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc--CC--CC
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA--PT--DI 352 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i--~~--el 352 (535)
++.|++|.|.|+|++|+.+|+.|...|++|++ .|-+.+.+....+ .| .+.+ .. ++
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~-------------~d~~~~~~~~~~~-~g-------~~~~~~~~l~~~ 212 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGANVKV-------------GARSSAHLARITE-MG-------LVPFHTDELKEH 212 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTCEEEE-------------EESSHHHHHHHHH-TT-------CEEEEGGGHHHH
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCCEEEE-------------EECCHHHHHHHHH-CC-------CeEEchhhHHHH
Confidence 58999999999999999999999999999887 3344454443332 22 2211 12 33
Q ss_pred ccccceEEeecccccccccccccccc-ceEEEecCCCCCCHHHHHHHHhCCceee--ccccccccCc
Q psy1913 353 MFDKVDILVPAAIEKVIRKSNADKVQ-AKIIVEAANGPLTPAAHAMLLKKNVLII--PDIFANAGGV 416 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~~na~~i~-AkiIvEgAN~p~T~eA~~iL~~rGI~vi--PD~laNaGGV 416 (535)
+ ..|||++-|+..+.++.+....++ -.+|+.-+-+|..-+. +...++|+.++ |..-...+..
T Consensus 213 l-~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~~g~v~~a 277 (300)
T 2rir_A 213 V-KDIDICINTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF-KYAEKQGIKALLAPGLPGIVAPK 277 (300)
T ss_dssp S-TTCSEEEECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHHCHH
T ss_pred h-hCCCEEEECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH-HHHHHCCCEEEECCCCCCcHHHH
Confidence 3 489999999998888877666664 3577887777732222 45677898765 6544333333
No 26
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.15 E-value=0.0027 Score=62.74 Aligned_cols=190 Identities=12% Similarity=0.090 Sum_probs=102.7
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|.|.|+|++|..+|+.|.+.|..|+. .|.+.+.+.+..+. +....+. +++ .+||
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~-------------~dr~~~~~~~~~~~--------g~~~~~~~~~~~-~~aD 59 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTI-------------WNRSPEKAEELAAL--------GAERAATPCEVV-ESCP 59 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSSGGGGHHHHHT--------TCEECSSHHHHH-HHCS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEE-------------EcCCHHHHHHHHHC--------CCeecCCHHHHH-hcCC
Confidence 5899999999999999999999999876 33444444444432 2232232 332 4799
Q ss_pred EEeecccccccccccc-------ccc-cceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccc
Q psy1913 359 ILVPAAIEKVIRKSNA-------DKV-QAKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428 (535)
Q Consensus 359 ILiPaA~~~~It~~na-------~~i-~AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~ 428 (535)
+++-|.....-..+-+ +.+ .-++|+...+.+ ++.+..+.+.++|+.++. ..-.||.... + +...
T Consensus 60 vvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~--~pv~g~~~~a--~--~g~l 133 (287)
T 3pef_A 60 VTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE--APVSGSKKPA--E--DGTL 133 (287)
T ss_dssp EEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE--CCEECCHHHH--H--HTCE
T ss_pred EEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE--CCCcCCHHHH--h--cCCE
Confidence 9999987432222222 223 235777776654 234556778899998763 2233443221 0 0000
Q ss_pred cccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q psy1913 429 HSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDN 508 (535)
Q Consensus 429 ~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~ 508 (535)
.+ |... +++ ..+.+..+-+. +|.+.....+......+ .+++.-+...+...+.+...++++.+
T Consensus 134 ~~----~~gg-~~~-~~~~~~~ll~~----~g~~~~~~g~~g~~~~~------Kl~~N~~~~~~~~~~~E~~~l~~~~G- 196 (287)
T 3pef_A 134 II----LAAG-DRN-LYDEAMPGFEK----MGKKIIHLGDVGKGAEM------KLVVNMVMGGMMACFCEGLALGEKAG- 196 (287)
T ss_dssp EE----EEEE-CHH-HHHHHHHHHHH----HEEEEEECSSTTHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred EE----EEeC-CHH-HHHHHHHHHHH----hCCCeEEeCCCCHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 00 0001 221 11122222111 22211111112222222 25677777777888999999999985
Q ss_pred CCCHHHHH
Q psy1913 509 KLDLRNAA 516 (535)
Q Consensus 509 ~~~lR~AA 516 (535)
+|..+..
T Consensus 197 -~d~~~~~ 203 (287)
T 3pef_A 197 -LATDAIL 203 (287)
T ss_dssp -CCHHHHH
T ss_pred -CCHHHHH
Confidence 6766543
No 27
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.15 E-value=0.0019 Score=64.10 Aligned_cols=140 Identities=11% Similarity=0.089 Sum_probs=88.9
Q ss_pred chHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHH
Q psy1913 250 ATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDL 329 (535)
Q Consensus 250 aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L 329 (535)
.++.|+..+++ ..|. ++++++|.|.|.|.+|+.+++.|.+.|++|+. . +-+.+.+
T Consensus 111 Td~~G~~~~l~----------~~~~--~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v-~------------~r~~~~~ 165 (275)
T 2hk9_A 111 TDWIGFLKSLK----------SLIP--EVKEKSILVLGAGGASRAVIYALVKEGAKVFL-W------------NRTKEKA 165 (275)
T ss_dssp CHHHHHHHHHH----------HHCT--TGGGSEEEEECCSHHHHHHHHHHHHHTCEEEE-E------------CSSHHHH
T ss_pred CCHHHHHHHHH----------HhCC--CcCCCEEEEECchHHHHHHHHHHHHcCCEEEE-E------------ECCHHHH
Confidence 46788777766 2354 46899999999999999999999999996654 3 3455555
Q ss_pred HHHHHHcCCcccCCCCcccCC--CCccccceEEeeccccccccc--cc--ccccc-ceEEEecCCCCCCHHHHHHHHhCC
Q psy1913 330 HTYKITKGTIKGYPGTKSAPT--DIMFDKVDILVPAAIEKVIRK--SN--ADKVQ-AKIIVEAANGPLTPAAHAMLLKKN 402 (535)
Q Consensus 330 ~~~~~~~g~v~~~~~a~~i~~--ell~~~~DILiPaA~~~~It~--~n--a~~i~-AkiIvEgAN~p~T~eA~~iL~~rG 402 (535)
.+..++.+ ....+. +.+ .+|||+|-|...+.... .. ...++ -.+|++-+. ..|+-. +..+++|
T Consensus 166 ~~l~~~~g-------~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~-~~t~ll-~~a~~~g 235 (275)
T 2hk9_A 166 IKLAQKFP-------LEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY-KETKLL-KKAKEKG 235 (275)
T ss_dssp HHHTTTSC-------EEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS-SCCHHH-HHHHHTT
T ss_pred HHHHHHcC-------CeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC-ChHHHH-HHHHHCc
Confidence 55443332 222222 333 48999999987654321 11 22343 368888888 555543 4456799
Q ss_pred ceeeccccccccCcchhhHhhh
Q psy1913 403 VLIIPDIFANAGGVTVSYFEWL 424 (535)
Q Consensus 403 I~viPD~laNaGGVivSy~Ew~ 424 (535)
+.++|..-.-.+.-+.++..|.
T Consensus 236 ~~~v~g~~mlv~q~~~a~~~w~ 257 (275)
T 2hk9_A 236 AKLLDGLPMLLWQGIEAFKIWN 257 (275)
T ss_dssp CEEECSHHHHHHHHHHHHHHHH
T ss_pred CEEECCHHHHHHHHHHHHHHHH
Confidence 9998875444444444444443
No 28
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.14 E-value=0.0037 Score=62.79 Aligned_cols=194 Identities=11% Similarity=0.027 Sum_probs=105.9
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDK 356 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~ 356 (535)
+-++|.|.|+|++|..+|+.|.+.|..|+. .|.+.+.+.+..+. +....+. +++ .+
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~-------------~dr~~~~~~~l~~~--------g~~~~~~~~~~~-~~ 77 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTV-------------WNRTLSKCDELVEH--------GASVCESPAEVI-KK 77 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSSGGGGHHHHHT--------TCEECSSHHHHH-HH
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEE-------------EeCCHHHHHHHHHC--------CCeEcCCHHHHH-Hh
Confidence 457999999999999999999999999876 33444444444432 2232232 333 47
Q ss_pred ceEEeeccccccccccc-------cccc-cceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhc
Q psy1913 357 VDILVPAAIEKVIRKSN-------ADKV-QAKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426 (535)
Q Consensus 357 ~DILiPaA~~~~It~~n-------a~~i-~AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn 426 (535)
|||+|-|........+- .+.+ .-++|+.-.+.+ ++.+..+.+.++|+.++.-- -+|++... . ..
T Consensus 78 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~p--v~g~~~~a-~---~g 151 (310)
T 3doj_A 78 CKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGP--VSGSKKPA-E---DG 151 (310)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECC--EECCHHHH-H---HT
T ss_pred CCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCC--CCCChhHH-h---cC
Confidence 99999887643222222 2233 236777777654 33456677889999876421 22443221 1 00
Q ss_pred cccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy1913 427 ISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKS 506 (535)
Q Consensus 427 ~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~ 506 (535)
...+-.| . +++ ..+.+..+-+. +|..+....+......+ .+++.-+-..+...+.+...++++.
T Consensus 152 ~l~i~~g----g-~~~-~~~~~~~ll~~----~g~~~~~~g~~g~a~~~------Kl~~N~~~~~~~~~~~Ea~~l~~~~ 215 (310)
T 3doj_A 152 QLIILAA----G-DKA-LFEESIPAFDV----LGKRSFYLGQVGNGAKM------KLIVNMIMGSMMNAFSEGLVLADKS 215 (310)
T ss_dssp CEEEEEE----E-CHH-HHHHHHHHHHH----HEEEEEECSSTTHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEc----C-CHH-HHHHHHHHHHH----hCCCEEEeCCcCHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0000000 1 221 11122222111 22211111112222222 2677778888888899999999998
Q ss_pred CCCCCHHHHHhH
Q psy1913 507 DNKLDLRNAAYC 518 (535)
Q Consensus 507 ~~~~~lR~AAy~ 518 (535)
+ +|..+..-+
T Consensus 216 G--~d~~~~~~~ 225 (310)
T 3doj_A 216 G--LSSDTLLDI 225 (310)
T ss_dssp T--SCHHHHHHH
T ss_pred C--CCHHHHHHH
Confidence 5 676655433
No 29
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.13 E-value=0.0011 Score=66.21 Aligned_cols=189 Identities=15% Similarity=0.179 Sum_probs=104.7
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKV 357 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~ 357 (535)
.++|+|.|+|++|..+|+.|.+.|..|++ .|.+.+.+.+..+. +....+. ++.. |
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~-------------~dr~~~~~~~~~~~--------g~~~~~~~~~~~~--a 71 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTV-------------YDIRIEAMTPLAEA--------GATLADSVADVAA--A 71 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEE-------------ECSSTTTSHHHHHT--------TCEECSSHHHHTT--S
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEE-------------EeCCHHHHHHHHHC--------CCEEcCCHHHHHh--C
Confidence 36899999999999999999999999876 22333334343332 2333333 4555 9
Q ss_pred eEEeeccccccccccc----cccc-cceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccccc
Q psy1913 358 DILVPAAIEKVIRKSN----ADKV-QAKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHS 430 (535)
Q Consensus 358 DILiPaA~~~~It~~n----a~~i-~AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~ 430 (535)
|++|-|........+- .+.+ .-++|+...+.+ ++.+..+.+.++|+.++.- --+||... .+. ..+. +
T Consensus 72 Dvvi~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~--pv~g~~~~--a~~-g~l~-~ 145 (296)
T 3qha_A 72 DLIHITVLDDAQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDA--PVSGGAAA--AAR-GELA-T 145 (296)
T ss_dssp SEEEECCSSHHHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEEC--CEESCHHH--HHH-TCEE-E
T ss_pred CEEEEECCChHHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeC--CCcCCHHH--Hhc-CCcc-E
Confidence 9999998754322222 2223 236777777665 3445667788899987632 12333321 110 0000 0
Q ss_pred cccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy1913 431 SLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKL 510 (535)
Q Consensus 431 ~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~ 510 (535)
--| . +++ ..+.+..+.+.+ +.++....+......+ .+++.-+...+...+.+...++++.+ +
T Consensus 146 ~~g----g-~~~-~~~~~~~ll~~~----g~~~~~~g~~g~a~~~------Kl~~N~~~~~~~~~~~E~~~l~~~~G--~ 207 (296)
T 3qha_A 146 MVG----A-DRE-VYERIKPAFKHW----AAVVIHAGEPGAGTRM------KLARNMLTFTSYAAACEAMKLAEAAG--L 207 (296)
T ss_dssp EEE----C-CHH-HHHHHHHHHHHH----EEEEEEEESTTHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHTT--C
T ss_pred Eec----C-CHH-HHHHHHHHHHHH----cCCeEEcCChhHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHcC--C
Confidence 000 1 222 112222222211 2211111112222222 37888888888999999999999985 7
Q ss_pred CHHHH
Q psy1913 511 DLRNA 515 (535)
Q Consensus 511 ~lR~A 515 (535)
|..+.
T Consensus 208 d~~~~ 212 (296)
T 3qha_A 208 DLQAL 212 (296)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 87665
No 30
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.11 E-value=0.00071 Score=70.24 Aligned_cols=114 Identities=14% Similarity=0.311 Sum_probs=77.1
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD 355 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~ 355 (535)
++.++|.|+|+|++|..+|+.|.+.|..|++ .|.+.+.+.+..+. +....+. +++ .
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v-------------~dr~~~~~~~l~~~--------g~~~~~s~~e~~-~ 77 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVV-------------YDLNVNAVQALERE--------GIAGARSIEEFC-A 77 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHTT--------TCBCCSSHHHHH-H
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEE-------------EeCCHHHHHHHHHC--------CCEEeCCHHHHH-h
Confidence 3568999999999999999999999999887 45677776665543 1222222 333 2
Q ss_pred cc---eEEeecccccccccccccc----c-cceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCc
Q psy1913 356 KV---DILVPAAIEKVIRKSNADK----V-QAKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGV 416 (535)
Q Consensus 356 ~~---DILiPaA~~~~It~~na~~----i-~AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGV 416 (535)
.| ||+|-|.... ...+-+.. + .-.+|+...|.+ .+.+..+.|.++|+.+++- --+||.
T Consensus 78 ~a~~~DvVi~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda--pVsGg~ 145 (358)
T 4e21_A 78 KLVKPRVVWLMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV--GTSGGI 145 (358)
T ss_dssp HSCSSCEEEECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE--EEECGG
T ss_pred cCCCCCEEEEeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC--CCCCCH
Confidence 45 9999997766 22322222 3 247899999887 3456667889999998753 334554
No 31
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.10 E-value=0.0013 Score=68.36 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=75.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
+|.|+||.|.|+|++|+.+|+.|...|++|++ ||+.. .+.+...+ . +.+.++. +++
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~--------~dr~~--~~~~~~~~----~-------g~~~~~~l~ell- 218 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLY--------HDRLQ--MAPELEKE----T-------GAKFVEDLNEML- 218 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCEEEE--------ECSSC--CCHHHHHH----H-------CCEECSCHHHHG-
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCEEEE--------eCCCc--cCHHHHHh----C-------CCeEcCCHHHHH-
Confidence 58999999999999999999999999999886 55555 44443322 1 2233333 444
Q ss_pred ccceEEeecccc-----cccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 355 DKVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
..|||++-|..- +.|+.+....++ -.+++.-|.+++ . ....+.|.+..|.
T Consensus 219 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 276 (351)
T 3jtm_A 219 PKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIG 276 (351)
T ss_dssp GGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCcc
Confidence 479999988763 356666556665 479999999984 3 3445678887775
No 32
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.07 E-value=0.0048 Score=66.37 Aligned_cols=197 Identities=13% Similarity=0.042 Sum_probs=113.1
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD 355 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~ 355 (535)
+..++|.|.|.|++|..+|+.|.+.|..|+. .|.+.+.+.+..++.+ + .+....+. ++...
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v-------------~~r~~~~~~~l~~~~~---~-~gi~~~~s~~e~v~~ 75 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSI-------------FNRSREKTEEVIAENP---G-KKLVPYYTVKEFVES 75 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEE-------------ECSSHHHHHHHHHHST---T-SCEEECSSHHHHHHT
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEE-------------EeCCHHHHHHHHhhCC---C-CCeEEeCCHHHHHhC
Confidence 4678999999999999999999999999876 3356677766665432 0 12222222 33322
Q ss_pred --cceEEeecccccccccccc----cccc-ceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhc
Q psy1913 356 --KVDILVPAAIEKVIRKSNA----DKVQ-AKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426 (535)
Q Consensus 356 --~~DILiPaA~~~~It~~na----~~i~-AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn 426 (535)
+||++|-|........+.+ +.++ -.+|+..+|+. .|.+..+.|.++|+.++. ...+||... .++
T Consensus 76 l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~--~pv~gg~~~-----a~~ 148 (480)
T 2zyd_A 76 LETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIG--TGVSGGEEG-----ALK 148 (480)
T ss_dssp BCSSCEEEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE--EEEESHHHH-----HHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeC--CccccCHhH-----Hhc
Confidence 4999998877643333333 3333 36999999997 345566778889998873 244555422 111
Q ss_pred cccccccccccccchhhHHHHHHhhhhhhhhhhhhh-------hhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHH
Q psy1913 427 ISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKK-------IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDI 499 (535)
Q Consensus 427 ~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~-------~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v 499 (535)
-..+..| . +++ ..+.+..+ +.. ++.+ .....+.-.... ...++..+...+..++.+.
T Consensus 149 g~~i~~g----g-~~~-~~~~v~~l---l~~-~g~~~~dGe~~v~~~g~~G~g~~------~Kl~~N~~~~~~~~~laEa 212 (480)
T 2zyd_A 149 GPSIMPG----G-QKE-AYELVAPI---LTK-IAAVAEDGEPCVTYIGADGAGHY------VKMVHNGIEYGDMQLIAEA 212 (480)
T ss_dssp CCEEEEE----S-CHH-HHHHHHHH---HHH-HSCBCTTSCBSBCCCBSTTHHHH------HHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEec----C-CHH-HHHHHHHH---HHH-HhccccCCCceEEEECCccHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 1111111 1 221 11222221 111 1111 111111111122 2367888899999999999
Q ss_pred HHHHHH-cCCCCCHHHHH
Q psy1913 500 LEYAEK-SDNKLDLRNAA 516 (535)
Q Consensus 500 ~~~a~~-~~~~~~lR~AA 516 (535)
..++++ .+ +|..+..
T Consensus 213 ~~l~~~~lG--l~~~~~~ 228 (480)
T 2zyd_A 213 YSLLKGGLN--LTNEELA 228 (480)
T ss_dssp HHHHHHHHC--CCHHHHH
T ss_pred HHHHHHhcC--CCHHHHH
Confidence 999999 66 6766554
No 33
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.02 E-value=0.00041 Score=71.24 Aligned_cols=105 Identities=16% Similarity=0.211 Sum_probs=68.9
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|++|.|+|+|++|+.+|+.|...|++|++ ||++. +.+ ...+.| ....+. +++ .
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~--------~d~~~---~~~----~~~~~g-------~~~~~l~e~l-~ 199 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYY--------WSRHR---KVN----VEKELK-------ARYMDIDELL-E 199 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEE--------ECSSC---CHH----HHHHHT-------EEECCHHHHH-H
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEE--------ECCCc---chh----hhhhcC-------ceecCHHHHH-h
Confidence 68999999999999999999999999999876 34433 211 111222 121221 333 4
Q ss_pred cceEEeeccccc-----cccccccccccceEEEecCCCCCC-HH-HHHHHHhCCce
Q psy1913 356 KVDILVPAAIEK-----VIRKSNADKVQAKIIVEAANGPLT-PA-AHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~~~-----~It~~na~~i~AkiIvEgAN~p~T-~e-A~~iL~~rGI~ 404 (535)
+||+++.|...+ .|+.+....++..+++..+.+++. .+ ..+.|.+..|.
T Consensus 200 ~aDiVil~vp~~~~t~~~i~~~~~~~mk~gilin~srg~~vd~~aL~~aL~~~~i~ 255 (333)
T 2d0i_A 200 KSDIVILALPLTRDTYHIINEERVKKLEGKYLVNIGRGALVDEKAVTEAIKQGKLK 255 (333)
T ss_dssp HCSEEEECCCCCTTTTTSBCHHHHHHTBTCEEEECSCGGGBCHHHHHHHHHTTCBC
T ss_pred hCCEEEEcCCCChHHHHHhCHHHHhhCCCCEEEECCCCcccCHHHHHHHHHcCCce
Confidence 899999998765 444333444543388899998854 33 34667776554
No 34
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.01 E-value=0.001 Score=68.39 Aligned_cols=106 Identities=16% Similarity=0.218 Sum_probs=73.7
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|+||.|.|+|++|+.+|+.|...|++|++ ||+.. .+.+...+ .| .+..+. +++ .
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~--------~d~~~--~~~~~~~~----~g-------~~~~~l~ell-~ 199 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGATLQY--------HEAKA--LDTQTEQR----LG-------LRQVACSELF-A 199 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCCEEEE--------ECSSC--CCHHHHHH----HT-------EEECCHHHHH-H
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE--------ECCCC--CcHhHHHh----cC-------ceeCCHHHHH-h
Confidence 58899999999999999999999999999987 55554 34332221 11 222222 444 4
Q ss_pred cceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 356 KVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
.|||++-|.. .+.|+.+....++ -.+|+..|.+++ . ....+.|.+.+|.
T Consensus 200 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 200 SSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCcc
Confidence 7999998876 3456666666665 468999999984 3 3445678887775
No 35
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.99 E-value=0.0034 Score=62.03 Aligned_cols=190 Identities=14% Similarity=0.093 Sum_probs=103.7
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|.|.|+|++|..+|+.|.+.|..|++ .|.+.+.+.+..+. +....+. +++ .+||
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~-------------~dr~~~~~~~~~~~--------g~~~~~~~~~~~-~~ad 59 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTV-------------WNRNPAKCAPLVAL--------GARQASSPAEVC-AACD 59 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEE-------------ECSSGGGGHHHHHH--------TCEECSCHHHHH-HHCS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEE-------------EcCCHHHHHHHHHC--------CCeecCCHHHHH-HcCC
Confidence 4799999999999999999999999876 33444444444433 2222232 332 4799
Q ss_pred EEeecccccccccc-------ccccc-cceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccc
Q psy1913 359 ILVPAAIEKVIRKS-------NADKV-QAKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNIS 428 (535)
Q Consensus 359 ILiPaA~~~~It~~-------na~~i-~AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~ 428 (535)
++|-|........+ -.+.+ .-++|+...+.+ ++.+..+.+.++|+.++.- -..|+... .+ .
T Consensus 60 vvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~--pv~g~~~~--a~--~--- 130 (287)
T 3pdu_A 60 ITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA--PVSGTKKP--AE--D--- 130 (287)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC--CEECCHHH--HH--H---
T ss_pred EEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC--CccCCHHH--Hh--c---
Confidence 99999876522222 12333 236777777654 2345566788899887632 23344311 11 0
Q ss_pred ccccccccc--ccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy1913 429 HSSLGRMSF--GYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKS 506 (535)
Q Consensus 429 ~~~~grl~~--~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~ 506 (535)
|.+.. .-+++ ..+.+..+-+. ++.++....+......+ .+++.-+-..+...+.+...++++.
T Consensus 131 ----g~l~~~~gg~~~-~~~~~~~ll~~----~g~~~~~~g~~g~~~~~------Kl~~N~~~~~~~~~~~Ea~~l~~~~ 195 (287)
T 3pdu_A 131 ----GTLIILAAGDQS-LFTDAGPAFAA----LGKKCLHLGEVGQGARM------KLVVNMIMGQMMTALGEGMALGRNC 195 (287)
T ss_dssp ----TCEEEEEEECHH-HHHHTHHHHHH----HEEEEEECSSTTHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----CCEEEEEeCCHH-HHHHHHHHHHH----hCCCEEEcCCCChHHHH------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11110 00221 11112221111 22211111112222222 2677777888888899999999998
Q ss_pred CCCCCHHHHHhH
Q psy1913 507 DNKLDLRNAAYC 518 (535)
Q Consensus 507 ~~~~~lR~AAy~ 518 (535)
+ +|..+..=+
T Consensus 196 G--~~~~~~~~~ 205 (287)
T 3pdu_A 196 G--LDGGQLLEV 205 (287)
T ss_dssp T--CCHHHHHHH
T ss_pred C--CCHHHHHHH
Confidence 5 676654433
No 36
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=96.97 E-value=0.0013 Score=68.51 Aligned_cols=168 Identities=16% Similarity=0.126 Sum_probs=100.2
Q ss_pred cccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHHHhcH----HHHHH--h
Q psy1913 199 DVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEILVNNE----EYMCE--I 272 (535)
Q Consensus 199 dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~l~~~----~~~~~--~ 272 (535)
.|-....|++.=++++..+.. .|- .||.-|- ....+++-.++..+.++.++- ..++. |
T Consensus 87 ~I~~~~~G~d~id~~~~~~~~---~gI-------~V~n~pg------~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W 150 (364)
T 2j6i_A 87 LVVVAGVGSDHIDLDYINQTG---KKI-------SVLEVTG------SNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDW 150 (364)
T ss_dssp EEEESSSCCTTBCHHHHHHHT---CCC-------EEEECTT------SSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC
T ss_pred EEEECCcccccccHHHHHhcC---CCE-------EEEECCC------cCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCC
Confidence 345556677766676654320 022 2444441 123566666666666555531 11110 0
Q ss_pred ------CCCCCCCCcEEEEEccccHHHHHHHHHHHCCCe-EEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCC
Q psy1913 273 ------GLEPCMENKTYIVQGFGNVGFHAARYFRRGRAK-CLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGT 345 (535)
Q Consensus 273 ------g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Gak-VVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a 345 (535)
....++.|+||.|+|+|++|+.+|+.|...|++ |++ ||+.. ...+.. .+.| .
T Consensus 151 ~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~--------~d~~~--~~~~~~----~~~g-------~ 209 (364)
T 2j6i_A 151 EVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLY--------YDYQA--LPKDAE----EKVG-------A 209 (364)
T ss_dssp CHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEE--------ECSSC--CCHHHH----HHTT-------E
T ss_pred CcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEE--------ECCCc--cchhHH----HhcC-------c
Confidence 012368999999999999999999999999997 876 44443 333321 2222 2
Q ss_pred cccCC--CCccccceEEeecccc-----cccccccccccc-ceEEEecCCCC-CCH-HHHHHHHhCCce
Q psy1913 346 KSAPT--DIMFDKVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGP-LTP-AAHAMLLKKNVL 404 (535)
Q Consensus 346 ~~i~~--ell~~~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p-~T~-eA~~iL~~rGI~ 404 (535)
...+. +++ ..|||++.|... +.|+.+....++ -.+|+..|.++ +.. +..+.|.+.+|.
T Consensus 210 ~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 210 RRVENIEELV-AQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLR 277 (364)
T ss_dssp EECSSHHHHH-HTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred EecCCHHHHH-hcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCc
Confidence 22222 444 389999999875 456555556665 36788888887 443 455678887765
No 37
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.97 E-value=0.0012 Score=66.41 Aligned_cols=110 Identities=8% Similarity=0.055 Sum_probs=74.3
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
.+..++|.|+|+|++|..+|+.|.+.|.+|++ .|.+.+.+.+..+. | ....+. +++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~-------------~dr~~~~~~~~~~~-g-------~~~~~~~~e~~- 63 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAI-------------WNRSPGKAAALVAA-G-------AHLCESVKAAL- 63 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSSHHHHHHHHHH-T-------CEECSSHHHHH-
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHHC-C-------CeecCCHHHHH-
Confidence 35678999999999999999999999999887 45777777666554 2 222222 333
Q ss_pred ccceEEeecccccccccc-----ccccc-cceEEEecCCCCC--CHHHHHHHHhCCceeecc
Q psy1913 355 DKVDILVPAAIEKVIRKS-----NADKV-QAKIIVEAANGPL--TPAAHAMLLKKNVLIIPD 408 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~-----na~~i-~AkiIvEgAN~p~--T~eA~~iL~~rGI~viPD 408 (535)
.+|||+|-|........+ ....+ .-++|+.-.+... +.+..+.+.++|+.|+.-
T Consensus 64 ~~aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 64 SASPATIFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp HHSSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred hcCCEEEEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 479999998765432221 12112 3467777776653 345567788999988753
No 38
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.95 E-value=0.00071 Score=68.21 Aligned_cols=187 Identities=8% Similarity=-0.011 Sum_probs=100.8
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccceE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVDI 359 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~DI 359 (535)
++|.++|+|++|..+|+.|.+.|++|++ .|.+.+.+.++.+. +++..+. .=+..+|||
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v-------------~dr~~~~~~~l~~~--------G~~~~~s~~e~~~~~dv 64 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVV-------------WNRTASKAEPLTKL--------GATVVENAIDAITPGGI 64 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEE-------------C-------CTTTTT--------TCEECSSGGGGCCTTCE
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEE-------------EeCCHHHHHHHHHc--------CCeEeCCHHHHHhcCCc
Confidence 5899999999999999999999999987 44554444333221 3444433 223358999
Q ss_pred Eeecccccccc-----cccccccc-ceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhcccccc
Q psy1913 360 LVPAAIEKVIR-----KSNADKVQ-AKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHSS 431 (535)
Q Consensus 360 LiPaA~~~~It-----~~na~~i~-AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~~ 431 (535)
++-|-...... .+-+..++ -.+|++..+.. ++.+..+.+.++|+.|+=-- -+||....-.. .+. +-
T Consensus 65 vi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldap--VsGg~~~a~~g---~l~-im 138 (297)
T 4gbj_A 65 VFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAP--IFARPEAVRAK---VGN-IC 138 (297)
T ss_dssp EEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECC--EECCHHHHHHT---CCE-EE
T ss_pred eeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCC--cCCCccccccc---cce-ee
Confidence 99886643322 22222222 35777777654 45677788999999987322 23443221100 000 00
Q ss_pred ccccccccch---hhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q psy1913 432 LGRMSFGYDK---EISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDN 508 (535)
Q Consensus 432 ~grl~~~~~~---~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~ 508 (535)
. .-++ ++.+.+++.+.+.+..+ | .+.-... -..+++.-+...+..++.+.+.++++.+
T Consensus 139 ~-----gG~~~~~~~~~~~l~~~g~~i~~~-g------~~~G~g~------~~Kl~~N~~~~~~~~~~aEa~~la~~~G- 199 (297)
T 4gbj_A 139 L-----SGNAGAKERIKPIVENFVKGVFDF-G------DDPGAAN------VIKLAGNFMIACSLEMMGEAFTMAEKNG- 199 (297)
T ss_dssp E-----EECHHHHHHHHHHHHTTCSEEEEC-C------SCTTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred c-----ccchhHHHHHHHHHHHhhCCeEEe-c------CCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 0 1112 12222222221111000 0 0111122 2336888888888888888888888885
Q ss_pred CCCHHH
Q psy1913 509 KLDLRN 514 (535)
Q Consensus 509 ~~~lR~ 514 (535)
+|+.+
T Consensus 200 -ld~~~ 204 (297)
T 4gbj_A 200 -ISRQS 204 (297)
T ss_dssp -CCHHH
T ss_pred -CCHHH
Confidence 67654
No 39
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.94 E-value=0.0043 Score=67.07 Aligned_cols=197 Identities=12% Similarity=0.093 Sum_probs=113.7
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcc--cCC--CCccc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKS--APT--DIMFD 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~--i~~--ell~~ 355 (535)
.++|.|+|+|++|..+|+.|.+.|.+|++ .|.+.+.+.+..+... .+... .+. ++...
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v-------------~dr~~~~~~~l~~~g~-----~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCA-------------FNRTVSKVDDFLANEA-----KGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSSTHHHHHHHHTTT-----TTSSCEECSSHHHHHHT
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHhccc-----CCCceeccCCHHHHHhh
Confidence 46899999999999999999999999887 4456666666655421 01111 122 34332
Q ss_pred --cceEEeeccccccccccc----cccc-cceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhc
Q psy1913 356 --KVDILVPAAIEKVIRKSN----ADKV-QAKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKN 426 (535)
Q Consensus 356 --~~DILiPaA~~~~It~~n----a~~i-~AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn 426 (535)
+||+++-|...+....+. ++.+ .-.+|+...|.. .|.+..+.|.++|+.++.- .-+||..- ..+
T Consensus 66 l~~aDvVil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~--pVsGg~~g-----A~~ 138 (484)
T 4gwg_A 66 LKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGS--GVSGGEEG-----ARY 138 (484)
T ss_dssp BCSSCEEEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE--EEESHHHH-----HHH
T ss_pred ccCCCEEEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccC--CccCCHHH-----Hhc
Confidence 699999887765333332 2333 247999999987 3455567789999988742 33444321 111
Q ss_pred cccccccccccccchhhHHHHHHhhhhhhhhhhhh-h--hhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy1913 427 ISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNK-K--IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYA 503 (535)
Q Consensus 427 ~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~-~--~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a 503 (535)
-..+-.| . +++ ..+.+..+-+.+....+. . ....-+.-....+ ..|+..++..+..++.+.+.++
T Consensus 139 G~~im~G----G-~~e-a~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~v------Kmv~N~i~~~~m~~iaEa~~l~ 206 (484)
T 4gwg_A 139 GPSLMPG----G-NKE-AWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFV------KMVHNGIEYGDMQLICEAYHLM 206 (484)
T ss_dssp CCEEEEE----E-CGG-GHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHH------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeecC----C-CHH-HHHHHHHHHHHhcCcccCCCceEEEECCccHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1 221 222222222222111000 0 0001112223333 3799999999999999999999
Q ss_pred HH-cCCCCCHHHH
Q psy1913 504 EK-SDNKLDLRNA 515 (535)
Q Consensus 504 ~~-~~~~~~lR~A 515 (535)
++ .+ +|..+-
T Consensus 207 ~~~~G--ld~~~l 217 (484)
T 4gwg_A 207 KDVLG--MAQDEM 217 (484)
T ss_dssp HHTSC--CCHHHH
T ss_pred HHhcC--CCHHHH
Confidence 98 74 676543
No 40
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.92 E-value=0.0015 Score=66.15 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=73.5
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD 355 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~ 355 (535)
...++|.|.|+|++|..+|+.|.+.|..|++ .|.+.+.+.+..+. +....+. +++ .
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~-------------~dr~~~~~~~l~~~--------g~~~~~~~~e~~-~ 86 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQV-------------WNRTPARAASLAAL--------GATIHEQARAAA-R 86 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHTT--------TCEEESSHHHHH-T
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEE-------------EcCCHHHHHHHHHC--------CCEeeCCHHHHH-h
Confidence 4568999999999999999999999999887 45677776665543 2233333 332 4
Q ss_pred cceEEeecccccccccccc------ccc-cceEEEecCCCC--CCHHHHHHHHhCCceeec
Q psy1913 356 KVDILVPAAIEKVIRKSNA------DKV-QAKIIVEAANGP--LTPAAHAMLLKKNVLIIP 407 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na------~~i-~AkiIvEgAN~p--~T~eA~~iL~~rGI~viP 407 (535)
+|||+|-|........+-. +.+ .-++|+...+.+ ++.+..+.+.++|+.++.
T Consensus 87 ~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 87 DADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp TCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 7999999987543222222 223 236777777765 345566778899998763
No 41
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.92 E-value=0.0096 Score=58.85 Aligned_cols=127 Identities=9% Similarity=0.038 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHH
Q psy1913 251 TGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLH 330 (535)
Q Consensus 251 Tg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~ 330 (535)
.+.|+..+++ ..|. +++++++.|.|.|.+|+.+++.|.+.|++|+. .+-+.+.+.
T Consensus 102 D~~G~~~~L~----------~~~~--~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v-------------~~R~~~~~~ 156 (271)
T 1nyt_A 102 DGVGLLSDLE----------RLSF--IRPGLRILLIGAGGASRGVLLPLLSLDCAVTI-------------TNRTVSRAE 156 (271)
T ss_dssp HHHHHHHHHH----------HHTC--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSSHHHHH
T ss_pred CHHHHHHHHH----------hcCc--CcCCCEEEEECCcHHHHHHHHHHHHcCCEEEE-------------EECCHHHHH
Confidence 5888877776 2354 47899999999999999999999999998876 336666666
Q ss_pred HHHHHcCCcccCCCCcccCCCCcc-ccceEEeeccccccccc---cccccc-cceEEEecCCCC-CCHHHHHHHHhCCce
Q psy1913 331 TYKITKGTIKGYPGTKSAPTDIMF-DKVDILVPAAIEKVIRK---SNADKV-QAKIIVEAANGP-LTPAAHAMLLKKNVL 404 (535)
Q Consensus 331 ~~~~~~g~v~~~~~a~~i~~ell~-~~~DILiPaA~~~~It~---~na~~i-~AkiIvEgAN~p-~T~eA~~iL~~rGI~ 404 (535)
+..++.+.. ......+.+-+. ..+||+|-|+.-..-.. -....+ ...+|++-.-+| .|+.. +..+++|+.
T Consensus 157 ~la~~~~~~---~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~t~~~-~~a~~~G~~ 232 (271)
T 1nyt_A 157 ELAKLFAHT---GSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFL-AWCEQRGSK 232 (271)
T ss_dssp HHHHHTGGG---SSEEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHH-HHHHHTTCC
T ss_pred HHHHHhhcc---CCeeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccCCcCCHHH-HHHHHcCCC
Confidence 666553321 001111111112 47999999987443210 011112 236888888888 46654 557889986
Q ss_pred -ee
Q psy1913 405 -II 406 (535)
Q Consensus 405 -vi 406 (535)
++
T Consensus 233 ~~~ 235 (271)
T 1nyt_A 233 RNA 235 (271)
T ss_dssp EEE
T ss_pred eec
Confidence 54
No 42
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.90 E-value=0.0051 Score=64.78 Aligned_cols=108 Identities=15% Similarity=0.250 Sum_probs=78.8
Q ss_pred HHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCC--CCHHHHHHHH-HHcCCcccCCCCc
Q psy1913 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTE--INYKDLHTYK-ITKGTIKGYPGTK 346 (535)
Q Consensus 270 ~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~d--LDi~~L~~~~-~~~g~v~~~~~a~ 346 (535)
+..|. +++..+|+|.|.|.+|..+|++|...|++=|-+.|++|.|+.... | |+. +.+.. ++... + .
T Consensus 184 ~i~g~--~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~-~~~L~~--~k~~~A~~~~~---~---~ 252 (388)
T 1vl6_A 184 KLTEK--KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDP-ETCLNE--YHLEIARITNP---E---R 252 (388)
T ss_dssp HHHTC--CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSG-GGCSSH--HHHHHHHTSCT---T---C
T ss_pred HHhCC--CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCc-ccccCH--HHHHHHHhhhc---c---C
Confidence 34564 589999999999999999999999999977779999999997663 3 443 22222 22211 1 0
Q ss_pred ccCC--CCccccceEEeeccccccccccccccccc-eEEEecCCCCC
Q psy1913 347 SAPT--DIMFDKVDILVPAAIEKVIRKSNADKVQA-KIIVEAANGPL 390 (535)
Q Consensus 347 ~i~~--ell~~~~DILiPaA~~~~It~~na~~i~A-kiIvEgAN~p~ 390 (535)
.... +.+ ..+||||=++.++++|++-+.+++- .+|.+-|| |+
T Consensus 253 ~~~~L~eav-~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN-Pt 297 (388)
T 1vl6_A 253 LSGDLETAL-EGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN-PV 297 (388)
T ss_dssp CCSCHHHHH-TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS-SS
T ss_pred chhhHHHHH-ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC-CC
Confidence 1111 223 3589999999999999999998853 49999999 53
No 43
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=96.88 E-value=0.0017 Score=65.60 Aligned_cols=105 Identities=11% Similarity=0.178 Sum_probs=75.4
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccceE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVDI 359 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~DI 359 (535)
++|.++|+|++|...|+.|.+.|+.|++ .|.+.+.+..+.+. +++..+. .=+...|||
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v-------------~dr~~~~~~~l~~~--------Ga~~a~s~~e~~~~~dv 62 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNV-------------FDLVQSAVDGLVAA--------GASAARSARDAVQGADV 62 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEE-------------ECSSHHHHHHHHHT--------TCEECSSHHHHHTTCSE
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEE-------------EcCCHHHHHHHHHc--------CCEEcCCHHHHHhcCCc
Confidence 4899999999999999999999999987 55777887777654 3443333 223358999
Q ss_pred Eeeccc-----cccccccc--ccccc-ceEEEecCCCC--CCHHHHHHHHhCCceee
Q psy1913 360 LVPAAI-----EKVIRKSN--ADKVQ-AKIIVEAANGP--LTPAAHAMLLKKNVLII 406 (535)
Q Consensus 360 LiPaA~-----~~~It~~n--a~~i~-AkiIvEgAN~p--~T~eA~~iL~~rGI~vi 406 (535)
++-|-. +.++...+ +..++ -++|++..+.. .+.+..+.|.++|+.|+
T Consensus 63 v~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l 119 (300)
T 3obb_A 63 VISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (300)
T ss_dssp EEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred eeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 998864 33333322 23333 37888888775 56777888999999987
No 44
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.84 E-value=0.0048 Score=64.67 Aligned_cols=108 Identities=20% Similarity=0.317 Sum_probs=69.6
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCC-eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc--CC--CC
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA--PT--DI 352 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i--~~--el 352 (535)
+.|++|.|.|+|.+|..+++.|...|+ +|++ .+-+.+.+.+..++.|. ..+ +. ++
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v-------------~~r~~~ra~~la~~~g~-------~~~~~~~l~~~ 224 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLV-------------ANRTYERAVELARDLGG-------EAVRFDELVDH 224 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEE-------------ECSSHHHHHHHHHHHTC-------EECCGGGHHHH
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEE-------------EeCCHHHHHHHHHHcCC-------ceecHHhHHHH
Confidence 679999999999999999999999999 7776 33455555555554431 111 11 22
Q ss_pred ccccceEEeecccc--cccccccccc-c------cceEEEecCCCC-CCHHHHHHHHhCCcee--eccc
Q psy1913 353 MFDKVDILVPAAIE--KVIRKSNADK-V------QAKIIVEAANGP-LTPAAHAMLLKKNVLI--IPDI 409 (535)
Q Consensus 353 l~~~~DILiPaA~~--~~It~~na~~-i------~AkiIvEgAN~p-~T~eA~~iL~~rGI~v--iPD~ 409 (535)
+ ..+||+|-|+.. ..++.+.... + .-.++++.+..+ ++|+. +.-.||.+ +||+
T Consensus 225 l-~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~~i~~~l---~~l~~v~l~d~d~l 289 (404)
T 1gpj_A 225 L-ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGV---ENIEDVEVRTIDDL 289 (404)
T ss_dssp H-HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTG---GGSTTEEEEEHHHH
T ss_pred h-cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCCCCCccc---cccCCeEEEeHhhH
Confidence 3 479999999763 2334344444 2 235788888732 45543 33467776 6765
No 45
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=96.81 E-value=0.0026 Score=66.05 Aligned_cols=105 Identities=15% Similarity=0.206 Sum_probs=72.3
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
+|.|+||.|.|+|++|+.+|+.|...|++|++ || -+... +...+. +.+.++. +++
T Consensus 157 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d-----~~~~~--~~~~~~-------g~~~~~~l~ell- 213 (352)
T 3gg9_A 157 VLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLV--------WG-----RENSK--ERARAD-------GFAVAESKDALF- 213 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE--------EC-----SHHHH--HHHHHT-------TCEECSSHHHHH-
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE--------EC-----CCCCH--HHHHhc-------CceEeCCHHHHH-
Confidence 58899999999999999999999999999998 22 22111 111222 2333433 444
Q ss_pred ccceEEeeccc-----ccccccccccccc-ceEEEecCCCCC--CHHHHHHHHhCCce
Q psy1913 355 DKVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL--TPAAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~--T~eA~~iL~~rGI~ 404 (535)
..|||++-|.. .+.|+.+....++ -.+++..+.+++ +....+.|.+..|.
T Consensus 214 ~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 271 (352)
T 3gg9_A 214 EQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPG 271 (352)
T ss_dssp HHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSS
T ss_pred hhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCcc
Confidence 47999998875 3455555556665 468899999984 44556778888774
No 46
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=96.76 E-value=0.0013 Score=66.68 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=69.2
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|++|.|+|+|++|+.+|+.|...|++|++ ||+.. +.+ ...+.| .+..+. +++ .
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~--------~d~~~---~~~----~~~~~g-------~~~~~l~ell-~ 195 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANALGMNILL--------YDPYP---NEE----RAKEVN-------GKFVDLETLL-K 195 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC---CHH----HHHHTT-------CEECCHHHHH-H
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHCCCEEEE--------ECCCC---Chh----hHhhcC-------ccccCHHHHH-h
Confidence 68999999999999999999999999999987 44433 221 112222 222222 444 3
Q ss_pred cceEEeecccc-----cccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q psy1913 356 KVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI~ 404 (535)
.|||++.|... +.|+.+....++ -.+++.-+-+++ .. +..+.|.+..|.
T Consensus 196 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 196 ESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 89999999763 345544555554 357777777774 43 345677776653
No 47
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=96.75 E-value=0.011 Score=63.58 Aligned_cols=198 Identities=13% Similarity=0.070 Sum_probs=108.9
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc--c
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD--K 356 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~--~ 356 (535)
++|+|.|.|++|..+|..|.+.|..|+. .|.+.+.+.+..++.|....-.+....+. ++... +
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v-------------~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~ 68 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAV-------------FNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKK 68 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccC
Confidence 4799999999999999999999998876 33556677666655442100000111122 33332 5
Q ss_pred ceEEeecccccccccccccc----cc-ceEEEecCCCCC--CHHHHHHHHhCCceeeccccccccCcchhhHhhhhcccc
Q psy1913 357 VDILVPAAIEKVIRKSNADK----VQ-AKIIVEAANGPL--TPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISH 429 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~----i~-AkiIvEgAN~p~--T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~ 429 (535)
||+++-|.....-..+-+.. ++ -++|+...|+.. +.+..+.|.++|+.++. ...+||.. ..+.-..
T Consensus 69 aDvVilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~--~pv~gg~~-----~a~~g~~ 141 (478)
T 1pgj_A 69 PRKALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG--MGISGGEE-----GARKGPA 141 (478)
T ss_dssp SCEEEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE--EEEESHHH-----HHHHCCE
T ss_pred CCEEEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEE--eeccCCHH-----HHhcCCe
Confidence 99999998765322333332 32 368999999872 44555678888988763 23344432 1111111
Q ss_pred ccccccccccchhhHHHHHHhhhhhhhhhhhhh-------hhhcchhhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHH
Q psy1913 430 SSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKK-------IRIQKSAMYEDRISNATEKDIVQSSLTHSMQRAGRDILEY 502 (535)
Q Consensus 430 ~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~-------~~~~~~~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~ 502 (535)
+..| . +++ ..+.+..+-+.+ +.+ .....+...... ...++..+...+...+.+...+
T Consensus 142 i~~g----g-~~~-~~~~v~~ll~~~----g~~~~dg~~~v~~~g~~G~g~~------~Kl~~N~~~~~~~~~i~Ea~~l 205 (478)
T 1pgj_A 142 FFPG----G-TLS-VWEEIRPIVEAA----AAKADDGRPCVTMNGSGGAGSC------VKMYHNSGEYAILQIWGEVFDI 205 (478)
T ss_dssp EEEE----E-CHH-HHHHHHHHHHHH----SCBCTTSCBSCCCCCSTTHHHH------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eecc----C-CHH-HHHHHHHHHHHh----cccccCCCeeEEEeCCchHHHH------HhhHHHHHHHHHHHHHHHHHHH
Confidence 1111 1 221 122222221111 111 001111111111 2356778888889999999999
Q ss_pred HHHcCCCCCHHHHH
Q psy1913 503 AEKSDNKLDLRNAA 516 (535)
Q Consensus 503 a~~~~~~~~lR~AA 516 (535)
+++.+ ++..+..
T Consensus 206 ~~~~G--~~~~~~~ 217 (478)
T 1pgj_A 206 LRAMG--LNNDEVA 217 (478)
T ss_dssp HHHTT--CCHHHHH
T ss_pred HHHcC--CCHHHHH
Confidence 99875 6765543
No 48
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.74 E-value=0.0013 Score=68.16 Aligned_cols=105 Identities=17% Similarity=0.168 Sum_probs=72.2
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++.|+||.|+|+|++|+.+|+.|...|++|++ ||+.- -. .. ....| .+.... +++
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~--------~d~~~--~~--~~---~~~~g-------~~~~~~l~ell- 221 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLF--------YDPYL--SD--GV---ERALG-------LQRVSTLQDLL- 221 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE--------ECTTS--CT--TH---HHHHT-------CEECSSHHHHH-
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEE--------ECCCc--ch--hh---HhhcC-------CeecCCHHHHH-
Confidence 58999999999999999999999999999887 34332 11 11 11122 222222 444
Q ss_pred ccceEEeeccc-----cccccccccccccc-eEEEecCCCCC-CH-HHHHHHHhCCce
Q psy1913 355 DKVDILVPAAI-----EKVIRKSNADKVQA-KIIVEAANGPL-TP-AAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~-----~~~It~~na~~i~A-kiIvEgAN~p~-T~-eA~~iL~~rGI~ 404 (535)
..|||++.|.. .+.|+.+....++. .+++.-+.+++ .. +..+.|.+++|.
T Consensus 222 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 279 (347)
T 1mx3_A 222 FHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIR 279 (347)
T ss_dssp HHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred hcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCc
Confidence 37999998865 34566666666653 68888898884 43 456778888876
No 49
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.68 E-value=0.0014 Score=57.60 Aligned_cols=105 Identities=13% Similarity=0.129 Sum_probs=63.7
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCc----
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIM---- 353 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell---- 353 (535)
+.++|+|.|+|.+|+.+|+.|.+.|.+|++ .|.|.+.+.+..+..-.+.. + . .+. +.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~-------------id~~~~~~~~~~~~~~~~~~--g-d-~~~~~~l~~~~ 67 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLA-------------VDKSKEKIELLEDEGFDAVI--A-D-PTDESFYRSLD 67 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEE-------------EESCHHHHHHHHHTTCEEEE--C-C-TTCHHHHHHSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEE-------------EECCHHHHHHHHHCCCcEEE--C-C-CCCHHHHHhCC
Confidence 456899999999999999999999999998 44677777666543211100 0 0 111 222
Q ss_pred cccceEEeecccccccc---ccccccc-cceEEEecCCCCCCHHHHHHHHhCCce
Q psy1913 354 FDKVDILVPAAIEKVIR---KSNADKV-QAKIIVEAANGPLTPAAHAMLLKKNVL 404 (535)
Q Consensus 354 ~~~~DILiPaA~~~~It---~~na~~i-~AkiIvEgAN~p~T~eA~~iL~~rGI~ 404 (535)
-.+||++|-|......+ ...+.++ ..++|+-.. +++..+.|.+.|+.
T Consensus 68 ~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~~----~~~~~~~l~~~G~~ 118 (141)
T 3llv_A 68 LEGVSAVLITGSDDEFNLKILKALRSVSDVYAIVRVS----SPKKKEEFEEAGAN 118 (141)
T ss_dssp CTTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEEEES----CGGGHHHHHHTTCS
T ss_pred cccCCEEEEecCCHHHHHHHHHHHHHhCCceEEEEEc----ChhHHHHHHHcCCC
Confidence 24789999887643222 2333333 235555443 23445678888873
No 50
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.67 E-value=0.0042 Score=64.11 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=70.0
Q ss_pred CCCCCcEEEEEccccHHHHHHHHHH-HCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CC
Q psy1913 276 PCMENKTYIVQGFGNVGFHAARYFR-RGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DI 352 (535)
Q Consensus 276 ~~l~g~~VaIQGfGnVG~~~A~~L~-e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--el 352 (535)
.++.|++|.|+|+|++|+.+|+.|. ..|.+|++ ||++. -..+... +.| ....+. ++
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~--------~d~~~--~~~~~~~----~~g-------~~~~~~l~el 217 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVY--------YDVAP--ADAETEK----ALG-------AERVDSLEEL 217 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEE--------ECSSC--CCHHHHH----HHT-------CEECSSHHHH
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEE--------ECCCC--cchhhHh----hcC-------cEEeCCHHHH
Confidence 3689999999999999999999999 99999886 44443 2222221 111 222222 33
Q ss_pred ccccceEEeeccccc-----ccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 353 MFDKVDILVPAAIEK-----VIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 353 l~~~~DILiPaA~~~-----~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
+ .+|||++.|...+ .|+.+....++ -.+|+.-+.+++ + .+..+.|.+..|.
T Consensus 218 l-~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~ 276 (348)
T 2w2k_A 218 A-RRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLL 276 (348)
T ss_dssp H-HHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred h-ccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCce
Confidence 3 4899999997654 44444445554 357788888873 4 3455667775554
No 51
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.65 E-value=0.0039 Score=64.01 Aligned_cols=103 Identities=17% Similarity=0.311 Sum_probs=69.0
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++.|+||.|.|+|++|+.+|+.|...|++|++. |+.. -.. ..+........ +++
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~--------dr~~--~~~-------------~~~~~~~~~~~l~ell- 192 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGV--------SRSG--RER-------------AGFDQVYQLPALNKML- 192 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE--------CSSC--CCC-------------TTCSEEECGGGHHHHH-
T ss_pred ccccceEEEEEECHHHHHHHHHHHhCCCEEEEE--------cCCh--HHh-------------hhhhcccccCCHHHHH-
Confidence 588999999999999999999999999999873 3332 000 00000111111 333
Q ss_pred ccceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCc
Q psy1913 355 DKVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNV 403 (535)
Q Consensus 355 ~~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI 403 (535)
..|||++-|.. .+.|+.+....++ -.+++.-+-+++ . ....+.|.+..|
T Consensus 193 ~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i 249 (324)
T 3hg7_A 193 AQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKL 249 (324)
T ss_dssp HTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSS
T ss_pred hhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCc
Confidence 47999998866 4456666666665 468999999984 3 344567877766
No 52
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.64 E-value=0.0025 Score=54.86 Aligned_cols=106 Identities=13% Similarity=0.164 Sum_probs=60.3
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCc----c
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIM----F 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell----~ 354 (535)
.+++|+|.|+|.+|+.+++.|.+.|.+|+.+ |.+.+.+....+..+. .-+.+ ...+.+.+ -
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~-------------d~~~~~~~~~~~~~~~-~~~~~-d~~~~~~l~~~~~ 67 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIVLI-------------DIDKDICKKASAEIDA-LVING-DCTKIKTLEDAGI 67 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHHCSS-EEEES-CTTSHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEE-------------ECCHHHHHHHHHhcCc-EEEEc-CCCCHHHHHHcCc
Confidence 3579999999999999999999999998873 2455666555544331 00000 00011111 2
Q ss_pred ccceEEeeccccccccc---ccccccc-ceEEEecCCCCCCHHHHHHHHhCCc
Q psy1913 355 DKVDILVPAAIEKVIRK---SNADKVQ-AKIIVEAANGPLTPAAHAMLLKKNV 403 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~---~na~~i~-AkiIvEgAN~p~T~eA~~iL~~rGI 403 (535)
.++|++|-|+.....+. ..+..+. .++|+- +|++. ..+.|++.|+
T Consensus 68 ~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~~-~~~~~---~~~~l~~~g~ 116 (140)
T 1lss_A 68 EDADMYIAVTGKEEVNLMSSLLAKSYGINKTIAR-ISEIE---YKDVFERLGV 116 (140)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEE-CSSTT---HHHHHHHTTC
T ss_pred ccCCEEEEeeCCchHHHHHHHHHHHcCCCEEEEE-ecCHh---HHHHHHHcCC
Confidence 37899999976443222 1222232 255553 45443 3446777775
No 53
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=96.62 E-value=0.0019 Score=65.69 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=69.7
Q ss_pred CCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCcc
Q psy1913 276 PCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMF 354 (535)
Q Consensus 276 ~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~ 354 (535)
.++.|++|.|.|+|++|+.+|+.|...|++|++ ||+.. +.. . ..+.| ....+. +++
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~--------~d~~~---~~~---~-~~~~g-------~~~~~l~ell- 194 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGMKVLA--------YDILD---IRE---K-AEKIN-------AKAVSLEELL- 194 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEE--------ECSSC---CHH---H-HHHTT-------CEECCHHHHH-
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE--------ECCCc---chh---H-HHhcC-------ceecCHHHHH-
Confidence 368999999999999999999999999999987 34433 111 1 12222 222222 444
Q ss_pred ccceEEeecccc-----cccccccccccc-ceEEEecCCCC-CCH-HHHHHHHhCCce
Q psy1913 355 DKVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGP-LTP-AAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p-~T~-eA~~iL~~rGI~ 404 (535)
..|||++.|... +.|+.+....++ -.+++.-+-++ +.. ...+.|.+.+|.
T Consensus 195 ~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ 252 (313)
T 2ekl_A 195 KNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVY 252 (313)
T ss_dssp HHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEE
T ss_pred hhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCc
Confidence 389999998753 345444445554 36788877787 443 345677777663
No 54
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.60 E-value=0.0016 Score=67.11 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=71.7
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
+|.|+||.|+|+|++|+.+|+.|...|++|++ ||+.. ..... +. +.+..+. +++ .
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~--------~d~~~-----~~~~~---~~-------g~~~~~l~ell-~ 193 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLC--------YDVVK-----REDLK---EK-------GCVYTSLDELL-K 193 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC-----CHHHH---HT-------TCEECCHHHHH-H
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcCEEEE--------ECCCc-----chhhH---hc-------CceecCHHHHH-h
Confidence 58899999999999999999999999999987 45544 12111 11 1222222 444 4
Q ss_pred cceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 356 KVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
+|||++.|.. .+.|+.+....++ -.+++.-|-+++ . ....+.|.+..|.
T Consensus 194 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 194 ESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred hCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 8999998865 3456666666665 368899998884 3 3344677777664
No 55
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=96.60 E-value=0.0037 Score=64.37 Aligned_cols=105 Identities=15% Similarity=0.166 Sum_probs=70.7
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|++|.|.|+|++|+.+|+.|...|++|++ ||+.. +.. ...+.| .+..+. +++ .
T Consensus 162 ~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~---~~~----~~~~~g-------~~~~~l~ell-~ 218 (335)
T 2g76_A 162 ELNGKTLGILGLGRIGREVATRMQSFGMKTIG--------YDPII---SPE----VSASFG-------VQQLPLEEIW-P 218 (335)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE--------ECSSS---CHH----HHHHTT-------CEECCHHHHG-G
T ss_pred CCCcCEEEEEeECHHHHHHHHHHHHCCCEEEE--------ECCCc---chh----hhhhcC-------ceeCCHHHHH-h
Confidence 58999999999999999999999999999987 44443 211 112222 222222 444 4
Q ss_pred cceEEeecccc-----cccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q psy1913 356 KVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI~ 404 (535)
.|||++-|... +.|+.+....++ -.+++.-+-+++ .. +..+.|.+..|.
T Consensus 219 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 219 LCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp GCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred cCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 89999998654 345555556665 368888888884 33 345678777653
No 56
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.59 E-value=0.006 Score=64.26 Aligned_cols=106 Identities=15% Similarity=0.106 Sum_probs=71.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
+|.|++|.|.|+|++|+.+|+.|...|++|++ ||+.. ...+. ..+.| ...... +++
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~--------~d~~~--~~~~~----~~~~G-------~~~~~~l~ell- 245 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHY--------TDRHR--LPESV----EKELN-------LTWHATREDMY- 245 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCEEEE--------ECSSC--CCHHH----HHHHT-------CEECSSHHHHG-
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE--------EcCCc--cchhh----HhhcC-------ceecCCHHHHH-
Confidence 58999999999999999999999999999987 44443 22221 11222 222222 444
Q ss_pred ccceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q psy1913 355 DKVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI~ 404 (535)
..|||++-|.. .+.|+.+....++ -.+++.-+-+++ .. +..+.|.+..|.
T Consensus 246 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 246 PVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp GGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCee
Confidence 48999999876 3456655556665 368888888884 43 455677776553
No 57
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.57 E-value=0.0046 Score=67.03 Aligned_cols=109 Identities=21% Similarity=0.203 Sum_probs=73.4
Q ss_pred HHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcc
Q psy1913 268 YMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKS 347 (535)
Q Consensus 268 ~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~ 347 (535)
|.+..|. .+.|++|.|.|+|.||+.+|+.|...|++|++ .|.+.....+... . +...
T Consensus 267 w~~~~g~--~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v-------------~d~~~~~~~~a~~-~-------G~~~ 323 (494)
T 3d64_A 267 IKRATDV--MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWV-------------TEIDPICALQAAM-E-------GYRV 323 (494)
T ss_dssp HHHHHCC--CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE-------------ECSCHHHHHHHHT-T-------TCEE
T ss_pred hhhcccc--ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEE-------------EeCChHhHHHHHH-c-------CCEe
Confidence 3344553 48999999999999999999999999999998 4466554333221 1 2222
Q ss_pred cCC-CCccccceEEeeccc-ccccccccccccc-ceEEEecCCCCC--CHHHHHHHHh
Q psy1913 348 APT-DIMFDKVDILVPAAI-EKVIRKSNADKVQ-AKIIVEAANGPL--TPAAHAMLLK 400 (535)
Q Consensus 348 i~~-ell~~~~DILiPaA~-~~~It~~na~~i~-AkiIvEgAN~p~--T~eA~~iL~~ 400 (535)
.+- +++ ..|||++-|.- .+.|+.+....++ --+|+.-+-+++ ..++-+.|.+
T Consensus 324 ~~l~ell-~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL~AL~~ 380 (494)
T 3d64_A 324 VTMEYAA-DKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQW 380 (494)
T ss_dssp CCHHHHT-TTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGGTTSEE
T ss_pred CCHHHHH-hcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCcchhchHHHHhhhc
Confidence 222 444 47999999953 6678877777776 368888888875 4333344433
No 58
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.56 E-value=0.01 Score=64.19 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=66.1
Q ss_pred HHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccC
Q psy1913 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAP 349 (535)
Q Consensus 270 ~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~ 349 (535)
+..+. .+.|++|+|.|+|.+|..+|+.|...|++|+. +|.|...+.+..... ....+
T Consensus 257 r~tg~--~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv-------------~D~~~~~a~~Aa~~g--------~dv~~ 313 (488)
T 3ond_A 257 RATDV--MIAGKVAVVAGYGDVGKGCAAALKQAGARVIV-------------TEIDPICALQATMEG--------LQVLT 313 (488)
T ss_dssp HHHCC--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHTT--------CEECC
T ss_pred HHcCC--cccCCEEEEECCCHHHHHHHHHHHHCCCEEEE-------------EcCCHHHHHHHHHhC--------CccCC
Confidence 34554 47999999999999999999999999999988 567777766655431 12112
Q ss_pred C-CCccccceEEeeccc-cccccccccccccc-eEEEecCCC
Q psy1913 350 T-DIMFDKVDILVPAAI-EKVIRKSNADKVQA-KIIVEAANG 388 (535)
Q Consensus 350 ~-ell~~~~DILiPaA~-~~~It~~na~~i~A-kiIvEgAN~ 388 (535)
. +++ ..+|+++-|.. .++|+.+....++- -+|+-.+..
T Consensus 314 lee~~-~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 314 LEDVV-SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp GGGTT-TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred HHHHH-HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 2 333 47899998765 56676666666642 455566654
No 59
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.53 E-value=0.0071 Score=65.31 Aligned_cols=99 Identities=19% Similarity=0.226 Sum_probs=69.8
Q ss_pred HHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcc
Q psy1913 268 YMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKS 347 (535)
Q Consensus 268 ~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~ 347 (535)
|.+..|. .+.|++|.|.|+|.+|+.+|+.|...|++|++ .|.+.....+.... +...
T Consensus 247 w~r~~~~--~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv-------------~d~~~~~~~~a~~~--------g~~~ 303 (479)
T 1v8b_A 247 LMRATDF--LISGKIVVICGYGDVGKGCASSMKGLGARVYI-------------TEIDPICAIQAVME--------GFNV 303 (479)
T ss_dssp HHHHHCC--CCTTSEEEEECCSHHHHHHHHHHHHHTCEEEE-------------ECSCHHHHHHHHTT--------TCEE
T ss_pred hhhcccc--ccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEE-------------EeCChhhHHHHHHc--------CCEe
Confidence 3344453 58999999999999999999999999999998 55666554333321 1222
Q ss_pred cCC-CCccccceEEeecc-cccccccccccccc-ceEEEecCCCCC
Q psy1913 348 APT-DIMFDKVDILVPAA-IEKVIRKSNADKVQ-AKIIVEAANGPL 390 (535)
Q Consensus 348 i~~-ell~~~~DILiPaA-~~~~It~~na~~i~-AkiIvEgAN~p~ 390 (535)
.+- +++ ..|||++-|+ ..+.|+.+....++ -.+|+.-+-+++
T Consensus 304 ~~l~ell-~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 304 VTLDEIV-DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp CCHHHHT-TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred cCHHHHH-hcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCCc
Confidence 222 444 4799999994 36778777777776 358888888776
No 60
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.53 E-value=0.0051 Score=63.70 Aligned_cols=104 Identities=16% Similarity=0.180 Sum_probs=73.1
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++.|+||.|.|+|++|+.+|+.|...|++|++ ||+.. .+.+.. . +.+..+. +++
T Consensus 170 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~dr~~--~~~~~~-----~--------g~~~~~~l~ell- 225 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGRAIATRARGFGLAIHY--------HNRTR--LSHALE-----E--------GAIYHDTLDSLL- 225 (345)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHTTTCEEEE--------ECSSC--CCHHHH-----T--------TCEECSSHHHHH-
T ss_pred ccCCCEEEEEEeChhHHHHHHHHHHCCCEEEE--------ECCCC--cchhhh-----c--------CCeEeCCHHHHH-
Confidence 58899999999999999999999999999987 56655 443211 1 2233333 444
Q ss_pred ccceEEeecccc-----cccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q psy1913 355 DKVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI~ 404 (535)
..|||++-|..- +.|+.+....++ -.+++..|-+++ .. ...+.|.+..|.
T Consensus 226 ~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 283 (345)
T 4g2n_A 226 GASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLF 283 (345)
T ss_dssp HTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCce
Confidence 479999988763 456666556664 478999999994 33 334567776664
No 61
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.51 E-value=0.0033 Score=64.48 Aligned_cols=104 Identities=13% Similarity=0.218 Sum_probs=69.3
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc-CC-CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA-PT-DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i-~~-ell~ 354 (535)
++.|+||.|.|+|++|+.+|+.|...|++|++. |+.. -..+ .+...... +. +++
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~--------dr~~--~~~~-------------~~~~~~~~~~l~ell- 189 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGMHVIGV--------NTTG--HPAD-------------HFHETVAFTATADAL- 189 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE--------ESSC--CCCT-------------TCSEEEEGGGCHHHH-
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCCEEEEE--------CCCc--chhH-------------hHhhccccCCHHHHH-
Confidence 588999999999999999999999999999883 3332 0000 00000011 12 333
Q ss_pred ccceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q psy1913 355 DKVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI~ 404 (535)
..|||++-|.. .+.|+.+....++ -.+++.-+-+++ .. ...+.|.+..|.
T Consensus 190 ~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 247 (324)
T 3evt_A 190 ATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLS 247 (324)
T ss_dssp HHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCS
T ss_pred hhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCce
Confidence 47999998865 4556666666665 368999999984 43 344678777664
No 62
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=96.49 E-value=0.031 Score=54.47 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=68.3
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccceE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVDI 359 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~DI 359 (535)
++|.|.|+|++|..+|+.|.+ |.+|+. .|.+.+.+.+..+..-.. .+. +.+ .+||+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~-------------~~~~~~~~~~~~~~g~~~--------~~~~~~~-~~~D~ 58 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLV-------------WNRTFEKALRHQEEFGSE--------AVPLERV-AEARV 58 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEE-------------ECSSTHHHHHHHHHHCCE--------ECCGGGG-GGCSE
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEE-------------EeCCHHHHHHHHHCCCcc--------cCHHHHH-hCCCE
Confidence 379999999999999999999 998765 224445555544431111 112 433 38999
Q ss_pred Eeeccccccccccc----ccccc-ceEEEecCCCC-C-CHHHHHHHHhCCceeeccccccccCc
Q psy1913 360 LVPAAIEKVIRKSN----ADKVQ-AKIIVEAANGP-L-TPAAHAMLLKKNVLIIPDIFANAGGV 416 (535)
Q Consensus 360 LiPaA~~~~It~~n----a~~i~-AkiIvEgAN~p-~-T~eA~~iL~~rGI~viPD~laNaGGV 416 (535)
++-|.....-..+- .+.++ -++|+.-.|.. . +.+..+.+.++|+.+++- -+.||.
T Consensus 59 vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~--p~~~~~ 120 (289)
T 2cvz_A 59 IFTCLPTTREVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA--PVSGGT 120 (289)
T ss_dssp EEECCSSHHHHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC--CEESHH
T ss_pred EEEeCCChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe--cCCCCh
Confidence 99998755422221 22333 36777777764 2 234556777889877643 344544
No 63
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.49 E-value=0.0037 Score=57.33 Aligned_cols=111 Identities=15% Similarity=0.133 Sum_probs=65.6
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CC-
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DI- 352 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--el- 352 (535)
++.+.+|+|.|+|.+|..+|+.|.+. |..|++ .|.|.+.+..+.+..-.+. +......+. ++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~v-------------id~~~~~~~~~~~~g~~~~-~gd~~~~~~l~~~~ 101 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLG-------------IEIREEAAQQHRSEGRNVI-SGDATDPDFWERIL 101 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEE-------------EESCHHHHHHHHHTTCCEE-ECCTTCHHHHHTBC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEE-------------EECCHHHHHHHHHCCCCEE-EcCCCCHHHHHhcc
Confidence 46688999999999999999999999 999998 3466777666553211111 000000000 11
Q ss_pred ccccceEEeecccccccccc---ccccc--cceEEEecCCCCCCHHHHHHHHhCCcee
Q psy1913 353 MFDKVDILVPAAIEKVIRKS---NADKV--QAKIIVEAANGPLTPAAHAMLLKKNVLI 405 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~~---na~~i--~AkiIvEgAN~p~T~eA~~iL~~rGI~v 405 (535)
--.++|++|-|......+.. .+..+ ..++|+-. | +++..+.|.+.|+.+
T Consensus 102 ~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~---~~~~~~~l~~~G~~~ 155 (183)
T 3c85_A 102 DTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIA-E---YPDQLEGLLESGVDA 155 (183)
T ss_dssp SCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEE-S---SHHHHHHHHHHTCSE
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEE-C---CHHHHHHHHHcCCCE
Confidence 12378999988764332222 22222 23666643 3 355556778888743
No 64
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.47 E-value=0.0045 Score=54.75 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=67.4
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCc----cc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIM----FD 355 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell----~~ 355 (535)
.+|+|.|+|.+|+.+|+.|.+.|..|++ -|.|.+.+.++.+. |.-.-+..+ +. +.| -.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~v-------------id~~~~~~~~~~~~-g~~~i~gd~---~~~~~l~~a~i~ 70 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVV-------------IETSRTRVDELRER-GVRAVLGNA---ANEEIMQLAHLE 70 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEE-------------EESCHHHHHHHHHT-TCEEEESCT---TSHHHHHHTTGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEE-------------EECCHHHHHHHHHc-CCCEEECCC---CCHHHHHhcCcc
Confidence 4899999999999999999999999998 44777777666542 210000011 11 233 24
Q ss_pred cceEEeeccccccccc---cccccc--cceEEEecCCCCCCHHHHHHHHhCCce
Q psy1913 356 KVDILVPAAIEKVIRK---SNADKV--QAKIIVEAANGPLTPAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~~~~It~---~na~~i--~AkiIvEgAN~p~T~eA~~iL~~rGI~ 404 (535)
++|++|-|......+. ..+.++ ..++|+-.. +++..+.|++-|+-
T Consensus 71 ~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~----~~~~~~~l~~~G~d 120 (140)
T 3fwz_A 71 CAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAH----YDDEVAYITERGAN 120 (140)
T ss_dssp GCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEES----SHHHHHHHHHTTCS
T ss_pred cCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEEC----CHHHHHHHHHCCCC
Confidence 7899998877554333 233333 357777553 35666788999874
No 65
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.45 E-value=0.0077 Score=61.41 Aligned_cols=96 Identities=18% Similarity=0.221 Sum_probs=67.5
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCC
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEIN 325 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLD 325 (535)
-.+.|.+|+...++ +.+. ++.|++|+|.|.|+ ||..+|++|...|+.|.. ++++ + -|
T Consensus 144 ~~PcTp~gi~~ll~----------~~~i--~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv-~hs~--------t-~~ 201 (301)
T 1a4i_A 144 FIPCTPKGCLELIK----------ETGV--PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTT-CHSK--------T-AH 201 (301)
T ss_dssp CCCHHHHHHHHHHH----------TTTC--CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEE-ECTT--------C-SS
T ss_pred ccCchHHHHHHHHH----------HcCC--CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEE-EECC--------c-cc
Confidence 35789999766655 3454 58999999999996 899999999999999664 4322 0 11
Q ss_pred HHHHHHHHHHcCCcccCCCCcccCCCCccccceEEeeccc-cccccccccccccceEEEecCCCCC
Q psy1913 326 YKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAI-EKVIRKSNADKVQAKIIVEAANGPL 390 (535)
Q Consensus 326 i~~L~~~~~~~g~v~~~~~a~~i~~ell~~~~DILiPaA~-~~~It~~na~~i~AkiIvEgAN~p~ 390 (535)
+. + ....+||+|-|.. .+.|+.+-+. .--+|+.-+-+++
T Consensus 202 L~---~---------------------~~~~ADIVI~Avg~p~~I~~~~vk--~GavVIDVgi~~~ 241 (301)
T 1a4i_A 202 LD---E---------------------EVNKGDILVVATGQPEMVKGEWIK--PGAIVIDCGINYV 241 (301)
T ss_dssp HH---H---------------------HHTTCSEEEECCCCTTCBCGGGSC--TTCEEEECCCBC-
T ss_pred HH---H---------------------HhccCCEEEECCCCcccCCHHHcC--CCcEEEEccCCCc
Confidence 11 1 1247899999988 5678776653 2357777776664
No 66
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.43 E-value=0.046 Score=55.23 Aligned_cols=188 Identities=10% Similarity=0.088 Sum_probs=102.9
Q ss_pred cEEEEEccccHHHHHHHHHHHCC-CeEEEEecCCceEeCCCCCCCC-HHHHHHHHHHcCCcccCCCCccc-CC-CCcccc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGR-AKCLAIVEHDTAIVPDKGTEIN-YKDLHTYKITKGTIKGYPGTKSA-PT-DIMFDK 356 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~G-akVVaVsD~~G~iynp~G~dLD-i~~L~~~~~~~g~v~~~~~a~~i-~~-ell~~~ 356 (535)
++|+|.|+|++|..+|+.|.+.| .+|++ .|.+ ++- .+ .+++.+...+.| . .- +. +++ .+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~-~dr~-----~~~--~~~~~~~~~~~~~~g-------~-~~~s~~e~~-~~ 87 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAA-YDLR-----FND--PAASGALRARAAELG-------V-EPLDDVAGI-AC 87 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEE-ECGG-----GGC--TTTHHHHHHHHHHTT-------C-EEESSGGGG-GG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEE-EeCC-----Ccc--ccchHHHHHHHHHCC-------C-CCCCHHHHH-hc
Confidence 68999999999999999999999 88876 2221 000 00 113333333333 1 12 23 433 47
Q ss_pred ceEEeecccccccccc---cccccc-ceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccCcchhhHhhhhccccc
Q psy1913 357 VDILVPAAIEKVIRKS---NADKVQ-AKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGGVTVSYFEWLKNISHS 430 (535)
Q Consensus 357 ~DILiPaA~~~~It~~---na~~i~-AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGGVivSy~Ew~qn~~~~ 430 (535)
|||+|-|......... -.+.++ -++|+...+.+ ++.+..+.|.++|+.++...+ +|+.-. + ...+. +
T Consensus 88 aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv--~g~~~a---~-~g~l~-i 160 (317)
T 4ezb_A 88 ADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAV--MARVPP---Y-AEKVP-I 160 (317)
T ss_dssp CSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEE--CSCSTT---T-GGGSE-E
T ss_pred CCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccC--CCCchh---h-cCCEE-E
Confidence 9999999876544321 122232 35777766654 345566788999998874333 233211 1 01111 1
Q ss_pred cccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcch-hhHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q psy1913 431 SLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKS-AMYEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNK 509 (535)
Q Consensus 431 ~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~ 509 (535)
|...-+++..+.+++.+ |..+....+ ......++ +++.-+...+...+.+...++++.+
T Consensus 161 ----~vgg~~~~~~~~ll~~~--------g~~v~~~g~~~g~a~~~K------l~~N~~~~~~~~~~~E~~~la~~~G-- 220 (317)
T 4ezb_A 161 ----LVAGRRAVEVAERLNAL--------GMNLEAVGETPGQASSLK------MIRSVMIKGVEALLIEALSSAERAG-- 220 (317)
T ss_dssp ----EEESTTHHHHHHHHHTT--------TCEEEEEESSTTHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred ----EEeCChHHHHHHHHHHh--------CCCeEEeCCCcCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 01111112223333222 222111121 23333333 7788888889999999999999986
Q ss_pred CCH
Q psy1913 510 LDL 512 (535)
Q Consensus 510 ~~l 512 (535)
+|.
T Consensus 221 id~ 223 (317)
T 4ezb_A 221 VTE 223 (317)
T ss_dssp CHH
T ss_pred CCH
Confidence 565
No 67
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.42 E-value=0.0038 Score=63.13 Aligned_cols=101 Identities=15% Similarity=0.230 Sum_probs=69.9
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
.+.|+||.|.|+|++|+.+|+.|...|++|++ ||+.....+ ..+..+. +++
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~--------~dr~~~~~~------------------~~~~~~~l~ell- 171 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVIA--------YTRSSVDQN------------------VDVISESPADLF- 171 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCEEEE--------ECSSCCCTT------------------CSEECSSHHHHH-
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcEEEE--------Eeccccccc------------------cccccCChHHHh-
Confidence 47899999999999999999999999999998 344330010 0112222 333
Q ss_pred ccceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 355 DKVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
..|||++-|.. .+.|+.+....++ -.+|+.-+-+++ . .+..+.|.+.+|.
T Consensus 172 ~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 172 RQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp HHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred hccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccce
Confidence 47999998876 3455566666665 368889998883 3 4445678887764
No 68
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.41 E-value=0.011 Score=62.19 Aligned_cols=159 Identities=17% Similarity=0.226 Sum_probs=94.3
Q ss_pred HHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc
Q psy1913 269 MCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA 348 (535)
Q Consensus 269 ~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i 348 (535)
.+..|. ++.|+||.|.|+|++|+.+|+.|...|++|++ .|... ...+ .+....
T Consensus 110 ~r~~g~--~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~---------------~d~~~-----~~~~-----~~~~~~ 162 (381)
T 3oet_A 110 AERDGF--SLRDRTIGIVGVGNVGSRLQTRLEALGIRTLL---------------CDPPR-----AARG-----DEGDFR 162 (381)
T ss_dssp HHHTTC--CGGGCEEEEECCSHHHHHHHHHHHHTTCEEEE---------------ECHHH-----HHTT-----CCSCBC
T ss_pred HHhcCC--ccCCCEEEEEeECHHHHHHHHHHHHCCCEEEE---------------ECCCh-----HHhc-----cCcccC
Confidence 445664 58999999999999999999999999999998 33321 1111 011111
Q ss_pred CC-CCccccceEEeeccc---------ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce-eecccccccc
Q psy1913 349 PT-DIMFDKVDILVPAAI---------EKVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNVL-IIPDIFANAG 414 (535)
Q Consensus 349 ~~-ell~~~~DILiPaA~---------~~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI~-viPD~laNaG 414 (535)
+. +++ ..|||++-|.. .+.|+.+....++ -.+++..+-|++ .. ...+.|++.+|. ..=|++.+=-
T Consensus 163 sl~ell-~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP 241 (381)
T 3oet_A 163 TLDELV-QEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEP 241 (381)
T ss_dssp CHHHHH-HHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTT
T ss_pred CHHHHH-hhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCC
Confidence 21 343 47999988874 3456555555564 478999999984 33 344678887765 3445544332
Q ss_pred CcchhhHhhh-hccccccccccccccchhhHHHHHHhhhhhhhhhhhh
Q psy1913 415 GVTVSYFEWL-KNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNK 461 (535)
Q Consensus 415 GVivSy~Ew~-qn~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~ 461 (535)
-.-.+-++.. ---.|+.| ++.+........+.+.+.+.++.
T Consensus 242 ~~~~~L~~~~~i~TPHiag------~t~e~~~~~~~~~~~~l~~~l~~ 283 (381)
T 3oet_A 242 DLNVALLEAVDIGTSHIAG------YTLEGKARGTTQVFEAYSAFIGR 283 (381)
T ss_dssp SCCHHHHHHSSEECSSCTT------CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcchhhhCCEEECCccCc------CcHHHHHHHHHHHHHHHHHHHcC
Confidence 2211211110 00235544 45665555555555555555543
No 69
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.39 E-value=0.0016 Score=66.51 Aligned_cols=106 Identities=13% Similarity=0.175 Sum_probs=68.1
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|++|.|+|+|++|+.+|+.|...|.+|++ ||++. -..+.+ .+. +....+. +++ .
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~--------~d~~~--~~~~~~----~~~-------g~~~~~l~e~l-~ 209 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQRFL--------YTGRQ--PRPEEA----AEF-------QAEFVSTPELA-A 209 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCCEEE--------EESSS--CCHHHH----HTT-------TCEECCHHHHH-H
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE--------ECCCC--cchhHH----Hhc-------CceeCCHHHHH-h
Confidence 58899999999999999999999999999887 33322 122221 111 1222222 333 4
Q ss_pred cceEEeeccccc-----ccccccccccc-ceEEEecCCCC-CC-HHHHHHHHhCCce
Q psy1913 356 KVDILVPAAIEK-----VIRKSNADKVQ-AKIIVEAANGP-LT-PAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~~~-----~It~~na~~i~-AkiIvEgAN~p-~T-~eA~~iL~~rGI~ 404 (535)
+||+++.|.... .|+.+....++ -.+|+..+.++ ++ .+..+.|.+.+|.
T Consensus 210 ~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 210 QSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCcc
Confidence 899999998654 34333344454 35778888887 34 4455677776653
No 70
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.31 E-value=0.0051 Score=66.89 Aligned_cols=105 Identities=23% Similarity=0.190 Sum_probs=69.8
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
.+.|++|.|+|+|++|+.+|+.|...|++|++ ||+.- +.+. ..+.| ....+. +++ .
T Consensus 139 ~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~--------~d~~~---~~~~----a~~~g-------~~~~~l~e~~-~ 195 (529)
T 1ygy_A 139 EIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVA--------YDPYV---SPAR----AAQLG-------IELLSLDDLL-A 195 (529)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE--------ECTTS---CHHH----HHHHT-------CEECCHHHHH-H
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEE--------ECCCC---ChhH----HHhcC-------cEEcCHHHHH-h
Confidence 58999999999999999999999999999987 44432 2222 12222 222222 333 3
Q ss_pred cceEEeeccc-----ccccccccccccc-ceEEEecCCCCCCHHH--HHHHHhCCce
Q psy1913 356 KVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPLTPAA--HAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~T~eA--~~iL~~rGI~ 404 (535)
+||+++.|.. .+.|+.+....++ -.+|+.-+-+++-.+. .+.|.+..|.
T Consensus 196 ~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ 252 (529)
T 1ygy_A 196 RADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVR 252 (529)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEE
T ss_pred cCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCcc
Confidence 8999999965 3455554555564 4688888888754332 3667776553
No 71
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.26 E-value=0.026 Score=56.74 Aligned_cols=127 Identities=12% Similarity=0.070 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHhcHHHHHHhC-CCCCCCCcEEEEEccccHHHHHHHHHHHCCC-eEEEEecCCceEeCCCCCCCCHHH
Q psy1913 251 TGRGVFTAAEILVNNEEYMCEIG-LEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKD 328 (535)
Q Consensus 251 Tg~GV~~~i~~~l~~~~~~~~~g-~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaVsD~~G~iynp~G~dLDi~~ 328 (535)
.+.|+..+++ ..+ . ++++++|.|.|.|.+|+.++..|.+.|+ +|+. . +-+.+.
T Consensus 123 d~~G~~~~l~----------~~~~~--~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v-~------------nR~~~k 177 (297)
T 2egg_A 123 DGLGYVQALE----------EEMNI--TLDGKRILVIGAGGGARGIYFSLLSTAAERIDM-A------------NRTVEK 177 (297)
T ss_dssp HHHHHHHHHH----------HHTTC--CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEE-E------------CSSHHH
T ss_pred CHHHHHHHHH----------HhCCC--CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEE-E------------eCCHHH
Confidence 4567666665 233 3 4689999999999999999999999998 6654 3 255666
Q ss_pred HHHHHHHcCCcccCCCCcccC--C--CCccccceEEeecccccccccc-----cccccc-ceEEEecCCCC-CCHHHHHH
Q psy1913 329 LHTYKITKGTIKGYPGTKSAP--T--DIMFDKVDILVPAAIEKVIRKS-----NADKVQ-AKIIVEAANGP-LTPAAHAM 397 (535)
Q Consensus 329 L~~~~~~~g~v~~~~~a~~i~--~--ell~~~~DILiPaA~~~~It~~-----na~~i~-AkiIvEgAN~p-~T~eA~~i 397 (535)
+.+..++.+.. + + ..++ . +.+ .++||+|-|+.-...... ....++ -.+|++-.-+| .|+ -.+.
T Consensus 178 a~~la~~~~~~--~-~-~~~~~~~~~~~~-~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T~-ll~~ 251 (297)
T 2egg_A 178 AERLVREGDER--R-S-AYFSLAEAETRL-AEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETK-WLKE 251 (297)
T ss_dssp HHHHHHHSCSS--S-C-CEECHHHHHHTG-GGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSCH-HHHH
T ss_pred HHHHHHHhhhc--c-C-ceeeHHHHHhhh-ccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCCH-HHHH
Confidence 66666654321 0 0 1111 1 222 479999999875442110 112232 46888988888 565 4455
Q ss_pred HHhCCceeecc
Q psy1913 398 LLKKNVLIIPD 408 (535)
Q Consensus 398 L~~rGI~viPD 408 (535)
.+++|+.+++.
T Consensus 252 A~~~G~~~v~G 262 (297)
T 2egg_A 252 AKARGARVQNG 262 (297)
T ss_dssp HHHTTCEEECS
T ss_pred HHHCcCEEECC
Confidence 78899988765
No 72
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.25 E-value=0.0074 Score=60.96 Aligned_cols=95 Identities=17% Similarity=0.224 Sum_probs=63.5
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHC--CCeEEEEecCCceEeCCCCCC
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRG--RAKCLAIVEHDTAIVPDKGTE 323 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~--GakVVaVsD~~G~iynp~G~d 323 (535)
-.+.|.+|+...++ +.+. +++|++++|.|.|+ ||..+|++|... |+.|.. ++++ +
T Consensus 137 ~~PcTp~gi~~ll~----------~~~i--~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv-~h~~--------t- 194 (281)
T 2c2x_A 137 PLPCTPRGIVHLLR----------RYDI--SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTL-CHTG--------T- 194 (281)
T ss_dssp CCCHHHHHHHHHHH----------HTTC--CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEE-ECTT--------C-
T ss_pred CCCChHHHHHHHHH----------HcCC--CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEE-EECc--------h-
Confidence 36889999776665 3454 58999999999997 699999999999 888765 3321 1
Q ss_pred CCHHHHHHHHHHcCCcccCCCCcccCCCCccccceEEeeccc-cccccccccccccceEEEecCCCC
Q psy1913 324 INYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAI-EKVIRKSNADKVQAKIIVEAANGP 389 (535)
Q Consensus 324 LDi~~L~~~~~~~g~v~~~~~a~~i~~ell~~~~DILiPaA~-~~~It~~na~~i~AkiIvEgAN~p 389 (535)
-| |.+ ....+||+|-|+. .+.|+.+-+.. --+|+.-+-++
T Consensus 195 ~~---L~~---------------------~~~~ADIVI~Avg~p~~I~~~~vk~--GavVIDVgi~r 235 (281)
T 2c2x_A 195 RD---LPA---------------------LTRQADIVVAAVGVAHLLTADMVRP--GAAVIDVGVSR 235 (281)
T ss_dssp SC---HHH---------------------HHTTCSEEEECSCCTTCBCGGGSCT--TCEEEECCEEE
T ss_pred hH---HHH---------------------HHhhCCEEEECCCCCcccCHHHcCC--CcEEEEccCCC
Confidence 11 111 1247899998887 55677665432 23455544433
No 73
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.25 E-value=0.0026 Score=61.79 Aligned_cols=92 Identities=18% Similarity=0.171 Sum_probs=57.7
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHH--------------HHHHHHHcCCcccC
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKD--------------LHTYKITKGTIKGY 342 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~--------------L~~~~~~~g~v~~~ 342 (535)
++.+++|.|.|+|++|..+|+.|.+.|..|+. .|.+.+. +.++..+.+
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~-------------~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 77 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTI-------------GTRDPKATLARAEPDAMGAPPFSQWLPEHP----- 77 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------EESCHHHHHTCC-------CCHHHHGGGST-----
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEE-------------EeCChhhhhhhhhhhhhcchhhhHHHhhcC-----
Confidence 57889999999999999999999999999876 2244443 222222211
Q ss_pred CCCcccCC-CCccccceEEeecccccccccc---c-cccccceEEEecCCC
Q psy1913 343 PGTKSAPT-DIMFDKVDILVPAAIEKVIRKS---N-ADKVQAKIIVEAANG 388 (535)
Q Consensus 343 ~~a~~i~~-ell~~~~DILiPaA~~~~It~~---n-a~~i~AkiIvEgAN~ 388 (535)
.....+. +.+ .+||++|-|.....+... . .+.+.-++|+..+|+
T Consensus 78 -~~~~~~~~e~~-~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~ 126 (245)
T 3dtt_A 78 -HVHLAAFADVA-AGAELVVNATEGASSIAALTAAGAENLAGKILVDIANP 126 (245)
T ss_dssp -TCEEEEHHHHH-HHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCC
T ss_pred -ceeccCHHHHH-hcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCC
Confidence 1111112 332 479999999876654321 1 223355799999985
No 74
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.22 E-value=0.0053 Score=65.72 Aligned_cols=117 Identities=12% Similarity=0.061 Sum_probs=75.7
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc--
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD-- 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~-- 355 (535)
.++|.|.|+|++|..+|+.|.+.|..|+. .|.+.+.+.+..++.+. .+....+. ++...
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v-------------~dr~~~~~~~l~~~~~~----~gi~~~~s~~e~v~~l~ 67 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAI-------------YNRTTSKTEEVFKEHQD----KNLVFTKTLEEFVGSLE 67 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSSHHHHHHHHHHTTT----SCEEECSSHHHHHHTBC
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEE-------------EcCCHHHHHHHHHhCcC----CCeEEeCCHHHHHhhcc
Confidence 36899999999999999999999998766 33556666666654320 11222222 34332
Q ss_pred cceEEeecccccccccccc----cccc-ceEEEecCCCC--CCHHHHHHHHhCCceeeccccccccC
Q psy1913 356 KVDILVPAAIEKVIRKSNA----DKVQ-AKIIVEAANGP--LTPAAHAMLLKKNVLIIPDIFANAGG 415 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na----~~i~-AkiIvEgAN~p--~T~eA~~iL~~rGI~viPD~laNaGG 415 (535)
+||+++-|........+-+ +.++ -++|+..+|+. .+.+..+.|.++|+.++. ..++||
T Consensus 68 ~aDvVilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~--~pv~gg 132 (474)
T 2iz1_A 68 KPRRIMLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIG--TGVSGG 132 (474)
T ss_dssp SSCEEEECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEE--EEECSH
T ss_pred CCCEEEEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEEC--CCCCCC
Confidence 5999999987653222222 3333 36899999986 244555667778988873 244554
No 75
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.22 E-value=0.0061 Score=62.16 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=69.7
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCC-CCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPD-KGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM 353 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp-~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell 353 (535)
.+.|++|.|.|+|++|+.+|+.|...|++|++ ||+ .. +.. . ..+.| ....+. +++
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~--------~d~~~~---~~~---~-~~~~g-------~~~~~~l~ell 200 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDMDIDY--------FDTHRA---SSS---D-EASYQ-------ATFHDSLDSLL 200 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE--------ECSSCC---CHH---H-HHHHT-------CEECSSHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE--------ECCCCc---Chh---h-hhhcC-------cEEcCCHHHHH
Confidence 58999999999999999999999999999987 444 33 221 1 11222 222322 444
Q ss_pred cccceEEeecccc-----cccccccccccc-ceEEEecCCCC-CCH-HHHHHHHhCCce
Q psy1913 354 FDKVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGP-LTP-AAHAMLLKKNVL 404 (535)
Q Consensus 354 ~~~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p-~T~-eA~~iL~~rGI~ 404 (535)
..|||++-|... +.|+.+....++ -.+|+.-+-++ ++. +..+.|.+..|.
T Consensus 201 -~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 201 -SVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp -HHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred -hhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 489999998763 345554555564 36788888887 443 345678777654
No 76
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.15 E-value=0.0049 Score=63.10 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=66.2
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|++|.|.|+|++|+.+|+.|...|.+|++ ||++. +.+. ..+.| ....+. +++ .
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~--------~d~~~---~~~~----~~~~g-------~~~~~l~~~l-~ 203 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNMRILY--------YSRTR---KEEV----ERELN-------AEFKPLEDLL-R 203 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC---CHHH----HHHHC-------CEECCHHHHH-H
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCEEEE--------ECCCc---chhh----HhhcC-------cccCCHHHHH-h
Confidence 58999999999999999999999999999887 34332 2211 11222 121111 333 4
Q ss_pred cceEEeecccccc-----cccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCc
Q psy1913 356 KVDILVPAAIEKV-----IRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNV 403 (535)
Q Consensus 356 ~~DILiPaA~~~~-----It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI 403 (535)
+||+++-|..... ++.+-...++ -.+|+.-+.+++ +. ...+.|.+..|
T Consensus 204 ~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i 259 (334)
T 2dbq_A 204 ESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWI 259 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSS
T ss_pred hCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCe
Confidence 8999999987544 3333333443 357778888874 33 33456776554
No 77
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.14 E-value=0.0075 Score=61.76 Aligned_cols=103 Identities=23% Similarity=0.263 Sum_probs=68.1
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|++|.|+|+|++|+.+|+.|...|++|++ ||+.. -.. + ++ + ....+. +++ .
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~--------~d~~~--~~~--~----~~------~--~~~~~l~ell-~ 197 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGATVIG--------EDVFE--IKG--I----ED------Y--CTQVSLDEVL-E 197 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC--CCS--C----TT------T--CEECCHHHHH-H
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE--------ECCCc--cHH--H----Hh------c--cccCCHHHHH-h
Confidence 57899999999999999999999999999887 33332 100 0 00 0 111121 344 3
Q ss_pred cceEEeecccc-----cccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 356 KVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
.|||++.|..- +.|+.+....++ -.+++.-+-+++ . ....+.|.+.+|.
T Consensus 198 ~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~ 254 (331)
T 1xdw_A 198 KSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLG 254 (331)
T ss_dssp HCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCce
Confidence 79999998653 455555556665 367888888873 4 3445678887765
No 78
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.07 E-value=0.013 Score=61.89 Aligned_cols=111 Identities=17% Similarity=0.255 Sum_probs=76.8
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCcccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDK 356 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell~~~ 356 (535)
+++..+|+|.|.|.+|.++|++|...|++=|-+.|++|.|+...+.+|+..+. .+...+.. +.....+. +.+ ..
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~-~fa~~~~~---~~~~~~L~-eav-~~ 258 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHL-DIAKVTNR---EFKSGTLE-DAL-EG 258 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC----CHHHHHSC---TTCCCSCS-HHH-HT
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHH-HHhhccCc---ccchhhHH-HHh-cc
Confidence 58999999999999999999999999997778899999998765322543221 11111110 00000000 222 25
Q ss_pred ceEEeeccccccccccccccccc-eEEEecCCCC--CCHH
Q psy1913 357 VDILVPAAIEKVIRKSNADKVQA-KIIVEAANGP--LTPA 393 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~i~A-kiIvEgAN~p--~T~e 393 (535)
+||||=++.++.+|++-+.++.- .||.--||-- +|||
T Consensus 259 ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe 298 (398)
T 2a9f_A 259 ADIFIGVSAPGVLKAEWISKMAARPVIFAMANPIPEIYPD 298 (398)
T ss_dssp TCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSSCSSCHH
T ss_pred CCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCCccCCHH
Confidence 79999999999999999998854 7888888842 4554
No 79
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.07 E-value=0.012 Score=59.48 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=43.0
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHCCCeEEEEecC
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~GakVVaVsD~ 312 (535)
-.+.|.+|+...++ +.+. +++|++++|.|.|+ ||+.+|.+|+..|+.|. |+++
T Consensus 139 ~~PcTp~gv~~lL~----------~~~i--~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVt-v~h~ 192 (285)
T 3p2o_A 139 FLPCTPLGVMKLLK----------AYEI--DLEGKDAVIIGASNIVGRPMATMLLNAGATVS-VCHI 192 (285)
T ss_dssp CCCHHHHHHHHHHH----------HTTC--CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECT
T ss_pred CCCCCHHHHHHHHH----------HhCC--CCCCCEEEEECCCchHHHHHHHHHHHCCCeEE-EEeC
Confidence 46889999876655 4554 58999999999988 89999999999999865 4443
No 80
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.06 E-value=0.0065 Score=65.84 Aligned_cols=91 Identities=19% Similarity=0.263 Sum_probs=62.2
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
.+.|++|.|.|+|.||..+|+.+...|++|++ .|.+...+...++. | ++.++. +++ .
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv-------------~d~~~~~~~~A~~~-G-------a~~~~l~e~l-~ 328 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSV-------------TEIDPINALQAMME-G-------FDVVTVEEAI-G 328 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHT-T-------CEECCHHHHG-G
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHHc-C-------CEEecHHHHH-h
Confidence 36899999999999999999999999999998 55777776554432 2 222222 443 4
Q ss_pred cceEEeeccc-ccccccccccccc-ceEEEecCCCC
Q psy1913 356 KVDILVPAAI-EKVIRKSNADKVQ-AKIIVEAANGP 389 (535)
Q Consensus 356 ~~DILiPaA~-~~~It~~na~~i~-AkiIvEgAN~p 389 (535)
.+||+|-|+. .+.|+.+....++ --+|+.-+.++
T Consensus 329 ~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 329 DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 7999999975 3445545555554 23445445444
No 81
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.04 E-value=0.0082 Score=60.78 Aligned_cols=50 Identities=22% Similarity=0.211 Sum_probs=42.0
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHCCCeEEE
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~GakVVa 308 (535)
-.+.|.+|+...++ +.+. +++|++++|.|.|+ ||+.+|.+|+..|+.|..
T Consensus 140 ~~PcTp~gv~~lL~----------~~~i--~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv 190 (286)
T 4a5o_A 140 LRPCTPKGIMTLLA----------STGA--DLYGMDAVVVGASNIVGRPMALELLLGGCTVTV 190 (286)
T ss_dssp SCCHHHHHHHHHHH----------HTTC--CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHH----------HhCC--CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEE
Confidence 36889999876655 4554 58999999999987 999999999999998765
No 82
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.00 E-value=0.011 Score=57.20 Aligned_cols=102 Identities=9% Similarity=0.106 Sum_probs=65.8
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|+|.|+|++|..+++.|.+.|..|+. .|.+.+.+.+..++.| ....+. +++. +||
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~-------------~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~-~~D 62 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELII-------------SGSSLERSKEIAEQLA-------LPYAMSHQDLID-QVD 62 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEE-------------ECSSHHHHHHHHHHHT-------CCBCSSHHHHHH-TCS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEE-------------ECCCHHHHHHHHHHcC-------CEeeCCHHHHHh-cCC
Confidence 5899999999999999999999976654 3355666666655433 111222 3443 899
Q ss_pred EEeeccccccccccccccc-cceEEEecCCCCCCHHHHHHHHhCCcee
Q psy1913 359 ILVPAAIEKVIRKSNADKV-QAKIIVEAANGPLTPAAHAMLLKKNVLI 405 (535)
Q Consensus 359 ILiPaA~~~~It~~na~~i-~AkiIvEgAN~p~T~eA~~iL~~rGI~v 405 (535)
+++-|.... ...+-+..+ .-++|++-.++-...+..+++ .++..+
T Consensus 63 ~Vi~~v~~~-~~~~v~~~l~~~~~vv~~~~~~~~~~l~~~~-~~~~~~ 108 (259)
T 2ahr_A 63 LVILGIKPQ-LFETVLKPLHFKQPIISMAAGISLQRLATFV-GQDLPL 108 (259)
T ss_dssp EEEECSCGG-GHHHHHTTSCCCSCEEECCTTCCHHHHHHHH-CTTSCE
T ss_pred EEEEEeCcH-hHHHHHHHhccCCEEEEeCCCCCHHHHHHhc-CCCCCE
Confidence 999998743 333444444 335888888765444555554 355433
No 83
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.98 E-value=0.0088 Score=58.97 Aligned_cols=104 Identities=13% Similarity=0.137 Sum_probs=68.8
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|.|.|+|++|..+++.|.+.|..|+. .|.+.+.+.+..+. | ....+. +++ .+||
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~-------------~~~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D 62 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYA-------------FDLMEANVAAVVAQ-G-------AQACENNQKVA-AASD 62 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEE-------------ECSSHHHHHHHHTT-T-------CEECSSHHHHH-HHCS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEE-------------EeCCHHHHHHHHHC-C-------CeecCCHHHHH-hCCC
Confidence 6899999999999999999999998875 33555665554432 2 222222 333 3799
Q ss_pred EEeeccccccccc-------ccccccc-ceEEEecCCCC--CCHHHHHHHHhCCceee
Q psy1913 359 ILVPAAIEKVIRK-------SNADKVQ-AKIIVEAANGP--LTPAAHAMLLKKNVLII 406 (535)
Q Consensus 359 ILiPaA~~~~It~-------~na~~i~-AkiIvEgAN~p--~T~eA~~iL~~rGI~vi 406 (535)
+++-|.....-.. +-.+.++ -++|+.-+|+. .+.+..+.|.++|+.++
T Consensus 63 ~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 63 IIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp EEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 9999985332221 2122333 36888888886 33456667888898876
No 84
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.97 E-value=0.017 Score=55.82 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=61.6
Q ss_pred cEEEEEccccHHHHHHHHHHHCC-CeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccC-C-CCccccc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGR-AKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAP-T-DIMFDKV 357 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~G-akVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~-~-ell~~~~ 357 (535)
++|.|.|.|++|..+|+.|.+.| ..|+. .|.+.+.+.+..+..| ....+ . +.+ +|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~-------------~~r~~~~~~~~~~~~g-------~~~~~~~~~~~--~~ 58 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYI-------------ANRGAEKRERLEKELG-------VETSATLPELH--SD 58 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEE-------------ECSSHHHHHHHHHHTC-------CEEESSCCCCC--TT
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEE-------------ECCCHHHHHHHHHhcC-------CEEeCCHHHHh--cC
Confidence 47999999999999999999999 88766 3355666666655433 22222 2 455 89
Q ss_pred eEEeecccccccccccccccc--ceEEEecCCCCCCHHHHHHHH
Q psy1913 358 DILVPAAIEKVIRKSNADKVQ--AKIIVEAANGPLTPAAHAMLL 399 (535)
Q Consensus 358 DILiPaA~~~~It~~na~~i~--AkiIvEgAN~p~T~eA~~iL~ 399 (535)
|+++-|.....+ .+-+..+. -++|+.-+|+-......+.|.
T Consensus 59 D~vi~~v~~~~~-~~v~~~l~~~~~ivv~~~~g~~~~~l~~~~~ 101 (263)
T 1yqg_A 59 DVLILAVKPQDM-EAACKNIRTNGALVLSVAAGLSVGTLSRYLG 101 (263)
T ss_dssp SEEEECSCHHHH-HHHHTTCCCTTCEEEECCTTCCHHHHHHHTT
T ss_pred CEEEEEeCchhH-HHHHHHhccCCCEEEEecCCCCHHHHHHHcC
Confidence 999999873322 22222332 468888777654333444443
No 85
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=95.93 E-value=0.016 Score=61.60 Aligned_cols=102 Identities=16% Similarity=0.247 Sum_probs=70.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++.|+||.|.|+|++|+.+|+.|...|++|++ ||+.. ... . .++..... +++
T Consensus 153 el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------yd~~~-~~~----------~------~~~~~~~sl~ell- 206 (416)
T 3k5p_A 153 EVRGKTLGIVGYGNIGSQVGNLAESLGMTVRY--------YDTSD-KLQ----------Y------GNVKPAASLDELL- 206 (416)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECTTC-CCC----------B------TTBEECSSHHHHH-
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE--------ECCcc-hhc----------c------cCcEecCCHHHHH-
Confidence 58899999999999999999999999999987 44332 000 0 01222223 343
Q ss_pred ccceEEeecccc-----cccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 355 DKVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
..|||++-|... +.|+.+....++ -.+++..|-+++ . .+..+.|.+..|.
T Consensus 207 ~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~ 264 (416)
T 3k5p_A 207 KTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLA 264 (416)
T ss_dssp HHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred hhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCcc
Confidence 479999988764 556666556665 478999999984 3 3445667777664
No 86
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.91 E-value=0.012 Score=60.82 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=58.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++.|+||.|.|+|++|+.+|+.|...|.+|++ ||+.. -. .. +...... +++
T Consensus 168 ~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~--------~dr~~--~~---------~~-------~~~~~~sl~ell- 220 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGRALASRAEAFGMSVRY--------WNRST--LS---------GV-------DWIAHQSPVDLA- 220 (340)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE--------ECSSC--CT---------TS-------CCEECSSHHHHH-
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCEEEE--------EcCCc--cc---------cc-------CceecCCHHHHH-
Confidence 68999999999999999999999999999886 33333 10 00 1111222 333
Q ss_pred ccceEEeeccc-----ccccccccccccc-ceEEEecCCCCCC--HHHHHHHHhCCce
Q psy1913 355 DKVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPLT--PAAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~T--~eA~~iL~~rGI~ 404 (535)
..|||++-|.. .+.|+.+....++ -.+++..|.+++- .+..+.|.+..|.
T Consensus 221 ~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~ 278 (340)
T 4dgs_A 221 RDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIA 278 (340)
T ss_dssp HTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSS
T ss_pred hcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCce
Confidence 47899998876 3455555555554 3688899998853 3334567666553
No 87
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.91 E-value=0.0087 Score=62.16 Aligned_cols=45 Identities=16% Similarity=0.146 Sum_probs=38.9
Q ss_pred CcEEEEEccccHHHHHHHHHHHC----CCeEEEEecCCceEeCCC--CCCCCH
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG----RAKCLAIVEHDTAIVPDK--GTEINY 326 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~----GakVVaVsD~~G~iynp~--G~dLDi 326 (535)
-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++...++++ | ++.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~g--i~~ 54 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSP--LNV 54 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSC--CSC
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCC--CCc
Confidence 36899999999999999999886 379999999988888877 8 654
No 88
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.89 E-value=0.018 Score=58.39 Aligned_cols=96 Identities=19% Similarity=0.167 Sum_probs=65.2
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCC
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEIN 325 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLD 325 (535)
-.+.|.+|+...++ +.+. +++|++|+|.|.|+ ||..+|++|...|+.|.. ++++ + -|
T Consensus 138 ~~PcTp~gi~~ll~----------~~~i--~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv-~hs~--------t-~~ 195 (288)
T 1b0a_A 138 LRPCTPRGIVTLLE----------RYNI--DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTV-THRF--------T-KN 195 (288)
T ss_dssp SCCHHHHHHHHHHH----------HTTC--CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEE-ECSS--------C-SC
T ss_pred CCCCcHHHHHHHHH----------HcCC--CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEE-EeCC--------c-hh
Confidence 36889999776665 4554 58999999999997 799999999999999765 3321 1 11
Q ss_pred HHHHHHHHHHcCCcccCCCCcccCCCCccccceEEeeccc-cccccccccccccceEEEecCCCCC
Q psy1913 326 YKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAI-EKVIRKSNADKVQAKIIVEAANGPL 390 (535)
Q Consensus 326 i~~L~~~~~~~g~v~~~~~a~~i~~ell~~~~DILiPaA~-~~~It~~na~~i~AkiIvEgAN~p~ 390 (535)
+ .+ ....+||+|-|.. .+.|+.+-+.. --+|+.-+-+++
T Consensus 196 L---~~---------------------~~~~ADIVI~Avg~p~lI~~~~vk~--GavVIDVgi~r~ 235 (288)
T 1b0a_A 196 L---RH---------------------HVENADLLIVAVGKPGFIPGDWIKE--GAIVIDVGINRL 235 (288)
T ss_dssp H---HH---------------------HHHHCSEEEECSCCTTCBCTTTSCT--TCEEEECCCEEC
T ss_pred H---HH---------------------HhccCCEEEECCCCcCcCCHHHcCC--CcEEEEccCCcc
Confidence 1 11 1246788888887 55677665421 236666665543
No 89
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.89 E-value=0.013 Score=57.68 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=68.8
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|+|.|+|++|..+++.|.+.|.+|+. .|.+.+.+.+..+. | ....+. +++ .+||
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~-------------~~~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D 63 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVV-------------SDRNPEAIADVIAA-G-------AETASTAKAIA-EQCD 63 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHT-T-------CEECSSHHHHH-HHCS
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEE-------------EeCCHHHHHHHHHC-C-------CeecCCHHHHH-hCCC
Confidence 5899999999999999999999998866 33566666555443 2 222222 333 3799
Q ss_pred EEeeccccccccccc-------ccccc-ceEEEecCCCCC--CHHHHHHHHhCCceee
Q psy1913 359 ILVPAAIEKVIRKSN-------ADKVQ-AKIIVEAANGPL--TPAAHAMLLKKNVLII 406 (535)
Q Consensus 359 ILiPaA~~~~It~~n-------a~~i~-AkiIvEgAN~p~--T~eA~~iL~~rGI~vi 406 (535)
+++-|.....-..+- .+.++ -++|+.-+|+.. +.+..+.+.++|+.++
T Consensus 64 ~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 121 (299)
T 1vpd_A 64 VIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEML 121 (299)
T ss_dssp EEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred EEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 999998733221111 12232 368888888863 3455667888898775
No 90
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.88 E-value=0.011 Score=58.26 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=68.0
Q ss_pred CcEEEEEccccHHHHHHHHHHHC--CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG--RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~--GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~ 355 (535)
-++|+|.|+|++|..+|+.|.+. |..|++ .|.+.+.+....+ .|... ...+. +.+ .
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-------------~d~~~~~~~~~~~-~g~~~-----~~~~~~~~~~-~ 65 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVG-------------YNRSDRSRDIALE-RGIVD-----EATADFKVFA-A 65 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEE-------------ECSSHHHHHHHHH-TTSCS-----EEESCTTTTG-G
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEE-------------EcCCHHHHHHHHH-cCCcc-----cccCCHHHhh-c
Confidence 36899999999999999999987 567776 3455666655443 33210 11222 333 4
Q ss_pred cceEEeeccccccccccccc----c-cc-ceEEEecCCCCC--CHHHHHHHHhCCceeecc
Q psy1913 356 KVDILVPAAIEKVIRKSNAD----K-VQ-AKIIVEAANGPL--TPAAHAMLLKKNVLIIPD 408 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~----~-i~-AkiIvEgAN~p~--T~eA~~iL~~rGI~viPD 408 (535)
+||++|-|.....+ .+-+. . ++ -.+|+..+|.+. +....+.|.++++.++|-
T Consensus 66 ~aDvVilavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~ 125 (290)
T 3b1f_A 66 LADVIILAVPIKKT-IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGS 125 (290)
T ss_dssp GCSEEEECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEE
T ss_pred CCCEEEEcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEe
Confidence 89999999886655 32222 2 32 357887777653 233445554457878773
No 91
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.88 E-value=0.031 Score=55.22 Aligned_cols=128 Identities=9% Similarity=0.121 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHH
Q psy1913 251 TGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLH 330 (535)
Q Consensus 251 Tg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~ 330 (535)
-+.|+..+++ ..|. +++++++.|.|.|.+|+.++..|.+.|++|+. .+-+.+++.
T Consensus 102 D~~G~~~~L~----------~~~~--~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v-------------~~R~~~~a~ 156 (272)
T 1p77_A 102 DGIGLVTDLQ----------RLNW--LRPNQHVLILGAGGATKGVLLPLLQAQQNIVL-------------ANRTFSKTK 156 (272)
T ss_dssp HHHHHHHHHH----------HTTC--CCTTCEEEEECCSHHHHTTHHHHHHTTCEEEE-------------EESSHHHHH
T ss_pred CHHHHHHHHH----------HhCC--CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEE-------------EECCHHHHH
Confidence 3788777766 2454 47899999999999999999999999988776 235566666
Q ss_pred HHHHHcCCcccCCCCcccCC-CCccccceEEeeccccccccc-ccc--ccc-cceEEEecCCCC-C-CHHHHHHHHhCCc
Q psy1913 331 TYKITKGTIKGYPGTKSAPT-DIMFDKVDILVPAAIEKVIRK-SNA--DKV-QAKIIVEAANGP-L-TPAAHAMLLKKNV 403 (535)
Q Consensus 331 ~~~~~~g~v~~~~~a~~i~~-ell~~~~DILiPaA~~~~It~-~na--~~i-~AkiIvEgAN~p-~-T~eA~~iL~~rGI 403 (535)
+..++.+.. ......+. ++...++||+|-|+.-..... ... ..+ ...+|++-.-+| . |+.. +..+++|+
T Consensus 157 ~l~~~~~~~---~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~~t~ll-~~a~~~G~ 232 (272)
T 1p77_A 157 ELAERFQPY---GNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFI-ALCKSLGL 232 (272)
T ss_dssp HHHHHHGGG---SCEEEEEGGGCCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHHH-HHHHHTTC
T ss_pred HHHHHcccc---CCeEEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCcCCHHH-HHHHHcCC
Confidence 665543211 01111111 221137999999987443210 001 112 236788888777 4 6654 45678898
Q ss_pred e-eec
Q psy1913 404 L-IIP 407 (535)
Q Consensus 404 ~-viP 407 (535)
. +++
T Consensus 233 ~~~v~ 237 (272)
T 1p77_A 233 TNVSD 237 (272)
T ss_dssp CCEEC
T ss_pred CEeeC
Confidence 6 664
No 92
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=95.85 E-value=0.024 Score=57.34 Aligned_cols=100 Identities=9% Similarity=0.143 Sum_probs=67.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|++|.|.|+|++|+.+|+.|...|++|++ ||+.. -+ . + + ....+. +++ .
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~--------~dr~~--~~--~--------~----~--~~~~~l~ell-~ 173 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRG--------FSRTP--KE--G--------P----W--RFTNSLEEAL-R 173 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEE--------ECSSC--CC--S--------S----S--CCBSCSHHHH-T
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEE--------ECCCc--cc--c--------C----c--ccCCCHHHHH-h
Confidence 58999999999999999999999999999886 33333 10 0 1 0 011111 333 4
Q ss_pred cceEEeecccc-----cccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCc
Q psy1913 356 KVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNV 403 (535)
Q Consensus 356 ~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI 403 (535)
.|||++-|... +.|+.+....++ -.+++.-+.+++ .. +..+.|.+..|
T Consensus 174 ~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i 229 (303)
T 1qp8_A 174 EARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQ 229 (303)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTT
T ss_pred hCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCc
Confidence 79999988753 345555555665 468889998884 33 34566777654
No 93
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=95.85 E-value=0.014 Score=59.92 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCcc
Q psy1913 276 PCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMF 354 (535)
Q Consensus 276 ~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~ 354 (535)
.++.|+||.|.|+|++|+.+|+.|...|++|++ ||+.. -.. + ..+ ....+. +++
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~--------~d~~~--~~~--~----------~~~--~~~~~l~ell- 195 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIA--------YDPYP--MKG--D----------HPD--FDYVSLEDLF- 195 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC--CSS--C----------CTT--CEECCHHHHH-
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE--------ECCCc--chh--h----------Hhc--cccCCHHHHH-
Confidence 358999999999999999999999999999987 33333 100 0 000 111122 344
Q ss_pred ccceEEeeccccc-----ccccccccccc-ceEEEecCCCC-CCH-HHHHHHHhCCce
Q psy1913 355 DKVDILVPAAIEK-----VIRKSNADKVQ-AKIIVEAANGP-LTP-AAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~~~-----~It~~na~~i~-AkiIvEgAN~p-~T~-eA~~iL~~rGI~ 404 (535)
..|||++-|.... .|+.+-...++ -.+++..+-++ +.. ...+.|.+.+|.
T Consensus 196 ~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 196 KQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp HHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCcc
Confidence 3899999987643 35444445554 36777777777 443 344667777664
No 94
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.85 E-value=0.0093 Score=57.92 Aligned_cols=105 Identities=9% Similarity=0.123 Sum_probs=67.7
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD 355 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~ 355 (535)
+.+++|.|.|+|++|..+++.|.+.|..+|.+.| .+.+.+.+..+..| ....+. +++ .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~------------~~~~~~~~~~~~~g-------~~~~~~~~~~~-~ 67 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYS------------RTEESARELAQKVE-------AEYTTDLAEVN-P 67 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEEC------------SSHHHHHHHHHHTT-------CEEESCGGGSC-S
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEe------------CCHHHHHHHHHHcC-------CceeCCHHHHh-c
Confidence 4567999999999999999999999998555443 45566666555433 122222 444 3
Q ss_pred cceEEeeccccccccccccccc-----cceEEEecCCCCCCHHHHHHHHhCCc
Q psy1913 356 KVDILVPAAIEKVIRKSNADKV-----QAKIIVEAANGPLTPAAHAMLLKKNV 403 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~i-----~AkiIvEgAN~p~T~eA~~iL~~rGI 403 (535)
+||++|-|.....+ .+-+..+ .-++|+..+|+.......+.+.+.++
T Consensus 68 ~~Dvvi~av~~~~~-~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~~~~ 119 (266)
T 3d1l_A 68 YAKLYIVSLKDSAF-AELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPHYGV 119 (266)
T ss_dssp CCSEEEECCCHHHH-HHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSSEEE
T ss_pred CCCEEEEecCHHHH-HHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHhccC
Confidence 89999999987754 4333333 24688888887643333333333344
No 95
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=95.84 E-value=0.0055 Score=60.19 Aligned_cols=103 Identities=14% Similarity=0.050 Sum_probs=63.8
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|.|.|+|++|..+|+.|.+.|..|+. .| +.+.+.+..+. | ....+. +++ .+||
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~-~~-------------~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D 60 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHV-TT-------------IGPVADELLSL-G-------AVNVETARQVT-EFAD 60 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEE-CC-------------SSCCCHHHHTT-T-------CBCCSSHHHHH-HTCS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEE-Ec-------------CHHHHHHHHHc-C-------CcccCCHHHHH-hcCC
Confidence 5899999999999999999999998865 22 11222222221 2 121222 333 3799
Q ss_pred EEeeccccccccc-------ccccccc-ceEEEecCCCC-C-CHHHHHHHHhCCceee
Q psy1913 359 ILVPAAIEKVIRK-------SNADKVQ-AKIIVEAANGP-L-TPAAHAMLLKKNVLII 406 (535)
Q Consensus 359 ILiPaA~~~~It~-------~na~~i~-AkiIvEgAN~p-~-T~eA~~iL~~rGI~vi 406 (535)
+++-|........ +-.+.++ -++|+.-.|+. . +.+..+.+.++|+.++
T Consensus 61 ~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 61 IIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp EEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred EEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 9999985443222 1122333 46888888885 2 2445566778888776
No 96
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.84 E-value=0.086 Score=52.80 Aligned_cols=125 Identities=8% Similarity=0.087 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCC-eEEEEecCCceEeCCCCCCCCHHHHH
Q psy1913 252 GRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKDLH 330 (535)
Q Consensus 252 g~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaVsD~~G~iynp~G~dLDi~~L~ 330 (535)
+.|...+++ ..|. +++++++.|.|.|.+|+.++..|.+.|+ +|+. .+ -+.+...
T Consensus 110 ~~G~~~~L~----------~~~~--~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v-~~------------R~~~~a~ 164 (281)
T 3o8q_A 110 GEGLVQDLL----------AQQV--LLKGATILLIGAGGAARGVLKPLLDQQPASITV-TN------------RTFAKAE 164 (281)
T ss_dssp HHHHHHHHH----------HTTC--CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEE-EE------------SSHHHHH
T ss_pred HHHHHHHHH----------HhCC--CccCCEEEEECchHHHHHHHHHHHhcCCCeEEE-EE------------CCHHHHH
Confidence 677766665 2454 4789999999999999999999999997 5544 33 4455555
Q ss_pred HHHHHcCCcccCCCCcccCC-CCccccceEEeecccccccccc---cccccc-ceEEEecCCCC-CCHHHHHHHHhCCce
Q psy1913 331 TYKITKGTIKGYPGTKSAPT-DIMFDKVDILVPAAIEKVIRKS---NADKVQ-AKIIVEAANGP-LTPAAHAMLLKKNVL 404 (535)
Q Consensus 331 ~~~~~~g~v~~~~~a~~i~~-ell~~~~DILiPaA~~~~It~~---na~~i~-AkiIvEgAN~p-~T~eA~~iL~~rGI~ 404 (535)
+..++.+.. .....++. ++. .++||+|-|+.-+..... ....++ ..+|++-.=+| .|+-. +..+++|+.
T Consensus 165 ~la~~~~~~---~~~~~~~~~~l~-~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~ll-~~A~~~G~~ 239 (281)
T 3o8q_A 165 QLAELVAAY---GEVKAQAFEQLK-QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFN-QWARQHGCA 239 (281)
T ss_dssp HHHHHHGGG---SCEEEEEGGGCC-SCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCCHHH-HHHHHTTCS
T ss_pred HHHHHhhcc---CCeeEeeHHHhc-CCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCHHH-HHHHHCCCC
Confidence 555543211 01111222 332 689999988765432211 122343 46889998778 57765 456888985
Q ss_pred -ee
Q psy1913 405 -II 406 (535)
Q Consensus 405 -vi 406 (535)
++
T Consensus 240 ~~~ 242 (281)
T 3o8q_A 240 QAI 242 (281)
T ss_dssp EEE
T ss_pred EEE
Confidence 44
No 97
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.80 E-value=0.0071 Score=61.73 Aligned_cols=105 Identities=14% Similarity=0.147 Sum_probs=69.1
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|+||.|.|+|++|+.+|+.|...|++|++..-+.. ..++ ++ .+.+. .+- +++ .
T Consensus 136 ~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~---~~~~--~~---------------~~~~~--~~l~ell-~ 192 (315)
T 3pp8_A 136 TREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRK---SWPG--VE---------------SYVGR--EELRAFL-N 192 (315)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCC---CCTT--CE---------------EEESH--HHHHHHH-H
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCch---hhhh--hh---------------hhccc--CCHHHHH-h
Confidence 57899999999999999999999999999998432210 0111 10 00000 011 333 3
Q ss_pred cceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 356 KVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
.|||++-|.. .+.|+.+....++ -.+++..+-+++ . ....+.|.+..|.
T Consensus 193 ~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 249 (315)
T 3pp8_A 193 QTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLK 249 (315)
T ss_dssp TCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCcc
Confidence 7899988865 3456666666665 478999999984 3 3445678777664
No 98
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=95.79 E-value=0.0088 Score=59.56 Aligned_cols=106 Identities=14% Similarity=0.139 Sum_probs=66.7
Q ss_pred CCCcEEEEEccccHHHH-HHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc
Q psy1913 278 MENKTYIVQGFGNVGFH-AARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM 353 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~-~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell 353 (535)
++-.+|+|+|+|++|.. .++.|.+ .++++++|+| .|.+.+.+..++.|. ...++ +++
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d------------~~~~~~~~~a~~~~~-------~~~~~~~~ll 64 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFT------------PNKVKREKICSDYRI-------MPFDSIESLA 64 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEEC------------SCHHHHHHHHHHHTC-------CBCSCHHHHH
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEEC------------CCHHHHHHHHHHcCC-------CCcCCHHHHH
Confidence 34579999999999985 8888876 5889999876 556777776666542 11333 567
Q ss_pred cccceEEeeccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHhCCceeec
Q psy1913 354 FDKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPL--T-PAAHA---MLLKKNVLIIP 407 (535)
Q Consensus 354 ~~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~--T-~eA~~---iL~~rGI~viP 407 (535)
. ++|+++-|+... .+.+.+... ...++||= |+ | .++++ ..+++|+.+..
T Consensus 65 ~-~~D~V~i~tp~~-~h~~~~~~al~~gk~vl~EK---P~~~~~~~~~~l~~~a~~~g~~~~v 122 (308)
T 3uuw_A 65 K-KCDCIFLHSSTE-THYEIIKILLNLGVHVYVDK---PLASTVSQGEELIELSTKKNLNLMV 122 (308)
T ss_dssp T-TCSEEEECCCGG-GHHHHHHHHHHTTCEEEECS---SSSSSHHHHHHHHHHHHHHTCCEEE
T ss_pred h-cCCEEEEeCCcH-hHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 7 899999887544 333333222 23577773 32 2 34443 34566765543
No 99
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.79 E-value=0.096 Score=52.22 Aligned_cols=125 Identities=18% Similarity=0.197 Sum_probs=78.7
Q ss_pred HHHHHHH-HHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCC-eEEEEecCCceEeCCCCCCCCHHHH
Q psy1913 252 GRGVFTA-AEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKDL 329 (535)
Q Consensus 252 g~GV~~~-i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaVsD~~G~iynp~G~dLDi~~L 329 (535)
+.|...+ ++ ..|. +++++++.|.|.|.+|+.++..|.+.|+ +|+. .+ -+.+..
T Consensus 103 ~~G~~~~lL~----------~~~~--~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i-~~------------R~~~~a 157 (272)
T 3pwz_A 103 GIGLLRDIEE----------NLGE--PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVI-AN------------RDMAKA 157 (272)
T ss_dssp HHHHHHHHHT----------TSCC--CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEE-EC------------SCHHHH
T ss_pred HHHHHHHHHH----------HcCC--CccCCEEEEECccHHHHHHHHHHHHcCCCEEEE-Ee------------CCHHHH
Confidence 6776665 43 2344 4789999999999999999999999997 5544 33 445666
Q ss_pred HHHHHHcCCcccCCCCcccCC-CCccccceEEeecccccccccc---cccccc-ceEEEecCCCC-CCHHHHHHHHhCCc
Q psy1913 330 HTYKITKGTIKGYPGTKSAPT-DIMFDKVDILVPAAIEKVIRKS---NADKVQ-AKIIVEAANGP-LTPAAHAMLLKKNV 403 (535)
Q Consensus 330 ~~~~~~~g~v~~~~~a~~i~~-ell~~~~DILiPaA~~~~It~~---na~~i~-AkiIvEgAN~p-~T~eA~~iL~~rGI 403 (535)
.+..++.+. .....++- ++-..++||+|-|+.-+.-... ....++ ..+|++-.=+| -|+-.. .-+++|+
T Consensus 158 ~~la~~~~~----~~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~ll~-~A~~~G~ 232 (272)
T 3pwz_A 158 LALRNELDH----SRLRISRYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPFLR-LAREQGQ 232 (272)
T ss_dssp HHHHHHHCC----TTEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCHHHH-HHHHHSC
T ss_pred HHHHHHhcc----CCeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCHHHH-HHHHCCC
Confidence 666655432 01122222 3222689999988764432111 122333 46889988778 577544 4478887
Q ss_pred e-ee
Q psy1913 404 L-II 406 (535)
Q Consensus 404 ~-vi 406 (535)
. ++
T Consensus 233 ~~~~ 236 (272)
T 3pwz_A 233 ARLA 236 (272)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 5 44
No 100
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.79 E-value=0.014 Score=59.05 Aligned_cols=53 Identities=26% Similarity=0.348 Sum_probs=43.1
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHCCCeEEEEecC
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~GakVVaVsD~ 312 (535)
-.+.|.+|+...++ +.+. +++|++++|.|.|+ ||..+|.+|...|+.|+ |+.+
T Consensus 140 ~~PcTp~gv~~lL~----------~~~i--~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~hs 193 (285)
T 3l07_A 140 LESCTPKGIMTMLR----------EYGI--KTEGAYAVVVGASNVVGKPVSQLLLNAKATVT-TCHR 193 (285)
T ss_dssp CCCHHHHHHHHHHH----------HTTC--CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECT
T ss_pred CCCCCHHHHHHHHH----------HhCC--CCCCCEEEEECCCchhHHHHHHHHHHCCCeEE-EEeC
Confidence 36889999876665 3554 58999999999988 89999999999999864 4543
No 101
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.73 E-value=0.018 Score=59.14 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=66.6
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++.|++|.|.|+|++|+.+|+.|...|++|++ ||++..... +....+. +++
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~--------~dr~~~~~~------------------g~~~~~~l~ell- 213 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCPISY--------FSRSKKPNT------------------NYTYYGSVVELA- 213 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCCEEE--------ECSSCCTTC------------------CSEEESCHHHHH-
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEE--------ECCCchhcc------------------CceecCCHHHHH-
Confidence 68999999999999999999999999999876 333320000 1121222 333
Q ss_pred ccceEEeeccccc-----ccccccccccc-ceEEEecCCCCCC--HHHHHHHHhCCce
Q psy1913 355 DKVDILVPAAIEK-----VIRKSNADKVQ-AKIIVEAANGPLT--PAAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~~~-----~It~~na~~i~-AkiIvEgAN~p~T--~eA~~iL~~rGI~ 404 (535)
.+|||++-|...+ .|+.+....++ -.+|+..+.+++. .+..+.|.+.+|.
T Consensus 214 ~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ 271 (333)
T 3ba1_A 214 SNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLG 271 (333)
T ss_dssp HTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSC
T ss_pred hcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCe
Confidence 4899999987644 34333334443 3578888888843 4555677776664
No 102
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.71 E-value=0.011 Score=63.46 Aligned_cols=109 Identities=12% Similarity=0.117 Sum_probs=71.0
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH-HcCCcccCCCCcccCC--CCcc--c
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI-TKGTIKGYPGTKSAPT--DIMF--D 355 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~-~~g~v~~~~~a~~i~~--ell~--~ 355 (535)
++|.|.|+|++|..+|..|.+.|..|+. .|.+.+.+.+..+ +.. + .+....+. ++.. .
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v-------------~dr~~~~~~~l~~~~~~---g-~gi~~~~~~~e~v~~l~ 65 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCA-------------FNRTVSKVDDFLANEAK---G-TKVLGAHSLEEMVSKLK 65 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSSTHHHHHHHHTTTT---T-SSCEECSSHHHHHHHBC
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEE-------------EeCCHHHHHHHHhcccc---C-CCeEEeCCHHHHHhhcc
Confidence 5799999999999999999999998765 2244456655554 210 0 11222222 3443 3
Q ss_pred cceEEeeccccccccccccc----ccc-ceEEEecCCCCC--CHHHHHHHHhCCceee
Q psy1913 356 KVDILVPAAIEKVIRKSNAD----KVQ-AKIIVEAANGPL--TPAAHAMLLKKNVLII 406 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~----~i~-AkiIvEgAN~p~--T~eA~~iL~~rGI~vi 406 (535)
+||++|-|.....-..+.+. .++ -++|+...|+.. +.+..+.|.++|+.++
T Consensus 66 ~aDvVilaVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v 123 (482)
T 2pgd_A 66 KPRRIILLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV 123 (482)
T ss_dssp SSCEEEECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEe
Confidence 89999999876533333333 333 368999999873 3455667888898876
No 103
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=95.67 E-value=0.031 Score=56.21 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=64.6
Q ss_pred CCcEEEEEccccHHHHHHHHHH-H-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFR-R-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~-e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
+-.+|+|+|+|++|...++.|. + .+++||+|+| .+.+.+.+..++.|. ...++. +++.
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d------------~~~~~~~~~a~~~g~------~~~~~~~~~~l~ 68 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACA------------LDSNQLEWAKNELGV------ETTYTNYKDMID 68 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEEC------------SCHHHHHHHHHTTCC------SEEESCHHHHHT
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEec------------CCHHHHHHHHHHhCC------CcccCCHHHHhc
Confidence 4479999999999999999888 5 4889999876 556666666555432 122333 5554
Q ss_pred -ccceEEeeccccccccccccccc-c--ceEEEecCCCCC--C-HHHHHHH---HhC-Cceee
Q psy1913 355 -DKVDILVPAAIEKVIRKSNADKV-Q--AKIIVEAANGPL--T-PAAHAML---LKK-NVLII 406 (535)
Q Consensus 355 -~~~DILiPaA~~~~It~~na~~i-~--AkiIvEgAN~p~--T-~eA~~iL---~~r-GI~vi 406 (535)
.++|+++-|+.. ..+.+.+... + ..+++|- |+ + .++.++. +++ |+.+.
T Consensus 69 ~~~~D~V~i~tp~-~~h~~~~~~al~~G~~v~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~ 127 (346)
T 3cea_A 69 TENIDAIFIVAPT-PFHPEMTIYAMNAGLNVFCEK---PLGLDFNEVDEMAKVIKSHPNQIFQ 127 (346)
T ss_dssp TSCCSEEEECSCG-GGHHHHHHHHHHTTCEEEECS---CCCSCHHHHHHHHHHHHTCTTSCEE
T ss_pred CCCCCEEEEeCCh-HhHHHHHHHHHHCCCEEEEcC---CCCCCHHHHHHHHHHHHhCCCCeEE
Confidence 478998888753 3333333222 2 2466653 42 3 3444432 456 66554
No 104
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=95.64 E-value=0.013 Score=63.32 Aligned_cols=110 Identities=12% Similarity=0.123 Sum_probs=72.0
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH-HcCCcccCCCCcccCC--CCccc-
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI-TKGTIKGYPGTKSAPT--DIMFD- 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~-~~g~v~~~~~a~~i~~--ell~~- 355 (535)
..+|.|.|.|++|..+|+.|.+.|..|++ .|.+.+.+.+..+ +.+ + .+....+. ++...
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v-------------~dr~~~~~~~l~~~~~~---~-~gi~~~~s~~e~v~~l 72 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCA-------------YNRTQSKVDHFLANEAK---G-KSIIGATSIEDFISKL 72 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSSSHHHHHHHHTTTT---T-SSEECCSSHHHHHHTS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHccccc---C-CCeEEeCCHHHHHhcC
Confidence 35899999999999999999999999876 3355566666554 211 0 11221222 33321
Q ss_pred -cceEEeecccccccccccc----cccc-ceEEEecCCCCC--CHHHHHHHHhCCceee
Q psy1913 356 -KVDILVPAAIEKVIRKSNA----DKVQ-AKIIVEAANGPL--TPAAHAMLLKKNVLII 406 (535)
Q Consensus 356 -~~DILiPaA~~~~It~~na----~~i~-AkiIvEgAN~p~--T~eA~~iL~~rGI~vi 406 (535)
+||++|-|........+.+ +.++ -.+|+...|+.. |.+..+.|.++|+.++
T Consensus 73 ~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v 131 (497)
T 2p4q_A 73 KRPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFV 131 (497)
T ss_dssp CSSCEEEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCcee
Confidence 4999999887653333222 3333 379999999873 4455567888999876
No 105
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=95.64 E-value=0.015 Score=60.06 Aligned_cols=103 Identities=18% Similarity=0.175 Sum_probs=69.9
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|+||.|.|+|++|+.+|+.|...|++|++ ||+.. -. . . +. .....+. +++ .
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~--------~d~~~--~~--~----~-~~-------~~~~~~l~ell-~ 199 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIA--------YDVAY--NP--E----F-EP-------FLTYTDFDTVL-K 199 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC--CG--G----G-TT-------TCEECCHHHHH-H
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCCEEEE--------ECCCh--hh--h----h-hc-------cccccCHHHHH-h
Confidence 57899999999999999999999999999988 44443 10 0 0 00 1122222 343 4
Q ss_pred cceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 356 KVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
.|||++-|.. .+.|+.+....++ -.+++.-|-+++ . ....+.|.+..|.
T Consensus 200 ~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 256 (343)
T 2yq5_A 200 EADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIA 256 (343)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred cCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCc
Confidence 7999998876 3556655555564 368899999984 3 3445678777663
No 106
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=95.62 E-value=0.01 Score=61.95 Aligned_cols=105 Identities=15% Similarity=0.187 Sum_probs=70.1
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|+||.|.|+|++|+.+|+.|...|++|++ ||+.. ..+.. .+.| .+..+. +++ .
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~--------~d~~~---~~~~~----~~~g-------~~~~~l~ell-~ 229 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRARIRV--------FDPWL---PRSML----EENG-------VEPASLEDVL-T 229 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCCEEEE--------ECSSS---CHHHH----HHTT-------CEECCHHHHH-H
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCCEEEE--------ECCCC---CHHHH----hhcC-------eeeCCHHHHH-h
Confidence 57899999999999999999999999999987 44442 22211 1221 222222 443 4
Q ss_pred cceEEeecccc-----cccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q psy1913 356 KVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-T-PAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T-~eA~~iL~~rGI~ 404 (535)
.|||++-|..- +.|+.+....++ -.+++.-|-|++ . .+..+.|.+..|.
T Consensus 230 ~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 286 (365)
T 4hy3_A 230 KSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV 286 (365)
T ss_dssp SCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE
T ss_pred cCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce
Confidence 79999988663 356666556664 368889998884 3 3344667776654
No 107
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.57 E-value=0.028 Score=59.27 Aligned_cols=102 Identities=13% Similarity=0.182 Sum_probs=68.8
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++.|+|+.|.|+|++|+.+|+.|...|++|++ ||+.. -. ..+ +....+. +++
T Consensus 142 el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~--~~---------~~~------~~~~~~~l~ell- 195 (404)
T 1sc6_A 142 EARGKKLGIIGYGHIGTQLGILAESLGMYVYF--------YDIEN--KL---------PLG------NATQVQHLSDLL- 195 (404)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC--CC---------CCT------TCEECSCHHHHH-
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCCEEEE--------EcCCc--hh---------ccC------CceecCCHHHHH-
Confidence 58999999999999999999999999999987 44443 10 001 1222322 344
Q ss_pred ccceEEeecccc-----cccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q psy1913 355 DKVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI~ 404 (535)
..||+++-|... +.|+.+....++ -.+++..|-+.+ .. +..+.|.+..|.
T Consensus 196 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~ 253 (404)
T 1sc6_A 196 NMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLA 253 (404)
T ss_dssp HHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCcc
Confidence 478999988664 355555555555 368888888884 43 335667766553
No 108
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.56 E-value=0.0039 Score=53.81 Aligned_cols=32 Identities=28% Similarity=0.473 Sum_probs=27.8
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEE
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaV 309 (535)
+++++|+|.|+|.+|+.+++.|.+.|++|+.+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~ 35 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAV 35 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 45678999999999999999999999998873
No 109
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.55 E-value=0.018 Score=58.88 Aligned_cols=119 Identities=17% Similarity=0.218 Sum_probs=71.1
Q ss_pred CcEEEEEccccHHHHHHHHHHHC--------CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG--------RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT- 350 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~--------GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~- 350 (535)
-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++.....+. +|.+.+.+.... +.+..+... ..+.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~-~~d~~ 80 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER---IDIGKVISYKEK-GSLDSLEYE-SISAS 80 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT---CCHHHHHHHHHT-TCGGGCCSE-ECCHH
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc---cChHHHhhhhcc-CCcccccCC-CCCHH
Confidence 46899999999999999999764 479999999987776542 665555443322 222111110 0122
Q ss_pred CCccccceEEeeccccccccccccc-----ccc--ceEEEecCCC-CCCHHHHH---HHHhCCceee
Q psy1913 351 DIMFDKVDILVPAAIEKVIRKSNAD-----KVQ--AKIIVEAANG-PLTPAAHA---MLLKKNVLII 406 (535)
Q Consensus 351 ell~~~~DILiPaA~~~~It~~na~-----~i~--AkiIvEgAN~-p~T~eA~~---iL~~rGI~vi 406 (535)
+++..++||++.|+..+ -|.+.+. -++ ..+|++ |- |+..++.+ .-+++|+.+.
T Consensus 81 ~ll~~~iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvta--nK~pla~~~~eL~~~A~~~gv~~~ 144 (331)
T 3c8m_A 81 EALARDFDIVVDATPAS-ADGKKELAFYKETFENGKDVVTA--NKSGLANFWPEIMEYARSNNRRIR 144 (331)
T ss_dssp HHHHSSCSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHhCCCCCEEEECCCCC-CccchHHHHHHHHHHCCCeEEec--CchhhHHHHHHHHHHHHHcCCEEE
Confidence 45566899999999875 2333222 122 245542 32 33344444 3456787665
No 110
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.55 E-value=0.17 Score=53.91 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=35.6
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~ 334 (535)
++|+|.|.|.||..+|..|++.|..|++ .|.|.+.+..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~-------------~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRC-------------IDTDRNKIEQLNS 43 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEE-------------EECCHHHHHHHHc
Confidence 5899999999999999999999999998 5577777766655
No 111
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.54 E-value=0.089 Score=54.98 Aligned_cols=122 Identities=11% Similarity=0.147 Sum_probs=71.4
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCccc---------CCCC-cccCC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKG---------YPGT-KSAPT 350 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~---------~~~a-~~i~~ 350 (535)
++|+|.|.|.||..+|..|++ |..|++ .|.|.+.+..+.+..-.+.. .++. ...+.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~-------------~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~ 66 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTI-------------VDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLD 66 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEE-------------ECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEE-------------EECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCC
Confidence 379999999999999999999 999888 34666665554432111100 0000 11111
Q ss_pred --CCccccceEEeecccccc----------cccccccc---cc--ceEEEecCCCCC-CHHHHHHHHhCCceeecccccc
Q psy1913 351 --DIMFDKVDILVPAAIEKV----------IRKSNADK---VQ--AKIIVEAANGPL-TPAAHAMLLKKNVLIIPDIFAN 412 (535)
Q Consensus 351 --ell~~~~DILiPaA~~~~----------It~~na~~---i~--AkiIvEgAN~p~-T~eA~~iL~~rGI~viPD~laN 412 (535)
+. -.+||++|-|..... ...+-+.. ++ +-+|.+..|.|- +.+..+.+.++.|.+.|.++ .
T Consensus 67 ~~~~-~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~~~Pe~~-~ 144 (402)
T 1dlj_A 67 SKAA-YKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTDRIIFSPEFL-R 144 (402)
T ss_dssp HHHH-HHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCSCEEECCCCC-C
T ss_pred HHHH-hcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCCeEEECCccc-c
Confidence 11 137999999976552 01111111 22 234556999994 45555666666788888754 5
Q ss_pred ccCcch
Q psy1913 413 AGGVTV 418 (535)
Q Consensus 413 aGGViv 418 (535)
.|.++.
T Consensus 145 ~G~a~~ 150 (402)
T 1dlj_A 145 ESKALY 150 (402)
T ss_dssp TTSTTH
T ss_pred Ccchhh
Confidence 555443
No 112
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.49 E-value=0.019 Score=56.04 Aligned_cols=97 Identities=13% Similarity=0.225 Sum_probs=56.3
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCcccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDK 356 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell~~~ 356 (535)
+++|++|.|.|.|.||...++.|.+.|++|+.|+. +++ ++|.++.++ +.+.-.. ..+..+.+ ..
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap-----------~~~-~~l~~l~~~-~~i~~i~--~~~~~~dL-~~ 91 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP-----------TVS-AEINEWEAK-GQLRVKR--KKVGEEDL-LN 91 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS-----------SCC-HHHHHHHHT-TSCEEEC--SCCCGGGS-SS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC-----------CCC-HHHHHHHHc-CCcEEEE--CCCCHhHh-CC
Confidence 57999999999999999999999999999988662 244 345555543 3221110 01111122 36
Q ss_pred ceEEeeccccccccccccccccceEEEecCCCC
Q psy1913 357 VDILVPAAIEKVIRKSNADKVQAKIIVEAANGP 389 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p 389 (535)
+|++|-|+-...+|..-+..-+.++.|--+..|
T Consensus 92 adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~p 124 (223)
T 3dfz_A 92 VFFIVVATNDQAVNKFVKQHIKNDQLVNMASSF 124 (223)
T ss_dssp CSEEEECCCCTHHHHHHHHHSCTTCEEEC----
T ss_pred CCEEEECCCCHHHHHHHHHHHhCCCEEEEeCCc
Confidence 898887765555544333222233444444433
No 113
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.44 E-value=0.012 Score=59.53 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=49.0
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-cc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-DK 356 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~~ 356 (535)
.+|+|+|+|++|...++.|.+. +++|++|+| .|.+.+.+..++.+. ...+++ +++. .+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d------------~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~~ 64 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISD------------VREDRLREMKEKLGV------EKAYKDPHELIEDPN 64 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEEC------------SCHHHHHHHHHHHTC------SEEESSHHHHHHCTT
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEEC------------CCHHHHHHHHHHhCC------CceeCCHHHHhcCCC
Confidence 5899999999999999988874 789999875 556666666666542 122333 5554 47
Q ss_pred ceEEeecccc
Q psy1913 357 VDILVPAAIE 366 (535)
Q Consensus 357 ~DILiPaA~~ 366 (535)
+|+++-|+..
T Consensus 65 ~D~V~i~tp~ 74 (344)
T 3ezy_A 65 VDAVLVCSST 74 (344)
T ss_dssp CCEEEECSCG
T ss_pred CCEEEEcCCC
Confidence 8988888754
No 114
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.42 E-value=0.012 Score=55.65 Aligned_cols=105 Identities=12% Similarity=0.098 Sum_probs=64.6
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCc----ccc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIM----FDK 356 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell----~~~ 356 (535)
++|+|.|+|.+|+.+|+.|.+.|..|+.| |-|.+.+.++.+..+...-+..+. +.+.+ -.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vi-------------d~~~~~~~~l~~~~~~~~i~gd~~--~~~~l~~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVII-------------NKDRELCEEFAKKLKATIIHGDGS--HKEILRDAEVSK 65 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEE-------------ESCHHHHHHHHHHSSSEEEESCTT--SHHHHHHHTCCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEE-------------ECCHHHHHHHHHHcCCeEEEcCCC--CHHHHHhcCccc
Confidence 36999999999999999999999999984 366777766655433110000111 11222 247
Q ss_pred ceEEeeccccccccc---cccccc-c-ceEEEecCCCCCCHHHHHHHHhCCce
Q psy1913 357 VDILVPAAIEKVIRK---SNADKV-Q-AKIIVEAANGPLTPAAHAMLLKKNVL 404 (535)
Q Consensus 357 ~DILiPaA~~~~It~---~na~~i-~-AkiIvEgAN~p~T~eA~~iL~~rGI~ 404 (535)
||++|-|......+. ..+.++ . .++|+- +|.+ +..+.|++-|+-
T Consensus 66 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~-~~~~---~~~~~l~~~G~d 114 (218)
T 3l4b_C 66 NDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSL-VNDP---GNMEIFKKMGIT 114 (218)
T ss_dssp TCEEEECCSCHHHHHHHHHHHHHTSCCCEEEEC-CCSG---GGHHHHHHHTCE
T ss_pred CCEEEEecCCcHHHHHHHHHHHHHcCCCeEEEE-EeCc---chHHHHHHCCCC
Confidence 999998876554432 333332 2 356654 4433 445677888874
No 115
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.42 E-value=0.32 Score=52.33 Aligned_cols=201 Identities=17% Similarity=0.185 Sum_probs=105.2
Q ss_pred CcEEEEEccccHHHHHHHHHHHC-CC-eEEEEecCCceEeCCCCCCCCHH----HHHHHHHHcCCcccC-----------
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG-RA-KCLAIVEHDTAIVPDKGTEINYK----DLHTYKITKGTIKGY----------- 342 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~-Ga-kVVaVsD~~G~iynp~G~dLDi~----~L~~~~~~~g~v~~~----------- 342 (535)
-++|+|.|.|.||..+|..|++. |. .|++ .|+|.+ .+.++.+....+..|
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~-------------~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~ 84 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLG-------------FQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKV 84 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEE-------------ECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEE-------------EECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhh
Confidence 36999999999999999999999 99 9988 334444 443333211111000
Q ss_pred --CCCccc-CC-CCccccceEEeeccccccccccc---------------ccccc--ceEEEecCCCC-CCHHHH-HHH-
Q psy1913 343 --PGTKSA-PT-DIMFDKVDILVPAAIEKVIRKSN---------------ADKVQ--AKIIVEAANGP-LTPAAH-AML- 398 (535)
Q Consensus 343 --~~a~~i-~~-ell~~~~DILiPaA~~~~It~~n---------------a~~i~--AkiIvEgAN~p-~T~eA~-~iL- 398 (535)
++.-.. ++ +. -.+||++|-|..+..-...+ ++.++ +-+|.+..-.| +|.+.. .++
T Consensus 85 ~~~g~l~~ttd~ea-~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile 163 (478)
T 3g79_A 85 VKAGKFECTPDFSR-ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILE 163 (478)
T ss_dssp HHTTCEEEESCGGG-GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHH
T ss_pred cccCCeEEeCcHHH-HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHH
Confidence 111111 22 22 24899999998765421111 11121 34555665555 555554 467
Q ss_pred HhCC--------ceeeccccccccCcchhhHhhhhccccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhh
Q psy1913 399 LKKN--------VLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAM 470 (535)
Q Consensus 399 ~~rG--------I~viPD~laNaGGVivSy~Ew~qn~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 470 (535)
+++| +...|.++ +-|..+.....- ..+ --.-+++. .+.+..+.+.+ .+...-...+..
T Consensus 164 ~~~g~~~~~d~~v~~~Pe~~-~~G~a~~~~~~~----~~I-----v~G~~~~~-~~~~~~ly~~~---~~~~~~~~~~~~ 229 (478)
T 3g79_A 164 EESGLKAGEDFALAHAPERV-MVGRLLKNIREH----DRI-----VGGIDEAS-TKRAVELYSPV---LTVGQVIPMSAT 229 (478)
T ss_dssp HHHCCCBTTTBEEEECCCCC-CTTSHHHHHHHS----CEE-----EEESSHHH-HHHHHHHHGGG---CSSCCEEEEEHH
T ss_pred HhcCCCcCCceeEEeCCccC-CccchhhhhcCC----cEE-----EEeCCHHH-HHHHHHHHhhh---ccCCeEEeCCHH
Confidence 4455 45667655 444432222110 001 01113322 13333333332 011111122233
Q ss_pred HHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Q psy1913 471 YEDRISNATEKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAA 516 (535)
Q Consensus 471 ~~~~i~g~~e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~AA 516 (535)
.++.++ ++..-+-........++..+|++.+ +|...-.
T Consensus 230 ~aE~~K------l~~N~~~a~~Ia~~nE~~~l~e~~G--iD~~~v~ 267 (478)
T 3g79_A 230 AAEVTK------TAENTFRDLQIAAINQLALYCEAMG--INVYDVR 267 (478)
T ss_dssp HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHTT--CCHHHHH
T ss_pred HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHcC--CCHHHHH
Confidence 334444 6677777788888899999999985 6765543
No 116
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=95.35 E-value=0.021 Score=57.40 Aligned_cols=66 Identities=17% Similarity=0.158 Sum_probs=48.2
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-cc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-DK 356 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~~ 356 (535)
.+|+|+|+|++|...++.|.+. +++|++|+| .|.+.+.+..++.+ .. .+. +++. .+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d------------~~~~~~~~~~~~~~-------~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVAD------------AFPAAAEAIAGAYG-------CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC------------SSHHHHHHHHHHTT-------CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEEC------------CCHHHHHHHHHHhC-------CC-cCCHHHHhcCCC
Confidence 6899999999999999999885 899999876 55666666666553 12 333 5554 37
Q ss_pred ceEEeecccc
Q psy1913 357 VDILVPAAIE 366 (535)
Q Consensus 357 ~DILiPaA~~ 366 (535)
+|+++-|...
T Consensus 64 ~D~V~i~tp~ 73 (331)
T 4hkt_A 64 IDAVVICTPT 73 (331)
T ss_dssp CCEEEECSCG
T ss_pred CCEEEEeCCc
Confidence 8888877743
No 117
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.35 E-value=0.088 Score=52.24 Aligned_cols=131 Identities=16% Similarity=0.115 Sum_probs=78.3
Q ss_pred CchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHH
Q psy1913 249 SATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKD 328 (535)
Q Consensus 249 ~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~ 328 (535)
.-++.|+..+++. .+. +++++++.|.|.|.+|+.+|+.|.+.| +|+. ++-+.+.
T Consensus 109 nTd~~G~~~~L~~----------~~~--~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v-------------~~r~~~~ 162 (287)
T 1nvt_A 109 NTDGIGARMALEE----------EIG--RVKDKNIVIYGAGGAARAVAFELAKDN-NIII-------------ANRTVEK 162 (287)
T ss_dssp CCHHHHHHHHHHH----------HHC--CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEE-------------ECSSHHH
T ss_pred cCCHHHHHHHHHH----------hCC--CcCCCEEEEECchHHHHHHHHHHHHCC-CEEE-------------EECCHHH
Confidence 3488888877762 233 478999999999999999999999999 8776 2345555
Q ss_pred HHHHHHHcCCcccCC---CCcccC-CCCccccceEEeeccccccccc---c---cccccc-ceEEEecCCCC-CCHHHHH
Q psy1913 329 LHTYKITKGTIKGYP---GTKSAP-TDIMFDKVDILVPAAIEKVIRK---S---NADKVQ-AKIIVEAANGP-LTPAAHA 396 (535)
Q Consensus 329 L~~~~~~~g~v~~~~---~a~~i~-~ell~~~~DILiPaA~~~~It~---~---na~~i~-AkiIvEgAN~p-~T~eA~~ 396 (535)
+.+..++.+...... .....+ .+.+ .++||+|-|+.-..... . ....++ ..+|++-.-+| .|+-. +
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~d~~~~~~~~-~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~t~ll-~ 240 (287)
T 1nvt_A 163 AEALAKEIAEKLNKKFGEEVKFSGLDVDL-DGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVLL-K 240 (287)
T ss_dssp HHHHHHHHHHHHTCCHHHHEEEECTTCCC-TTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSCHHH-H
T ss_pred HHHHHHHHhhhcccccceeEEEeeHHHhh-CCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCccCHHH-H
Confidence 544443321000000 000001 1222 47899999987443211 0 123343 36788887667 46543 4
Q ss_pred HHHhCCceeec
Q psy1913 397 MLLKKNVLIIP 407 (535)
Q Consensus 397 iL~~rGI~viP 407 (535)
..+++|+.+++
T Consensus 241 ~a~~~G~~~~~ 251 (287)
T 1nvt_A 241 EAKKVNAKTIN 251 (287)
T ss_dssp HHHTTTCEEEC
T ss_pred HHHHCCCEEeC
Confidence 45788987543
No 118
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.35 E-value=0.015 Score=51.38 Aligned_cols=69 Identities=14% Similarity=0.232 Sum_probs=48.0
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKV 357 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~ 357 (535)
+++|.|.|.|++|+.+++.|.+.|++ |.|.| .+.+.+.++.++.+. .....+. +.+ .++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~------------r~~~~~~~~a~~~~~-----~~~~~~~~~~~~-~~~ 81 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAG------------RNIDHVRAFAEKYEY-----EYVLINDIDSLI-KNN 81 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEE------------SCHHHHHHHHHHHTC-----EEEECSCHHHHH-HTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc------------CCHHHHHHHHHHhCC-----ceEeecCHHHHh-cCC
Confidence 78999999999999999999999999 55443 556666666655441 0111222 222 479
Q ss_pred eEEeeccccc
Q psy1913 358 DILVPAAIEK 367 (535)
Q Consensus 358 DILiPaA~~~ 367 (535)
|++|-|+...
T Consensus 82 Divi~at~~~ 91 (144)
T 3oj0_A 82 DVIITATSSK 91 (144)
T ss_dssp SEEEECSCCS
T ss_pred CEEEEeCCCC
Confidence 9999998743
No 119
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.33 E-value=0.023 Score=56.86 Aligned_cols=104 Identities=14% Similarity=0.226 Sum_probs=64.1
Q ss_pred cEEEEEccccHHHHH-HHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-cc
Q psy1913 281 KTYIVQGFGNVGFHA-ARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-DK 356 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~-A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~~ 356 (535)
.+|+|+|+|++|... ++.|.+.+.++++|+| .|.+.+.+..++.|.. ..++. +++. .+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d------------~~~~~~~~~~~~~g~~------~~~~~~~~~l~~~~ 62 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMS------------TSAERGAAYATENGIG------KSVTSVEELVGDPD 62 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEEC------------SCHHHHHHHHHHTTCS------CCBSCHHHHHTCTT
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEEC------------CCHHHHHHHHHHcCCC------cccCCHHHHhcCCC
Confidence 379999999999987 7777778899999876 4556666666654421 12333 5554 47
Q ss_pred ceEEeecccccccccccccc-cc--ceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 357 VDILVPAAIEKVIRKSNADK-VQ--AKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~-i~--AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
+|+++-|+.... +.+.+.. ++ ..+++|- |+ | .++.++ .+++|+.+.
T Consensus 63 ~D~V~i~tp~~~-h~~~~~~al~~Gk~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~ 117 (332)
T 2glx_A 63 VDAVYVSTTNEL-HREQTLAAIRAGKHVLCEK---PLAMTLEDAREMVVAAREAGVVLG 117 (332)
T ss_dssp CCEEEECSCGGG-HHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCEEEEeCChhH-hHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 999998886433 3333322 22 2467763 42 2 344443 355676554
No 120
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.33 E-value=0.035 Score=59.13 Aligned_cols=202 Identities=14% Similarity=0.166 Sum_probs=109.9
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCccc----------CCCCccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKG----------YPGTKSA 348 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~----------~~~a~~i 348 (535)
+-++|+|.|.|.||..+|..|++ |..|++ .|+|.+.+.++.+..-.+.. ..+.+..
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~-------------~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~t 100 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVA-------------LDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRAT 100 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEE-------------ECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEE-------------EecCHHHhhHHhccCCccccccHHHHHhhccCCeEEE
Confidence 44699999999999999999998 999998 55777777665532111100 0011111
Q ss_pred CC-CCccccceEEeeccccccccc--------------ccccccc--ceEEEecCCCC-CCHHHHHHHHhCCceeecccc
Q psy1913 349 PT-DIMFDKVDILVPAAIEKVIRK--------------SNADKVQ--AKIIVEAANGP-LTPAAHAMLLKKNVLIIPDIF 410 (535)
Q Consensus 349 ~~-ell~~~~DILiPaA~~~~It~--------------~na~~i~--AkiIvEgAN~p-~T~eA~~iL~~rGI~viPD~l 410 (535)
+. +-.-.+||++|-|..++.-.. .-++ ++ +-+|.+..-.| +|.+..+.|.+.++.+.|.++
T Consensus 101 td~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v~~sPe~~ 179 (432)
T 3pid_A 101 TDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNVIFSPEFL 179 (432)
T ss_dssp SCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCEEECCCCC
T ss_pred cCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccEeecCccC
Confidence 11 111248999999977553111 1112 32 34555666666 567777888889999999876
Q ss_pred ccccCcchhhHhhhhccccccccccccccchhhHHHHHHhhhhhhhhh-hhhhhh-hcchhhHHHhhcccchHHHHHHHH
Q psy1913 411 ANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDT-FNKKIR-IQKSAMYEDRISNATEKDIVQSSL 488 (535)
Q Consensus 411 aNaGGVivSy~Ew~qn~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~-~~~~~~-~~~~~~~~~~i~g~~e~d~V~~~L 488 (535)
+.|+.+...+.- ..+--| -+.+.... +.+.+... ++.... ...+...++.++ ++..-+
T Consensus 180 -~~G~A~~~~l~p----~rIvvG-----~~~~~~~~----~~~ll~~~~~~~~~~v~~~~~~~AE~~K------l~~N~~ 239 (432)
T 3pid_A 180 -REGRALYDNLHP----SRIVIG-----ERSARAER----FADLLKEGAIKQDIPTLFTDSTEAEAIK------LFANTY 239 (432)
T ss_dssp -CTTSHHHHHHSC----SCEEES-----SCSHHHHH----HHHHHHHHCSSSSCCEEECCHHHHHHHH------HHHHHH
T ss_pred -CcchhhhcccCC----ceEEec-----CCHHHHHH----HHHHHHhhhccCCCeEEecCccHHHHHH------HHHHHH
Confidence 555543332210 001111 12222111 11111110 000000 011223333333 566667
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCHHHHHh
Q psy1913 489 THSMQRAGRDILEYAEKSDNKLDLRNAAY 517 (535)
Q Consensus 489 ~~~m~~a~~~v~~~a~~~~~~~~lR~AAy 517 (535)
-......+.++..+|++.+ +|..+-.-
T Consensus 240 ~a~~Ia~~nEl~~lae~~G--iD~~~v~~ 266 (432)
T 3pid_A 240 LALRVAYFNELDSYAESQG--LNSKQIIE 266 (432)
T ss_dssp HHHHHHHHHHHHHHHHHTT--CCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcC--CCHHHHHH
Confidence 7777788889999999885 67655433
No 121
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.26 E-value=0.017 Score=58.31 Aligned_cols=67 Identities=13% Similarity=0.208 Sum_probs=49.2
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-cc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-DK 356 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~~ 356 (535)
.+|+|+|+|++|...++.|.+. +++|++|+| .|.+.+.+..++.| ...++. +++. .+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d------------~~~~~~~~~a~~~g-------~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIAD------------PFIEGAQRLAEANG-------AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC------------SSHHHHHHHHHTTT-------CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEEC------------CCHHHHHHHHHHcC-------CceeCCHHHHhcCCC
Confidence 6899999999999999999885 889999875 55666666666544 222333 5554 57
Q ss_pred ceEEeecccc
Q psy1913 357 VDILVPAAIE 366 (535)
Q Consensus 357 ~DILiPaA~~ 366 (535)
+|+++-|...
T Consensus 66 ~D~V~i~tp~ 75 (344)
T 3euw_A 66 IDGIVIGSPT 75 (344)
T ss_dssp CCEEEECSCG
T ss_pred CCEEEEeCCc
Confidence 8988888743
No 122
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.25 E-value=0.029 Score=54.16 Aligned_cols=109 Identities=20% Similarity=0.283 Sum_probs=67.6
Q ss_pred cEEEEEccccHHHHHHHHHHHCCC----eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRA----KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~Ga----kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++|.|.|+|++|..+++.|.+.|. .|+. .|.+.+.+.+..++.| ....+. +.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~-------------~~r~~~~~~~~~~~~g-------~~~~~~~~e~~- 61 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIIC-------------SDLNTANLKNASEKYG-------LTTTTDNNEVA- 61 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEE-------------ECSCHHHHHHHHHHHC-------CEECSCHHHHH-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEE-------------EeCCHHHHHHHHHHhC-------CEEeCChHHHH-
Confidence 589999999999999999999998 8776 4466777777665543 222222 333
Q ss_pred ccceEEeecccccccccccccc----cc-ceEEEecCCCCCCHHHHHHHHh--CCceeeccccc
Q psy1913 355 DKVDILVPAAIEKVIRKSNADK----VQ-AKIIVEAANGPLTPAAHAMLLK--KNVLIIPDIFA 411 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~----i~-AkiIvEgAN~p~T~eA~~iL~~--rGI~viPD~la 411 (535)
.+|||+|-|.....+. +-+.. ++ -++|+--+++-......+.|.. +-+.+.|+.-+
T Consensus 62 ~~aDvVilav~~~~~~-~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~ 124 (247)
T 3gt0_A 62 KNADILILSIKPDLYA-SIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPA 124 (247)
T ss_dssp HHCSEEEECSCTTTHH-HHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGG
T ss_pred HhCCEEEEEeCHHHHH-HHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHH
Confidence 4799999998544332 22222 33 3577765655443444455532 23455675433
No 123
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.21 E-value=0.026 Score=56.81 Aligned_cols=105 Identities=10% Similarity=0.120 Sum_probs=65.9
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCC-eEEEEecCCceEeCCCCCCCC--HHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEIN--YKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaVsD~~G~iynp~G~dLD--i~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
-++|+|+|+|++|..+|+.|.+.|. .|+. .|.+ .+.+... .+.| ....+. +++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~-------------~dr~~~~~~~~~~-~~~g-------~~~~~~~~e~~- 81 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAA-------------YDAASAESWRPRA-EELG-------VSCKASVAEVA- 81 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEE-------------ECSSCHHHHHHHH-HHTT-------CEECSCHHHHH-
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEE-------------EcCCCCHHHHHHH-HHCC-------CEEeCCHHHHH-
Confidence 4699999999999999999999999 7776 3343 2333333 3332 222222 333
Q ss_pred ccceEEeecccccccccccccc----c-cceEEEecCCCC--CCHHHHHHHHhC--Cceeec
Q psy1913 355 DKVDILVPAAIEKVIRKSNADK----V-QAKIIVEAANGP--LTPAAHAMLLKK--NVLIIP 407 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~----i-~AkiIvEgAN~p--~T~eA~~iL~~r--GI~viP 407 (535)
.+|||+|-|........ .+.. + .-++|+...... ++.+..+.+.++ |+.++.
T Consensus 82 ~~aDvVi~~vp~~~~~~-~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALE-VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp HHCSEEEECSCTTTHHH-HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred hcCCEEEEecCchhHHH-HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 47999999987655432 2222 3 235777665544 344555667788 888764
No 124
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.21 E-value=0.019 Score=47.68 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=27.3
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCC-CeEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGR-AKCLA 308 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~G-akVVa 308 (535)
.+++|+|.|.|.+|+.+++.|.+.| .+|++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~ 34 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTV 34 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 4689999999999999999999999 78776
No 125
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=95.20 E-value=0.051 Score=54.81 Aligned_cols=109 Identities=15% Similarity=0.208 Sum_probs=69.7
Q ss_pred CCcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD 355 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~ 355 (535)
..++|.|.|+|++|+..++.|.+. |.+-|.|. |.+.+.+.+..++.+. .....+. +++ .
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~------------dr~~~~~~~l~~~~~~-----~~~~~~~~~e~v-~ 195 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIW------------NRTKENAEKFADTVQG-----EVRVCSSVQEAV-A 195 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEE------------CSSHHHHHHHHHHSSS-----CCEECSSHHHHH-T
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEE------------cCCHHHHHHHHHHhhC-----CeEEeCCHHHHH-h
Confidence 578999999999999999999875 87444433 3556777766665431 1122222 333 3
Q ss_pred cceEEeecccc--cccccccccccc--ceEEEecCCCCCCHHHHHHHHhCCceeecc
Q psy1913 356 KVDILVPAAIE--KVIRKSNADKVQ--AKIIVEAANGPLTPAAHAMLLKKNVLIIPD 408 (535)
Q Consensus 356 ~~DILiPaA~~--~~It~~na~~i~--AkiIvEgAN~p~T~eA~~iL~~rGI~viPD 408 (535)
+|||++-|... .++.. +.++ +-++.-+.+.|-..|..+.+.++|+.|+-+
T Consensus 196 ~aDiVi~atp~~~~v~~~---~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~ 249 (312)
T 2i99_A 196 GADVIITVTLATEPILFG---EWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDS 249 (312)
T ss_dssp TCSEEEECCCCSSCCBCG---GGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEESC
T ss_pred cCCEEEEEeCCCCcccCH---HHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEECC
Confidence 68999988752 22222 2333 344555788886666666778889876644
No 126
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.18 E-value=0.037 Score=56.12 Aligned_cols=98 Identities=12% Similarity=0.181 Sum_probs=64.2
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|++|.|.|+|++|+.+|+.|...|++|++ ||+...... + ...+. +++ .
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~--------~d~~~~~~~-------------~------~~~~l~ell-~ 192 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGMRVVY--------HARTPKPLP-------------Y------PFLSLEELL-K 192 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSCCSSS-------------S------CBCCHHHHH-H
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCCEEEE--------ECCCCcccc-------------c------ccCCHHHHH-h
Confidence 58999999999999999999999999999876 333320011 0 00111 333 4
Q ss_pred cceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCc
Q psy1913 356 KVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-TP-AAHAMLLKKNV 403 (535)
Q Consensus 356 ~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T~-eA~~iL~~rGI 403 (535)
.|||++-|.. .+.|+.+....++ -.+++.-+.+++ .. +..+.|. ..|
T Consensus 193 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i 247 (311)
T 2cuk_A 193 EADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHL 247 (311)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTS
T ss_pred hCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcC
Confidence 7899998854 3455555555664 357888888874 43 3445665 443
No 127
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.15 E-value=0.024 Score=55.63 Aligned_cols=102 Identities=12% Similarity=0.172 Sum_probs=60.4
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|+|.|+|++|..+|+.|.+.|..|+. .|.+.+.+.+..+. | ....+. +++ .+||
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~-------------~~~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D 58 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLII-------------YDVFPDACKEFQDA-G-------EQVVSSPADVA-EKAD 58 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEE-------------ECSSTHHHHHHHTT-T-------CEECSSHHHHH-HHCS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHHc-C-------CeecCCHHHHH-hcCC
Confidence 3699999999999999999999998775 22444555444332 2 222222 333 3799
Q ss_pred EEeecccccccccccc-------cccc-ceEEEecCCCCCCH---HHHHHHHhCCcee
Q psy1913 359 ILVPAAIEKVIRKSNA-------DKVQ-AKIIVEAANGPLTP---AAHAMLLKKNVLI 405 (535)
Q Consensus 359 ILiPaA~~~~It~~na-------~~i~-AkiIvEgAN~p~T~---eA~~iL~~rGI~v 405 (535)
+++-|........+-+ +.++ -++|+. .++-... +..+.+.++|+.+
T Consensus 59 vvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~g~~~ 115 (296)
T 2gf2_A 59 RIITMLPTSINAIEAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKMGAVF 115 (296)
T ss_dssp EEEECCSSHHHHHHHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHTTCEE
T ss_pred EEEEeCCCHHHHHHHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHcCCEE
Confidence 9999975332222211 2232 368888 5543222 2234566777654
No 128
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.13 E-value=0.023 Score=56.98 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=64.0
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKV 357 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~ 357 (535)
.+|+|+|+|++|...++.|.+. ++++++|+| .+.+...+..++.|. ....++ +++..++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d------------~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~ 63 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYS------------RKLETAATFASRYQN------IQLFDQLEVFFKSSF 63 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEEC------------SSHHHHHHHGGGSSS------CEEESCHHHHHTSSC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEe------------CCHHHHHHHHHHcCC------CeEeCCHHHHhCCCC
Confidence 4899999999999999999875 689999875 445555555544432 122333 4555578
Q ss_pred eEEeecccccccccccccc-cc--ceEEEecCCCCCC-HHHHHH---HHhCCceee
Q psy1913 358 DILVPAAIEKVIRKSNADK-VQ--AKIIVEAANGPLT-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 358 DILiPaA~~~~It~~na~~-i~--AkiIvEgAN~p~T-~eA~~i---L~~rGI~vi 406 (535)
|+++-|+... .+.+.+.. ++ ..+++|-- ..+| .++.++ .+++|+.+.
T Consensus 64 D~V~i~tp~~-~h~~~~~~al~~gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~ 117 (325)
T 2ho3_A 64 DLVYIASPNS-LHFAQAKAALSAGKHVILEKP-AVSQPQEWFDLIQTAEKNNCFIF 117 (325)
T ss_dssp SEEEECSCGG-GHHHHHHHHHHTTCEEEEESS-CCSSHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEeCChH-HHHHHHHHHHHcCCcEEEecC-CcCCHHHHHHHHHHHHHcCCEEE
Confidence 9999887643 33333322 22 24777731 1123 334433 356676554
No 129
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.06 E-value=0.11 Score=52.16 Aligned_cols=121 Identities=17% Similarity=0.128 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHH
Q psy1913 252 GRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHT 331 (535)
Q Consensus 252 g~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~ 331 (535)
+.|+..+++ ..|+ +++++++.|.|.|.+|+.++..|.+.|++-|.|.++ +.+...+
T Consensus 106 ~~G~~~~L~----------~~~~--~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR------------t~~ka~~ 161 (282)
T 3fbt_A 106 YIGFGKMLS----------KFRV--EIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR------------NPEKTSE 161 (282)
T ss_dssp HHHHHHHHH----------HTTC--CCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES------------CHHHHHH
T ss_pred HHHHHHHHH----------HcCC--CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC------------CHHHHHH
Confidence 677776665 2354 478999999999999999999999999944444433 3444444
Q ss_pred HHHHcCCcccCCCCcccCC--CCccccceEEeeccccccccc---c--cccccc-ceEEEecCCCC-CCHHHHHHHHhCC
Q psy1913 332 YKITKGTIKGYPGTKSAPT--DIMFDKVDILVPAAIEKVIRK---S--NADKVQ-AKIIVEAANGP-LTPAAHAMLLKKN 402 (535)
Q Consensus 332 ~~~~~g~v~~~~~a~~i~~--ell~~~~DILiPaA~~~~It~---~--na~~i~-AkiIvEgAN~p-~T~eA~~iL~~rG 402 (535)
+.++.. ...++. + + ++||+|-|+.-+.-.. . ....++ ..+|++-.=+| -|+=... -+++|
T Consensus 162 La~~~~-------~~~~~~l~~-l--~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll~~-A~~~G 230 (282)
T 3fbt_A 162 IYGEFK-------VISYDELSN-L--KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLFLKY-ARESG 230 (282)
T ss_dssp HCTTSE-------EEEHHHHTT-C--CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCHHHHH-HHHTT
T ss_pred HHHhcC-------cccHHHHHh-c--cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCHHHHH-HHHCc
Confidence 332211 111122 3 2 8999998875443221 1 112232 47899999888 5765443 36788
Q ss_pred ceeec
Q psy1913 403 VLIIP 407 (535)
Q Consensus 403 I~viP 407 (535)
+.+++
T Consensus 231 ~~~~~ 235 (282)
T 3fbt_A 231 VKAVN 235 (282)
T ss_dssp CEEEC
T ss_pred CeEeC
Confidence 76653
No 130
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.05 E-value=0.24 Score=53.02 Aligned_cols=40 Identities=13% Similarity=0.225 Sum_probs=32.7
Q ss_pred cEEEEEccccHHHHHHHHHHHC--CCeEEEEecCCceEeCCCCCCCCHHHHHHHH
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG--RAKCLAIVEHDTAIVPDKGTEINYKDLHTYK 333 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~--GakVVaVsD~~G~iynp~G~dLDi~~L~~~~ 333 (535)
++|+|.|.|.||..+|..|++. |..|++ .|.|.+.+..+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~-------------~D~~~~~v~~l~ 51 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTV-------------VDMNTAKIAEWN 51 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEE-------------ECSCHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEE-------------EECCHHHHHHHH
Confidence 5899999999999999999998 789988 446666665543
No 131
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.04 E-value=0.047 Score=53.76 Aligned_cols=99 Identities=13% Similarity=0.195 Sum_probs=62.3
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
.+|+|.|+|++|+.+++.+.+.+..||++.|.++. . .. +....+. +++ ++|
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~-----~-------------~~-------gv~v~~dl~~l~--~~D 56 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPK-----A-------------TT-------PYQQYQHIADVK--GAD 56 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC--------------------C-------CSCBCSCTTTCT--TCS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCcc-----c-------------cC-------CCceeCCHHHHh--CCC
Confidence 68999999999999999999875599998876532 0 01 1222233 444 899
Q ss_pred EEeecccccccccccccccc--ceEEEecCCCCCCHHHHHHHH----hCCceeecccc
Q psy1913 359 ILVPAAIEKVIRKSNADKVQ--AKIIVEAANGPLTPAAHAMLL----KKNVLIIPDIF 410 (535)
Q Consensus 359 ILiPaA~~~~It~~na~~i~--AkiIvEgAN~p~T~eA~~iL~----~rGI~viPD~l 410 (535)
|+|-++.++... +|+. ++ ..+|++-. | .+++-.+.|. +.+|++.|-+.
T Consensus 57 VvIDft~p~a~~-~~~~-l~~g~~vVigTT-G-~s~e~~~~l~~aa~~~~v~~a~N~S 110 (243)
T 3qy9_A 57 VAIDFSNPNLLF-PLLD-EDFHLPLVVATT-G-EKEKLLNKLDELSQNMPVFFSANMS 110 (243)
T ss_dssp EEEECSCHHHHH-HHHT-SCCCCCEEECCC-S-SHHHHHHHHHHHTTTSEEEECSSCC
T ss_pred EEEEeCChHHHH-HHHH-HhcCCceEeCCC-C-CCHHHHHHHHHHHhcCCEEEECCcc
Confidence 999888766554 4554 54 45666433 3 4554333332 34566666554
No 132
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.02 E-value=0.046 Score=55.46 Aligned_cols=108 Identities=10% Similarity=0.121 Sum_probs=66.5
Q ss_pred CcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc-cc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM-FD 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell-~~ 355 (535)
..+|+|+|+|++|...++.|.+. +++|++|+| .|.+.+.+..++.|. ...++ +++ ..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d------------~~~~~~~~~~~~~g~-------~~~~~~~~~l~~~ 65 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYS------------RTEDKREKFGKRYNC-------AGDATMEALLARE 65 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEC------------SSHHHHHHHHHHHTC-------CCCSSHHHHHHCS
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEEC------------CCHHHHHHHHHHcCC-------CCcCCHHHHhcCC
Confidence 46999999999999999999886 899999876 556666666665531 11233 566 35
Q ss_pred cceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHhCCceeec
Q psy1913 356 KVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAM---LLKKNVLIIP 407 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~i---L~~rGI~viP 407 (535)
++|+++-|... ..+.+.+... ...++||--=.....+++++ .+++|+.+..
T Consensus 66 ~~D~V~i~tp~-~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v 122 (354)
T 3db2_A 66 DVEMVIITVPN-DKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLC 122 (354)
T ss_dssp SCCEEEECSCT-TSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEE
T ss_pred CCCEEEEeCCh-HHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 78998887754 3344433322 23577774111112344433 4556665543
No 133
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=94.99 E-value=0.024 Score=57.62 Aligned_cols=105 Identities=13% Similarity=0.257 Sum_probs=67.0
Q ss_pred CCcEEEEEccccHHHHHHHHHHHC--CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRG--RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~--GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
+-.+|+|+|+|++|...++.|.+. +++|++|+| .|.+.+.+..++.| ....++ +++.
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d------------~~~~~~~~~~~~~~-------~~~~~~~~~ll~ 72 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCD------------IDPAALKAAVERTG-------ARGHASLTDMLA 72 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEEC------------SSHHHHHHHHHHHC-------CEEESCHHHHHH
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEc------------CCHHHHHHHHHHcC-------CceeCCHHHHhc
Confidence 347999999999999989999876 899999875 55677777666654 223334 5664
Q ss_pred -ccceEEeeccccccccccccccc---cceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 355 -DKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 355 -~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
.++|+++-|.... .+.+.+... ...+++|= |+ | .++.++ .+++|+.+.
T Consensus 73 ~~~~D~V~i~tp~~-~h~~~~~~al~~gk~v~~EK---P~a~~~~~~~~l~~~a~~~g~~~~ 130 (354)
T 3q2i_A 73 QTDADIVILTTPSG-LHPTQSIECSEAGFHVMTEK---PMATRWEDGLEMVKAADKAKKHLF 130 (354)
T ss_dssp HCCCSEEEECSCGG-GHHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCEEEECCCcH-HHHHHHHHHHHCCCCEEEeC---CCcCCHHHHHHHHHHHHHhCCeEE
Confidence 5789988877543 343333222 23667763 42 2 344433 455666554
No 134
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.93 E-value=0.012 Score=62.64 Aligned_cols=116 Identities=8% Similarity=0.049 Sum_probs=66.5
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-----CCc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-----DIM 353 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-----ell 353 (535)
++++|.|.|.|.+|+++++.|.+.|++|+. +| -+.+.+.+..+..+.+..+. . .+++ +++
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v-~~------------R~~~~a~~la~~~~~~~~~~-~-Dv~d~~~l~~~l 66 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTV-AC------------RTLESAKKLSAGVQHSTPIS-L-DVNDDAALDAEV 66 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEE-EE------------SSHHHHHHTTTTCTTEEEEE-C-CTTCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEE-EE------------CCHHHHHHHHHhcCCceEEE-e-ecCCHHHHHHHH
Confidence 468999999999999999999999999665 33 44555544332222110000 0 0111 223
Q ss_pred cccceEEeecccccccccccc-cccc--ceEEEecCCCCCCHHHHHHHHhCCceeeccccc
Q psy1913 354 FDKVDILVPAAIEKVIRKSNA-DKVQ--AKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFA 411 (535)
Q Consensus 354 ~~~~DILiPaA~~~~It~~na-~~i~--AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~la 411 (535)
.++|++|-|+.... +...+ ..+. ..++.+....|.+.+..+..+++|+.+++.+-.
T Consensus 67 -~~~DvVIn~a~~~~-~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~ 125 (450)
T 1ff9_A 67 -AKHDLVISLIPYTF-HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGL 125 (450)
T ss_dssp -TTSSEEEECCC--C-HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBB
T ss_pred -cCCcEEEECCcccc-chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCC
Confidence 37999999996432 22111 1233 356666443443334445567899988766543
No 135
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=94.87 E-value=0.054 Score=55.18 Aligned_cols=111 Identities=14% Similarity=0.197 Sum_probs=68.8
Q ss_pred CCCcEEEEEccccHHH-HHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc
Q psy1913 278 MENKTYIVQGFGNVGF-HAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM 353 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~-~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell 353 (535)
++-.+|+|+|+|++|. ..++.|.+. +++|++|+| .|.+...+..++.| ...++. +++
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d------------~~~~~~~~~a~~~g-------~~~~~~~~~ll 85 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIAS------------RRWDRAKRFTERFG-------GEPVEGYPALL 85 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEE------------SSHHHHHHHHHHHC-------SEEEESHHHHH
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEc------------CCHHHHHHHHHHcC-------CCCcCCHHHHh
Confidence 4557999999999998 678888776 899999876 45566666666553 222233 566
Q ss_pred c-ccceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHhCCceeecc
Q psy1913 354 F-DKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAM---LLKKNVLIIPD 408 (535)
Q Consensus 354 ~-~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~i---L~~rGI~viPD 408 (535)
. .++|+++-|... ..+.+.+... ...++||=-=.....+++++ .+++|+.+...
T Consensus 86 ~~~~~D~V~i~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 86 ERDDVDAVYVPLPA-VLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp TCTTCSEEEECCCG-GGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCCEEEECCCc-HHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 4 478999887753 3444443332 23677874111122345443 45677766543
No 136
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.84 E-value=0.23 Score=52.19 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=33.5
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~ 334 (535)
++|+|.|.|.||..+|..|++.|..|++ .|.|.+.+..+.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~-------------~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIG-------------VDVSSTKIDLINQ 41 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEE-------------EECCHHHHHHHhC
Confidence 3799999999999999999999999888 4466666655543
No 137
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.80 E-value=0.033 Score=55.31 Aligned_cols=109 Identities=18% Similarity=0.188 Sum_probs=68.0
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCC---eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRA---KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~Ga---kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
.++|.|+|+|++|..+++.|.+.|. .|+. .|.+.+.+.+..++.| ....+. +.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v-------------~dr~~~~~~~l~~~~g-------i~~~~~~~~~~- 61 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICV-------------TNRSLDKLDFFKEKCG-------VHTTQDNRQGA- 61 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEE-------------ECSSSHHHHHHHHTTC-------CEEESCHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEE-------------EeCCHHHHHHHHHHcC-------CEEeCChHHHH-
Confidence 4789999999999999999999997 6665 3355566666665432 222222 333
Q ss_pred ccceEEeecccccccccccccc-----ccce-EEEecCCCCCCHHHHHHHHh--CCceeecccc
Q psy1913 355 DKVDILVPAAIEKVIRKSNADK-----VQAK-IIVEAANGPLTPAAHAMLLK--KNVLIIPDIF 410 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~-----i~Ak-iIvEgAN~p~T~eA~~iL~~--rGI~viPD~l 410 (535)
.+|||+|.|.....+. +-... ++.+ +|+--+++-......+.|.. +=|.+.|-.-
T Consensus 62 ~~aDvVilav~p~~~~-~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p 124 (280)
T 3tri_A 62 LNADVVVLAVKPHQIK-MVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTP 124 (280)
T ss_dssp SSCSEEEECSCGGGHH-HHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGG
T ss_pred hcCCeEEEEeCHHHHH-HHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCCh
Confidence 4799999998665443 22222 3444 77776665544444455542 2244556543
No 138
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.78 E-value=0.056 Score=55.04 Aligned_cols=54 Identities=28% Similarity=0.341 Sum_probs=43.5
Q ss_pred CCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHCCCeEEEEecC
Q psy1913 246 GRESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 246 gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~GakVVaVsD~ 312 (535)
+-.+.|.+|+...++ +.+. +++|++++|.|.|+ ||..+|.+|...|+.|. |+++
T Consensus 143 ~~~PcTp~gv~~lL~----------~~~i--~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~~~ 197 (300)
T 4a26_A 143 PFTPCTAKGVIVLLK----------RCGI--EMAGKRAVVLGRSNIVGAPVAALLMKENATVT-IVHS 197 (300)
T ss_dssp SCCCHHHHHHHHHHH----------HHTC--CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECT
T ss_pred CCCCCCHHHHHHHHH----------HcCC--CCCCCEEEEECCCchHHHHHHHHHHHCCCeEE-EEeC
Confidence 346889999876666 3454 58999999999988 89999999999999865 4544
No 139
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=94.77 E-value=0.031 Score=57.22 Aligned_cols=103 Identities=17% Similarity=0.205 Sum_probs=68.0
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++.|++|.|.|+|++|+.+|+.|...|++|++ ||+.. +.. + ++ . .+..+. +++
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~--------~d~~~---~~~-~----~~-~-------~~~~~~l~ell- 197 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGAKVIT--------YDIFR---NPE-L----EK-K-------GYYVDSLDDLY- 197 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC---CHH-H----HH-T-------TCBCSCHHHHH-
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCCEEEE--------ECCCc---chh-H----Hh-h-------CeecCCHHHHH-
Confidence 57899999999999999999999999999987 44443 111 1 11 1 111222 444
Q ss_pred ccceEEeecccc-----cccccccccccc-ceEEEecCCCC-CC-HHHHHHHHhCCce
Q psy1913 355 DKVDILVPAAIE-----KVIRKSNADKVQ-AKIIVEAANGP-LT-PAAHAMLLKKNVL 404 (535)
Q Consensus 355 ~~~DILiPaA~~-----~~It~~na~~i~-AkiIvEgAN~p-~T-~eA~~iL~~rGI~ 404 (535)
..|||++-|... +.|+.+-...++ -.+++.-+-++ +. ....+.|.+..|.
T Consensus 198 ~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ 255 (333)
T 1j4a_A 198 KQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIF 255 (333)
T ss_dssp HHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 489999998763 334444444554 36777777777 44 3445678877665
No 140
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=94.76 E-value=0.14 Score=52.19 Aligned_cols=133 Identities=14% Similarity=0.099 Sum_probs=77.8
Q ss_pred hHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHH
Q psy1913 251 TGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLH 330 (535)
Q Consensus 251 Tg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~ 330 (535)
-+.|...+++ ..|. +++|+++.|.|.|.+|+.++..|.+.|++-|.|.+++ + =+.+...
T Consensus 137 D~~Gf~~~L~----------~~~~--~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~-------~--~~~~~a~ 195 (315)
T 3tnl_A 137 DGTGYMRALK----------EAGH--DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRK-------D--DFYANAE 195 (315)
T ss_dssp HHHHHHHHHH----------HTTC--CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS-------S--TTHHHHH
T ss_pred CHHHHHHHHH----------HcCC--CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC-------C--chHHHHH
Confidence 4778776665 2344 4799999999999999999999999999444444432 1 1145555
Q ss_pred HHHHHcCCcccCCCCcc--cCC--CCc--cccceEEeeccccccccc---c---cccccc-ceEEEecCCCC-CCHHHHH
Q psy1913 331 TYKITKGTIKGYPGTKS--APT--DIM--FDKVDILVPAAIEKVIRK---S---NADKVQ-AKIIVEAANGP-LTPAAHA 396 (535)
Q Consensus 331 ~~~~~~g~v~~~~~a~~--i~~--ell--~~~~DILiPaA~~~~It~---~---na~~i~-AkiIvEgAN~p-~T~eA~~ 396 (535)
+..++.+...+. .... ++. ++- -.++||+|-|+.-+.-.. . ....++ ..+|++-.=+| -|+=...
T Consensus 196 ~la~~~~~~~~~-~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~ll~~ 274 (315)
T 3tnl_A 196 KTVEKINSKTDC-KAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEI 274 (315)
T ss_dssp HHHHHHHHHSSC-EEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCHHHHH
T ss_pred HHHHHhhhhcCC-ceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCHHHHH
Confidence 544332110000 0111 111 111 137899998775332211 1 222343 46889999998 5775443
Q ss_pred HHHhCCceee
Q psy1913 397 MLLKKNVLII 406 (535)
Q Consensus 397 iL~~rGI~vi 406 (535)
-+++|+.++
T Consensus 275 -A~~~G~~~~ 283 (315)
T 3tnl_A 275 -AEEQGCQTL 283 (315)
T ss_dssp -HHHTTCEEE
T ss_pred -HHHCCCeEe
Confidence 367887654
No 141
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.75 E-value=0.025 Score=56.37 Aligned_cols=104 Identities=11% Similarity=0.132 Sum_probs=63.7
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|+|.|+|++|..+|+.|.+.|..|+. .| .+.+.+.+..+ .| ....+. +.+ .+||
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~-~~------------~~~~~~~~~~~-~g-------~~~~~~~~~~~-~~~D 88 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTV-WN------------RTAEKCDLFIQ-EG-------ARLGRTPAEVV-STCD 88 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEE-EC------------SSGGGGHHHHH-TT-------CEECSCHHHHH-HHCS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEE-Ee------------CCHHHHHHHHH-cC-------CEEcCCHHHHH-hcCC
Confidence 6899999999999999999999998765 22 33333333332 22 122222 333 3799
Q ss_pred EEeecccccccccccc-------cccc-ceEEEecCCCCC--CHHHHHHHHhCCceee
Q psy1913 359 ILVPAAIEKVIRKSNA-------DKVQ-AKIIVEAANGPL--TPAAHAMLLKKNVLII 406 (535)
Q Consensus 359 ILiPaA~~~~It~~na-------~~i~-AkiIvEgAN~p~--T~eA~~iL~~rGI~vi 406 (535)
+++-|........+-+ +.++ -++|+..+|... ..+..+.+.++|+.++
T Consensus 89 vVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v 146 (316)
T 2uyy_A 89 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFL 146 (316)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9999987332222211 2232 368888888642 2334456667888776
No 142
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=94.74 E-value=0.17 Score=50.58 Aligned_cols=128 Identities=12% Similarity=-0.003 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHH
Q psy1913 252 GRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHT 331 (535)
Q Consensus 252 g~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~ 331 (535)
+.|...+++. .+. +++++++.|.|.|.+|+.++..|.+.|++-|.|.+ -+.++..+
T Consensus 111 ~~G~~~~l~~----------~~~--~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~------------R~~~~a~~ 166 (283)
T 3jyo_A 111 VSGFGRGMEE----------GLP--NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVAD------------LDTSRAQA 166 (283)
T ss_dssp HHHHHHHHHH----------HCT--TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEEC------------SSHHHHHH
T ss_pred HHHHHHHHHH----------hCc--CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEE------------CCHHHHHH
Confidence 6777766652 232 47899999999999999999999999995344443 34455444
Q ss_pred HHHHcCCcccCCC--CcccCC-CCc--cccceEEeeccccccccc----ccccccc-ceEEEecCCCC-CCHHHHHHHHh
Q psy1913 332 YKITKGTIKGYPG--TKSAPT-DIM--FDKVDILVPAAIEKVIRK----SNADKVQ-AKIIVEAANGP-LTPAAHAMLLK 400 (535)
Q Consensus 332 ~~~~~g~v~~~~~--a~~i~~-ell--~~~~DILiPaA~~~~It~----~na~~i~-AkiIvEgAN~p-~T~eA~~iL~~ 400 (535)
..++.+.. +++ ...++. ++- -.++||+|-|+.-+.-.. -....++ ..+|++-.=+| -|+-... -++
T Consensus 167 la~~~~~~--~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll~~-A~~ 243 (283)
T 3jyo_A 167 LADVINNA--VGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELLKA-ARA 243 (283)
T ss_dssp HHHHHHHH--HTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSCHHHHH-HHH
T ss_pred HHHHHHhh--cCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCCHHHHH-HHH
Confidence 43332100 011 111221 221 137899998875332211 1122332 46889999998 5775443 356
Q ss_pred CCceee
Q psy1913 401 KNVLII 406 (535)
Q Consensus 401 rGI~vi 406 (535)
+|+.++
T Consensus 244 ~G~~~~ 249 (283)
T 3jyo_A 244 LGCETL 249 (283)
T ss_dssp HTCCEE
T ss_pred CcCeEe
Confidence 787654
No 143
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.73 E-value=0.033 Score=58.79 Aligned_cols=105 Identities=18% Similarity=0.209 Sum_probs=69.2
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCc----cc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIM----FD 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell----~~ 355 (535)
+.+|+|.|||.+|+.+++.|.+.|..|++ -|.|.+.+..+.+. |.-.-|-+++ +.++| -.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvv-------------Id~d~~~v~~~~~~-g~~vi~GDat--~~~~L~~agi~ 67 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVV-------------LDHDPDHIETLRKF-GMKVFYGDAT--RMDLLESAGAA 67 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE-------------EECCHHHHHHHHHT-TCCCEESCTT--CHHHHHHTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEE-------------EECCHHHHHHHHhC-CCeEEEcCCC--CHHHHHhcCCC
Confidence 45799999999999999999999999998 44788887766543 3111111111 11333 24
Q ss_pred cceEEeeccccccccc---ccccccc--ceEEEecCCCCCCHHHHHHHHhCCce
Q psy1913 356 KVDILVPAAIEKVIRK---SNADKVQ--AKIIVEAANGPLTPAAHAMLLKKNVL 404 (535)
Q Consensus 356 ~~DILiPaA~~~~It~---~na~~i~--AkiIvEgAN~p~T~eA~~iL~~rGI~ 404 (535)
+||++|-|.-....+. ..+.++. .++|+-+.| ++....|.+-|+.
T Consensus 68 ~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~----~~~~~~L~~~Gad 117 (413)
T 3l9w_A 68 KAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARD----VDHYIRLRQAGVE 117 (413)
T ss_dssp TCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEEESS----HHHHHHHHHTTCS
T ss_pred ccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEEECC----HHHHHHHHHCCCC
Confidence 7899998886544332 3333332 478876654 5666788999974
No 144
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.72 E-value=0.079 Score=53.59 Aligned_cols=91 Identities=16% Similarity=0.199 Sum_probs=59.7
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC--eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA--KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
.-++|.|+|+|++|..+|+.|.+.|. +|++ .|.+.+.+....+ .|.+. ...+. ++.-
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~-------------~dr~~~~~~~a~~-~G~~~-----~~~~~~~~~~~ 92 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-------------YDINPESISKAVD-LGIID-----EGTTSIAKVED 92 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEE-------------ECSCHHHHHHHHH-TTSCS-----EEESCTTGGGG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEE-------------EECCHHHHHHHHH-CCCcc-----hhcCCHHHHhh
Confidence 34799999999999999999999998 8887 5566676655543 33211 11222 3134
Q ss_pred ccceEEeecccccccccccccc----cc-ceEEEecCCCC
Q psy1913 355 DKVDILVPAAIEKVIRKSNADK----VQ-AKIIVEAANGP 389 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~----i~-AkiIvEgAN~p 389 (535)
.+||++|-|.....+. +-+.. ++ -.+|+.-+...
T Consensus 93 ~~aDvVilavp~~~~~-~vl~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 93 FSPDFVMLSSPVRTFR-EIAKKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp GCCSEEEECSCGGGHH-HHHHHHHHHSCTTCEEEECCSCC
T ss_pred ccCCEEEEeCCHHHHH-HHHHHHhhccCCCcEEEECCCCc
Confidence 5899999998876543 22222 32 25777765443
No 145
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=94.71 E-value=0.047 Score=58.30 Aligned_cols=126 Identities=18% Similarity=0.244 Sum_probs=77.7
Q ss_pred HhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCC--eEEEEec----CCceEeCCCCCCCCHHHHHHHHHHcCCcccCCC
Q psy1913 271 EIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA--KCLAIVE----HDTAIVPDKGTEINYKDLHTYKITKGTIKGYPG 344 (535)
Q Consensus 271 ~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD----~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~ 344 (535)
..|. ++++++|+|.|.|..|..+++.|.+.|+ +=|.|.| ++|.++..+. + +.|..++........ .
T Consensus 179 ~~g~--~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~--~--~~L~~~~~~~a~~~~--~ 250 (439)
T 2dvm_A 179 VVGK--KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLD--L--EKLFPYRGWLLKKTN--G 250 (439)
T ss_dssp HHTC--CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSC--H--HHHSTTCHHHHTTSC--T
T ss_pred HhCC--CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccc--h--hHHHHHHHHHhhccc--c
Confidence 4564 4789999999999999999999999998 5455677 8887665422 2 223222221110000 0
Q ss_pred CcccCC--CCccccceEEeecccc--cccccccccccc-ceEEEecCCCCCCHHHHHHHHhCCceee
Q psy1913 345 TKSAPT--DIMFDKVDILVPAAIE--KVIRKSNADKVQ-AKIIVEAANGPLTPAAHAMLLKKNVLII 406 (535)
Q Consensus 345 a~~i~~--ell~~~~DILiPaA~~--~~It~~na~~i~-AkiIvEgAN~p~T~eA~~iL~~rGI~vi 406 (535)
...... +.+ .++||||=|+.. +.++++....+. -.+|..-+|-.-|+-.++. +++|..++
T Consensus 251 ~~~~~~L~e~l-~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A-~~~G~~iv 315 (439)
T 2dvm_A 251 ENIEGGPQEAL-KDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEA-KKAGARIV 315 (439)
T ss_dssp TCCCSSHHHHH-TTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHH-HHHTCSEE
T ss_pred ccccccHHHHh-ccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHH-HHcCCeEE
Confidence 000111 222 368999999997 888876666564 3689999775445444343 33476554
No 146
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.67 E-value=0.037 Score=58.56 Aligned_cols=116 Identities=19% Similarity=0.225 Sum_probs=68.3
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCC-----C-------
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYP-----G------- 344 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~-----~------- 344 (535)
.+.+.+|+|.|+|.+|..+|+.+...|++|++ .|.+...+....+-...+...+ .
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v-------------~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSA-------------TDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSSTTHHHHHHHTTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEE-------------EcCCHHHHHHHHHcCCceeecccccccccccccch
Confidence 45789999999999999999999999999876 4444445444433211111100 0
Q ss_pred CcccCCC-------Cc---cccceEEeeccc------cccccccccccccc-eEEEecC-----CCCCCHHHHHHHHhCC
Q psy1913 345 TKSAPTD-------IM---FDKVDILVPAAI------EKVIRKSNADKVQA-KIIVEAA-----NGPLTPAAHAMLLKKN 402 (535)
Q Consensus 345 a~~i~~e-------ll---~~~~DILiPaA~------~~~It~~na~~i~A-kiIvEgA-----N~p~T~eA~~iL~~rG 402 (535)
+..++++ .+ -.++||+|-|++ ...||.+-+..++. .+|+.-| |-.+|. ....+..+|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~-~~~~~~~~G 332 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAE-AGKVTEVGG 332 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCC-TTEEEEETT
T ss_pred hhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccC-CCCeEEECC
Confidence 0001110 11 258999998864 34578888887763 6777665 333441 122234566
Q ss_pred ceee
Q psy1913 403 VLII 406 (535)
Q Consensus 403 I~vi 406 (535)
|.++
T Consensus 333 V~~~ 336 (405)
T 4dio_A 333 VRIV 336 (405)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
No 147
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.64 E-value=0.063 Score=53.88 Aligned_cols=107 Identities=20% Similarity=0.228 Sum_probs=63.7
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC-ccc--CCCC----cccCC--C
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT-IKG--YPGT----KSAPT--D 351 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~-v~~--~~~a----~~i~~--e 351 (535)
++|+|.|.|.+|..+|..|.+.|..|+. .|-+.+.+.+..+..+. +.+ ++.. ...+. +
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~-------------~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLA-------------WDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL 71 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEE-------------EeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHH
Confidence 6899999999999999999999999876 23555666655554321 111 1000 11122 2
Q ss_pred CccccceEEeeccccccccccccccc----c-ceEEEecCC-CCCCHHHHHHHHhCC
Q psy1913 352 IMFDKVDILVPAAIEKVIRKSNADKV----Q-AKIIVEAAN-GPLTPAAHAMLLKKN 402 (535)
Q Consensus 352 ll~~~~DILiPaA~~~~It~~na~~i----~-AkiIvEgAN-~p~T~eA~~iL~~rG 402 (535)
.+ .+||++|-|...... .+-+..+ + -.+|+.-.| ++-+.+..+.|.++|
T Consensus 72 ~~-~~~D~vi~~v~~~~~-~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~~~~l~~~~ 126 (359)
T 1bg6_A 72 AV-KDADVILIVVPAIHH-ASIAANIASYISEGQLIILNPGATGGALEFRKILRENG 126 (359)
T ss_dssp HH-TTCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEESSCCSSHHHHHHHHHHHTT
T ss_pred HH-hcCCEEEEeCCchHH-HHHHHHHHHhCCCCCEEEEcCCCchHHHHHHHHHHhcC
Confidence 22 389999999876654 3333333 2 134444444 444445456677765
No 148
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.54 E-value=0.078 Score=54.41 Aligned_cols=147 Identities=14% Similarity=0.114 Sum_probs=80.9
Q ss_pred CCCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCC
Q psy1913 246 GRESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEI 324 (535)
Q Consensus 246 gr~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dL 324 (535)
+-.+.|.+|++..++..--+...+ -.|. ++.|++|+|.|.|+ ||..+|++|...|+.| .|+|.+..-.-..+..+
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~-~~g~--~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtV-tv~nR~~~~l~~ra~~l 221 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLL-PEGN--RLYGKKCIVINRSEIVGRPLAALLANDGATV-YSVDVNNIQKFTRGESL 221 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTS-CTTC--TTTTCEEEEECCCTTTHHHHHHHHHTTSCEE-EEECSSEEEEEESCCCS
T ss_pred CcCCCcHHHHHHHHHhhccccccc-ccCC--CCCCCEEEEECCCcchHHHHHHHHHHCCCEE-EEEeCchHHHHhHHHHH
Confidence 446889999876665210000000 0343 58999999999996 6999999999999985 46666532221111001
Q ss_pred CHHHHHHHHHHcCCcccCCCCccc--C--CCC--ccccceEEeecccc-c-cccccccccccceEEEecCCCC-CCHHHH
Q psy1913 325 NYKDLHTYKITKGTIKGYPGTKSA--P--TDI--MFDKVDILVPAAIE-K-VIRKSNADKVQAKIIVEAANGP-LTPAAH 395 (535)
Q Consensus 325 Di~~L~~~~~~~g~v~~~~~a~~i--~--~el--l~~~~DILiPaA~~-~-~It~~na~~i~AkiIvEgAN~p-~T~eA~ 395 (535)
- .. ....+.+ + .++ .-..+||+|-|+.. + +|+.+-... ..+|+.-|-.+ +.+++
T Consensus 222 a-----------~~---~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk~--GavVIDVgi~rD~d~~v- 284 (320)
T 1edz_A 222 K-----------LN---KHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKE--GAVCINFACTKNFSDDV- 284 (320)
T ss_dssp S-----------CC---CCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCT--TEEEEECSSSCCBCGGG-
T ss_pred h-----------hh---cccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHHcCC--CeEEEEcCCCcccchhH-
Confidence 0 00 0000000 1 112 12478999999873 3 488777533 35777777665 32332
Q ss_pred HHHHhCCceeeccccccccCcchhh
Q psy1913 396 AMLLKKNVLIIPDIFANAGGVTVSY 420 (535)
Q Consensus 396 ~iL~~rGI~viPD~laNaGGVivSy 420 (535)
.++--.+.|- -|-+|++.
T Consensus 285 ---~~~a~~itPv----VGpmT~a~ 302 (320)
T 1edz_A 285 ---KEKASLYVPM----TGKVTIAM 302 (320)
T ss_dssp ---GTTEEEEESC----CHHHHHHH
T ss_pred ---HhhCCeeCCC----ccHHHHHH
Confidence 2333345563 45555543
No 149
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=94.49 E-value=0.066 Score=53.95 Aligned_cols=109 Identities=11% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCcEEEEEccccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF- 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~- 354 (535)
+-.+|+|+|+|++|...++.|.+ .+++|++|+|. |.+.+.+..++.+.. ...+. +++.
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~------------~~~~~~~~~~~~~~~------~~~~~~~~ll~~ 65 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR------------RLENAQKMAKELAIP------VAYGSYEELCKD 65 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS------------SSHHHHHHHHHTTCC------CCBSSHHHHHHC
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC------------CHHHHHHHHHHcCCC------ceeCCHHHHhcC
Confidence 45799999999999999999988 57899998764 345566666554321 22333 5554
Q ss_pred ccceEEeeccccccccccccccc-c--ceEEEecCCCCC--C-HHHHHH---HHhCCceeeccc
Q psy1913 355 DKVDILVPAAIEKVIRKSNADKV-Q--AKIIVEAANGPL--T-PAAHAM---LLKKNVLIIPDI 409 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~i-~--AkiIvEgAN~p~--T-~eA~~i---L~~rGI~viPD~ 409 (535)
.++|+++-|+... .+.+.+... + ..++||- |+ | .++.++ .+++|+.+...+
T Consensus 66 ~~~D~V~i~tp~~-~h~~~~~~al~~gk~vl~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~~ 125 (330)
T 3e9m_A 66 ETIDIIYIPTYNQ-GHYSAAKLALSQGKPVLLEK---PFTLNAAEAEELFAIAQEQGVFLMEAQ 125 (330)
T ss_dssp TTCSEEEECCCGG-GHHHHHHHHHHTTCCEEECS---SCCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CCCCEEEEcCCCH-HHHHHHHHHHHCCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 4789988887544 333333222 2 3577774 42 2 344433 456676655433
No 150
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=94.45 E-value=0.06 Score=54.30 Aligned_cols=67 Identities=7% Similarity=0.043 Sum_probs=46.5
Q ss_pred cEEEEEccccHHH-HHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-c
Q psy1913 281 KTYIVQGFGNVGF-HAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-D 355 (535)
Q Consensus 281 ~~VaIQGfGnVG~-~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~ 355 (535)
.||+|+|+|.+|+ +.+..|.+ .+++|+||+| .|.+...+..++.|-- ..+++ ++|+ .
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d------------~~~~~a~~~a~~~g~~------~~y~d~~ell~~~ 85 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIAS------------RDLTRAREMADRFSVP------HAFGSYEEMLASD 85 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEEC------------SSHHHHHHHHHHHTCS------EEESSHHHHHHCS
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEEC------------CCHHHHHHHHHHcCCC------eeeCCHHHHhcCC
Confidence 5999999999996 56777776 4899999976 5677777777776521 22233 4553 3
Q ss_pred cceEEeeccc
Q psy1913 356 KVDILVPAAI 365 (535)
Q Consensus 356 ~~DILiPaA~ 365 (535)
++|+++-|+.
T Consensus 86 ~iDaV~I~tP 95 (350)
T 4had_A 86 VIDAVYIPLP 95 (350)
T ss_dssp SCSEEEECSC
T ss_pred CCCEEEEeCC
Confidence 5677766653
No 151
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.42 E-value=1.3 Score=47.03 Aligned_cols=199 Identities=13% Similarity=0.166 Sum_probs=106.1
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCc------------
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTK------------ 346 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~------------ 346 (535)
.|.+..|.|.|.||..+|..|++.|..|++ -|+|.+.+.++.+..-.+ .-|+-+
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~-------------~D~~~~kv~~L~~g~~pi-~epgl~~ll~~~~~~g~l 75 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLG-------------VDINQQTIDKLQNGQISI-EEPGLQEVYEEVLSSGKL 75 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHTTCCSS-CCTTHHHHHHHHHHTTCE
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEE-------------EECCHHHHHHHHCCCCCc-CCCCHHHHHHhhcccCce
Confidence 477899999999999999999999999999 668888877765432111 111111
Q ss_pred ccCCCCccccceEEeeccccccccc---------------ccccccc--ceEEEecCCCC-CCHHHH-HHHHhCC-----
Q psy1913 347 SAPTDIMFDKVDILVPAAIEKVIRK---------------SNADKVQ--AKIIVEAANGP-LTPAAH-AMLLKKN----- 402 (535)
Q Consensus 347 ~i~~ell~~~~DILiPaA~~~~It~---------------~na~~i~--AkiIvEgAN~p-~T~eA~-~iL~~rG----- 402 (535)
..+.++ .+||++|-|-....-.. .-++.++ +-+|.+..-.| +|.+.. .+++++|
T Consensus 76 ~~ttd~--~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~ 153 (431)
T 3ojo_A 76 KVSTTP--EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGE 153 (431)
T ss_dssp EEESSC--CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTT
T ss_pred EEeCch--hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCC
Confidence 111122 37999998876543211 0112222 34555555555 345543 4566677
Q ss_pred ---ceeeccccccccCcchhhHhhhhccccccccccccccchhhHHHHHHhhhhhhhhhhhhhhhhcchhhHHHhhcccc
Q psy1913 403 ---VLIIPDIFANAGGVTVSYFEWLKNISHSSLGRMSFGYDKEISDLLLSSIDTSLSDTFNKKIRIQKSAMYEDRISNAT 479 (535)
Q Consensus 403 ---I~viPD~laNaGGVivSy~Ew~qn~~~~~~grl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~g~~ 479 (535)
+..-|.++ +-|..+.... +...+-- .-++ +..+.+..+.+.+ +...-...+...++.++
T Consensus 154 d~~v~~~Pe~~-~~G~A~~~~~----~p~~Iv~-----G~~~-~~~~~~~~ly~~~----~~~~~~~~~~~~AE~~K--- 215 (431)
T 3ojo_A 154 DIYLVHCPERV-LPGKILEELV----HNNRIIG-----GVTK-ACIEAGKRVYRTF----VQGEMIETDARTAEMSK--- 215 (431)
T ss_dssp TEEEEECCCCC-CTTSHHHHHH----HSCEEEE-----ESSH-HHHHHHHHHHTTT----CCSCEEEEEHHHHHHHH---
T ss_pred CeEEEECCCcC-CCcchhhccc----CCCEEEE-----eCCH-HHHHHHHHHHHHH----hCCcEEeCCHHHHHHHH---
Confidence 45667654 3343222111 1111101 1122 1222333333322 11111122334444444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Q psy1913 480 EKDIVQSSLTHSMQRAGRDILEYAEKSDNKLDLRNAA 516 (535)
Q Consensus 480 e~d~V~~~L~~~m~~a~~~v~~~a~~~~~~~~lR~AA 516 (535)
++..-+-.......+++..+|++.+ +|...-.
T Consensus 216 ---l~~N~~~a~~Ia~~nE~~~l~e~~G--iD~~~v~ 247 (431)
T 3ojo_A 216 ---LMENTYRDVNIALANELTKICNNLN--INVLDVI 247 (431)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHTT--CCHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHcC--CCHHHHH
Confidence 5666677777788889999999985 6755443
No 152
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=94.33 E-value=0.029 Score=56.04 Aligned_cols=106 Identities=9% Similarity=0.048 Sum_probs=63.0
Q ss_pred CCcEEEEEccccHHHH-HHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 279 ENKTYIVQGFGNVGFH-AARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~-~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
+-.+|+|+|+|++|+. .++.|.+ .+++|++|+|.+ .+.+.+..++.|. ...+. +.+..
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~------------~~~~~~~~~~~g~-------~~~~~~~~l~~ 64 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT------------RAKALPICESWRI-------PYADSLSSLAA 64 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS------------CTTHHHHHHHHTC-------CBCSSHHHHHT
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC------------HHHHHHHHHHcCC-------CccCcHHHhhc
Confidence 3479999999999985 8887776 578999988753 1223334444331 12233 32356
Q ss_pred cceEEeecccccccccccccc-cc--ceEEEecCCCCC--C-HHHHHH---HHhCCceeec
Q psy1913 356 KVDILVPAAIEKVIRKSNADK-VQ--AKIIVEAANGPL--T-PAAHAM---LLKKNVLIIP 407 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~-i~--AkiIvEgAN~p~--T-~eA~~i---L~~rGI~viP 407 (535)
++|+++-|+.. ..+.+.+.. ++ ..+++|- |+ | .+++++ .+++|+.+..
T Consensus 65 ~~D~V~i~tp~-~~h~~~~~~al~~G~~v~~eK---P~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 65 SCDAVFVHSST-ASHFDVVSTLLNAGVHVCVDK---PLAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp TCSEEEECSCT-THHHHHHHHHHHTTCEEEEES---SSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEeCCc-hhHHHHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 89999987753 334444332 22 2577874 42 3 344443 4567876654
No 153
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.22 E-value=0.046 Score=52.05 Aligned_cols=90 Identities=19% Similarity=0.185 Sum_probs=57.7
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccce
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVD 358 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~D 358 (535)
-++|+|.|.|++|..+|+.|.+.|..|+.+.|. +.+.+.+..++.|.. ...+. +. -.+||
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r------------~~~~~~~l~~~~g~~------~~~~~~~~-~~~aD 83 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSR------------GPASLSSVTDRFGAS------VKAVELKD-ALQAD 83 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTT------------CGGGGHHHHHHHTTT------EEECCHHH-HTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC------------CHHHHHHHHHHhCCC------cccChHHH-HhcCC
Confidence 368999999999999999999999988875543 333444444443310 01122 22 24789
Q ss_pred EEeecccccccccccccc---ccceEEEecCCCC
Q psy1913 359 ILVPAAIEKVIRKSNADK---VQAKIIVEAANGP 389 (535)
Q Consensus 359 ILiPaA~~~~It~~na~~---i~AkiIvEgAN~p 389 (535)
++|-|.....+. +-+.. ++-++|+..+|+-
T Consensus 84 vVilavp~~~~~-~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 84 VVILAVPYDSIA-DIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp EEEEESCGGGHH-HHHTTCSCCTTCEEEECCCCB
T ss_pred EEEEeCChHHHH-HHHHHhhccCCCEEEEcCCCC
Confidence 999887644332 22222 3457888888875
No 154
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.20 E-value=1.2 Score=47.15 Aligned_cols=28 Identities=18% Similarity=0.135 Sum_probs=26.2
Q ss_pred cEEEEEccccHHHHHHHHHHHC--CCeEEE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG--RAKCLA 308 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~--GakVVa 308 (535)
++|+|.|.|.||..+|..|++. |.+|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~ 35 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTV 35 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEE
Confidence 5899999999999999999998 789887
No 155
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.20 E-value=0.033 Score=58.49 Aligned_cols=31 Identities=23% Similarity=0.117 Sum_probs=28.8
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
+.+++|.|.|+|.+|..+++.+...|++|++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v 200 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRA 200 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 5789999999999999999999999998776
No 156
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.17 E-value=0.033 Score=58.47 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=29.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
.+.+.+|+|.|+|.+|..+|+.+...|++|++
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v 212 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAKTTG 212 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCEEEE
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCEEEE
Confidence 35789999999999999999999999999876
No 157
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=94.13 E-value=0.064 Score=54.96 Aligned_cols=109 Identities=11% Similarity=0.153 Sum_probs=67.9
Q ss_pred CCcEEEEEccccHHH-HHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-
Q psy1913 279 ENKTYIVQGFGNVGF-HAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF- 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~-~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~- 354 (535)
+-.+|+|+|+|..+. ..+..|...+++|++|+| .|.+...+..++.+. ...+++ ++++
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d------------~~~~~a~~~a~~~~~------~~~~~~~~~ll~~ 86 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHE------------KDDALAAEFSAVYAD------ARRIATAEEILED 86 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEEC------------SCHHHHHHHHHHSSS------CCEESCHHHHHTC
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEc------------CCHHHHHHHHHHcCC------CcccCCHHHHhcC
Confidence 347999999999984 567777788999999976 567777777776542 223344 5665
Q ss_pred ccceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHhCCceee
Q psy1913 355 DKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAM---LLKKNVLII 406 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~i---L~~rGI~vi 406 (535)
.++|+++-|+. +..+.+-+... ...++||=-=.....+++++ .+++|+.+.
T Consensus 87 ~~vD~V~I~tp-~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~ 143 (361)
T 3u3x_A 87 ENIGLIVSAAV-SSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFS 143 (361)
T ss_dssp TTCCEEEECCC-HHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEE
T ss_pred CCCCEEEEeCC-hHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 46899987764 33444443322 23677774111122455544 355676654
No 158
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=94.12 E-value=0.083 Score=54.22 Aligned_cols=103 Identities=16% Similarity=0.171 Sum_probs=68.8
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFD 355 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~ 355 (535)
++.|+||.|.|||++|+.+|+.+...|++|++ ||+.. - +. . .+. +....+- ++| .
T Consensus 138 ~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~--------~d~~~--~--~~---~-~~~-------~~~~~~l~ell-~ 193 (334)
T 3kb6_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLC--------YDVVK--R--ED---L-KEK-------GCVYTSLDELL-K 193 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE--------ECSSC--C--HH---H-HHT-------TCEECCHHHHH-H
T ss_pred eecCcEEEEECcchHHHHHHHhhcccCceeee--------cCCcc--c--hh---h-hhc-------CceecCHHHHH-h
Confidence 57899999999999999999999999999998 44443 1 11 1 111 1222222 454 4
Q ss_pred cceEEeeccc-----ccccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCc
Q psy1913 356 KVDILVPAAI-----EKVIRKSNADKVQ-AKIIVEAANGPL-TPA-AHAMLLKKNV 403 (535)
Q Consensus 356 ~~DILiPaA~-----~~~It~~na~~i~-AkiIvEgAN~p~-T~e-A~~iL~~rGI 403 (535)
.|||++-+.. .+.|+.+....++ --+++--|=|++ ..+ ..+.|.+.-|
T Consensus 194 ~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i 249 (334)
T 3kb6_A 194 ESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKF 249 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCE
T ss_pred hCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCc
Confidence 7899988765 3456666666665 368889999994 433 3355655544
No 159
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=94.05 E-value=0.069 Score=54.35 Aligned_cols=108 Identities=14% Similarity=0.169 Sum_probs=69.0
Q ss_pred CcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-c
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-D 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~ 355 (535)
-.+|+|+|+|++|...++.|.+. ++++++|+| .+.+...+..++.|- . +.....+. +++. .
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d------------~~~~~~~~~a~~~~~-~--~~~~~~~~~~~ll~~~ 70 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVAS------------RSLEKAKAFATANNY-P--ESTKIHGSYESLLEDP 70 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEEC------------SSHHHHHHHHHHTTC-C--TTCEEESSHHHHHHCT
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEc------------CCHHHHHHHHHHhCC-C--CCCeeeCCHHHHhcCC
Confidence 36999999999999989888874 789999876 445666666665541 0 11233344 5664 4
Q ss_pred cceEEeeccccccccccccccc-c--ceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 356 KVDILVPAAIEKVIRKSNADKV-Q--AKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~i-~--AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
++|+++-|+. +..+.+.+... + ..++||= |+ | .+++++ .+++|+.+.
T Consensus 71 ~~D~V~i~tp-~~~h~~~~~~al~aGk~V~~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 71 EIDALYVPLP-TSLHVEWAIKAAEKGKHILLEK---PVAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp TCCEEEECCC-GGGHHHHHHHHHTTTCEEEECS---SCSSSHHHHHHHHHHHHTTTCCEE
T ss_pred CCCEEEEcCC-hHHHHHHHHHHHHCCCeEEEec---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 7999998885 44455444332 2 3577763 52 3 345544 456787654
No 160
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=94.01 E-value=0.11 Score=52.28 Aligned_cols=48 Identities=17% Similarity=0.097 Sum_probs=40.6
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcccc-HHHHHHHHHHHCCCeEEE
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGN-VGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGn-VG~~~A~~L~e~GakVVa 308 (535)
-.+.|.+|+...++ ..+ ++|++++|.|.|+ ||..+|++|...|+.|+.
T Consensus 131 ~~PcTp~gv~~lL~----------~~~----l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv 179 (276)
T 3ngx_A 131 LVPATPRAVIDIMD----------YYG----YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSV 179 (276)
T ss_dssp SCCHHHHHHHHHHH----------HHT----CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCcHHHHHHHHH----------HhC----cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEE
Confidence 36889999987766 234 6899999999986 899999999999999764
No 161
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.96 E-value=0.12 Score=50.53 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=61.5
Q ss_pred cEEEEEccccHHHHHHHHHHHCCC--eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcccc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRA--KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDK 356 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~ 356 (535)
++|+|.|+|++|..+|+.|.+.|. +|++ .|.+.+.+.... +.|... ...+. +.+..+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-------------~d~~~~~~~~~~-~~g~~~-----~~~~~~~~~~~~~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-------------YDINPESISKAV-DLGIID-----EGTTSIAKVEDFS 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE-------------ECSCHHHHHHHH-HTTSCS-----EEESCGGGGGGTC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE-------------EeCCHHHHHHHH-HCCCcc-----cccCCHHHHhcCC
Confidence 489999999999999999999998 7776 345556655443 333210 11122 333218
Q ss_pred ceEEeecccccccccccccc----cc-ceEEEecCCCCCC--HHHHHHHHh
Q psy1913 357 VDILVPAAIEKVIRKSNADK----VQ-AKIIVEAANGPLT--PAAHAMLLK 400 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~----i~-AkiIvEgAN~p~T--~eA~~iL~~ 400 (535)
||+++-|.....+. +-+.. ++ -.+|+..+|.... ....+.|.+
T Consensus 63 aDvVilavp~~~~~-~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~ 112 (281)
T 2g5c_A 63 PDFVMLSSPVRTFR-EIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK 112 (281)
T ss_dssp CSEEEECSCHHHHH-HHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred CCEEEEcCCHHHHH-HHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc
Confidence 99999998765432 22222 32 3588888887642 233455544
No 162
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=93.93 E-value=0.4 Score=49.33 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=28.7
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
.+|+|.|||-+|+.+.+.|.++...||+|.|.
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~evvaind~ 32 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGVEVALINDL 32 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCEEEEEecC
Confidence 37999999999999999998778999999873
No 163
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.89 E-value=0.17 Score=54.14 Aligned_cols=112 Identities=16% Similarity=0.186 Sum_probs=65.6
Q ss_pred CCcEEEEEccccHHHHHHHHHHH----------CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRR----------GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA 348 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e----------~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i 348 (535)
+-.+|+|.|+|+||+.+++.|.+ .+.+|++|+|++ .+...... ++....
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~------------~~~~~~~~---------~~~~~~ 67 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRN------------LDKAEALA---------GGLPLT 67 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSC------------HHHHHHHH---------TTCCEE
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECC------------HHHhhhhc---------ccCccc
Confidence 45799999999999999988864 467999998753 23222221 112223
Q ss_pred CC--CCcc-ccceEEeeccccccccccccc-ccc--ceEEEecCCCCC-CHHHH---HHHHhCCceeeccccccccC
Q psy1913 349 PT--DIMF-DKVDILVPAAIEKVIRKSNAD-KVQ--AKIIVEAANGPL-TPAAH---AMLLKKNVLIIPDIFANAGG 415 (535)
Q Consensus 349 ~~--ell~-~~~DILiPaA~~~~It~~na~-~i~--AkiIvEgAN~p~-T~eA~---~iL~~rGI~viPD~laNaGG 415 (535)
++ +++. .++|+++-|......+.+.+. -++ ..+|+| |-.. ..++. +..+++|+.+. |-++.||
T Consensus 68 ~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvte--nkal~a~~~~eL~~~A~~~gv~l~--~Ea~V~~ 140 (444)
T 3mtj_A 68 TNPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTA--NKHLVAKYGNEIFAAAQAKGVMVT--FEAAVAG 140 (444)
T ss_dssp SCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEE--CGGGSST
T ss_pred CCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEEC--CcccCHHHHHHHHHHHHHhCCeEE--EEEeeeC
Confidence 33 5664 579999999875444444432 222 245554 2222 22333 33467788764 3444443
No 164
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.89 E-value=0.069 Score=47.66 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=30.3
Q ss_pred CCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 275 EPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 275 ~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
+..+.+.+|+|.|+|.+|+.+++.|.+.|++|+++.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid 49 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVD 49 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 445678999999999999999999999999988753
No 165
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=93.86 E-value=0.059 Score=55.11 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=54.8
Q ss_pred CCcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF- 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~- 354 (535)
+..+|+|+|+|++|...++.|.+. +++|++|+| .|.+.+. ..++.| ...+++ +++.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d------------~~~~~~~-~a~~~g-------~~~~~~~~~ll~~ 63 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFD------------ILAEKRE-AAAQKG-------LKIYESYEAVLAD 63 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC------------SSHHHHH-HHHTTT-------CCBCSCHHHHHHC
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEc------------CCHHHHH-HHHhcC-------CceeCCHHHHhcC
Confidence 457999999999999999988876 889999876 4445543 223322 223344 5664
Q ss_pred ccceEEeeccccccccccccccc---cceEEEec
Q psy1913 355 DKVDILVPAAIEKVIRKSNADKV---QAKIIVEA 385 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~i---~AkiIvEg 385 (535)
.++|+++-|+.. ..+.+.+... ...++||=
T Consensus 64 ~~~D~V~i~tp~-~~h~~~~~~al~aGkhVl~EK 96 (359)
T 3e18_A 64 EKVDAVLIATPN-DSHKELAISALEAGKHVVCEK 96 (359)
T ss_dssp TTCCEEEECSCG-GGHHHHHHHHHHTTCEEEEES
T ss_pred CCCCEEEEcCCc-HHHHHHHHHHHHCCCCEEeeC
Confidence 578999877753 3344333222 23577773
No 166
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.81 E-value=0.082 Score=51.97 Aligned_cols=86 Identities=21% Similarity=0.286 Sum_probs=58.4
Q ss_pred cEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccce
Q psy1913 281 KTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~D 358 (535)
++|+|.|+ |++|..+|+.|.+.|..|++ .|.+.+.+.+..+ .| + ...+. +.+ .+||
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~-------------~~r~~~~~~~~~~-~g-~------~~~~~~~~~-~~aD 69 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAA-------------IEIAPEGRDRLQG-MG-I------PLTDGDGWI-DEAD 69 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEE-------------ECCSHHHHHHHHH-TT-C------CCCCSSGGG-GTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEE-------------EECCHHHHHHHHh-cC-C------CcCCHHHHh-cCCC
Confidence 58999999 99999999999999998886 3355566655543 22 1 11122 333 4899
Q ss_pred EEeeccccccccccccccc----c-ceEEEecCCCC
Q psy1913 359 ILVPAAIEKVIRKSNADKV----Q-AKIIVEAANGP 389 (535)
Q Consensus 359 ILiPaA~~~~It~~na~~i----~-AkiIvEgAN~p 389 (535)
++|-|.....+ .+-+..+ + -++|+..+++.
T Consensus 70 vVi~av~~~~~-~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 70 VVVLALPDNII-EKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp EEEECSCHHHH-HHHHHHHGGGSCTTCEEEESCSHH
T ss_pred EEEEcCCchHH-HHHHHHHHHhCCCCCEEEECCCCc
Confidence 99999886653 3333333 2 36888877775
No 167
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=93.77 E-value=0.077 Score=53.13 Aligned_cols=104 Identities=14% Similarity=0.130 Sum_probs=64.8
Q ss_pred cEEEEEccccHHH-HHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccc
Q psy1913 281 KTYIVQGFGNVGF-HAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKV 357 (535)
Q Consensus 281 ~~VaIQGfGnVG~-~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~ 357 (535)
.+|+|+|+|++|. ..++.|.+. +++|+ |+| .|.+.+.+..++.|.- . ...+. +.+..++
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d------------~~~~~~~~~a~~~g~~-~----~~~~~~~~l~~~~ 64 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCT------------RNPKVLGTLATRYRVS-A----TCTDYRDVLQYGV 64 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EEC------------SCHHHHHHHHHHTTCC-C----CCSSTTGGGGGCC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEe------------CCHHHHHHHHHHcCCC-c----cccCHHHHhhcCC
Confidence 5899999999998 478888764 78888 654 5667777776665421 0 01223 4446689
Q ss_pred eEEeecccccccccccc-ccccc--eEEEecCCCCC--C-HHHHH---HHHhCCceee
Q psy1913 358 DILVPAAIEKVIRKSNA-DKVQA--KIIVEAANGPL--T-PAAHA---MLLKKNVLII 406 (535)
Q Consensus 358 DILiPaA~~~~It~~na-~~i~A--kiIvEgAN~p~--T-~eA~~---iL~~rGI~vi 406 (535)
|+++-|.... .+.+.+ .-+++ .+++|- |+ | .++.+ ..+++|+.+.
T Consensus 65 D~V~i~tp~~-~h~~~~~~al~~Gk~V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~ 118 (323)
T 1xea_A 65 DAVMIHAATD-VHSTLAAFFLHLGIPTFVDK---PLAASAQECENLYELAEKHHQPLY 118 (323)
T ss_dssp SEEEECSCGG-GHHHHHHHHHHTTCCEEEES---CSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEECCch-hHHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHhcCCeEE
Confidence 9999998643 344444 23333 477873 42 3 34443 3456787654
No 168
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.77 E-value=0.22 Score=50.17 Aligned_cols=105 Identities=11% Similarity=0.141 Sum_probs=64.6
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCC----CcccCC-CCcc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPG----TKSAPT-DIMF 354 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~----a~~i~~-ell~ 354 (535)
..+|+|.|.|++|..+|..|.+.|..|+. .+-+.+.+..+.+....+ ..++ ....+. +- .
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~-------------~~r~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~-~ 78 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVIL-------------WARRKEIVDLINVSHTSP-YVEESKITVRATNDLEE-I 78 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSSHHHHHHHHHHSCBT-TBTTCCCCSEEESCGGG-C
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEE-------------EeCCHHHHHHHHHhCCcc-cCCCCeeeEEEeCCHHH-h
Confidence 46999999999999999999999998876 224455665555443222 1121 222222 22 3
Q ss_pred ccceEEeeccccccccccccccc--cceEEEecCCCCC---CHHHHHHHHh
Q psy1913 355 DKVDILVPAAIEKVIRKSNADKV--QAKIIVEAANGPL---TPAAHAMLLK 400 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~i--~AkiIvEgAN~p~---T~eA~~iL~~ 400 (535)
.+||++|-|.... ...+-+..+ .-++|+.-+|+-. .....+++.+
T Consensus 79 ~~aDvVil~vk~~-~~~~v~~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~~ 128 (335)
T 1z82_A 79 KKEDILVIAIPVQ-YIREHLLRLPVKPSMVLNLSKGIEIKTGKRVSEIVEE 128 (335)
T ss_dssp CTTEEEEECSCGG-GHHHHHTTCSSCCSEEEECCCCCCTTTCCCHHHHHHH
T ss_pred cCCCEEEEECCHH-HHHHHHHHhCcCCCEEEEEeCCCCCCccCcHHHHHHH
Confidence 4899999987643 333333334 3578999999732 2334445544
No 169
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.76 E-value=0.082 Score=52.23 Aligned_cols=41 Identities=24% Similarity=0.114 Sum_probs=34.4
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~ 334 (535)
++|+|.|.|++|..+|..|++.|+.|+. .|.+.+.+.+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l-------------~d~~~~~~~~~~~ 45 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTA-------------YDINTDALDAAKK 45 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEE-------------EeCCHHHHHHHHH
Confidence 6899999999999999999999999987 5566666655543
No 170
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=93.72 E-value=0.22 Score=54.43 Aligned_cols=177 Identities=13% Similarity=0.122 Sum_probs=119.0
Q ss_pred CCCHHHHHHHHHHHHHHHhccCccCCCCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCc
Q psy1913 171 KYNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESA 250 (535)
Q Consensus 171 ~~s~~Eler~~r~f~~~L~~~~~iGp~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~a 250 (535)
..+-.|.+.+...|+.++.+ ..||..-|-=.|++.. .---|.+.|+.. .-|+-.+ -.-
T Consensus 203 Rv~g~eyd~fvdefv~av~~--~fGp~~~I~~EDf~~~--~af~il~ryr~~--------ipvFnDD----------iqG 260 (555)
T 1gq2_A 203 RIRGQAYDDLLDEFMEAVTS--RYGMNCLIQFEDFANA--NAFRLLHKYRNK--------YCTFNDD----------IQG 260 (555)
T ss_dssp CCCTHHHHHHHHHHHHHHHH--HHCTTCEEEECSCCHH--HHHHHHHHHTTT--------SEEEETT----------THH
T ss_pred CCchHHHHHHHHHHHHHHHH--hhCCCcEEeecccCCc--cHHHHHHHHhcc--------CCEecCc----------cch
Confidence 34667888899999999976 6888887878888743 233456777541 1223221 233
Q ss_pred hHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHH----CCC------eEEEEecCCceEeCCC
Q psy1913 251 TGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRR----GRA------KCLAIVEHDTAIVPDK 320 (535)
Q Consensus 251 Tg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e----~Ga------kVVaVsD~~G~iynp~ 320 (535)
||-=+..++.+++ +..|. .|+..||++.|.|..|..+|++|.. .|. +=+-+.|++|-|+...
T Consensus 261 Ta~V~lAgllnAl------ki~gk--~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r 332 (555)
T 1gq2_A 261 TASVAVAGLLAAL------RITKN--RLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGR 332 (555)
T ss_dssp HHHHHHHHHHHHH------HHHTS--CGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTC
T ss_pred HHHHHHHHHHHHH------HHhCC--ChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCC
Confidence 4444444555443 45664 4899999999999999999999987 684 4566799999999854
Q ss_pred CCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc-cccceEEeeccc-ccccccccccccc----ceEEEecCCC
Q psy1913 321 GTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM-FDKVDILVPAAI-EKVIRKSNADKVQ----AKIIVEAANG 388 (535)
Q Consensus 321 G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell-~~~~DILiPaA~-~~~It~~na~~i~----AkiIvEgAN~ 388 (535)
. ||+.. +...-.- ...... +.+ .+++||||=++. ++++|++-+..+. -.||---||-
T Consensus 333 ~-~l~~~-----k~~~A~~-----~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 397 (555)
T 1gq2_A 333 A-SLTPE-----KEHFAHE-----HCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNP 397 (555)
T ss_dssp S-SCCTT-----GGGGCBS-----CCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred C-CchHH-----HHHHHhh-----cCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 2 25532 2221000 001122 333 357999999996 8999999998884 5899999983
No 171
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=93.68 E-value=0.1 Score=51.93 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=49.4
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKV 357 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~ 357 (535)
-+||++.|||++|+.+++. . +..+++|.| +..| +| +....++ +++. ++
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~------~k~g-el-------------------gv~a~~d~d~lla-~p 61 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD------RISK-DI-------------------PGVVRLDEFQVPS-DV 61 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC------SSCC-CC-------------------SSSEECSSCCCCT-TC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe------cccc-cc-------------------CceeeCCHHHHhh-CC
Confidence 5799999999999999998 4 999999876 2222 12 2222333 6776 99
Q ss_pred eEEeeccccccccccccccccc
Q psy1913 358 DILVPAAIEKVIRKSNADKVQA 379 (535)
Q Consensus 358 DILiPaA~~~~It~~na~~i~A 379 (535)
|+++.||....+.+.-..-+++
T Consensus 62 D~VVe~A~~~av~e~~~~iL~a 83 (253)
T 1j5p_A 62 STVVECASPEAVKEYSLQILKN 83 (253)
T ss_dssp CEEEECSCHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHHC
Confidence 9999999776665543444444
No 172
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=93.65 E-value=0.077 Score=55.88 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=66.0
Q ss_pred CCCcEEEEEccccHHH-HHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc
Q psy1913 278 MENKTYIVQGFGNVGF-HAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM 353 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~-~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell 353 (535)
.+-.+|+|+|+|++|+ ..++.|.+. +++||+|+| .|.+.+.+..++.|.-. .+...++. +++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d------------~~~~~~~~~a~~~g~~~--~~~~~~~~~~~ll 146 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVS------------GNAEKAKIVAAEYGVDP--RKIYDYSNFDKIA 146 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEEC------------SCHHHHHHHHHHTTCCG--GGEECSSSGGGGG
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEc------------CCHHHHHHHHHHhCCCc--ccccccCCHHHHh
Confidence 3457999999999997 778887764 789999876 45566666666654210 00011233 566
Q ss_pred c-ccceEEeecccccccccccccc-ccc--eEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 354 F-DKVDILVPAAIEKVIRKSNADK-VQA--KIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 354 ~-~~~DILiPaA~~~~It~~na~~-i~A--kiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
. .++|+++-|.... .+.+.+.. +++ .++||= |+ | .+++++ .+++|+.+.
T Consensus 147 ~~~~vD~V~iatp~~-~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~ 205 (433)
T 1h6d_A 147 KDPKIDAVYIILPNS-LHAEFAIRAFKAGKHVMCEK---PMATSVADCQRMIDAAKAANKKLM 205 (433)
T ss_dssp GCTTCCEEEECSCGG-GHHHHHHHHHHTTCEEEECS---SCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred cCCCCCEEEEcCCch-hHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHhCCeEE
Confidence 4 4799999987543 34443332 222 477773 42 2 344443 345666553
No 173
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=93.61 E-value=0.12 Score=52.05 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=48.8
Q ss_pred cEEEEEccccHHHHHHHHHH-H-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-c
Q psy1913 281 KTYIVQGFGNVGFHAARYFR-R-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-D 355 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~-e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~ 355 (535)
.+|+|+|+|++|...++.|. + .+++|++|+| .|.+.+.+..++.|- .....+. +++. .
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d------------~~~~~~~~~~~~~g~-----~~~~~~~~~~ll~~~ 65 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTD------------VNQEAAQKVVEQYQL-----NATVYPNDDSLLADE 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEEC------------SSHHHHHHHHHHTTC-----CCEEESSHHHHHHCT
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEc------------CCHHHHHHHHHHhCC-----CCeeeCCHHHHhcCC
Confidence 58999999999999999888 5 5899999875 556677776666541 1223333 5554 4
Q ss_pred cceEEeeccc
Q psy1913 356 KVDILVPAAI 365 (535)
Q Consensus 356 ~~DILiPaA~ 365 (535)
++|+++-|..
T Consensus 66 ~~D~V~i~tp 75 (344)
T 3mz0_A 66 NVDAVLVTSW 75 (344)
T ss_dssp TCCEEEECSC
T ss_pred CCCEEEECCC
Confidence 6888888774
No 174
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=93.59 E-value=0.21 Score=55.08 Aligned_cols=175 Identities=11% Similarity=0.184 Sum_probs=118.4
Q ss_pred CCHHHHHHHHHHHHHHHhccCccCCCCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCch
Q psy1913 172 YNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESAT 251 (535)
Q Consensus 172 ~s~~Eler~~r~f~~~L~~~~~iGp~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aT 251 (535)
.+-.|...+...|+.++.+ .+||..-|-=.|++.. .---|.+.|+.. .-|+-.+ -.-|
T Consensus 242 v~g~~Yd~fvdefv~av~~--~fGp~~~I~~EDf~~p--~af~il~ryr~~--------ipvFnDD----------iqGT 299 (605)
T 1o0s_A 242 VRGKDYDTLLDNFMKACTK--KYGQKTLIQFEDFANP--NAFRLLDKYQDK--------YTMFNDD----------IQGT 299 (605)
T ss_dssp CCSHHHHHHHHHHHHHHHH--HHCTTCEEEECSCCHH--HHHHHHHHHTTT--------SEEEEHH----------HHHH
T ss_pred CChHHHHHHHHHHHHHHHH--HhCCCcEeeHhhcCCc--cHHHHHHHhccC--------CCeeCcc----------cchH
Confidence 4567788899999999886 6888887878888743 233456777541 1233222 1234
Q ss_pred HHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHH----CCC------eEEEEecCCceEeCCCC
Q psy1913 252 GRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRR----GRA------KCLAIVEHDTAIVPDKG 321 (535)
Q Consensus 252 g~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e----~Ga------kVVaVsD~~G~iynp~G 321 (535)
|-=+..++.++ ++..|. .|+..||+|.|.|..|..+|++|.. .|. +=+-+.|++|-|+....
T Consensus 300 A~V~lAgllnA------lki~gk--~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~ 371 (605)
T 1o0s_A 300 ASVIVAGLLTC------TRVTKK--LVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRK 371 (605)
T ss_dssp HHHHHHHHHHH------HHHHCC--CGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCS
T ss_pred HHHHHHHHHHH------HHHhCC--ChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCC
Confidence 44444455533 345674 4899999999999999999999987 785 55667999999997542
Q ss_pred CCCCHHHHHHHHHHcCCcccCCCCc-ccCC--CCc-cccceEEeeccc-ccccccccccccc----ceEEEecCCC
Q psy1913 322 TEINYKDLHTYKITKGTIKGYPGTK-SAPT--DIM-FDKVDILVPAAI-EKVIRKSNADKVQ----AKIIVEAANG 388 (535)
Q Consensus 322 ~dLDi~~L~~~~~~~g~v~~~~~a~-~i~~--ell-~~~~DILiPaA~-~~~It~~na~~i~----AkiIvEgAN~ 388 (535)
||+.. +.. |.... .... +.+ .+++||||=++. ++++|++-+..+. -.||---||-
T Consensus 372 -~l~~~-----k~~------~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 435 (605)
T 1o0s_A 372 -EMNPR-----HVQ------FAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNP 435 (605)
T ss_dssp -SCCGG-----GTT------TCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred -CchHH-----HHH------HHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 35532 211 11100 1122 333 357999999996 8999999998884 5899999983
No 175
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.59 E-value=0.15 Score=51.47 Aligned_cols=72 Identities=17% Similarity=0.200 Sum_probs=51.1
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCccc-CCCCcccCC-CCccccc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKG-YPGTKSAPT-DIMFDKV 357 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~-~~~a~~i~~-ell~~~~ 357 (535)
-++|+|.|.|..|..+|..|+ .|..|+. .|.+.+.+.+..+.. ... ..+.+..+. +- -.+|
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v-------------~d~~~~~~~~~~~~l--~~~~~~~i~~~~~~~~-~~~a 74 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVL-------------QDVSEKALEAAREQI--PEELLSKIEFTTTLEK-VKDC 74 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEE-------------ECSCHHHHHHHHHHS--CGGGGGGEEEESSCTT-GGGC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEE-------------EECCHHHHHHHHHHH--HHHHhCCeEEeCCHHH-HcCC
Confidence 589999999999999999999 9999988 567778887776651 000 001111222 22 3589
Q ss_pred eEEeecccccc
Q psy1913 358 DILVPAAIEKV 368 (535)
Q Consensus 358 DILiPaA~~~~ 368 (535)
|++|.|..++.
T Consensus 75 DlVieavpe~~ 85 (293)
T 1zej_A 75 DIVMEAVFEDL 85 (293)
T ss_dssp SEEEECCCSCH
T ss_pred CEEEEcCcCCH
Confidence 99999988765
No 176
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.55 E-value=0.12 Score=50.45 Aligned_cols=107 Identities=9% Similarity=0.082 Sum_probs=64.3
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCC-----CcccCC-CCcc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPG-----TKSAPT-DIMF 354 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~-----a~~i~~-ell~ 354 (535)
++|+|.|.|++|..+|..|.+.|..|+. .|.+.+.+.+..+..-.+...++ ....+. ++..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~-------------~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 70 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTL-------------IDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDH 70 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCT
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEE-------------EECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcc
Confidence 5899999999999999999999998877 33555666555544211111111 011122 3332
Q ss_pred --ccceEEeeccccccccccccc----ccc-ceEEEecCCCCCC-HHHHHHHHhC
Q psy1913 355 --DKVDILVPAAIEKVIRKSNAD----KVQ-AKIIVEAANGPLT-PAAHAMLLKK 401 (535)
Q Consensus 355 --~~~DILiPaA~~~~It~~na~----~i~-AkiIvEgAN~p~T-~eA~~iL~~r 401 (535)
.+||++|-|.....+ .+-+. .++ -++|+.-.|+..+ ....+.|.+.
T Consensus 71 ~~~~~d~vi~~v~~~~~-~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 71 QNEQVDLIIALTKAQQL-DAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKE 124 (316)
T ss_dssp TSCCCSEEEECSCHHHH-HHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCGG
T ss_pred cCCCCCEEEEEeccccH-HHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCCc
Confidence 289999999876543 22222 232 3688888887654 3344444443
No 177
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=93.53 E-value=0.12 Score=52.12 Aligned_cols=111 Identities=12% Similarity=0.103 Sum_probs=68.0
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHC--------CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccC
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRG--------RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAP 349 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~--------GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~ 349 (535)
|+..||+|+|+|.+|..-++.|.+. +++|+||+| .|.+.+.+..++.|. ....+
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d------------~~~~~a~~~a~~~g~------~~~~~ 65 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCG------------RDAEAVRAAAGKLGW------STTET 65 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEEC------------SSHHHHHHHHHHHTC------SEEES
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEc------------CCHHHHHHHHHHcCC------CcccC
Confidence 5567999999999998777766542 458999875 667778777777652 22334
Q ss_pred C--CCcc-ccceEEeecccccccccccccc-cc--ceEEEecCCCCCCHHHHHH---HH---hCCceeec
Q psy1913 350 T--DIMF-DKVDILVPAAIEKVIRKSNADK-VQ--AKIIVEAANGPLTPAAHAM---LL---KKNVLIIP 407 (535)
Q Consensus 350 ~--ell~-~~~DILiPaA~~~~It~~na~~-i~--AkiIvEgAN~p~T~eA~~i---L~---~rGI~viP 407 (535)
+ +++. .++|+++=|+. +..+.+-+.. ++ ..++||=-=..+..||+++ .+ ++|+.+..
T Consensus 66 d~~~ll~~~~iDaV~I~tP-~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v 134 (390)
T 4h3v_A 66 DWRTLLERDDVQLVDVCTP-GDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMV 134 (390)
T ss_dssp CHHHHTTCTTCSEEEECSC-GGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHhcCCCCCEEEEeCC-hHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEE
Confidence 4 5664 47888887764 3344443322 22 3677774222223566665 22 25665543
No 178
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=93.52 E-value=0.033 Score=57.74 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=69.0
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDK 356 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~ 356 (535)
.+++|.|.|.|.+|+.+|+.|.+. ..|+. +| -+.+.+.+..+..+.+. . .....+. +++ .+
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V-~~------------R~~~~a~~la~~~~~~~-~-d~~~~~~l~~ll-~~ 77 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-FDVYI-GD------------VNNENLEKVKEFATPLK-V-DASNFDKLVEVM-KE 77 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-SEEEE-EE------------SCHHHHHHHTTTSEEEE-C-CTTCHHHHHHHH-TT
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-CeEEE-EE------------CCHHHHHHHHhhCCeEE-E-ecCCHHHHHHHH-hC
Confidence 578999999999999999999988 66554 43 56676666543321010 0 0000011 223 37
Q ss_pred ceEEeecccccccccccccc-ccc-eEEEecCCCC-CCHHHHHHHHhCCceeeccccccc
Q psy1913 357 VDILVPAAIEKVIRKSNADK-VQA-KIIVEAANGP-LTPAAHAMLLKKNVLIIPDIFANA 413 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~-i~A-kiIvEgAN~p-~T~eA~~iL~~rGI~viPD~laNa 413 (535)
||++|-|+... .+..-+.. +++ +.++.-+..| -+.+..+..+++|+.++|..=...
T Consensus 78 ~DvVIn~~P~~-~~~~v~~a~l~~G~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~g~G~dP 136 (365)
T 2z2v_A 78 FELVIGALPGF-LGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAP 136 (365)
T ss_dssp CSCEEECCCHH-HHHHHHHHHHHTTCCEEECCCCSSCGGGGHHHHHHTTCEEECSCBTTT
T ss_pred CCEEEECCChh-hhHHHHHHHHHhCCeEEEccCCcHHHHHHHHHHHHcCCEEEECCCCcc
Confidence 99999986533 23221111 221 4556666654 344567778899999987654333
No 179
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=93.47 E-value=0.32 Score=43.47 Aligned_cols=110 Identities=18% Similarity=0.122 Sum_probs=64.4
Q ss_pred CCCcEEEEEcc----ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--C
Q psy1913 278 MENKTYIVQGF----GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--D 351 (535)
Q Consensus 278 l~g~~VaIQGf----GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--e 351 (535)
++-++|+|+|. |++|+.+++.|.+.|++|+. +||++. .+. |...++. +
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~--------vnp~~~---------------~i~---G~~~~~s~~e 65 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLP--------VNPNYD---------------EIE---GLKCYRSVRE 65 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEE--------ECTTCS---------------EET---TEECBSSGGG
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEE--------eCCCCC---------------eEC---CeeecCCHHH
Confidence 35689999999 99999999999999998666 344430 011 2222222 3
Q ss_pred CccccceEEeeccccccccccccc---cccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchh
Q psy1913 352 IMFDKVDILVPAAIEKVIRKSNAD---KVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVS 419 (535)
Q Consensus 352 ll~~~~DILiPaA~~~~It~~na~---~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivS 419 (535)
+. .++|+.+-|... ....+-+. ...++.|+.-. +-.+.+..++.+++|+.++ =-|+=|++..
T Consensus 66 l~-~~vDlvii~vp~-~~v~~v~~~~~~~g~~~i~~~~-~~~~~~l~~~a~~~Gi~~i---gpnc~g~~~~ 130 (138)
T 1y81_A 66 LP-KDVDVIVFVVPP-KVGLQVAKEAVEAGFKKLWFQP-GAESEEIRRFLEKAGVEYS---FGRCIMVETS 130 (138)
T ss_dssp SC-TTCCEEEECSCH-HHHHHHHHHHHHTTCCEEEECT-TSCCHHHHHHHHHHTCEEE---CSCCHHHHC-
T ss_pred hC-CCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcC-ccHHHHHHHHHHHCCCEEE---cCCcceEEcc
Confidence 33 367877776552 22222221 12233333322 1247888888999999876 2355566554
No 180
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.47 E-value=0.072 Score=54.75 Aligned_cols=63 Identities=17% Similarity=0.162 Sum_probs=45.9
Q ss_pred cEEEEEccccHHHHHHHHHHHC---------CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG---------RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT- 350 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~---------GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~- 350 (535)
.+|+|.|+|+||+.+++.|.+. +.+|++|+|++ ...+.+ ++. ....++
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~~~--~~~------------------~~~~~d~ 61 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKPRA--IPQ------------------ELLRAEP 61 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSCCS--SCG------------------GGEESSC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHhhc--cCc------------------ccccCCH
Confidence 5899999999999999999875 57999999986 223344 421 112223
Q ss_pred -CCccccceEEeeccccc
Q psy1913 351 -DIMFDKVDILVPAAIEK 367 (535)
Q Consensus 351 -ell~~~~DILiPaA~~~ 367 (535)
+++ ++||++.|+...
T Consensus 62 ~~ll--~iDvVve~t~~~ 77 (332)
T 2ejw_A 62 FDLL--EADLVVEAMGGV 77 (332)
T ss_dssp CCCT--TCSEEEECCCCS
T ss_pred HHHh--CCCEEEECCCCc
Confidence 566 999999997544
No 181
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.47 E-value=0.055 Score=55.28 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=29.2
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecCC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHD 313 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~ 313 (535)
.+|+|.|||.+|+.+++.|.+. +.+|++|+|.+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~ 36 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK 36 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC
Confidence 4899999999999999999875 68999999863
No 182
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=93.46 E-value=0.11 Score=53.08 Aligned_cols=72 Identities=13% Similarity=0.100 Sum_probs=47.8
Q ss_pred CCCCcEEEEEccccHHHHHHHHHH-H-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CC
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFR-R-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DI 352 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~-e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--el 352 (535)
.++..+|+|+|+|++|...++.|. + .+++|++|+|. |.+.+.+..++.|- ....++. ++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~------------~~~~~~~~a~~~g~-----~~~~~~~~~~l 82 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI------------VAGRAQAALDKYAI-----EAKDYNDYHDL 82 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS------------STTHHHHHHHHHTC-----CCEEESSHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC------------CHHHHHHHHHHhCC-----CCeeeCCHHHH
Confidence 355679999999999999999888 4 58999998764 33455555555541 1222333 55
Q ss_pred cc-ccceEEeeccc
Q psy1913 353 MF-DKVDILVPAAI 365 (535)
Q Consensus 353 l~-~~~DILiPaA~ 365 (535)
+. .++|+++-|+.
T Consensus 83 l~~~~~D~V~i~tp 96 (357)
T 3ec7_A 83 INDKDVEVVIITAS 96 (357)
T ss_dssp HHCTTCCEEEECSC
T ss_pred hcCCCCCEEEEcCC
Confidence 54 36788887764
No 183
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.43 E-value=0.058 Score=54.15 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=32.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEec
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD 311 (535)
+++|++|.|.|.|.||...++.|.+.|++|+.|+.
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 47899999999999999999999999999998774
No 184
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=93.41 E-value=0.44 Score=49.43 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=28.8
Q ss_pred CcEEEEEccccHHHHHHHHHHHC-CCeEEEEec
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVE 311 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD 311 (535)
-.+|+|.|||-+|+.+.|.|.+. ...||+|.|
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivaind 49 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAIND 49 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEEC
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 35999999999999999999886 789999987
No 185
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.34 E-value=0.11 Score=48.85 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=29.2
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
.++|++|.|.|. |.+|+++++.|++.|++|++++
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~ 52 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMV 52 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEE
Confidence 578999999997 9999999999999999999865
No 186
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.30 E-value=0.075 Score=54.72 Aligned_cols=104 Identities=12% Similarity=0.111 Sum_probs=63.5
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc---
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF--- 354 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~--- 354 (535)
-++|.|+|+|++|..+|+.|.+.|..|++ .|.+.+.+....+ .| ....+. +++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~-------------~dr~~~~~~~a~~-~G-------~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFG-------------YNRSRSGAKSAVD-EG-------FDVSADLEATLQRAA 66 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSCHHHHHHHHH-TT-------CCEESCHHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHH-cC-------CeeeCCHHHHHHhcc
Confidence 46899999999999999999999999988 5567776665443 32 222222 3443
Q ss_pred ccceEEeecccccccccccccccc----ceEEEecCCCCCCHHHHHHHHhC--Cceeec
Q psy1913 355 DKVDILVPAAIEKVIRKSNADKVQ----AKIIVEAANGPLTPAAHAMLLKK--NVLIIP 407 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~i~----AkiIvEgAN~p~T~eA~~iL~~r--GI~viP 407 (535)
.+||++|-|.....+ .+-...+. -.+|+..+. +....-+.+.+. ++.++|
T Consensus 67 ~~aDlVilavP~~~~-~~vl~~l~~~~~~~iv~Dv~S--vk~~i~~~~~~~~~~~~~v~ 122 (341)
T 3ktd_A 67 AEDALIVLAVPMTAI-DSLLDAVHTHAPNNGFTDVVS--VKTAVYDAVKARNMQHRYVG 122 (341)
T ss_dssp HTTCEEEECSCHHHH-HHHHHHHHHHCTTCCEEECCS--CSHHHHHHHHHTTCGGGEEC
T ss_pred cCCCEEEEeCCHHHH-HHHHHHHHccCCCCEEEEcCC--CChHHHHHHHHhCCCCcEec
Confidence 258999999875433 23223331 246665543 233322223332 466777
No 187
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.30 E-value=0.071 Score=52.57 Aligned_cols=109 Identities=13% Similarity=0.073 Sum_probs=63.1
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCC-eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM 353 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell 353 (535)
+++| ++.|.|.|.+|+.++..|.+.|+ +|+ |.+ -+.+++.++.++.+ ...++. +.
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~-v~n------------R~~~ka~~la~~~~-------~~~~~~~~~~- 163 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIW-VVN------------RTIERAKALDFPVK-------IFSLDQLDEV- 163 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEE-EEE------------SCHHHHHTCCSSCE-------EEEGGGHHHH-
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEE-EEe------------CCHHHHHHHHHHcc-------cCCHHHHHhh-
Confidence 3578 99999999999999999999998 554 443 33444333222111 111111 11
Q ss_pred cccceEEeecccccccc-ccc--ccccc-ceEEEecCCCCCCHHHHHHHHhCCce-eeccc
Q psy1913 354 FDKVDILVPAAIEKVIR-KSN--ADKVQ-AKIIVEAANGPLTPAAHAMLLKKNVL-IIPDI 409 (535)
Q Consensus 354 ~~~~DILiPaA~~~~It-~~n--a~~i~-AkiIvEgAN~p~T~eA~~iL~~rGI~-viPD~ 409 (535)
-.++||+|-|..-+.-. ... .+.++ ..+|++-+-+ .|+-..+. +++|+. ++|..
T Consensus 164 ~~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~Divy~-~T~ll~~A-~~~G~~~~~~Gl 222 (253)
T 3u62_A 164 VKKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF-DTPLVVKA-RKLGVKHIIKGN 222 (253)
T ss_dssp HHTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS-CCHHHHHH-HHHTCSEEECTH
T ss_pred hcCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC-CcHHHHHH-HHCCCcEEECCH
Confidence 23789999776432211 011 11232 4677887777 66665443 467877 66543
No 188
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.30 E-value=0.071 Score=50.60 Aligned_cols=88 Identities=15% Similarity=0.124 Sum_probs=54.4
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKV 357 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~ 357 (535)
..++|+|.|+|++|+.+++.|.+.|.+|+++ |-+.+.+.+..+. +....+. +.+ .+|
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~-------------~r~~~~~~~~~~~--------g~~~~~~~~~~-~~~ 84 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVG-------------SRNPKRTARLFPS--------AAQVTFQEEAV-SSP 84 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEE-------------ESSHHHHHHHSBT--------TSEEEEHHHHT-TSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHc--------CCceecHHHHH-hCC
Confidence 4578999999999999999999999988762 2444544433221 1121222 333 379
Q ss_pred eEEeeccccccccccccc---cccceEEEecCCCC
Q psy1913 358 DILVPAAIEKVIRKSNAD---KVQAKIIVEAANGP 389 (535)
Q Consensus 358 DILiPaA~~~~It~~na~---~i~AkiIvEgAN~p 389 (535)
|++|-|.....+. +-.. .+.-++|+.-+|+-
T Consensus 85 DvVi~av~~~~~~-~v~~l~~~~~~~~vv~~s~g~ 118 (215)
T 2vns_A 85 EVIFVAVFREHYS-SLCSLSDQLAGKILVDVSNPT 118 (215)
T ss_dssp SEEEECSCGGGSG-GGGGGHHHHTTCEEEECCCCC
T ss_pred CEEEECCChHHHH-HHHHHHHhcCCCEEEEeCCCc
Confidence 9999998754321 1111 11346777777765
No 189
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=93.27 E-value=0.51 Score=48.67 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=28.3
Q ss_pred cEEEEEccccHHHHHHHHHHHC---CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG---RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~---GakVVaVsD~ 312 (535)
.+|+|.|||-+|+.+.|.|.++ ...||+|.|.
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~ 36 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT 36 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC
Confidence 4899999999999999999886 4799999873
No 190
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.27 E-value=0.049 Score=56.56 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=29.2
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
++.+++|.|.|+|.+|..+++.+...|++|++
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~ 200 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMA 200 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 46799999999999999999999999999655
No 191
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.23 E-value=0.044 Score=54.89 Aligned_cols=123 Identities=13% Similarity=0.194 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHH
Q psy1913 251 TGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLH 330 (535)
Q Consensus 251 Tg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~ 330 (535)
-+.|...+++. .+. +++|+++.|.|.|.+|+.++..|.+.|++-|.|.+++- +...
T Consensus 100 D~~G~~~~L~~----------~~~--~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~------------~~a~ 155 (277)
T 3don_A 100 DGIGYVNGLKQ----------IYE--GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTM------------SRFN 155 (277)
T ss_dssp HHHHHHHHHHH----------HST--TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG------------GGGT
T ss_pred hHHHHHHHHHH----------hCC--CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH------------HHHH
Confidence 47787776662 343 46899999999999999999999999994444444431 1111
Q ss_pred HHHHHcCCcccCCCCcccCC--CCccccceEEeeccccccccc--c--cccccc-ceEEEecCCCC-CCHHHHHHHHhCC
Q psy1913 331 TYKITKGTIKGYPGTKSAPT--DIMFDKVDILVPAAIEKVIRK--S--NADKVQ-AKIIVEAANGP-LTPAAHAMLLKKN 402 (535)
Q Consensus 331 ~~~~~~g~v~~~~~a~~i~~--ell~~~~DILiPaA~~~~It~--~--na~~i~-AkiIvEgAN~p-~T~eA~~iL~~rG 402 (535)
+... .+ ....++. +. -.++||+|-|+.-+.-.. . ....++ ..+|++-.=+| .|+- -+..+++|
T Consensus 156 ~la~------~~-~~~~~~~~~~~-~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T~l-l~~A~~~G 226 (277)
T 3don_A 156 NWSL------NI-NKINLSHAESH-LDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPI-LIEAEQRG 226 (277)
T ss_dssp TCCS------CC-EEECHHHHHHT-GGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSCHH-HHHHHHTT
T ss_pred HHHH------hc-ccccHhhHHHH-hcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCCHH-HHHHHHCc
Confidence 1000 00 0001111 12 247899997765332111 1 122333 47889988667 5764 34457888
Q ss_pred ceee
Q psy1913 403 VLII 406 (535)
Q Consensus 403 I~vi 406 (535)
+.++
T Consensus 227 ~~~~ 230 (277)
T 3don_A 227 NPIY 230 (277)
T ss_dssp CCEE
T ss_pred CEEe
Confidence 7654
No 192
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.22 E-value=0.15 Score=49.66 Aligned_cols=87 Identities=13% Similarity=0.138 Sum_probs=56.7
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|+|.|+|++|..+|+.|.+.|.+|++ .|.+.+.+.... +.|.. ....+. ++ .+||
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~-------------~~~~~~~~~~~~-~~g~~-----~~~~~~~~~~--~~~D 59 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIG-------------VSRQQSTCEKAV-ERQLV-----DEAGQDLSLL--QTAK 59 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHH-HTTSC-----SEEESCGGGG--TTCS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEE-------------EECCHHHHHHHH-hCCCC-----ccccCCHHHh--CCCC
Confidence 4799999999999999999999998877 335666665544 33321 011222 34 6899
Q ss_pred EEeecccccccccccc----cccc-ceEEEecCCCC
Q psy1913 359 ILVPAAIEKVIRKSNA----DKVQ-AKIIVEAANGP 389 (535)
Q Consensus 359 ILiPaA~~~~It~~na----~~i~-AkiIvEgAN~p 389 (535)
++|-|.....+. +-+ +.++ -.+|+..+|.+
T Consensus 60 ~vi~av~~~~~~-~~~~~l~~~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 60 IIFLCTPIQLIL-PTLEKLIPHLSPTAIVTDVASVK 94 (279)
T ss_dssp EEEECSCHHHHH-HHHHHHGGGSCTTCEEEECCSCC
T ss_pred EEEEECCHHHHH-HHHHHHHhhCCCCCEEEECCCCc
Confidence 999998765322 222 2232 35777776643
No 193
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=93.19 E-value=0.58 Score=47.58 Aligned_cols=133 Identities=14% Similarity=0.163 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHH
Q psy1913 251 TGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLH 330 (535)
Q Consensus 251 Tg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~ 330 (535)
-+.|...+++ ..|. +++++++.|.|.|.+|+.++..|.+.|++-|.|++++ . =+.+...
T Consensus 131 D~~Gf~~~L~----------~~~~--~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt-------~--~~~~~a~ 189 (312)
T 3t4e_A 131 DGTGHIRAIK----------ESGF--DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK-------D--DFFEKAV 189 (312)
T ss_dssp HHHHHHHHHH----------HTTC--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS-------S--THHHHHH
T ss_pred cHHHHHHHHH----------hcCC--CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC-------C--chHHHHH
Confidence 3677766665 2344 4789999999999999999999999999544444432 0 1144454
Q ss_pred HHHHHcCCcccCCC-CcccCC-CC---c--cccceEEeeccccccc--ccc----cccccc-ceEEEecCCCC-CCHHHH
Q psy1913 331 TYKITKGTIKGYPG-TKSAPT-DI---M--FDKVDILVPAAIEKVI--RKS----NADKVQ-AKIIVEAANGP-LTPAAH 395 (535)
Q Consensus 331 ~~~~~~g~v~~~~~-a~~i~~-el---l--~~~~DILiPaA~~~~I--t~~----na~~i~-AkiIvEgAN~p-~T~eA~ 395 (535)
+..++.+.. ++. ...++. ++ - -.++||+|-|+.-+.- ... +...++ ..+|.+-.=+| -|+=..
T Consensus 190 ~la~~~~~~--~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll~ 267 (312)
T 3t4e_A 190 AFAKRVNEN--TDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQ 267 (312)
T ss_dssp HHHHHHHHH--SSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHHHH
T ss_pred HHHHHhhhc--cCcceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHHHH
Confidence 444332110 000 011111 21 1 1378999988764431 111 123343 47889999998 577544
Q ss_pred HHHHhCCceeec
Q psy1913 396 AMLLKKNVLIIP 407 (535)
Q Consensus 396 ~iL~~rGI~viP 407 (535)
. -+++|..+++
T Consensus 268 ~-A~~~G~~~~~ 278 (312)
T 3t4e_A 268 Q-AQQAGCKTID 278 (312)
T ss_dssp H-HHHTTCEEEC
T ss_pred H-HHHCCCeEEC
Confidence 4 3678876543
No 194
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.18 E-value=0.05 Score=52.42 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=61.4
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCC----CeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGR----AKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DI 352 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~G----akVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--el 352 (535)
+.++|.|.|.|++|..+++.|.+.| ..|+. .|.+ - +- . +....+. +.
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~-~~~~-------~-~~-----------~-------g~~~~~~~~~~ 55 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANANIIKKENLFY-YGPS-------K-KN-----------T-------TLNYMSSNEEL 55 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEE-ECSS-------C-CS-----------S-------SSEECSCHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEE-EeCC-------c-cc-----------C-------ceEEeCCHHHH
Confidence 4578999999999999999999988 46543 4432 1 00 1 1121222 22
Q ss_pred ccccceEEeeccccccccc---cccccccceEEEecCCCCCCHHHHHHHHh--CCceeeccccc
Q psy1913 353 MFDKVDILVPAAIEKVIRK---SNADKVQAKIIVEAANGPLTPAAHAMLLK--KNVLIIPDIFA 411 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~---~na~~i~AkiIvEgAN~p~T~eA~~iL~~--rGI~viPD~la 411 (535)
+ .+||++|-|.....+.+ +-.+.++-++|+--.|+-......+.|.+ +.+.++|....
T Consensus 56 ~-~~~D~vi~~v~~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~ 118 (262)
T 2rcy_A 56 A-RHCDIIVCAVKPDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPC 118 (262)
T ss_dssp H-HHCSEEEECSCTTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGG
T ss_pred H-hcCCEEEEEeCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHH
Confidence 2 37999999987554321 12222334567766776433444555543 23567777643
No 195
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=93.18 E-value=0.09 Score=55.38 Aligned_cols=112 Identities=9% Similarity=0.022 Sum_probs=69.3
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccC----C--
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAP----T-- 350 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~----~-- 350 (535)
++-.+|+|+|+|.+|...++.|.+. +++|++|+| .|.+.+.+..+.... .+++....++ .
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d------------~~~~~~~~~a~~~~~-~g~~~~~~~~~~~~~~~ 84 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFAD------------PDPYMVGRAQEILKK-NGKKPAKVFGNGNDDYK 84 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEC------------SCHHHHHHHHHHHHH-TTCCCCEEECSSTTTHH
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEe------------CCHHHHHHHHHHHHh-cCCCCCceeccCCCCHH
Confidence 3457999999999999888888774 889999876 455665555442100 0122233343 4
Q ss_pred CCcc-ccceEEeecccccccccccccc-cc--ceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 351 DIMF-DKVDILVPAAIEKVIRKSNADK-VQ--AKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 351 ell~-~~~DILiPaA~~~~It~~na~~-i~--AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
+++. .++|+++-|+... .+.+-+.. ++ ..++|| -|+ | .++.++ .+++|+.+.
T Consensus 85 ~ll~~~~vD~V~i~tp~~-~h~~~~~~al~aGkhV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 85 NMLKDKNIDAVFVSSPWE-WHHEHGVAAMKAGKIVGME---VSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp HHTTCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred HHhcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 6775 4799999998643 44444433 33 368888 353 3 355554 356786554
No 196
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.17 E-value=0.085 Score=46.85 Aligned_cols=108 Identities=10% Similarity=0.137 Sum_probs=60.9
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCC-HHHHHHHHHHc-CCcccCCCCcccCCCCc---
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEIN-YKDLHTYKITK-GTIKGYPGTKSAPTDIM--- 353 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLD-i~~L~~~~~~~-g~v~~~~~a~~i~~ell--- 353 (535)
...+|+|.|+|.+|+.+++.|.+.|..|+.|. -| .+.+....... ..+.-+.+ ...+.+.|
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid-------------~~~~~~~~~~~~~~~~~~~~i~g-d~~~~~~l~~a 67 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVIS-------------NLPEDDIKQLEQRLGDNADVIPG-DSNDSSVLKKA 67 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEE-------------CCCHHHHHHHHHHHCTTCEEEES-CTTSHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEE-------------CCChHHHHHHHHhhcCCCeEEEc-CCCCHHHHHHc
Confidence 35689999999999999999999999999854 32 23222222211 00110000 00011222
Q ss_pred -cccceEEeecccccccc---ccccccc-c-ceEEEecCCCCCCHHHHHHHHhCCce
Q psy1913 354 -FDKVDILVPAAIEKVIR---KSNADKV-Q-AKIIVEAANGPLTPAAHAMLLKKNVL 404 (535)
Q Consensus 354 -~~~~DILiPaA~~~~It---~~na~~i-~-AkiIvEgAN~p~T~eA~~iL~~rGI~ 404 (535)
-.++|++|-|......+ ...+.++ . .++|+-. |+| +..+.|++-|+.
T Consensus 68 ~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~-~~~---~~~~~l~~~G~~ 120 (153)
T 1id1_A 68 GIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAV-SDS---KNLNKIKMVHPD 120 (153)
T ss_dssp TTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEEC-SSG---GGHHHHHTTCCS
T ss_pred ChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEE-CCH---HHHHHHHHcCCC
Confidence 24789999887654333 2334444 2 3666643 444 444567787874
No 197
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.16 E-value=0.11 Score=52.92 Aligned_cols=41 Identities=20% Similarity=0.207 Sum_probs=34.5
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHH
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYK 333 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~ 333 (535)
-++|+|+|.|++|..+|..|.+.|..|+. .|.+.+.+.+..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l-------------~d~~~~~~~~~~ 46 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKL-------------YDIEPRQITGAL 46 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSCHHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHH
Confidence 46899999999999999999999999988 557777766554
No 198
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=93.15 E-value=0.76 Score=47.62 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=29.8
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
-.+|.|-|||.+|+.++|.+.+.|.+||+|-|.
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~veivainDp 39 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKGVKVVAVNDP 39 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eeEEEEECCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 369999999999999999999989999998764
No 199
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=93.09 E-value=0.14 Score=51.40 Aligned_cols=69 Identities=12% Similarity=0.193 Sum_probs=44.5
Q ss_pred CCcEEEEEccccHHH-HHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-
Q psy1913 279 ENKTYIVQGFGNVGF-HAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF- 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~-~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~- 354 (535)
+-.+|+|+|+|++|. ..+..|...+++|++|+|.+ .+.+.+..++.+. ....++ +++.
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~------------~~~~~~~a~~~~~------~~~~~~~~~ll~~ 64 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESD------------SDNRAKFTSLFPS------VPFAASAEQLITD 64 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSC------------TTSCHHHHHHSTT------CCBCSCHHHHHTC
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCC------------HHHHHHHHHhcCC------CcccCCHHHHhhC
Confidence 347999999999996 56777777899999998853 2223344444432 222333 4554
Q ss_pred ccceEEeeccc
Q psy1913 355 DKVDILVPAAI 365 (535)
Q Consensus 355 ~~~DILiPaA~ 365 (535)
.++|+++-|+.
T Consensus 65 ~~~D~V~i~tp 75 (336)
T 2p2s_A 65 ASIDLIACAVI 75 (336)
T ss_dssp TTCCEEEECSC
T ss_pred CCCCEEEEeCC
Confidence 46788877764
No 200
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=93.08 E-value=0.19 Score=50.38 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=60.2
Q ss_pred CCcEEEEEccccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCcc-cc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMF-DK 356 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell~-~~ 356 (535)
+-.+|+|.|+|++|...++.|.+ .+.+|++|+|.+ .+.+.+ .| .+ ...++ ++++ .+
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~------------~~~~~~----~g----~~-~~~~~-~l~~~~~ 65 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRN------------PAEVPF----EL----QP-FRVVS-DIEQLES 65 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-----------------------CC----TT-SCEES-SGGGSSS
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCC------------HHHHHH----cC----CC-cCCHH-HHHhCCC
Confidence 35799999999999999999987 578999988743 222211 22 11 11122 3332 58
Q ss_pred ceEEeeccccccccccccccc---cceEEEecCCCCC----CHHHH---HHHHhCCceee
Q psy1913 357 VDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPL----TPAAH---AMLLKKNVLII 406 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~----T~eA~---~iL~~rGI~vi 406 (535)
+|+++-|+.. ..+.+.+... ...+|+| -|+ ..++. +..++.|+.+.
T Consensus 66 ~DvViiatp~-~~h~~~~~~al~aG~~Vi~e---kP~~a~~~~~~~~l~~~a~~~g~~~~ 121 (304)
T 3bio_A 66 VDVALVCSPS-REVERTALEILKKGICTADS---FDIHDGILALRRSLGDAAGKSGAAAV 121 (304)
T ss_dssp CCEEEECSCH-HHHHHHHHHHHTTTCEEEEC---CCCGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred CCEEEECCCc-hhhHHHHHHHHHcCCeEEEC---CCCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 9999998853 3344444333 3467877 343 22333 44567787654
No 201
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.08 E-value=0.12 Score=53.64 Aligned_cols=74 Identities=20% Similarity=0.272 Sum_probs=49.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcc--cCCCCcccCCCCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIK--GYPGTKSAPTDIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~--~~~~a~~i~~ell~ 354 (535)
++.|++|.|.|+|.+|..+|+.+...|++|++ .|.+.+.+....+..|.-. .+.....+. +++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~-------------~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~-~~l- 229 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVTV-------------LDINIDKLRQLDAEFCGRIHTRYSSAYELE-GAV- 229 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------EESCHHHHHHHHHHTTTSSEEEECCHHHHH-HHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEE-------------EeCCHHHHHHHHHhcCCeeEeccCCHHHHH-HHH-
Confidence 46899999999999999999999999999888 4466777665554333110 000000000 222
Q ss_pred ccceEEeeccc
Q psy1913 355 DKVDILVPAAI 365 (535)
Q Consensus 355 ~~~DILiPaA~ 365 (535)
..+|++|-|+.
T Consensus 230 ~~aDvVi~~~~ 240 (377)
T 2vhw_A 230 KRADLVIGAVL 240 (377)
T ss_dssp HHCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 37899998875
No 202
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=93.07 E-value=0.14 Score=49.21 Aligned_cols=47 Identities=19% Similarity=0.226 Sum_probs=38.6
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+++|+++.|.|. |.+|+++|+.|.+.|++|+. .+.+.+.+.+..++.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~-------------~~r~~~~~~~~~~~~ 50 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIV-------------SDINAEGAKAAAASI 50 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHHHh
Confidence 478999999985 78999999999999999987 446677776665554
No 203
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=93.04 E-value=0.66 Score=47.79 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=28.3
Q ss_pred cEEEEEccccHHHHHHHHHHHC---CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG---RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~---GakVVaVsD~ 312 (535)
.+|+|.|||.+|+.+.+.|.++ ...||+|.|.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~ 37 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT 37 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC
Confidence 4899999999999999999886 3899998874
No 204
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.99 E-value=0.035 Score=56.64 Aligned_cols=31 Identities=16% Similarity=0.343 Sum_probs=28.0
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
+++++|+|+|+|++|..+|+.|.+.|.+|+.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~ 44 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTV 44 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEEE
Confidence 4578999999999999999999999998765
No 205
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=92.98 E-value=0.44 Score=42.68 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=59.5
Q ss_pred CcEEEEEcc----ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc
Q psy1913 280 NKTYIVQGF----GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM 353 (535)
Q Consensus 280 g~~VaIQGf----GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell 353 (535)
-++|+|+|. |++|+.+++.|.+.|++|+.| ||++. .+. |...++. ++-
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--------np~~~---------------~i~---G~~~y~sl~~l~ 75 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--------NPKYE---------------EVL---GRKCYPSVLDIP 75 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTCS---------------EET---TEECBSSGGGCS
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--------CCCCC---------------eEC---CeeccCCHHHcC
Confidence 369999999 799999999999999997764 34330 111 1222222 332
Q ss_pred cccceEEeeccccccccccccc---cccceEEEecCCCCCCHHHHHHHHhCCceee
Q psy1913 354 FDKVDILVPAAIEKVIRKSNAD---KVQAKIIVEAANGPLTPAAHAMLLKKNVLII 406 (535)
Q Consensus 354 ~~~~DILiPaA~~~~It~~na~---~i~AkiIvEgAN~p~T~eA~~iL~~rGI~vi 406 (535)
.++|+.+-|.... ...+-++ ...++.|+--. +-...++.++++++|+.++
T Consensus 76 -~~vDlvvi~vp~~-~~~~vv~~~~~~gi~~i~~~~-g~~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 76 -DKIEVVDLFVKPK-LTMEYVEQAIKKGAKVVWFQY-NTYNREASKKADEAGLIIV 128 (144)
T ss_dssp -SCCSEEEECSCHH-HHHHHHHHHHHHTCSEEEECT-TCCCHHHHHHHHHTTCEEE
T ss_pred -CCCCEEEEEeCHH-HHHHHHHHHHHcCCCEEEECC-CchHHHHHHHHHHcCCEEE
Confidence 3577777665432 1122221 22344555332 3347888899999999986
No 206
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=92.97 E-value=0.11 Score=52.26 Aligned_cols=104 Identities=8% Similarity=0.140 Sum_probs=66.1
Q ss_pred cEEEEEccccHHHHHHHHHHHCC---CeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGR---AKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF- 354 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~G---akVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~- 354 (535)
.+|+|+|+|++|...++.|.+.. ++|++|+| .|.+...+..++.+.- ...++ +++.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d------------~~~~~a~~~a~~~~~~------~~~~~~~~ll~~ 64 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAA------------RDLSRAKEFAQKHDIP------KAYGSYEELAKD 64 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEEC------------SSHHHHHHHHHHHTCS------CEESSHHHHHHC
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEc------------CCHHHHHHHHHHcCCC------cccCCHHHHhcC
Confidence 58999999999999998887653 58999876 4566676766665421 22333 5664
Q ss_pred ccceEEeeccccccccccccccc---cceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 355 DKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
.++|+++-|+. +..+.+.+... ...++||= |+ | .|++++ .+++|+.+.
T Consensus 65 ~~vD~V~i~tp-~~~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~~a~~~~~~~~ 121 (334)
T 3ohs_X 65 PNVEVAYVGTQ-HPQHKAAVMLCLAAGKAVLCEK---PMGVNAAEVREMVTEARSRGLFLM 121 (334)
T ss_dssp TTCCEEEECCC-GGGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEECCC-cHHHHHHHHHHHhcCCEEEEEC---CCCCCHHHHHHHHHHHHHhCCEEE
Confidence 47899988874 44455444332 23677773 42 2 344443 356676554
No 207
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=92.96 E-value=0.16 Score=51.26 Aligned_cols=71 Identities=17% Similarity=0.141 Sum_probs=44.3
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHH--------CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRR--------GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA 348 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e--------~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i 348 (535)
.|+..+|+|+|+|.+|+.-++.+.. .+++||||+|. |.+.+.+..++.+. ...+
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~------------~~~~a~~~a~~~g~------~~~y 83 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA------------NAGLAEARAGEFGF------EKAT 83 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--------------TTHHHHHHHHTC------SEEE
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC------------CHHHHHHHHHHhCC------Ceec
Confidence 4677899999999999866555533 47899999874 44455566666542 1223
Q ss_pred CC--CCcc-ccceEEeeccc
Q psy1913 349 PT--DIMF-DKVDILVPAAI 365 (535)
Q Consensus 349 ~~--ell~-~~~DILiPaA~ 365 (535)
++ ++|+ .++|+++-|+.
T Consensus 84 ~d~~ell~~~~iDaV~IatP 103 (393)
T 4fb5_A 84 ADWRALIADPEVDVVSVTTP 103 (393)
T ss_dssp SCHHHHHHCTTCCEEEECSC
T ss_pred CCHHHHhcCCCCcEEEECCC
Confidence 33 4553 46777776653
No 208
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.90 E-value=0.17 Score=50.87 Aligned_cols=102 Identities=19% Similarity=0.267 Sum_probs=60.8
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCC----CeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGR----AKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DI 352 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~G----akVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--el 352 (535)
+.++|.|+|.|++|..+|..|.+.| ..|+. ||.+- +.+.+.++. +.| ....+. +.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v--------~~r~~---~~~~~~~l~-~~G-------~~~~~~~~e~ 81 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMA--------SSPDM---DLATVSALR-KMG-------VKLTPHNKET 81 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEE--------ECSCT---TSHHHHHHH-HHT-------CEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEE--------ECCCc---cHHHHHHHH-HcC-------CEEeCChHHH
Confidence 3468999999999999999999999 56654 22221 101333332 222 222222 32
Q ss_pred ccccceEEeeccccccccc---ccccccc-ceEEEecCCCCCCHHHHHHHHh
Q psy1913 353 MFDKVDILVPAAIEKVIRK---SNADKVQ-AKIIVEAANGPLTPAAHAMLLK 400 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~---~na~~i~-AkiIvEgAN~p~T~eA~~iL~~ 400 (535)
. .+|||+|-|.....+.+ +-.+.++ -++|+.-+|+-...+..+.|.+
T Consensus 82 ~-~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~ 132 (322)
T 2izz_A 82 V-QHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSA 132 (322)
T ss_dssp H-HHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHT
T ss_pred h-ccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhh
Confidence 2 47999999987543322 1222333 3689998887544455566765
No 209
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=92.88 E-value=0.73 Score=46.66 Aligned_cols=108 Identities=17% Similarity=0.261 Sum_probs=69.3
Q ss_pred CCcEEEEEccccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFD 355 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~ 355 (535)
..++++|.|.|..|+..++.|.+ .+.+.|.|.| .+.+...+..++.+.. ++ ... .+. +.+
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~------------r~~~~a~~la~~~~~~-~~-~~~-~~~~~e~v-- 186 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYD------------VREKAAKKFVSYCEDR-GI-SAS-VQPAEEAS-- 186 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEEC------------SSHHHHHHHHHHHHHT-TC-CEE-ECCHHHHT--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEEC------------CCHHHHHHHHHHHHhc-Cc-eEE-ECCHHHHh--
Confidence 57899999999999999998887 4666666554 4556666655443210 01 122 333 444
Q ss_pred cceEEeeccccc--cccccccccc--cceEEEecCCCCCCHHHHHHHHhCCceee
Q psy1913 356 KVDILVPAAIEK--VIRKSNADKV--QAKIIVEAANGPLTPAAHAMLLKKNVLII 406 (535)
Q Consensus 356 ~~DILiPaA~~~--~It~~na~~i--~AkiIvEgAN~p~T~eA~~iL~~rGI~vi 406 (535)
+|||++-|+... ++.. ..+ .+-+++.|+..|...|.+.-+.+++..|+
T Consensus 187 ~aDvVi~aTp~~~pv~~~---~~l~~G~~V~~ig~~~p~~~el~~~~~~~a~v~v 238 (322)
T 1omo_A 187 RCDVLVTTTPSRKPVVKA---EWVEEGTHINAIGADGPGKQELDVEILKKAKIVV 238 (322)
T ss_dssp SSSEEEECCCCSSCCBCG---GGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEE
T ss_pred CCCEEEEeeCCCCceecH---HHcCCCeEEEECCCCCCCccccCHHHHhcCeEEE
Confidence 799999998743 2221 233 35788899999976665555566665444
No 210
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=92.78 E-value=0.27 Score=49.78 Aligned_cols=105 Identities=11% Similarity=0.149 Sum_probs=61.6
Q ss_pred CcEEEEEccccHHHH-HHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-
Q psy1913 280 NKTYIVQGFGNVGFH-AARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF- 354 (535)
Q Consensus 280 g~~VaIQGfGnVG~~-~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~- 354 (535)
-.+|+|+|+|.+|.. .+..|.+. +++|++|+|. |.+.+. + .+++...+++ +++.
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~------------~~~~~~---~------~~~~~~~~~~~~~ll~~ 65 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS------------DASKVH---A------DWPAIPVVSDPQMLFND 65 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS------------CHHHHH---T------TCSSCCEESCHHHHHHC
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC------------CHHHHH---h------hCCCCceECCHHHHhcC
Confidence 379999999999986 67777765 8999999864 344332 1 2334444454 5664
Q ss_pred ccceEEeecccccccccccccc-cc--ceEEEecCCCCCCHHHHHH---HHhCCceee
Q psy1913 355 DKVDILVPAAIEKVIRKSNADK-VQ--AKIIVEAANGPLTPAAHAM---LLKKNVLII 406 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~-i~--AkiIvEgAN~p~T~eA~~i---L~~rGI~vi 406 (535)
.++|+++-|+ ++..+.+-+.. ++ ..++||=-=.....+++++ .+++|+.+.
T Consensus 66 ~~vD~V~i~t-p~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 66 PSIDLIVIPT-PNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp SSCCEEEECS-CTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEeC-ChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 4689888887 44444444332 22 2577763111112344443 346666554
No 211
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=92.75 E-value=0.068 Score=56.30 Aligned_cols=107 Identities=13% Similarity=0.024 Sum_probs=68.5
Q ss_pred CcEEEEEcc----ccHHHHHHHHHHHC--CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--C
Q psy1913 280 NKTYIVQGF----GNVGFHAARYFRRG--RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--D 351 (535)
Q Consensus 280 g~~VaIQGf----GnVG~~~A~~L~e~--GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--e 351 (535)
-.+|+|+|+ |.+|...++.|.+. +++||+|+| .|.+.+.+..++.|. +.....+. +
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d------------~~~~~~~~~a~~~g~----~~~~~~~~~~~ 83 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYS------------PKIETSIATIQRLKL----SNATAFPTLES 83 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEEC------------SSHHHHHHHHHHTTC----TTCEEESSHHH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEe------------CCHHHHHHHHHHcCC----CcceeeCCHHH
Confidence 479999999 99999888888876 889999876 556666666666541 11223344 6
Q ss_pred Ccc-ccceEEeeccccccccccccc-ccc--------ceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 352 IMF-DKVDILVPAAIEKVIRKSNAD-KVQ--------AKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 352 ll~-~~~DILiPaA~~~~It~~na~-~i~--------AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
++. .++|+++-|+... .+.+.+. -++ ..++||= |+ | .+++++ .+++|+.+.
T Consensus 84 ll~~~~vD~V~i~tp~~-~H~~~~~~al~aG~~~~~~khVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 150 (438)
T 3btv_A 84 FASSSTIDMIVIAIQVA-SHYEVVMPLLEFSKNNPNLKYLFVEW---ALACSLDQAESIYKAAAERGVQTI 150 (438)
T ss_dssp HHHCSSCSEEEECSCHH-HHHHHHHHHHHHGGGCTTCCEEEEES---SCCSSHHHHHHHHHHHHTTTCEEE
T ss_pred HhcCCCCCEEEEeCCcH-HHHHHHHHHHHCCCCcccceeEEecC---cccCCHHHHHHHHHHHHHcCCeEE
Confidence 664 4799999987533 3333332 222 3488882 42 2 344443 456777654
No 212
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.72 E-value=0.062 Score=57.61 Aligned_cols=119 Identities=8% Similarity=0.126 Sum_probs=65.0
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-----
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT----- 350 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~----- 350 (535)
++++++|+|.|.|.+|+.+++.|.+. |.+|+. ++ -+.+.+.+..+..+ +... .. .+++
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v-~~------------R~~~ka~~la~~~~-~~~~-~~-D~~d~~~l~ 83 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTV-AC------------RTLANAQALAKPSG-SKAI-SL-DVTDDSALD 83 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEE-EE------------SSHHHHHHHHGGGT-CEEE-EC-CTTCHHHHH
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEE-EE------------CCHHHHHHHHHhcC-CcEE-EE-ecCCHHHHH
Confidence 46889999999999999999999998 677554 33 44555555543321 1000 00 0111
Q ss_pred CCccccceEEeecccccccccccc-cccc--ceEEEecCCCCCCHHHHHHHHhCCceeeccccccc
Q psy1913 351 DIMFDKVDILVPAAIEKVIRKSNA-DKVQ--AKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANA 413 (535)
Q Consensus 351 ell~~~~DILiPaA~~~~It~~na-~~i~--AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNa 413 (535)
+++ .++|++|-|+.... +..-+ ..+. ..++......|.+.+..+..+++|+.+++..-.+.
T Consensus 84 ~~l-~~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~P 147 (467)
T 2axq_A 84 KVL-ADNDVVISLIPYTF-HPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLDP 147 (467)
T ss_dssp HHH-HTSSEEEECSCGGG-HHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBTT
T ss_pred HHH-cCCCEEEECCchhh-hHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcCc
Confidence 122 37999999987442 22111 1122 23333222233333334556788998887765443
No 213
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.72 E-value=0.14 Score=52.78 Aligned_cols=75 Identities=19% Similarity=0.163 Sum_probs=49.8
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCc-c-cCCCCcccCCCCcc
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTI-K-GYPGTKSAPTDIMF 354 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v-~-~~~~a~~i~~ell~ 354 (535)
++.+++|.|.|+|.+|..+++.+...|++|++ .|.+.+.+....+..|.- . .......+. +++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~-------------~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~-~~~- 227 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTI-------------LDVNHKRLQYLDDVFGGRVITLTATEANIK-KSV- 227 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------EESCHHHHHHHHHHTTTSEEEEECCHHHHH-HHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEE-------------EECCHHHHHHHHHhcCceEEEecCCHHHHH-HHH-
Confidence 47889999999999999999999999999888 446677666554433310 0 000000000 222
Q ss_pred ccceEEeecccc
Q psy1913 355 DKVDILVPAAIE 366 (535)
Q Consensus 355 ~~~DILiPaA~~ 366 (535)
..+|++|-|+..
T Consensus 228 ~~~DvVi~~~g~ 239 (369)
T 2eez_A 228 QHADLLIGAVLV 239 (369)
T ss_dssp HHCSEEEECCC-
T ss_pred hCCCEEEECCCC
Confidence 378999998863
No 214
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=92.71 E-value=0.18 Score=55.19 Aligned_cols=177 Identities=11% Similarity=0.115 Sum_probs=118.7
Q ss_pred CCHHHHHHHHHHHHHHHhccCccCCCCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCch
Q psy1913 172 YNNRELERITRKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESAT 251 (535)
Q Consensus 172 ~s~~Eler~~r~f~~~L~~~~~iGp~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aT 251 (535)
.+-.|...+...|+.++.. .+||..-|-=.|++.. .---|.+.|+.. .-|+-.+ -.-|
T Consensus 206 v~g~eYd~fvdefv~av~~--~fG~~~~I~~EDf~~~--~af~il~ryr~~--------ipvFnDD----------iqGT 263 (564)
T 1pj3_A 206 DRTQQYDDLIDEFMKAITD--RYGRNTLIQFEDFGNH--NAFRFLRKYREK--------YCTFNDD----------IQGT 263 (564)
T ss_dssp CCSHHHHHHHHHHHHHHHH--HHCTTCEEEECSCCHH--HHHHHHHHHTTT--------SSEEEHH----------HHHH
T ss_pred CchhhHHHHHHHHHHHHHH--HcCCCcEEeehhcCCc--cHHHHHHHhccC--------CCEeCCC----------CchH
Confidence 4667888899999999886 6888887888888743 233456777541 1233222 1234
Q ss_pred HHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHH----CCC------eEEEEecCCceEeCCCC
Q psy1913 252 GRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRR----GRA------KCLAIVEHDTAIVPDKG 321 (535)
Q Consensus 252 g~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e----~Ga------kVVaVsD~~G~iynp~G 321 (535)
|-=+..++.++ ++..|. .|+..||++.|.|..|..+|++|.. .|. +=+-+.|++|-|+...+
T Consensus 264 a~V~lAgllnA------lki~gk--~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~ 335 (564)
T 1pj3_A 264 AAVALAGLLAA------QKVISK--PISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRK 335 (564)
T ss_dssp HHHHHHHHHHH------HHHHCC--CGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCS
T ss_pred HHHHHHHHHHH------HHHhCC--cHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCc
Confidence 44444445533 345674 4899999999999999999999986 784 45678999999998653
Q ss_pred CCCCHHHHHHHHHHcCCcccCCCCccc--CC--CCc-cccceEEeeccc-ccccccccccccc----ceEEEecCCC
Q psy1913 322 TEINYKDLHTYKITKGTIKGYPGTKSA--PT--DIM-FDKVDILVPAAI-EKVIRKSNADKVQ----AKIIVEAANG 388 (535)
Q Consensus 322 ~dLDi~~L~~~~~~~g~v~~~~~a~~i--~~--ell-~~~~DILiPaA~-~~~It~~na~~i~----AkiIvEgAN~ 388 (535)
.||+.. ++..- . ..... .. +.+ .+++||||=++. ++++|++-+..+. -.||---||-
T Consensus 336 ~~l~~~-----k~~~A---~--~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 402 (564)
T 1pj3_A 336 AKIDSY-----QEPFT---H--SAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNP 402 (564)
T ss_dssp SCCCTT-----TGGGC---B--CCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred ccchHH-----HHHHH---H--hcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 125532 22110 0 00011 12 333 358999999996 8999999998885 4888888883
No 215
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=92.70 E-value=0.028 Score=56.21 Aligned_cols=103 Identities=16% Similarity=0.146 Sum_probs=61.9
Q ss_pred CcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-c
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-D 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~ 355 (535)
-.+|+|+|+|++|...++.|.+. +.++++|+|. |.+.+.+..++ ....+. +++. .
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~------------~~~~~~~~~~~---------~~~~~~~~~~l~~~ 68 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS------------NPDNLALVPPG---------CVIESDWRSVVSAP 68 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES------------CHHHHTTCCTT---------CEEESSTHHHHTCT
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC------------CHHHHHHHHhh---------CcccCCHHHHhhCC
Confidence 36999999999999999999885 7899998774 33333221111 112232 5664 5
Q ss_pred cceEEeecccccccccccccc-ccc--eEEEecCCCCC--C-HHHHHH---HHhCCceeec
Q psy1913 356 KVDILVPAAIEKVIRKSNADK-VQA--KIIVEAANGPL--T-PAAHAM---LLKKNVLIIP 407 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~-i~A--kiIvEgAN~p~--T-~eA~~i---L~~rGI~viP 407 (535)
++|+++-|.... .+.+.+.. +++ .+++|- |+ + .++.++ .+++|+.+..
T Consensus 69 ~~D~V~i~tp~~-~h~~~~~~al~~Gk~v~~eK---P~~~~~~~~~~l~~~a~~~g~~~~~ 125 (315)
T 3c1a_A 69 EVEAVIIATPPA-THAEITLAAIASGKAVLVEK---PLTLDLAEAEAVAAAAKATGVMVWV 125 (315)
T ss_dssp TCCEEEEESCGG-GHHHHHHHHHHTTCEEEEES---SSCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred CCCEEEEeCChH-HHHHHHHHHHHCCCcEEEcC---CCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 899999887543 34444433 332 577773 42 3 234433 4566765543
No 216
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.68 E-value=0.11 Score=50.49 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=28.9
Q ss_pred CCCCcEEEEEccc---cHHHHHHHHHHHCCCeEEE
Q psy1913 277 CMENKTYIVQGFG---NVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 277 ~l~g~~VaIQGfG---nVG~~~A~~L~e~GakVVa 308 (535)
+|+||++.|.|.+ -+|..+|+.|++.|++|+.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi 37 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVF 37 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEE
Confidence 4799999999964 5999999999999999887
No 217
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.64 E-value=0.23 Score=47.80 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=59.6
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccceE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVDI 359 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~DI 359 (535)
++|.|.|+|++|..+|+.|.+.|..|+. .| ++ -+.+.+.+..+. | .. -+. +++ .+||+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~-~~-------~~---~~~~~~~~~~~~-g-------~~-~~~~~~~-~~aDv 59 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVT-SL-------EG---RSPSTIERARTV-G-------VT-ETSEEDV-YSCPV 59 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEE-CC-------TT---CCHHHHHHHHHH-T-------CE-ECCHHHH-HTSSE
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEE-eC-------Cc---cCHHHHHHHHHC-C-------Cc-CCHHHHH-hcCCE
Confidence 3799999999999999999999998876 22 11 134444444332 2 11 122 333 48999
Q ss_pred Eeecccccccccc---ccccccceEEEecCCCCC--CHHHHHHHHhCC
Q psy1913 360 LVPAAIEKVIRKS---NADKVQAKIIVEAANGPL--TPAAHAMLLKKN 402 (535)
Q Consensus 360 LiPaA~~~~It~~---na~~i~AkiIvEgAN~p~--T~eA~~iL~~rG 402 (535)
+|-|......... -.+.++. +|+.-+.... +.+..+.|.++|
T Consensus 60 vi~~v~~~~~~~~~~~~~~~~~~-~vi~~s~~~~~~~~~l~~~~~~~g 106 (264)
T 1i36_A 60 VISAVTPGVALGAARRAGRHVRG-IYVDINNISPETVRMASSLIEKGG 106 (264)
T ss_dssp EEECSCGGGHHHHHHHHHTTCCS-EEEECSCCCHHHHHHHHHHCSSSE
T ss_pred EEEECCCHHHHHHHHHHHHhcCc-EEEEccCCCHHHHHHHHHHHhhCC
Confidence 9999876543222 1223334 8887754431 223444555555
No 218
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=92.56 E-value=0.093 Score=54.10 Aligned_cols=84 Identities=19% Similarity=0.167 Sum_probs=55.9
Q ss_pred cEEEEEccc-cHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-c
Q psy1913 281 KTYIVQGFG-NVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-D 355 (535)
Q Consensus 281 ~~VaIQGfG-nVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~ 355 (535)
.+|+|+|+| .+|...+..|.+ .+++|++|+| .|.+...+..++.| ...+++ +++. .
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d------------~~~~~~~~~a~~~g-------~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACD------------PNEDVRERFGKEYG-------IPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEEC------------SCHHHHHHHHHHHT-------CCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEe------------CCHHHHHHHHHHcC-------CCeECCHHHHHcCC
Confidence 689999999 899888888877 4789999876 55666666666553 222334 5665 4
Q ss_pred cceEEeeccccccccccccccc---cceEEEe
Q psy1913 356 KVDILVPAAIEKVIRKSNADKV---QAKIIVE 384 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~i---~AkiIvE 384 (535)
++|+++-|+.. ..+.+.+... ...++||
T Consensus 64 ~vD~V~i~tp~-~~H~~~~~~al~aGk~Vl~E 94 (387)
T 3moi_A 64 QMDAVYIASPH-QFHCEHVVQASEQGLHIIVE 94 (387)
T ss_dssp CCSEEEECSCG-GGHHHHHHHHHHTTCEEEEC
T ss_pred CCCEEEEcCCc-HHHHHHHHHHHHCCCceeee
Confidence 78999988754 3344333322 2356666
No 219
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.51 E-value=0.16 Score=50.31 Aligned_cols=28 Identities=21% Similarity=0.103 Sum_probs=26.5
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
++|+|.|.|++|..+|..|.+.|..|+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~ 43 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVL 43 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 5899999999999999999999999887
No 220
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=92.46 E-value=0.67 Score=48.59 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=28.3
Q ss_pred cEEEEEccccHHHHHHHHHHHC---CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG---RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~---GakVVaVsD~ 312 (535)
.+|+|.|||.+|+.+++.|.++ ...||+|.|.
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~ 37 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT 37 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC
Confidence 4899999999999999999886 4899999874
No 221
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.45 E-value=0.45 Score=47.46 Aligned_cols=104 Identities=13% Similarity=0.185 Sum_probs=63.3
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-CCccccce
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-DIMFDKVD 358 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-ell~~~~D 358 (535)
++++.|.|.|.+|+.++..|.+.|.+|+ |.+++ - ++..++. +.+ ...++. ++ . ++|
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~-V~nRt-------~-----~ka~~la-~~~-------~~~~~~~~l-~-~~D 174 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVS-VLNRS-------S-----RGLDFFQ-RLG-------CDCFMEPPK-S-AFD 174 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS-------C-----TTHHHHH-HHT-------CEEESSCCS-S-CCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEE-EEeCC-------H-----HHHHHHH-HCC-------CeEecHHHh-c-cCC
Confidence 7899999999999999999999996654 44432 1 2222333 222 122222 33 2 899
Q ss_pred EEeecccccc-----ccccccc-cc-cceEEEecCCCCCCHHHHHHHHhCCceeec
Q psy1913 359 ILVPAAIEKV-----IRKSNAD-KV-QAKIIVEAANGPLTPAAHAMLLKKNVLIIP 407 (535)
Q Consensus 359 ILiPaA~~~~-----It~~na~-~i-~AkiIvEgAN~p~T~eA~~iL~~rGI~viP 407 (535)
|+|-|+.-+. +..+-.. .+ ...+|++-.=+|.|+ --+..+++|+.+++
T Consensus 175 iVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P~T~-ll~~A~~~G~~~~~ 229 (269)
T 3phh_A 175 LIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGFLTP-FLSLAKELKTPFQD 229 (269)
T ss_dssp EEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSSCCH-HHHHHHHTTCCEEC
T ss_pred EEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCCchH-HHHHHHHCcCEEEC
Confidence 9997766442 2222000 23 246888888888555 33445788876543
No 222
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=92.43 E-value=0.26 Score=49.77 Aligned_cols=106 Identities=10% Similarity=0.094 Sum_probs=69.6
Q ss_pred CCcEEEEEccc-cHHHHHHHHHHHC--CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc
Q psy1913 279 ENKTYIVQGFG-NVGFHAARYFRRG--RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM 353 (535)
Q Consensus 279 ~g~~VaIQGfG-nVG~~~A~~L~e~--GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell 353 (535)
+-.+|+|+|+| .+|...+..|.+. +++|++|+| .|.+.+.+..++.+. ...+++ +++
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d------------~~~~~~~~~a~~~~~------~~~~~~~~~ll 78 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTS------------RTRSHAEEFAKMVGN------PAVFDSYEELL 78 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEEC------------SSHHHHHHHHHHHSS------CEEESCHHHHH
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEc------------CCHHHHHHHHHHhCC------CcccCCHHHHh
Confidence 45799999999 7999888888775 689999876 566777777766542 123344 566
Q ss_pred c-ccceEEeecccccccccccccc-cc--ceEEEecCCCCC--C-HHHHHHH---HhCCceee
Q psy1913 354 F-DKVDILVPAAIEKVIRKSNADK-VQ--AKIIVEAANGPL--T-PAAHAML---LKKNVLII 406 (535)
Q Consensus 354 ~-~~~DILiPaA~~~~It~~na~~-i~--AkiIvEgAN~p~--T-~eA~~iL---~~rGI~vi 406 (535)
. .++|+++-|+.. ..+.+-+.. ++ ..++|| -|+ | .|+++++ +++|+.+.
T Consensus 79 ~~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~E---KPla~~~~ea~~l~~~a~~~g~~~~ 137 (340)
T 1zh8_A 79 ESGLVDAVDLTLPV-ELNLPFIEKALRKGVHVICE---KPISTDVETGKKVVELSEKSEKTVY 137 (340)
T ss_dssp HSSCCSEEEECCCG-GGHHHHHHHHHHTTCEEEEE---SSSSSSHHHHHHHHHHHHHCSSCEE
T ss_pred cCCCCCEEEEeCCc-hHHHHHHHHHHHCCCcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 4 479999998753 344444332 22 368888 352 3 4555543 56776654
No 223
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=92.29 E-value=0.73 Score=47.41 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=28.4
Q ss_pred cEEEEEccccHHHHHHHHHHH---C-CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRR---G-RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e---~-GakVVaVsD~ 312 (535)
.+|+|.|||.+|+.+.+.|.+ + ...||+|.|.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~ 38 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL 38 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC
Confidence 489999999999999999988 4 7899998863
No 224
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.28 E-value=0.78 Score=47.08 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=28.1
Q ss_pred cEEEEEccccHHHHHHHHHHHC---CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG---RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~---GakVVaVsD~ 312 (535)
.+|+|.|||-+|+.+.|.|.++ ...||+|.|.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~ 35 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL 35 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC
Confidence 4799999999999999999875 5899999873
No 225
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=92.27 E-value=0.21 Score=51.66 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=47.5
Q ss_pred cEEEEEccccHHHHHHHHHHHC---------CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC-
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG---------RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT- 350 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~---------GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~- 350 (535)
.||+|+|+|.+|+.-++.|.+. +++||||+| .|.+.+.+..++.+.. ..+++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d------------~~~~~a~~~a~~~~~~------~~y~d~ 88 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALAD------------QDQAMAERHAAKLGAE------KAYGDW 88 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEEC------------SSHHHHHHHHHHHTCS------EEESSH
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEc------------CCHHHHHHHHHHcCCC------eEECCH
Confidence 6999999999999877777653 679999975 6677887777776522 22333
Q ss_pred -CCcc-ccceEEeeccc
Q psy1913 351 -DIMF-DKVDILVPAAI 365 (535)
Q Consensus 351 -ell~-~~~DILiPaA~ 365 (535)
++|. .++|+++-|+.
T Consensus 89 ~~ll~~~~vD~V~I~tp 105 (412)
T 4gqa_A 89 RELVNDPQVDVVDITSP 105 (412)
T ss_dssp HHHHHCTTCCEEEECSC
T ss_pred HHHhcCCCCCEEEECCC
Confidence 5553 46777776653
No 226
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.26 E-value=1.4 Score=43.71 Aligned_cols=126 Identities=17% Similarity=0.134 Sum_probs=78.7
Q ss_pred CchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHH
Q psy1913 249 SATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKD 328 (535)
Q Consensus 249 ~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~ 328 (535)
.--+.|...+++ ..|.. .+++|.|.|.|.+|+.++..|.+.|++-|.|.+ -+.++
T Consensus 101 NTD~~G~~~~l~----------~~~~~---~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~n------------Rt~~k 155 (271)
T 1npy_A 101 NTDYIAIVKLIE----------KYHLN---KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYA------------RNVKT 155 (271)
T ss_dssp CHHHHHHHHHHH----------HTTCC---TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEEC------------SCHHH
T ss_pred cCCHHHHHHHHH----------HhCCC---CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEe------------CCHHH
Confidence 345677766665 23442 578999999999999999999999985444443 34455
Q ss_pred HHHHHHHcCCcccCCCCcccCCCCccccceEEeeccccccccc---cc--c--ccc-cceEEEecCCCC-CCHHHHHHHH
Q psy1913 329 LHTYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRK---SN--A--DKV-QAKIIVEAANGP-LTPAAHAMLL 399 (535)
Q Consensus 329 L~~~~~~~g~v~~~~~a~~i~~ell~~~~DILiPaA~~~~It~---~n--a--~~i-~AkiIvEgAN~p-~T~eA~~iL~ 399 (535)
..++.++.+. . +..++-..++||+|-|+.-+.... +. . ..+ ...+|++-.-+| -|+- .+.-+
T Consensus 156 a~~la~~~~~-------~-~~~~~~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T~l-l~~A~ 226 (271)
T 1npy_A 156 GQYLAALYGY-------A-YINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPF-IRYAQ 226 (271)
T ss_dssp HHHHHHHHTC-------E-EESCCTTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCHH-HHHHH
T ss_pred HHHHHHHcCC-------c-cchhhhcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCCHH-HHHHH
Confidence 5555554431 1 111111247999999987554221 11 1 223 247899999888 4643 34457
Q ss_pred hCCceeecc
Q psy1913 400 KKNVLIIPD 408 (535)
Q Consensus 400 ~rGI~viPD 408 (535)
++|+.+++.
T Consensus 227 ~~G~~~i~G 235 (271)
T 1npy_A 227 ARGKQTISG 235 (271)
T ss_dssp HTTCEEECH
T ss_pred HCCCEEECC
Confidence 889877543
No 227
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=92.21 E-value=0.85 Score=47.04 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=28.6
Q ss_pred cEEEEEccccHHHHHHHHHHHC----CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG----RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~----GakVVaVsD~ 312 (535)
.+|+|-|||-+|+.+.+.|.+. ...||+|.|.
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~ 37 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL 37 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC
Confidence 4899999999999999999887 5799999984
No 228
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=92.20 E-value=0.49 Score=42.48 Aligned_cols=109 Identities=16% Similarity=0.246 Sum_probs=64.7
Q ss_pred CcEEEEEcc----ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCc
Q psy1913 280 NKTYIVQGF----GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIM 353 (535)
Q Consensus 280 g~~VaIQGf----GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell 353 (535)
-++|+|+|. |+.|+.+++.|.+.|++|.. +||+. . ...+. |...++. ++-
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~--------vnp~~--~-----------g~~i~---G~~~~~sl~el~ 68 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIP--------VSPKV--A-----------GKTLL---GQQGYATLADVP 68 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEE--------ECSSS--T-----------TSEET---TEECCSSTTTCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEE--------eCCcc--c-----------ccccC---CeeccCCHHHcC
Confidence 368999999 89999999999999998665 33432 0 00111 2222222 332
Q ss_pred cccceEEeecccccccccccccc---ccce-EEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchh
Q psy1913 354 FDKVDILVPAAIEKVIRKSNADK---VQAK-IIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVS 419 (535)
Q Consensus 354 ~~~~DILiPaA~~~~It~~na~~---i~Ak-iIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivS 419 (535)
.++|+.+-|.... ...+-+.. ..++ +++.. +-.+.+..++++++|+.++ =-|+=|++..
T Consensus 69 -~~~Dlvii~vp~~-~v~~v~~~~~~~g~~~i~i~~--~~~~~~l~~~a~~~Gi~~i---gpnc~g~~~~ 131 (145)
T 2duw_A 69 -EKVDMVDVFRNSE-AAWGVAQEAIAIGAKTLWLQL--GVINEQAAVLAREAGLSVV---MDRCPAIELP 131 (145)
T ss_dssp -SCCSEEECCSCST-HHHHHHHHHHHHTCCEEECCT--TCCCHHHHHHHHTTTCEEE---CSCCHHHHST
T ss_pred -CCCCEEEEEeCHH-HHHHHHHHHHHcCCCEEEEcC--ChHHHHHHHHHHHcCCEEE---cCCeeeEEcc
Confidence 3678888776532 22222221 1222 55543 2347888899999999987 1355565554
No 229
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=92.11 E-value=0.11 Score=53.08 Aligned_cols=114 Identities=15% Similarity=0.162 Sum_probs=65.1
Q ss_pred CCCC--cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CC
Q psy1913 277 CMEN--KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DI 352 (535)
Q Consensus 277 ~l~g--~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--el 352 (535)
+++| ++|+|.|.|.||+.+|++|.+. ..|.. +|++.+.+.+.++....+ .. .+++ ++
T Consensus 11 ~~~g~~mkilvlGaG~vG~~~~~~L~~~-~~v~~-------------~~~~~~~~~~~~~~~~~~-~~----d~~d~~~l 71 (365)
T 3abi_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYI-------------GDVNNENLEKVKEFATPL-KV----DASNFDKL 71 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTTT-SEEEE-------------EESCHHHHHHHTTTSEEE-EC----CTTCHHHH
T ss_pred cccCCccEEEEECCCHHHHHHHHHHhcC-CCeEE-------------EEcCHHHHHHHhccCCcE-EE----ecCCHHHH
Confidence 3455 5899999999999999999764 56554 347777766553221100 00 0122 22
Q ss_pred c--cccceEEeeccccccccccccccc-cc-eEEEecCCCC-CCHHHHHHHHhCCceeecccc
Q psy1913 353 M--FDKVDILVPAAIEKVIRKSNADKV-QA-KIIVEAANGP-LTPAAHAMLLKKNVLIIPDIF 410 (535)
Q Consensus 353 l--~~~~DILiPaA~~~~It~~na~~i-~A-kiIvEgAN~p-~T~eA~~iL~~rGI~viPD~l 410 (535)
. -.++||+|-|+... .+..-+... ++ +-++..+--+ .+.+.++...++|+.++|+.=
T Consensus 72 ~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G 133 (365)
T 3abi_A 72 VEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAG 133 (365)
T ss_dssp HHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCB
T ss_pred HHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCC
Confidence 2 24899999988654 333222211 11 3344444333 445667778899999998753
No 230
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=92.11 E-value=0.12 Score=51.63 Aligned_cols=115 Identities=14% Similarity=0.206 Sum_probs=68.8
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCC-CCcccCC--CC
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYP-GTKSAPT--DI 352 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~-~a~~i~~--el 352 (535)
++-.+|+|.| +|.+|+.+++.+.+ .+..+|++.|.++.- ..| .|+.++. +.. +....++ ++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~--~~G--~d~gel~----------g~~~gv~v~~dl~~l 70 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP--QLG--QDAGAFL----------GKQTGVALTDDIERV 70 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT--TTT--SBTTTTT----------TCCCSCBCBCCHHHH
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc--ccc--ccHHHHh----------CCCCCceecCCHHHH
Confidence 3447999999 99999999998876 588999999876431 135 4433322 221 2222223 44
Q ss_pred ccccceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHHHH----hCCceeecccc
Q psy1913 353 MFDKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAMLL----KKNVLIIPDIF 410 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~iL~----~rGI~viPD~l 410 (535)
+. ++||+|-++..... .+|+... ..++|++ .=+ .+++..+.|. +.++++.|-+.
T Consensus 71 l~-~~DVVIDfT~p~a~-~~~~~~al~~G~~vVig-TTG-~s~~~~~~L~~aa~~~~vv~a~N~s 131 (272)
T 4f3y_A 71 CA-EADYLIDFTLPEGT-LVHLDAALRHDVKLVIG-TTG-FSEPQKAQLRAAGEKIALVFSANMS 131 (272)
T ss_dssp HH-HCSEEEECSCHHHH-HHHHHHHHHHTCEEEEC-CCC-CCHHHHHHHHHHTTTSEEEECSCCC
T ss_pred hc-CCCEEEEcCCHHHH-HHHHHHHHHcCCCEEEE-CCC-CCHHHHHHHHHHhccCCEEEECCCC
Confidence 54 79999999865433 3444333 3467763 323 5665444343 33566666554
No 231
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.07 E-value=2 Score=42.68 Aligned_cols=130 Identities=18% Similarity=0.267 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHH
Q psy1913 251 TGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLH 330 (535)
Q Consensus 251 Tg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~ 330 (535)
-+.|...+++ ..|. +++++++.|.|.|-.++.++-.|++.|++-|.|.++ +.++..
T Consensus 108 D~~Gf~~~L~----------~~g~--~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nR------------t~~ra~ 163 (269)
T 3tum_A 108 DGAGFLGAAH----------KHGF--EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDP------------STARMG 163 (269)
T ss_dssp HHHHHHHHHH----------HTTC--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS------------CHHHHH
T ss_pred ChHHHHHHHH----------HhCC--CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC------------CHHHHH
Confidence 3677666655 3455 468999999999999999999999999877776654 334444
Q ss_pred HHHHHcCCcccCCCCcccCCCCccccceEEeecccccccccc--c-----ccccc-ceEEEecCCCC-CCHHHHHHHHhC
Q psy1913 331 TYKITKGTIKGYPGTKSAPTDIMFDKVDILVPAAIEKVIRKS--N-----ADKVQ-AKIIVEAANGP-LTPAAHAMLLKK 401 (535)
Q Consensus 331 ~~~~~~g~v~~~~~a~~i~~ell~~~~DILiPaA~~~~It~~--n-----a~~i~-AkiIvEgAN~p-~T~eA~~iL~~r 401 (535)
+..+..+. .|+........---.++|++|-|+.-+.-... . ...++ ..+|.+-.=+| .||=... -+++
T Consensus 164 ~la~~~~~--~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~-A~~~ 240 (269)
T 3tum_A 164 AVCELLGN--GFPGLTVSTQFSGLEDFDLVANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSPEITPLLNR-ARQV 240 (269)
T ss_dssp HHHHHHHH--HCTTCEEESCCSCSTTCSEEEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCSSSSCHHHHH-HHHH
T ss_pred HHHHHHhc--cCCcceehhhhhhhhcccccccCCccccCCCCCCCCChHHHhccCCCcEEEEEccCCCCCHHHHH-HHHC
Confidence 44333211 12221111111112478999999864432211 1 12233 35888999888 5775544 3677
Q ss_pred Cceeec
Q psy1913 402 NVLIIP 407 (535)
Q Consensus 402 GI~viP 407 (535)
|..+++
T Consensus 241 G~~~~~ 246 (269)
T 3tum_A 241 GCRIQT 246 (269)
T ss_dssp TCEEEC
T ss_pred cCEEEC
Confidence 876654
No 232
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=92.01 E-value=0.47 Score=48.79 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=28.8
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
.+|+|.|||.+|+.+++.|.+. +.+||+|.|.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~ 36 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDP 36 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECC
Confidence 5899999999999999999886 7899999873
No 233
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=91.99 E-value=0.12 Score=52.61 Aligned_cols=106 Identities=10% Similarity=0.135 Sum_probs=61.1
Q ss_pred CCcEEEEEccccHHHH-HHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 279 ENKTYIVQGFGNVGFH-AARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~-~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
+-.+|+|+|+|++|.. .+..|.+. +++|++|+|. |.+. ..++. ++...+++ +++.
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~------------~~~~---~~~~~------~~~~~~~~~~~ll~ 62 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS------------RTEE---VKRDF------PDAEVVHELEEITN 62 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS------------CHHH---HHHHC------TTSEEESSTHHHHT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC------------CHHH---HHhhC------CCCceECCHHHHhc
Confidence 3479999999999985 67777664 8999999864 3333 22232 23343444 5664
Q ss_pred -ccceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHhCCceee
Q psy1913 355 -DKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAM---LLKKNVLII 406 (535)
Q Consensus 355 -~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~i---L~~rGI~vi 406 (535)
.++|+++-|+.. ..+.+-+... ...++||=-=.....+++++ .+++|+.+.
T Consensus 63 ~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~ 120 (358)
T 3gdo_A 63 DPAIELVIVTTPS-GLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLS 120 (358)
T ss_dssp CTTCCEEEECSCT-TTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCEEEEcCCc-HHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 578999988753 3444433322 23677763111112344443 345566544
No 234
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=91.96 E-value=0.76 Score=47.22 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=28.5
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
.+|+|.|||-+|+.+.|.|.++ ...||+|.|.
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~ 34 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL 34 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 4899999999999999999876 6899999874
No 235
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.95 E-value=0.6 Score=46.97 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=29.5
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~ 207 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFA 207 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEe
Confidence 58999999999999999999999999999853
No 236
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=91.91 E-value=0.2 Score=51.26 Aligned_cols=83 Identities=16% Similarity=0.209 Sum_probs=51.8
Q ss_pred CcEEEEEccccHHHH-HHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-
Q psy1913 280 NKTYIVQGFGNVGFH-AARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF- 354 (535)
Q Consensus 280 g~~VaIQGfGnVG~~-~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~- 354 (535)
-.+|+|+|+|.+|.. .+..|.+. +++|++|+|. |.+.+. ++ |++...+++ +++.
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~------------~~~~~~---~~------~~~~~~~~~~~~ll~~ 65 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR------------DEEKVK---RD------LPDVTVIASPEAAVQH 65 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS------------CHHHHH---HH------CTTSEEESCHHHHHTC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC------------CHHHHH---hh------CCCCcEECCHHHHhcC
Confidence 469999999999985 67777664 8999998864 344332 22 233444444 5664
Q ss_pred ccceEEeeccccccccccccccc-c--ceEEEe
Q psy1913 355 DKVDILVPAAIEKVIRKSNADKV-Q--AKIIVE 384 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~i-~--AkiIvE 384 (535)
.++|+++-|+. +..+.+.+... + ..++||
T Consensus 66 ~~~D~V~i~tp-~~~H~~~~~~al~aGk~Vl~E 97 (364)
T 3e82_A 66 PDVDLVVIASP-NATHAPLARLALNAGKHVVVD 97 (364)
T ss_dssp TTCSEEEECSC-GGGHHHHHHHHHHTTCEEEEC
T ss_pred CCCCEEEEeCC-hHHHHHHHHHHHHCCCcEEEe
Confidence 57888888864 33444433322 2 356665
No 237
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.89 E-value=0.059 Score=57.56 Aligned_cols=71 Identities=17% Similarity=0.227 Sum_probs=49.8
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCCcccCCCCc----
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGTKSAPTDIM---- 353 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a~~i~~ell---- 353 (535)
.++|+|.|+|.||+++|+.|.+.|..|+.| |-|.+.+.++.++.+- +.+ .+. ++++|
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vI-------------d~d~~~~~~~~~~~~~~~i~G--d~~--~~~~L~~Ag 65 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIV-------------DKDGDRLRELQDKYDLRVVNG--HAS--HPDVLHEAG 65 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEE-------------ESCHHHHHHHHHHSSCEEEES--CTT--CHHHHHHHT
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEE-------------ECCHHHHHHHHHhcCcEEEEE--cCC--CHHHHHhcC
Confidence 578999999999999999999999998873 3677777777665431 111 111 11333
Q ss_pred cccceEEeeccccc
Q psy1913 354 FDKVDILVPAAIEK 367 (535)
Q Consensus 354 ~~~~DILiPaA~~~ 367 (535)
-.+||+||-++-.+
T Consensus 66 i~~ad~~ia~t~~D 79 (461)
T 4g65_A 66 AQDADMLVAVTNTD 79 (461)
T ss_dssp TTTCSEEEECCSCH
T ss_pred CCcCCEEEEEcCCh
Confidence 25899999776643
No 238
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=91.85 E-value=0.6 Score=50.23 Aligned_cols=171 Identities=11% Similarity=0.123 Sum_probs=103.0
Q ss_pred HHHHHHhccCccCCCCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCCCchHHHHHHHHHHH
Q psy1913 183 KFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRESATGRGVFTAAEIL 262 (535)
Q Consensus 183 ~f~~~L~~~~~iGp~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~~aTg~GV~~~i~~~ 262 (535)
.++..+.+. +| -|-=.|++... ---|.+.|+..... -|+-.+ -.-||-=+..++.++
T Consensus 153 e~v~~~~P~--fG---~InlEDf~ap~--af~il~ryr~~~~i------pvFnDD----------~qGTA~V~lAgllnA 209 (487)
T 3nv9_A 153 EFVQRIQHT--FG---AINLEDISQPN--CYKILDVLRESCDI------PVWHDD----------QQGTASVTLAGLLNA 209 (487)
T ss_dssp HHHHHHGGG--CS---EEEECSCCTTH--HHHHHHHHHHHCSS------CEEETT----------THHHHHHHHHHHHHH
T ss_pred HHHHHhCCC--CC---eecHhhcCCch--HHHHHHHHHhhccC------Cccccc----------cchHHHHHHHHHHHH
Confidence 467777752 22 14557777543 23456777653221 122221 223444444455544
Q ss_pred HhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCC--eEEEEecCCceEeCCCCCCCCHH----HHHHHHHHc
Q psy1913 263 VNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA--KCLAIVEHDTAIVPDKGTEINYK----DLHTYKITK 336 (535)
Q Consensus 263 l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD~~G~iynp~G~dLDi~----~L~~~~~~~ 336 (535)
+ +..|. +|+..||+|.|.|..|..+|++|...|. +=+-+.|++|.|+.... |++.. .-.++.+.+
T Consensus 210 l------ki~gk--~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~-~l~~~~~~~~k~~~A~~~ 280 (487)
T 3nv9_A 210 L------KLVKK--DIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGRE-DIKKDTRFYRKWEICETT 280 (487)
T ss_dssp H------HHHTC--CGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCH-HHHHCGGGHHHHHHHHHS
T ss_pred H------HHhCC--ChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcc-hhhhhcccHHHHHHHHhc
Confidence 3 45664 4899999999999999999999999998 56678999999997552 23110 001112221
Q ss_pred CCcccCCCCcccCC--CCccccceEEeeccc--cccccccccccccc-eEEEecCCCC--CCHH
Q psy1913 337 GTIKGYPGTKSAPT--DIMFDKVDILVPAAI--EKVIRKSNADKVQA-KIIVEAANGP--LTPA 393 (535)
Q Consensus 337 g~v~~~~~a~~i~~--ell~~~~DILiPaA~--~~~It~~na~~i~A-kiIvEgAN~p--~T~e 393 (535)
. ...... +.+. .+||||=++. .+++|++-+..+.. .||---||-- +|||
T Consensus 281 n-------~~~~~~L~eav~-~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~pe 336 (487)
T 3nv9_A 281 N-------PSKFGSIAEACV-GADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPY 336 (487)
T ss_dssp C-------TTCCCSHHHHHT-TCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCHH
T ss_pred c-------cccCCCHHHHHh-cCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCHH
Confidence 1 001111 3333 3599999994 58999999988854 6777778752 4554
No 239
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.79 E-value=1.6 Score=46.74 Aligned_cols=42 Identities=10% Similarity=0.203 Sum_probs=35.3
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~ 334 (535)
.++|+|.|.|.||..+|..|++.|..|++ -|.|.+.+..+.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~-------------~d~~~~~v~~l~~ 49 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFC-------------LDVDQAKIDILNN 49 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHT
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEE-------------EECCHHHHHHHHC
Confidence 47999999999999999999999999998 4467666666544
No 240
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=91.78 E-value=0.14 Score=49.20 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=37.8
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+++|+++.|.| .|-+|+++|+.|++.|++|+.+ |.+.+.+.+..++.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-------------~r~~~~~~~~~~~~ 52 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIA-------------DIDIERARQAAAEI 52 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHHh
Confidence 36899999999 4889999999999999999883 36666666665543
No 241
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=91.71 E-value=0.39 Score=48.91 Aligned_cols=50 Identities=24% Similarity=0.217 Sum_probs=40.8
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEE
Q psy1913 247 RESATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGF-GNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 247 r~~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVa 308 (535)
-.+.|-+|+...++ +.+. +++|++++|.|- ..||+-+|.+|.+.+|.|.-
T Consensus 158 ~~PcTp~gv~~lL~----------~~~i--~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi 208 (303)
T 4b4u_A 158 YGSATPAGIMTILK----------ENNI--EIAGKHAVVVGRSAILGKPMAMMLLQANATVTI 208 (303)
T ss_dssp CCCHHHHHHHHHHH----------HTTC--CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred ccCccHHHHHHHHH----------HHCC--CCCCCEEEEEeccccccchHHHHHHhcCCEEEE
Confidence 35789999876555 4565 589999999995 56899999999999998764
No 242
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=91.58 E-value=0.21 Score=49.75 Aligned_cols=113 Identities=11% Similarity=0.154 Sum_probs=65.8
Q ss_pred CCcEEEEEcc-ccHHHHHHHHHH-HCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCC--CCcccCC--CC
Q psy1913 279 ENKTYIVQGF-GNVGFHAARYFR-RGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYP--GTKSAPT--DI 352 (535)
Q Consensus 279 ~g~~VaIQGf-GnVG~~~A~~L~-e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~--~a~~i~~--el 352 (535)
+..+|+|.|+ |.+|+.+++.+. ..|..||++.|.+..-. .| -|.. .+.+.. +....+. ++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~--~g--~d~~----------~~~g~~~~~v~~~~dl~~~ 69 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LG--SDAG----------ELAGAGKTGVTVQSSLDAV 69 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CS--CCTT----------CSSSSSCCSCCEESCSTTT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhh--hh--hhHH----------HHcCCCcCCceecCCHHHH
Confidence 4579999998 999999999876 46899999988653110 13 2221 111111 1111222 45
Q ss_pred ccccceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHHHHh----CCceeeccc
Q psy1913 353 MFDKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAMLLK----KNVLIIPDI 409 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~iL~~----rGI~viPD~ 409 (535)
+. ++|++|-++.+.. +.+++... ...+|++-. + .|++..+.|.+ .++++.|.+
T Consensus 70 l~-~~DvVIDft~p~~-~~~~~~~a~~~G~~vVigTt-G-~~~e~~~~L~~~a~~~~vv~a~N~ 129 (273)
T 1dih_A 70 KD-DFDVFIDFTRPEG-TLNHLAFCRQHGKGMVIGTT-G-FDEAGKQAIRDAAADIAIVFAANF 129 (273)
T ss_dssp TT-SCSEEEECSCHHH-HHHHHHHHHHTTCEEEECCC-C-CCHHHHHHHHHHTTTSCEEECSCC
T ss_pred hc-CCCEEEEcCChHH-HHHHHHHHHhCCCCEEEECC-C-CCHHHHHHHHHhcCCCCEEEEecC
Confidence 54 8999998886443 23444333 347888766 3 55544444432 355555543
No 243
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=91.57 E-value=0.13 Score=52.11 Aligned_cols=87 Identities=15% Similarity=0.100 Sum_probs=55.7
Q ss_pred CcEEEEEccccHHHHHHHHHHH--CCCeEEEEecCCceEeCCCCCCCCHHH-HHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRR--GRAKCLAIVEHDTAIVPDKGTEINYKD-LHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e--~GakVVaVsD~~G~iynp~G~dLDi~~-L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
..+|+|.|+|++|..+++.|.+ .++++++|+|.+ .+. .++..++.|.. ...+. +++.
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~------------~~~~~~~~a~~~g~~------~~~~~~e~ll~ 65 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGID------------AASDGLARAQRMGVT------TTYAGVEGLIK 65 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSC------------TTCHHHHHHHHTTCC------EESSHHHHHHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCC------------hhhhHHHHHHHcCCC------cccCCHHHHHh
Confidence 4699999999999999999965 578999998753 222 23333444311 01112 4544
Q ss_pred ----ccceEEeeccccccccccccccc-----cceEEEec
Q psy1913 355 ----DKVDILVPAAIEKVIRKSNADKV-----QAKIIVEA 385 (535)
Q Consensus 355 ----~~~DILiPaA~~~~It~~na~~i-----~AkiIvEg 385 (535)
.++|+.+-|+. +..+.+.+... ...+|+|-
T Consensus 66 ~~~~~~iDvV~~atp-~~~h~~~a~~al~a~~Gk~Vi~ek 104 (312)
T 1nvm_B 66 LPEFADIDFVFDATS-ASAHVQNEALLRQAKPGIRLIDLT 104 (312)
T ss_dssp SGGGGGEEEEEECSC-HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ccCCCCCcEEEECCC-hHHHHHHHHHHHHhCCCCEEEEcC
Confidence 47999999987 55666665544 23466644
No 244
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.55 E-value=0.22 Score=53.58 Aligned_cols=42 Identities=21% Similarity=0.125 Sum_probs=35.8
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~ 334 (535)
-++|+|+|.|++|..+|..|.+.|..|+. .|.+.+.+.+..+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l-------------~D~~~e~l~~~~~ 46 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLL-------------YDISAEALTRAID 46 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEE-------------ECSCHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEE-------------EECCHHHHHHHHH
Confidence 35899999999999999999999999987 5677777766554
No 245
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=91.46 E-value=0.36 Score=51.58 Aligned_cols=107 Identities=9% Similarity=-0.003 Sum_probs=67.6
Q ss_pred CCcEEEEEcc----ccHHHHHHHHHHHC--CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--
Q psy1913 279 ENKTYIVQGF----GNVGFHAARYFRRG--RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-- 350 (535)
Q Consensus 279 ~g~~VaIQGf----GnVG~~~A~~L~e~--GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-- 350 (535)
+-.+|+|+|+ |.+|...++.|.+. +++||||+| .|.+.+.+..++.| .+....++.
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d------------~~~~~a~~~a~~~g----~~~~~~~~d~~ 101 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYN------------PTLKSSLQTIEQLQ----LKHATGFDSLE 101 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEEC------------SCHHHHHHHHHHTT----CTTCEEESCHH
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEe------------CCHHHHHHHHHHcC----CCcceeeCCHH
Confidence 3479999999 99999888888875 889999876 55666766666654 122223444
Q ss_pred CCcc-ccceEEeeccccccccccccc-cccc--------eEEEecCCCCC--C-HHHHHH---HHhCC-cee
Q psy1913 351 DIMF-DKVDILVPAAIEKVIRKSNAD-KVQA--------KIIVEAANGPL--T-PAAHAM---LLKKN-VLI 405 (535)
Q Consensus 351 ell~-~~~DILiPaA~~~~It~~na~-~i~A--------kiIvEgAN~p~--T-~eA~~i---L~~rG-I~v 405 (535)
+++. .++|+++-|+.. ..+.+.+. -+++ .++||= |+ | .+++++ .+++| +.+
T Consensus 102 ell~~~~vD~V~I~tp~-~~H~~~~~~al~aG~~~~~~khVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 169 (479)
T 2nvw_A 102 SFAQYKDIDMIVVSVKV-PEHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQT 169 (479)
T ss_dssp HHHHCTTCSEEEECSCH-HHHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEE
T ss_pred HHhcCCCCCEEEEcCCc-HHHHHHHHHHHHCCCCcCCceeEEEeC---CCcCCHHHHHHHHHHHHHcCCeEE
Confidence 6664 578999988753 33333332 2222 377773 52 2 344443 45677 554
No 246
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.45 E-value=2.4 Score=45.08 Aligned_cols=29 Identities=17% Similarity=0.235 Sum_probs=27.5
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
..|++|.|.|.||..+|..|++.|..|++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~ 36 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVC 36 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEE
Confidence 36999999999999999999999999998
No 247
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.33 E-value=1.3 Score=45.56 Aligned_cols=114 Identities=14% Similarity=0.188 Sum_probs=72.1
Q ss_pred CCcEEEEEccccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCC--CcccCC--CCc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPG--TKSAPT--DIM 353 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~--a~~i~~--ell 353 (535)
..++|+|.|.|..|+..++.|.. .+.+-|.|.| .+.+...++.++... +++ ....+. +.+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~------------r~~~~a~~la~~~~~---~~g~~~~~~~~~~eav 192 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYD------------TDPLATAKLIANLKE---YSGLTIRRASSVAEAV 192 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEEC------------SSHHHHHHHHHHHTT---CTTCEEEECSSHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEc------------CCHHHHHHHHHHHHh---ccCceEEEeCCHHHHH
Confidence 57899999999999999887754 5655555443 556777666655321 112 122232 333
Q ss_pred cccceEEeeccccc----cccccccccccceEEEecCCCCCCHHHHHHHHhCCceeecccc
Q psy1913 354 FDKVDILVPAAIEK----VIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIF 410 (535)
Q Consensus 354 ~~~~DILiPaA~~~----~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~l 410 (535)
.+|||++-|+... ++..+.. +=.+-+++.|+..|-..|.+..+.+++..|+ |..
T Consensus 193 -~~aDiVi~aTps~~~~pvl~~~~l-~~G~~V~~vgs~~p~~~El~~~~~~~a~v~v-D~~ 250 (350)
T 1x7d_A 193 -KGVDIITTVTADKAYATIITPDML-EPGMHLNAVGGDCPGKTELHADVLRNARVFV-EYE 250 (350)
T ss_dssp -TTCSEEEECCCCSSEEEEECGGGC-CTTCEEEECSCCBTTBEEECHHHHHTSEEEE-SSH
T ss_pred -hcCCEEEEeccCCCCCceecHHHc-CCCCEEEECCCCCCCceeeCHHHHhcCcEEE-CCH
Confidence 3799999998854 2332211 1135788899998877676666677786554 543
No 248
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=91.25 E-value=0.53 Score=46.27 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=55.0
Q ss_pred cEEEEEcc-ccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCccccce
Q psy1913 281 KTYIVQGF-GNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGf-GnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell~~~~D 358 (535)
.+|+|.|+ |.+|+.+++.+.+. +..|+++.|.. .|+ + +++..++|
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~--------~dl--~-----------------------~~~~~~~D 47 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG--------DPL--S-----------------------LLTDGNTE 47 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT--------CCT--H-----------------------HHHHTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC--------CCH--H-----------------------HHhccCCc
Confidence 37999996 99999999999865 99999988763 112 1 12223679
Q ss_pred EEeeccccccccccccccc---cceEEEecCCCCCCHHHHHHH
Q psy1913 359 ILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAML 398 (535)
Q Consensus 359 ILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~iL 398 (535)
|+|-++.+..+ .+|+... ...+|++-. + .+++..+.|
T Consensus 48 vvIDfT~p~a~-~~~~~~a~~~g~~~VigTT-G-~~~e~~~~l 87 (245)
T 1p9l_A 48 VVIDFTHPDVV-MGNLEFLIDNGIHAVVGTT-G-FTAERFQQV 87 (245)
T ss_dssp EEEECSCTTTH-HHHHHHHHHTTCEEEECCC-C-CCHHHHHHH
T ss_pred EEEEccChHHH-HHHHHHHHHcCCCEEEcCC-C-CCHHHHHHH
Confidence 99999866544 4555432 457777655 3 566544333
No 249
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=91.06 E-value=0.69 Score=41.26 Aligned_cols=108 Identities=19% Similarity=0.214 Sum_probs=62.6
Q ss_pred CcEEEEEcc----ccHHHHHHHHHHHCCCeEEEEecCCceEeCCC--CCCCCHHHHHHHHHHcCCcccCCCCcccCC--C
Q psy1913 280 NKTYIVQGF----GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDK--GTEINYKDLHTYKITKGTIKGYPGTKSAPT--D 351 (535)
Q Consensus 280 g~~VaIQGf----GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~--G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--e 351 (535)
-++|+|+|. |+.|+.+++.|.+.|++|..| ||+ + ..+. |...++. +
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v--------np~~~~---------------~~i~---G~~~~~sl~e 66 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV--------NPRFQG---------------EELF---GEEAVASLLD 66 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE--------CGGGTT---------------SEET---TEECBSSGGG
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe--------CCCccc---------------CcCC---CEEecCCHHH
Confidence 369999999 899999999999999987663 343 3 1111 1122222 2
Q ss_pred CccccceEEeeccc----cccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcchhh
Q psy1913 352 IMFDKVDILVPAAI----EKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVTVSY 420 (535)
Q Consensus 352 ll~~~~DILiPaA~----~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVivSy 420 (535)
+- .++|+.+-|.. ..++.+--...+++ +++- + +..+.++.++.+++|+.++ --|+=|++...
T Consensus 67 l~-~~vDlavi~vp~~~~~~v~~~~~~~gi~~-i~~~-~-g~~~~~~~~~a~~~Gir~v---gpnc~g~~~~~ 132 (140)
T 1iuk_A 67 LK-EPVDILDVFRPPSALMDHLPEVLALRPGL-VWLQ-S-GIRHPEFEKALKEAGIPVV---ADRCLMVEHKR 132 (140)
T ss_dssp CC-SCCSEEEECSCHHHHTTTHHHHHHHCCSC-EEEC-T-TCCCHHHHHHHHHTTCCEE---ESCCHHHHHHH
T ss_pred CC-CCCCEEEEEeCHHHHHHHHHHHHHcCCCE-EEEc-C-CcCHHHHHHHHHHcCCEEE---cCCccceEChh
Confidence 22 25666655543 33332211122332 3332 1 2246888899999999875 23666665543
No 250
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.04 E-value=0.53 Score=41.49 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=61.7
Q ss_pred cEEEEEcc----ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 281 KTYIVQGF----GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 281 ~~VaIQGf----GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
++|||.|. +.+|..+.+.|.+.|++|+.| ||.+ ..+.+. +.++. ++-+
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pV--------nP~~---------------~~i~G~---~~y~sl~dlp~ 58 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPV--------GRKK---------------GEVLGK---TIINERPVIEG 58 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEE--------SSSC---------------SEETTE---ECBCSCCCCTT
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEE--------CCCC---------------CcCCCe---eccCChHHCCC
Confidence 68999997 679999999999999998874 5554 112111 11111 2222
Q ss_pred ccceEEeecc---c-cccccccccccccceEEEecCCCCCCHHHHHHHHhCCceeeccccccccCcc
Q psy1913 355 DKVDILVPAA---I-EKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLIIPDIFANAGGVT 417 (535)
Q Consensus 355 ~~~DILiPaA---~-~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~viPD~laNaGGVi 417 (535)
+|+.+-|. . ..++.+--+..++ .|+ -.-|...+|+.++.++.||.++| |+=||.
T Consensus 59 --vDlavi~~p~~~v~~~v~e~~~~g~k--~v~-~~~G~~~~e~~~~a~~~Girvv~----nC~gv~ 116 (122)
T 3ff4_A 59 --VDTVTLYINPQNQLSEYNYILSLKPK--RVI-FNPGTENEELEEILSENGIEPVI----GCTLVM 116 (122)
T ss_dssp --CCEEEECSCHHHHGGGHHHHHHHCCS--EEE-ECTTCCCHHHHHHHHHTTCEEEE----SCHHHH
T ss_pred --CCEEEEEeCHHHHHHHHHHHHhcCCC--EEE-ECCCCChHHHHHHHHHcCCeEEC----CcCeEE
Confidence 45554443 2 3333322222334 333 23345678999999999999985 554543
No 251
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=91.03 E-value=0.069 Score=54.01 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=69.6
Q ss_pred CcEEEEEc-cccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccC--CCCcccCC--CCc
Q psy1913 280 NKTYIVQG-FGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGY--PGTKSAPT--DIM 353 (535)
Q Consensus 280 g~~VaIQG-fGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~--~~a~~i~~--ell 353 (535)
-.||+|.| +|++|+.+++.+.+ .+..+|++.|.++. +..| .|+.++ .+. .+....++ +++
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~--~~~G--~d~gel----------~G~~~~gv~v~~dl~~ll 86 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS--SFVD--KDASIL----------IGSDFLGVRITDDPESAF 86 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC--TTTT--SBGGGG----------TTCSCCSCBCBSCHHHHT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc--cccc--cchHHh----------hccCcCCceeeCCHHHHh
Confidence 36999999 99999999999875 68999999998643 1245 554433 111 12222233 455
Q ss_pred cccceEEeeccccccccccccccc---cceEEEecCCCCCCHHHHHHH----HhCCceeeccccc
Q psy1913 354 FDKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAAHAML----LKKNVLIIPDIFA 411 (535)
Q Consensus 354 ~~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA~~iL----~~rGI~viPD~la 411 (535)
. ++||+|-++..... .+|+... ...+|++- =+ .+++..+.| ++.++++.|-+..
T Consensus 87 ~-~aDVvIDFT~p~a~-~~~~~~~l~~Gv~vViGT-TG-~~~e~~~~L~~aa~~~~~~~a~N~Si 147 (288)
T 3ijp_A 87 S-NTEGILDFSQPQAS-VLYANYAAQKSLIHIIGT-TG-FSKTEEAQIADFAKYTTIVKSGNMSL 147 (288)
T ss_dssp T-SCSEEEECSCHHHH-HHHHHHHHHHTCEEEECC-CC-CCHHHHHHHHHHHTTSEEEECSCCCH
T ss_pred c-CCCEEEEcCCHHHH-HHHHHHHHHcCCCEEEEC-CC-CCHHHHHHHHHHhCcCCEEEECCCcH
Confidence 4 89999999865442 4454433 34666643 23 455433333 3345666666543
No 252
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=90.97 E-value=0.16 Score=51.78 Aligned_cols=106 Identities=10% Similarity=0.028 Sum_probs=63.5
Q ss_pred CCcEEEEEccccHHH-HHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc
Q psy1913 279 ENKTYIVQGFGNVGF-HAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF 354 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~-~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~ 354 (535)
+..+|+|+|+|++|. +.++.|.+. +++|++|+| .|.+.+.+..++ |++...+++ +++.
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d------------~~~~~~~~~a~~------~~~~~~~~~~~~ll~ 65 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACD------------SDLERARRVHRF------ISDIPVLDNVPAMLN 65 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEEC------------SSHHHHGGGGGT------SCSCCEESSHHHHHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEc------------CCHHHHHHHHHh------cCCCcccCCHHHHhc
Confidence 457999999999998 478888775 899999876 445555444333 223333444 5664
Q ss_pred -ccceEEeeccccccccccccccc-c--ceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 355 -DKVDILVPAAIEKVIRKSNADKV-Q--AKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 355 -~~~DILiPaA~~~~It~~na~~i-~--AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
.++|+++-|+.. ..+.+.+... + ..++||= |+ | .+++++ .+++|+.+.
T Consensus 66 ~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EK---Pla~~~~e~~~l~~~a~~~g~~~~ 123 (359)
T 3m2t_A 66 QVPLDAVVMAGPP-QLHFEMGLLAMSKGVNVFVEK---PPCATLEELETLIDAARRSDVVSG 123 (359)
T ss_dssp HSCCSEEEECSCH-HHHHHHHHHHHHTTCEEEECS---CSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCEEEEcCCc-HHHHHHHHHHHHCCCeEEEEC---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 468988877653 3333333222 2 3577763 42 2 344443 345666543
No 253
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.96 E-value=0.17 Score=48.79 Aligned_cols=47 Identities=21% Similarity=0.213 Sum_probs=37.7
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+++|+++.|.|. |.+|+++|+.|.+.|++|+.+ +.+.+.+.+..++.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~-------------~r~~~~~~~~~~~~ 52 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLT-------------GRNESNIARIREEF 52 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHHh
Confidence 478999999985 789999999999999999883 35666666665543
No 254
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.96 E-value=0.095 Score=49.79 Aligned_cols=107 Identities=13% Similarity=0.118 Sum_probs=62.3
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCc----cc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIM----FD 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell----~~ 355 (535)
.++|+|.|+|.+|+.+|+.|.+.|. |++| | -|.+.+.... .+ +.-+.+ ...+.+.| -.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vi-d------------~~~~~~~~~~--~~-~~~i~g-d~~~~~~l~~a~i~ 70 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLA-E------------DENVRKKVLR--SG-ANFVHG-DPTRVSDLEKANVR 70 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEE-S------------CGGGHHHHHH--TT-CEEEES-CTTCHHHHHHTTCT
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEE-E------------CCHHHHHHHh--cC-CeEEEc-CCCCHHHHHhcCcc
Confidence 4689999999999999999999998 7763 2 3344444433 22 111100 00011222 24
Q ss_pred cceEEeecccccccc---cccccccc--ceEEEecCCCCCCHHHHHHHHhCCce--eecc
Q psy1913 356 KVDILVPAAIEKVIR---KSNADKVQ--AKIIVEAANGPLTPAAHAMLLKKNVL--IIPD 408 (535)
Q Consensus 356 ~~DILiPaA~~~~It---~~na~~i~--AkiIvEgAN~p~T~eA~~iL~~rGI~--viPD 408 (535)
++|.+|-|......+ ...+.++. .++|+...| ++..+.|++.|+. +.|.
T Consensus 71 ~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~----~~~~~~l~~~G~~~vi~p~ 126 (234)
T 2aef_A 71 GARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER----YENIEQLRMAGADQVISPF 126 (234)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEECSS----GGGHHHHHHHTCSEEECHH
T ss_pred hhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEEECC----HhHHHHHHHCCCCEEECHH
Confidence 789999887654333 34444443 477877643 3444677777874 4454
No 255
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=90.94 E-value=0.12 Score=49.97 Aligned_cols=41 Identities=20% Similarity=0.296 Sum_probs=27.4
Q ss_pred HHhCCCCCCCCcEEEEEccccHHHHHHHH--HHHCCCeEEEEecCC
Q psy1913 270 CEIGLEPCMENKTYIVQGFGNVGFHAARY--FRRGRAKCLAIVEHD 313 (535)
Q Consensus 270 ~~~g~~~~l~g~~VaIQGfGnVG~~~A~~--L~e~GakVVaVsD~~ 313 (535)
+.+|++ +..+|+|.|.|++|..+++. +...|++|||+.|.+
T Consensus 78 ~~lg~~---~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~d 120 (215)
T 2vt3_A 78 KTLDQD---EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDIN 120 (215)
T ss_dssp HHHHHC------CEEEECCSHHHHHHHHCC------CCEEEEEESC
T ss_pred HHhCcC---CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCC
Confidence 345553 35789999999999999994 445699999998853
No 256
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.93 E-value=0.88 Score=46.43 Aligned_cols=119 Identities=11% Similarity=0.117 Sum_probs=65.6
Q ss_pred HhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCC-eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCCcc
Q psy1913 271 EIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGTKS 347 (535)
Q Consensus 271 ~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a~~ 347 (535)
..++. .|.+|+|.|.|.||..+++++...|+ +|+++ +.+.+.+. +.++.|. +.++.....
T Consensus 177 ~~~~~---~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~-------------~~~~~~~~-~a~~lGa~~vi~~~~~~~ 239 (370)
T 4ej6_A 177 LSGIK---AGSTVAILGGGVIGLLTVQLARLAGATTVILS-------------TRQATKRR-LAEEVGATATVDPSAGDV 239 (370)
T ss_dssp HHTCC---TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE-------------CSCHHHHH-HHHHHTCSEEECTTSSCH
T ss_pred hcCCC---CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE-------------CCCHHHHH-HHHHcCCCEEECCCCcCH
Confidence 45554 58999999999999999999999999 77773 34455543 3334442 112211111
Q ss_pred cCC--C---CccccceEEeeccccccccccccccc--cceEEEecCCC---CCCHHHHHHHHhCCceeec
Q psy1913 348 APT--D---IMFDKVDILVPAAIEKVIRKSNADKV--QAKIIVEAANG---PLTPAAHAMLLKKNVLIIP 407 (535)
Q Consensus 348 i~~--e---ll~~~~DILiPaA~~~~It~~na~~i--~AkiIvEgAN~---p~T~eA~~iL~~rGI~viP 407 (535)
... + +..-.+|+++-|+.....-..-...+ ..++|.=|... +.+..... |..|++.+.-
T Consensus 240 ~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~-~~~~~~~i~g 308 (370)
T 4ej6_A 240 VEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFD-ILFRELRVLG 308 (370)
T ss_dssp HHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHH-HHHTTCEEEE
T ss_pred HHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHH-HHhCCcEEEE
Confidence 111 1 22237899999886332222222222 34666655432 22222222 4566766653
No 257
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.80 E-value=0.49 Score=47.32 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=64.5
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcC-Cccc-CCCCc------ccCC-C
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKG-TIKG-YPGTK------SAPT-D 351 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g-~v~~-~~~a~------~i~~-e 351 (535)
++|+|.|.|++|..+|..|.+.|..|+.+. + + .. +..++.| .+.+ +.+.. ..++ +
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~-r-------~-------~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~ 66 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVS-R-------S-------DY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAA 66 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEEC-S-------T-------TH-HHHHHHCEEEEETTTCCEEECCSCEESCGG
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEe-C-------C-------hH-HHHHhCCcEEeecCCCcEEEeeeeeECCHH
Confidence 589999999999999999999999887643 1 1 11 2222233 2222 11211 1122 2
Q ss_pred CccccceEEeeccccccccccccccc----c-ceEEEecCCCCCC-HHHHHHHHhCCceee
Q psy1913 352 IMFDKVDILVPAAIEKVIRKSNADKV----Q-AKIIVEAANGPLT-PAAHAMLLKKNVLII 406 (535)
Q Consensus 352 ll~~~~DILiPaA~~~~It~~na~~i----~-AkiIvEgAN~p~T-~eA~~iL~~rGI~vi 406 (535)
-...++|++|-|.....+. +-++.+ . -.+|+-..||--. ....+.|-...|+..
T Consensus 67 ~~~~~~DlVilavK~~~~~-~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~vl~g 126 (320)
T 3i83_A 67 ELETKPDCTLLCIKVVEGA-DRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVISG 126 (320)
T ss_dssp GCSSCCSEEEECCCCCTTC-CHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCEEEE
T ss_pred HcCCCCCEEEEecCCCChH-HHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcEEEE
Confidence 2224899999998766654 333333 2 2578888998743 445555554444443
No 258
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.67 E-value=0.72 Score=45.07 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=30.7
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
.+++++|.|.|. |-+|+++++.|.+.|++|+++.
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~ 42 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTA 42 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEe
Confidence 467899999997 9999999999999999999854
No 259
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=90.53 E-value=0.23 Score=47.48 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=37.5
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+++++++.|.|. |.+|+++|+.|++.|++|+.+ +-+.+.+.+..++.
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~-------------~r~~~~~~~~~~~~ 53 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIV-------------DRDKAGAERVAGEI 53 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-------------cCCHHHHHHHHHHh
Confidence 468999999995 789999999999999999884 35666666665544
No 260
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=90.53 E-value=0.11 Score=50.43 Aligned_cols=110 Identities=13% Similarity=0.191 Sum_probs=64.4
Q ss_pred CCCHHHHHHHH--HHHHHHHhccCccCCCCcccCCCCCCChhhHHHHHHHHhhHhCCCccCCCceEecccCcCCCCCCCC
Q psy1913 171 KYNNRELERIT--RKFALELIKKNYVGPGIDVPAPDYNTSAREMSWFYDAYAKTLGSTNINALGMVTGKPLFLGGIRGRE 248 (535)
Q Consensus 171 ~~s~~Eler~~--r~f~~~L~~~~~iGp~~dipapDvgT~~~~Mawi~d~y~~~~G~~~~~~~~~vTGKP~~~GGs~gr~ 248 (535)
+.++.-++|+. -||...|...|. . -++.++++-++.-.+..... |....|. .|++
T Consensus 6 ~ip~~ti~RL~~Y~r~l~~l~~~g~-----~------~isS~ela~~~gv~~~qiRk-Dls~fg~-~G~~---------- 62 (212)
T 3keo_A 6 SIPKATAKRLSLYYRIFKRFNTDGI-----E------KASSKQIADALGIDSATVRR-DFSYFGE-LGRR---------- 62 (212)
T ss_dssp CCCHHHHTTHHHHHHHHHHHHHTTC-----C------EECHHHHHHHHTSCHHHHHH-HHHTTGG-GTTT----------
T ss_pred cCCHHHHHHHHHHHHHHHHHHHCCC-----e------EECHHHHHHHHCCCHHHHHH-HHHHHhh-cCCC----------
Confidence 34556666654 466777775421 1 24777887665433222211 1111121 1333
Q ss_pred CchHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEccccHHHHHHHHH--HHCCCeEEEEecCC
Q psy1913 249 SATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQGFGNVGFHAARYF--RRGRAKCLAIVEHD 313 (535)
Q Consensus 249 ~aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L--~e~GakVVaVsD~~ 313 (535)
--||-|-.-++ +..+.+|++ +..+|+|.|.|+.|..+++.+ .+.|.++||+.|.+
T Consensus 63 -g~GY~V~~L~~------~i~~~Lg~~---~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~d 119 (212)
T 3keo_A 63 -GFGYDVKKLMN------FFAEILNDH---STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLD 119 (212)
T ss_dssp -SSSEEHHHHHH------HHHHHTTTT---SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECT
T ss_pred -CCCEEHHHHHH------HHHHHhCCC---CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCC
Confidence 11344433333 444568865 567999999999999999984 45789999988754
No 261
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=90.51 E-value=0.22 Score=48.81 Aligned_cols=47 Identities=17% Similarity=0.209 Sum_probs=38.1
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+ |.+.+.+.+..++.
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~-------------~r~~~~~~~~~~~~ 71 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA-------------DVNEDAAVRVANEI 71 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-------------ESSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHHh
Confidence 578999999984 789999999999999999883 36666676666553
No 262
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=90.46 E-value=0.2 Score=48.12 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=29.7
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 35 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLA 35 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368999999985 899999999999999999884
No 263
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=90.45 E-value=0.16 Score=50.95 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=29.0
Q ss_pred CCcEEEEEccccHHHHHHHHHHH-CCCeEEEEecCC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEHD 313 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~~ 313 (535)
+-.+|+|.|+|++|...++.|.+ .+++|++|+|.+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~ 39 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRT 39 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSC
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCC
Confidence 34799999999999988888876 478999998864
No 264
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=90.33 E-value=0.41 Score=46.80 Aligned_cols=46 Identities=20% Similarity=0.244 Sum_probs=37.2
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+. .+.+.+.+..++
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~-------------r~~~~~~~~~~~ 59 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAV-------------RDTRKGEAAART 59 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEE-------------SCHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEE-------------CCHHHHHHHHHH
Confidence 588999999985 8899999999999999998843 566666555543
No 265
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=90.27 E-value=0.32 Score=50.26 Aligned_cols=73 Identities=11% Similarity=0.073 Sum_probs=48.8
Q ss_pred CCCcEEEEEcccc---HHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--C
Q psy1913 278 MENKTYIVQGFGN---VGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--D 351 (535)
Q Consensus 278 l~g~~VaIQGfGn---VG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--e 351 (535)
++-.+|+|+|+|. +|..-+..+... +++||++. +|.|.+...+..++.|. +.....++ +
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v-----------~d~~~~~a~~~a~~~g~----~~~~~~~~~~~ 74 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGA-----------FDIDPIRGSAFGEQLGV----DSERCYADYLS 74 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEE-----------CCSSHHHHHHHHHHTTC----CGGGBCSSHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEE-----------eCCCHHHHHHHHHHhCC----CcceeeCCHHH
Confidence 4567999999999 998877777665 47888722 44677777777776542 11123333 5
Q ss_pred Cccc------cceEEeeccc
Q psy1913 352 IMFD------KVDILVPAAI 365 (535)
Q Consensus 352 ll~~------~~DILiPaA~ 365 (535)
++.. ++|+++-|+.
T Consensus 75 ll~~~~~~~~~vD~V~i~tp 94 (398)
T 3dty_A 75 MFEQEARRADGIQAVSIATP 94 (398)
T ss_dssp HHHHHTTCTTCCSEEEEESC
T ss_pred HHhcccccCCCCCEEEECCC
Confidence 6643 5888887664
No 266
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=90.15 E-value=0.1 Score=55.79 Aligned_cols=132 Identities=11% Similarity=0.074 Sum_probs=78.6
Q ss_pred CCcEEEEEccccHHHHHHHHHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc-CC---ccc------C-----
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK-GT---IKG------Y----- 342 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~-g~---v~~------~----- 342 (535)
+-.+|+|+|+|.+|+..++.+.+ .+.+|++|+| .|.+...+..++. |. +.. .
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D------------~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~ 89 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSA------------RRLPNTFKAIRTAYGDEENAREATTESAMTRAIE 89 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEEC------------SSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHH
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEe------------CCHHHHHHHHHHhcCCccccccccchhhhhhhhc
Confidence 34799999999999999888765 5889999986 4455555554443 31 000 0
Q ss_pred -CCCcccCC--CCcc-ccceEEeecccccccccccc-ccccc--eEEEecCCCCCCH-HHH---HHHHhCCceeeccccc
Q psy1913 343 -PGTKSAPT--DIMF-DKVDILVPAAIEKVIRKSNA-DKVQA--KIIVEAANGPLTP-AAH---AMLLKKNVLIIPDIFA 411 (535)
Q Consensus 343 -~~a~~i~~--ell~-~~~DILiPaA~~~~It~~na-~~i~A--kiIvEgAN~p~T~-eA~---~iL~~rGI~viPD~la 411 (535)
......++ +++. -++|+++-|+.....+.+.+ .-+++ .++++ |-+++. ++. +.-+++|+.+.+-+-.
T Consensus 90 ~g~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~--nk~l~~~eg~eL~~~A~e~Gvvl~~~~gd 167 (446)
T 3upl_A 90 AGKIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM--NVEADVTIGPYLKAQADKQGVIYSLGAGD 167 (446)
T ss_dssp TTCEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEEECTTS
T ss_pred cCCceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec--CcccCHHHHHHHHHHHHHhCCeeeecCCc
Confidence 01122344 5665 47999999986443333333 22333 45543 545432 233 3446789888654422
Q ss_pred cccCcchhhHhhhh
Q psy1913 412 NAGGVTVSYFEWLK 425 (535)
Q Consensus 412 NaGGVivSy~Ew~q 425 (535)
. -+.+.--++|.+
T Consensus 168 q-p~~~~eLv~~a~ 180 (446)
T 3upl_A 168 E-PSSCMELIEFVS 180 (446)
T ss_dssp H-HHHHHHHHHHHH
T ss_pred c-hHHHHHHHHHHH
Confidence 2 255667778876
No 267
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.09 E-value=0.23 Score=50.50 Aligned_cols=98 Identities=10% Similarity=0.087 Sum_probs=59.1
Q ss_pred CCCCc-EEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCC------CcccC
Q psy1913 277 CMENK-TYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPG------TKSAP 349 (535)
Q Consensus 277 ~l~g~-~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~------a~~i~ 349 (535)
++..+ +|+|.|.|++|..+|..|.+.|..|+. .|.+.+.+....+........++ ....+
T Consensus 11 ~~m~M~kI~iIG~G~mG~~la~~L~~~G~~V~~-------------~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 77 (366)
T 1evy_A 11 ELLYLNKAVVFGSGAFGTALAMVLSKKCREVCV-------------WHMNEEEVRLVNEKRENVLFLKGVQLASNITFTS 77 (366)
T ss_dssp CCCCEEEEEEECCSHHHHHHHHHHTTTEEEEEE-------------ECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEES
T ss_pred HhhccCeEEEECCCHHHHHHHHHHHhCCCEEEE-------------EECCHHHHHHHHHcCcccccccccccccceeeeC
Confidence 34345 899999999999999999999988876 23555666555544322211122 11112
Q ss_pred C--CCccccceEEeecccccccccccc--------cccc--ceEEEecCCCC
Q psy1913 350 T--DIMFDKVDILVPAAIEKVIRKSNA--------DKVQ--AKIIVEAANGP 389 (535)
Q Consensus 350 ~--ell~~~~DILiPaA~~~~It~~na--------~~i~--AkiIvEgAN~p 389 (535)
. +.+ .+||++|-|.....+. +-+ +.++ -.+|+.-.|+-
T Consensus 78 ~~~~~~-~~aDvVilav~~~~~~-~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 78 DVEKAY-NGAEIILFVIPTQFLR-GFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp CHHHHH-TTCSSEEECCCHHHHH-HHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred CHHHHH-cCCCEEEECCChHHHH-HHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 2 222 3799999998754332 222 2233 35788888864
No 268
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.01 E-value=0.47 Score=48.35 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=29.6
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|.|.|.|.||..+++++...|++|+++.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~ 218 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIS 218 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 58999999999999999999999999998854
No 269
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=89.92 E-value=0.21 Score=49.05 Aligned_cols=47 Identities=19% Similarity=0.220 Sum_probs=37.2
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+++|+++.|.| .|.+|+++|+.|++.|++|+.+ |.+.+.+.+..++.
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~-------------~r~~~~~~~~~~~~ 73 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCA-------------DIDGDAADAAATKI 73 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEE-------------ESSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHHc
Confidence 47899999998 5789999999999999999883 36666666655543
No 270
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=89.88 E-value=0.34 Score=46.35 Aligned_cols=96 Identities=18% Similarity=0.223 Sum_probs=63.5
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~D 358 (535)
++|+|.|+|++|+..++.|.+.|..|++|.|.+. + .+ . ..+. +++..++|
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-----~---~~--~------------------~~~~~~~l~~~~~D 52 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-----E---HE--K------------------MVRGIDEFLQREMD 52 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-----C---CT--T------------------EESSHHHHTTSCCS
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-----c---hh--h------------------hcCCHHHHhcCCCC
Confidence 3799999999999999999999999999888652 1 10 0 1222 44446899
Q ss_pred EEeeccccccccccccccc---cceEEEecCCCCCCHHH----HHHHHhCCcee
Q psy1913 359 ILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLTPAA----HAMLLKKNVLI 405 (535)
Q Consensus 359 ILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T~eA----~~iL~~rGI~v 405 (535)
+++-|+... .+.+.+... ...+|+|..-.+..+++ .+..+++|+.+
T Consensus 53 vVv~~~~~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~ 105 (236)
T 2dc1_A 53 VAVEAASQQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRV 105 (236)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCE
T ss_pred EEEECCCHH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeE
Confidence 999998754 455554332 24677775433334544 33456778764
No 271
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.75 E-value=0.47 Score=46.77 Aligned_cols=45 Identities=22% Similarity=0.210 Sum_probs=38.2
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~ 334 (535)
+|+||++.|.|. +..|+.+|+.|++.|++|+. +|.+.+.+.+..+
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi-------------~~~~~~~~~~~~~ 51 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVIL-------------NDIRATLLAESVD 51 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-------------CCSCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-------------EECCHHHHHHHHH
Confidence 479999999985 67999999999999999998 6788887766554
No 272
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.72 E-value=0.28 Score=52.18 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=32.2
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEec
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD 311 (535)
+++|++|.|.|.|.||...+++|.+.|++|+.|+.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~ 43 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNAL 43 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcC
Confidence 47899999999999999999999999999988763
No 273
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=89.71 E-value=1 Score=46.50 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=28.7
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
.+|+|-|||-+|+.+.+.|.+. ...||+|.|.
T Consensus 3 ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~ 35 (342)
T 2ep7_A 3 IKVGINGFGRIGRSFFRASWGREEIEIVAINDL 35 (342)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 4899999999999999999876 6899999873
No 274
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=89.68 E-value=0.57 Score=48.85 Aligned_cols=90 Identities=9% Similarity=0.084 Sum_probs=56.3
Q ss_pred CCCcEEEEEcccc---HHHHHHHHHHHCC-CeEEE-EecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--
Q psy1913 278 MENKTYIVQGFGN---VGFHAARYFRRGR-AKCLA-IVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT-- 350 (535)
Q Consensus 278 l~g~~VaIQGfGn---VG~~~A~~L~e~G-akVVa-VsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~-- 350 (535)
++-.+|+|+|+|. +|..-+..+...+ ++||+ |+ |.|.+...+..++.|- +....+++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~------------d~~~~~a~~~a~~~g~----~~~~~~~~~~ 98 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGAL------------SSTPEKAEASGRELGL----DPSRVYSDFK 98 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEEC------------CSSHHHHHHHHHHHTC----CGGGBCSCHH
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEe------------CCCHHHHHHHHHHcCC----CcccccCCHH
Confidence 4567999999999 9987777776654 78886 54 4677777777776542 11123344
Q ss_pred CCccc------cceEEeeccccccccccccccc-c--ceEEEe
Q psy1913 351 DIMFD------KVDILVPAAIEKVIRKSNADKV-Q--AKIIVE 384 (535)
Q Consensus 351 ell~~------~~DILiPaA~~~~It~~na~~i-~--AkiIvE 384 (535)
+++.. ++|+++-|+.. ..+.+.+... + ..++||
T Consensus 99 ~ll~~~~~~~~~vD~V~I~tp~-~~H~~~~~~al~aGkhVl~E 140 (417)
T 3v5n_A 99 EMAIREAKLKNGIEAVAIVTPN-HVHYAAAKEFLKRGIHVICD 140 (417)
T ss_dssp HHHHHHHHCTTCCSEEEECSCT-TSHHHHHHHHHTTTCEEEEE
T ss_pred HHHhcccccCCCCcEEEECCCc-HHHHHHHHHHHhCCCeEEEE
Confidence 56653 58988877653 3444433322 2 357777
No 275
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=89.67 E-value=0.23 Score=48.36 Aligned_cols=47 Identities=19% Similarity=0.175 Sum_probs=37.3
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~-------------~r~~~~~~~~~~~~ 71 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLH-------------GTREDKLKEIAADL 71 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHHh
Confidence 468999999984 789999999999999999873 35566666665543
No 276
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.65 E-value=0.17 Score=49.75 Aligned_cols=95 Identities=14% Similarity=0.080 Sum_probs=57.8
Q ss_pred cEEEEEccccHHHHHHHHHHHC-----C-CeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC-cccCCCC------cc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-----R-AKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT-IKGYPGT------KS 347 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-----G-akVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~-v~~~~~a------~~ 347 (535)
++|+|.|.|++|..+|..|.+. | ..|+.+. - .+.+..+.++.|- +...++. ..
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~-------------r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 74 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA-------------R-GAHLEAIRAAGGLRVVTPSRDFLARPTCV 74 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC-------------C-HHHHHHHHHHTSEEEECSSCEEEECCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE-------------c-HHHHHHHHhcCCeEEEeCCCCeEEecceE
Confidence 5899999999999999999998 8 8887621 2 2334444432332 2111111 01
Q ss_pred cCC-CCccccceEEeeccccccccccccccc----c-ceEEEecCCCCCC
Q psy1913 348 APT-DIMFDKVDILVPAAIEKVIRKSNADKV----Q-AKIIVEAANGPLT 391 (535)
Q Consensus 348 i~~-ell~~~~DILiPaA~~~~It~~na~~i----~-AkiIvEgAN~p~T 391 (535)
.++ +. ..+||++|-|.....+ .+-++.+ + -.+|+--.|+..+
T Consensus 75 ~~~~~~-~~~~D~vil~vk~~~~-~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 75 TDNPAE-VGTVDYILFCTKDYDM-ERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp ESCHHH-HCCEEEEEECCSSSCH-HHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred ecCccc-cCCCCEEEEecCcccH-HHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 122 22 2479999999876654 3333333 2 3578888998744
No 277
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.61 E-value=0.31 Score=48.71 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=48.6
Q ss_pred CCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCCcccCC--CCc
Q psy1913 279 ENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGTKSAPT--DIM 353 (535)
Q Consensus 279 ~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a~~i~~--ell 353 (535)
.|.+|.|.|. |.+|..+++++...|++|+++. .+.+.+....++.|. +.++........ ++.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~-------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIA-------------GGAEKCRFLVEELGFDGAIDYKNEDLAAGLKREC 215 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-------------SSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe-------------CCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhc
Confidence 5899999998 9999999999999999999843 556666555344442 111111111000 111
Q ss_pred cccceEEeecccc
Q psy1913 354 FDKVDILVPAAIE 366 (535)
Q Consensus 354 ~~~~DILiPaA~~ 366 (535)
...+|+++-|+..
T Consensus 216 ~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 216 PKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEEEESSCH
T ss_pred CCCceEEEECCCc
Confidence 2368999988864
No 278
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=89.59 E-value=0.28 Score=48.04 Aligned_cols=46 Identities=11% Similarity=0.247 Sum_probs=37.4
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
++|+++.|.| .|.+|+++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~-------------~r~~~~~~~~~~~~ 49 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVL-------------DKSAERLRELEVAH 49 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHHT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE-------------eCCHHHHHHHHHHc
Confidence 6799999998 5789999999999999999983 35667776665554
No 279
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=89.56 E-value=0.56 Score=47.45 Aligned_cols=104 Identities=14% Similarity=0.180 Sum_probs=60.8
Q ss_pred cEEEEEccccHHH-HHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-c
Q psy1913 281 KTYIVQGFGNVGF-HAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-D 355 (535)
Q Consensus 281 ~~VaIQGfGnVG~-~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~ 355 (535)
.+|+|.|+|.+|. ..+..|.+. +++|++|+|.+ .. +++ .++.+ .++...+++ +++. .
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~------~~-----~~~---a~~~~----~~~~~~~~~~~~ll~~~ 64 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH------VN-----EKA---AAPFK----EKGVNFTADLNELLTDP 64 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT------CC-----HHH---HHHHH----TTTCEEESCTHHHHSCT
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC------HH-----HHH---HHhhC----CCCCeEECCHHHHhcCC
Confidence 5899999999998 567767654 89999999875 22 222 22211 123333444 5665 3
Q ss_pred cceEEeeccccccccccccccc-c--ceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 356 KVDILVPAAIEKVIRKSNADKV-Q--AKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~i-~--AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
++|+++-|+.. ..+.+.+... + ..++|| -|+ | .+++++ .+++|+.+.
T Consensus 65 ~~D~V~i~tp~-~~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~ 120 (349)
T 3i23_A 65 EIELITICTPA-HTHYDLAKQAILAGKSVIVE---KPFCDTLEHAEELFALGQEKGVVVM 120 (349)
T ss_dssp TCCEEEECSCG-GGHHHHHHHHHHTTCEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEeCCc-HHHHHHHHHHHHcCCEEEEE---CCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 68999888754 3444443322 2 356775 342 2 344443 456676554
No 280
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=89.12 E-value=0.066 Score=50.70 Aligned_cols=32 Identities=9% Similarity=0.043 Sum_probs=28.6
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
.+.+++|.|.|+|++|..+|+.|.+.|.+|+.
T Consensus 16 ~~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~ 47 (201)
T 2yjz_A 16 SEKQGVVCIFGTGDFGKSLGLKMLQCGYSVVF 47 (201)
Confidence 35778999999999999999999999988765
No 281
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.50 E-value=0.81 Score=48.66 Aligned_cols=29 Identities=28% Similarity=0.260 Sum_probs=26.9
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
=++|+|.|.|.+|..+|..|.+.|..|+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l 65 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVA 65 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEE
Confidence 35899999999999999999999999887
No 282
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=89.45 E-value=0.28 Score=46.49 Aligned_cols=48 Identities=19% Similarity=0.188 Sum_probs=38.4
Q ss_pred CCCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 276 PCMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 276 ~~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
.++++++|.|.| .|.+|+++|+.|++.|++|+.+. .+.+.+.+..++.
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~-------------r~~~~~~~~~~~~ 58 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISG-------------SNEEKLKSLGNAL 58 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-------------SCHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEc-------------CCHHHHHHHHHHh
Confidence 357899999999 58899999999999999998843 5666666665543
No 283
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=89.44 E-value=0.42 Score=47.07 Aligned_cols=46 Identities=24% Similarity=0.288 Sum_probs=37.9
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
+|+||++.|.|- +..|+.+|+.|++.|++|+. +|.+.+.+.+..++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~-------------~~~~~~~~~~~~~~ 50 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVA-------------VELLEDRLNQIVQE 50 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-------------EESCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEE-------------EECCHHHHHHHHHH
Confidence 579999999985 67999999999999999988 55777777665543
No 284
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.40 E-value=0.29 Score=43.62 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=26.5
Q ss_pred EEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 282 TYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 282 ~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
.|+|+|.|.+|..+|..|++.|.+|+. .|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v-~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHL-FDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEE-ECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEE-EEC
Confidence 599999999999999999999999765 553
No 285
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.28 E-value=0.35 Score=49.79 Aligned_cols=96 Identities=13% Similarity=0.061 Sum_probs=60.9
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcc-----cCCCCc-
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKS-----APTDIM- 353 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~-----i~~ell- 353 (535)
.++|+|.|.|++|..+|..|.+.|..|+. .|.|.+.+.+..+.......+|+... .+.++-
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l-------------~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~e 95 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRL-------------WSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKA 95 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEE-------------ECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEE-------------EeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHH
Confidence 46899999999999999999999998876 33666666666554322222232211 111221
Q ss_pred -cccceEEeecccccccccccc----cccc-ceEEEecCCCC
Q psy1913 354 -FDKVDILVPAAIEKVIRKSNA----DKVQ-AKIIVEAANGP 389 (535)
Q Consensus 354 -~~~~DILiPaA~~~~It~~na----~~i~-AkiIvEgAN~p 389 (535)
-.+||++|-|.....+. +.+ +.++ -.+|+-.+|+-
T Consensus 96 a~~~aDvVilaVp~~~~~-~vl~~i~~~l~~~~ivvs~~kGi 136 (356)
T 3k96_A 96 SLEGVTDILIVVPSFAFH-EVITRMKPLIDAKTRIAWGTKGL 136 (356)
T ss_dssp HHTTCCEEEECCCHHHHH-HHHHHHGGGCCTTCEEEECCCSC
T ss_pred HHhcCCEEEECCCHHHHH-HHHHHHHHhcCCCCEEEEEeCCC
Confidence 24799999997755332 222 2332 35788888875
No 286
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=89.15 E-value=2.1 Score=43.78 Aligned_cols=31 Identities=29% Similarity=0.404 Sum_probs=28.0
Q ss_pred cEEEEEccccHHHHHHHHHHH-CCCeEEEEec
Q psy1913 281 KTYIVQGFGNVGFHAARYFRR-GRAKCLAIVE 311 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD 311 (535)
.+|+|.|||.+|+.+++.|.+ .+..||+|.|
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d 35 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIND 35 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecC
Confidence 589999999999999999876 5799999987
No 287
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.15 E-value=1 Score=44.20 Aligned_cols=48 Identities=19% Similarity=0.191 Sum_probs=37.1
Q ss_pred chHHHHHHHHHHHHhcHHHHHHhCCCCCCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEE
Q psy1913 250 ATGRGVFTAAEILVNNEEYMCEIGLEPCMENKTYIVQG-FGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 250 aTg~GV~~~i~~~l~~~~~~~~~g~~~~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVa 308 (535)
-++.|....++.. ++. +++|+++.|.| .|.+|+++++.|.+.|++|+.
T Consensus 100 Td~~g~~~~l~~~---------~~~--~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i 148 (287)
T 1lu9_A 100 TTAAAGVALVVKA---------AGG--SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVL 148 (287)
T ss_dssp HHHHHHHHHHHHH---------TTS--CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHHHHHh---------hcc--CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEE
Confidence 3567776666521 143 46899999999 999999999999999999554
No 288
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=89.14 E-value=0.2 Score=48.78 Aligned_cols=34 Identities=29% Similarity=0.507 Sum_probs=30.1
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |.+|+++|+.|++.|++|+.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 42 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLAD 42 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 578999999995 8899999999999999988743
No 289
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.12 E-value=0.26 Score=49.83 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=31.4
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
.|+.++|.|.|.|-+|..+|+.|...|..=+.|.|.
T Consensus 33 kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~ 68 (292)
T 3h8v_A 33 KIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDY 68 (292)
T ss_dssp GGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECC
Confidence 367899999999999999999999999866666664
No 290
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.12 E-value=0.35 Score=48.71 Aligned_cols=92 Identities=17% Similarity=0.186 Sum_probs=56.8
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCc------ccCC-CC
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTK------SAPT-DI 352 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~------~i~~-el 352 (535)
.++|+|.|.|++|..+|..|.+.|..|+.+. -+ +.+.+.. +.|.....++.. ..+. +-
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~-------------r~-~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 67 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLA-------------RG-ATLQALQ-TAGLRLTEDGATHTLPVRATHDAAA 67 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEEC-------------CH-HHHHHHH-HTCEEEEETTEEEEECCEEESCHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEE-------------Ch-HHHHHHH-HCCCEEecCCCeEEEeeeEECCHHH
Confidence 4689999999999999999999999887732 22 2333333 333211112111 1122 11
Q ss_pred ccccceEEeecccccccccccccccc-----ceEEEecCCC
Q psy1913 353 MFDKVDILVPAAIEKVIRKSNADKVQ-----AKIIVEAANG 388 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~~na~~i~-----AkiIvEgAN~ 388 (535)
+ .+||++|-|.....+. +-+..+. -.+|+-..||
T Consensus 68 ~-~~~D~Vilavk~~~~~-~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 68 L-GEQDVVIVAVKAPALE-SVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp H-CCCSEEEECCCHHHHH-HHHGGGSSSCCTTCEEEECCSS
T ss_pred c-CCCCEEEEeCCchhHH-HHHHHHHhhCCCCCEEEEECCC
Confidence 2 5799999998765433 3344442 3688999999
No 291
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=89.11 E-value=0.34 Score=47.11 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=29.7
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 39 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVIC 39 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999999884
No 292
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=89.09 E-value=0.29 Score=46.72 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=29.6
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIA 37 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999998874
No 293
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.99 E-value=0.49 Score=45.36 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=30.0
Q ss_pred CCCCcEEEEEcc-c-cHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-G-NVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-G-nVG~~~A~~L~e~GakVVaV 309 (535)
.++++++.|.|. | .+|+++|+.|.+.|++|+.+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~ 53 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVIS 53 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEe
Confidence 478999999998 8 59999999999999999884
No 294
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=88.83 E-value=0.38 Score=45.91 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=28.9
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
++++++.|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~ 35 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVAC 35 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 5789999998 4889999999999999999884
No 295
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=88.78 E-value=0.36 Score=50.75 Aligned_cols=115 Identities=18% Similarity=0.219 Sum_probs=68.8
Q ss_pred cEEEEEcc-ccHHHHHHHHHHHC-C-CeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC----ccc----------CC
Q psy1913 281 KTYIVQGF-GNVGFHAARYFRRG-R-AKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT----IKG----------YP 343 (535)
Q Consensus 281 ~~VaIQGf-GnVG~~~A~~L~e~-G-akVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~----v~~----------~~ 343 (535)
++|+|.|+ |.||+.+++.+.+. + .+|++++ ++.+++.+.+..++.+- +.+ ++
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~-----------ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~ 73 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALT-----------ANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALA 73 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEE-----------ESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTT
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEE-----------cCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhc
Confidence 78999999 99999999999885 3 7899885 44677777776666541 011 00
Q ss_pred C--CcccCC-----CCccccceEEeeccccccccccc-cccccc-eEEEecCCCCCCH----HHHHHHHhCCceeecc
Q psy1913 344 G--TKSAPT-----DIMFDKVDILVPAAIEKVIRKSN-ADKVQA-KIIVEAANGPLTP----AAHAMLLKKNVLIIPD 408 (535)
Q Consensus 344 ~--a~~i~~-----ell~~~~DILiPaA~~~~It~~n-a~~i~A-kiIvEgAN~p~T~----eA~~iL~~rGI~viPD 408 (535)
+ .+.+.. +++..++|+++.|..+. ..-+. ...+++ |-|+ -||-.+.. +..+..+++|+.++|-
T Consensus 74 ~~~~~v~~g~~~~~el~~~~iDvVV~ai~G~-aGl~ptlaAi~aGK~Vv-lANKE~lv~~G~~l~~~A~~~gv~liPV 149 (388)
T 1r0k_A 74 GSSVEAAAGADALVEAAMMGADWTMAAIIGC-AGLKATLAAIRKGKTVA-LANKESLVSAGGLMIDAVREHGTTLLPV 149 (388)
T ss_dssp TCSSEEEESHHHHHHHHTSCCSEEEECCCSG-GGHHHHHHHHHTTSEEE-ECCSHHHHTTHHHHHHHHHHHTCEEEEC
T ss_pred cCCcEEEeCccHHHHHHcCCCCEEEEeCCCH-HHHHHHHHHHHCCCEEE-EeCcHHHHhhHHHHHHHHHHcCCEEEEe
Confidence 0 011111 24444589999997542 12222 223333 3333 35666433 3334456779999885
No 296
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.77 E-value=0.43 Score=47.28 Aligned_cols=104 Identities=10% Similarity=0.035 Sum_probs=62.8
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCC--CHHHHHHHHHHcCCcccCCCC-----cccC--C-
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEI--NYKDLHTYKITKGTIKGYPGT-----KSAP--T- 350 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dL--Di~~L~~~~~~~g~v~~~~~a-----~~i~--~- 350 (535)
++|+|.|.|++|..+|..|.+.|..|+.+ |. +.+.+....+. +....+ +. ...+ .
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~-------------~r~~~~~~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~ 65 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIW-------------GTEFDTEILKSISAG-REHPRL-GVKLNGVEIFWPEQL 65 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEE-------------CCGGGHHHHHHHHTT-CCBTTT-TBCCCSEEEECGGGH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEE-------------EccCCHHHHHHHHHh-CcCccc-CccccceEEecHHhH
Confidence 37999999999999999999999988772 23 44555544432 211111 11 1112 1
Q ss_pred -CCccccceEEeeccccccccc---ccccccc-ceEEEecCCCC------CCHHHHHHHHhC
Q psy1913 351 -DIMFDKVDILVPAAIEKVIRK---SNADKVQ-AKIIVEAANGP------LTPAAHAMLLKK 401 (535)
Q Consensus 351 -ell~~~~DILiPaA~~~~It~---~na~~i~-AkiIvEgAN~p------~T~eA~~iL~~r 401 (535)
+. -.+||++|-|.....+.. +-++ ++ -++|+.-.|+- ......++|.+.
T Consensus 66 ~~~-~~~~D~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~ 125 (335)
T 1txg_A 66 EKC-LENAEVVLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLK 125 (335)
T ss_dssp HHH-HTTCSEEEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTS
T ss_pred HHH-HhcCCEEEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHh
Confidence 21 247999999987654322 1223 43 36888888875 334555666553
No 297
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.70 E-value=0.81 Score=49.07 Aligned_cols=28 Identities=18% Similarity=0.204 Sum_probs=26.9
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
++|+|+|.|.+|..+|..|++.|..|+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 6899999999999999999999999988
No 298
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=88.63 E-value=0.89 Score=44.72 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=28.7
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVa 308 (535)
+|+||++.|.|- +..|+.+|+.|++.|++|+.
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi 38 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVC 38 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEE
Confidence 589999999985 67999999999999999876
No 299
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=88.61 E-value=0.26 Score=48.00 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=29.5
Q ss_pred CCCCcEEEEEcc-cc--HHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GN--VGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-Gn--VG~~~A~~L~e~GakVVaVs 310 (535)
.+++++|.|.|. |+ +|+++|+.|.+.|++|+.+.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~ 59 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTY 59 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEee
Confidence 478999999995 55 99999999999999988754
No 300
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=88.59 E-value=0.72 Score=43.43 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=29.9
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
+++++++.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 37 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITG 37 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 46889999998 58999999999999999998843
No 301
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.51 E-value=0.55 Score=48.18 Aligned_cols=71 Identities=21% Similarity=0.233 Sum_probs=47.9
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc-CC--CCc-
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA-PT--DIM- 353 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i-~~--ell- 353 (535)
+++++|.|.|.|.+|..+++.+...|++|++ .|.+.+.+....+..+.. ...+ .. ++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v-------------~dr~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~ 226 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQI-------------FDINVERLSYLETLFGSR-----VELLYSNSAEIET 226 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEE-------------EESCHHHHHHHHHHHGGG-----SEEEECCHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEE-------------EeCCHHHHHHHHHhhCce-----eEeeeCCHHHHHH
Confidence 5678999999999999999999999998887 446667766655432210 0001 11 111
Q ss_pred -cccceEEeecccc
Q psy1913 354 -FDKVDILVPAAIE 366 (535)
Q Consensus 354 -~~~~DILiPaA~~ 366 (535)
-..+|++|-|+..
T Consensus 227 ~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 227 AVAEADLLIGAVLV 240 (361)
T ss_dssp HHHTCSEEEECCCC
T ss_pred HHcCCCEEEECCCc
Confidence 1268999988763
No 302
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.48 E-value=0.38 Score=46.38 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=30.5
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
++++|.|.|.|-+|+++++.|.+.|++|++++-.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999999999999999999999997643
No 303
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.40 E-value=0.92 Score=45.42 Aligned_cols=97 Identities=12% Similarity=0.182 Sum_probs=59.5
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCc------ccCC-
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTK------SAPT- 350 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~------~i~~- 350 (535)
...++|+|.|.|++|..+|..|.+.|..|+.+ .+.+.+....+..-.+. .++.. ..++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~--------------~~~~~~~~i~~~g~~~~-~~~~~~~~~~~~~~~~ 81 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI--------------ARPQHVQAIEATGLRLE-TQSFDEQVKVSASSDP 81 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE--------------CCHHHHHHHHHHCEEEE-CSSCEEEECCEEESCG
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE--------------EcHhHHHHHHhCCeEEE-cCCCcEEEeeeeeCCH
Confidence 35689999999999999999999999988773 23344444443321121 22221 1122
Q ss_pred CCccccceEEeecccccccccccccccc-----ceEEEecCCCCCC
Q psy1913 351 DIMFDKVDILVPAAIEKVIRKSNADKVQ-----AKIIVEAANGPLT 391 (535)
Q Consensus 351 ell~~~~DILiPaA~~~~It~~na~~i~-----AkiIvEgAN~p~T 391 (535)
+.. .+||++|-|.....+ .+-+..+. -.+|+-..||--.
T Consensus 82 ~~~-~~~D~vilavk~~~~-~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 82 SAV-QGADLVLFCVKSTDT-QSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp GGG-TTCSEEEECCCGGGH-HHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred HHc-CCCCEEEEEcccccH-HHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 222 489999999876644 33333332 2578888998744
No 304
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=88.40 E-value=0.23 Score=47.35 Aligned_cols=34 Identities=12% Similarity=0.217 Sum_probs=30.2
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++|.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 43 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLD 43 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 46899999998 58999999999999999998854
No 305
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=88.15 E-value=2.7 Score=43.04 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=28.2
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
.+|+|.|||.+|+.+.|+|.++ ...||+|.|.
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 4899999999999999999875 5799999874
No 306
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=88.14 E-value=0.29 Score=47.83 Aligned_cols=46 Identities=17% Similarity=0.054 Sum_probs=35.5
Q ss_pred CCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 278 MENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 278 l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+.++++.|.|. |-+|+++|+.|.+.|++|+.+ +.+.+.+.+..++.
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~-------------~r~~~~~~~~~~~~ 72 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALA-------------GRRLDALQETAAEI 72 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-------------ECCHHHHHHHHHHh
Confidence 57889999884 789999999999999999883 36666776666553
No 307
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=88.08 E-value=0.47 Score=48.87 Aligned_cols=31 Identities=26% Similarity=0.102 Sum_probs=28.5
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC-eEEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA-KCLAI 309 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaV 309 (535)
.|.+|+|.|.|.||..+++++...|+ +|+++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 216 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVG 216 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 58999999999999999999998999 89984
No 308
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=87.85 E-value=0.78 Score=44.37 Aligned_cols=34 Identities=12% Similarity=0.244 Sum_probs=28.0
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
.+++++|.|.|. |.+|+++|+.|++.|++|+.++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~ 43 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTC 43 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEe
Confidence 357899999995 8899999999999999999843
No 309
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=87.77 E-value=0.18 Score=48.34 Aligned_cols=34 Identities=21% Similarity=0.406 Sum_probs=29.9
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 38 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLD 38 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 368999999995 8899999999999999988754
No 310
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.70 E-value=0.63 Score=46.39 Aligned_cols=75 Identities=13% Similarity=0.061 Sum_probs=47.8
Q ss_pred CCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCC-CcccCC--CC
Q psy1913 279 ENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPG-TKSAPT--DI 352 (535)
Q Consensus 279 ~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~-a~~i~~--el 352 (535)
.|++|.|.|. |.+|..+++++...|++|+++ +.+.+.+... ++.|. +.++.. ...... ++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~-------------~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~ 210 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA-------------AGSDEKIAYL-KQIGFDAAFNYKTVNSLEEALKKA 210 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEE-------------ESSHHHHHHH-HHTTCSEEEETTSCSCHHHHHHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHH-HhcCCcEEEecCCHHHHHHHHHHH
Confidence 5899999997 999999999999999999984 3555555544 34332 111211 100000 11
Q ss_pred ccccceEEeeccccc
Q psy1913 353 MFDKVDILVPAAIEK 367 (535)
Q Consensus 353 l~~~~DILiPaA~~~ 367 (535)
....+|++|-|+...
T Consensus 211 ~~~~~d~vi~~~g~~ 225 (333)
T 1v3u_A 211 SPDGYDCYFDNVGGE 225 (333)
T ss_dssp CTTCEEEEEESSCHH
T ss_pred hCCCCeEEEECCChH
Confidence 123689999998653
No 311
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.69 E-value=0.51 Score=44.49 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=26.7
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
.+..++|+|.|.|++|..+|+.|.+.|.+|+.
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~ 47 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGHEVTY 47 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 35788999999999999999999999998876
No 312
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.49 E-value=1.2 Score=45.80 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=28.6
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC-eEEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA-KCLAI 309 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaV 309 (535)
.|.+|+|.|.|.||..+++++...|+ +|+++
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 244 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILS 244 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 58999999999999999999999999 88883
No 313
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=87.37 E-value=0.58 Score=46.84 Aligned_cols=31 Identities=19% Similarity=0.160 Sum_probs=28.7
Q ss_pred CCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 279 ENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 279 ~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
.|.+|.|.|. |.+|..+++++...|++|+++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~ 186 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGS 186 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 5899999997 999999999999999999984
No 314
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=87.07 E-value=0.19 Score=50.85 Aligned_cols=103 Identities=16% Similarity=0.181 Sum_probs=61.2
Q ss_pred cEEEEEccccHHHH-HHH-HHHH-CCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-
Q psy1913 281 KTYIVQGFGNVGFH-AAR-YFRR-GRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF- 354 (535)
Q Consensus 281 ~~VaIQGfGnVG~~-~A~-~L~e-~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~- 354 (535)
.+|+|.|+|++|.. .+. .|.. .+++|++|+|.+ ++- . +. ...+++...+++ +++.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~-----~~~-------~-~~------~~~~~~~~~~~~~~~ll~~ 63 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRH-----AKP-------E-EQ------APIYSHIHFTSDLDEVLND 63 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSS-----CCG-------G-GG------SGGGTTCEEESCTHHHHTC
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCC-----HhH-------H-HH------HHhcCCCceECCHHHHhcC
Confidence 58999999999984 566 4343 589999998864 111 1 11 112234444444 5665
Q ss_pred ccceEEeeccccccccccccccc---cceEEEecCCCCC--C-HHHHHH---HHhCCceee
Q psy1913 355 DKVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPL--T-PAAHAM---LLKKNVLII 406 (535)
Q Consensus 355 ~~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~--T-~eA~~i---L~~rGI~vi 406 (535)
.++|+++-|+. +..+.+.+... ...++|| -|+ | .+++++ .+++|+.+.
T Consensus 64 ~~~D~V~i~tp-~~~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~ 120 (345)
T 3f4l_A 64 PDVKLVVVCTH-ADSHFEYAKRALEAGKNVLVE---KPFTPTLAQAKELFALAKSKGLTVT 120 (345)
T ss_dssp TTEEEEEECSC-GGGHHHHHHHHHHTTCEEEEC---SSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEcCC-hHHHHHHHHHHHHcCCcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 47999998884 34454444332 2478888 443 2 344443 456777654
No 315
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=86.83 E-value=1.4 Score=44.06 Aligned_cols=71 Identities=14% Similarity=0.032 Sum_probs=43.5
Q ss_pred cEEEEEccccHHHHHHHHHHHCCC--eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCC-CCccc-CC-CCccc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRA--KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYP-GTKSA-PT-DIMFD 355 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~-~a~~i-~~-ell~~ 355 (535)
++|+|.|.|.||..+|..|...|. .|+. -|+|.+.+............|. ..+.. +. +-+ .
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L-------------~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~-~ 66 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVL-------------VDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSEL-A 66 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEE-------------ECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGG-T
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEE-------------EeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHh-C
Confidence 479999999999999999999997 7776 4466665543322211111111 11111 12 222 4
Q ss_pred cceEEeeccc
Q psy1913 356 KVDILVPAAI 365 (535)
Q Consensus 356 ~~DILiPaA~ 365 (535)
+||++|-|+.
T Consensus 67 ~aDvVIi~~~ 76 (304)
T 2v6b_A 67 DAQVVILTAG 76 (304)
T ss_dssp TCSEEEECC-
T ss_pred CCCEEEEcCC
Confidence 8999999984
No 316
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=86.82 E-value=0.9 Score=45.21 Aligned_cols=48 Identities=21% Similarity=0.264 Sum_probs=40.4
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcC
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKG 337 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g 337 (535)
-|+||++.|.|. +..|+.+|+.|++.|++|+. +|.+.+.|.+..++.+
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i-------------~~r~~~~l~~~~~~~g 74 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFI-------------TGRRKDVLDAAIAEIG 74 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-------------EESCHHHHHHHHHHHC
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEE-------------EECCHHHHHHHHHHcC
Confidence 489999999995 56999999999999999988 5577888888776654
No 317
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=86.82 E-value=0.41 Score=48.13 Aligned_cols=101 Identities=18% Similarity=0.232 Sum_probs=55.1
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCC-------CeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCC------
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGR-------AKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGT------ 345 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~G-------akVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a------ 345 (535)
..++|+|.|.|++|..+|..|.+.| ..|+. .|.+-.. .+ -. .+....+........++.
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~-~~r~~~~---~~--~~--~~~~l~~~~~~~~~~~~~~~~~~~ 78 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTM-WVFEEDI---GG--KK--LTEIINTQHENVKYLPGHKLPPNV 78 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEE-ECCCCBS---SS--SB--HHHHHHHHSCCTTTSTTCCCCTTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEE-EEcChhh---hh--hH--HHHHHHhcCcccccCCcccCccCe
Confidence 4469999999999999999999988 67654 3322110 00 00 222222222111111111
Q ss_pred cccCC--CCccccceEEeecccccccccccccc----cc-ceEEEecCCCC
Q psy1913 346 KSAPT--DIMFDKVDILVPAAIEKVIRKSNADK----VQ-AKIIVEAANGP 389 (535)
Q Consensus 346 ~~i~~--ell~~~~DILiPaA~~~~It~~na~~----i~-AkiIvEgAN~p 389 (535)
...+. +.+ .+||++|-|.....+. +-+.. ++ -.+|+.-.|+-
T Consensus 79 ~~~~~~~~~~-~~aD~Vilav~~~~~~-~v~~~i~~~l~~~~ivv~~~~Gi 127 (354)
T 1x0v_A 79 VAVPDVVQAA-EDADILIFVVPHQFIG-KICDQLKGHLKANATGISLIKGV 127 (354)
T ss_dssp EEESSHHHHH-TTCSEEEECCCGGGHH-HHHHHHTTCSCTTCEEEECCCCB
T ss_pred EEEcCHHHHH-cCCCEEEEeCCHHHHH-HHHHHHHhhCCCCCEEEEECCcc
Confidence 11121 222 4799999998764432 22222 32 35888888874
No 318
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=86.79 E-value=0.41 Score=49.99 Aligned_cols=116 Identities=16% Similarity=0.091 Sum_probs=64.2
Q ss_pred cEEEEEccccHHHHHHHHHHHCCC---eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcC-----CcccCCCCcccCC--
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRA---KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKG-----TIKGYPGTKSAPT-- 350 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~Ga---kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g-----~v~~~~~a~~i~~-- 350 (535)
++|+|.|.|.+|+.+++.|.+.|. .|+. +| -+.+.+.+..++.+ .+.... . .+++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v-~~------------r~~~~~~~la~~l~~~~~~~~~~~~-~-D~~d~~ 66 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITL-AS------------RTLSKCQEIAQSIKAKGYGEIDITT-V-DADSIE 66 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEE-EE------------SCHHHHHHHHHHHHHTTCCCCEEEE-C-CTTCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEE-EE------------CCHHHHHHHHHHhhhhcCCceEEEE-e-cCCCHH
Confidence 489999999999999999999984 5554 33 55666655554321 111000 0 0111
Q ss_pred ---CCcc-ccceEEeeccccccccccccc---cccceEEEecCCC--CC-C-------HHHHHHHHhCCceeeccccccc
Q psy1913 351 ---DIMF-DKVDILVPAAIEKVIRKSNAD---KVQAKIIVEAANG--PL-T-------PAAHAMLLKKNVLIIPDIFANA 413 (535)
Q Consensus 351 ---ell~-~~~DILiPaA~~~~It~~na~---~i~AkiIvEgAN~--p~-T-------~eA~~iL~~rGI~viPD~laNa 413 (535)
+++. .++|++|-||.... +..-+. +-.+.+| .-++. |. + .+..+..+++|+.+++..=...
T Consensus 67 ~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vv-D~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~P 144 (405)
T 4ina_A 67 ELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYL-DTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDP 144 (405)
T ss_dssp HHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEE-ESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTT
T ss_pred HHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEE-EecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCc
Confidence 2332 25899999987532 211111 1123444 34332 21 1 1455667788988877654433
No 319
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.77 E-value=0.71 Score=45.99 Aligned_cols=92 Identities=12% Similarity=0.167 Sum_probs=55.6
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC-cccCCCCcc------cCC-CC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT-IKGYPGTKS------APT-DI 352 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~-v~~~~~a~~------i~~-el 352 (535)
++|+|.|.|++|..+|..|.+.|..|+.+. + + .+ +..++.|- +....+... .++ +.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~-r-------~-------~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~ 66 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLL-R-------R-------DY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE 66 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEEC-S-------T-------TH-HHHHHTCEEEEETTCCEEESCCCEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEE-c-------C-------cH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH
Confidence 579999999999999999999999887633 1 1 12 22233332 221111111 122 21
Q ss_pred ccccceEEeecccccccccccccccc-----ceEEEecCCCCC
Q psy1913 353 MFDKVDILVPAAIEKVIRKSNADKVQ-----AKIIVEAANGPL 390 (535)
Q Consensus 353 l~~~~DILiPaA~~~~It~~na~~i~-----AkiIvEgAN~p~ 390 (535)
. .++|+++-|.....+. +-++.++ -.+|+-.+||--
T Consensus 67 ~-~~~D~vilavk~~~~~-~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 67 I-GPMDLVLVGLKTFANS-RYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp H-CCCSEEEECCCGGGGG-GHHHHHGGGCCTTCEEEECCSSSS
T ss_pred c-CCCCEEEEecCCCCcH-HHHHHHHhhcCCCCEEEEecCCCC
Confidence 2 4799999998766544 3333332 257888999864
No 320
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.76 E-value=0.28 Score=47.81 Aligned_cols=35 Identities=20% Similarity=0.536 Sum_probs=30.4
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHD 313 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~ 313 (535)
++++|+|.|.|.+|..+|+.|.+.|..-+.|.|.+
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 46899999999999999999999998666667654
No 321
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=86.66 E-value=0.62 Score=47.00 Aligned_cols=75 Identities=17% Similarity=0.096 Sum_probs=47.7
Q ss_pred CC--cEEEEEcc-ccHHHHHHHHHHHCCC-eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCCcccCC--
Q psy1913 279 EN--KTYIVQGF-GNVGFHAARYFRRGRA-KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGTKSAPT-- 350 (535)
Q Consensus 279 ~g--~~VaIQGf-GnVG~~~A~~L~e~Ga-kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a~~i~~-- 350 (535)
.| .+|.|.|. |.+|..+++++...|+ +|+++. .+.+.+...+++.|. +.++........
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~-------------~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~ 224 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGIC-------------GTHEKCILLTSELGFDAAINYKKDNVAEQLR 224 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEE-------------SCHHHHHHHHHTSCCSEEEETTTSCHHHHHH
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEe-------------CCHHHHHHHHHHcCCceEEecCchHHHHHHH
Confidence 57 99999998 9999999999999999 998843 555565555443442 111111110000
Q ss_pred CCccccceEEeecccc
Q psy1913 351 DIMFDKVDILVPAAIE 366 (535)
Q Consensus 351 ell~~~~DILiPaA~~ 366 (535)
++....+|++|-|+..
T Consensus 225 ~~~~~~~d~vi~~~G~ 240 (357)
T 2zb4_A 225 ESCPAGVDVYFDNVGG 240 (357)
T ss_dssp HHCTTCEEEEEESCCH
T ss_pred HhcCCCCCEEEECCCH
Confidence 1111268999999864
No 322
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=86.58 E-value=0.89 Score=46.21 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=28.9
Q ss_pred CCcEEEEEccccHHHH-HHHHHHHC-CCeEEEEecCC
Q psy1913 279 ENKTYIVQGFGNVGFH-AARYFRRG-RAKCLAIVEHD 313 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~-~A~~L~e~-GakVVaVsD~~ 313 (535)
+-.+|+|+|+|++|.. .+..|.+. +++|+||+|.+
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~ 40 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS 40 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC
Confidence 4479999999999986 67777664 89999999865
No 323
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.48 E-value=0.99 Score=45.35 Aligned_cols=93 Identities=15% Similarity=0.190 Sum_probs=55.3
Q ss_pred CCcEEEEEccc-cHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCCcccCC--CC
Q psy1913 279 ENKTYIVQGFG-NVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGTKSAPT--DI 352 (535)
Q Consensus 279 ~g~~VaIQGfG-nVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a~~i~~--el 352 (535)
.|.+|.|.|.| .+|..+++++... |++|+++ |.+.+.+...+ +.|. +.++........ ++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~-------------~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGV-------------DVREEAVEAAK-RAGADYVINASMQDPLAEIRRI 235 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEE-------------ESSHHHHHHHH-HHTCSEEEETTTSCHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEE-------------cCCHHHHHHHH-HhCCCEEecCCCccHHHHHHHH
Confidence 58999999998 9999999999998 9999883 35555554443 3331 111111111000 11
Q ss_pred cc-ccceEEeecccccccccccccccc--ceEEEec
Q psy1913 353 MF-DKVDILVPAAIEKVIRKSNADKVQ--AKIIVEA 385 (535)
Q Consensus 353 l~-~~~DILiPaA~~~~It~~na~~i~--AkiIvEg 385 (535)
.. -.+|++|-|+..........+.++ .++|.=|
T Consensus 236 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECC
T ss_pred hcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEEC
Confidence 21 378999999875423333334342 4666544
No 324
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.40 E-value=1.1 Score=45.70 Aligned_cols=75 Identities=16% Similarity=0.054 Sum_probs=45.9
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC--eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccC-CCCcccCC--CCc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA--KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGY-PGTKSAPT--DIM 353 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~-~~a~~i~~--ell 353 (535)
.+++|+|.|.|+||+.+|..|...|. .|+- .|++.+.+.-..........| +..+..+. +-
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l-------------~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a- 73 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGI-------------VDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSD- 73 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEE-------------ECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGG-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEE-------------EeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHH-
Confidence 57899999999999999999998876 5665 446666554332221111111 12221222 22
Q ss_pred cccceEEeeccccc
Q psy1913 354 FDKVDILVPAAIEK 367 (535)
Q Consensus 354 ~~~~DILiPaA~~~ 367 (535)
-.+|||+|-||.-.
T Consensus 74 ~~~aDiVvi~ag~~ 87 (326)
T 3vku_A 74 AKDADLVVITAGAP 87 (326)
T ss_dssp GTTCSEEEECCCCC
T ss_pred hcCCCEEEECCCCC
Confidence 35899998887643
No 325
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.36 E-value=0.87 Score=41.00 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=29.2
Q ss_pred CCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEec
Q psy1913 279 ENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 279 ~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD 311 (535)
.+++|.|.|. |.+|+++++.|.+.|++|++++-
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 3479999997 99999999999999999998753
No 326
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=86.35 E-value=1.1 Score=42.48 Aligned_cols=33 Identities=33% Similarity=0.368 Sum_probs=29.6
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~ 39 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVA 39 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 468999999995 889999999999999998883
No 327
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=86.25 E-value=1.2 Score=41.80 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=30.4
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++|.|.|. |.+|+++|+.|.+.|++|+++.
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVT 38 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 478999999996 9999999999999999998843
No 328
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=86.06 E-value=1.2 Score=41.79 Aligned_cols=34 Identities=15% Similarity=0.296 Sum_probs=30.2
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|++|.|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVS 38 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 368999999996 8999999999999999998843
No 329
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=86.00 E-value=0.54 Score=47.40 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=56.6
Q ss_pred CcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcccc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDK 356 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~ 356 (535)
-.+|+|.|+|++|+..++.|.+. +.++++|+|.+..- . +- . +....++ +++ .+
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~----~--~~----------~-------gv~~~~d~~~ll-~~ 58 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL----D--TK----------T-------PVFDVADVDKHA-DD 58 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC----S--SS----------S-------CEEEGGGGGGTT-TT
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH----h--hc----------C-------CCceeCCHHHHh-cC
Confidence 46899999999999999999876 78999999874211 1 21 1 1121222 555 68
Q ss_pred ceEEeeccccccccccccc-ccc--ceEEEecCCCCCCHHH
Q psy1913 357 VDILVPAAIEKVIRKSNAD-KVQ--AKIIVEAANGPLTPAA 394 (535)
Q Consensus 357 ~DILiPaA~~~~It~~na~-~i~--AkiIvEgAN~p~T~eA 394 (535)
+|+++-|..... +.+++. .++ ..+|+|-.=+...+++
T Consensus 59 ~DvViiatp~~~-h~~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 59 VDVLFLCMGSAT-DIPEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp CSEEEECSCTTT-HHHHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred CCEEEEcCCcHH-HHHHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 999999986653 334333 233 3677765333333454
No 330
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.89 E-value=1.5 Score=46.59 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=68.3
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCccc----CC-CCc
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSA----PT-DIM 353 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i----~~-ell 353 (535)
.-++|.|.|.|++|+++|+.|. .+..|.-|= -|.+....+.++. +....+ +. ++|
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE-------------~d~~r~~~la~~l------~~~~Vi~GD~td~~~L 293 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLE-QTYSVKLIE-------------RNLQRAEKLSEEL------ENTIVFCGDAADQELL 293 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHT-TTSEEEEEE-------------SCHHHHHHHHHHC------TTSEEEESCTTCHHHH
T ss_pred cccEEEEEcchHHHHHHHHHhh-hcCceEEEe-------------cCHHHHHHHHHHC------CCceEEeccccchhhH
Confidence 4579999999999999999985 456665532 5566666655543 222222 11 344
Q ss_pred c----ccceEEeeccc---cccccccccccccceEEEecCCCCCCHHHHHHHHhCCcee
Q psy1913 354 F----DKVDILVPAAI---EKVIRKSNADKVQAKIIVEAANGPLTPAAHAMLLKKNVLI 405 (535)
Q Consensus 354 ~----~~~DILiPaA~---~~~It~~na~~i~AkiIvEgAN~p~T~eA~~iL~~rGI~v 405 (535)
. .++|+||-++- .|.+..--|.++.++-++--.|.| +-..+++.-||-.
T Consensus 294 ~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~---~~~~l~~~~gid~ 349 (461)
T 4g65_A 294 TEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRG---AYVDLVQGGVIDV 349 (461)
T ss_dssp HHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCH---HHHHHHCSSSSCE
T ss_pred hhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCcccccccccc---chhhhhhccccce
Confidence 2 58999999887 455666667777776666566654 5556677777643
No 331
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=85.62 E-value=1.6 Score=41.41 Aligned_cols=29 Identities=10% Similarity=-0.046 Sum_probs=25.4
Q ss_pred CcEEEEEc-cccHHHHHHHHHHHCCCeEEE
Q psy1913 280 NKTYIVQG-FGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 280 g~~VaIQG-fGnVG~~~A~~L~e~GakVVa 308 (535)
|+++.|.| .|.+|+++|+.|++.|++|+.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~ 30 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVC 30 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 46788887 589999999999999999998
No 332
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.59 E-value=1.2 Score=43.35 Aligned_cols=45 Identities=16% Similarity=0.104 Sum_probs=36.6
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHH
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKI 334 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~ 334 (535)
+|+|+++.|.|. |-+|+++|+.|++.|++|+. .+.+.+.+.+..+
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~-------------~~r~~~~~~~~~~ 68 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILI-------------NGTDPSRVAQTVQ 68 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-------------CCSCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHH
Confidence 478999999985 78999999999999999988 4466666655544
No 333
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=85.57 E-value=0.81 Score=48.25 Aligned_cols=35 Identities=29% Similarity=0.306 Sum_probs=31.3
Q ss_pred CCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 277 CMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 277 ~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
++++++|.|.|.|..|..+|++|+++|++|.+ +|.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~-~D~ 40 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTV-NDG 40 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEE-EES
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEE-EeC
Confidence 46899999999999999999999999999886 454
No 334
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.52 E-value=0.56 Score=45.81 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=31.5
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHD 313 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~ 313 (535)
++++|.|.|.|.+|..+++.|...|..-+.|.|.+
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46899999999999999999999999888888764
No 335
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=85.47 E-value=1.6 Score=43.53 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=63.2
Q ss_pred HHhCCCCCCCCcEEEEEccccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCCc
Q psy1913 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGTK 346 (535)
Q Consensus 270 ~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a~ 346 (535)
+..++. .|.+|+|.|.|.+|..++..+... |++|+++. .+.+++... ++.|. +.++....
T Consensus 157 ~~~~~~---~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~-------------~~~~r~~~~-~~~Ga~~~i~~~~~~ 219 (348)
T 4eez_A 157 KVSGVK---PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVD-------------INQDKLNLA-KKIGADVTINSGDVN 219 (348)
T ss_dssp HHHTCC---TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEE-------------SCHHHHHHH-HHTTCSEEEEC-CCC
T ss_pred cccCCC---CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEE-------------CcHHHhhhh-hhcCCeEEEeCCCCC
Confidence 344553 589999999999999999988765 78999843 555555333 33331 11221111
Q ss_pred ccCC--CCc-cccceEEeeccccccccccccccc--cceEEEecCCCC-CCHHHHHHHHhCCceee
Q psy1913 347 SAPT--DIM-FDKVDILVPAAIEKVIRKSNADKV--QAKIIVEAANGP-LTPAAHAMLLKKNVLII 406 (535)
Q Consensus 347 ~i~~--ell-~~~~DILiPaA~~~~It~~na~~i--~AkiIvEgAN~p-~T~eA~~iL~~rGI~vi 406 (535)
..+. ++. ...+|+.+.|+.....-......+ ..+++.-|.-.. .+..... +..+++.+.
T Consensus 220 ~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~ 284 (348)
T 4eez_A 220 PVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPT-VVFDGVEVA 284 (348)
T ss_dssp HHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHH-HHHSCCEEE
T ss_pred HHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHH-HHhCCeEEE
Confidence 1111 111 246788888876543323333333 235555543222 2222222 345666554
No 336
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=85.47 E-value=1.2 Score=43.47 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=30.5
Q ss_pred CCCCcEEEEEcc---ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF---GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf---GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+.
T Consensus 5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEee
Confidence 578999999997 6899999999999999998753
No 337
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=85.45 E-value=0.53 Score=44.94 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=34.1
Q ss_pred CcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 280 NKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 280 g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
++++.|.|. |-+|+++|+.|++.|++|+.+ |.+.+.+.+..++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-------------~r~~~~~~~~~~~ 45 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFI-------------DIDEKRSADFAKE 45 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHh
Confidence 578999985 789999999999999999883 3666666665544
No 338
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.39 E-value=1.8 Score=43.41 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=28.5
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
.|.+|+|.|.|.||..+++++...|++|++
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~ 193 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVA 193 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 589999999999999999999999999998
No 339
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=85.34 E-value=0.31 Score=47.18 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=28.6
Q ss_pred CCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+.+++|.|.|. |.+|+++|+.|++.|++|+++.
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 46789999985 8999999999999999998854
No 340
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=85.29 E-value=0.79 Score=46.35 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=28.9
Q ss_pred CCcEEEEE-ccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQ-GFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQ-GfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|+|. |.|.||..+++++...|++|+++.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~ 199 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATA 199 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 58999999 689999999999999999999843
No 341
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=85.18 E-value=1.3 Score=42.93 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=29.7
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.| .|-+|+++|+.|++.|++|+.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 41 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIV 41 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5889999999999999999873
No 342
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.16 E-value=1.5 Score=42.25 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=29.6
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
.++|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 41 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLA 41 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence 478999999995 789999999999999999873
No 343
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=85.12 E-value=1 Score=43.18 Aligned_cols=46 Identities=22% Similarity=0.286 Sum_probs=36.9
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
+|+|+++.|.|. |.+|+++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-------------~r~~~~~~~~~~~ 49 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVIT-------------GRTKEKLEEAKLE 49 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHH
Confidence 478999999985 789999999999999999883 3556666665544
No 344
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.10 E-value=1.4 Score=45.15 Aligned_cols=75 Identities=12% Similarity=0.073 Sum_probs=46.2
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCC--eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCc-cc-C-C-C
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRA--KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTK-SA-P-T-D 351 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~-~i-~-~-e 351 (535)
...++|+|.|.|+||+.+|..|...|. .|+- .|++.+.+.....+......|+... .+ + + +
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L-------------~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~ 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELAL-------------VDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEE-------------ECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEE-------------EeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH
Confidence 456899999999999999999998886 5555 4466655544332211111232221 11 1 2 2
Q ss_pred CccccceEEeecccc
Q psy1913 352 IMFDKVDILVPAAIE 366 (535)
Q Consensus 352 ll~~~~DILiPaA~~ 366 (535)
- -.+|||+|-||.-
T Consensus 84 ~-~~~aDiVvi~aG~ 97 (331)
T 4aj2_A 84 V-TANSKLVIITAGA 97 (331)
T ss_dssp G-GTTEEEEEECCSC
T ss_pred H-hCCCCEEEEccCC
Confidence 1 3699999877753
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=85.06 E-value=1.1 Score=45.07 Aligned_cols=31 Identities=16% Similarity=0.310 Sum_probs=28.9
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC-eEEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA-KCLAI 309 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaV 309 (535)
.|.+|+|.|.|.||..+++++...|+ +|+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~ 198 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVS 198 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 68999999999999999999999999 89983
No 346
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=85.01 E-value=0.21 Score=48.04 Aligned_cols=39 Identities=18% Similarity=0.249 Sum_probs=31.4
Q ss_pred HHhCCCCCCCCcEEEEEccccHHHHHHHHH--HHCCCeEEEEecC
Q psy1913 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYF--RRGRAKCLAIVEH 312 (535)
Q Consensus 270 ~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L--~e~GakVVaVsD~ 312 (535)
+.+|++ +..+|+|.|.|+.|..+++.+ .. |+++||+.|.
T Consensus 73 ~~lg~~---~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~ 113 (211)
T 2dt5_A 73 HILGLN---RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV 113 (211)
T ss_dssp HHHTTT---SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES
T ss_pred HHhCcC---CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC
Confidence 456764 457999999999999999863 34 8999999885
No 347
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=84.94 E-value=1.4 Score=42.11 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=29.7
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
.++|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 42 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILL 42 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 478999999985 789999999999999999873
No 348
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.85 E-value=1.4 Score=42.38 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=29.5
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~ 38 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFC 38 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 478999999984 789999999999999998873
No 349
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=84.82 E-value=5.3 Score=41.26 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=29.3
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
+...+|+|=|||-+|+.+++.+.+. ...||+|.|.
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~ 44 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDP 44 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCC
Confidence 4678999999999999999998875 4799999873
No 350
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.75 E-value=1.2 Score=43.72 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=29.1
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVa 308 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~ 78 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAI 78 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 478999999995 78999999999999999886
No 351
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.73 E-value=0.75 Score=51.77 Aligned_cols=39 Identities=23% Similarity=0.138 Sum_probs=33.0
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHH
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHT 331 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~ 331 (535)
=++|+|+|.|++|..+|..|.+.|..|+. .|.+.+.+.+
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l-------------~D~~~~~~~~ 352 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILM-------------KDINEHGIEQ 352 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEE-------------ECSSHHHHHH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEE-------------EECCHHHHHH
Confidence 46899999999999999999999999887 5566666654
No 352
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=84.69 E-value=1.3 Score=45.41 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=28.1
Q ss_pred cEEEEEc-cccHHHHHHHHHHHCC-CeEEEEecC
Q psy1913 281 KTYIVQG-FGNVGFHAARYFRRGR-AKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQG-fGnVG~~~A~~L~e~G-akVVaVsD~ 312 (535)
.+|+|.| +|.||+.+++.|.+.. ..|++|.+.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~ 38 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR 38 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence 6899999 8999999999998764 589998874
No 353
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=84.66 E-value=1.1 Score=43.38 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=38.0
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHc
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITK 336 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~ 336 (535)
+++|+++.|.|. |.+|+++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~-------------~r~~~~~~~~~~~~ 74 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIA-------------DLAAEKGKALADEL 74 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-------------eCChHHHHHHHHHh
Confidence 468999999985 789999999999999999883 36667776666553
No 354
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=84.60 E-value=0.87 Score=44.56 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=28.6
Q ss_pred CCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
|++++|.|.|. |.+|+++++.|.+.|++|+++.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~ 34 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGAD 34 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEE
Confidence 35789999996 9999999999999999998864
No 355
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=84.55 E-value=1.4 Score=43.02 Aligned_cols=46 Identities=33% Similarity=0.308 Sum_probs=37.9
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+. .+.+.+.+.+..++
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~-------------~~r~~~~~~~~~~~ 51 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVV-------------TARNGNALAELTDE 51 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-------------CCSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-------------EECCHHHHHHHHHH
Confidence 478999999985 78999999999999999988 55777777666554
No 356
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=84.53 E-value=1.4 Score=46.17 Aligned_cols=117 Identities=16% Similarity=0.108 Sum_probs=70.4
Q ss_pred cEEEEEcc-ccHHHHHHHHHHHC-CCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--c--ccCCCCc-c----cC
Q psy1913 281 KTYIVQGF-GNVGFHAARYFRRG-RAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--I--KGYPGTK-S----AP 349 (535)
Q Consensus 281 ~~VaIQGf-GnVG~~~A~~L~e~-GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v--~~~~~a~-~----i~ 349 (535)
++|+|.|+ |.+|...+..+.+. +++|+|++ ++-|++.|.+..++++. + .+-.... . +.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~-----------a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~ 72 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGIS-----------FHSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWK 72 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEE-----------ESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEE-----------ccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHcc
Confidence 78999995 99999999999886 78999987 55889999988887752 1 0100110 0 11
Q ss_pred C-----CCcc-ccceEEeeccccccccccccccccceEEEecCCCCCCHHHHHH----HHhCCceeecc
Q psy1913 350 T-----DIMF-DKVDILVPAAIEKVIRKSNADKVQAKIIVEAANGPLTPAAHAM----LLKKNVLIIPD 408 (535)
Q Consensus 350 ~-----ell~-~~~DILiPaA~~~~It~~na~~i~AkiIvEgAN~p~T~eA~~i----L~~rGI~viPD 408 (535)
. ++.. .++|+++-|..+..=-.-....+++.--+=-||--+.-.+.++ .+++|+.++|-
T Consensus 73 G~~~l~el~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g~~llPV 141 (376)
T 3a06_A 73 GSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELIPV 141 (376)
T ss_dssp STTHHHHHHHHHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHCCEEEEC
T ss_pred CHHHHHHHhcCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcCCEEEEE
Confidence 1 2333 3589988875433222222333444333344565443333333 34567777774
No 357
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=84.53 E-value=0.77 Score=47.26 Aligned_cols=32 Identities=13% Similarity=0.377 Sum_probs=29.1
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
.+|+|.|||.+|+.+++.|.+. +..||+|.|.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~ 35 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT 35 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 4899999999999999999876 6999999985
No 358
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=84.53 E-value=1.2 Score=42.03 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=29.9
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
.++|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~ 44 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLL 44 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 478999999995 899999999999999999884
No 359
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=84.50 E-value=1.4 Score=44.20 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=28.7
Q ss_pred CCcEEEEE-ccccHHHHHHHHHHHCCCeEEEE
Q psy1913 279 ENKTYIVQ-GFGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 279 ~g~~VaIQ-GfGnVG~~~A~~L~e~GakVVaV 309 (535)
.|.+|+|. |.|.||..+++++...|++|+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~ 181 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITT 181 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEE
Confidence 58999999 79999999999999999999994
No 360
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=84.48 E-value=1.5 Score=41.17 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=30.0
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
+++++++.|.| .|.+|+++|+.|.+.|++|+++.
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILID 42 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 36889999998 58999999999999999998843
No 361
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=84.45 E-value=1.5 Score=49.40 Aligned_cols=39 Identities=23% Similarity=0.133 Sum_probs=33.2
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHH
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTY 332 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~ 332 (535)
++|+|.|.|.+|..+|..|.+.|..|+. .|.+.+.+.+.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l-------------~D~~~~~~~~~ 351 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVIL-------------KEVNEKFLEAG 351 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEE-------------ECSSHHHHHHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEE-------------EECCHHHHHHH
Confidence 5799999999999999999999999988 55776666543
No 362
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=84.44 E-value=1.1 Score=43.59 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=32.1
Q ss_pred CCCCcEEEEEcc-----------------ccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 277 CMENKTYIVQGF-----------------GNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 277 ~l~g~~VaIQGf-----------------GnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
+|+|++|.|.|- |..|+.+|+.|.+.|++|+.++..
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999999998 789999999999999999987543
No 363
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=84.39 E-value=1.6 Score=41.52 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=29.5
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~ 37 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIA 37 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999999884
No 364
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=84.31 E-value=1.7 Score=46.90 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=67.9
Q ss_pred CCchHHHHHHHHHHHHhcHHH--HHHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCC
Q psy1913 248 ESATGRGVFTAAEILVNNEEY--MCEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEIN 325 (535)
Q Consensus 248 ~~aTg~GV~~~i~~~l~~~~~--~~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLD 325 (535)
..-.+.|...+++.+++.... ...-. ..+++++++.|.|.|.+|+.+|..|++.|++|+. ++ -+
T Consensus 331 ~nTD~~G~~~~l~~~~~~~~~~~~~~~~-~~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~i-~~------------R~ 396 (523)
T 2o7s_A 331 YNTDCIGSISAIEDGLRSSGDPSSVPSS-SSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVI-AN------------RT 396 (523)
T ss_dssp ECCHHHHHHHHHHHHC--------------------CEEEECCSHHHHHHHHHHHHHCC-CEE-EE------------SS
T ss_pred EcCCHHHHHHHHHHhhhhcccccccccc-ccccCCCEEEEECCcHHHHHHHHHHHHCCCEEEE-EE------------CC
Confidence 344556777777654321000 00000 1246889999999999999999999999998765 22 45
Q ss_pred HHHHHHHHHHcC-CcccCCCCcccCC--CCccccceEEeecccccc---ccccccc--cc-cceEEEecCCCC-CCHHHH
Q psy1913 326 YKDLHTYKITKG-TIKGYPGTKSAPT--DIMFDKVDILVPAAIEKV---IRKSNAD--KV-QAKIIVEAANGP-LTPAAH 395 (535)
Q Consensus 326 i~~L~~~~~~~g-~v~~~~~a~~i~~--ell~~~~DILiPaA~~~~---It~~na~--~i-~AkiIvEgAN~p-~T~eA~ 395 (535)
.+.+.+..++.+ .+.. ++. ++....+||+|-||.-+. ++..... .+ ....+.+-.=.| .||-..
T Consensus 397 ~~~a~~la~~~~~~~~~------~~dl~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~ 470 (523)
T 2o7s_A 397 YERALELAEAIGGKALS------LTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLR 470 (523)
T ss_dssp HHHHHHHHHHTTC-CEE------TTTTTTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHH
T ss_pred HHHHHHHHHHcCCceee------HHHhhhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHH
Confidence 566666655542 1111 121 111235899999986322 1111111 11 235666663334 565433
Q ss_pred HHHHhCCcee
Q psy1913 396 AMLLKKNVLI 405 (535)
Q Consensus 396 ~iL~~rGI~v 405 (535)
+. .++|..+
T Consensus 471 ~a-~~~G~~~ 479 (523)
T 2o7s_A 471 EA-EESGAIT 479 (523)
T ss_dssp HH-HTTTCEE
T ss_pred HH-HHCCCEE
Confidence 32 3456543
No 365
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=84.30 E-value=1.7 Score=41.19 Aligned_cols=34 Identities=15% Similarity=0.079 Sum_probs=30.2
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++|.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACD 38 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 58999999999999999998843
No 366
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.27 E-value=1.6 Score=41.24 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=29.6
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
+++++|.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~ 44 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIAD 44 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 6789999998 58999999999999999998853
No 367
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=84.26 E-value=0.52 Score=46.12 Aligned_cols=85 Identities=11% Similarity=0.066 Sum_probs=48.3
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccC-C-CCccccce
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAP-T-DIMFDKVD 358 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~-~-ell~~~~D 358 (535)
++|.|+|.|++|..+++.|.+. ..|+.|.| .+.+.+.+..+..+. ..+ . +++ .+||
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~------------~~~~~~~~~~~~~g~--------~~~~~~~~~-~~~D 60 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILS------------RSIDRARNLAEVYGG--------KAATLEKHP-ELNG 60 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEEC------------SSHHHHHHHHHHTCC--------CCCSSCCCC-C---
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEe------------CCHHHHHHHHHHcCC--------ccCCHHHHH-hcCC
Confidence 4689999999999999999877 76654333 455666666554432 112 2 444 3799
Q ss_pred EEeeccccccccccccccc--cceEEEecCCC
Q psy1913 359 ILVPAAIEKVIRKSNADKV--QAKIIVEAANG 388 (535)
Q Consensus 359 ILiPaA~~~~It~~na~~i--~AkiIvEgAN~ 388 (535)
++|-|.....+ .+-+..+ .-++|+.-+.+
T Consensus 61 vVilav~~~~~-~~v~~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 61 VVFVIVPDRYI-KTVANHLNLGDAVLVHCSGF 91 (276)
T ss_dssp CEEECSCTTTH-HHHHTTTCCSSCCEEECCSS
T ss_pred EEEEeCChHHH-HHHHHHhccCCCEEEECCCC
Confidence 99999877653 3444444 23466655533
No 368
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=84.14 E-value=0.96 Score=44.67 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=32.8
Q ss_pred CCCCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEec
Q psy1913 275 EPCMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 275 ~~~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD 311 (535)
+.++++++|.|.|. |-+|+++++.|.+.|++|+++.-
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 44688999999996 99999999999999999998653
No 369
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=84.12 E-value=0.72 Score=43.11 Aligned_cols=32 Identities=13% Similarity=0.173 Sum_probs=27.7
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
.+++|.|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 36 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMA 36 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 467888887 68999999999999999998843
No 370
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=84.09 E-value=1.6 Score=41.69 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=29.5
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.|. |.+|+++|+.|.+.|++|+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (263)
T 3ai3_A 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLV 37 (263)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 468999999984 899999999999999999884
No 371
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=84.04 E-value=1.7 Score=41.68 Aligned_cols=33 Identities=21% Similarity=0.177 Sum_probs=29.7
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFG 37 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999999884
No 372
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.00 E-value=1.6 Score=43.52 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=29.8
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++|++|.|.|. |-+|+++|+.|++.|++|+.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~ 38 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIA 38 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEE
Confidence 478999999995 899999999999999999883
No 373
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=83.87 E-value=0.8 Score=46.48 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=29.3
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
+|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 180 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~ 211 (366)
T 2cdc_A 180 NCRKVLVVGTGPIGVLFTLLFRTYGLEVWMAN 211 (366)
T ss_dssp TTCEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 38999999999999999999999999998854
No 374
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=83.87 E-value=1.7 Score=41.58 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=29.5
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~ 39 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTC 39 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 36899999998 5899999999999999999884
No 375
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=83.84 E-value=0.56 Score=47.02 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=62.5
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCc----cc
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIM----FD 355 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell----~~ 355 (535)
..+|+|.|+|.+|+.+++.|.+.|. |+.| |-|.+.+. ..+ .+. .-+.+ ...+.+.| -.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vi-------------d~~~~~~~-~~~-~~~-~~i~g-d~~~~~~L~~a~i~ 176 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLA-------------EDENVRKK-VLR-SGA-NFVHG-DPTRVSDLEKANVR 176 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEE-------------SCGGGHHH-HHH-TTC-EEEES-CTTSHHHHHHTCST
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEE-------------eCChhhhh-HHh-CCc-EEEEe-CCCCHHHHHhcChh
Confidence 4589999999999999999999998 7763 24445554 332 221 00000 11111222 24
Q ss_pred cceEEeecccccc---ccccccccc--cceEEEecCCCCCCHHHHHHHHhCCce--eecc
Q psy1913 356 KVDILVPAAIEKV---IRKSNADKV--QAKIIVEAANGPLTPAAHAMLLKKNVL--IIPD 408 (535)
Q Consensus 356 ~~DILiPaA~~~~---It~~na~~i--~AkiIvEgAN~p~T~eA~~iL~~rGI~--viPD 408 (535)
++|.++-+...+. .....+.++ +.++|+..-| ++..+.|++.|+. +.|.
T Consensus 177 ~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~iiar~~~----~~~~~~l~~~G~d~vi~~~ 232 (336)
T 1lnq_A 177 GARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER----YENIEQLRMAGADQVISPF 232 (336)
T ss_dssp TEEEEEECCSSHHHHHHHHHHHHTTCTTSEEEEECSS----GGGHHHHHHTTCSEEECHH
T ss_pred hccEEEEcCCccHHHHHHHHHHHHHCCCCeEEEEECC----HHHHHHHHHcCCCEEEChh
Confidence 7899888775432 223334444 2478887643 3445678888874 4454
No 376
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.75 E-value=0.49 Score=48.40 Aligned_cols=28 Identities=11% Similarity=0.051 Sum_probs=25.2
Q ss_pred cEEEEEccccHHHHHHHHHHHCC-------CeEEE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGR-------AKCLA 308 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~G-------akVVa 308 (535)
++|+|.|.|++|..+|..|.+.| ..|+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~ 56 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRM 56 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEE
Confidence 47999999999999999999988 77765
No 377
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=83.74 E-value=1.4 Score=40.75 Aligned_cols=92 Identities=16% Similarity=0.075 Sum_probs=55.5
Q ss_pred cEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCccccc
Q psy1913 281 KTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMFDKV 357 (535)
Q Consensus 281 ~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~~~~ 357 (535)
++|+|.| .|++|+.+++.|.+.|.+|+.+ |-+.+.+.+..+..+....-.... .+. +.+ .+|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~-------------~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~ 65 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVG-------------SRREEKAEAKAAEYRRIAGDASIT-GMKNEDAA-EAC 65 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEE-------------ESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHH-HHC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHHhccccccCCCC-hhhHHHHH-hcC
Confidence 3799999 9999999999999999998773 244455544443322000000011 111 222 479
Q ss_pred eEEeeccccccccccccccc----cceEEEecCCC
Q psy1913 358 DILVPAAIEKVIRKSNADKV----QAKIIVEAANG 388 (535)
Q Consensus 358 DILiPaA~~~~It~~na~~i----~AkiIvEgAN~ 388 (535)
|++|-|.....+. +-+..+ +-++|+..+|+
T Consensus 66 D~Vi~~~~~~~~~-~~~~~l~~~~~~~~vi~~~~g 99 (212)
T 1jay_A 66 DIAVLTIPWEHAI-DTARDLKNILREKIVVSPLVP 99 (212)
T ss_dssp SEEEECSCHHHHH-HHHHHTHHHHTTSEEEECCCC
T ss_pred CEEEEeCChhhHH-HHHHHHHHHcCCCEEEEcCCC
Confidence 9999998765532 333333 34688888875
No 378
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=83.67 E-value=0.75 Score=46.22 Aligned_cols=71 Identities=17% Similarity=0.054 Sum_probs=44.2
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCC--CCcc-ccc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPT--DIMF-DKV 357 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~--ell~-~~~ 357 (535)
.+|+|+|+|..|...++.| ..+++|+||+|.+ + +-..+++.+..++.|- +...+++ +++. .++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~-----~---~~~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~~v 68 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGV-----P---EEDLSKLEKAISEMNI-----KPKKYNNWWEMLEKEKP 68 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSS-----T---TCCCHHHHHHHHTTTC-----CCEECSSHHHHHHHHCC
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCC-----c---hhhHHHHHHHHHHcCC-----CCcccCCHHHHhcCCCC
Confidence 5899999999988777777 7789999999864 1 0122344444433331 1222333 5554 467
Q ss_pred eEEeeccc
Q psy1913 358 DILVPAAI 365 (535)
Q Consensus 358 DILiPaA~ 365 (535)
|+++-|+.
T Consensus 69 D~V~I~tp 76 (337)
T 3ip3_A 69 DILVINTV 76 (337)
T ss_dssp SEEEECSS
T ss_pred CEEEEeCC
Confidence 77777653
No 379
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=83.57 E-value=1.6 Score=44.86 Aligned_cols=75 Identities=12% Similarity=0.034 Sum_probs=45.6
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC--eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCC-Cccc--CC-CC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA--KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPG-TKSA--PT-DI 352 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~-a~~i--~~-el 352 (535)
..++|+|.|.|+||+.+|..|...|. .|+- .|++.+.+............|+. .... +. +-
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L-------------~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVAL-------------VDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV 86 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEE-------------ECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEE-------------EECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH
Confidence 45799999999999999999998886 6665 44666555443221100001221 1111 12 22
Q ss_pred ccccceEEeeccccc
Q psy1913 353 MFDKVDILVPAAIEK 367 (535)
Q Consensus 353 l~~~~DILiPaA~~~ 367 (535)
-.+|||.|-||.-.
T Consensus 87 -~~daDiVIitaG~p 100 (330)
T 3ldh_A 87 -SAGSKLVVITAGAR 100 (330)
T ss_dssp -CSSCSEEEECCSCC
T ss_pred -hCCCCEEEEeCCCC
Confidence 36999999887644
No 380
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=83.55 E-value=1.6 Score=41.68 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=36.4
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
+++|+++.|.|. |.+|+++|+.|.+.|++|+. .+.+.+.+.+..++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-------------~~r~~~~~~~~~~~ 49 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAF-------------SDINEAAGQQLAAE 49 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-------------ECSCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHHH
Confidence 478999999984 89999999999999999988 33556666555444
No 381
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=83.55 E-value=1.3 Score=41.70 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=29.4
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++.|.| .|.+|+++|+.|++.|++|+.+.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTA 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 6789999998 48899999999999999998844
No 382
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=83.50 E-value=1.8 Score=41.47 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=29.5
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALL 37 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999998874
No 383
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=83.50 E-value=8.6 Score=39.58 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=28.1
Q ss_pred cEEEEEccccHHHHHHHHHHHC---CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG---RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~---GakVVaVsD~ 312 (535)
.+|+|=|||-+|+.+.|.+.+. ...||||-|.
T Consensus 3 ~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~ 37 (335)
T 3doc_A 3 VRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL 37 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS
T ss_pred EEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 4899999999999999998886 5789999874
No 384
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.47 E-value=1.3 Score=42.68 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=29.6
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.| .|-+|+++|+.|++.|++|+.+
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 40 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVA 40 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5889999999999999999884
No 385
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=83.45 E-value=1.8 Score=41.41 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=29.4
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLF 37 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 36889999998 5899999999999999999884
No 386
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=83.39 E-value=2 Score=40.03 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=28.7
Q ss_pred CCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++.|.|. |-+|+++|+.|++.|++|+.+.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 37 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVAS 37 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEec
Confidence 57899999995 7899999999999999988754
No 387
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=83.37 E-value=1.4 Score=42.12 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=29.5
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~ 39 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGT 39 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 468999999985 789999999999999999884
No 388
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=83.36 E-value=1.7 Score=41.58 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.5
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 42 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIA 42 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5789999999999999999883
No 389
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=83.34 E-value=0.99 Score=43.66 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=29.4
Q ss_pred CCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEec
Q psy1913 278 MENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 278 l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD 311 (535)
+.+++|.|.|. |.+|+++++.|.+.|++|++++-
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEec
Confidence 46789999997 99999999999999999998653
No 390
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=83.27 E-value=1.2 Score=41.80 Aligned_cols=34 Identities=24% Similarity=0.142 Sum_probs=30.1
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEec
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD 311 (535)
+++++|.|.| .|.+|+++|+.|.+.|++|+.+.+
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~ 37 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGS 37 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 5789999998 589999999999999999998644
No 391
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=83.22 E-value=1.3 Score=44.92 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=29.2
Q ss_pred CCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|.|.|. |.+|..+++++...|++|+++.
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~ 202 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTA 202 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 5899999997 9999999999999999999843
No 392
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=83.20 E-value=2.1 Score=43.00 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=30.9
Q ss_pred HhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCeEEEE
Q psy1913 271 EIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 271 ~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaV 309 (535)
..++. .|.+|+|.|.|.||..+++++...|++|+++
T Consensus 163 ~~~~~---~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~ 198 (352)
T 1e3j_A 163 RAGVQ---LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCT 198 (352)
T ss_dssp HHTCC---TTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCCC---CCCEEEEECCCHHHHHHHHHHHHcCCEEEEE
Confidence 44554 5899999999999999999999999998773
No 393
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=83.20 E-value=1.8 Score=41.81 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=30.5
Q ss_pred CCCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 276 PCMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 276 ~~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
.+++++++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~ 51 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVA 51 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 5899999999999999999884
No 394
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=83.13 E-value=3 Score=40.87 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=30.1
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+|+||++.|.|. +.+|+.+|+.|++.|++|+.+.
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~ 38 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFA 38 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE
Confidence 589999999995 6799999999999999998754
No 395
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=83.13 E-value=1 Score=44.87 Aligned_cols=31 Identities=23% Similarity=0.110 Sum_probs=27.5
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
++|+|+|.|.+|..+|..|++.|.+|+. .|.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v-~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTI-YER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEE-Eec
Confidence 5899999999999999999999999765 453
No 396
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.11 E-value=1.7 Score=42.78 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=29.7
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++|++|.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLS 61 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 478999999995 789999999999999999884
No 397
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=83.11 E-value=14 Score=37.91 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=28.0
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
.+|+|=|||-+|+.+.|.+.+. ...||||-|.
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~ 34 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDP 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECT
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCC
Confidence 4899999999999999988876 5899999864
No 398
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=83.11 E-value=1.3 Score=45.21 Aligned_cols=73 Identities=16% Similarity=0.069 Sum_probs=45.0
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC--eEEEEecCCceEeCCCCCCCCHHHHHHHHHH--cCCcccC-CCCcccC-C-C
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA--KCLAIVEHDTAIVPDKGTEINYKDLHTYKIT--KGTIKGY-PGTKSAP-T-D 351 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga--kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~--~g~v~~~-~~a~~i~-~-e 351 (535)
..++|+|.|.|+||+.+|..|...|. .|+. .|+|.+.+...... .+ ..-+ ...+..+ + +
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l-------------~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~ 69 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVV-------------IDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYE 69 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEE-------------ECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEE-------------EecchHHHHHHHHHHHhc-cccccCCeEEEeCcHH
Confidence 35799999999999999999998886 6666 45666655442211 11 1111 1112112 1 2
Q ss_pred CccccceEEeecccc
Q psy1913 352 IMFDKVDILVPAAIE 366 (535)
Q Consensus 352 ll~~~~DILiPaA~~ 366 (535)
- -.+|||+|-||..
T Consensus 70 a-~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 70 D-CKDADIVCICAGA 83 (326)
T ss_dssp G-GTTCSEEEECCSC
T ss_pred H-hCCCCEEEEeccc
Confidence 2 2589999888754
No 399
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=83.10 E-value=1 Score=48.13 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=35.0
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHH
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYK 333 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~ 333 (535)
.+|+|+|.|-||.-+|-.|++.|.+|++ -|+|.+.+..+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g-------------~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVG-------------YDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEE-------------ECSCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEE-------------EECCHHHHHHHH
Confidence 5899999999999999999999999999 667777766654
No 400
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=83.09 E-value=1.9 Score=41.44 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=29.7
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 43 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLV 43 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999999884
No 401
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=83.09 E-value=2 Score=41.71 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=29.0
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVa 308 (535)
+++++++.|.|. |.+|+++|+.|++.|++|+.
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~ 58 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFI 58 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE
Confidence 368999999984 89999999999999999988
No 402
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=83.08 E-value=1.3 Score=45.03 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=28.0
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC-eEEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA-KCLAI 309 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaV 309 (535)
.|.+|+|.|.|.||..+++++...|+ +|+++
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~ 221 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAV 221 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 58899999999999999999999999 68874
No 403
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=83.08 E-value=1 Score=45.67 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=29.1
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|.|.| .|.||..+++++...|++|+++.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~ 195 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTC 195 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEE
Confidence 589999999 79999999999999999999843
No 404
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=83.06 E-value=1.1 Score=43.98 Aligned_cols=73 Identities=21% Similarity=0.233 Sum_probs=49.2
Q ss_pred CcEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCC----CcccCC---C
Q psy1913 280 NKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPG----TKSAPT---D 351 (535)
Q Consensus 280 g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~----a~~i~~---e 351 (535)
.|+|.|.| .+.+|+.+|+.|++.|++|+. +|.|.+.+.+..++.+.+..+.. ...+.. +
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~-------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~ 68 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCF-------------IDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEY 68 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEE-------------EESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEE-------------EeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHH
Confidence 37899988 577999999999999999988 56888888777766543322211 111111 1
Q ss_pred Ccc--ccceEEeeccc
Q psy1913 352 IMF--DKVDILVPAAI 365 (535)
Q Consensus 352 ll~--~~~DILiPaA~ 365 (535)
+.+ -..||||-+|.
T Consensus 69 ~~~~~g~iDiLVNNAG 84 (247)
T 3ged_A 69 AMEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 111 36899999885
No 405
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=83.03 E-value=0.88 Score=45.62 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=29.2
Q ss_pred CCcEEEEEccc-cHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFG-NVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfG-nVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|+|.|.| .||..+++++...|++|+++.
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 176 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVT 176 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEe
Confidence 58999999987 999999999999999999854
No 406
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=82.99 E-value=1.4 Score=42.58 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=29.4
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 50 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLS 50 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368999999984 789999999999999998873
No 407
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=82.98 E-value=1.4 Score=42.19 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=29.6
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|++|.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~ 59 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLT 59 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999998874
No 408
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=82.96 E-value=1.4 Score=42.62 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=30.1
Q ss_pred CCCCcEEEEEcc---ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF---GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf---GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY 39 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 367899999997 6999999999999999988754
No 409
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=82.89 E-value=1.2 Score=44.32 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=28.8
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
.|++|.|.| .|.+|..+++++...|++|+++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~ 171 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGT 171 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEE
Confidence 589999999 7999999999999999999984
No 410
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=82.88 E-value=2 Score=42.88 Aligned_cols=31 Identities=23% Similarity=0.420 Sum_probs=29.1
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaV 309 (535)
.|.+|+|.|.|.||..+++++...|++|+++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~ 196 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAV 196 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 5899999999999999999999999999994
No 411
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=82.87 E-value=1 Score=44.75 Aligned_cols=93 Identities=15% Similarity=0.166 Sum_probs=55.1
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCCcccCC--CCc
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGTKSAPT--DIM 353 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a~~i~~--ell 353 (535)
.|.+|.|.| .|.+|..+++++...|++|+++. .+.+++...+ +.|. +.++........ ++.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~-------------~~~~~~~~~~-~~Ga~~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTV-------------SSPEKAAHAK-ALGAWETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEE-------------SSHHHHHHHH-HHTCSEEEETTTSCHHHHHHHHT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEe-------------CCHHHHHHHH-HcCCCEEEeCCCccHHHHHHHHh
Confidence 589999999 89999999999999999999844 4555554443 3331 111111111100 111
Q ss_pred -cccceEEeeccccccccccccccc--cceEEEecC
Q psy1913 354 -FDKVDILVPAAIEKVIRKSNADKV--QAKIIVEAA 386 (535)
Q Consensus 354 -~~~~DILiPaA~~~~It~~na~~i--~AkiIvEgA 386 (535)
...+|+++-|+....+ ......+ ..++|.=|.
T Consensus 206 ~~~g~Dvvid~~g~~~~-~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQDTW-LTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp TTCCEEEEEESSCGGGH-HHHHTTEEEEEEEEECCC
T ss_pred CCCCceEEEECCChHHH-HHHHHHhcCCCEEEEEec
Confidence 1379999999875322 2222333 246665544
No 412
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=82.84 E-value=1.5 Score=44.39 Aligned_cols=75 Identities=15% Similarity=0.097 Sum_probs=47.6
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC--cccCCCCcccCC--CCc
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT--IKGYPGTKSAPT--DIM 353 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~--v~~~~~a~~i~~--ell 353 (535)
.|.+|+|.| .|.+|..+++++...|++|+++ +.+.+.+... ++.|. +.++........ ++.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~-------------~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVT-------------AGSQKKLQMA-EKLGAAAGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEE-------------eCCHHHHHHH-HHcCCcEEEecCChHHHHHHHHHh
Confidence 589999999 7999999999999999999983 3555555444 33331 111111111100 111
Q ss_pred -cccceEEeeccccc
Q psy1913 354 -FDKVDILVPAAIEK 367 (535)
Q Consensus 354 -~~~~DILiPaA~~~ 367 (535)
...+|++|-|+...
T Consensus 228 ~~~~~d~vi~~~G~~ 242 (354)
T 2j8z_A 228 KGAGVNLILDCIGGS 242 (354)
T ss_dssp TTSCEEEEEESSCGG
T ss_pred cCCCceEEEECCCch
Confidence 13689999998654
No 413
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=82.82 E-value=1.8 Score=43.65 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=30.8
Q ss_pred HHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCCe-EEE
Q psy1913 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRAK-CLA 308 (535)
Q Consensus 270 ~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Gak-VVa 308 (535)
+..++. .|.+|+|+|.|.||..+++++...|++ |++
T Consensus 173 ~~~~~~---~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~ 209 (363)
T 3m6i_A 173 QRAGVR---LGDPVLICGAGPIGLITMLCAKAAGACPLVI 209 (363)
T ss_dssp HHHTCC---TTCCEEEECCSHHHHHHHHHHHHTTCCSEEE
T ss_pred HHcCCC---CCCEEEEECCCHHHHHHHHHHHHcCCCEEEE
Confidence 345554 589999999999999999999999998 777
No 414
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=82.80 E-value=0.95 Score=43.38 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=28.8
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.++|.|.|.|.+|+++++.|.+.|++|++++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~ 35 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTS 35 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEE
Confidence 3799999999999999999999999999975
No 415
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=82.80 E-value=1.6 Score=41.76 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=29.7
Q ss_pred CCCCcEEEEEcc-cc--HHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GN--VGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-Gn--VG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |. +|+++|+.|++.|++|+.+.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~ 40 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTY 40 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEec
Confidence 478999999996 55 99999999999999988753
No 416
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=82.75 E-value=1.2 Score=44.46 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=29.4
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|.|.| .|.+|..+++++...|++|+++.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 180 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVA 180 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 589999999 89999999999999999999843
No 417
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=82.73 E-value=0.93 Score=44.76 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=27.9
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEec
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD 311 (535)
++++++|.|.|. |.+|+++++.|.+.|++|+++.-
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r 51 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDL 51 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeC
Confidence 467899999997 99999999999999999998754
No 418
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=82.73 E-value=1.6 Score=41.87 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=31.2
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
+++|+++.|.|. |.+|+++|+.|++.|++|+.+.+.
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 478999999995 789999999999999999986543
No 419
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=82.71 E-value=1.3 Score=42.72 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=29.9
Q ss_pred CCCCcEEEEEc---cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG---FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG---fGnVG~~~A~~L~e~GakVVaV 309 (535)
.++|+++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~ 39 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLT 39 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEE
Confidence 36899999999 5999999999999999998874
No 420
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=82.62 E-value=1.7 Score=43.94 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=29.3
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|+|+|.|.||..+++++...|++|+++.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~ 210 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVIS 210 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 58999999999999999999999999988854
No 421
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=82.56 E-value=2 Score=41.42 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=30.3
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++|.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~ 62 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWD 62 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 57899999998 58999999999999999998843
No 422
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=82.31 E-value=1.4 Score=46.49 Aligned_cols=77 Identities=16% Similarity=0.287 Sum_probs=52.4
Q ss_pred CCcEEEEEcc-ccHHHHHHHHHHHCCC---eEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCCcccCCCCcccCCCCcc
Q psy1913 279 ENKTYIVQGF-GNVGFHAARYFRRGRA---KCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGTIKGYPGTKSAPTDIMF 354 (535)
Q Consensus 279 ~g~~VaIQGf-GnVG~~~A~~L~e~Ga---kVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~v~~~~~a~~i~~ell~ 354 (535)
...+|.|.|+ |+||..+++.+...|+ .|.. +|...- ..| +. +. ++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v---------------~D~~~~-----~~g-------~~-~~-~i-- 261 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILK---------------WDIKET-----SRG-------GP-FD-EI-- 261 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEE---------------ECHHHH-----TTC-------SC-CT-HH--
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEE---------------eecccc-----ccC-------Cc-hh-hH--
Confidence 4678999999 9999999999999998 6766 554431 111 11 11 12
Q ss_pred ccceEEeeccc-----cccccccccccc-c-ceEEEecC
Q psy1913 355 DKVDILVPAAI-----EKVIRKSNADKV-Q-AKIIVEAA 386 (535)
Q Consensus 355 ~~~DILiPaA~-----~~~It~~na~~i-~-AkiIvEgA 386 (535)
.++||+|-|++ +..||.+-+.++ + -.+||+-|
T Consensus 262 ~~aDivIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 262 PQADIFINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHSSEEEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred hhCCEEEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 38999999998 566777766666 3 24555443
No 423
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=82.27 E-value=1.5 Score=42.26 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=29.6
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
.++|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~ 40 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLIN 40 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 478999999995 789999999999999999883
No 424
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=82.24 E-value=2 Score=41.66 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=30.2
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.| .|.+|+++|+.|.+.|++|+.++
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~ 57 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIAS 57 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 58999999999999999998843
No 425
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=82.19 E-value=1.3 Score=43.41 Aligned_cols=33 Identities=18% Similarity=0.117 Sum_probs=26.6
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~ 63 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVIT 63 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 578999999984 789999999999999999884
No 426
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=82.18 E-value=1.9 Score=41.82 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=29.6
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
.|+|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIA 57 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 478999999995 689999999999999999884
No 427
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.14 E-value=1.4 Score=42.28 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=29.6
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 42 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVT 42 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 578999999984 889999999999999998873
No 428
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=82.14 E-value=1.4 Score=42.30 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=30.1
Q ss_pred CCCCcEEEEEcc---ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF---GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf---GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++++++.|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY 41 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEc
Confidence 468999999997 6999999999999999988753
No 429
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=82.00 E-value=1.5 Score=41.17 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=29.8
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++|.|.|. |.+|+++++.|.+.|++|+++.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSD 42 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEc
Confidence 368899999984 8999999999999999998843
No 430
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.99 E-value=2.1 Score=41.38 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=30.3
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+.
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 578999999994 7899999999999999998753
No 431
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=81.94 E-value=2.2 Score=41.25 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=29.6
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 51 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTC 51 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999999874
No 432
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=81.86 E-value=2.1 Score=43.67 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=29.1
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~ 225 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT 225 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 58999999999999999999999999988844
No 433
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=81.84 E-value=3.3 Score=42.21 Aligned_cols=33 Identities=21% Similarity=0.096 Sum_probs=31.0
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
+.|++|.|.|.|..|+.+++.+.+.|.+|+++.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d 44 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLD 44 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEe
Confidence 579999999999999999999999999999874
No 434
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=81.78 E-value=2.2 Score=41.42 Aligned_cols=32 Identities=16% Similarity=0.355 Sum_probs=28.9
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
++++++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 52 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVC 52 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 6789999998 5899999999999999999884
No 435
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=81.75 E-value=2.4 Score=41.05 Aligned_cols=35 Identities=23% Similarity=0.180 Sum_probs=30.6
Q ss_pred CCCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 276 PCMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 276 ~~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
..++|+++.|.|. |.+|+++|+.|++.|++|+.+.
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 3578999999995 6799999999999999998753
No 436
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=81.72 E-value=1.2 Score=44.30 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=29.4
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
.++|+++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~ 57 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVN 57 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 478999999984 789999999999999999874
No 437
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=81.69 E-value=2.7 Score=43.02 Aligned_cols=31 Identities=32% Similarity=0.231 Sum_probs=28.0
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC-eEEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA-KCLAI 309 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaV 309 (535)
.|.+|+|.|.|.||..+++++...|+ +|+++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~ 216 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVG 216 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEE
Confidence 58999999999999999999999999 67773
No 438
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=81.67 E-value=2.6 Score=42.47 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=31.4
Q ss_pred HHhCCCCCCCCcEEEEEccccHHHHHHHHHHHCCC-eEEEE
Q psy1913 270 CEIGLEPCMENKTYIVQGFGNVGFHAARYFRRGRA-KCLAI 309 (535)
Q Consensus 270 ~~~g~~~~l~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVaV 309 (535)
+..++. .|.+|+|.|.|.||..+++++...|+ +|+++
T Consensus 165 ~~~~~~---~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 202 (356)
T 1pl8_A 165 RRGGVT---LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVT 202 (356)
T ss_dssp HHHTCC---TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred HhcCCC---CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 345554 58999999999999999999999999 88884
No 439
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=81.67 E-value=1.5 Score=39.91 Aligned_cols=30 Identities=20% Similarity=0.155 Sum_probs=27.1
Q ss_pred cEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 281 KTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 281 ~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++|.|.| .|.+|+++++.|.+.|++|++++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~ 31 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIV 31 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEE
Confidence 4799999 59999999999999999999865
No 440
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=81.65 E-value=1.9 Score=43.57 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=29.3
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|+|+|.|.||..+++++...|++|+++.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~ 211 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVIS 211 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 58999999999999999999999999998854
No 441
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=81.65 E-value=2 Score=40.61 Aligned_cols=44 Identities=14% Similarity=0.124 Sum_probs=34.5
Q ss_pred CCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 279 ENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 279 ~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
.++++.|.|. |-+|+++|+.|.+.|++|+.+ +.+.+.+.+..++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~-------------~r~~~~~~~~~~~ 46 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMM-------------GRRYQRLQQQELL 46 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-------------ESCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-------------ECCHHHHHHHHHH
Confidence 5789999995 789999999999999999884 3566666665544
No 442
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=81.60 E-value=1.3 Score=42.55 Aligned_cols=34 Identities=24% Similarity=0.156 Sum_probs=29.1
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++++++.|.|. |.+|+++|+.|++.|++|+.+.
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~ 38 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGR 38 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 368999999994 7899999999999999988743
No 443
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=81.53 E-value=1.8 Score=41.43 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=29.1
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++|+++.|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 35 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYIT 35 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 36789999998 5889999999999999999874
No 444
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=81.50 E-value=1.2 Score=43.98 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=29.8
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|+|.|.|.||..+++++...|++|++++
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~ 173 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS 173 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE
Confidence 58999999999999999999999999999965
No 445
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=81.48 E-value=1.4 Score=42.44 Aligned_cols=29 Identities=14% Similarity=0.071 Sum_probs=26.4
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEE
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaV 309 (535)
++|+|.|.|++|..+|..|.+.|..|+.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~ 29 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGW 29 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence 37999999999999999999999988764
No 446
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=81.46 E-value=1.8 Score=41.31 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=29.7
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
.++|+++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 44 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVS 44 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999999884
No 447
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=81.40 E-value=1.8 Score=42.57 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=29.9
Q ss_pred CCCCcEEEEEccc---cHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGFG---NVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGfG---nVG~~~A~~L~e~GakVVaVs 310 (535)
.++|+++.|.|.+ .+|+++|+.|++.|++|+.+.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~ 63 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTY 63 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence 4789999999985 899999999999999987643
No 448
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=81.36 E-value=2.3 Score=42.73 Aligned_cols=30 Identities=27% Similarity=0.247 Sum_probs=28.0
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCC-eEEE
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRA-KCLA 308 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~Ga-kVVa 308 (535)
.|.+|+|+|.|.||..+++++...|+ +|++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~ 196 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFA 196 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEE
Confidence 58999999999999999999999999 7888
No 449
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=81.32 E-value=13 Score=37.33 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=29.3
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEec
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD 311 (535)
..++|.|.|.|..|..+++.+.+.|.+|+++..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~ 42 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDR 42 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEC
Confidence 457999999999999999999999999988753
No 450
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=81.26 E-value=1.3 Score=43.09 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=30.0
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |.+|+++|+.|++.|++|+.+.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 63 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAA 63 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 478999999994 8899999999999999988754
No 451
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.23 E-value=1.6 Score=40.04 Aligned_cols=30 Identities=30% Similarity=0.309 Sum_probs=27.1
Q ss_pred cEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 281 KTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 281 ~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
++|.|.|. |.+|+++++.|.+.|++|++++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~ 31 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVV 31 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 46899996 9999999999999999999965
No 452
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=81.09 E-value=1.9 Score=41.49 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=29.5
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++.|.| .|.+|+++|+.|.+.|++|++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 63 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCA 63 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 6789999998 58999999999999999998843
No 453
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=81.08 E-value=1.5 Score=45.64 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=30.0
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
..+|+|-|||-||+.+.+.|.+....||+|.|.
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~~~~ivaIndl 53 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFERGIDIVAINDL 53 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CeEEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 479999999999999999999999999999875
No 454
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=81.08 E-value=1.8 Score=42.89 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=30.4
Q ss_pred CCCCcEEEEEcc---ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF---GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf---GnVG~~~A~~L~e~GakVVaVs 310 (535)
+|+|++++|.|. |.+|+++|+.|++.|++|+.+.
T Consensus 6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGT 42 (315)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEE
T ss_pred cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEe
Confidence 378999999996 8999999999999999988753
No 455
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=81.04 E-value=2.3 Score=41.27 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=30.1
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
.+++++|.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIAS 49 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 58999999999999999988843
No 456
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=80.95 E-value=1.1 Score=45.70 Aligned_cols=32 Identities=22% Similarity=0.442 Sum_probs=28.9
Q ss_pred cEEEEEccccHHHHHHHHHHH-CCCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRR-GRAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e-~GakVVaVsD~ 312 (535)
.+|+|.|||.+|+.+++.|.+ .+..|++|.|.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~ 34 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT 34 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 489999999999999999987 57899999875
No 457
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=80.94 E-value=1.9 Score=41.13 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=30.5
Q ss_pred CCCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 276 PCMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 276 ~~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
.+++|+++.|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 50 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICA 50 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 4689999999985 8999999999999999988743
No 458
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.93 E-value=1.9 Score=41.18 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=29.0
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.|. |.+|+++|+.|.+.|++|+.+
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~ 37 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLI 37 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 367899999995 889999999999999999884
No 459
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=80.91 E-value=1.6 Score=42.38 Aligned_cols=31 Identities=13% Similarity=0.164 Sum_probs=28.2
Q ss_pred cEEEEEcc-ccHHHHHHHHHHHCCCeEEEEec
Q psy1913 281 KTYIVQGF-GNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 281 ~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD 311 (535)
++|.|.|. |-+|+++++.|.++|++|++++-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 47999997 99999999999999999999863
No 460
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=80.82 E-value=1.9 Score=41.80 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=29.8
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
.++++++.|.|. |-+|+++|+.|++.|++|+.+.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTA 59 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 478999999985 7899999999999999998843
No 461
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=80.74 E-value=1.6 Score=44.24 Aligned_cols=41 Identities=22% Similarity=0.249 Sum_probs=30.7
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCC--CeEEEEecCCceEeCC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGR--AKCLAIVEHDTAIVPD 319 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~G--akVVaVsD~~G~iynp 319 (535)
.||||+|+|.|..|..+|+.|.+.+ ++|+-|....-..|.|
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p 43 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY 43 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc
Confidence 4899999999999999999998755 5777664444444433
No 462
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=80.71 E-value=6.6 Score=38.34 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=28.5
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
.+++|.|.| .|-+|+++++.|.+.|++|+++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 36 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIAD 36 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 467999998 59999999999999999998854
No 463
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=80.71 E-value=2.2 Score=39.83 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=29.9
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
+++++++.|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~ 38 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITG 38 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 46889999998 58999999999999999998843
No 464
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=80.71 E-value=2 Score=39.77 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=29.2
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHC--CCeEEEEe
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRG--RAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~--GakVVaVs 310 (535)
+++++|.|.| .|.+|+++++.|.+. |++|++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4678999999 699999999999999 89999854
No 465
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=80.65 E-value=2.6 Score=40.62 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=30.2
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |-+|+++|+.|++.|++|+.+.
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 578999999985 7899999999999999988753
No 466
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.65 E-value=2.3 Score=40.97 Aligned_cols=46 Identities=24% Similarity=0.236 Sum_probs=36.5
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
+++++++.|.| .|.+|+++|+.|.+.|++|+.+. .+.+.+.+..++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~-------------r~~~~~~~~~~~ 49 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVD-------------REERLLAEAVAA 49 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-------------SCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe-------------CCHHHHHHHHHH
Confidence 36889999998 48899999999999999998843 555666655544
No 467
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=80.64 E-value=2 Score=40.79 Aligned_cols=32 Identities=22% Similarity=0.459 Sum_probs=27.6
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCe-EEEE
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAK-CLAI 309 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~Gak-VVaV 309 (535)
++|++|+|.| .|-+|+++|+.|++.|++ |+.+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~ 36 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVIL 36 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEE
Confidence 6789999998 588999999999999997 5543
No 468
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=80.63 E-value=2.4 Score=41.61 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=29.7
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~ 64 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFN 64 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999999884
No 469
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=80.49 E-value=2.9 Score=41.03 Aligned_cols=35 Identities=26% Similarity=0.206 Sum_probs=30.7
Q ss_pred CCCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 276 PCMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 276 ~~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
.+++|+++.|.|. |.+|+++|+.|++.|++|+.+.
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAID 59 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3578999999995 7899999999999999998754
No 470
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=80.46 E-value=1.3 Score=43.69 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=28.0
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++++|.|.| .|-+|+++++.|.+.|++|+++.
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~ 36 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATV 36 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEE
Confidence 678999999 79999999999999999998865
No 471
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=80.44 E-value=13 Score=38.26 Aligned_cols=31 Identities=23% Similarity=0.375 Sum_probs=27.7
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEec
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVE 311 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD 311 (535)
.+|+|=|||-+|+.+.|.+.+. ...||||-|
T Consensus 5 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaind 36 (338)
T 3lvf_P 5 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND 36 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCceEEEEec
Confidence 5899999999999999998876 578999987
No 472
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=80.42 E-value=1.7 Score=41.58 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=29.5
Q ss_pred CCCcEEEEEcc---ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQGF---GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQGf---GnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++.|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY 42 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEc
Confidence 67899999996 6999999999999999988753
No 473
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=80.34 E-value=1.7 Score=42.16 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=29.7
Q ss_pred CCCcEEEEEcc---ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQGF---GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQGf---GnVG~~~A~~L~e~GakVVaVs 310 (535)
++|+++.|.|. |.+|+++|+.|++.|++|+.+.
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTY 54 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEe
Confidence 68999999997 6999999999999999988754
No 474
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=80.25 E-value=2 Score=40.86 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=29.9
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++|.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 45 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA 45 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 46889999998 58999999999999999998843
No 475
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=80.23 E-value=2.7 Score=40.06 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=29.8
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
.+++++|.|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~ 46 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA 46 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999999884
No 476
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.20 E-value=2.7 Score=40.42 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=30.0
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|++|.|.|. |-+|+++|+.|++.|++|+.+.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 41 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFD 41 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 478999999995 7899999999999999988753
No 477
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=80.19 E-value=2.8 Score=41.75 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=55.9
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHHcCC-cccCCCCcc---cCC-CCccc
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKITKGT-IKGYPGTKS---APT-DIMFD 355 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~~g~-v~~~~~a~~---i~~-ell~~ 355 (535)
++|+|.|.|++|..+|..|. .|..|+.+. -+.+.+..+.+ .|- +.. ++... ++. +-...
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~-------------r~~~~~~~l~~-~G~~~~~-~~~~~~~~~~~~~~~~~ 66 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVT-------------RRQEQAAAIQS-EGIRLYK-GGEEFRADCSADTSINS 66 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEEC-------------SCHHHHHHHHH-HCEEEEE-TTEEEEECCEEESSCCS
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEE-------------CCHHHHHHHHh-CCceEec-CCCeecccccccccccC
Confidence 68999999999999999999 999887732 33344444443 332 221 12111 111 11235
Q ss_pred cceEEeeccccccccccccccc---cceEEEecCCCCCC
Q psy1913 356 KVDILVPAAIEKVIRKSNADKV---QAKIIVEAANGPLT 391 (535)
Q Consensus 356 ~~DILiPaA~~~~It~~na~~i---~AkiIvEgAN~p~T 391 (535)
++|++|-|.....+. +-++.+ ....|+-..||--.
T Consensus 67 ~~D~vilavK~~~~~-~~l~~l~~~~~~~ivs~~nGi~~ 104 (307)
T 3ego_A 67 DFDLLVVTVKQHQLQ-SVFSSLERIGKTNILFLQNGMGH 104 (307)
T ss_dssp CCSEEEECCCGGGHH-HHHHHTTSSCCCEEEECCSSSHH
T ss_pred CCCEEEEEeCHHHHH-HHHHHhhcCCCCeEEEecCCccH
Confidence 799999987655432 222222 22238888888743
No 478
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=80.18 E-value=2.4 Score=41.41 Aligned_cols=45 Identities=9% Similarity=0.060 Sum_probs=35.3
Q ss_pred CCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEecCCceEeCCCCCCCCHHHHHHHHHH
Q psy1913 278 MENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIVEHDTAIVPDKGTEINYKDLHTYKIT 335 (535)
Q Consensus 278 l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVsD~~G~iynp~G~dLDi~~L~~~~~~ 335 (535)
++++++.|.|. |.+|+++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~-------------~r~~~~~~~~~~~ 71 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGAL-------------GRTRTEVEEVADE 71 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEE-------------ESSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-------------eCCHHHHHHHHHH
Confidence 57899999984 789999999999999999883 3556666655544
No 479
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=80.09 E-value=2.2 Score=43.22 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=29.5
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEe
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVs 310 (535)
.|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~ 220 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEe
Confidence 58999999999999999999999999999843
No 480
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=80.08 E-value=1.2 Score=40.63 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=28.5
Q ss_pred CCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 279 ENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 279 ~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
.|++|.|.| .|.+|..+++.+...|++|+++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~ 69 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTT 69 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEE
Confidence 589999999 6999999999999999999884
No 481
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=80.08 E-value=1.8 Score=42.83 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=29.0
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
.+++++|.|.|. |.+|+++++.|.+.|++|+++.
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 58 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVD 58 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEe
Confidence 357899999996 9999999999999999999865
No 482
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=80.05 E-value=4 Score=40.52 Aligned_cols=33 Identities=30% Similarity=0.423 Sum_probs=28.9
Q ss_pred CCcEEEEEccccHHHHHHHHHHHCCCeEEEEec
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD 311 (535)
.|.+|+|+|.|.||..+++++...|++++.++|
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~ 192 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAID 192 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEe
Confidence 689999999999999999999999997655444
No 483
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=80.00 E-value=2.1 Score=42.01 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=29.2
Q ss_pred CCCCcEEEEEcc-cc--HHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GN--VGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-Gn--VG~~~A~~L~e~GakVVaV 309 (535)
.++|+++.|.|. |. +|+++|+.|++.|++|+.+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~ 63 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFT 63 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence 478999999997 45 9999999999999998874
No 484
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=79.98 E-value=1.4 Score=45.05 Aligned_cols=32 Identities=19% Similarity=0.358 Sum_probs=28.6
Q ss_pred cEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
.+|+|.|||.+|+.+++.|.+. +..|++|+|.
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~ 34 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT 34 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 4899999999999999999874 6899999885
No 485
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=79.95 E-value=3.1 Score=40.48 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=29.5
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLN 55 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 478999999984 789999999999999999873
No 486
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=79.79 E-value=1.7 Score=41.02 Aligned_cols=34 Identities=29% Similarity=0.335 Sum_probs=30.2
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++++++|.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 45 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIY 45 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence 46889999998 58999999999999999998864
No 487
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=79.79 E-value=1.3 Score=41.18 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=29.4
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCC--eEEEEe
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRA--KCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~Ga--kVVaVs 310 (535)
+++++|.|.| .|.+|+++++.|.+.|+ +|++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~ 51 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIG 51 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence 3578999999 69999999999999999 998865
No 488
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=79.76 E-value=2.1 Score=40.46 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=29.2
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEe
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVs 310 (535)
++|+++.|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 35 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNY 35 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 5789999998 58999999999999999998843
No 489
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=79.74 E-value=0.78 Score=44.84 Aligned_cols=29 Identities=7% Similarity=-0.131 Sum_probs=27.3
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEE
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLA 308 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVa 308 (535)
-++|.|+|.|++|..+|+.|.+.|..|++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~ 34 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTV 34 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEE
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEE
Confidence 46999999999999999999999999988
No 490
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=79.74 E-value=1.1 Score=46.99 Aligned_cols=35 Identities=14% Similarity=0.341 Sum_probs=31.3
Q ss_pred CCCcEEEEEccccHHHHHHHHHHHCCCeEEEEecCC
Q psy1913 278 MENKTYIVQGFGNVGFHAARYFRRGRAKCLAIVEHD 313 (535)
Q Consensus 278 l~g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~~ 313 (535)
+++++|.|.|.|..|..+|++|+++|++|++ +|++
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~-~D~~ 37 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRV-MDTR 37 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHTTTCCCEE-EESS
T ss_pred CCCCEEEEEeecHHHHHHHHHHHhCCCEEEE-EECC
Confidence 5789999999999999999999999999876 6653
No 491
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=79.71 E-value=2 Score=44.14 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=26.4
Q ss_pred CCCcEEEEEcc-ccHHHHHHHHHHHCCC--eEEE
Q psy1913 278 MENKTYIVQGF-GNVGFHAARYFRRGRA--KCLA 308 (535)
Q Consensus 278 l~g~~VaIQGf-GnVG~~~A~~L~e~Ga--kVVa 308 (535)
+.+++|+|.|. |.||+.+|..|...|. .|+-
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvL 39 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCL 39 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEE
Confidence 45789999997 9999999999999884 5655
No 492
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=79.70 E-value=2 Score=41.68 Aligned_cols=32 Identities=28% Similarity=0.322 Sum_probs=28.3
Q ss_pred CCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEE
Q psy1913 278 MENKTYIVQGF-GNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 278 l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaV 309 (535)
++++++.|.|. |.+|+++|+.|++.|++|+.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~ 34 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLG 34 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEE
Confidence 46889999985 789999999999999999884
No 493
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=79.64 E-value=2.8 Score=40.11 Aligned_cols=32 Identities=22% Similarity=0.206 Sum_probs=28.9
Q ss_pred CCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 278 MENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 278 l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
++++++.|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALV 37 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEE
Confidence 5789999998 4899999999999999999884
No 494
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=79.64 E-value=1.1 Score=44.35 Aligned_cols=31 Identities=35% Similarity=0.356 Sum_probs=27.3
Q ss_pred cEEEEEccccHHHHHHHHHHHCCCeEEEEecC
Q psy1913 281 KTYIVQGFGNVGFHAARYFRRGRAKCLAIVEH 312 (535)
Q Consensus 281 ~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD~ 312 (535)
-.|+|+|.|.+|..+|..|++.|.+|+. .|.
T Consensus 5 yDViIVGaGpaGl~~A~~La~~G~~V~v-~Er 35 (397)
T 3oz2_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLM-IEK 35 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEE-ECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEE-EeC
Confidence 4699999999999999999999999875 454
No 495
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=79.61 E-value=2 Score=37.03 Aligned_cols=34 Identities=24% Similarity=0.520 Sum_probs=30.0
Q ss_pred CCcEEEEEccccHHHHHHHHHHHC-CCeEEEEecC
Q psy1913 279 ENKTYIVQGFGNVGFHAARYFRRG-RAKCLAIVEH 312 (535)
Q Consensus 279 ~g~~VaIQGfGnVG~~~A~~L~e~-GakVVaVsD~ 312 (535)
+.++++|.|.|..|..+++.|.+. |++|+|+.|.
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 457999999999999999999875 8999998774
No 496
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=79.58 E-value=1.9 Score=42.61 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=29.3
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEEec
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaVsD 311 (535)
.+++++|.|.| .|.+|+++++.|.+.|++|+++.-
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 36789999998 699999999999999999998753
No 497
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=79.53 E-value=4.1 Score=40.23 Aligned_cols=29 Identities=21% Similarity=0.115 Sum_probs=26.3
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCC--eEEE
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRA--KCLA 308 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~Ga--kVVa 308 (535)
.++|+|.|.|+||..+|..|.+.|. .|+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l 37 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVL 37 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEE
Confidence 3689999999999999999999997 7776
No 498
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=79.47 E-value=11 Score=38.85 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=28.7
Q ss_pred CcEEEEEccccHHHHHHHHHHHCCCeEEEEec
Q psy1913 280 NKTYIVQGFGNVGFHAARYFRRGRAKCLAIVE 311 (535)
Q Consensus 280 g~~VaIQGfGnVG~~~A~~L~e~GakVVaVsD 311 (535)
.++|.|.|.|..|..+++.+.+.|.+|+++..
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~ 50 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQRLGVEVVAVDR 50 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 46999999999999999999999999988653
No 499
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.43 E-value=2.1 Score=41.40 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=29.2
Q ss_pred CCCCcEEEEEc-cccHHHHHHHHHHHCCCeEEEE
Q psy1913 277 CMENKTYIVQG-FGNVGFHAARYFRRGRAKCLAI 309 (535)
Q Consensus 277 ~l~g~~VaIQG-fGnVG~~~A~~L~e~GakVVaV 309 (535)
+++++++.|.| .|.+|+++|+.|++.|++|+.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 36 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTIT 36 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 36789999998 5889999999999999999884
No 500
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=79.36 E-value=2.5 Score=41.11 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=30.5
Q ss_pred CCCCcEEEEEcc-ccHHHHHHHHHHHCCCeEEEEe
Q psy1913 277 CMENKTYIVQGF-GNVGFHAARYFRRGRAKCLAIV 310 (535)
Q Consensus 277 ~l~g~~VaIQGf-GnVG~~~A~~L~e~GakVVaVs 310 (535)
+++|+++.|.|. |.+|+++|+.|++.|++|+.+.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 578999999995 7899999999999999998755
Done!