BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1915
(361 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2V4M|A Chain A, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|B Chain B, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|C Chain C, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|D Chain D, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
Length = 376
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 253/329 (76%), Gaps = 18/329 (5%)
Query: 51 IMEGAFALCFKSKLF--PGECVATRRGSPLLVGIKTKTRLATDHIPILY----------- 97
IM+G F+ + ++F P V T RG DHI +
Sbjct: 11 IMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRCRRLILIACG 70
Query: 98 -----GKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRY 152
G ATRQ+LEELTELPVMVELASDFLDRNTPVFRDDVCFF+SQSGETAD+LM LRY
Sbjct: 71 TSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMGLRY 130
Query: 153 CKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCED 212
CK RGAL VG+TNTVGSSISRE+ CG+HINAGPEIGVASTKAYTSQF+SLVMFAL+MC+D
Sbjct: 131 CKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFALMMCDD 190
Query: 213 RISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEG 272
RIS+Q RR EI+ GLK + + I+EVL MD E+Q+LA E+Y QKS+L+MGRGY+YATC+EG
Sbjct: 191 RISMQERRKEIMLGLKRLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGRGYHYATCLEG 250
Query: 273 ALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGR 332
ALKIKE+TYMHSEGI+AGELKHGPLAL+D MPVIMI+ RD Y KC NAL QV+AR GR
Sbjct: 251 ALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVVARQGR 310
Query: 333 PIVICEKGDTETQALATKTLEVPHTVDCL 361
P+VIC+K DTET +T++VPH+VDCL
Sbjct: 311 PVVICDKEDTETIKNTKRTIKVPHSVDCL 339
>pdb|2ZJ3|A Chain A, Isomerase Domain Of Human Glucose:fructose-6-Phosphate
Amidotransferase
pdb|2ZJ4|A Chain A, Isomerase Domain Of Human Glucose:fructose-6-Phosphate
Amidotransferase
Length = 375
Score = 433 bits (1114), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 253/329 (76%), Gaps = 18/329 (5%)
Query: 51 IMEGAFALCFKSKLF--PGECVATRRGSPLLVGIKTKTRLATDHIPILY----------- 97
IM+G F+ + ++F P V T RG DHI +
Sbjct: 10 IMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRCRRLILIACG 69
Query: 98 -----GKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRY 152
G ATRQ+LEELTELPVMVELASDFLDRNTPVFRDDVCFF+SQSGETAD+LM LRY
Sbjct: 70 TSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMGLRY 129
Query: 153 CKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCED 212
CK RGAL VG+TNTVGSSISRE+ CG+HINAGPEIGVASTKAYTSQF+SLVMFAL+MC+D
Sbjct: 130 CKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFALMMCDD 189
Query: 213 RISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEG 272
RIS+Q RR EI+ GLK + + I+EVL MD E+Q+LA E+Y QKS+L+MGRGY+YATC+EG
Sbjct: 190 RISMQERRKEIMLGLKRLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGRGYHYATCLEG 249
Query: 273 ALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGR 332
ALKIKE+TYMHSEGI+AGELKHGPLAL+D MPVIMI+ RD Y KC NAL QV+AR GR
Sbjct: 250 ALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVVARQGR 309
Query: 333 PIVICEKGDTETQALATKTLEVPHTVDCL 361
P+VIC+K DTET +T++VPH+VDCL
Sbjct: 310 PVVICDKEDTETIKNTKRTIKVPHSVDCL 338
>pdb|2POC|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUW|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-phosphate Synthase From Candida Albicans
pdb|2PUW|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-phosphate Synthase From Candida Albicans
Length = 367
Score = 355 bits (910), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 168/264 (63%), Positives = 214/264 (81%), Gaps = 2/264 (0%)
Query: 100 ATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYCKARGAL 159
ATR + EELTE+PV VELASDFLDR +PVFRDD C F+SQSGETADS++AL+YC RGAL
Sbjct: 67 ATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGAL 126
Query: 160 IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTR 219
VG+ N+VGSS+SR++HCG+HINAGPEIGVASTKAYTSQ+I+LVMFAL + D IS + R
Sbjct: 127 TVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGR 186
Query: 220 RNEIIKGLKVIHEQIREVLQMDSEVQQLAK-EMYEQKSMLLMGRGYNYATCMEGALKIKE 278
EIIKGL+ I EQI++VL+++++++ L + +QKS+LL+GRGY +AT +EGALKIKE
Sbjct: 187 HEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKE 246
Query: 279 LTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICE 338
++YMHSEG++AGELKHG LAL+D +P+I TRD ++ K M+A+ QV ARDGRPIVIC
Sbjct: 247 ISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICN 306
Query: 339 KGDT-ETQALATKTLEVPHTVDCL 361
+GD + TLEVP TVDCL
Sbjct: 307 EGDAIISNDKVHTTLEVPETVDCL 330
>pdb|1JXA|A Chain A, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|1JXA|B Chain B, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|1JXA|C Chain C, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|2BPL|A Chain A, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
pdb|2BPL|B Chain B, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
pdb|2BPL|C Chain C, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
Length = 608
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 160/279 (57%), Gaps = 8/279 (2%)
Query: 91 DHIPIL-------YGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGET 143
+HI IL G +R E L +P VE+AS+F R + V R+ + +SQSGET
Sbjct: 293 EHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGET 352
Query: 144 ADSLMALRYCKARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISL 202
AD+L LR K G L + + N GSS+ RES + NAG EIGVASTKA+T+Q L
Sbjct: 353 ADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVL 412
Query: 203 VMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGR 262
+M + + + + ++I+ GL+ + +I ++L D ++ LA++ ++ L +GR
Sbjct: 413 LMLVAKLSKLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGR 472
Query: 263 GYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNA 322
G Y +EGALK+KE++Y+H+E AGELKHGPLALID MPVI++ + + K +
Sbjct: 473 GDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSN 532
Query: 323 LLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDCL 361
+ +V AR G+ V ++ + +E+PH + +
Sbjct: 533 IEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVI 571
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 47 RHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKT-KTRLATDHIPIL 96
R I + GA+ P +A R GSPL++G+ + +A+D + +L
Sbjct: 147 RAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALL 197
>pdb|2J6H|A Chain A, E. Coli Glucosamine-6-p Synthase In Complex With
Glucose-6p And 5-oxo-l-norleucine
pdb|2J6H|B Chain B, E. Coli Glucosamine-6-p Synthase In Complex With
Glucose-6p And 5-oxo-l-norleucine
pdb|2VF4|X Chain X, E. Coli Glucosamine-6-P Synthase
pdb|2VF5|X Chain X, Glucosamine-6-Phosphate Synthase In Complex With
Glucosamine-6-Phosphate
Length = 608
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 159/279 (56%), Gaps = 8/279 (2%)
Query: 91 DHIPIL-------YGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGET 143
+HI IL G +R E L +P VE+AS+F R + V R+ + +SQSGET
Sbjct: 293 EHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGET 352
Query: 144 ADSLMALRYCKARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISL 202
AD+L LR K G L + + N GSS+ RES + NAG EIGVASTKA+T+Q L
Sbjct: 353 ADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVL 412
Query: 203 VMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGR 262
+M + + + ++I+ GL+ + +I ++L D ++ LA++ ++ L +GR
Sbjct: 413 LMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGR 472
Query: 263 GYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNA 322
G Y +EGALK+KE++Y+H+E AGELKHGPLALID MPVI++ + + K +
Sbjct: 473 GDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSN 532
Query: 323 LLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDCL 361
+ +V AR G+ V ++ + +E+PH + +
Sbjct: 533 IEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVI 571
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 47 RHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKT-KTRLATDHIPIL 96
R I + GA+ P +A R GSPL++G+ + +A+D + +L
Sbjct: 147 RAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALL 197
>pdb|3OOJ|A Chain A, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|B Chain B, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|C Chain C, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|D Chain D, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|E Chain E, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|F Chain F, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|G Chain G, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|H Chain H, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
Length = 608
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 159/279 (56%), Gaps = 8/279 (2%)
Query: 91 DHIPIL-------YGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGET 143
+HI IL G +R E L +P VE+AS+F R + V R+ + +SQSGET
Sbjct: 293 EHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGET 352
Query: 144 ADSLMALRYCKARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISL 202
AD+L LR K G L + + N GSS+ RES + NAG EIGVASTKA+T+Q L
Sbjct: 353 ADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVL 412
Query: 203 VMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGR 262
+M + + + ++I+ GL+ + +I ++L D ++ LA++ ++ L +GR
Sbjct: 413 LMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGR 472
Query: 263 GYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNA 322
G Y +EGALK+KE++Y+H+E AGELKHGPLALID MPVI++ + + K +
Sbjct: 473 GDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSN 532
Query: 323 LLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDCL 361
+ +V AR G+ V ++ + +E+PH + +
Sbjct: 533 IEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVI 571
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 47 RHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKT-KTRLATDHIPIL 96
R I + GA+ P +A R GSPL++G+ + +A+D + +L
Sbjct: 147 RAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALL 197
>pdb|1MOS|A Chain A, Isomerase Domain Of Glucosamine 6-phosphate Synthase
Complexed With 2- Amino-2-deoxyglucitol 6-phosphate
pdb|1MOQ|A Chain A, Isomerase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glucosamine 6-Phosphate
pdb|1MOR|A Chain A, Isomerase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glucose 6-Phosphate
Length = 368
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 159/279 (56%), Gaps = 8/279 (2%)
Query: 91 DHIPIL-------YGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGET 143
+HI IL G +R E L +P VE+AS+F R + V R+ + +SQSGET
Sbjct: 53 EHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGET 112
Query: 144 ADSLMALRYCKARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISL 202
AD+L LR K G L + + N GSS+ RES + NAG EIGVASTKA+T+Q L
Sbjct: 113 ADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVL 172
Query: 203 VMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGR 262
+M + + + ++I+ GL+ + +I ++L D ++ LA++ ++ L +GR
Sbjct: 173 LMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGR 232
Query: 263 GYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNA 322
G Y +EGALK+KE++Y+H+E AGELKHGPLALID MPVI++ + + K +
Sbjct: 233 GDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSN 292
Query: 323 LLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDCL 361
+ +V AR G+ V ++ + +E+PH + +
Sbjct: 293 IEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVI 331
>pdb|3TBF|A Chain A, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|B Chain B, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|C Chain C, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|D Chain D, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|E Chain E, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|F Chain F, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|G Chain G, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|H Chain H, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis
Length = 372
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 151/250 (60%), Gaps = 6/250 (2%)
Query: 98 GKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYCKARG 157
G + +E+ ++P VE+AS+ R+ V + ISQSGETAD+L +LR K +
Sbjct: 69 GXTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQN 128
Query: 158 ALIVG---VTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRI 214
VG + N SS+ RES AG EIGVASTKA+T+Q ++L +F LV+ + +
Sbjct: 129 --YVGSXCICNVPNSSLVRESDIAFXTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKN 186
Query: 215 SLQTRR-NEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGA 273
SL ++ + + LK I + L++D+E+ Q+++ +++ + +GRG Y +EGA
Sbjct: 187 SLTDQQIAKYTEELKNIRALVXGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGA 246
Query: 274 LKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGRP 333
LK+KE++Y+H+E +GELKHGPLAL+D + P++ ++ D + K ++ L +V AR G+
Sbjct: 247 LKLKEISYIHAEAYPSGELKHGPLALVDKNXPIVAVVPNDELLDKTLSNLQEVHARGGKL 306
Query: 334 IVICEKGDTE 343
I+ +K E
Sbjct: 307 ILFVDKAVKE 316
>pdb|3HBA|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Sden_2705) From Shewanella Denitrificans Os217 At 2.00
A Resolution
pdb|3HBA|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Sden_2705) From Shewanella Denitrificans Os217 At 2.00
A Resolution
Length = 334
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 133 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVAST 192
+ ISQSG + D L R K GA V + N + I I + AG E VA+T
Sbjct: 93 LVIVISQSGRSPDILAQARXAKNAGAFCVALVNDETAPIKDIVDVVIPLRAGEEKAVAAT 152
Query: 193 KAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMY 252
K+Y + +L+ A ++ SL N + + L+ +D+E Q A +
Sbjct: 153 KSYLATLSALLQVAAKWTQNE-SLVEAVNSLPQALQA---------AVDAEPQLRAGSLT 202
Query: 253 EQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTR 312
+ K+++++GRG+ YA E ALK+KE+ +H+E + E HGP+ L++ + ++ + R
Sbjct: 203 DVKNLVVLGRGFGYAVSKEIALKLKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILDVCIR 262
Query: 313 DPVY 316
D Y
Sbjct: 263 DESY 266
>pdb|3FJ1|A Chain A, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|B Chain B, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|C Chain C, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|D Chain D, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
Length = 344
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 133 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVAST 192
+C +SQSG++ D + R GAL V +TN S ++ S I I+AGPE+ VA+T
Sbjct: 94 LCLAVSQSGKSPDIVAXTRNAGRDGALCVALTNDAASPLAGVSAHTIDIHAGPELSVAAT 153
Query: 193 KAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQ--QLAKE 250
K + + ++ + ED GL+ + E L S + +
Sbjct: 154 KTFVTSAVAGLXLLADWAED------------DGLRAALGNLPETLAAASRIDWPEXRVA 201
Query: 251 MYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMIL 310
+ + S+ +GRG + A E ALK KE +H+E + E+ HGP+++++ PV+
Sbjct: 202 IGARPSLFTLGRGTSLAVSNEAALKFKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGFA 261
Query: 311 TRDPVYVKCMNALLQVIAR 329
D Q+ A+
Sbjct: 262 AGDAAEAPLAEIADQIAAK 280
>pdb|3EUA|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|C Chain C, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|D Chain D, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|E Chain E, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|F Chain F, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|G Chain G, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|H Chain H, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
Length = 329
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 118 ASDFLDRNTPVFRDDVCFFI--SQSGETADSLMALRYCKARGALIVGVTNTVGSSISRES 175
A++F+ RN PV + I S SG T +++ A + + +GAL + T S +++E+
Sbjct: 61 ANEFIQRN-PVQLGEKSLVILCSHSGNTPETVKAAAFARGKGALTIAXTFKPESPLAQEA 119
Query: 176 HCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIR 235
+ G E +T +V L + E+ T+ + I+GL +
Sbjct: 120 QYVAQYDWGDEALAINTN--YGVLYQIVFGTLQVLENN----TKFEQAIEGLDQLQAVYE 173
Query: 236 EVLQMDSE-VQQLAKEMYEQKSMLL-------MGRGYNYATCMEGALKIKELTYMHSEGI 287
+ L+ +++ +Q AK +E++S++ G Y+Y+ C+ + E ++HS I
Sbjct: 174 KALKQEADNAKQFAK-AHEKESIIYTXASGANYGVAYSYSICI-----LXEXQWIHSHAI 227
Query: 288 MAGELKHGPLALIDNSMPVIMILTRD 313
AGE HGP +ID S+P I++L D
Sbjct: 228 HAGEYFHGPFEIIDESVPFIILLGLD 253
>pdb|2A3N|A Chain A, Crystal Structure Of A Putative
Glucosamine-fructose-6-phosphate Aminotransferase
(stm4540.s) From Salmonella Typhimurium Lt2 At 1.35 A
Resolution
Length = 355
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 100 ATRQLLEELTELPVMVELASDFLDR-NTPVFRDDVCFFISQSGETADSLMALRYCKARGA 158
A + +ELT LPV VE A++ + + N + +D V +S+SG+T +S+ +CKA+G
Sbjct: 71 AINEFAKELTTLPVYVEQAAELIHKGNKRLNKDSVVITLSKSGDTKESVAIAEWCKAQGI 130
Query: 159 LIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQT 218
+V +T S +++ + HI + GV Y + + F ++ + +
Sbjct: 131 RVVAITKNADSPLAQAATW--HIPXRHKNGV----EYEYXLLYWLFFRVLSRNNEFASYD 184
Query: 219 RRNEIIKGLKVIHEQIREVLQ-MDSEVQQLAKEMYEQKSMLLMGRG------YNYATCME 271
R L+++ + + Q D + +A + +G Y ++ C+
Sbjct: 185 R---FASQLEILPANLLKAKQKFDPQADAIASRYHNSDYXXWVGGAEXWGEVYLFSXCI- 240
Query: 272 GALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 309
++E + + + + E HG L L++ +P+I++
Sbjct: 241 ----LEEXQWKRTRPVSSAEFFHGALELLEKDVPLILV 274
>pdb|3FKJ|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Stm_0572) From Salmonella Typhimurium Lt2 At 2.12 A
Resolution
pdb|3FKJ|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Stm_0572) From Salmonella Typhimurium Lt2 At 2.12 A
Resolution
Length = 347
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 107 ELTELPVMVELASDFLDRNTP--VFRDDVCFFISQSGETADSLMALRYCKARGALIVGVT 164
E ++L V +++F+ TP + ++ V SQ G TA+++ A R + +GA +G+
Sbjct: 65 EASKLAVGYITSNEFV-HATPKALGKNSVVILASQQGNTAETVAAARVAREKGAATIGLV 123
Query: 165 NTVGSSISRESHCGIHINAG--PE-IGVASTKAYTSQFISLVMFA----LVMCEDRISLQ 217
+ + S I PE + A KA S +++L + A ++ +S
Sbjct: 124 YQPDTPLCEYSDYIIEYQWARYPETVDPAQQKAAYSLWLALEILAQTEGYAQYDELVSAF 183
Query: 218 TRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKI- 276
R ++++ G + Q+ + Q+ A E ++K + G G ++ + ++ I
Sbjct: 184 GRFSDVVHGAQ---------RQVQEDAQRFAAEWKDEKVVYXXGSGPSFGAAHQESICIL 234
Query: 277 KELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 309
E +++S I +GE HGP + + P I++
Sbjct: 235 LEXQWINSASIHSGEYFHGPFEITEPGTPFILL 267
>pdb|2DEC|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DEC|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DF8|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With
Beta-D-Fructopyranose-1-Phosphate
pdb|2DF8|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With
Beta-D-Fructopyranose-1-Phosphate
pdb|2E5F|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With Phosphate Ion
pdb|2E5F|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With Phosphate Ion
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 119 SDFL--DRNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESH 176
S+FL P+ ++ IS+SGET + L+AL + +G+T T SS++R
Sbjct: 66 SEFLYSKETYPIGEVELAVGISRSGETTEILLALEKINVKK---LGIT-TRESSLTRMCD 121
Query: 177 CGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHE-QIR 235
+ + A E V T ++TS + + LQ R GL ++ +I
Sbjct: 122 YSLVVPAIEE-SVVMTHSFTSFYFAY-------------LQLLRYSY--GLPPLNAGEIS 165
Query: 236 EVLQMDSEVQQLAKEMYEQ---KSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGEL 292
+ + E ++ +E+ E ++++ +G G Y +E +LK+KE++ SE E+
Sbjct: 166 KATEKSLEYERYIREIVESFDFQNIIFLGSGLLYPVALEASLKMKEMSIFWSEAYPTFEV 225
Query: 293 KHGPLALIDNSMPVIMIL 310
+HG A+ D V++++
Sbjct: 226 RHGFKAIADEKTLVVLMV 243
>pdb|3G68|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(cd3275) From Clostridium Difficile 630 At 1.80 A
Resolution
pdb|3G68|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(cd3275) From Clostridium Difficile 630 At 1.80 A
Resolution
Length = 352
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 137 ISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYT 196
+SQ G + + A + + +G I + I S + +N G E A TK Y
Sbjct: 89 VSQGGSSYSTYNAXKLAEDKGCKIASXAGCKNALIDEISDYILTVNCGEEKSGAKTKGYY 148
Query: 197 SQFISLVMFALVMCEDR--ISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKE-MYE 253
++L + L + ++ IS + EI K L I+ + V ++ + + KE +
Sbjct: 149 CTKLNLXLLGLQIAREKGIISSEKYNEEINKILDAIN-RFEAVYKLSKQWIERNKEKLVN 207
Query: 254 QKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILT-- 311
K + ++G Y +E ALK+ E + G E HG I NS I IL
Sbjct: 208 SKEIRIIGHSDIYGDTLEAALKLLETXRIPVTGYEFEEFIHGIYNAI-NSDSTIFILDTG 266
Query: 312 RDPVYVKCMNAL 323
++P K ++ L
Sbjct: 267 KEPRVTKXIDVL 278
>pdb|2AML|A Chain A, Crystal Structure Of Lmo0035 Protein (46906266) From
Listeria Monocytogenes 4b F2365 At 1.50 A Resolution
pdb|2AML|B Chain B, Crystal Structure Of Lmo0035 Protein (46906266) From
Listeria Monocytogenes 4b F2365 At 1.50 A Resolution
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 3/221 (1%)
Query: 98 GKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYCKARG 157
++ + +E L ++ + +E + L D+ ISQSG++ ++ AL K
Sbjct: 65 AQSAKYYIENLADVRITIEEPFNHLYYEKLSSHLDLVIGISQSGQSTSTISALERVKKEA 124
Query: 158 AL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISL 216
++ +V +T+ V S I+ + + I +G E TK +T+ ++L + L + +
Sbjct: 125 SVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLXLTGLHFAYKTVQI 184
Query: 217 QTRR--NEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGAL 274
R NEI + I + + ++ ++ +E +G G TC E
Sbjct: 185 DETRFNNEISAFSRAIDAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCKEFET 244
Query: 275 KIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPV 315
K E + S+G+ HGP ++ + + T V
Sbjct: 245 KFSETVRVPSQGLDLEAFXHGPYLEVNPQHRIFFLETASAV 285
>pdb|2CB0|A Chain A, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
From Pyrococcus Furiosus
pdb|2CB0|B Chain B, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
From Pyrococcus Furiosus
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 119 SDFL--DRNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESH 176
S+FL P+ + ++ IS+SGET + L+AL +G++ SS++R
Sbjct: 66 SEFLYSKEAYPIGKPELVVGISRSGETTEVLLALEKINTPK---LGIS-AYESSLTRACD 121
Query: 177 CGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHE-QIR 235
+ + E V T ++T+ + + LQ R+ GL ++ ++
Sbjct: 122 YSLVVPTIEE-SVVXTHSFTAFYFAY-------------LQLLRHSY--GLPLLEATEVA 165
Query: 236 EVLQMDSEVQQLAKEMYEQ---KSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGEL 292
+ + E + KE+ E ++++ +G G Y +E +LK KE SE E+
Sbjct: 166 KATEKALEYENYIKEIVEDFDFQNVIFLGSGLLYPVALEASLKXKEXAIFWSEAYPTFEV 225
Query: 293 KHGPLALIDNSMPVIM 308
+HG A+ D + V++
Sbjct: 226 RHGFKAIADENTLVVL 241
>pdb|3FXA|A Chain A, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|B Chain B, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|C Chain C, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|D Chain D, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
Length = 201
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 98 GKATRQLLEELT--ELPVMVELASDFLDRNTPVF-RDDVCFFISQSGETADSLMALRYCK 154
G A ++L+ E P + SD + V ++D+ IS+ G T + L + CK
Sbjct: 57 GVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACK 116
Query: 155 ARGALIVGVTNTVGSSISRESHCGIHINAGPE------IGVASTKAYTSQFISLVMFALV 208
+G+ ++GVT S I++E+ ++ E + AST A + F A++
Sbjct: 117 TKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNXLATASTXAVIASF-----DAVI 171
Query: 209 MCEDRISLQTRRNEIIKGLKVIH 231
+C L T N + VIH
Sbjct: 172 VC-----LXTYXNYTKEQFSVIH 189
>pdb|3KNZ|A Chain A, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|B Chain B, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|C Chain C, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|D Chain D, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|E Chain E, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|F Chain F, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
Length = 366
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 2/161 (1%)
Query: 137 ISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAY- 195
ISQ G + +L A + G + ++I R + + + G E A TK Y
Sbjct: 104 ISQGGGSLSTLAAXERARNVGHITASXAGVAPATIDRAADYILTVPCGEETAGAKTKGYH 163
Query: 196 -TSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQ 254
T + L+ A+ + R+ + RR+ +++ K + V + Q A + +
Sbjct: 164 CTVLNLXLLALAVAGQQQRLDGEQRRSLLLRXEKTFNHLPALVTASQAWAQTNALALRDS 223
Query: 255 KSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHG 295
+ L G + T EGALK E G E HG
Sbjct: 224 ADIRLTGPATLFGTVQEGALKXLETLRCPVSGYEFEEFIHG 264
>pdb|1NRI|A Chain A, Crystal Structure Of Putative Phosphosugar Isomerase
Hi0754 From Haemophilus Influenzae
Length = 306
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 130 RDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEI-- 187
++DV I+ SG T + L+Y K+ GAL + + + S + + I GPEI
Sbjct: 140 KNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEXAEIADIAIETIVGPEILT 199
Query: 188 GVASTKAYTSQ 198
G + K+ T+Q
Sbjct: 200 GSSRLKSGTAQ 210
>pdb|1J5X|A Chain A, Crystal Structure Of Glucosamine-6-Phosphate Deaminase
(Tm0813) From Thermotoga Maritima At 1.8 A Resolution
Length = 342
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 133 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVAST 192
+ F S++G T + L+A K R +G+T S +++ES + E + T
Sbjct: 103 LAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFPVREE-AIVXT 161
Query: 193 KAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAK--- 249
K+++ +SL A D+I+ + E+ E++ E ++
Sbjct: 162 KSFSXILLSLXFLA-----DKIAGNST------------ERFSELVGYSPEFFDISWKVI 204
Query: 250 ---EMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALI 300
++ E + +G + +E ALK E + SE E +HGP AL+
Sbjct: 205 EKIDLKEHDHFVFLGXSEFFGVSLESALKCIEXSLTFSEAYSTLEYRHGPKALV 258
>pdb|4FCV|A Chain A, Crystal Structure Of The C-Terminal Domain Of Clpb
pdb|4FCV|B Chain B, Crystal Structure Of The C-Terminal Domain Of Clpb
pdb|4FCV|C Chain C, Crystal Structure Of The C-Terminal Domain Of Clpb
pdb|4FCW|A Chain A, Crystal Structure Of The C-Terminal Domain Of Clpb
pdb|4FCW|C Chain C, Crystal Structure Of The C-Terminal Domain Of Clpb
pdb|4FCW|F Chain F, Crystal Structure Of The C-Terminal Domain Of Clpb
Length = 311
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 193 KAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEV-------Q 245
K + + I +F ++ R R +EI+ + EQIR+++++ +
Sbjct: 180 KGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQXSYLRARLAEK 239
Query: 246 QLAKEMYEQKSMLLMGRGYNYATCMEGALKI--KELTYMHSEGIMAGELKHGPLALID 301
+++ E+ E L RGY+ ++ +EL ++ I+AGE+K G +D
Sbjct: 240 RISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVD 297
>pdb|3ODP|A Chain A, Crystal Structure Of A Putative Tagatose-6-Phosphate
KetoseALDOSE Isomerase (Nt01cx_0292) From Clostridium
Novyi Nt At 2.35 A Resolution
Length = 393
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
Query: 188 GVASTKAYTSQFIS-LVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEV-Q 245
G A T ++++ +S L++F L E I K ++ I Q +VL + E+ +
Sbjct: 174 GFAXTGSFSTXLLSCLLIFNLDKLE----------SIGKQIESISXQGEKVLVNNVELXK 223
Query: 246 QLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGEL--KHGPLALIDNS 303
++ E + K + +G + E ALK+ ELT + L +HGP ++ID+
Sbjct: 224 KIVGEKF--KRTVYLGAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSIIDDE 281
Query: 304 MPVIMILTRD 313
+++ + D
Sbjct: 282 TLIVIFFSND 291
>pdb|3C3J|A Chain A, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|B Chain B, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|C Chain C, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|D Chain D, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|E Chain E, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|F Chain F, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
Length = 384
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 21/151 (13%)
Query: 188 GVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQL 247
G A T + T+ S + V + I+ QT R+ + ++ + +L + +
Sbjct: 169 GFAXTSSITTXXASCLA---VFAPETINSQTFRD--------VADRCQAILTSLGDFSEG 217
Query: 248 AKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAG------ELKHGPLALID 301
K ++ +G G E ALK+ ELT G +A +HGP +L+D
Sbjct: 218 VFGYAPWKRIVYLGSGGLQGAARESALKVLELT----AGKLAAFYDSPTGFRHGPKSLVD 273
Query: 302 NSMPVIMILTRDPVYVKCMNALLQVIARDGR 332
+ V++ ++ P + LL + RD +
Sbjct: 274 DETLVVVFVSSHPYTRQYDLDLLAELRRDNQ 304
>pdb|4FCT|A Chain A, Crystal Structure Of The C-Terminal Domain Of Clpb
pdb|4FD2|A Chain A, Crystal Structure Of The C-Terminal Domain Of Clpb
pdb|4FD2|B Chain B, Crystal Structure Of The C-Terminal Domain Of Clpb
pdb|4FD2|D Chain D, Crystal Structure Of The C-Terminal Domain Of Clpb
Length = 308
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 193 KAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEV-------Q 245
K + + I +F ++ R R +EI+ + EQIR+++++ +
Sbjct: 177 KGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEK 236
Query: 246 QLAKEMYEQKSMLLMGRGYNYATCMEGALKI--KELTYMHSEGIMAGELKHGPLALID 301
+++ E+ E L RGY+ ++ +EL ++ I+AGE+K G +D
Sbjct: 237 RISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVD 294
>pdb|1XFF|A Chain A, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glutamate
pdb|1XFF|B Chain B, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glutamate
pdb|1XFG|A Chain A, Glutaminase Domain Of Glucosamine 6-phosphate Synthase
Complexed With L-glu Hydroxamate
pdb|1XFG|B Chain B, Glutaminase Domain Of Glucosamine 6-phosphate Synthase
Complexed With L-glu Hydroxamate
Length = 240
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 47 RHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKT-KTRLATDHIPIL 96
R I + GA+ P +A R GSPL++G+ + +A+D + +L
Sbjct: 147 RAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALL 197
>pdb|1QVR|A Chain A, Crystal Structure Analysis Of Clpb
pdb|1QVR|B Chain B, Crystal Structure Analysis Of Clpb
pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb
Length = 854
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 193 KAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEV-------Q 245
K + + I +F ++ R R +EI+ + EQIR+++++ +
Sbjct: 721 KGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEK 780
Query: 246 QLAKEMYEQKSMLLMGRGYNYATCMEGALKI--KELTYMHSEGIMAGELKHGPLALID 301
+++ E+ E L RGY+ ++ +EL ++ I+AGE+K G +D
Sbjct: 781 RISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVD 838
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,201,168
Number of Sequences: 62578
Number of extensions: 337576
Number of successful extensions: 899
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 848
Number of HSP's gapped (non-prelim): 36
length of query: 361
length of database: 14,973,337
effective HSP length: 100
effective length of query: 261
effective length of database: 8,715,537
effective search space: 2274755157
effective search space used: 2274755157
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)