Query psy1915
Match_columns 361
No_of_seqs 311 out of 2686
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 19:32:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1915.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1915hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbf_A Glucosamine--fructose-6 100.0 9.1E-52 3.1E-56 399.0 28.5 308 44-360 13-334 (372)
2 2zj3_A Glucosamine--fructose-6 100.0 9.7E-49 3.3E-53 378.7 31.8 280 73-361 59-338 (375)
3 2poc_A D-fructose-6- PH, isome 100.0 2.8E-48 9.6E-53 374.5 28.3 279 73-360 49-329 (367)
4 3g68_A Putative phosphosugar i 100.0 4.1E-48 1.4E-52 371.0 28.8 270 72-357 32-304 (352)
5 3knz_A Putative sugar binding 100.0 2.4E-48 8.3E-53 373.9 23.1 269 73-357 49-319 (366)
6 1moq_A Glucosamine 6-phosphate 100.0 1.1E-47 3.7E-52 370.7 26.5 280 72-360 50-330 (368)
7 3fj1_A Putative phosphosugar i 100.0 9.2E-48 3.2E-52 367.4 23.5 250 73-341 42-292 (344)
8 3hba_A Putative phosphosugar i 100.0 4.5E-47 1.5E-51 361.0 25.1 249 73-340 41-290 (334)
9 2aml_A SIS domain protein; 469 100.0 1.8E-45 6E-50 355.6 32.0 272 74-359 50-325 (373)
10 2bpl_A Glucosamine--fructose-6 100.0 1.3E-44 4.3E-49 370.1 30.3 308 44-360 251-570 (608)
11 3odp_A Putative tagatose-6-pho 100.0 3.3E-45 1.1E-49 354.8 17.5 262 74-355 58-336 (393)
12 3fkj_A Putative phosphosugar i 100.0 5.4E-44 1.9E-48 341.6 25.7 249 75-338 41-296 (347)
13 3eua_A Putative fructose-amino 100.0 6E-44 2E-48 339.3 23.2 249 75-338 26-278 (329)
14 1j5x_A Glucosamine-6-phosphate 100.0 3.2E-43 1.1E-47 336.1 24.9 273 44-339 15-296 (342)
15 2e5f_A Hypothetical protein PH 100.0 1.1E-43 3.8E-48 337.1 21.3 257 72-360 29-288 (325)
16 3i0z_A Putative tagatose-6-pho 100.0 4.1E-44 1.4E-48 346.7 15.2 244 75-340 57-321 (389)
17 2a3n_A Putative glucosamine-fr 100.0 1.8E-41 6.2E-46 325.6 24.8 249 74-340 54-305 (355)
18 3c3j_A Putative tagatose-6-pho 100.0 1.1E-40 3.8E-45 323.3 9.4 258 75-356 54-329 (384)
19 1tzb_A Glucose-6-phosphate iso 100.0 8.7E-34 3E-38 266.4 13.7 224 73-339 36-262 (302)
20 2xhz_A KDSD, YRBH, arabinose 5 99.8 1.9E-19 6.3E-24 156.2 8.4 127 75-211 50-180 (183)
21 3sho_A Transcriptional regulat 99.8 6.7E-19 2.3E-23 153.2 12.0 127 74-213 39-167 (187)
22 3etn_A Putative phosphosugar i 99.8 9.9E-19 3.4E-23 156.4 13.0 131 74-214 59-195 (220)
23 3fxa_A SIS domain protein; str 99.8 4.8E-19 1.7E-23 156.0 9.2 130 75-214 46-179 (201)
24 1vim_A Hypothetical protein AF 99.7 1.6E-17 5.4E-22 146.4 13.2 125 74-212 47-180 (200)
25 1m3s_A Hypothetical protein YC 99.7 1.7E-17 5.7E-22 144.3 11.5 126 74-213 37-171 (186)
26 1jeo_A MJ1247, hypothetical pr 99.7 5.4E-17 1.9E-21 140.2 13.1 125 74-214 40-166 (180)
27 1nri_A Hypothetical protein HI 99.7 4.5E-17 1.5E-21 152.7 13.5 152 44-212 49-224 (306)
28 1x92_A APC5045, phosphoheptose 99.7 5.1E-17 1.7E-21 142.8 10.9 123 74-210 45-191 (199)
29 2yva_A DNAA initiator-associat 99.7 5.3E-16 1.8E-20 135.8 12.2 121 74-210 41-187 (196)
30 3trj_A Phosphoheptose isomeras 99.6 1.2E-15 3.9E-20 134.5 11.7 127 74-209 46-191 (201)
31 2i2w_A Phosphoheptose isomeras 99.6 4.4E-16 1.5E-20 138.3 8.9 110 73-186 63-187 (212)
32 2xbl_A Phosphoheptose isomeras 99.6 2.8E-15 9.6E-20 131.3 10.6 123 74-209 48-190 (198)
33 3cvj_A Putative phosphoheptose 99.6 4.2E-15 1.4E-19 134.7 11.2 84 126-210 104-208 (243)
34 1tk9_A Phosphoheptose isomeras 99.6 1E-14 3.5E-19 126.6 10.7 108 74-185 42-165 (188)
35 3fxa_A SIS domain protein; str 99.5 3.1E-13 1.1E-17 118.7 12.5 117 241-359 31-148 (201)
36 3etn_A Putative phosphosugar i 99.5 7.9E-13 2.7E-17 117.9 14.0 117 241-359 41-164 (220)
37 3hba_A Putative phosphosugar i 99.4 3.1E-12 1.1E-16 121.1 14.9 136 224-360 9-147 (334)
38 3fj1_A Putative phosphosugar i 99.4 3.8E-12 1.3E-16 121.0 14.6 136 224-360 10-148 (344)
39 3sho_A Transcriptional regulat 99.4 7.6E-12 2.6E-16 108.3 13.5 116 241-358 26-142 (187)
40 1m3s_A Hypothetical protein YC 99.4 1E-11 3.5E-16 107.4 14.3 112 241-359 24-135 (186)
41 2xhz_A KDSD, YRBH, arabinose 5 99.3 7.1E-12 2.4E-16 108.1 12.5 128 229-358 22-151 (183)
42 3eua_A Putative fructose-amino 99.3 3.8E-12 1.3E-16 120.3 10.9 121 239-360 8-131 (329)
43 2a3n_A Putative glucosamine-fr 99.3 2.3E-11 8E-16 116.1 13.8 117 241-358 39-157 (355)
44 3knz_A Putative sugar binding 99.3 1.8E-11 6.2E-16 117.2 12.9 134 224-359 17-153 (366)
45 3fkj_A Putative phosphosugar i 99.3 1.1E-11 3.9E-16 117.8 11.1 115 242-357 25-143 (347)
46 3g68_A Putative phosphosugar i 99.3 1.4E-11 4.7E-16 117.5 11.6 134 224-360 5-139 (352)
47 2i2w_A Phosphoheptose isomeras 99.3 1.3E-11 4.6E-16 109.2 10.7 112 245-358 55-186 (212)
48 2bpl_A Glucosamine--fructose-6 99.3 1.9E-11 6.4E-16 124.8 13.0 109 249-359 287-396 (608)
49 2aml_A SIS domain protein; 469 99.2 3.2E-11 1.1E-15 115.9 11.5 132 226-359 20-154 (373)
50 1jeo_A MJ1247, hypothetical pr 99.2 1.4E-10 4.7E-15 99.7 13.8 107 242-356 28-134 (180)
51 3tbf_A Glucosamine--fructose-6 99.2 2.3E-11 7.7E-16 116.9 9.4 136 223-360 14-159 (372)
52 1j5x_A Glucosamine-6-phosphate 99.2 4.7E-11 1.6E-15 113.4 10.6 131 223-356 16-153 (342)
53 1x92_A APC5045, phosphoheptose 99.2 1.9E-10 6.5E-15 100.5 12.4 115 243-358 34-171 (199)
54 1vim_A Hypothetical protein AF 99.2 2.9E-10 9.8E-15 99.7 13.5 112 241-359 34-145 (200)
55 2poc_A D-fructose-6- PH, isome 99.2 1E-10 3.4E-15 112.2 11.2 134 224-359 10-153 (367)
56 1moq_A Glucosamine 6-phosphate 99.2 8.6E-11 2.9E-15 112.7 9.8 135 223-359 12-156 (368)
57 2yva_A DNAA initiator-associat 99.1 6.5E-10 2.2E-14 96.8 14.3 115 242-357 29-166 (196)
58 2zj3_A Glucosamine--fructose-6 99.1 1.7E-10 5.7E-15 111.0 10.8 135 223-359 19-163 (375)
59 3odp_A Putative tagatose-6-pho 99.1 3E-10 1E-14 109.6 11.5 134 223-357 21-169 (393)
60 3c3j_A Putative tagatose-6-pho 99.1 2.8E-10 9.6E-15 109.8 9.6 106 250-356 48-163 (384)
61 2xbl_A Phosphoheptose isomeras 99.1 6E-10 2.1E-14 97.1 10.6 114 244-358 38-171 (198)
62 3jx9_A Putative phosphoheptose 99.0 8.8E-09 3E-13 87.3 14.7 88 74-178 38-127 (170)
63 3trj_A Phosphoheptose isomeras 99.0 2.7E-09 9.1E-14 93.6 11.9 114 244-358 36-172 (201)
64 3i0z_A Putative tagatose-6-pho 99.0 1.1E-09 3.9E-14 105.5 9.8 136 223-359 18-173 (389)
65 2e5f_A Hypothetical protein PH 98.9 8.8E-10 3E-14 103.9 7.2 122 225-356 5-128 (325)
66 1tk9_A Phosphoheptose isomeras 98.9 3.1E-09 1.1E-13 91.7 9.7 113 244-358 32-165 (188)
67 3cvj_A Putative phosphoheptose 98.9 1.4E-09 4.8E-14 98.1 7.3 113 244-357 32-173 (243)
68 1wiw_A Glucose-6-phosphate iso 98.8 4E-09 1.4E-13 97.2 6.8 185 126-347 58-255 (290)
69 1nri_A Hypothetical protein HI 98.8 2E-08 6.9E-13 93.7 11.7 116 242-359 59-196 (306)
70 2q8n_A Glucose-6-phosphate iso 98.7 3.4E-08 1.2E-12 96.5 10.9 181 75-280 79-295 (460)
71 1zzg_A Glucose-6-phosphate iso 98.6 1.5E-07 5.2E-12 90.8 10.7 181 75-281 67-270 (415)
72 1tzb_A Glucose-6-phosphate iso 98.4 7.7E-07 2.6E-11 82.8 10.2 90 253-353 36-126 (302)
73 2wu8_A Glucose-6-phosphate iso 98.2 6.8E-06 2.3E-10 81.6 11.4 184 75-282 144-355 (549)
74 2cxn_A Glucose-6-phosphate iso 98.1 1.3E-05 4.4E-10 79.8 12.0 185 75-283 150-363 (557)
75 2o2c_A GPI, glucose-6-phosphat 98.1 7.2E-06 2.5E-10 82.2 9.1 184 75-282 198-415 (613)
76 1t10_A GPI, glucose-6-phosphat 98.0 1.4E-05 4.8E-10 80.0 9.1 185 75-283 197-415 (605)
77 1b0z_A Protein (phosphoglucose 98.0 1E-05 3.5E-10 78.8 6.9 183 75-281 73-288 (445)
78 3jx9_A Putative phosphoheptose 97.6 0.00073 2.5E-08 57.0 11.6 98 244-351 28-127 (170)
79 2q8n_A Glucose-6-phosphate iso 97.4 0.00015 5.2E-09 70.8 6.2 114 242-356 66-205 (460)
80 1zzg_A Glucose-6-phosphate iso 97.1 0.00029 1E-08 67.9 4.4 112 242-356 54-182 (415)
81 3ff1_A Glucose-6-phosphate iso 96.2 0.0019 6.5E-08 62.6 2.6 48 129-176 132-189 (446)
82 2o3f_A Putative HTH-type trans 96.1 0.00088 3E-08 52.4 -0.4 20 18-37 54-73 (111)
83 3iwf_A Transcription regulator 96.0 0.00072 2.5E-08 52.5 -1.0 20 18-37 50-69 (107)
84 2wu8_A Glucose-6-phosphate iso 95.4 0.027 9.1E-07 55.9 7.1 102 254-357 143-262 (549)
85 1b0z_A Protein (phosphoglucose 95.1 0.024 8.2E-07 55.0 5.7 113 243-356 60-197 (445)
86 2cxn_A Glucose-6-phosphate iso 94.9 0.097 3.3E-06 52.0 9.4 102 254-357 149-269 (557)
87 3ljk_A Glucose-6-phosphate iso 94.6 0.089 3E-06 52.0 8.4 183 76-282 142-353 (543)
88 4em6_D Glucose-6-phosphate iso 94.6 0.12 4E-06 51.3 9.1 183 76-282 152-361 (553)
89 2o2c_A GPI, glucose-6-phosphat 92.5 0.14 4.7E-06 51.4 5.6 102 254-357 197-322 (613)
90 3hjb_A Glucose-6-phosphate iso 92.3 0.49 1.7E-05 47.0 9.2 83 76-167 174-272 (574)
91 1t10_A GPI, glucose-6-phosphat 91.1 0.37 1.3E-05 48.2 7.0 102 254-357 196-321 (605)
92 3ujh_A Glucose-6-phosphate iso 90.1 0.36 1.2E-05 48.0 5.7 86 76-166 153-257 (567)
93 3bch_A 40S ribosomal protein S 89.7 10 0.00035 33.5 14.2 112 44-182 83-197 (253)
94 3qki_A Glucose-6-phosphate iso 89.7 1.1 3.8E-05 44.7 8.9 39 129-167 240-289 (597)
95 2zkq_b 40S ribosomal protein S 89.2 7.4 0.00025 35.2 13.2 112 44-182 50-164 (295)
96 1vi6_A 30S ribosomal protein S 88.7 11 0.00037 32.4 13.4 111 44-182 48-161 (208)
97 2xzm_B RPS0E; ribosome, transl 82.6 5.3 0.00018 35.1 8.5 112 44-182 45-160 (241)
98 3u5c_A 40S ribosomal protein S 82.2 24 0.00084 31.0 12.6 113 44-183 49-164 (252)
99 3iz6_A 40S ribosomal protein S 80.4 33 0.0011 31.0 13.1 113 44-183 54-169 (305)
100 3ff1_A Glucose-6-phosphate iso 79.8 3.7 0.00013 39.6 7.1 115 242-357 63-201 (446)
101 3j20_B 30S ribosomal protein S 79.3 28 0.00097 29.5 12.3 111 44-182 44-157 (202)
102 1pjq_A CYSG, siroheme synthase 73.4 51 0.0017 31.6 13.4 29 132-162 74-102 (457)
103 4ffl_A PYLC; amino acid, biosy 69.8 8.1 0.00028 35.6 6.6 39 145-183 12-50 (363)
104 2iv2_X Formate dehydrogenase H 62.5 33 0.0011 34.9 9.9 55 304-359 167-223 (715)
105 2nap_A Protein (periplasmic ni 60.5 24 0.00083 35.9 8.5 140 128-280 164-330 (723)
106 2iv2_X Formate dehydrogenase H 60.0 12 0.0004 38.3 6.0 55 129-184 165-221 (715)
107 2nap_A Protein (periplasmic ni 58.8 47 0.0016 33.7 10.4 55 304-359 167-225 (723)
108 3bbn_B Ribosomal protein S2; s 58.2 28 0.00095 30.3 7.2 47 130-182 157-203 (231)
109 2e7z_A Acetylene hydratase AHY 57.9 8.1 0.00028 39.5 4.4 124 128-264 158-294 (727)
110 2vpz_A Thiosulfate reductase; 57.6 11 0.00037 38.9 5.3 138 130-280 199-354 (765)
111 1eu1_A Dimethyl sulfoxide redu 57.4 14 0.00047 38.2 6.0 122 146-280 203-344 (780)
112 2ivf_A Ethylbenzene dehydrogen 54.8 1.4E+02 0.0049 31.4 13.6 55 130-185 246-302 (976)
113 3iz6_A 40S ribosomal protein S 50.8 1.4E+02 0.0048 26.9 11.5 90 251-353 72-166 (305)
114 1vi6_A 30S ribosomal protein S 50.2 1E+02 0.0035 26.2 9.4 87 253-352 67-158 (208)
115 3r8n_B 30S ribosomal protein S 50.2 20 0.0007 30.8 5.0 47 129-181 148-194 (218)
116 1h0h_A Formate dehydrogenase ( 48.9 1.7E+02 0.006 30.8 13.0 56 129-185 183-240 (977)
117 3dfz_A SIRC, precorrin-2 dehyd 48.8 8.4 0.00029 33.4 2.3 46 109-154 114-161 (223)
118 1w4r_A Thymidine kinase; type 47.1 21 0.00072 30.2 4.5 38 133-170 24-61 (195)
119 3u31_A SIR2A, transcriptional 46.3 58 0.002 29.2 7.6 53 128-181 214-267 (290)
120 2l82_A Designed protein OR32; 46.0 94 0.0032 23.4 7.8 95 245-342 16-115 (162)
121 3i9v_3 NADH-quinone oxidoreduc 45.7 52 0.0018 33.9 8.2 31 328-359 443-473 (783)
122 1ti6_A Pyrogallol hydroxytrans 45.3 33 0.0011 35.8 6.7 31 153-184 238-269 (875)
123 2qip_A Protein of unknown func 44.8 20 0.00067 29.2 3.9 51 129-182 107-160 (165)
124 3j20_B 30S ribosomal protein S 44.6 1.4E+02 0.0049 25.1 10.1 78 253-341 63-145 (202)
125 1tif_A IF3-N, translation init 43.4 24 0.00082 25.1 3.6 44 134-177 16-62 (78)
126 2hna_A Protein MIOC, flavodoxi 43.2 82 0.0028 24.4 7.4 32 132-163 4-36 (147)
127 3u5c_A 40S ribosomal protein S 42.0 1.7E+02 0.0059 25.6 9.7 88 253-353 69-161 (252)
128 2vqe_B 30S ribosomal protein S 41.7 66 0.0023 28.3 7.0 48 129-182 157-204 (256)
129 3bch_A 40S ribosomal protein S 41.5 1.8E+02 0.0062 25.4 10.1 88 252-352 102-194 (253)
130 1tmo_A TMAO reductase, trimeth 41.2 24 0.00083 36.6 4.8 122 146-280 236-381 (829)
131 3ml1_A NAPA, periplasmic nitra 41.2 1.3E+02 0.0045 31.0 10.4 30 329-359 208-237 (802)
132 3ljk_A Glucose-6-phosphate iso 40.7 31 0.0011 33.9 5.2 27 131-157 40-67 (543)
133 1qv9_A F420-dependent methylen 40.6 38 0.0013 29.6 5.0 41 130-170 64-104 (283)
134 4em6_D Glucose-6-phosphate iso 40.1 35 0.0012 33.7 5.5 27 131-157 50-77 (553)
135 2r7k_A 5-formaminoimidazole-4- 40.0 50 0.0017 30.6 6.4 49 131-182 17-68 (361)
136 2jvf_A De novo protein M7; tet 39.9 17 0.00058 25.2 2.2 21 11-31 60-80 (96)
137 3cf4_G Acetyl-COA decarboxylas 37.5 53 0.0018 26.7 5.5 44 244-287 24-68 (170)
138 3k35_A NAD-dependent deacetyla 37.4 42 0.0014 30.6 5.2 51 129-180 205-255 (318)
139 3qki_A Glucose-6-phosphate iso 36.7 64 0.0022 32.1 6.8 27 131-157 62-89 (597)
140 1s5p_A NAD-dependent deacetyla 36.0 34 0.0012 29.6 4.3 52 129-181 166-217 (235)
141 3rht_A (gatase1)-like protein; 35.4 83 0.0028 27.7 6.7 58 109-166 29-88 (259)
142 2xzm_B RPS0E; ribosome, transl 33.5 2E+02 0.0067 25.0 8.7 79 251-340 63-147 (241)
143 3riy_A NAD-dependent deacetyla 33.5 40 0.0014 30.0 4.4 53 128-181 210-262 (273)
144 2e7z_A Acetylene hydratase AHY 33.1 47 0.0016 33.7 5.4 41 318-359 178-218 (727)
145 2qip_A Protein of unknown func 33.1 58 0.002 26.2 5.0 49 304-356 110-161 (165)
146 1xjc_A MOBB protein homolog; s 32.8 36 0.0012 27.9 3.7 36 133-168 8-43 (169)
147 1xkp_B Chaperone protein SYCN; 32.5 22 0.00076 27.6 2.1 19 16-34 4-22 (124)
148 2pr7_A Haloacid dehalogenase/e 32.2 44 0.0015 24.9 4.0 26 144-169 21-46 (137)
149 1xx6_A Thymidine kinase; NESG, 32.0 32 0.0011 28.7 3.3 33 136-168 15-47 (191)
150 3hr4_A Nitric oxide synthase, 31.5 2.4E+02 0.0082 23.9 8.9 80 261-343 46-134 (219)
151 2zkq_b 40S ribosomal protein S 31.1 2.9E+02 0.0099 24.7 11.4 90 250-352 67-161 (295)
152 3pdw_A Uncharacterized hydrola 31.1 31 0.001 29.7 3.2 33 143-175 24-56 (266)
153 3qgm_A P-nitrophenyl phosphata 30.1 32 0.0011 29.6 3.1 32 143-174 26-57 (268)
154 1dtc_A Acetyl-delta-toxin; NMR 28.5 12 0.0004 20.3 -0.1 11 15-25 4-14 (26)
155 3eag_A UDP-N-acetylmuramate:L- 28.3 1.2E+02 0.004 27.3 6.7 14 75-88 5-18 (326)
156 2pbz_A Hypothetical protein; N 27.9 57 0.002 29.7 4.5 45 135-182 5-52 (320)
157 3orq_A N5-carboxyaminoimidazol 27.7 99 0.0034 28.4 6.3 37 146-182 24-60 (377)
158 3epr_A Hydrolase, haloacid deh 26.7 41 0.0014 28.9 3.2 31 144-174 24-54 (264)
159 3pki_A NAD-dependent deacetyla 26.6 57 0.0019 30.2 4.2 51 129-180 205-255 (355)
160 3hr4_A Nitric oxide synthase, 26.2 89 0.003 26.7 5.1 31 131-161 42-72 (219)
161 2vpz_A Thiosulfate reductase; 25.9 1.5E+02 0.005 30.3 7.7 41 318-359 217-257 (765)
162 3q2o_A Phosphoribosylaminoimid 25.4 1.1E+02 0.0038 28.1 6.2 37 145-181 25-61 (389)
163 3hly_A Flavodoxin-like domain; 25.4 1.1E+02 0.0037 24.3 5.4 29 133-161 4-33 (161)
164 1kjq_A GART 2, phosphoribosylg 25.0 1.8E+02 0.0063 26.4 7.6 42 139-182 18-59 (391)
165 4e4t_A Phosphoribosylaminoimid 24.8 1.2E+02 0.0041 28.4 6.3 37 145-181 46-82 (419)
166 1kqf_A FDH-N alpha, formate de 24.8 1.4E+02 0.0049 31.6 7.5 97 150-263 244-411 (1015)
167 2obb_A Hypothetical protein; s 24.5 39 0.0013 26.8 2.4 26 143-168 26-51 (142)
168 1f4p_A Flavodoxin; electron tr 24.2 97 0.0033 23.8 4.8 30 132-161 3-33 (147)
169 1xff_A D-fructose-6-, glucosam 24.2 6.8 0.00023 34.1 -2.5 46 47-92 147-193 (240)
170 3f9r_A Phosphomannomutase; try 23.9 62 0.0021 27.8 3.8 32 142-173 22-53 (246)
171 3klb_A Putative flavoprotein; 23.8 49 0.0017 26.5 2.9 33 130-164 5-37 (162)
172 1ma3_A SIR2-AF2, transcription 23.1 80 0.0027 27.5 4.4 52 129-181 182-233 (253)
173 1xpj_A Hypothetical protein; s 22.9 86 0.003 23.7 4.1 27 142-168 25-51 (126)
174 4dim_A Phosphoribosylglycinami 22.9 61 0.0021 29.9 3.8 37 146-182 19-56 (403)
175 3ib6_A Uncharacterized protein 22.4 65 0.0022 26.1 3.5 27 143-169 36-62 (189)
176 1h0h_A Formate dehydrogenase ( 22.4 1.8E+02 0.0061 30.7 7.7 38 321-359 204-241 (977)
177 3l8h_A Putative haloacid dehal 22.2 59 0.002 25.8 3.1 25 143-167 29-53 (179)
178 3ml1_A NAPA, periplasmic nitra 21.5 2.4E+02 0.0083 29.0 8.3 56 129-185 177-236 (802)
179 2p9j_A Hypothetical protein AQ 21.2 81 0.0028 24.5 3.8 27 143-169 38-64 (162)
180 4hv4_A UDP-N-acetylmuramate--L 21.0 1.4E+02 0.0047 28.7 6.0 15 74-88 22-36 (494)
181 1m2k_A Silent information regu 20.9 1.2E+02 0.004 26.3 5.0 50 130-180 177-226 (249)
182 3ax6_A Phosphoribosylaminoimid 20.9 1.9E+02 0.0067 26.2 6.9 37 146-182 13-49 (380)
183 2l82_A Designed protein OR32; 20.8 1.5E+02 0.0052 22.3 4.8 43 132-175 79-121 (162)
184 2orw_A Thymidine kinase; TMTK, 20.7 95 0.0032 25.3 4.2 36 134-169 8-43 (184)
185 3bbn_B Ribosomal protein S2; s 20.2 4.1E+02 0.014 22.7 9.8 20 321-340 171-190 (231)
186 1yc5_A NAD-dependent deacetyla 20.1 98 0.0034 26.8 4.3 50 130-180 180-229 (246)
No 1
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=100.00 E-value=9.1e-52 Score=398.99 Aligned_cols=308 Identities=32% Similarity=0.477 Sum_probs=266.7
Q ss_pred HHHHHHHHHHHHHHHhhhhccCcc-----c------eeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPG-----E------CVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELP 112 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~-----~------~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~ 112 (361)
.+.+++.+.+++|..........+ . -.+...++|+++|+|+|+++|. .++++++++.|++
T Consensus 13 ~m~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~a~~I~i~G~GtS~~aa~---------~~~~~~~~~~g~~ 83 (372)
T 3tbf_A 13 YMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGM---------TAKYWIEKYAKVP 83 (372)
T ss_dssp HHHHHHHTHHHHHHHHHHTTEETTEECGGGSCSTHHHHHHSCCEEEEEECHHHHHHHH---------HHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhhhhhhHHHHHHHhcCCEEEEEEechHHHHHH---------HHHHHHHHHhCCc
Confidence 455666666666666554211100 0 0134567999999999998875 4588999989999
Q ss_pred eEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcC-CeEEEEEcCCCCccccccCeeEEcccCCCccccc
Q psy1915 113 VMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYCKARG-ALIVGVTNTVGSSISRESHCGIHINAGPEIGVAS 191 (361)
Q Consensus 113 ~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g-~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~ 191 (361)
+.+..++++.+....++++|++|+||+||+|++++++++.||++| +++|+|||+++|||++.||++|.+++|+|.++++
T Consensus 84 ~~~~~~se~~~~~~~~~~~dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~~~~g~E~~~a~ 163 (372)
T 3tbf_A 84 CSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVAS 163 (372)
T ss_dssp EEEEEHHHHTTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEECCCCCCCBSSC
T ss_pred EEEechhHhhhcccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeeeecCCccccchh
Confidence 999999998766667899999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHhhhhcch-HHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHH
Q psy1915 192 TKAYTSQFISLVMFALVMCEDRISL-QTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCM 270 (361)
Q Consensus 192 t~s~t~~~~~l~~l~~~~~~~~~~~-~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~ 270 (361)
|++|++|++++++|++.+++.++.. .+++++++++|..+|+.++++++.+++++++++.+.+.++++|+|+|++|++|+
T Consensus 164 Tks~t~ql~~l~lL~~~l~~~~g~~~~~~~~~~~~~l~~lp~~~~~~l~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~ 243 (372)
T 3tbf_A 164 TKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAI 243 (372)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHTHHHHHHHHHTTHHHHHHHHGGGTTCCEEEEEECTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHhccCCEEEEecCcCHHHHH
Confidence 9999999999999999988876643 456788999999999999999987778999999999999999999999999999
Q ss_pred HHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCC-chhhhccc
Q psy1915 271 EGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGD-TETQALAT 349 (361)
Q Consensus 271 e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~-~~~~~~~d 349 (361)
|++|||+|++++|+++|+++||+|||+++++++++||++.+.|+..+++++.+++++++|+++++|+++++ ......+|
T Consensus 244 E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~d~~~~k~~~~~~e~~~rg~~vi~i~~~~~~~~~~~~~~ 323 (372)
T 3tbf_A 244 EGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNS 323 (372)
T ss_dssp HHHHHHHHHHCCEEEEEEGGGTTTTTTTTCCTTCEEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEEGGGGGGCCCTTC
T ss_pred HHHHHHHHHhCcCcceeeHHHhcCccHhhcCCCCeEEEEecCCchHHHHHHHHHHHHHcCCeEEEEECCCcccccccccc
Confidence 99999999999999999999999999999999999999999888878899999999999999999998764 22234568
Q ss_pred ceEEcCCCCCC
Q psy1915 350 KTLEVPHTVDC 360 (361)
Q Consensus 350 ~~i~~p~~~~~ 360 (361)
.++.+|.+++.
T Consensus 324 ~~i~~p~~~~~ 334 (372)
T 3tbf_A 324 IVLELDAGHDF 334 (372)
T ss_dssp EEEEECCCSTT
T ss_pred eEEECCCCchh
Confidence 88999987764
No 2
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=100.00 E-value=9.7e-49 Score=378.65 Aligned_cols=280 Identities=73% Similarity=1.160 Sum_probs=253.9
Q ss_pred ccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHH
Q psy1915 73 RRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRY 152 (361)
Q Consensus 73 ~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ 152 (361)
..++++++|+|+|++++. .++++++++.++++.+..++++.+....++++|++|+||+||+|++++++++.
T Consensus 59 ~~~~I~i~G~G~S~~a~~---------~a~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ 129 (375)
T 2zj3_A 59 RCRRLILIACGTSYHAGV---------ATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMGLRY 129 (375)
T ss_dssp HCSEEEEEECHHHHHHHH---------HHHHHHHHHHCSCEEEEEHHHHHHTTCCCCTTEEEEEEESSSCCHHHHHHHHH
T ss_pred CCCEEEEEEecHHHHHHH---------HHHHHHHHHhCCCeEEEeechHhhhccCCCCCCEEEEEeCCCCCHHHHHHHHH
Confidence 457999999999977653 45788899889999988888876656678999999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHH
Q psy1915 153 CKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHE 232 (361)
Q Consensus 153 ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~ 232 (361)
||++|+++|+||++++|||++.||++|.++.++|.++++|++|++|++++++|+..++..++...++++++++.|..+|+
T Consensus 130 Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E~~~a~t~s~ta~l~~l~~L~~~l~~~~~~~~~~~~~~~~~l~~l~~ 209 (375)
T 2zj3_A 130 CKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPD 209 (375)
T ss_dssp HHHTTCEEEEEESCTTCHHHHHSSEEEECCCCCCCCSSCSHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCCCChHHHhCCEeeeecCCcccchhhhhhHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998889999999999999999988887665445567789999999999
Q ss_pred HHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcC
Q psy1915 233 QIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTR 312 (361)
Q Consensus 233 ~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~ 312 (361)
.++++++..++++++++.+.+.++++|+|+|++|++|+|++|||+|++++|+++|+++||+|||+++++++++||++.++
T Consensus 210 ~~~~~l~~~~~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~aLKl~E~s~i~ae~~~~~E~~HGp~ali~~~~~vi~l~~~ 289 (375)
T 2zj3_A 210 LIKEVLSMDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMR 289 (375)
T ss_dssp HHHHHHTTHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEEECS
T ss_pred HHHHHHhhhHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHHhhhccccccHHHhccCcHHHcCCCCeEEEEECC
Confidence 99999986678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCCCC
Q psy1915 313 DPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDCL 361 (361)
Q Consensus 313 g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~~~ 361 (361)
|+..+++++.+++++++|+++++|+++++..+...+|.++.+|..++.+
T Consensus 290 ~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~~~~~~~i~~p~~~~~l 338 (375)
T 2zj3_A 290 DHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVDCL 338 (375)
T ss_dssp STTHHHHHHHHHHHHHTTCCCEEEEETTCHHHHHHCSSEEEECCCCTTT
T ss_pred ChhHHHHHHHHHHHHHcCCeEEEEECCCchhhhhccCcEEEcCCCchhH
Confidence 9888899999999999999999999887666655678899999877653
No 3
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=100.00 E-value=2.8e-48 Score=374.50 Aligned_cols=279 Identities=61% Similarity=0.995 Sum_probs=239.1
Q ss_pred ccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHH
Q psy1915 73 RRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRY 152 (361)
Q Consensus 73 ~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ 152 (361)
..++++++|+|+|++++. .++++++++.++++.+..++++.+....++++|++|+||+||+|++++++++.
T Consensus 49 ~~~~I~i~G~G~S~~~~~---------~a~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ 119 (367)
T 2poc_A 49 RCRRIIMIACGTSYHSCL---------ATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQY 119 (367)
T ss_dssp TSSEEEEEECHHHHHHHH---------HHHHHHHHHHCSCEEEEEHHHHHHTTCCCCTTEEEEEEESSSCCHHHHHHHHH
T ss_pred CCCEEEEEEecHHHHHHH---------HHHHHHHHHhCCCeEEEehhhhHhhccCCCCCCEEEEEeCCCCCHHHHHHHHH
Confidence 457999999999977653 35788898899999988888886666678999999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHH
Q psy1915 153 CKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHE 232 (361)
Q Consensus 153 ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~ 232 (361)
||++|+++|+||++++|||++.||++|.++.|+|.++++|++|++|++++++|+..++..++...++++++++.|..+|+
T Consensus 120 Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E~~~a~t~s~t~~l~~l~~L~~~l~~~~~~~~~~~~~~~~~l~~lp~ 199 (367)
T 2poc_A 120 CLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPE 199 (367)
T ss_dssp HHHTTCEEEEEESSTTSHHHHHSSEEEECCCCCCCSSSCSHHHHHHHHHHHHHHHHHTTTBSTTHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEECCCCChHHHhCCEEEEcCCCCcccccccHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998889999999999999999998887665445567889999999999
Q ss_pred HHHHHHcccHHHHHHHHH-HhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEc
Q psy1915 233 QIREVLQMDSEVQQLAKE-MYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILT 311 (361)
Q Consensus 233 ~~~~~l~~~~~~~~~a~~-l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~ 311 (361)
.++++++..++++++++. +.+.++++|+|+|++|++|+|++|||+|++++|+++|+++||+|||+.+++++++||++.+
T Consensus 200 ~~~~~l~~~~~~~~~a~~~~~~~~~~~~lG~G~~~~~A~e~alKl~E~s~i~ae~~~a~E~~HGp~~lv~~~~~vi~i~~ 279 (367)
T 2poc_A 200 QIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFAT 279 (367)
T ss_dssp HHHHHGGGHHHHHHHHHSGGGGCSEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEETTCC-----------CCEEEECC
T ss_pred HHHHHHhchHHHHHHHHHHhccCCcEEEEcCCCChHHHHHHHHHHHHHhccccccccHHHhccchHhhccCCCcEEEEEc
Confidence 999999876789999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhccc-ceEEcCCCCCC
Q psy1915 312 RDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALAT-KTLEVPHTVDC 360 (361)
Q Consensus 312 ~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d-~~i~~p~~~~~ 360 (361)
+|+..+++++.+++++++|+++++|+++++..+...+| .++.+|..++.
T Consensus 280 ~~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~~~~~~~~i~~p~~~~~ 329 (367)
T 2poc_A 280 RDSLFPKVMSAIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVDC 329 (367)
T ss_dssp GGGCCHHHHHHHHHHHHTTCCCEEEEETTCCSCC---CCEEEEECCCCGG
T ss_pred CChhHHHHHHHHHHHHHcCCeEEEEECCCchhhhccCCccEEEeCCCchh
Confidence 88887899999999999999999999876655544455 78999987654
No 4
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=100.00 E-value=4.1e-48 Score=370.98 Aligned_cols=270 Identities=17% Similarity=0.218 Sum_probs=238.7
Q ss_pred eccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCC-CCCEEEEEcCCCCcHHHHHHH
Q psy1915 72 TRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVF-RDDVCFFISQSGETADSLMAL 150 (361)
Q Consensus 72 ~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~-~~dlvI~iS~SG~t~e~~~a~ 150 (361)
...++|+++|+|+|+++|. .++++++++.|+++.+..++++.+...... ++|++|+||+||+|+++++++
T Consensus 32 ~~~~~I~i~G~G~S~~~a~---------~~~~~l~~~~g~~~~~~~~se~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~ 102 (352)
T 3g68_A 32 TNLKKIIITGSGTSYHSGV---------QVQPYLQNLLDIDVVKMYPFMITEDTFKFDNENTLVVGVSQGGSSYSTYNAM 102 (352)
T ss_dssp SCCSEEEEECSHHHHHHHH---------HHHHHHHHHCSSEEEEECGGGCCGGGGSSCCTTEEEEEEESSSCCHHHHHHH
T ss_pred cCCCEEEEEEeehHHHHHH---------HHHHHHHHHhCCcEEEEcchhhhhcccCCCCCCcEEEEEeCCCCCHHHHHHH
Confidence 3457999999999998875 457899998999999999999866555665 999999999999999999999
Q ss_pred HHHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcch-HHHHHHHHHHHHH
Q psy1915 151 RYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISL-QTRRNEIIKGLKV 229 (361)
Q Consensus 151 ~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~-~~~~~~~~~~l~~ 229 (361)
+.||++|+++|+|||+++|||++.||++|.+++++|.++++|++|++|++++++|++.+++.++.. .++++++++.|..
T Consensus 103 ~~ak~~ga~~iaIT~~~~S~La~~aD~~l~~~~g~E~~va~tksf~~ql~~l~~La~~l~~~~g~~~~~~~~~~~~~l~~ 182 (352)
T 3g68_A 103 KLAEDKGCKIASMAGCKNALIDEISDYILTVNCGEEKSGAKTKGYYCTKLNLMLLGLQIAREKGIISSEKYNEEINKILD 182 (352)
T ss_dssp HHHHHTTCEEEEEESSTTCGGGGGCSEECCCCCCCCCCSSCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEeCCCCChHHHhCCEEEEeCCCCCccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888999999999999999999988876643 4567889999999
Q ss_pred HHHHHHHHHc-ccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEE
Q psy1915 230 IHEQIREVLQ-MDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIM 308 (361)
Q Consensus 230 l~~~~~~~l~-~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~ 308 (361)
+|+.+.++++ ..++++++++.+.+.++++|+|+|++|++|+|++||++|++++|+++|+++||+|||+++++++++||+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~ 262 (352)
T 3g68_A 183 AINRFEAVYKLSKQWIERNKEKLVNSKEIRIIGHSDIYGDTLEAALKLLETMRIPVTGYEFEEFIHGIYNAINSDSTIFI 262 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHTCCEEEEEECGGGHHHHHHHHHHHHHHHCSCEEEEEHHHHHTTGGGGCCTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHHHHHHHHhcccccccchhhccccchheeCCCceEEE
Confidence 9999998887 345789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCC
Q psy1915 309 ILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHT 357 (361)
Q Consensus 309 i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~ 357 (361)
+.+.+.++ ..+..++++++|+++++|+++++. .+..+.+|..
T Consensus 263 ~~~~~~~~--~~~~~~~~~~~g~~v~~i~~~~~~-----~~~~~~~p~~ 304 (352)
T 3g68_A 263 LDTGKEPR--VTKMIDVLSGWTENVFAIGRDVTE-----NDKNLKIDIT 304 (352)
T ss_dssp EECSCCTT--HHHHHHHHHTTCSCEEEEESSCCC-----STTCEECCCC
T ss_pred EECCchHH--HHHHHHHHHHcCCeEEEEecCCCC-----CceeEEeCCC
Confidence 99866543 345566788899999999887642 3567788864
No 5
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=100.00 E-value=2.4e-48 Score=373.91 Aligned_cols=269 Identities=19% Similarity=0.217 Sum_probs=232.9
Q ss_pred ccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHH
Q psy1915 73 RRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRY 152 (361)
Q Consensus 73 ~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ 152 (361)
+.++|+++|+|+|+++|. .++++++++.|+++.+..++++.+.....+++|++|+||+||+|+|++++++.
T Consensus 49 ~a~~I~i~G~GtS~~aa~---------~~~~~~~~~~g~~~~~~~~se~~~~~~~~~~~dlvI~iS~SGeT~e~l~a~~~ 119 (366)
T 3knz_A 49 GVTRIILTGSGTSYHGAL---------TARTFMQRWCALPVDVCWPFMLDDETLARSGKALVVGISQGGGSLSTLAAMER 119 (366)
T ss_dssp TCCEEEEECCHHHHHHHH---------HHHHHHHHHHTSCEEEECGGGCCHHHHHHSCSEEEEEEESSSCCHHHHHHHHH
T ss_pred CCCEEEEEEechHHHHHH---------HHHHHHHHHHCCCeEEEcchHHHhhccCCCCCCEEEEEcCCCCCHHHHHHHHH
Confidence 346899999999988775 45788998889999999999986544456899999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcch-HHHHHHHHHHHHHHH
Q psy1915 153 CKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISL-QTRRNEIIKGLKVIH 231 (361)
Q Consensus 153 ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~-~~~~~~~~~~l~~l~ 231 (361)
||++|+++|+|||+++|||++.||++|.+++++|.++++|++|++|++++++|++.+++.++.. .++++++++.|..+|
T Consensus 120 ak~~Ga~~IaIT~~~~S~La~~aD~~l~~~~g~E~~~a~tks~tsql~~l~lLa~~l~~~~g~~~~~~~~~~~~~l~~~~ 199 (366)
T 3knz_A 120 ARNVGHITASMAGVAPATIDRAADYILTVPCGEETAGAKTKGYHCTVLNLMLLALAVAGQQQRLDGEQRRSLLLRMEKTF 199 (366)
T ss_dssp HHHTTCEEEEEESSSSCGGGGGCSEECCCCCCC------CTHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECCCCChhhhhcCEEEecCCCccccccccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888999999999999999999888876643 456788999999999
Q ss_pred HHHHHHHc-ccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEE
Q psy1915 232 EQIREVLQ-MDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMIL 310 (361)
Q Consensus 232 ~~~~~~l~-~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~ 310 (361)
+.+.++++ ..++++++++.+.+.++++|+|+|++|++|+|++||++|++++|+++|+++||+|||+++++++++||++.
T Consensus 200 ~~~~~~l~~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~EgALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~ 279 (366)
T 3knz_A 200 NHLPALVTASQAWAQTNALALRDSADIRLTGPATLFGTVQEGALKMLETLRCPVSGYEFEEFIHGIYNAFNAQSALIMLD 279 (366)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHTCSEEEEEECGGGHHHHHHHHHHHHHHHCSCEEEEEHHHHHHTHHHHCCTTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHHhcccceeechhhcCcCchhhhCCCceEEEEe
Confidence 99999887 34578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCC
Q psy1915 311 TRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHT 357 (361)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~ 357 (361)
+.++. +..+.+++++++|+++++|+++++. .+..+.+|..
T Consensus 280 ~~~~~--~~~~~~~~l~~~g~~vi~i~~~~~~-----~~~~~~~p~~ 319 (366)
T 3knz_A 280 PQPDA--RQDRLAQILGEWTPSIYRIGPQVEN-----NGLNLNFPFV 319 (366)
T ss_dssp SSCCH--HHHHHHHHHHHHCSCEEEEESSSCC-----SSSSEECCCC
T ss_pred cCchH--HHHHHHHHHHHcCCeEEEEecCCCc-----cceeEEeCCC
Confidence 86653 4566777888999999999876532 4567778864
No 6
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=100.00 E-value=1.1e-47 Score=370.71 Aligned_cols=280 Identities=35% Similarity=0.545 Sum_probs=250.0
Q ss_pred eccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHH
Q psy1915 72 TRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALR 151 (361)
Q Consensus 72 ~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~ 151 (361)
...++++++|+|+|+++|. .++++++++.++++.+..++++.+....++++|++|+||+||+|++++++++
T Consensus 50 ~~~~~I~i~G~G~S~~~a~---------~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~ 120 (368)
T 1moq_A 50 SKVEHIQILACGTSYNSGM---------VSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLR 120 (368)
T ss_dssp HHCCEEEEEECHHHHHHHH---------HHHHHHHHHSCCCEEEEEHHHHHTSCCCCCTTEEEEEEESSSCCHHHHHHHH
T ss_pred hCCCEEEEEEchHHHHHHH---------HHHHHHHHHhCCceEEEehhhHhhhcCCCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 3457999999999999885 2467888888999988888887665667899999999999999999999999
Q ss_pred HHHHcC-CeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHH
Q psy1915 152 YCKARG-ALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVI 230 (361)
Q Consensus 152 ~ak~~g-~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l 230 (361)
.||++| +++|+||++++|||++.||++|.++.++|.++++|++|++|++++++|+..++..++...++++++.+.|+.+
T Consensus 121 ~ak~~G~a~viaIT~~~~S~La~~ad~~l~~~~~~e~~~a~t~s~~~~l~~l~~L~~~l~~~~~~~~~~~~~~~~~l~~l 200 (368)
T 1moq_A 121 LSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQAL 200 (368)
T ss_dssp HHTTTTCSEEEEEESSTTCHHHHHSSEEEECCCCCCCSSSCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEEECCCCChHHHhCCEEEEcCCCCeecccchhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 999999 9999999999999999999999999998888889999999999999999888876652245677889999999
Q ss_pred HHHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEE
Q psy1915 231 HEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMIL 310 (361)
Q Consensus 231 ~~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~ 310 (361)
|+.++++++..++++++++.+.+.++++|+|+|++|++|+|++|||+|++++|+++|+++||+|||+.+++++++||++.
T Consensus 201 ~~~~~~~l~~~~~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~aLKl~E~~~i~ae~~~~~E~~HGp~~lv~~~~~vi~~~ 280 (368)
T 1moq_A 201 PSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVA 280 (368)
T ss_dssp HHHHHHHTTCTTHHHHHHHHHTTCSEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEES
T ss_pred HHHHHHHHhhhHHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHHHHHHHHhccccccccHHHhccCcHHHcCCCceEEEEE
Confidence 99999999766789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCCC
Q psy1915 311 TRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDC 360 (361)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~~ 360 (361)
++|+..+++.+.+++++++|+++++|+++++..+...+|..+.+|.+++.
T Consensus 281 ~~~~~~~~~~~~~~e~~~~g~~v~~i~~~~~~~~~~~~~~~i~~p~~~~~ 330 (368)
T 1moq_A 281 PNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEV 330 (368)
T ss_dssp CCHHHHHHHHHHHHHTGGGTCCEEEEEEGGGCCCCBTTEEEEEECCCCGG
T ss_pred cCCchHHHHHHHHHHHHHcCCeEEEEECCCcchhcccCCceEEcCCCchh
Confidence 88887778899999999999999999977544444556788889987654
No 7
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=9.2e-48 Score=367.44 Aligned_cols=250 Identities=24% Similarity=0.307 Sum_probs=223.3
Q ss_pred ccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEeccccc-ccCCCCCCCCEEEEEcCCCCcHHHHHHHH
Q psy1915 73 RRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFL-DRNTPVFRDDVCFFISQSGETADSLMALR 151 (361)
Q Consensus 73 ~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~~~a~~ 151 (361)
..++|+++|+|+|+++|. .++++++++.|+++.+..+.... +..+..+++|++|+||+||+|+|++++++
T Consensus 42 ~~~~I~i~G~G~S~~aa~---------~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~ 112 (344)
T 3fj1_A 42 DPSFVATVARGSSDHVCT---------YLSYAAELLLGLPVASLGPSVASVYDARLRLDRALCLAVSQSGKSPDIVAMTR 112 (344)
T ss_dssp CCSEEEEECCTHHHHHHH---------HHHHHHHHHHCCCEEECCTHHHHTTCCCCCCTTEEEEEEESSSCCHHHHHHHH
T ss_pred CCCEEEEEEechHHHHHH---------HHHHHHHHHhCCcEEEecchHHhhhcccCCCCCcEEEEEcCCCCCHHHHHHHH
Confidence 346899999999998775 45789998889999886554432 34456789999999999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHH
Q psy1915 152 YCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIH 231 (361)
Q Consensus 152 ~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~ 231 (361)
.||++|+++|+|||+++|||++.||++|.+++|+|.++++|++|++|++.+++|+..+++ .+++.+.|+++|
T Consensus 113 ~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E~~va~Tksft~ql~~l~~l~~~~~~--------~~~~~~~l~~lp 184 (344)
T 3fj1_A 113 NAGRDGALCVALTNDAASPLAGVSAHTIDIHAGPELSVAATKTFVTSAVAGLMLLADWAE--------DDGLRAALGNLP 184 (344)
T ss_dssp HHHHTTCEEEEEESCTTSHHHHTSSEEEECCCCCCCSTTCHHHHHHHHHHHHHHHHHHHT--------CHHHHHHHHTHH
T ss_pred HHHHCCCcEEEEECCCCChHHHhcCEeeecCCCCcccccchHHHHHHHHHHHHHHHHHhc--------hHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998888776553 245778899999
Q ss_pred HHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEc
Q psy1915 232 EQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILT 311 (361)
Q Consensus 232 ~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~ 311 (361)
+.++++++. .++++++.+.+.++++|+|+|++|++|+|++|||+|++++|+++|+++||+|||+++++++++||++.+
T Consensus 185 ~~~~~~l~~--~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~ALKlkE~s~i~ae~~~~~E~~HGP~ali~~~~~vi~~~~ 262 (344)
T 3fj1_A 185 ETLAAASRI--DWPEMRVAIGARPSLFTLGRGTSLAVSNEAALKFKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGFAA 262 (344)
T ss_dssp HHHHHHHTC--CCHHHHHHHHHSCCEEEEECGGGHHHHHHHHHHHHHHHCCCEEEEETTTGGGSSSCHHHHTCCEEECCC
T ss_pred HHHHHHHHH--HHHHHHHHHhCCCcEEEEECCCCHHHHHHHHHHHHHHhccCceeecHHhhccchHhhhcCCceEEEEec
Confidence 999999863 257889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHcCCcEEEEecCCC
Q psy1915 312 RDPVYVKCMNALLQVIARDGRPIVICEKGD 341 (361)
Q Consensus 312 ~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~ 341 (361)
+|++++++.+.+++++++|+++++|+++++
T Consensus 263 ~~~~~~~~~~~~~e~~~~g~~v~~i~~~~~ 292 (344)
T 3fj1_A 263 GDAAEAPLAEIADQIAAKGATVFATTGRVT 292 (344)
T ss_dssp SSTTHHHHHHHHHHHHHTTCCEEESSTTCS
T ss_pred CCchHHHHHHHHHHHHHcCCeEEEEeCCCC
Confidence 998888899999999999999999987654
No 8
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=100.00 E-value=4.5e-47 Score=361.00 Aligned_cols=249 Identities=24% Similarity=0.380 Sum_probs=210.8
Q ss_pred ccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEeccccc-ccCCCCCCCCEEEEEcCCCCcHHHHHHHH
Q psy1915 73 RRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFL-DRNTPVFRDDVCFFISQSGETADSLMALR 151 (361)
Q Consensus 73 ~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~~~a~~ 151 (361)
..++|+++|+|+|+++|. .+++++++.+|+++.+..+.+.. +..+...++|++|+||+||+|++++++++
T Consensus 41 ~~~~I~i~G~G~S~~aa~---------~~~~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~dl~i~iS~SG~T~e~~~a~~ 111 (334)
T 3hba_A 41 KPKFVMIVGRGSSDHAGV---------FAKYLFEIEASIPTFAAAPSVASVYGKTLKLAGGLVIVISQSGRSPDILAQAR 111 (334)
T ss_dssp CCSCEEEESSGGGCHHHH---------HHHHHHHHHHCCCEEECCHHHHHTSCCCCCCTTCEEEEEESSSCCHHHHHHHH
T ss_pred CCCEEEEEEechHHHHHH---------HHHHHHHHHhCCcEEEEcchHHHHhcccCCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 346899999999999885 35788888889999887665442 34456789999999999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHH
Q psy1915 152 YCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIH 231 (361)
Q Consensus 152 ~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~ 231 (361)
.||++|+++|+||++++|||++.||++|.+++|+|.++++|++|++|++.+++|+..+++ .+++.+.|+++|
T Consensus 112 ~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~g~E~~va~Tksft~~l~~l~~l~~~~~~--------~~~~~~~l~~lp 183 (334)
T 3hba_A 112 MAKNAGAFCVALVNDETAPIKDIVDVVIPLRAGEEKAVAATKSYLATLSALLQVAAKWTQ--------NESLVEAVNSLP 183 (334)
T ss_dssp HHHHTTCEEEEEESCTTSGGGGTSSEEEECCCCCCCSSSCSHHHHHHHHHHHHHHHHHHC--------CHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEeCCCCChHHHhcCEeeeecCCCcccccchHHHHHHHHHHHHHHHHhcc--------HHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998888765543 245778899999
Q ss_pred HHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEc
Q psy1915 232 EQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILT 311 (361)
Q Consensus 232 ~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~ 311 (361)
+.++++++. .++++++.+.+.++++|+|+|++|++|+|++||++|++++|+++|+++||+|||+++++++++||++.+
T Consensus 184 ~~~~~~l~~--~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~ALKlkE~~~i~ae~~~~~E~~HGP~alv~~~~~vi~~~~ 261 (334)
T 3hba_A 184 QALQAAVDA--EPQLRAGSLTDVKNLVVLGRGFGYAVSKEIALKLKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILDVCI 261 (334)
T ss_dssp HHHHHHHHS--CCSCCGGGTTTCCEEEEEECTHHHHHHHHHHHHHHHHHCCEEEEEETTTCC-----------CEEEEEC
T ss_pred HHHHHHHHH--HHHHHHHHHhCCCeEEEEeCCcCHHHHHHHHHHHHHHcCcceEEecHHhhccchHHhcCCCceEEEEec
Confidence 999998852 245578888899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHcCCcEEEEecCC
Q psy1915 312 RDPVYVKCMNALLQVIARDGRPIVICEKG 340 (361)
Q Consensus 312 ~g~~~~~~~~~~~~~~~~g~~~v~I~~~~ 340 (361)
+|++++++.+.+++++++|+++++|++++
T Consensus 262 ~~~~~~~~~~~~~e~~~~g~~v~~i~~~~ 290 (334)
T 3hba_A 262 RDESYGSHVEQIANVKQRGANLIHLHQTS 290 (334)
T ss_dssp CSTTHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CchhHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 99888889999999999999999998754
No 9
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-45 Score=355.58 Aligned_cols=272 Identities=19% Similarity=0.221 Sum_probs=241.9
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYC 153 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~a 153 (361)
.++++++|+|+|+.+|. .++++++++.|+++.+..++++.+....++++|++|+||+||+|++++++++.|
T Consensus 50 ~~~I~i~G~G~S~~~a~---------~~~~~l~~~~g~~v~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~a 120 (373)
T 2aml_A 50 AKEWLILATGSSLNAAQ---------SAKYYIENLADVRITIEEPFNHLYYEKLSSHLDLVIGISQSGQSTSTISALERV 120 (373)
T ss_dssp CCEEEEEECHHHHHHHH---------HHHHHHHHHSSCEEEEECHHHHHHHCCCCTTCCEEEEECSSSCBHHHHHHHHHH
T ss_pred CCEEEEEEecHHHHHHH---------HHHHHHHHHhCCcEEEECchhHHHhccCCCCCCEEEEEcCCCCCHHHHHHHHHH
Confidence 46899999999998875 346888888899999888888765556689999999999999999999999999
Q ss_pred HHc-CCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcch-HHHHHHHHHHHHHHH
Q psy1915 154 KAR-GALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISL-QTRRNEIIKGLKVIH 231 (361)
Q Consensus 154 k~~-g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~-~~~~~~~~~~l~~l~ 231 (361)
|++ |+++|+||++++|||++.||++|.++.++|.+++.|++|+++++.++++++.++..++.. .++++++++.|+++|
T Consensus 121 k~~~Ga~vIaIT~~~~S~La~~ad~~l~~~~~~E~~~~~t~s~ts~~~~l~ll~~~l~~~~g~~~~~~~~~~~~~l~~l~ 200 (373)
T 2aml_A 121 KKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLMLTGLHFAYKTVQIDETRFNNEISAFSRAI 200 (373)
T ss_dssp HHHCCCCEEEEESCTTSGGGGGCSEEEECSCCCCCSSSCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHhCCCcEEEEECCCCChHHHhcCcceecCCCccccccccccHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 999 999999999999999999999999999999888899999999999999998887765533 345778899999999
Q ss_pred HHHHHHHcc-cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEE
Q psy1915 232 EQIREVLQM-DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMIL 310 (361)
Q Consensus 232 ~~~~~~l~~-~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~ 310 (361)
+.++.+++. .++++++|+.+.+.++++|+|+|++|++|+|++||++|++++|+++|+++||+|||+++++++++||++.
T Consensus 201 ~~~~~~l~~~~~~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~aLKl~E~s~i~a~~~~~~E~~HGp~ali~~~~~vi~l~ 280 (373)
T 2aml_A 201 DAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLE 280 (373)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHTTCCCEEEEECTTHHHHHHHHHHHHHHHTCSCEEEEEHHHHTTTGGGGCCTTCEEEEEE
T ss_pred HHHHHHHHhhHHHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHHHHHHHHhhhhceeccHHHhccccHHhcCCCCeEEEEE
Confidence 999999974 4589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcC-CCCC
Q psy1915 311 TRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVP-HTVD 359 (361)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p-~~~~ 359 (361)
++|+..+++.+.+++++++|+++++|++++ + . .+.++.+| ..++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~g~~v~~i~~~~---~-~-~~~~i~ip~~~~~ 325 (373)
T 2aml_A 281 TASAVTERLVLLRDYESKYTPFTYTVKFGK---G-E-DDRTLVIPTDLDE 325 (373)
T ss_dssp CCSTTHHHHHHHHHHHTTTCSCEEEEEESC---C-S-STTEEEECSCCCT
T ss_pred CCCchHHHHHHHHHHHHHcCCcEEEEECCC---C-C-CCcEEEcCCCCcc
Confidence 888877889999999999999999999764 2 1 34678888 3444
No 10
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=100.00 E-value=1.3e-44 Score=370.07 Aligned_cols=308 Identities=33% Similarity=0.504 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHHHhhhhccC-----ccce------eeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLF-----PGEC------VATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELP 112 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~-----~~~~------~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~ 112 (361)
.+.+.+.+..++|......... .+.+ .+...++++++|+|+|+++|. .++++++++.|++
T Consensus 251 ~m~keI~eqp~~~~~~l~~~~~~~~~~l~~~~~~~~~~i~~~~~I~i~G~G~S~~~a~---------~~~~~~~~~~~~~ 321 (608)
T 2bpl_A 251 YMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGM---------VSRYWFESLAGIP 321 (608)
T ss_dssp HHHHHHHTHHHHHHHHHTTSEETTEECCGGGCTTHHHHHHHCCEEEEEECHHHHHHHH---------HHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcCccchhhhccchhhHhcCCCEEEEEEehHHHHHHH---------HHHHHHHHHhCCC
Confidence 5777777777777776643211 1111 134457999999999998775 3578888889999
Q ss_pred eEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcC-CeEEEEEcCCCCccccccCeeEEcccCCCccccc
Q psy1915 113 VMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYCKARG-ALIVGVTNTVGSSISRESHCGIHINAGPEIGVAS 191 (361)
Q Consensus 113 ~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g-~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~ 191 (361)
+.+..++++.+....++++|++|+||+||+|++++++++.||++| +++|+||++++|||++.||++|.++.++|.++++
T Consensus 322 ~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~~IaIT~~~~S~La~~ad~~l~~~~~~E~~~a~ 401 (608)
T 2bpl_A 322 CDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVAS 401 (608)
T ss_dssp EEEEEHHHHTTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCSEEEEEESSTTCHHHHHSSEEEECCCCCCCSSSC
T ss_pred EEEEehhHhhccCCCCCCCCEEEEEeCCcCCHHHHHHHHHHHHcCCCeEEEEECCCCCHHHHhcCEEEEecCCceeeecc
Confidence 999888888666667899999999999999999999999999999 9999999999999999999999999999988899
Q ss_pred chhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHH
Q psy1915 192 TKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCME 271 (361)
Q Consensus 192 t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e 271 (361)
|++|++|++++++|+..++..++...++++++.+.|+.+|+.++++++..++++++++.+.+.++++++|+|.+|++|+|
T Consensus 402 t~s~t~~l~~~~lL~~~l~~~~~~~~~~~~~~~~~l~~lp~~~~~~l~~~~~~~~la~~l~~~~~~~~lG~G~~~~~A~e 481 (608)
T 2bpl_A 402 TKAFTTQLTVLLMLVAKLSKLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALE 481 (608)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHGGGTTCCEEEEEECGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhCCCeEEEEecCcCHHHHHH
Confidence 99999999999999998887765224567889999999999999999866779999999999999999999999999999
Q ss_pred HHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccce
Q psy1915 272 GALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKT 351 (361)
Q Consensus 272 ~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~ 351 (361)
++|||+|++++||++|+++||+|||+.+++++++||++.++|+.++++.+.+++++++|+++++|+++++..+...+|.+
T Consensus 482 ~alKl~E~s~i~ae~~~a~e~~HGp~~lv~~~~~vi~i~~~~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~~~~~~~ 561 (608)
T 2bpl_A 482 GALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHI 561 (608)
T ss_dssp HHHHHHHHHCCEEEEEEGGGGGGTGGGGCCTTCEEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEETTSCCCCBTTEEE
T ss_pred HHHHHHHhccccceeecHHHhhhchHHHcCCCceEEEEECCChhHHHHHHHHHHHHHcCCeEEEEECCCchhhcccCCcE
Confidence 99999999999999999999999999999999999999999988878999999999999999999987545555556788
Q ss_pred EEcCCCCCC
Q psy1915 352 LEVPHTVDC 360 (361)
Q Consensus 352 i~~p~~~~~ 360 (361)
|.+|.+++.
T Consensus 562 i~~p~~~~~ 570 (608)
T 2bpl_A 562 IEMPHVEEV 570 (608)
T ss_dssp EEECCCCGG
T ss_pred EEcCCCcch
Confidence 999987654
No 11
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=100.00 E-value=3.3e-45 Score=354.84 Aligned_cols=262 Identities=15% Similarity=0.194 Sum_probs=222.3
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccc---cCCCCCCCCEEEEEcCCCCcHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLD---RNTPVFRDDVCFFISQSGETADSLMAL 150 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~---~~~~~~~~dlvI~iS~SG~t~e~~~a~ 150 (361)
.++|+++|+|+|+++|... +++++++.|+++.+..++++.. .....+++|++|+||+||+|+|+++++
T Consensus 58 ~~~I~i~G~GtS~~aa~~~---------~~~l~~~~g~~v~ai~~~~~~~~~~~~~~~~~~dlvI~iS~SGeT~e~l~al 128 (393)
T 3odp_A 58 NAKIVITGAGSSAFVGNSV---------VSYLNAKENIKIEAIATTDIVSHPFYYLKKDEPTLLISCARSGNSPESTAAV 128 (393)
T ss_dssp TCEEEEECSTHHHHHHHTT---------HHHHHHHSSSEEEECCHHHHTTCGGGTCCTTSCEEEEEEESSSCCHHHHHHH
T ss_pred CCEEEEEEechHHHHHHHH---------HHHHHHHhCCCeEEeCcHHHHhhhHHhcCCCCCcEEEEEeCCCCCHHHHHHH
Confidence 3689999999999988643 6788888899988665444321 111127899999999999999999999
Q ss_pred HHHHHc--CCeEEEEEcCCCCccccccC-----eeEEcccC-CCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHH
Q psy1915 151 RYCKAR--GALIVGVTNTVGSSISRESH-----CGIHINAG-PEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNE 222 (361)
Q Consensus 151 ~~ak~~--g~~~i~IT~~~~S~la~~ad-----~~l~~~~~-~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~ 222 (361)
+.||++ |+++|+|||+++|||++.|| +.+.++.+ +|.++++|++|++|++++++|+... ..++
T Consensus 129 ~~ak~~~~Ga~~iaIT~~~~S~La~~aD~~~~~~~i~~~~~~~E~~va~Tksft~ql~~l~ll~~~~---------~~~~ 199 (393)
T 3odp_A 129 TLAEKIVDDISHLIITCNSEGKLALHAKRNYNSFLLLMPEESNDKGFAMTGSFSTMLLSCLLIFNLD---------KLES 199 (393)
T ss_dssp HHHHHHCSSEEEEEEESCTTSHHHHGGGSSSCEEEEECCGGGSCCSSSCSHHHHHHHHHHHHTTCTT---------SHHH
T ss_pred HHHHhhcCCCcEEEEECCCCCHHHHHhcCCCceEEEEcCCccccccccccHHHHHHHHHHHHHHhhc---------cHHH
Confidence 999999 99999999999999999999 57888876 7989999999999998877764321 2456
Q ss_pred HHHHHHHHHHHHHHHHccc-HHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhC--cceEEEecCCccccCccC
Q psy1915 223 IIKGLKVIHEQIREVLQMD-SEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTY--MHSEGIMAGELKHGPLAL 299 (361)
Q Consensus 223 ~~~~l~~l~~~~~~~l~~~-~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~--~~a~~~~~~E~~Hgp~~~ 299 (361)
+.+.|+.+|+.++++++.. ++++++++. +.++++|+|+|++|++|+|++||++|+++ +|+.+++++||+|||+++
T Consensus 200 ~~~~l~~lp~~~~~~l~~~~~~~~~~a~~--~~~~~~~lGrG~~~~~A~E~ALKlkE~s~g~i~a~~~~~~e~~HGP~al 277 (393)
T 3odp_A 200 IGKQIESISMQGEKVLVNNVELMKKIVGE--KFKRTVYLGAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSI 277 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCSEEEEECCTHHHHHHHHHHHHHHHHTTSSSEEEEECHHHHTTTGGGG
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhc--CCCeEEEEeCCcCHHHHHHHHHHHHHHhhccchheeecHhhheeccccc
Confidence 7788999999999999743 677888776 88999999999999999999999999984 999999999999999999
Q ss_pred ccCCCcEEEEEcCCcc-HHHHHHHHHHHHHcC--CcEEEEecCCCchhhhcccceEEcC
Q psy1915 300 IDNSMPVIMILTRDPV-YVKCMNALLQVIARD--GRPIVICEKGDTETQALATKTLEVP 355 (361)
Q Consensus 300 i~~~~~vi~i~~~g~~-~~~~~~~~~~~~~~g--~~~v~I~~~~~~~~~~~~d~~i~~p 355 (361)
++++++||++.+.|+. +....+.+++++++| +++++|++.++..+...+|.+|.+|
T Consensus 278 vd~~~pvi~~~~~d~~t~~~~~~~~~ev~arg~~~~vi~i~~~~~~~~~~~~~~~i~~p 336 (393)
T 3odp_A 278 IDDETLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLAISEYEDKLIEDNSDYFIAIN 336 (393)
T ss_dssp CCTTEEEEEECCSSHHHHHHHHHHHHHHHHSSSCCEEEEEEEECCHHHHTTCSEEEEEE
T ss_pred cCCCceEEEEEcCCchhhHHHHHHHHHHHhcCCCceEEEEEcCCcchhccCCcEEEEeC
Confidence 9999999999988874 323346899999988 9999999888767777789999999
No 12
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=100.00 E-value=5.4e-44 Score=341.61 Aligned_cols=249 Identities=17% Similarity=0.264 Sum_probs=215.8
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhc-CCceEEEecccccccCC-CCCCCCEEEEEcCCCCcHHHHHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT-ELPVMVELASDFLDRNT-PVFRDDVCFFISQSGETADSLMALRY 152 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~-g~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t~e~~~a~~~ 152 (361)
++|+++|+|+|++++. .+++++++.. |+++.+..++++.+... .++++|++|+||+||+|++++++++.
T Consensus 41 ~~I~i~G~GtS~~aa~---------~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~T~e~l~a~~~ 111 (347)
T 3fkj_A 41 ERVWFVGCGGSLTGFW---------PGKYFLDCEASKLAVGYITSNEFVHATPKALGKNSVVILASQQGNTAETVAAARV 111 (347)
T ss_dssp CEEEEEESTHHHHTTH---------HHHHHHHHHCSSCEEEEEEHHHHHHSCCTTCSTTEEEEEEESSSCCHHHHHHHHH
T ss_pred CEEEEEEehHHHHHHH---------HHHHHHHHHhCCCeEEEeCcHHHHhhCcCCCCCCCEEEEEeCCCCcHHHHHHHHH
Confidence 5899999999998875 3478888877 99999999999865443 57899999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCccccccCeeEEcccC---CCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q psy1915 153 CKARGALIVGVTNTVGSSISRESHCGIHINAG---PEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKV 229 (361)
Q Consensus 153 ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~---~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~ 229 (361)
||++|+++|+|||+++|||++.||++|.++++ +|.++ +|++|+ .++++++.++..++. .++++++++.|++
T Consensus 112 ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~g~~e~~~-~t~~~~----~l~llal~l~~~~~~-~~~~~~~~~~l~~ 185 (347)
T 3fkj_A 112 AREKGAATIGLVYQPDTPLCEYSDYIIEYQWARYPETVDP-AQQKAA----YSLWLALEILAQTEG-YAQYDELVSAFGR 185 (347)
T ss_dssp HHHHTCEEEEEESSTTCHHHHTCSEEEECBCCCTTSCCCG-GGBHHH----HHHHHHHHHHHHHTC-CTTHHHHHHHHHT
T ss_pred HHHCCCcEEEEeCCCCChHHhhcCeEEEeccCCCCCccch-hHHHHH----HHHHHHHHHHHHhCC-HHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 56554 788876 334455545544332 2356788999999
Q ss_pred HHHHHHHHHcc-cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHH-HHHHHhhCcceEEEecCCccccCccCccCCCcEE
Q psy1915 230 IHEQIREVLQM-DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGA-LKIKELTYMHSEGIMAGELKHGPLALIDNSMPVI 307 (361)
Q Consensus 230 l~~~~~~~l~~-~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~a-lkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi 307 (361)
+|+.+++++++ +++++++++.+.+.++++|+|+|++|++|+|++ |||+|++++|+++|+++||+|||+++++++++||
T Consensus 186 lp~~~~~~l~~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~E~A~LKlkE~s~i~ae~~~a~E~~HGP~ali~~~~pvi 265 (347)
T 3fkj_A 186 FSDVVHGAQRQVQEDAQRFAAEWKDEKVVYMMGSGPSFGAAHQESICILLEMQWINSASIHSGEYFHGPFEITEPGTPFI 265 (347)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHHHHHTHHHHHCCEEEEEETTGGGGTGGGGCCTTCEEE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhCCCcEEEEECCCCHHHHHHHHHHHHHHHcCcCcceeeHHHhcCCcccccCCCceEE
Confidence 99999999974 678999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEcCCccHHHHHHHHHHHHHcCCcEEEEec
Q psy1915 308 MILTRDPVYVKCMNALLQVIARDGRPIVICE 338 (361)
Q Consensus 308 ~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~ 338 (361)
++.+.|++++...++.++++++|+++++|++
T Consensus 266 ~~~~~d~~~~~~~~~~~~~~~~g~~v~~i~~ 296 (347)
T 3fkj_A 266 LLQSSGRTRPLDDRAIRFIERYQGKLQLIDA 296 (347)
T ss_dssp EEECSSTTHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred EEecCCchHHHHHHHHHHHHHhCCeEEEEeC
Confidence 9999988876566777778888899888864
No 13
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=100.00 E-value=6e-44 Score=339.32 Aligned_cols=249 Identities=21% Similarity=0.315 Sum_probs=215.1
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhc-CCceEEEecccccccC-CCCCCCCEEEEEcCCCCcHHHHHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT-ELPVMVELASDFLDRN-TPVFRDDVCFFISQSGETADSLMALRY 152 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~-g~~~~~~~~~e~~~~~-~~~~~~dlvI~iS~SG~t~e~~~a~~~ 152 (361)
++|+++|+|+|+++|. .+++++++.. |+++.+..++++.+.. ..++++|++|+||+||+|++++++++.
T Consensus 26 ~~I~i~G~GtS~~aa~---------~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~T~e~l~a~~~ 96 (329)
T 3eua_A 26 DHVFFVACGGSSAIMY---------PSKYVFDRESKSINSDLYSANEFIQRNPVQLGEKSLVILCSHSGNTPETVKAAAF 96 (329)
T ss_dssp CEEEEEECTHHHHTTH---------HHHHHHHHHCSSCEEEEEEHHHHHHHCCTTCSTTEEEEEEESSSCCHHHHHHHHH
T ss_pred CEEEEEEccHHHHHHH---------HHHHHHHHhcCCCeEEEEccHHHHhcCccCCCCCcEEEEEcCCCCCHHHHHHHHH
Confidence 6899999999998875 3478888877 9999999999886554 367899999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHH
Q psy1915 153 CKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHE 232 (361)
Q Consensus 153 ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~ 232 (361)
||++|+++|+|||+++|||++.||++|.+++|+|.++++| +++ .+++|++.++..++. .++++++++.|.++|+
T Consensus 97 ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~e~~va~t-~~~----~l~~la~~l~~~~~~-~~~~~~~~~~l~~lp~ 170 (329)
T 3eua_A 97 ARGKGALTIAMTFKPESPLAQEAQYVAQYDWGDEALAINT-NYG----VLYQIVFGTLQVLEN-NTKFEQAIEGLDQLQA 170 (329)
T ss_dssp HHHTTCEEEEEESCTTSHHHHHSSEEEECCCSTTCCGGGS-HHH----HHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEECCCCChHHHhCCEEEEeCCCCccchhhH-HHH----HHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888766 344 334444444443321 2346778899999999
Q ss_pred HHHHHHcc-cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHH-HHHHHhhCcceEEEecCCccccCccCccCCCcEEEEE
Q psy1915 233 QIREVLQM-DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGA-LKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMIL 310 (361)
Q Consensus 233 ~~~~~l~~-~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~a-lkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~ 310 (361)
.+++++++ +++++++++.+.+.++++|+|+|++|++|+|++ |||+|++++|+++|+++||+|||+++++++++||++.
T Consensus 171 ~~~~~l~~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~E~A~LKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~ 250 (329)
T 3eua_A 171 VYEKALKQEADNAKQFAKAHEKESIIYTMASGANYGVAYSYSICILMEMQWIHSHAIHAGEYFHGPFEIIDESVPFIILL 250 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSBCEEEECGGGHHHHHHHHHTTTHHHHCCBCCEEETTGGGGTGGGGCCTTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcCHHHHHHHHHHHHHHHcccCcccccHHHhccCcHhhccCCceEEEEE
Confidence 99999974 678999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHcCCcEEEEec
Q psy1915 311 TRDPVYVKCMNALLQVIARDGRPIVICE 338 (361)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~g~~~v~I~~ 338 (361)
+.|++++...++.++++++|++++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~~v~~i~~ 278 (329)
T 3eua_A 251 GLDETRPLEERALTFSKKYGKKLTVLDA 278 (329)
T ss_dssp CSSTTHHHHHHHHHHHHHHCCCEEEEEG
T ss_pred CCCcchHHHHHHHHHHHHcCCeEEEEeC
Confidence 9998876566666777778888888865
No 14
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=100.00 E-value=3.2e-43 Score=336.10 Aligned_cols=273 Identities=18% Similarity=0.248 Sum_probs=229.9
Q ss_pred HHHHHHHHHHHHHHHhhhh---ccCccc----eeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEE
Q psy1915 44 HLARHIAIMEGAFALCFKS---KLFPGE----CVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVE 116 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~---~~~~~~----~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~ 116 (361)
.+.+++.+.+++|...... ....++ +...+.++++++|+|+|+.+|.. +++++++..|+++.+.
T Consensus 15 ~m~keI~eqP~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~I~i~G~G~S~~~a~~---------~~~~l~~~~g~~v~~~ 85 (342)
T 1j5x_A 15 KTLKEITDQKNELKKFFENFVLNLEKTEIFSEIQKNLTDEVLFVGCGSSYNLALT---------ISYYFERVLKIRTKAI 85 (342)
T ss_dssp HHHHHHHHHHHTHHHHHHHTGGGTTC------C----CCEEEEEESTHHHHHHHH---------HHHHHHHHHCCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhCCCCEEEEEEchHHHHHHHH---------HHHHHHHhhCCeEEEE
Confidence 4455566666666555543 110011 23445679999999999988852 3677777789999998
Q ss_pred ecccccccCCCCCCC-CEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhH
Q psy1915 117 LASDFLDRNTPVFRD-DVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAY 195 (361)
Q Consensus 117 ~~~e~~~~~~~~~~~-dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~ 195 (361)
.++++.+......++ |++|+||+||+|++++++++.||++|+++|+||++++|||++.||++|.++. +|.++++|++|
T Consensus 86 ~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~~~~-~e~~~a~t~s~ 164 (342)
T 1j5x_A 86 PAGEVAFQKIPDLEERGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFPV-REEAIVMTKSF 164 (342)
T ss_dssp EHHHHHTTCSCCCCSSEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEECCC-CCCSSSCCHHH
T ss_pred CchHHHhcCcccCCCCeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEEcCC-CcceecchHHH
Confidence 888875555567788 9999999999999999999999999999999999999999999999999988 78788889999
Q ss_pred HHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH-HHHhcCCeEEEEeccCCHHHHHHHHH
Q psy1915 196 TSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLA-KEMYEQKSMLLMGRGYNYATCMEGAL 274 (361)
Q Consensus 196 t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~a-~~l~~~~~i~~iG~G~~~~~A~e~al 274 (361)
++|++++++|+..++..+. +.++.+|+.++++++. ++++++ +.+.+.++++++|+|++|++|+|+++
T Consensus 165 ~~~l~~l~~L~~~l~~~~~----------~~l~~l~~~~~~~l~~--~~~~~a~~~l~~~~~~~~lG~G~~~~~A~e~aL 232 (342)
T 1j5x_A 165 SMILLSLMFLADKIAGNST----------ERFSELVGYSPEFFDI--SWKVIEKIDLKEHDHFVFLGMSEFFGVSLESAL 232 (342)
T ss_dssp HHHHHHHHHHHHHHHTCCC----------HHHHHHHHHHHHHHHH--HHHHHHTSCGGGCCEEEEECCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHH--HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHH
Confidence 9999999999887765421 5678889888888854 478888 88889999999999999999999999
Q ss_pred HHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecC
Q psy1915 275 KIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEK 339 (361)
Q Consensus 275 kl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~ 339 (361)
||+|++++|+++++++||+|||+++++++++||++.++| +++++.+.+++++++|+++++|+++
T Consensus 233 Kl~E~s~i~a~~~~~~E~~HGp~~~v~~~~~vi~~~~~~-~~~~~~~~~~~~~~~g~~v~~i~~~ 296 (342)
T 1j5x_A 233 KCIEMSLTFSEAYSTLEYRHGPKALVKKGTLVFMQKVSG-MDEQEKRLRKELESLGATVLEVGEG 296 (342)
T ss_dssp HHHHHHCCEEEEECGGGGGTTGGGGCCTTEEEEEECCTT-CHHHHHHHHHHHHHTTCEEEEESTT
T ss_pred HHHHHhhhheeeccHHHhcCCchhhhCCCceEEEEECCc-hHHHHHHHHHHHHHcCCeEEEEecC
Confidence 999999999999999999999999999999999999988 8889999999999999999999865
No 15
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=100.00 E-value=1.1e-43 Score=337.09 Aligned_cols=257 Identities=19% Similarity=0.268 Sum_probs=225.3
Q ss_pred eccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCC--CEEEEEcCCCCcHHHHHH
Q psy1915 72 TRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRD--DVCFFISQSGETADSLMA 149 (361)
Q Consensus 72 ~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~--dlvI~iS~SG~t~e~~~a 149 (361)
...++++++|+|+|+++|. .+++++++..|+++. ..++++.+..+.++++ |++|+||+||+|++++++
T Consensus 29 ~~~~~I~i~G~G~S~~~a~---------~~~~~l~~~~g~~v~-~~~se~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a 98 (325)
T 2e5f_A 29 SLPNRILYLGCGSSHFLSK---------LLAMVTNMHGGLGIA-LPCSEFLYSKETYPIGEVELAVGISRSGETTEILLA 98 (325)
T ss_dssp CCCSEEEEEESTHHHHHHH---------HHHHHHHHTTSEEEE-EEHHHHHHHGGGSCCCSCSEEEEECSSSCCHHHHHH
T ss_pred hCCCEEEEEEChHHHHHHH---------HHHHHHHHHhCCCEE-EechHHhhcCcccCCCCCeEEEEEeCCCCCHHHHHH
Confidence 3346899999999998875 346788887899988 7777776555568899 999999999999999999
Q ss_pred HHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q psy1915 150 LRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKV 229 (361)
Q Consensus 150 ~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~ 229 (361)
++.|| +++|+||++ +|||++.||++|.++. +|.++++|++|++|++++++|...++.. + + +.+++
T Consensus 99 ~~~ak---a~viaIT~~-~S~La~~ad~~l~~~~-~e~~~a~t~s~~~~l~~l~~L~~~~~~~--------~-~-~~l~~ 163 (325)
T 2e5f_A 99 LEKIN---VKKLGITTR-ESSLTRMCDYSLVVPA-IEESVVMTHSFTSFYFAYLQLLRYSYGL--------P-P-LNAGE 163 (325)
T ss_dssp HHTCC---SCEEEEESS-SCHHHHHSSEEEECCC-CCCSSSCCHHHHHHHHHHHHHHHHHTTC--------C-C-CCHHH
T ss_pred HHHhC---CCEEEEECC-CCHHHHhcCEEEecCC-ccceecccHHHHHHHHHHHHHHHHHHHH--------H-H-HHHHH
Confidence 99999 999999999 9999999999999988 8888899999999999999998877653 1 2 56788
Q ss_pred HHHHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEE
Q psy1915 230 IHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 309 (361)
Q Consensus 230 l~~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i 309 (361)
+|+.++++++..++++++++.+.+ ++++|+|+|++|++|+|++|||+|++++|+++++++||+|||+++++++++||++
T Consensus 164 l~~~~~~~l~~~~~~~~~a~~~~~-~~~~~lG~G~~~~~A~E~aLKl~E~~~i~a~~~~~~E~~HGp~~li~~~~~vi~~ 242 (325)
T 2e5f_A 164 ISKATEKSLEYERYIREIVESFDF-QNIIFLGSGLLYPVALEASLKMKEMSIFWSEAYPTFEVRHGFKAIADEKTLVVLM 242 (325)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHCCC-SEEEEEECTTHHHHHHHHHHHHHHHHCCEEEEEEGGGGGTTGGGGCSTTEEEEEE
T ss_pred HHHHHHHHHcChHHHHHHHHHhcC-CCEEEEccCCCHHHHHHHHHHHHHHHHHHhhhcCHHHhhhccHhhcCCCCeEEEE
Confidence 999999999766789999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcc-cceEEcCCCCCC
Q psy1915 310 LTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALA-TKTLEVPHTVDC 360 (361)
Q Consensus 310 ~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~-d~~i~~p~~~~~ 360 (361)
. |+.++++.+.+++++++|+++++|+++++ +.. |..+.+|..++.
T Consensus 243 ~--~~~~~~~~~~~~e~~~~g~~v~~i~~~~~----~~~~~~~~~~p~~~~~ 288 (325)
T 2e5f_A 243 V--EEPFEWHEKLVKEFKNQGAKVLVISNSPQ----DLGQDYSIELPRLSKD 288 (325)
T ss_dssp E--SSCCHHHHHHHHHHHHTTCEEEEEESCCC----CCSCSEEEECCCCCTT
T ss_pred e--CchHHHHHHHHHHHHHcCCeEEEEeCCcc----cccCCcEEEeCCCchh
Confidence 9 66667899999999999999999997643 234 577888876654
No 16
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=100.00 E-value=4.1e-44 Score=346.73 Aligned_cols=244 Identities=18% Similarity=0.212 Sum_probs=207.8
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCc---eEEEeccc-----ccccCCCCCCCCEEEEEcCCCCcHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELP---VMVELASD-----FLDRNTPVFRDDVCFFISQSGETADS 146 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~---~~~~~~~e-----~~~~~~~~~~~dlvI~iS~SG~t~e~ 146 (361)
++|+++|||+|+++|. .+++++++..|++ +.+..+.+ +.+.. .+++|++|+||+||+|+++
T Consensus 57 ~~I~i~G~GtS~~aa~---------~~~~~l~~~~g~~~~~v~a~~~~~~~ase~~~~~--~~~~dl~i~iS~SG~T~e~ 125 (389)
T 3i0z_A 57 IKVILTGAGTSAYVGD---------TLLPYFKEVYDERKWNFNAIATTDIVANPATYLK--KDVATVLVSFARSGNSPES 125 (389)
T ss_dssp EEEEEECSTHHHHHHH---------HHHHHHHHHSCTTTEEEEECCHHHHTTCHHHHCC--TTSEEEEEEEESSSCCHHH
T ss_pred CeEEEEEechHHHHHH---------HHHHHHHHHhCCCCceEEeccccccccChHHhcC--CCCCcEEEEEeCCCCCHHH
Confidence 5899999999999885 3478888888998 66544333 32222 2889999999999999999
Q ss_pred HHHHHHHHHc--CCeEEEEEcCCCCccccccCe-----eEEcc-cCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHH
Q psy1915 147 LMALRYCKAR--GALIVGVTNTVGSSISRESHC-----GIHIN-AGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQT 218 (361)
Q Consensus 147 ~~a~~~ak~~--g~~~i~IT~~~~S~la~~ad~-----~l~~~-~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~ 218 (361)
+++++.||++ |+++|+|||+++|||++.||+ .+.++ .++|.++++|++|++|++++++++... .
T Consensus 126 ~~al~~ak~~~~g~~~i~IT~~~~s~la~~ad~~~~~~~i~~~~~~~E~~va~Tks~t~ql~~l~ll~~~~-----~--- 197 (389)
T 3i0z_A 126 LATVDLAKSLVDELYQVTITCAADGKLALQAHGDDRNLLLLQPAVSNDAGFAMTSSFTSMMLTTLLVFDPT-----E--- 197 (389)
T ss_dssp HHHHHHHHHHCSSEEEEEEESCTTSHHHHTSSSCTTEEEEECCGGGSCCSSSCSHHHHHHHHHHHHHHCCS-----C---
T ss_pred HHHHHHHHhhcCCCcEEEEECCCCCHHHHHccccccceEEecccccccccccccHHHHHHHHHHHHHHHhc-----C---
Confidence 9999999999 999999999999999999998 77777 488999999999999998888775422 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhC--cceEEEecCCccccC
Q psy1915 219 RRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTY--MHSEGIMAGELKHGP 296 (361)
Q Consensus 219 ~~~~~~~~l~~l~~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~--~~a~~~~~~E~~Hgp 296 (361)
.+++.+.|+.+|+.++++++..+.++++++. +.++++|+|+|++|++|+|+|||++|+++ +|+++++++||+|||
T Consensus 198 -~~~~~~~l~~lp~~~~~~l~~~~~i~~~a~~--~~~~~~~lGrG~~y~~A~EgALKlkE~s~Gei~a~~~~~~e~kHGP 274 (389)
T 3i0z_A 198 -FAVKSERFEVVSSLARKVLDKAEDVKELVDL--DFNRVIYLGAGPFFGLAHEAQLKILELTAGQVATMYESPVGFRHGP 274 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTHHHHHHHHTS--CCSEEEEEESTHHHHHHHHHHHHHHHHHTTSSEEEEECHHHHTTTG
T ss_pred -HHHHHHHHHHHHHHHHHHHhChHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHccCcccceeecHhhccccc
Confidence 2356678899999999999865678888876 78999999999999999999999999998 999999999999999
Q ss_pred ccCccCCCcEEEEEcCCcc-HHHHHHHHHHHHHc--CCcEEEEecCC
Q psy1915 297 LALIDNSMPVIMILTRDPV-YVKCMNALLQVIAR--DGRPIVICEKG 340 (361)
Q Consensus 297 ~~~i~~~~~vi~i~~~g~~-~~~~~~~~~~~~~~--g~~~v~I~~~~ 340 (361)
+++++++++||++.+.|+. +....+.+++++++ |+++++|++.+
T Consensus 275 ~alid~~~pVi~~~~~d~~~~~~~~~~~~ev~arg~g~~vi~i~~~~ 321 (389)
T 3i0z_A 275 KSLINDNTVVLVFGTTTDYTRKYDLDLVREVAGDQIARRVVLLSDQA 321 (389)
T ss_dssp GGGCCTTEEEEEECCCSHHHHHHHHHHHHHHHHHTCSSEEEEEESSC
T ss_pred hhhcCCCceEEEEEcCCchhhHHHHHHHHHHHhccCCCeEEEEECCC
Confidence 9999999999999988874 21235778999988 68999998754
No 17
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=100.00 E-value=1.8e-41 Score=325.63 Aligned_cols=249 Identities=18% Similarity=0.286 Sum_probs=213.1
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccC-CCCCCCCEEEEEcCCCCcHHHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRN-TPVFRDDVCFFISQSGETADSLMALRY 152 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~-~~~~~~dlvI~iS~SG~t~e~~~a~~~ 152 (361)
.++++++|+|+|+.+|. .++++++++.|+++.+..++++.+.. ..++++|++|+||+||+|++++++++.
T Consensus 54 ~~~I~i~G~G~S~~~a~---------~~~~~l~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~t~e~~~a~~~ 124 (355)
T 2a3n_A 54 FSSLFFASVGGSLAPMM---------AINEFAKELTTLPVYVEQAAELIHKGNKRLNKDSVVITLSKSGDTKESVAIAEW 124 (355)
T ss_dssp CSCEEEEECGGGHHHHH---------HHHHHHHHHCCSCEEEEEHHHHHHHCCTTCCTTCEEEEECSSSCCHHHHHHHHH
T ss_pred CCEEEEEEccHHHHHHH---------HHHHHHHhhcCCeEEEcCcHHHHhhchhcCCCCCEEEEEeCCCCCHHHHHHHHH
Confidence 46899999999998875 23678888799999998888876544 346899999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHH
Q psy1915 153 CKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHE 232 (361)
Q Consensus 153 ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~ 232 (361)
||++|+++|+||++++|||++.||++|.++.+.+. +++...++++++.+...++. .++++++.+.|+++|+
T Consensus 125 ak~~Ga~vi~IT~~~~S~La~~ad~~l~~~~~~~~--------~~~~~~~~ll~~~l~~~~~~-~~~~~~~~~~l~~l~~ 195 (355)
T 2a3n_A 125 CKAQGIRVVAITKNADSPLAQAATWHIPMRHKNGV--------EYEYMLLYWLFFRVLSRNNE-FASYDRFASQLEILPA 195 (355)
T ss_dssp HHHTTCEEEEEESCTTSHHHHTCSEEEECCCSSCH--------HHHHHHHHHHHHHHHHHTTS-CTTHHHHHHHGGGHHH
T ss_pred HHHCCCeEEEEECCCCChhhHhCCEEEEeCCCcch--------hHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999765432 33344444444444433321 2346678888999999
Q ss_pred HHHHHHcc-cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHH-HHHHHhhCcceEEEecCCccccCccCccCCCcEEEEE
Q psy1915 233 QIREVLQM-DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGA-LKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMIL 310 (361)
Q Consensus 233 ~~~~~l~~-~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~a-lkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~ 310 (361)
.++++++. .++++++|+.+.+.++++|+|+|++|++|+|++ +|++|++++|+++++++||+|||+++++++++||++.
T Consensus 196 ~~~~~l~~~~~~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~allklkE~s~i~a~~~~~~E~~HGp~ali~~~~~vi~l~ 275 (355)
T 2a3n_A 196 NLLKAKQKFDPQADAIASRYHNSDYMMWVGGAEMWGEVYLFSMCILEEMQWKRTRPVSSAEFFHGALELLEKDVPLILVK 275 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSCEEEEECGGGHHHHHHHHHHTHHHHHCCCEEEEEHHHHTTTGGGGCCTTCCEEEEC
T ss_pred HHHHHHHHhHHHHHHHHHHhcCCCcEEEEcCCcCHHHHHHHHHHHHHHHcccccccccHHHhcCCcceeecCCceEEEEe
Confidence 99999874 678999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHcCCcEEEEecCC
Q psy1915 311 TRDPVYVKCMNALLQVIARDGRPIVICEKG 340 (361)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~ 340 (361)
+.|+.++++.+.+++++++|+++++|++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~g~~v~~i~~~~ 305 (355)
T 2a3n_A 276 GEGKCRALDERVERFASKITDNLVVIDPKA 305 (355)
T ss_dssp CSSTTHHHHHHHHHHHHHHCSCEEEECGGG
T ss_pred cCCCcHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 988888888899999999999999998653
No 18
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=100.00 E-value=1.1e-40 Score=323.33 Aligned_cols=258 Identities=16% Similarity=0.190 Sum_probs=211.1
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccC-CCC--CCCCEEEEEcCCCCcHHHHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRN-TPV--FRDDVCFFISQSGETADSLMALR 151 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~-~~~--~~~dlvI~iS~SG~t~e~~~a~~ 151 (361)
++++++|+|+|+++|. .+++++++..|+++.+..+.++.... ... +++|++|+||+||+|++++++++
T Consensus 54 ~~I~i~G~GtS~~~a~---------~~~~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~ 124 (384)
T 3c3j_A 54 LRIILTGAGTSAFIGD---------IIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVE 124 (384)
T ss_dssp CEEEEECSTHHHHHHH---------HHHHHHHHHHCSEEEECCHHHHHHCHHHHCCTTSCEEEEEEESSSCCHHHHHHHH
T ss_pred CEEEEEEehHHHHHHH---------HHHHHHHHHhCCcEEEeccHHHHhChhhhhCCCCCeEEEEEeCCcCCHHHHHHHH
Confidence 6899999999999875 34788887789999887654432111 111 78999999999999999999999
Q ss_pred HHHHc--CCeEEEEEcCCCCccccccC-----eeEEccc-CCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHH
Q psy1915 152 YCKAR--GALIVGVTNTVGSSISRESH-----CGIHINA-GPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEI 223 (361)
Q Consensus 152 ~ak~~--g~~~i~IT~~~~S~la~~ad-----~~l~~~~-~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~ 223 (361)
.||++ |+++|+||++++|||++.|| ++|.++. ++|.++++|++|++|++++++|+...... ++
T Consensus 125 ~ak~~~~ga~~iaIT~~~~S~La~~ad~~~~~~~l~~~~~~~e~~~a~t~s~t~~l~~l~~L~~~~~~~---------~~ 195 (384)
T 3c3j_A 125 LANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETIN---------SQ 195 (384)
T ss_dssp HHHHHCSSEEEEEEESCTTSHHHHHHHTCTTBCCEECCGGGSCCSSSCSHHHHHHHHHHHHHHCTTTSS---------TT
T ss_pred HHHhhCCCCCEEEEECCCCCHHHhhhccCCcEEEEEecCCCcceeeeehHHHHHHHHHHHHHHHhcccc---------HH
Confidence 99999 99999999999999999999 9999987 78888999999999999988876532110 11
Q ss_pred HHHHHHHHHHHHHHHcccHHHHH--HHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhC--cceEEEecCCccccCccC
Q psy1915 224 IKGLKVIHEQIREVLQMDSEVQQ--LAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTY--MHSEGIMAGELKHGPLAL 299 (361)
Q Consensus 224 ~~~l~~l~~~~~~~l~~~~~~~~--~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~--~~a~~~~~~E~~Hgp~~~ 299 (361)
.++.+|+.+++++++.+++++ ++.. +.++++|+|+|.+|++|+|++|||+|+++ +|+.+++++||+|||+++
T Consensus 196 --~l~~l~~~~~~~l~~~~~~~~~~~a~~--~~~~~~~lG~G~~~~~A~E~aLKl~E~s~g~i~a~~~~~~e~~HGp~~l 271 (384)
T 3c3j_A 196 --TFRDVADRCQAILTSLGDFSEGVFGYA--PWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSL 271 (384)
T ss_dssp --TTHHHHHHHHHHHHHTTTSTTCTTCCC--CCSEEEEEESTTHHHHHHHHHHHHHHHTTTSSEEEEECHHHHTTTGGGG
T ss_pred --HHHHHHHHHHHHHHhHHHHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHHHHHHHhhccchhccccHhhcccCCHHH
Confidence 467778888777754334444 4443 67899999999999999999999999998 999999999999999999
Q ss_pred ccCCCcEEEEEcCCcc-HHHHHHHHHHHHHc--CCcEEEEecCCCchhhhcccceEEcCC
Q psy1915 300 IDNSMPVIMILTRDPV-YVKCMNALLQVIAR--DGRPIVICEKGDTETQALATKTLEVPH 356 (361)
Q Consensus 300 i~~~~~vi~i~~~g~~-~~~~~~~~~~~~~~--g~~~v~I~~~~~~~~~~~~d~~i~~p~ 356 (361)
++++++||++.++|+. +..+.+.+++++++ |+++++|++.+ ..+... +.++.+|.
T Consensus 272 v~~~~~vi~~~~~~~~~~~~~~~~~~ev~ar~~~~~v~~i~~~~-~~~~~~-~~~i~~p~ 329 (384)
T 3c3j_A 272 VDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAES-SDIVAA-GPHIILPP 329 (384)
T ss_dssp CCTTEEEEEECCSSTTHHHHHHHHHHHHHHHTCSSEEEEEESSC-CHHHHT-SSEEECCC
T ss_pred cCCCccEEEEEcCCchhhHHHHHHHHHHHhCcCCCeEEEEeCCC-cccccC-CcEEEecC
Confidence 9999999999988886 43378899999877 89999998764 334333 66788886
No 19
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=100.00 E-value=8.7e-34 Score=266.37 Aligned_cols=224 Identities=15% Similarity=0.146 Sum_probs=178.0
Q ss_pred ccCCcEEEEeccccccccccchhhhhHHHHHHHHHhc-CCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHH
Q psy1915 73 RRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT-ELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALR 151 (361)
Q Consensus 73 ~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~-g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~ 151 (361)
..++++++|+|+|+++|.. +++++++.. |.++.+..++++ .+++|++|+||+||+|++++++++
T Consensus 36 ~~~~I~i~G~G~S~~~a~~---------~~~~l~~~~~~~~~~~~~~~~~------~~~~dlvI~iS~SG~T~e~~~a~~ 100 (302)
T 1tzb_A 36 AMPRLYISGMGGSGVVADL---------IRDFSLTWNWEVEVIAVKDYFL------KARDGLLIAVSYSGNTIETLYTVE 100 (302)
T ss_dssp CCSEEEEECCHHHHHHHHH---------HHHHHHHTTCSSEEEEECSSCC------CCSSSEEEEECSSSCCHHHHHHHH
T ss_pred CCCEEEEEEecHHHHHHHH---------HHHHHHhhcCCceEEEeCCcCC------CCCCCEEEEEeCCCCCHHHHHHHH
Confidence 4579999999999998852 357777667 888888877765 278999999999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHH
Q psy1915 152 YCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIH 231 (361)
Q Consensus 152 ~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~ 231 (361)
.||++|+++|+||+++ ||++. |+.+. .++|.. +.+.+|+++++.+.+|...++... ++ +|
T Consensus 101 ~ak~~g~~~iaIT~~~--~La~~-~~~l~--~~~e~~-a~~~s~~~~l~~~~~l~~~~~~~~-------------~~-~~ 160 (302)
T 1tzb_A 101 YAKRRRIPAVAITTGG--RLAQM-GVPTV--IVPKAS-APRAALPQLLTAALHVVAKVYGID-------------VK-IP 160 (302)
T ss_dssp HHHHTTCCEEEEESST--TGGGS-SSCEE--ECCCCS-SGGGGHHHHHHHHHHHHHHHHCCC-------------CC-CC
T ss_pred HHHHCCCeEEEECCCc--hHHHC-CeeEE--eCCCCC-ccHHHHHHHHHHHHHHHHHcCCCc-------------hH-HH
Confidence 9999999999999997 99999 88773 345644 333499999887666554432110 01 22
Q ss_pred HHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEc
Q psy1915 232 EQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILT 311 (361)
Q Consensus 232 ~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~ 311 (361)
+.++.. ..+.++++++++ + +.++++|+|++|++|+|+++||+|++++|+++++.+||+|||+.++++ +||++.+
T Consensus 161 ~~~~~~--~~~~~~~la~~~-~-~~~~~lG~g~~~~~A~e~alkl~E~~~~~a~~~~~~e~~HGp~~~i~~--~vi~~~~ 234 (302)
T 1tzb_A 161 EGLEPP--NEALIHKLVEEF-Q-KRPTIIAAESMRGVAYRVKNEFNENAKIEPSVEILPEAHHNWIEGSER--AVVALTS 234 (302)
T ss_dssp SCCCCC--CHHHHHHHHHHH-T-TCCEEEEEGGGHHHHHHHHHHHHHTTCCCCEEEEETGGGGTHHHHCCS--CEEEEEC
T ss_pred HHHhhh--CchHHHHHHHHh-C-CeEEEEeCCcchHHHHHHHHHHHHhcCcceeccccchhcccceEEecc--cEEEEEC
Confidence 222111 124567888888 6 888999999999999999999999999999999999999999999998 7888877
Q ss_pred -CCc-cHHHHHHHHHHHHHcCCcEEEEecC
Q psy1915 312 -RDP-VYVKCMNALLQVIARDGRPIVICEK 339 (361)
Q Consensus 312 -~g~-~~~~~~~~~~~~~~~g~~~v~I~~~ 339 (361)
+++ ..+++.+.+++++ |+++++|+++
T Consensus 235 ~~~~~~~~~~~~~~~e~~--g~~v~~i~~~ 262 (302)
T 1tzb_A 235 PHIPKEHQERVKATVEIV--GGSIYAVEMH 262 (302)
T ss_dssp SSSCHHHHHHHHHHHHHH--CCEEEECCCS
T ss_pred CCccHHHHHHHHHHHHHh--CceEEEEEcC
Confidence 665 5677888899887 8998888754
No 20
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=99.78 E-value=1.9e-19 Score=156.18 Aligned_cols=127 Identities=18% Similarity=0.237 Sum_probs=103.3
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLD-RNTPVFRDDVCFFISQSGETADSLMALRYC 153 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~a 153 (361)
++++++|+|.|+.+|.... +.+. ..|.++....+.+... ....++++|++|+||+||+|++++++++.|
T Consensus 50 ~~I~i~G~G~S~~~a~~~~---------~~l~-~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~a 119 (183)
T 2xhz_A 50 GKVVVMGMGASGHIGRKMA---------ATFA-STGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVL 119 (183)
T ss_dssp SCEEEEECHHHHHHHHHHH---------HHHH-TTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCCHHHHHHHHHH
T ss_pred CeEEEEeecHHHHHHHHHH---------HHHH-hcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCCHHHHHHHHHH
Confidence 5899999999998774332 2232 2688887776666432 335678999999999999999999999999
Q ss_pred HHcCCeEEEEEcCCCCccccccCeeEEcccCCCc---ccccchhHHHHHHHHHHHHHHHhh
Q psy1915 154 KARGALIVGVTNTVGSSISRESHCGIHINAGPEI---GVASTKAYTSQFISLVMFALVMCE 211 (361)
Q Consensus 154 k~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~---~~~~t~s~t~~~~~l~~l~~~~~~ 211 (361)
|++|+++|+||++++|||+++||++|.++.++|. ....+.+++++++++++|...+..
T Consensus 120 k~~g~~vi~IT~~~~s~la~~ad~~l~~~~~~e~~~~~~~~~~S~~~~~~~~d~L~~~~~~ 180 (183)
T 2xhz_A 120 KRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLK 180 (183)
T ss_dssp HTTTCCEEEEESCTTSHHHHHSSEEEECCCSCCSSTTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEECCCCChhHHhCCEEEEeCCCccccccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999876653 345678899999998888776654
No 21
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=99.78 E-value=6.7e-19 Score=153.19 Aligned_cols=127 Identities=13% Similarity=0.029 Sum_probs=103.4
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEe-c-ccccccCCCCCCCCEEEEEcCCCCcHHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVEL-A-SDFLDRNTPVFRDDVCFFISQSGETADSLMALR 151 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~-~-~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~ 151 (361)
.++++++|+|.|+.+|.+. .+.+.+ +|.++.+.. + .++......++++|++|+||+||+|++++++++
T Consensus 39 a~~I~i~G~G~S~~~a~~~---------~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~ 108 (187)
T 3sho_A 39 ADHVIVVGMGFSAAVAVFL---------GHGLNS-LGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALA 108 (187)
T ss_dssp CSEEEEECCGGGHHHHHHH---------HHHHHH-TTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHH
T ss_pred CCEEEEEecCchHHHHHHH---------HHHHHh-cCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 4689999999999888643 344443 799988876 3 334334457889999999999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhh
Q psy1915 152 YCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDR 213 (361)
Q Consensus 152 ~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~ 213 (361)
.||++|+++|+||++++|||+++||++|.++.+++. .+.+++++++++++|...+....
T Consensus 109 ~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~~~---~~~S~~~~~~l~d~L~~~~~~~~ 167 (187)
T 3sho_A 109 GAAERGVPTMALTDSSVSPPARIADHVLVAATRGVG---HSLSPVGLIAVVNLLLAEIAVRE 167 (187)
T ss_dssp HHHHTTCCEEEEESCTTSHHHHHCSEEEECCCCCSS---SSCCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCEEEEeCCCCCcchhhCcEEEEecCCCCc---ccccHhHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999875442 24577888888888887776543
No 22
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=99.78 E-value=9.9e-19 Score=156.37 Aligned_cols=131 Identities=16% Similarity=0.197 Sum_probs=109.9
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEeccccccc-CCCCCCCCEEEEEcCCCCcHHHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDR-NTPVFRDDVCFFISQSGETADSLMALRY 152 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~-~~~~~~~dlvI~iS~SG~t~e~~~a~~~ 152 (361)
.++++++|+|.|+.+|.+.. +.+. .+|.++.+..+.++... ...++++|++|+||+||+|++++++++.
T Consensus 59 a~~I~i~G~G~S~~~A~~~~---------~~l~-~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ 128 (220)
T 3etn_A 59 KGKLVTSGMGKAGQIAMNIA---------TTFC-STGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQL 128 (220)
T ss_dssp CCCEEEECSHHHHHHHHHHH---------HHHH-HTTCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHH
T ss_pred CCEEEEEEecHHHHHHHHHH---------HHHH-hcCCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHH
Confidence 57999999999998886443 3344 37899988877776432 3568899999999999999999999999
Q ss_pred HHH--cCCeEEEEEcCCCCccccccCeeEEcccCCCc---ccccchhHHHHHHHHHHHHHHHhhhhc
Q psy1915 153 CKA--RGALIVGVTNTVGSSISRESHCGIHINAGPEI---GVASTKAYTSQFISLVMFALVMCEDRI 214 (361)
Q Consensus 153 ak~--~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~---~~~~t~s~t~~~~~l~~l~~~~~~~~~ 214 (361)
||+ +|+++|+||++++|||+++||++|.++.++|. ...++.+++++++++++|...++..++
T Consensus 129 ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~~~~~e~~~~~~~~~~S~~~~l~lld~L~~~l~~~~g 195 (220)
T 3etn_A 129 AHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAEVCTLGMTPTTSTTVMTVIGDILVVQTMKRTE 195 (220)
T ss_dssp HHHHCTTCEEEEEESCTTSHHHHHSSEEEECCCCCCCSTTSCSSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCCeEEEEECCCCChhHHhCCEEEEcCCCcccccccccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 999 99999999999999999999999999887662 345678999999999999887776554
No 23
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=99.77 E-value=4.8e-19 Score=156.03 Aligned_cols=130 Identities=20% Similarity=0.265 Sum_probs=107.5
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLD-RNTPVFRDDVCFFISQSGETADSLMALRYC 153 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~a 153 (361)
++++++|+|.|+.+|.+. .+.+.+ +|+++....+.++.. ....++++|++|+||+||+|++++++++.|
T Consensus 46 ~~I~i~G~G~S~~~A~~~---------~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~a 115 (201)
T 3fxa_A 46 GKIVVAGCGTSGVAAKKL---------VHSFNC-IERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPAC 115 (201)
T ss_dssp SCEEEECCTHHHHHHHHH---------HHHHHH-TTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHH
T ss_pred CcEEEEEecHHHHHHHHH---------HHHHHh-cCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHH
Confidence 589999999999887643 344444 699998887776543 234678999999999999999999999999
Q ss_pred HHcCCeEEEEEcCCCCccccccCeeEEcccCCCc---ccccchhHHHHHHHHHHHHHHHhhhhc
Q psy1915 154 KARGALIVGVTNTVGSSISRESHCGIHINAGPEI---GVASTKAYTSQFISLVMFALVMCEDRI 214 (361)
Q Consensus 154 k~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~---~~~~t~s~t~~~~~l~~l~~~~~~~~~ 214 (361)
|++|+++|+||++++|||+++||++|.++.++|. ....+.+++++++++++|...+...++
T Consensus 116 k~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~e~~~~~~~~~~s~~~~l~~~d~L~~~l~~~~g 179 (201)
T 3fxa_A 116 KTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMN 179 (201)
T ss_dssp HHHTCEEEEEESCTTSHHHHHCSEEEECCCSCCCSTTSCSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCeEEEEECCCCChhHHhCCEEEEcCCCccccccCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999887653 224567889999999988887776554
No 24
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=99.74 E-value=1.6e-17 Score=146.36 Aligned_cols=125 Identities=19% Similarity=0.141 Sum_probs=94.7
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYC 153 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~a 153 (361)
.++++++|+|.|+.+|.++. +.+. .+|.++....+. ....++++|++|+||+||+|++++++++.|
T Consensus 47 a~~I~i~G~G~S~~~A~~~~---------~~l~-~~g~~~~~~~~~----~~~~~~~~DvvI~iS~SG~t~~~i~~~~~a 112 (200)
T 1vim_A 47 ARSIFVIGAGRSGYIAKAFA---------MRLM-HLGYTVYVVGET----VTPRITDQDVLVGISGSGETTSVVNISKKA 112 (200)
T ss_dssp SSCEEEECSHHHHHHHHHHH---------HHHH-HTTCCEEETTST----TCCCCCTTCEEEEECSSSCCHHHHHHHHHH
T ss_pred CCEEEEEEecHHHHHHHHHH---------HHHH-hcCCeEEEeCCc----cccCCCCCCEEEEEeCCCCcHHHHHHHHHH
Confidence 46999999999998775432 2222 368777665432 235678999999999999999999999999
Q ss_pred HHcCCeEEEEEcCCCCccccccCeeEEcccCCCccc-------ccchhH--HHHHHHHHHHHHHHhhh
Q psy1915 154 KARGALIVGVTNTVGSSISRESHCGIHINAGPEIGV-------ASTKAY--TSQFISLVMFALVMCED 212 (361)
Q Consensus 154 k~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~-------~~t~s~--t~~~~~l~~l~~~~~~~ 212 (361)
|++|+++|+||++++|||+++||++|.++.+++... .++.++ +++++++++|...+...
T Consensus 113 k~~g~~vI~IT~~~~s~La~~ad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~lld~L~~~~~~~ 180 (200)
T 1vim_A 113 KDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQ 180 (200)
T ss_dssp HHHTCEEEEEESCTTSHHHHHCSEEEECCSSCTTCCHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCeEEEEECCCCChHHHhCCEEEEECCcccccCCcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987665321 133333 34566677766655543
No 25
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=99.73 E-value=1.7e-17 Score=144.26 Aligned_cols=126 Identities=15% Similarity=0.142 Sum_probs=98.8
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYC 153 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~a 153 (361)
.++++++|+|.|+.+|.+. .+.+. .+|.++....+.+ ...++++|++|+||+||+|++++++++.|
T Consensus 37 a~~I~i~G~G~S~~~A~~~---------~~~l~-~~g~~~~~~~~~~----~~~~~~~d~vI~iS~sG~t~~~~~~~~~a 102 (186)
T 1m3s_A 37 SHQIFTAGAGRSGLMAKSF---------AMRLM-HMGFNAHIVGEIL----TPPLAEGDLVIIGSGSGETKSLIHTAAKA 102 (186)
T ss_dssp CSCEEEECSHHHHHHHHHH---------HHHHH-HTTCCEEETTSTT----CCCCCTTCEEEEECSSSCCHHHHHHHHHH
T ss_pred CCeEEEEecCHHHHHHHHH---------HHHHH-hcCCeEEEeCccc----ccCCCCCCEEEEEcCCCCcHHHHHHHHHH
Confidence 3689999999999888643 33443 3788877664432 35678999999999999999999999999
Q ss_pred HHcCCeEEEEEcCCCCccccccCeeEEcccCCCcc-------cccchhH--HHHHHHHHHHHHHHhhhh
Q psy1915 154 KARGALIVGVTNTVGSSISRESHCGIHINAGPEIG-------VASTKAY--TSQFISLVMFALVMCEDR 213 (361)
Q Consensus 154 k~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~-------~~~t~s~--t~~~~~l~~l~~~~~~~~ 213 (361)
|++|+++|+||++++|||+++||++|.++.+++.. ..++.+. +++++++++|...+...+
T Consensus 103 k~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~~~~~~~~~~s~~~~~s~~~~~~~~~~d~L~~~~~~~~ 171 (186)
T 1m3s_A 103 KSLHGIVAALTINPESSIGKQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKK 171 (186)
T ss_dssp HHTTCEEEEEESCTTSHHHHHCSEEEECSCCSCC-----CCCCSSTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHCCCEEEEEECCCCCchHHhCCEEEEeCCccccCCCCcccccccCccHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999998765531 2244454 466788888877665543
No 26
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=99.72 E-value=5.4e-17 Score=140.23 Aligned_cols=125 Identities=13% Similarity=0.109 Sum_probs=99.3
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYC 153 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~a 153 (361)
.++++++|+|.|+.+|.+. .+.+.+ .|.++....+.+ ...++++|++|+||+||+|++++++++.|
T Consensus 40 a~~I~i~G~G~S~~~A~~~---------~~~l~~-~g~~~~~~~~~~----~~~~~~~d~vi~iS~sG~t~~~~~~~~~a 105 (180)
T 1jeo_A 40 AKKIFIFGVGRSGYIGRCF---------AMRLMH-LGFKSYFVGETT----TPSYEKDDLLILISGSGRTESVLTVAKKA 105 (180)
T ss_dssp CSSEEEECCHHHHHHHHHH---------HHHHHH-TTCCEEETTSTT----CCCCCTTCEEEEEESSSCCHHHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHH---------HHHHHH-cCCeEEEeCCCc----cccCCCCCEEEEEeCCCCcHHHHHHHHHH
Confidence 3689999999999888643 344443 788877664432 35678999999999999999999999999
Q ss_pred HHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHH--HHHHHHHHHHHHHhhhhc
Q psy1915 154 KARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYT--SQFISLVMFALVMCEDRI 214 (361)
Q Consensus 154 k~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t--~~~~~l~~l~~~~~~~~~ 214 (361)
|++|+++|+||++++| |++.||++|.++. ++....++.++. ++++++++|...+...++
T Consensus 106 k~~g~~vi~IT~~~~s-l~~~ad~~l~~~~-~~~~~~~~~s~~~~~~~~~ld~L~~~~~~~~~ 166 (180)
T 1jeo_A 106 KNINNNIIAIVCECGN-VVEFADLTIPLEV-KKSKYLPMGTTFEETALIFLDLVIAEIMKRLN 166 (180)
T ss_dssp HTTCSCEEEEESSCCG-GGGGCSEEEECCC-CCBTTBCTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHCCCcEEEEeCCCCh-HHHhCCEEEEeCC-cccccccchhHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999 9999999999987 444445555664 567888888777765443
No 27
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=99.72 E-value=4.5e-17 Score=152.67 Aligned_cols=152 Identities=20% Similarity=0.202 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceE----EE---
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVM----VE--- 116 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~----~~--- 116 (361)
.++++++++++.+..++... ...++++++|+|+|+.+|.-. +.+++.+ .|.+.. ..
T Consensus 49 ai~~t~~~i~~~i~~i~~~l--------~~a~rI~~~G~G~S~~lA~~~--------a~~~~~~-~g~~~~~~~~l~~~g 111 (306)
T 1nri_A 49 AIESCLPQISLAVEQIVQAF--------QQGGRLIYIGAGTSGRLGVLD--------ASECPPT-FGVSTEMVKGIIAGG 111 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------HTTCCEEEEESHHHHHHHHHH--------HHHHHHH-HCCCTTSEEEEETTC
T ss_pred HHHHHHHHHHHHHHHHHHHH--------HcCCEEEEEeccHhHHHHHHH--------HHhcccc-cCCCHHHHHHHHhcc
Confidence 45555555655555554322 234799999999999887311 1233332 222110 00
Q ss_pred -----ec----cccc------ccCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q psy1915 117 -----LA----SDFL------DRNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHI 181 (361)
Q Consensus 117 -----~~----~e~~------~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 181 (361)
.+ .+.. .....++++|++|+||+||+|++++++++.||++|++||+||++++|||+++||++|.+
T Consensus 112 ~~a~~~a~e~~ed~~~~~~~~l~~~~l~~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~ 191 (306)
T 1nri_A 112 ECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIET 191 (306)
T ss_dssp THHHHSCCTTGGGCTTHHHHHHHHTTCCTTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEEC
T ss_pred hHHHhhhhhcccCcHHHHHHHHHhcCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEc
Confidence 00 1111 11246889999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccc--cchhHHHHHHHHHHHHHHHhhh
Q psy1915 182 NAGPEIGVA--STKAYTSQFISLVMFALVMCED 212 (361)
Q Consensus 182 ~~~~e~~~~--~t~s~t~~~~~l~~l~~~~~~~ 212 (361)
+.++|.... .+++++++++++++|...+...
T Consensus 192 ~~g~E~~~~st~~~s~ta~~~vl~~L~~~~~~~ 224 (306)
T 1nri_A 192 IVGPEILTGSSRLKSGTAQKMVLNMLTTASMIL 224 (306)
T ss_dssp CCCSCSSTTCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccCcccchhHHHHHHHHHHHHHHHHHH
Confidence 888885443 3688999999999888766543
No 28
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=99.70 E-value=5.1e-17 Score=142.76 Aligned_cols=123 Identities=19% Similarity=0.221 Sum_probs=93.2
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHH-----HhcCCceEEEecc---------ccccc-------CCCCCCCC
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLE-----ELTELPVMVELAS---------DFLDR-------NTPVFRDD 132 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~-----~~~g~~~~~~~~~---------e~~~~-------~~~~~~~d 132 (361)
.++++++|+|.|+.+|... .+.+. ...|+++.+..+. ++... ...++++|
T Consensus 45 a~~I~i~G~G~S~~~A~~~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 115 (199)
T 1x92_A 45 EGKILSCGNGGSAGDAQHF---------SSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQPGD 115 (199)
T ss_dssp TCCEEEECSTHHHHHHHHH---------HHHHHTCSSSCCCCCCEEETTCCHHHHHHHHHHTCGGGTTHHHHHHHCCTTC
T ss_pred CCEEEEEcCchhHHHHHHH---------HHHHhcCcccCCCCCceEecCCChhHHHHhhcCccHHHHHHHHHHhCCCCCC
Confidence 4799999999999887533 23331 2367777765422 22111 13478999
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccc---cCeeEEcccCCCcccccchhHHHHHHHHHHHHHHH
Q psy1915 133 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRE---SHCGIHINAGPEIGVASTKAYTSQFISLVMFALVM 209 (361)
Q Consensus 133 lvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~---ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~ 209 (361)
++|+||+||+|++++++++.||++|+++|+||++++|||+++ ||++|.++.+++. ..++++++++++|...+
T Consensus 116 vvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~~~~~~~-----~~~~~~l~i~~~L~~~~ 190 (199)
T 1x92_A 116 VLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVPSKITA-----RIQEVHLLAIHCLCDLI 190 (199)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEECSCSCHH-----HHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEeCCCchH-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 9999999875432 12677777777776554
Q ss_pred h
Q psy1915 210 C 210 (361)
Q Consensus 210 ~ 210 (361)
.
T Consensus 191 ~ 191 (199)
T 1x92_A 191 D 191 (199)
T ss_dssp H
T ss_pred H
Confidence 3
No 29
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=99.66 E-value=5.3e-16 Score=135.82 Aligned_cols=121 Identities=19% Similarity=0.180 Sum_probs=91.3
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHH-----hcCCceEEEecc---------ccccc-------CCCCCCCC
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEE-----LTELPVMVELAS---------DFLDR-------NTPVFRDD 132 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~-----~~g~~~~~~~~~---------e~~~~-------~~~~~~~d 132 (361)
.++++++|+|.|+.+|... .+.+.+ ..|+++....+. +..+. ...++++|
T Consensus 41 a~~I~i~G~G~S~~~A~~~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~~d~~~~~~~~~~~~~~~~~~D 111 (196)
T 2yva_A 41 GNKILCCGNGTSAANAQHF---------AASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGD 111 (196)
T ss_dssp TCCEEEEESTHHHHHHHHH---------HHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTSTTGGGHHHHHHHHHCCTTC
T ss_pred CCEEEEEeCchhhHHHHHH---------HHHHhccccccCCCCceEeecCchHHHHHHhcCCCHHHHHHHHHHhcCCCCC
Confidence 4789999999999887533 232321 367777765421 22111 13478999
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccc---cCeeEEcccCCCcccccchhHH--HHHHHHHHHHH
Q psy1915 133 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRE---SHCGIHINAGPEIGVASTKAYT--SQFISLVMFAL 207 (361)
Q Consensus 133 lvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~---ad~~l~~~~~~e~~~~~t~s~t--~~~~~l~~l~~ 207 (361)
++|+||+||+|++++++++.||++|+++|+||++++||++++ ||++|.++.+. .+++ +++.++++|..
T Consensus 112 vvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~~~~~-------~~~~~~~~l~~~~~L~~ 184 (196)
T 2yva_A 112 VLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHR-------SARIQEMHMLTVNCLCD 184 (196)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEECSCSC-------HHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEeCCCC-------hhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 99999987632 2334 77777777665
Q ss_pred HHh
Q psy1915 208 VMC 210 (361)
Q Consensus 208 ~~~ 210 (361)
.+.
T Consensus 185 ~~~ 187 (196)
T 2yva_A 185 LID 187 (196)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 30
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=99.63 E-value=1.2e-15 Score=134.49 Aligned_cols=127 Identities=14% Similarity=0.196 Sum_probs=89.9
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEe-ccc--------ccc-------cCCCCCCCCEEEEE
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVEL-ASD--------FLD-------RNTPVFRDDVCFFI 137 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~-~~e--------~~~-------~~~~~~~~dlvI~i 137 (361)
.++++++|.|.|+.+|++...+|.. . +...+.|+++.+.. +.. +.+ ....++++|++|+|
T Consensus 46 ~~~I~i~G~G~S~~~A~~~~~~l~~---~-~~~~r~g~~~~~~~~d~~~~~a~~~d~~~~~~~~~~l~~~~~~~Dvvi~i 121 (201)
T 3trj_A 46 GGKVLVCGNGSSGVIAQHFTSKLLN---H-FEMERPPLPAIALTGDVATITAVGNHYGFSQIFAKQVAALGNEDDILLVI 121 (201)
T ss_dssp TCCEEEEESTHHHHHHHHHHHHHHC-----------CCCEEETTSCHHHHHHHHHHTCGGGTTHHHHHHHCCTTCEEEEE
T ss_pred CCEEEEEeCcHhHHHHHHHHHHhcC---c-cCCCCCCCceEEccCChHHHHHhccCCCHHHHHHHHHHhhCCCCCEEEEE
Confidence 4799999999999998765433321 0 01113688877654 211 100 01236899999999
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCcccccc---CeeEEcccCCCcccccchhHHHHHHHHHHHHHHH
Q psy1915 138 SQSGETADSLMALRYCKARGALIVGVTNTVGSSISRES---HCGIHINAGPEIGVASTKAYTSQFISLVMFALVM 209 (361)
Q Consensus 138 S~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~a---d~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~ 209 (361)
|+||+|++++++++.||++|+++|+||++++|||+++| |+.|.++.... . .....++.++++|...+
T Consensus 122 S~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~~~~~~~-~----~~~~~~l~i~~~l~~~v 191 (201)
T 3trj_A 122 TTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELRVPSDNI-A----NIQENHFLIVHCLCDII 191 (201)
T ss_dssp CSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEEESCCCH-H----HHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEEeCCCCc-h----HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999876321 1 23455666666654433
No 31
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=99.63 E-value=4.4e-16 Score=138.29 Aligned_cols=110 Identities=17% Similarity=0.107 Sum_probs=83.9
Q ss_pred ccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEeccc-c-------cc-------cCCCCCCCCEEEEE
Q psy1915 73 RRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASD-F-------LD-------RNTPVFRDDVCFFI 137 (361)
Q Consensus 73 ~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e-~-------~~-------~~~~~~~~dlvI~i 137 (361)
..++++++|+|.|+.+|...+..+. .++.+. ..|+++.+..+.. + .+ ....++++|++|+|
T Consensus 63 ~~~~I~i~G~G~S~~~A~~~a~~l~---~~~~~~-~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvvI~i 138 (212)
T 2i2w_A 63 AGGKVLSCGNGGSHCDAMHFAEELT---GRYREN-RPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGI 138 (212)
T ss_dssp TTCCEEEEESTHHHHHHHHHHHHHH---HHHCTT-SSSCSEEECCCTTCGGGGSCCCSCSSHHHHHHHHHCCTTCEEEEE
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHH---hhhccc-CCCCeEEecCChHHhhHhhccCCHHHHHHHHHHhcCCCCCEEEEE
Confidence 3479999999999988754332221 012222 3678877765221 1 00 01247899999999
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCCC
Q psy1915 138 SQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPE 186 (361)
Q Consensus 138 S~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e 186 (361)
|+||+|++++++++.||++|+++|+||++++|||+++||++|.++.|+|
T Consensus 139 S~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~~~~g~e 187 (212)
T 2i2w_A 139 STSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGY 187 (212)
T ss_dssp CSSSCCHHHHHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEEECCCSC
T ss_pred ECCCCCHHHHHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEEcCCCCc
Confidence 9999999999999999999999999999999999999999999987655
No 32
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=99.60 E-value=2.8e-15 Score=131.29 Aligned_cols=123 Identities=19% Similarity=0.191 Sum_probs=90.5
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHH----HhcCCceEEEe-ccc--------ccc-------cCCCCCCCCE
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLE----ELTELPVMVEL-ASD--------FLD-------RNTPVFRDDV 133 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~----~~~g~~~~~~~-~~e--------~~~-------~~~~~~~~dl 133 (361)
.++++++|+|.|+.+|.... ..+.. ...|+++.... +.. +.+ ....++++|+
T Consensus 48 ~~~I~i~G~G~S~~~A~~~~--------~~l~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 119 (198)
T 2xbl_A 48 GGKVLLAGNGGSAADAQHIA--------GEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDV 119 (198)
T ss_dssp TCCEEEECSTHHHHHHHHHH--------HHHHSCSSSCCCCCCEEETTCCHHHHHHHHHHHCGGGTTHHHHHHHCCTTCE
T ss_pred CCEEEEEeCcHhhHHHHHHH--------HHHHhhhccCCCCCceEEecCChHHHHHhhccCCHHHHHHHHHHhhCCCCCE
Confidence 47999999999998875322 11211 12567776653 221 100 1123689999
Q ss_pred EEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHH
Q psy1915 134 CFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVM 209 (361)
Q Consensus 134 vI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~ 209 (361)
+|+||+||+|++++++++.||++|+++|+||++++|||+++||++|.++.+.+. ..+.+++.++++|...+
T Consensus 120 vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~~~~~~~~-----~~~~~~l~i~~~L~~~~ 190 (198)
T 2xbl_A 120 LIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSADTP-----KIQEGHLVLGHIVCGLV 190 (198)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEECSCSSHH-----HHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEEeCCCcHH-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875432 24667777766665443
No 33
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=99.59 E-value=4.2e-15 Score=134.71 Aligned_cols=84 Identities=15% Similarity=0.094 Sum_probs=69.3
Q ss_pred CCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCC-----------ccccccCeeEEcccCC-Cc------
Q psy1915 126 TPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGS-----------SISRESHCGIHINAGP-EI------ 187 (361)
Q Consensus 126 ~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S-----------~la~~ad~~l~~~~~~-e~------ 187 (361)
..++++|++|+||+||+|++++++++.||++|+++|+||++++| ||+++||++|.++.++ |.
T Consensus 104 ~~~~~~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~~~~~~~e~~~~~~~ 183 (243)
T 3cvj_A 104 HQVTNKDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLDNGAPVGDAGFQIAN 183 (243)
T ss_dssp TTCCTTCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEECCCCTTSCCEECSS
T ss_pred hcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEECCCCcccceeeccC
Confidence 45789999999999999999999999999999999999999877 9999999999887654 32
Q ss_pred ---ccccchhHHHHHHHHHHHHHHHh
Q psy1915 188 ---GVASTKAYTSQFISLVMFALVMC 210 (361)
Q Consensus 188 ---~~~~t~s~t~~~~~l~~l~~~~~ 210 (361)
..+.+. .+++++++++|...+.
T Consensus 184 ~~~~~~~~s-~~~~~~il~~L~~~~~ 208 (243)
T 3cvj_A 184 SEIYSGATS-DSIGCFLAQALIVETL 208 (243)
T ss_dssp SSCEECCCH-HHHHHHHHHHHHHHHH
T ss_pred ccccCCcHH-HHHHHHHHHHHHHHHH
Confidence 234443 4778887777665443
No 34
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=99.57 E-value=1e-14 Score=126.64 Aligned_cols=108 Identities=21% Similarity=0.219 Sum_probs=80.1
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEe-ccc--------------cc-ccCCCCCCCCEEEEE
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVEL-ASD--------------FL-DRNTPVFRDDVCFFI 137 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~-~~e--------------~~-~~~~~~~~~dlvI~i 137 (361)
.++++++|+|+|+.+|......+.. ++.+ ...|+++.... +.. +. ......+++|++|++
T Consensus 42 ~~~I~i~G~G~S~~~a~~~~~~l~~---~~~~-~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvi~i 117 (188)
T 1tk9_A 42 GGKILICGNGGSAADAQHFAAELSG---RYKK-ERKALAGIALTTDTSALSAIGNDYGFEFVFSRQVEALGNEKDVLIGI 117 (188)
T ss_dssp TCCEEEEESTHHHHHHHHHHHHHHS---CSSS-CCCCCCEEESSCCHHHHHHHHHHTCGGGHHHHHHHHHCCTTCEEEEE
T ss_pred CCEEEEEeCcHhHHHHHHHHHHHhh---hhcc-CCCCCceEeccCCchhHhhhhcCCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 4789999999999877533211100 0011 12567776654 221 00 012347899999999
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCC
Q psy1915 138 SQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGP 185 (361)
Q Consensus 138 S~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~ 185 (361)
|+||+|++++++++.||++|+++|+||++++|||+++||++|.++.++
T Consensus 118 S~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~~~~~~ 165 (188)
T 1tk9_A 118 STSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVPSDD 165 (188)
T ss_dssp CSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEEESCSC
T ss_pred eCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEEeCCCC
Confidence 999999999999999999999999999999999999999999987653
No 35
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=99.47 E-value=3.1e-13 Score=118.70 Aligned_cols=117 Identities=12% Similarity=0.129 Sum_probs=107.3
Q ss_pred cHHHHHHHHHHhcCC-eEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHH
Q psy1915 241 DSEVQQLAKEMYEQK-SMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKC 319 (361)
Q Consensus 241 ~~~~~~~a~~l~~~~-~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~ 319 (361)
.+.++++++.+.+++ +++++|.|.++.+|++++.+|.+. +.++..+...++.|++...+++++++|+++.+|++. ++
T Consensus 31 ~~~i~~~~~~i~~a~~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~-~~ 108 (201)
T 3fxa_A 31 EEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCI-ERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTG-EL 108 (201)
T ss_dssp HHHHHHHHHHHHHCSSCEEEECCTHHHHHHHHHHHHHHHT-TCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCH-HH
T ss_pred HHHHHHHHHHHHhcCCcEEEEEecHHHHHHHHHHHHHHhc-CCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCH-HH
Confidence 356888999999995 999999999999999999999996 789999988999999988899999999999999986 78
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 320 MNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 320 ~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
+++++.++++|+++|+||+.+++++.+.+|+++.+|...+
T Consensus 109 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~e 148 (201)
T 3fxa_A 109 LNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKE 148 (201)
T ss_dssp HTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCCSCC
T ss_pred HHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEcCCCcc
Confidence 8999999999999999999999999999999999997644
No 36
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=99.45 E-value=7.9e-13 Score=117.92 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=107.4
Q ss_pred cHHHHHHHHHHhc-----CCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCcc
Q psy1915 241 DSEVQQLAKEMYE-----QKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPV 315 (361)
Q Consensus 241 ~~~~~~~a~~l~~-----~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~ 315 (361)
.+.++++++.+.+ +++++++|.|.++.+|.+++.+|.+. +.++..+...++.|++...+++++++|+++.+|++
T Consensus 41 ~~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~A~~~~~~l~~l-g~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t 119 (220)
T 3etn_A 41 TDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTFCST-GIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKT 119 (220)
T ss_dssp CTHHHHHHHHHHHHTTTTCCCEEEECSHHHHHHHHHHHHHHHHT-TCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCC
T ss_pred HHHHHHHHHHHHhHhhccCCEEEEEEecHHHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCC
Confidence 4578888888888 89999999999999999999999986 56999999999999998889999999999999998
Q ss_pred HHHHHHHHHHHHH--cCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 316 YVKCMNALLQVIA--RDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 316 ~~~~~~~~~~~~~--~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
. +++++++.+++ +|+++|+||+.+++++.+.+|+++.+|...+
T Consensus 120 ~-~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~~~~~e 164 (220)
T 3etn_A 120 R-EIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAE 164 (220)
T ss_dssp H-HHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEECCCCCC
T ss_pred H-HHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEcCCCcc
Confidence 6 79999999999 9999999999999999999999999987654
No 37
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=99.40 E-value=3.1e-12 Score=121.11 Aligned_cols=136 Identities=10% Similarity=0.043 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHc-ccHHHHHHHHHH--hcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCc
Q psy1915 224 IKGLKVIHEQIREVLQ-MDSEVQQLAKEM--YEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALI 300 (361)
Q Consensus 224 ~~~l~~l~~~~~~~l~-~~~~~~~~a~~l--~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i 300 (361)
.+++.+-|+.+++.+. ..+.++++++.+ .+.++++++|+|.++.+|+.++.++.+..++++......++.+.....+
T Consensus 9 ~kEI~eqP~~~~~~l~~~~~~~~~~~~~i~~~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~v~~~~~~~~~~~~~~~~ 88 (334)
T 3hba_A 9 EQEARTAPQKIAEQLLANDAITESLGSVLREFKPKFVMIVGRGSSDHAGVFAKYLFEIEASIPTFAAAPSVASVYGKTLK 88 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEESSGGGCHHHHHHHHHHHHHHCCCEEECCHHHHHTSCCCCC
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEEcchHHHHhcccCC
Confidence 3445566777776665 234466677666 6789999999999999999999999998899988765444433333456
Q ss_pred cCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCCC
Q psy1915 301 DNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDC 360 (361)
Q Consensus 301 ~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~~ 360 (361)
++++++|+++.+|++. +++++++.++++|.++++||+.+++++++.+|.++.+|.++|.
T Consensus 89 ~~~dl~i~iS~SG~T~-e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~g~E~ 147 (334)
T 3hba_A 89 LAGGLVIVISQSGRSP-DILAQARMAKNAGAFCVALVNDETAPIKDIVDVVIPLRAGEEK 147 (334)
T ss_dssp CTTCEEEEEESSSCCH-HHHHHHHHHHHTTCEEEEEESCTTSGGGGTSSEEEECCCCCCC
T ss_pred CCCCEEEEEeCCCCCH-HHHHHHHHHHHcCCcEEEEeCCCCChHHHhcCEeeeecCCCcc
Confidence 8899999999999996 7999999999999999999999999999999999999987764
No 38
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=99.39 E-value=3.8e-12 Score=121.02 Aligned_cols=136 Identities=8% Similarity=0.062 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHc-ccHHHHHHHHHH--hcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCc
Q psy1915 224 IKGLKVIHEQIREVLQ-MDSEVQQLAKEM--YEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALI 300 (361)
Q Consensus 224 ~~~l~~l~~~~~~~l~-~~~~~~~~a~~l--~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i 300 (361)
.+++.+-|+.+++.+. ..+.++++++.+ .+.++++++|+|.++.+|..++.+++...++++......+..|.....+
T Consensus 10 ~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~~~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 89 (344)
T 3fj1_A 10 RREIDEIPEAVQRLLDHGAQDVARVAAVLRLRDPSFVATVARGSSDHVCTYLSYAAELLLGLPVASLGPSVASVYDARLR 89 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEECCTHHHHHHHHHHHHHHHHHCCCEEECCTHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEecchHHhhhcccCC
Confidence 3445556666666664 223456666666 6789999999999999999999999998899988764444434333457
Q ss_pred cCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCCC
Q psy1915 301 DNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDC 360 (361)
Q Consensus 301 ~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~~ 360 (361)
++++++|+++.+|++. +++++++.++++|.++|+||+.+++++++.+|.++.+|.++|.
T Consensus 90 ~~~dlvI~iS~SG~T~-e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E~ 148 (344)
T 3fj1_A 90 LDRALCLAVSQSGKSP-DIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTIDIHAGPEL 148 (344)
T ss_dssp CTTEEEEEEESSSCCH-HHHHHHHHHHHTTCEEEEEESCTTSHHHHTSSEEEECCCCCCC
T ss_pred CCCcEEEEEcCCCCCH-HHHHHHHHHHHCCCcEEEEECCCCChHHHhcCEeeecCCCCcc
Confidence 8999999999999996 7999999999999999999999999999999999999987664
No 39
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=99.36 E-value=7.6e-12 Score=108.31 Aligned_cols=116 Identities=10% Similarity=0.115 Sum_probs=101.4
Q ss_pred cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEe-cCCccccCccCccCCCcEEEEEcCCccHHHH
Q psy1915 241 DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIM-AGELKHGPLALIDNSMPVIMILTRDPVYVKC 319 (361)
Q Consensus 241 ~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~-~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~ 319 (361)
.+.++++++.+.++++++++|.|.++.+|.+++.+|.. .+.++..+. ..+..+.....+++++++|+++.+|++. ++
T Consensus 26 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~-~~ 103 (187)
T 3sho_A 26 PEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNS-LGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLR-DT 103 (187)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHH-TTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCH-HH
T ss_pred HHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHh-cCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCH-HH
Confidence 45688899999999999999999999999999999987 477888877 3444455556678999999999999986 78
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCC
Q psy1915 320 MNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTV 358 (361)
Q Consensus 320 ~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~ 358 (361)
+++++.++++|.++|+||+.+++++.+.+|.++.+|...
T Consensus 104 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~ 142 (187)
T 3sho_A 104 VAALAGAAERGVPTMALTDSSVSPPARIADHVLVAATRG 142 (187)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEECCCCC
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEecCCC
Confidence 999999999999999999999999999999999998754
No 40
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=99.36 E-value=1e-11 Score=107.43 Aligned_cols=112 Identities=12% Similarity=0.135 Sum_probs=97.1
Q ss_pred cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHH
Q psy1915 241 DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCM 320 (361)
Q Consensus 241 ~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~ 320 (361)
.+.++++++.+.++++++++|.|.++.+|++++.+|.+.. .++..+. +. | ...+++++++|+++.+|++. +++
T Consensus 24 ~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g-~~~~~~~--~~-~--~~~~~~~d~vI~iS~sG~t~-~~~ 96 (186)
T 1m3s_A 24 NEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMG-FNAHIVG--EI-L--TPPLAEGDLVIIGSGSGETK-SLI 96 (186)
T ss_dssp HHHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTT-CCEEETT--ST-T--CCCCCTTCEEEEECSSSCCH-HHH
T ss_pred HHHHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhcC-CeEEEeC--cc-c--ccCCCCCCEEEEEcCCCCcH-HHH
Confidence 3568889999999999999999999999999999999864 5766653 33 3 34578999999999999986 789
Q ss_pred HHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 321 NALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 321 ~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
++++.++++|+++|+||+.+++++.+.+|.++.+|...+
T Consensus 97 ~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~~ 135 (186)
T 1m3s_A 97 HTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGSPK 135 (186)
T ss_dssp HHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEECSCCSC
T ss_pred HHHHHHHHCCCEEEEEECCCCCchHHhCCEEEEeCCccc
Confidence 999999999999999999999999999999999997654
No 41
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=99.35 E-value=7.1e-12 Score=108.12 Aligned_cols=128 Identities=18% Similarity=0.129 Sum_probs=108.2
Q ss_pred HHHHHHHHHHc-ccHHHHHHHHHHhcCC-eEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcE
Q psy1915 229 VIHEQIREVLQ-MDSEVQQLAKEMYEQK-SMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPV 306 (361)
Q Consensus 229 ~l~~~~~~~l~-~~~~~~~~a~~l~~~~-~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~v 306 (361)
..++.++...+ .++.++++++.+.+++ +++++|.|.++.+|.+++.++... +.++..+...++.|.....+++++++
T Consensus 22 ~~~~~l~~t~~~~~~~i~~~~~~i~~a~~~I~i~G~G~S~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~d~v 100 (183)
T 2xhz_A 22 IERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFAST-GTPSFFVHPGEAAHGDLGMVTPQDVV 100 (183)
T ss_dssp HHHHHHTTGGGTSSHHHHHHHHHHHTCSSCEEEEECHHHHHHHHHHHHHHHTT-TCCEEECCTTHHHHHTSTTCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecHHHHHHHHHHHHHHhc-CceEEEeCchHHhhhhhccCCCCCEE
Confidence 33444444444 2347888999999887 999999999999999999999875 56888787778878777778899999
Q ss_pred EEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCC
Q psy1915 307 IMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTV 358 (361)
Q Consensus 307 i~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~ 358 (361)
|+++.+|++. +++++++.++++|.++|+||+.+++++.+.+|+++.+|...
T Consensus 101 I~iS~sG~t~-~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~~~~ 151 (183)
T 2xhz_A 101 IAISNSGESS-EITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAK 151 (183)
T ss_dssp EEECSSSCCH-HHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECCCSC
T ss_pred EEEeCCCCCH-HHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeCCCc
Confidence 9999999986 78999999999999999999999999999999999999654
No 42
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=99.34 E-value=3.8e-12 Score=120.32 Aligned_cols=121 Identities=12% Similarity=0.085 Sum_probs=110.3
Q ss_pred cccHHHHHHHHHHh--cCCeEEEEeccCCHHHHHHHHHHHHHhh-CcceEEEecCCccccCccCccCCCcEEEEEcCCcc
Q psy1915 239 QMDSEVQQLAKEMY--EQKSMLLMGRGYNYATCMEGALKIKELT-YMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPV 315 (361)
Q Consensus 239 ~~~~~~~~~a~~l~--~~~~i~~iG~G~~~~~A~e~alkl~E~~-~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~ 315 (361)
+..++++++++.+. +.++++++|+|.++.+|+.++.+|.... ++++..+...||.+.+...+++++++|+++.+|++
T Consensus 8 ~~~~~i~~~v~~i~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~T 87 (329)
T 3eua_A 8 KVNREVQAFLQDLKGKTIDHVFFVACGGSSAIMYPSKYVFDRESKSINSDLYSANEFIQRNPVQLGEKSLVILCSHSGNT 87 (329)
T ss_dssp GSCHHHHHHHHHHTTCCCCEEEEEECTHHHHTTHHHHHHHHHHCSSCEEEEEEHHHHHHHCCTTCSTTEEEEEEESSSCC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEccHHHHHHHHHHHHHHHhcCCCeEEEEccHHHHhcCccCCCCCcEEEEEcCCCCC
Confidence 34567888888888 7899999999999999999999999987 99999999999999876667899999999999999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCCC
Q psy1915 316 YVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDC 360 (361)
Q Consensus 316 ~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~~ 360 (361)
. +++++++.++++|.++++||+.+++++++.+|+++.+|...|.
T Consensus 88 ~-e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~e~ 131 (329)
T 3eua_A 88 P-ETVKAAAFARGKGALTIAMTFKPESPLAQEAQYVAQYDWGDEA 131 (329)
T ss_dssp H-HHHHHHHHHHHTTCEEEEEESCTTSHHHHHSSEEEECCCSTTC
T ss_pred H-HHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEEeCCCCcc
Confidence 6 7999999999999999999999999999999999999987764
No 43
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=99.29 E-value=2.3e-11 Score=116.12 Aligned_cols=117 Identities=21% Similarity=0.172 Sum_probs=105.4
Q ss_pred cHHHHHHHHHHhc--CCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHH
Q psy1915 241 DSEVQQLAKEMYE--QKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVK 318 (361)
Q Consensus 241 ~~~~~~~a~~l~~--~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~ 318 (361)
.+.++++++.+.+ .++++++|+|.++.+|+.++.+++...++++..+...|+.+.+...+++++++|+++.+|++. +
T Consensus 39 ~~~i~~~~~~i~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~t~-e 117 (355)
T 2a3n_A 39 RQKAEQVADEIYQAGFSSLFFASVGGSLAPMMAINEFAKELTTLPVYVEQAAELIHKGNKRLNKDSVVITLSKSGDTK-E 117 (355)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEECGGGHHHHHHHHHHHHHHCCSCEEEEEHHHHHHHCCTTCCTTCEEEEECSSSCCH-H
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEccHHHHHHHHHHHHHHhhcCCeEEEcCcHHHHhhchhcCCCCCEEEEEeCCCCCH-H
Confidence 3567788888887 899999999999999999999999888899999999999887766678999999999999996 7
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCC
Q psy1915 319 CMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTV 358 (361)
Q Consensus 319 ~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~ 358 (361)
++++++.++++|.++|+||+..++++++.+|.++.+|...
T Consensus 118 ~~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l~~~~~~ 157 (355)
T 2a3n_A 118 SVAIAEWCKAQGIRVVAITKNADSPLAQAATWHIPMRHKN 157 (355)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEEECCCSS
T ss_pred HHHHHHHHHHCCCeEEEEECCCCChhhHhCCEEEEeCCCc
Confidence 8999999999999999999999999999999999998654
No 44
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=99.29 E-value=1.8e-11 Score=117.21 Aligned_cols=134 Identities=13% Similarity=0.096 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHcc-c-HHHHHHHH-HHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCc
Q psy1915 224 IKGLKVIHEQIREVLQM-D-SEVQQLAK-EMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALI 300 (361)
Q Consensus 224 ~~~l~~l~~~~~~~l~~-~-~~~~~~a~-~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i 300 (361)
.+++.+-|+.+++.+.. . +..+.+.. .+.+.++++++|+|.++.+|..++..++...++++..+...||.+.+.. +
T Consensus 17 ~kEI~eqP~~l~~~l~~~~~~~~~~~~~~~~~~a~~I~i~G~GtS~~aa~~~~~~~~~~~g~~~~~~~~se~~~~~~~-~ 95 (366)
T 3knz_A 17 FQGMNETPLRLLEMLTQTREDLWRAAQALTERGVTRIILTGSGTSYHGALTARTFMQRWCALPVDVCWPFMLDDETLA-R 95 (366)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHHHTSCEEEECGGGCCHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCEEEEEEechHHHHHHHHHHHHHHHHCCCeEEEcchHHHhhccC-C
Confidence 44567778888888864 3 23444432 4567899999999999999999999999988999999999999886544 5
Q ss_pred cCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 301 DNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 301 ~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
++++++|+++.+|++. +++++++.++++|.++|+||+.+++++++.+|.++.+|...|
T Consensus 96 ~~~dlvI~iS~SGeT~-e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD~~l~~~~g~E 153 (366)
T 3knz_A 96 SGKALVVGISQGGGSL-STLAAMERARNVGHITASMAGVAPATIDRAADYILTVPCGEE 153 (366)
T ss_dssp SCSEEEEEEESSSCCH-HHHHHHHHHHHTTCEEEEEESSSSCGGGGGCSEECCCCCCC-
T ss_pred CCCCEEEEEcCCCCCH-HHHHHHHHHHHcCCCEEEEECCCCChhhhhcCEEEecCCCcc
Confidence 8999999999999996 799999999999999999999999999999999999987655
No 45
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=99.29 E-value=1.1e-11 Score=117.83 Aligned_cols=115 Identities=11% Similarity=0.124 Sum_probs=105.4
Q ss_pred HHHHHHHHHHh---cCCeEEEEeccCCHHHHHHHHHHHHHhh-CcceEEEecCCccccCccCccCCCcEEEEEcCCccHH
Q psy1915 242 SEVQQLAKEMY---EQKSMLLMGRGYNYATCMEGALKIKELT-YMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYV 317 (361)
Q Consensus 242 ~~~~~~a~~l~---~~~~i~~iG~G~~~~~A~e~alkl~E~~-~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~ 317 (361)
+.++++++.+. +.++++++|+|.++.+|+.++.+++... ++++..+...||.+.+...+++++++|+++.+|++.
T Consensus 25 ~~i~~~~~~i~~~~~a~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~T~- 103 (347)
T 3fkj_A 25 ENARRIISDILGKQNIERVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYITSNEFVHATPKALGKNSVVILASQQGNTA- 103 (347)
T ss_dssp HHHHHHHHHHHTTSCCCEEEEEESTHHHHTTHHHHHHHHHHCSSCEEEEEEHHHHHHSCCTTCSTTEEEEEEESSSCCH-
T ss_pred HHHHHHHHHHHhhCCCCEEEEEEehHHHHHHHHHHHHHHHHhCCCeEEEeCcHHHHhhCcCCCCCCCEEEEEeCCCCcH-
Confidence 44667777777 7899999999999999999999999887 999999999999998766688999999999999996
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCC
Q psy1915 318 KCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHT 357 (361)
Q Consensus 318 ~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~ 357 (361)
+++++++.++++|.++|+||+.+++++++.+|.++.+|..
T Consensus 104 e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g 143 (347)
T 3fkj_A 104 ETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQWA 143 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSTTCHHHHTCSEEEECBCC
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCCChHHhhcCeEEEeccC
Confidence 7999999999999999999999999999999999999987
No 46
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=99.28 E-value=1.4e-11 Score=117.50 Aligned_cols=134 Identities=10% Similarity=0.117 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHcccH-HHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccC
Q psy1915 224 IKGLKVIHEQIREVLQMDS-EVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDN 302 (361)
Q Consensus 224 ~~~l~~l~~~~~~~l~~~~-~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~ 302 (361)
.+++.+-|+.+++.+.... ..+++ ...+.++++++|+|.++.+|..++.+++...++++..+...||.|......++
T Consensus 5 ~keI~eqP~~~~~~l~~~~~~~~~~--~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~~se~~~~~~~~~~~ 82 (352)
T 3g68_A 5 QDYMLETPVRMREIISNADSLFNEV--KRTNLKKIIITGSGTSYHSGVQVQPYLQNLLDIDVVKMYPFMITEDTFKFDNE 82 (352)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHTTTG--GGSCCSEEEEECSHHHHHHHHHHHHHHHHHCSSEEEEECGGGCCGGGGSSCCT
T ss_pred HHHHHHHHHHHHHHHHhhHHhhhHh--hhcCCCEEEEEEeehHHHHHHHHHHHHHHHhCCcEEEEcchhhhhcccCCCCC
Confidence 3445566777776664211 11111 13467999999999999999999999999999999999999998865543348
Q ss_pred CCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCCC
Q psy1915 303 SMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVDC 360 (361)
Q Consensus 303 ~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~~ 360 (361)
++++|+++.+|++. +++++++.++++|.++|+||+.+++++++.+|.++.++...|.
T Consensus 83 ~dlvI~iS~SG~T~-e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD~~l~~~~g~E~ 139 (352)
T 3g68_A 83 NTLVVGVSQGGSSY-STYNAMKLAEDKGCKIASMAGCKNALIDEISDYILTVNCGEEK 139 (352)
T ss_dssp TEEEEEEESSSCCH-HHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECCCCCCCCC
T ss_pred CcEEEEEeCCCCCH-HHHHHHHHHHHCCCCEEEEeCCCCChHHHhCCEEEEeCCCCCc
Confidence 99999999999996 7999999999999999999999999999999999999876653
No 47
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=99.28 E-value=1.3e-11 Score=109.21 Aligned_cols=112 Identities=16% Similarity=0.096 Sum_probs=88.8
Q ss_pred HHHHHHHhcCCeEEEEeccCCHHHHHHHH------HHHHHhhCcceEEEe-cCCc-------------cccCccCccCCC
Q psy1915 245 QQLAKEMYEQKSMLLMGRGYNYATCMEGA------LKIKELTYMHSEGIM-AGEL-------------KHGPLALIDNSM 304 (361)
Q Consensus 245 ~~~a~~l~~~~~i~~iG~G~~~~~A~e~a------lkl~E~~~~~a~~~~-~~E~-------------~Hgp~~~i~~~~ 304 (361)
+.+++.+.+.++++++|+|.++.+|..++ +++.+. .+++..+. ...+ .|.....+++++
T Consensus 55 ~~i~~~l~~~~~I~i~G~G~S~~~A~~~a~~l~~~~~~~~~-g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 133 (212)
T 2i2w_A 55 VLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRP-GYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGD 133 (212)
T ss_dssp HHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHHHHCTTSS-SCSEEECCCTTCGGGGSCCCSCSSHHHHHHHHHCCTTC
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHhhhcccCC-CCeEEecCChHHhhHhhccCCHHHHHHHHHHhcCCCCC
Confidence 34445578889999999999999999888 444443 56777665 2221 122223468899
Q ss_pred cEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCC
Q psy1915 305 PVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTV 358 (361)
Q Consensus 305 ~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~ 358 (361)
++|+++.+|++. .++++++.++++|+++|+||+.+++++.+.+|.+|.+|.++
T Consensus 134 vvI~iS~SG~t~-~~i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~~~~g~ 186 (212)
T 2i2w_A 134 VLLGISTSGNSA-NVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFG 186 (212)
T ss_dssp EEEEECSSSCCH-HHHHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEEECCCS
T ss_pred EEEEEECCCCCH-HHHHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEEcCCCC
Confidence 999999999985 78999999999999999999999999999999999999743
No 48
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.28 E-value=1.9e-11 Score=124.80 Aligned_cols=109 Identities=10% Similarity=0.103 Sum_probs=98.1
Q ss_pred HHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHH
Q psy1915 249 KEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIA 328 (361)
Q Consensus 249 ~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~ 328 (361)
+.+.+.++++++|+|.++.+|+.++..+....++++......|+.|+.. .+++++++|+++.+|++. +++++++.+++
T Consensus 287 ~~i~~~~~I~i~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~T~-e~l~a~~~ak~ 364 (608)
T 2bpl_A 287 ELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKS-AVRRNSLMITLSQSGETA-DTLAGLRLSKE 364 (608)
T ss_dssp HHHHHCCEEEEEECHHHHHHHHHHHHHHHHHSCCCEEEEEHHHHTTSCC-CCCTTEEEEEEESSSCCH-HHHHHHHHHHH
T ss_pred hHhcCCCEEEEEEehHHHHHHHHHHHHHHHHhCCCEEEEehhHhhccCC-CCCCCCEEEEEeCCcCCH-HHHHHHHHHHH
Confidence 4566789999999999999999999888888899999999999988764 578999999999999996 79999999999
Q ss_pred cC-CcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 329 RD-GRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 329 ~g-~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
+| .++|+||+..++++++.+|.++.+|...|
T Consensus 365 ~G~a~~IaIT~~~~S~La~~ad~~l~~~~~~E 396 (608)
T 2bpl_A 365 LGYLGSLAICNVPGSSLVRESDLALMTNAGTE 396 (608)
T ss_dssp TTCSEEEEEESSTTCHHHHHSSEEEECCCCCC
T ss_pred cCCCeEEEEECCCCCHHHHhcCEEEEecCCce
Confidence 99 99999999999999999999999987554
No 49
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.24 E-value=3.2e-11 Score=115.94 Aligned_cols=132 Identities=15% Similarity=0.089 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHcc-cHHHHHHHHHHhc-CCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCC
Q psy1915 226 GLKVIHEQIREVLQM-DSEVQQLAKEMYE-QKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNS 303 (361)
Q Consensus 226 ~l~~l~~~~~~~l~~-~~~~~~~a~~l~~-~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~ 303 (361)
++.+-|+.+++++.. .+.++++++.+.+ .++++++|+|.++.+|+.++.++....++++......|+.+.. ..++++
T Consensus 20 EI~eqp~~~~~~~~~~~~~l~~~~~~i~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~~~~~~~~~~~~-~~~~~~ 98 (373)
T 2aml_A 20 YINEEEEMCRVILADFQTNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENLADVRITIEEPFNHLYYE-KLSSHL 98 (373)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHTTCTTCCCEEEEEECHHHHHHHHHHHHHHHHHSSCEEEEECHHHHHHHC-CCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEEEEEEecHHHHHHHHHHHHHHHHhCCcEEEECchhHHHhc-cCCCCC
Confidence 444456666666652 2345666666554 6899999999999999999999999888999988887887653 237889
Q ss_pred CcEEEEEcCCccHHHHHHHHHHHHHc-CCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 304 MPVIMILTRDPVYVKCMNALLQVIAR-DGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 304 ~~vi~i~~~g~~~~~~~~~~~~~~~~-g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
+++|+++.+|++. +++++++.++++ |.++|+||+.+++++++.+|.++.+|...|
T Consensus 99 dlvI~iS~SG~T~-e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad~~l~~~~~~E 154 (373)
T 2aml_A 99 DLVIGISQSGQST-STISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKE 154 (373)
T ss_dssp CEEEEECSSSCBH-HHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCSEEEECSCCCC
T ss_pred CEEEEEcCCCCCH-HHHHHHHHHHHhCCCcEEEEECCCCChHHHhcCcceecCCCcc
Confidence 9999999999996 799999999999 999999999999999999999999997665
No 50
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=99.23 E-value=1.4e-10 Score=99.74 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=92.8
Q ss_pred HHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHHH
Q psy1915 242 SEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMN 321 (361)
Q Consensus 242 ~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~~ 321 (361)
+.++++++.+.++++++++|.|.++.+|.+++.+|.+. +.++..+. ++ | ...+++++++|+++.+|++. ++++
T Consensus 28 ~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~~--~~-~--~~~~~~~d~vi~iS~sG~t~-~~~~ 100 (180)
T 1jeo_A 28 NKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHL-GFKSYFVG--ET-T--TPSYEKDDLLILISGSGRTE-SVLT 100 (180)
T ss_dssp HHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHT-TCCEEETT--ST-T--CCCCCTTCEEEEEESSSCCH-HHHH
T ss_pred HHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHc-CCeEEEeC--CC-c--cccCCCCCEEEEEeCCCCcH-HHHH
Confidence 45788888898999999999999999999999999985 45766653 33 2 34568899999999999986 7889
Q ss_pred HHHHHHHcCCcEEEEecCCCchhhhcccceEEcCC
Q psy1915 322 ALLQVIARDGRPIVICEKGDTETQALATKTLEVPH 356 (361)
Q Consensus 322 ~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~ 356 (361)
.++.++++|+++|+||+.+++ +.+.+|.++.+|.
T Consensus 101 ~~~~ak~~g~~vi~IT~~~~s-l~~~ad~~l~~~~ 134 (180)
T 1jeo_A 101 VAKKAKNINNNIIAIVCECGN-VVEFADLTIPLEV 134 (180)
T ss_dssp HHHHHHTTCSCEEEEESSCCG-GGGGCSEEEECCC
T ss_pred HHHHHHHCCCcEEEEeCCCCh-HHHhCCEEEEeCC
Confidence 999999999999999999999 9999999999986
No 51
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=99.22 E-value=2.3e-11 Score=116.86 Aligned_cols=136 Identities=10% Similarity=0.148 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHcc--c------HHH-HHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCcc
Q psy1915 223 IIKGLKVIHEQIREVLQM--D------SEV-QQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELK 293 (361)
Q Consensus 223 ~~~~l~~l~~~~~~~l~~--~------~~~-~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~ 293 (361)
+.+++.+-|+.+++.+.. . ... .++.+.+.+.++++++|+|.++.+|+.++.++....++++..+...||.
T Consensus 14 m~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~a~~I~i~G~GtS~~aa~~~~~~~~~~~g~~~~~~~~se~~ 93 (372)
T 3tbf_A 14 MLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIR 93 (372)
T ss_dssp HHHHHHTHHHHHHHHHHTTEETTEECGGGSCSTHHHHHHSCCEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhhhhhHHHHHHHhcCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEechhHhh
Confidence 344566667777777751 1 011 1234557789999999999999999999999999999999999999998
Q ss_pred ccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHHcC-CcEEEEecCCCchhhhcccceEEcCCCCCC
Q psy1915 294 HGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARD-GRPIVICEKGDTETQALATKTLEVPHTVDC 360 (361)
Q Consensus 294 Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g-~~~v~I~~~~~~~~~~~~d~~i~~p~~~~~ 360 (361)
|... .+++++++|+++.+|++. +++++++.++++| .++|+||+.+++++++.+|.++.+|.+.|.
T Consensus 94 ~~~~-~~~~~dlvI~iS~SG~T~-e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~~~~g~E~ 159 (372)
T 3tbf_A 94 YRDN-VVVDGSLFVSISQSGETA-DTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEI 159 (372)
T ss_dssp TSCC-CCCTTEEEEEEESSSCCH-HHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEECCCCCCC
T ss_pred hccc-CCCCCCEEEEEeCCCCCH-HHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeeeecCCccc
Confidence 8654 478999999999999996 7999999999999 999999999999999999999999987663
No 52
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=99.20 E-value=4.7e-11 Score=113.38 Aligned_cols=131 Identities=12% Similarity=0.151 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHHcc----cHHHHHHHH--HHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccC
Q psy1915 223 IIKGLKVIHEQIREVLQM----DSEVQQLAK--EMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGP 296 (361)
Q Consensus 223 ~~~~l~~l~~~~~~~l~~----~~~~~~~a~--~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp 296 (361)
+.+++.+-|+.+++.+.. ... +++++ .+.+.++++++|+|.++.+|+.++.++....++++......|+.+.+
T Consensus 16 m~keI~eqP~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~~~~~~~~~~~~ 94 (342)
T 1j5x_A 16 TLKEITDQKNELKKFFENFVLNLEK-TEIFSEIQKNLTDEVLFVGCGSSYNLALTISYYFERVLKIRTKAIPAGEVAFQK 94 (342)
T ss_dssp HHHHHHHHHHTHHHHHHHTGGGTTC-------C----CCEEEEEESTHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhhhcccch-HHHHHHHHhCCCCEEEEEEchHHHHHHHHHHHHHHHhhCCeEEEECchHHHhcC
Confidence 344556667777777643 122 44554 45678999999999999999999999999788999999888887765
Q ss_pred ccCccCC-CcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCC
Q psy1915 297 LALIDNS-MPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPH 356 (361)
Q Consensus 297 ~~~i~~~-~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~ 356 (361)
.. ++++ +++|+++.+|++. +++++++.++++|.++|+||+.+++++++.+|.++.+|.
T Consensus 95 ~~-~~~~~dlvI~iS~SG~T~-e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~~~~ 153 (342)
T 1j5x_A 95 IP-DLEERGLAFLFSRTGNTT-EVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFPV 153 (342)
T ss_dssp SC-CCCSSEEEEEECSSSCCH-HHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEECCC
T ss_pred cc-cCCCCeEEEEEcCCCCCH-HHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEEcCC
Confidence 43 6677 9999999999996 799999999999999999999999999999999999987
No 53
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=99.18 E-value=1.9e-10 Score=100.51 Aligned_cols=115 Identities=11% Similarity=0.147 Sum_probs=93.3
Q ss_pred HHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHH-----HhhCcceEEEecC---------CccccCc------cCccC
Q psy1915 243 EVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIK-----ELTYMHSEGIMAG---------ELKHGPL------ALIDN 302 (361)
Q Consensus 243 ~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~-----E~~~~~a~~~~~~---------E~~Hgp~------~~i~~ 302 (361)
.++.+++.+.+.++++++|.|.++.+|.+++.++. ...++++...... ++.+... ..+++
T Consensus 34 ~~~~i~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 113 (199)
T 1x92_A 34 ASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQP 113 (199)
T ss_dssp HHHHHHHHHHTTCCEEEECSTHHHHHHHHHHHHHHTCSSSCCCCCCEEETTCCHHHHHHHHHHTCGGGTTHHHHHHHCCT
T ss_pred HHHHHHHHHHCCCEEEEEcCchhHHHHHHHHHHHhcCcccCCCCCceEecCCChhHHHHhhcCccHHHHHHHHHHhCCCC
Confidence 34666788888999999999999999999999993 3345666655432 3333221 23688
Q ss_pred CCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhc---ccceEEcCCCC
Q psy1915 303 SMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQAL---ATKTLEVPHTV 358 (361)
Q Consensus 303 ~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~---~d~~i~~p~~~ 358 (361)
++++|+++.+|++. .++++++.++++|.++|+||+.+++++.+. +|+++.+|...
T Consensus 114 ~DvvI~iS~SG~t~-~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~~~~~ 171 (199)
T 1x92_A 114 GDVLLAISTSGNSA-NVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVPSKI 171 (199)
T ss_dssp TCEEEEECSSSCCH-HHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEECSCSC
T ss_pred CCEEEEEeCCCCCH-HHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEeCCCc
Confidence 99999999999986 789999999999999999999999999999 99999999754
No 54
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=99.18 E-value=2.9e-10 Score=99.68 Aligned_cols=112 Identities=14% Similarity=0.130 Sum_probs=94.7
Q ss_pred cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHH
Q psy1915 241 DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCM 320 (361)
Q Consensus 241 ~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~ 320 (361)
.+.++++++.+.++++++++|.|.+..+|.+++.+|... +.++..+ .+. + ...+++++++|+++.+|++. .++
T Consensus 34 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~--~~~-~--~~~~~~~DvvI~iS~SG~t~-~~i 106 (200)
T 1vim_A 34 LETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHL-GYTVYVV--GET-V--TPRITDQDVLVGISGSGETT-SVV 106 (200)
T ss_dssp HHHHHHHHHHHHHSSCEEEECSHHHHHHHHHHHHHHHHT-TCCEEET--TST-T--CCCCCTTCEEEEECSSSCCH-HHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEecHHHHHHHHHHHHHHhc-CCeEEEe--CCc-c--ccCCCCCCEEEEEeCCCCcH-HHH
Confidence 356788899999999999999999999999999999776 4455443 333 2 23468899999999999986 789
Q ss_pred HHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 321 NALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 321 ~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
++++.++++|.++|+||+.+++++.+.+|.++.+|...+
T Consensus 107 ~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~~~~~~ 145 (200)
T 1vim_A 107 NISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMK 145 (200)
T ss_dssp HHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCSSCT
T ss_pred HHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEECCccc
Confidence 999999999999999999999999999999999997654
No 55
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=99.17 E-value=1e-10 Score=112.20 Aligned_cols=134 Identities=9% Similarity=0.112 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHcc----------cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCcc
Q psy1915 224 IKGLKVIHEQIREVLQM----------DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELK 293 (361)
Q Consensus 224 ~~~l~~l~~~~~~~l~~----------~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~ 293 (361)
.+++.+-|+.+++.+.. .+.+++.++.+.+.++++++|+|.++..+.-+..-+....++++......|+.
T Consensus 10 ~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~l~~~~~~l~~~~~I~i~G~G~S~~~~~~a~~~~~~l~~~~~~~~~~~e~~ 89 (367)
T 2poc_A 10 QKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFL 89 (367)
T ss_dssp HHHHHTHHHHHHHHHTTTEETTTTEECCTTTGGGHHHHHTSSEEEEEECHHHHHHHHHHHHHHHHHHCSCEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcccccccCHHHHHHHHHHHhCCCEEEEEEecHHHHHHHHHHHHHHHHhCCCeEEEehhhhH
Confidence 44556668888777752 12355667778889999999999998888877777777778898888888987
Q ss_pred ccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 294 HGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 294 Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
|.. ..+++++++|+++.+|++. +++++++.++++|.++|+||+.+++++++.+|.++.+|...|
T Consensus 90 ~~~-~~~~~~dlvI~iS~SG~T~-e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E 153 (367)
T 2poc_A 90 DRR-SPVFRDDTCVFVSQSGETA-DSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPE 153 (367)
T ss_dssp HTT-CCCCTTEEEEEEESSSCCH-HHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEECCCCCC
T ss_pred hhc-cCCCCCCEEEEEeCCCCCH-HHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEEcCCCCc
Confidence 764 4468999999999999996 799999999999999999999999999999999999997655
No 56
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=99.15 E-value=8.6e-11 Score=112.72 Aligned_cols=135 Identities=12% Similarity=0.126 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHHHccc-H-------HH-HHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCcc
Q psy1915 223 IIKGLKVIHEQIREVLQMD-S-------EV-QQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELK 293 (361)
Q Consensus 223 ~~~~l~~l~~~~~~~l~~~-~-------~~-~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~ 293 (361)
+.+++.+.|+.+++.+... + .. ++.++.+.+.++++++|+|.++.+|+.++..+....++++......|+.
T Consensus 12 m~keI~eqP~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~~~~~~e~~ 91 (368)
T 1moq_A 12 MQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFR 91 (368)
T ss_dssp HHHHHHTHHHHHHHHHTTSEETTEECCGGGCSSHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHSCCCEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhccCcccHHHHHHHHHHHHhCCCEEEEEEchHHHHHHHHHHHHHHHHhCCceEEEehhhHh
Confidence 3445666688888887521 1 11 2234567788999999999999999999998888888999888888998
Q ss_pred ccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHHcC-CcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 294 HGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARD-GRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 294 Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g-~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
|.. ..+++++++|+++.+|++. +++++++.++++| .++|+||+.+++++++.+|+++.+|...|
T Consensus 92 ~~~-~~~~~~dlvI~iS~SG~T~-e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~~~~~~e 156 (368)
T 1moq_A 92 YRK-SAVRRNSLMITLSQSGETA-DTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTE 156 (368)
T ss_dssp TSC-CCCCTTEEEEEEESSSCCH-HHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECCCCCC
T ss_pred hhc-CCCCCCCEEEEEeCCCCCH-HHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEEcCCCCe
Confidence 763 3478999999999999996 7899999999999 99999999999999999999999997655
No 57
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=99.14 E-value=6.5e-10 Score=96.80 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=94.0
Q ss_pred HHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHH-----hhCcceEEEecC---------CccccC------ccCcc
Q psy1915 242 SEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKE-----LTYMHSEGIMAG---------ELKHGP------LALID 301 (361)
Q Consensus 242 ~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E-----~~~~~a~~~~~~---------E~~Hgp------~~~i~ 301 (361)
+.++++++.+.+.++++++|.|.++.+|.+++.++.. ..++++...... ++.... ...++
T Consensus 29 ~~~~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~~d~~~~~~~~~~~~~~~~ 108 (196)
T 2yva_A 29 RAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGH 108 (196)
T ss_dssp HHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTSTTGGGHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCEEEEEeCchhhHHHHHHHHHHhccccccCCCCceEeecCchHHHHHHhcCCCHHHHHHHHHHhcCC
Confidence 4567888889999999999999999999999999983 345666655421 232221 13467
Q ss_pred CCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhc---ccceEEcCCC
Q psy1915 302 NSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQAL---ATKTLEVPHT 357 (361)
Q Consensus 302 ~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~---~d~~i~~p~~ 357 (361)
+++++|+++.+|++. .++++++.++++|.++|+||+.+++++.++ +|+++.+|..
T Consensus 109 ~~DvvI~iS~SG~t~-~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~~~~ 166 (196)
T 2yva_A 109 AGDVLLAISTRGNSR-DIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSH 166 (196)
T ss_dssp TTCEEEEECSSSCCH-HHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEECSCS
T ss_pred CCCEEEEEeCCCCCH-HHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEeCCC
Confidence 899999999999986 789999999999999999999999999988 9999999864
No 58
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=99.13 E-value=1.7e-10 Score=110.96 Aligned_cols=135 Identities=10% Similarity=0.084 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHcc----------cHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCc
Q psy1915 223 IIKGLKVIHEQIREVLQM----------DSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGEL 292 (361)
Q Consensus 223 ~~~~l~~l~~~~~~~l~~----------~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~ 292 (361)
+.+++.+-|+.+++.+.. .+.+++.++.+.+.++++++|+|.++..+.-+...+....+++.......|+
T Consensus 19 m~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~l~~~~~~l~~~~~I~i~G~G~S~~a~~~a~~~~~~l~~~~~~~~~~~d~ 98 (375)
T 2zj3_A 19 MQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELASDF 98 (375)
T ss_dssp HHHHHHTHHHHHHHHHTTTEETTTTEECCGGGTTTHHHHHHCSEEEEEECHHHHHHHHHHHHHHHHHHCSCEEEEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHHHhCCCEEEEEEecHHHHHHHHHHHHHHHHhCCCeEEEeechH
Confidence 344555667777777642 1345566677778899999999999988887777777778888888888888
Q ss_pred cccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 293 KHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 293 ~Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
.+.. ..+++++++|+++.+|++. +++++++.++++|.++|+||+.+++++++.+|.++.+|...|
T Consensus 99 ~~~~-~~~~~~dlvI~iS~SG~T~-e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E 163 (375)
T 2zj3_A 99 LDRN-TPVFRDDVCFFLSQSGETA-DTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPE 163 (375)
T ss_dssp HHTT-CCCCTTEEEEEEESSSCCH-HHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEECCCCCC
T ss_pred hhhc-cCCCCCCEEEEEeCCCCCH-HHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeeeecCCcc
Confidence 6543 4468899999999999996 799999999999999999999999999999999999997655
No 59
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=99.11 E-value=3e-10 Score=109.64 Aligned_cols=134 Identities=12% Similarity=0.108 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHHHccc----HHHHHHHHHHhc--CCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccC
Q psy1915 223 IIKGLKVIHEQIREVLQMD----SEVQQLAKEMYE--QKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGP 296 (361)
Q Consensus 223 ~~~~l~~l~~~~~~~l~~~----~~~~~~a~~l~~--~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp 296 (361)
+.+++.+-|+.+++.+... ..++++...+.. .++++++|+|.++.+|+.++.+|++..++++.++...++.+.+
T Consensus 21 m~kEI~eQP~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~g~~v~ai~~~~~~~~~ 100 (393)
T 3odp_A 21 TAKEICNQPKLWRETYEIILSQREKLKSFLDNFAKKPNAKIVITGAGSSAFVGNSVVSYLNAKENIKIEAIATTDIVSHP 100 (393)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEEEECSTHHHHHHHTTHHHHHHHSSSEEEECCHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCCeEEeCcHHHHhhh
Confidence 3445555666666666421 234444455543 5899999999999999999999999989998877655555544
Q ss_pred ccCc--cCCCcEEEEEcCCccHHHHHHHHHHHHHc--CCcEEEEecCCCchhhhccc-----ceEEcCCC
Q psy1915 297 LALI--DNSMPVIMILTRDPVYVKCMNALLQVIAR--DGRPIVICEKGDTETQALAT-----KTLEVPHT 357 (361)
Q Consensus 297 ~~~i--~~~~~vi~i~~~g~~~~~~~~~~~~~~~~--g~~~v~I~~~~~~~~~~~~d-----~~i~~p~~ 357 (361)
+... ++++++|.++.+|+|. +++++++.++++ |.++|+||+.+++++++.+| +++.+|..
T Consensus 101 ~~~~~~~~~dlvI~iS~SGeT~-e~l~al~~ak~~~~Ga~~iaIT~~~~S~La~~aD~~~~~~~i~~~~~ 169 (393)
T 3odp_A 101 FYYLKKDEPTLLISCARSGNSP-ESTAAVTLAEKIVDDISHLIITCNSEGKLALHAKRNYNSFLLLMPEE 169 (393)
T ss_dssp GGTCCTTSCEEEEEEESSSCCH-HHHHHHHHHHHHCSSEEEEEEESCTTSHHHHGGGSSSCEEEEECCGG
T ss_pred HHhcCCCCCcEEEEEeCCCCCH-HHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHhcCCCceEEEEcCCc
Confidence 3322 7889999999999996 799999999998 99999999999999999999 48888864
No 60
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=99.08 E-value=2.8e-10 Score=109.75 Aligned_cols=106 Identities=12% Similarity=0.027 Sum_probs=93.3
Q ss_pred HHhcC-CeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCc--cCCCcEEEEEcCCccHHHHHHHHHHH
Q psy1915 250 EMYEQ-KSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALI--DNSMPVIMILTRDPVYVKCMNALLQV 326 (361)
Q Consensus 250 ~l~~~-~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i--~~~~~vi~i~~~g~~~~~~~~~~~~~ 326 (361)
.+.+. ++++++|+|.++.+|+.++.++.+..++++..+...++.+.+.... ++++++|+++.+|++. +++++++.+
T Consensus 48 ~l~~~~~~I~i~G~GtS~~~a~~~~~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~-e~l~a~~~a 126 (384)
T 3c3j_A 48 LLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSP-ESVAAVELA 126 (384)
T ss_dssp HHTCTTCEEEEECSTHHHHHHHHHHHHHHHHHCSEEEECCHHHHHHCHHHHCCTTSCEEEEEEESSSCCH-HHHHHHHHH
T ss_pred HHhcCCCEEEEEEehHHHHHHHHHHHHHHHHhCCcEEEeccHHHHhChhhhhCCCCCeEEEEEeCCcCCH-HHHHHHHHH
Confidence 35666 8999999999999999999999998889998887666666665544 6889999999999996 799999999
Q ss_pred HHc--CCcEEEEecCCCchhhhccc-----ceEEcCC
Q psy1915 327 IAR--DGRPIVICEKGDTETQALAT-----KTLEVPH 356 (361)
Q Consensus 327 ~~~--g~~~v~I~~~~~~~~~~~~d-----~~i~~p~ 356 (361)
+++ |.++|+||+.+++++++.+| .++.+|.
T Consensus 127 k~~~~ga~~iaIT~~~~S~La~~ad~~~~~~~l~~~~ 163 (384)
T 3c3j_A 127 NQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPA 163 (384)
T ss_dssp HHHCSSEEEEEEESCTTSHHHHHHHTCTTBCCEECCG
T ss_pred HhhCCCCCEEEEECCCCCHHHhhhccCCcEEEEEecC
Confidence 998 89999999999999999999 8999985
No 61
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=99.07 E-value=6e-10 Score=97.08 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=87.3
Q ss_pred HHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHH-----hhCcceEEEe-cC--------C------ccccCccCccCC
Q psy1915 244 VQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKE-----LTYMHSEGIM-AG--------E------LKHGPLALIDNS 303 (361)
Q Consensus 244 ~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E-----~~~~~a~~~~-~~--------E------~~Hgp~~~i~~~ 303 (361)
++.+++.+.+.++++++|.|.++.+|..++..+.- ...+++.... .. + +.|.....++++
T Consensus 38 ~~~i~~~i~~~~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (198)
T 2xbl_A 38 ADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEG 117 (198)
T ss_dssp HHHHHHHHHTTCCEEEECSTHHHHHHHHHHHHHHSCSSSCCCCCCEEETTCCHHHHHHHHHHHCGGGTTHHHHHHHCCTT
T ss_pred HHHHHHHHHcCCEEEEEeCcHhhHHHHHHHHHHHhhhccCCCCCceEEecCChHHHHHhhccCCHHHHHHHHHHhhCCCC
Confidence 34455555788999999999999999988765432 1345555442 11 1 112222346889
Q ss_pred CcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCC
Q psy1915 304 MPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTV 358 (361)
Q Consensus 304 ~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~ 358 (361)
+++|+++.+|++. .++++++.++++|.++|+||+.+++++.+.+|.++.+|..+
T Consensus 118 d~vI~iS~SG~t~-~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~~~~~~ 171 (198)
T 2xbl_A 118 DVLIGYSTSGKSP-NILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSAD 171 (198)
T ss_dssp CEEEEECSSSCCH-HHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEECSCSS
T ss_pred CEEEEEeCCCCCH-HHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEEeCCCc
Confidence 9999999999986 78899999999999999999999999999999999999754
No 62
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=99.00 E-value=8.8e-09 Score=87.31 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=63.7
Q ss_pred cCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEecccccccCCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q psy1915 74 RGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYC 153 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~a 153 (361)
.|.++++|+|.|..++.+. +.+.-+.+..... .....++++|++|.+|+||+++..++.++.|
T Consensus 38 ~g~IyvfG~Ghs~~~~~e~------------~~~~e~l~~~~~~-----~~~~~i~~~D~vii~S~Sg~n~~~ie~A~~a 100 (170)
T 3jx9_A 38 QGKVYLDAYGEFEGLYPML------------SDGPDQMKRVTKI-----KDHKTLHAVDRVLIFTPDTERSDLLASLARY 100 (170)
T ss_dssp TCCEEEEECGGGGGGTHHH------------HTSTTCCTTEEEC-----CTTCCCCTTCEEEEEESCSCCHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHH------------HcccCCccchhhh-----hhcCCCCCCCEEEEEeCCCCCHHHHHHHHHH
Confidence 4799999999999887432 2222223322111 1134789999999999999999999999999
Q ss_pred HHcCCeEEEEEcCCCC-cc-ccccCee
Q psy1915 154 KARGALIVGVTNTVGS-SI-SRESHCG 178 (361)
Q Consensus 154 k~~g~~~i~IT~~~~S-~l-a~~ad~~ 178 (361)
|++|+++|+||+...+ .. .+++|+.
T Consensus 101 ke~G~~vIaITs~~~~~~~~~~L~d~a 127 (170)
T 3jx9_A 101 DAWHTPYSIITLGDVTETLERSIAPLA 127 (170)
T ss_dssp HHHTCCEEEEESSCCCTTGGGSSSCEE
T ss_pred HHCCCcEEEEeCcchhccccCcHHHHH
Confidence 9999999999993333 21 3566665
No 63
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=99.00 E-value=2.7e-09 Score=93.59 Aligned_cols=114 Identities=12% Similarity=0.077 Sum_probs=89.0
Q ss_pred HHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHH-----hhCcceEEEecCC-c---ccc---C--------ccCccCC
Q psy1915 244 VQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKE-----LTYMHSEGIMAGE-L---KHG---P--------LALIDNS 303 (361)
Q Consensus 244 ~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E-----~~~~~a~~~~~~E-~---~Hg---p--------~~~i~~~ 303 (361)
++.+++.+.+.++++++|.|.+..+|.+.+.+|.- ..++++....... + .|| . ...++++
T Consensus 36 ~~~i~~al~~~~~I~i~G~G~S~~~A~~~~~~l~~~~~~~r~g~~~~~~~~d~~~~~a~~~d~~~~~~~~~~l~~~~~~~ 115 (201)
T 3trj_A 36 AKAMVSCLENGGKVLVCGNGSSGVIAQHFTSKLLNHFEMERPPLPAIALTGDVATITAVGNHYGFSQIFAKQVAALGNED 115 (201)
T ss_dssp HHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHC-------CCCEEETTSCHHHHHHHHHHTCGGGTTHHHHHHHCCTT
T ss_pred HHHHHHHHHCCCEEEEEeCcHhHHHHHHHHHHhcCccCCCCCCCceEEccCChHHHHHhccCCCHHHHHHHHHHhhCCCC
Confidence 35556667778999999999999999999999973 2456665543110 0 011 0 1125889
Q ss_pred CcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcc---cceEEcCCCC
Q psy1915 304 MPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALA---TKTLEVPHTV 358 (361)
Q Consensus 304 ~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~---d~~i~~p~~~ 358 (361)
+++|+++.+|++. .++++++.++++|.++|+||+.+++++.+++ |+++.+|...
T Consensus 116 Dvvi~iS~SG~t~-~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~~~~~~ 172 (201)
T 3trj_A 116 DILLVITTSGDSE-NILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELRVPSDN 172 (201)
T ss_dssp CEEEEECSSSCCH-HHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEEESCCC
T ss_pred CEEEEEeCCCCCH-HHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEEeCCCC
Confidence 9999999999986 7999999999999999999999999999999 9999999754
No 64
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=98.99 E-value=1.1e-09 Score=105.46 Aligned_cols=136 Identities=13% Similarity=0.077 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHccc----HHHHHHH-HHHhcC--CeEEEEeccCCHHHHHHHHHHHHHhhCcc---eEEEecCCc
Q psy1915 223 IIKGLKVIHEQIREVLQMD----SEVQQLA-KEMYEQ--KSMLLMGRGYNYATCMEGALKIKELTYMH---SEGIMAGEL 292 (361)
Q Consensus 223 ~~~~l~~l~~~~~~~l~~~----~~~~~~a-~~l~~~--~~i~~iG~G~~~~~A~e~alkl~E~~~~~---a~~~~~~E~ 292 (361)
+.+++.+-|+.+++.+... ..++++. +.+.+. ++++++|+|.++.+|+.++.+|.+..+++ +.++...++
T Consensus 18 m~kEI~eQP~~~~~tl~~~~~~~~~~~~~~~~~~~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~g~~~~~v~a~~~~~~ 97 (389)
T 3i0z_A 18 TTREIYQQPDVWREAFEFYQAKREEIAAFLQEIADKHDYIKVILTGAGTSAYVGDTLLPYFKEVYDERKWNFNAIATTDI 97 (389)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEECSTHHHHHHHHHHHHHHHHSCTTTEEEEECCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHhcCCCCeEEEEEechHHHHHHHHHHHHHHHhCCCCceEEecccccc
Confidence 3445555666666665421 1233332 233444 69999999999999999999999998888 766554454
Q ss_pred cccCccC--ccCCCcEEEEEcCCccHHHHHHHHHHHHHc--CCcEEEEecCCCchhhhcccc-----eEEcCC-CCC
Q psy1915 293 KHGPLAL--IDNSMPVIMILTRDPVYVKCMNALLQVIAR--DGRPIVICEKGDTETQALATK-----TLEVPH-TVD 359 (361)
Q Consensus 293 ~Hgp~~~--i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~--g~~~v~I~~~~~~~~~~~~d~-----~i~~p~-~~~ 359 (361)
.+.++.. .++++++|.++.+|++. +++.+++.++++ |.++++||+.+++++++.+|. ++.+|. ..|
T Consensus 98 ~ase~~~~~~~~~dl~i~iS~SG~T~-e~~~al~~ak~~~~g~~~i~IT~~~~s~la~~ad~~~~~~~i~~~~~~~E 173 (389)
T 3i0z_A 98 VANPATYLKKDVATVLVSFARSGNSP-ESLATVDLAKSLVDELYQVTITCAADGKLALQAHGDDRNLLLLQPAVSND 173 (389)
T ss_dssp TTCHHHHCCTTSEEEEEEEESSSCCH-HHHHHHHHHHHHCSSEEEEEEESCTTSHHHHTSSSCTTEEEEECCGGGSC
T ss_pred ccChHHhcCCCCCcEEEEEeCCCCCH-HHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHccccccceEEeccccccc
Confidence 3433321 27889999999999996 799999999998 999999999999999999998 888884 444
No 65
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=98.95 E-value=8.8e-10 Score=103.88 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCC-
Q psy1915 225 KGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNS- 303 (361)
Q Consensus 225 ~~l~~l~~~~~~~l~~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~- 303 (361)
+++.+.|+.+++ ... ..+++++.+.+.++++++|+|.++.+|+.++.++....++++. ....|+.+.... ++++
T Consensus 5 keI~eqP~~~~~--~~~-~~~~~~~~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~-~~~se~~~~~~~-~~~~~ 79 (325)
T 2e5f_A 5 IEIKQTPDGIIK--ADK-VFNKVKDKISLPNRILYLGCGSSHFLSKLLAMVTNMHGGLGIA-LPCSEFLYSKET-YPIGE 79 (325)
T ss_dssp HHHTTHHHHHHH--HHH-HHHHHTTTCCCCSEEEEEESTHHHHHHHHHHHHHHHTTSEEEE-EEHHHHHHHGGG-SCCCS
T ss_pred HHHHHHHHHHHH--cCc-cHHHHHHHHhCCCEEEEEEChHHHHHHHHHHHHHHHHhCCCEE-EechHHhhcCcc-cCCCC
Confidence 344444655555 111 2455666677789999999999999999999999997888988 777787665433 7888
Q ss_pred -CcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCC
Q psy1915 304 -MPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPH 356 (361)
Q Consensus 304 -~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~ 356 (361)
+++|+++.+|++. +++++++.++ .++|+||+. ++++++.+|+++.+|.
T Consensus 80 ~dlvI~iS~SG~T~-e~l~a~~~ak---a~viaIT~~-~S~La~~ad~~l~~~~ 128 (325)
T 2e5f_A 80 VELAVGISRSGETT-EILLALEKIN---VKKLGITTR-ESSLTRMCDYSLVVPA 128 (325)
T ss_dssp CSEEEEECSSSCCH-HHHHHHHTCC---SCEEEEESS-SCHHHHHSSEEEECCC
T ss_pred CeEEEEEeCCCCCH-HHHHHHHHhC---CCEEEEECC-CCHHHHhcCEEEecCC
Confidence 9999999999996 6888877765 999999999 9999999999999986
No 66
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=98.93 E-value=3.1e-09 Score=91.69 Aligned_cols=113 Identities=17% Similarity=0.109 Sum_probs=86.1
Q ss_pred HHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHH-----hhCcceEEEecCCcc---------c-------cCccCccC
Q psy1915 244 VQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKE-----LTYMHSEGIMAGELK---------H-------GPLALIDN 302 (361)
Q Consensus 244 ~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E-----~~~~~a~~~~~~E~~---------H-------gp~~~i~~ 302 (361)
++.+++.+.+.++++++|.|.++.+|...+..+.- ..++++..... +.. | .-...+++
T Consensus 32 ~~~i~~~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~g~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (188)
T 1tk9_A 32 GELLCECLKKGGKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALTT-DTSALSAIGNDYGFEFVFSRQVEALGNE 110 (188)
T ss_dssp HHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHSCSSSCCCCCCEEESSC-CHHHHHHHHHHTCGGGHHHHHHHHHCCT
T ss_pred HHHHHHHHHCCCEEEEEeCcHhHHHHHHHHHHHhhhhccCCCCCceEeccC-CchhHhhhhcCCCHHHHHHHHHHHhCCC
Confidence 34455577778999999999999999988865522 22344444321 110 0 01123678
Q ss_pred CCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCC
Q psy1915 303 SMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTV 358 (361)
Q Consensus 303 ~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~ 358 (361)
++++|+++.+|++. .++++++.++++|.++|+||+.+++++.+.+|.++.+|...
T Consensus 111 ~Dvvi~iS~sG~t~-~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~~~~~~ 165 (188)
T 1tk9_A 111 KDVLIGISTSGKSP-NVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVPSDD 165 (188)
T ss_dssp TCEEEEECSSSCCH-HHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEEESCSC
T ss_pred CCEEEEEeCCCCCH-HHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEEeCCCC
Confidence 99999999999986 78999999999999999999999999999999999999754
No 67
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=98.92 E-value=1.4e-09 Score=98.12 Aligned_cols=113 Identities=11% Similarity=0.053 Sum_probs=85.7
Q ss_pred HHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEec------------CCcccc------CccCccCCCc
Q psy1915 244 VQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMA------------GELKHG------PLALIDNSMP 305 (361)
Q Consensus 244 ~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~------------~E~~Hg------p~~~i~~~~~ 305 (361)
++.+++.+.+.++++++|.|.++.+|.+++.++......++...+. .|..|| ....++++++
T Consensus 32 ~~~l~~~i~~~~~I~i~G~G~S~~~A~~~~~~l~~l~~~~~~~~~~~~l~~~~~~~~~~e~~~g~~~~~~~~~~~~~~Dv 111 (243)
T 3cvj_A 32 AHLVSEAVMNGGRFYVFGSGHSHMIAEEIYNRAGGLALVTAILPPELMLHERPNKSTYLERIEGLSKSYLKLHQVTNKDV 111 (243)
T ss_dssp HHHHHHHHHTTCCEEEEESGGGHHHHHHTSSSTTCBTTEEECCCGGGSSSSSTTHHHHHTTCTTHHHHHHHHTTCCTTCE
T ss_pred HHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhccccccCcccchhhhccCCchhhhhhhhcccHHHHHHHHhcCCCCCE
Confidence 3445666667899999999999999999887776543322211110 122233 2234688999
Q ss_pred EEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCc-----------hhhhcccceEEcCCC
Q psy1915 306 VIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDT-----------ETQALATKTLEVPHT 357 (361)
Q Consensus 306 vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~-----------~~~~~~d~~i~~p~~ 357 (361)
+|+++.+|++. .++++++.++++|.++|+||+..++ ++.+++|.+|.+|..
T Consensus 112 ~I~iS~SG~t~-~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~~~~~ 173 (243)
T 3cvj_A 112 IMIISNSGRNT-VPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLDNGAP 173 (243)
T ss_dssp EEEECSSCCSH-HHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEECCCC
T ss_pred EEEEeCCCCCH-HHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEECCCC
Confidence 99999999986 7899999999999999999998777 899999999988754
No 68
>1wiw_A Glucose-6-phosphate isomerase like protein; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.80.1.1
Probab=98.83 E-value=4e-09 Score=97.24 Aligned_cols=185 Identities=8% Similarity=-0.044 Sum_probs=120.4
Q ss_pred CCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCe----eEEcccCCCcccccchhHHHHHHH
Q psy1915 126 TPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHC----GIHINAGPEIGVASTKAYTSQFIS 201 (361)
Q Consensus 126 ~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~----~l~~~~~~e~~~~~t~s~t~~~~~ 201 (361)
...++.|++|++| +++.|.++|+++|+||+ +.||.+.|.- .+.++.+. +.......+
T Consensus 58 ~wvg~~dlvia~S----------a~~~A~rrGa~vv~vts--gG~L~~~a~~~~~~~v~vp~~~-----~pR~al~~l-- 118 (290)
T 1wiw_A 58 DWGEEGTLFLLEG----------GYDLGEAAGMALLAETG--RARVVRVGFRPGVEVHIPPSPL-----APYRYLRFL-- 118 (290)
T ss_dssp SCCSSSEEEEEEC----------SSCTTSCSTTC--CCCT--TCEEEEEESSTTCSEECCCCTT-----HHHHHHHHH--
T ss_pred CccCCCCEEEEec----------HHHHHHHcCCeEEEECC--CChHHHHHhhCCCCEEeCCCCC-----CCHHHHHHH--
Confidence 4578999999999 78899999999999998 5699988651 23332211 112222221
Q ss_pred HHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhh
Q psy1915 202 LVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQ-MDSEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELT 280 (361)
Q Consensus 202 l~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~-~~~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~ 280 (361)
++ +.. ...+.+++.+.+.+.++......+ ..+++|++|.++.+...+++ ++ ...++|+.++..|+|++
T Consensus 119 ----~~-l~~----~~~~l~~~a~~l~~~a~~~~p~~~~~~NpAK~LA~~L~~~~Pvi~-~~-~~~~~A~R~k~~l~enA 187 (290)
T 1wiw_A 119 ----LL-ATG----REEVLRSVDEALLEERRRLGPEVPVEENPAKFLAYTLLERLPLFY-SP-LFRPLEGAVQTLFARVA 187 (290)
T ss_dssp ----HH-HTT----CHHHHHHHHHHHHHHHTTTSTTSCGGGCHHHHHHHHHTTSEEEEE-CT-TCTHHHHHHHHHHHHTT
T ss_pred ----HH-hcC----chhhHHHHHHHHHHHHHhcCCccccccCHHHHHHHHHhCCCcEEE-ec-CcHHHHHHHHHHHHHhc
Confidence 11 111 123344555555555444333332 34689999999999888888 77 99999999999999999
Q ss_pred CcceEEEecCCccccC--ccCccC-----CCcEEEEEcCCccHHHHHHHHHH-HHHcCCcEEEEecCCCchhhhc
Q psy1915 281 YMHSEGIMAGELKHGP--LALIDN-----SMPVIMILTRDPVYVKCMNALLQ-VIARDGRPIVICEKGDTETQAL 347 (361)
Q Consensus 281 ~~~a~~~~~~E~~Hgp--~~~i~~-----~~~vi~i~~~g~~~~~~~~~~~~-~~~~g~~~v~I~~~~~~~~~~~ 347 (361)
+.++..-. ..|+. +..++. ..+.+++..+ . +..+..++ ++.++..+..+...+.+++.++
T Consensus 188 k~~a~~~~---~~Hne~~i~~~~~p~~~~~~~~~v~l~d---~-~r~~~~~~i~~~~~~~v~~v~~~g~s~L~~l 255 (290)
T 1wiw_A 188 KSLSLTPP---PSALEFFLVGLEARHEQGDPLAAVLLGP---G-EEAALAKEILESRVDALAEVPATGANRLAQV 255 (290)
T ss_dssp CCCCBCCC---SSHHHHHHHTTSSCGGGGTTEEEEEESC---S-HHHHHHHHHHTTTSSEEEEECCCSSSHHHHH
T ss_pred CCCccccc---cccChhhhccccCccccccceEEEEecc---h-hHHHHHHHHHHhcCCceEEEeCCCCCHHHHH
Confidence 99998754 88987 555542 2345555544 2 33455556 4567888888887777665443
No 69
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=98.83 E-value=2e-08 Score=93.71 Aligned_cols=116 Identities=14% Similarity=0.151 Sum_probs=87.8
Q ss_pred HHHHHHHHHHhcCCeEEEEeccCCHHHHH-HHHHHHHHhhCcceE---EEe-------------cCCccc---cCc--cC
Q psy1915 242 SEVQQLAKEMYEQKSMLLMGRGYNYATCM-EGALKIKELTYMHSE---GIM-------------AGELKH---GPL--AL 299 (361)
Q Consensus 242 ~~~~~~a~~l~~~~~i~~iG~G~~~~~A~-e~alkl~E~~~~~a~---~~~-------------~~E~~H---gp~--~~ 299 (361)
+.++++++.+.+.++++++|.|.++.+|. .+..++..... +.. ++. .+++.| ..+ ..
T Consensus 59 ~~i~~i~~~l~~a~rI~~~G~G~S~~lA~~~a~~~~~~~g~-~~~~~~~l~~~g~~a~~~a~e~~ed~~~~~~~~l~~~~ 137 (306)
T 1nri_A 59 LAVEQIVQAFQQGGRLIYIGAGTSGRLGVLDASECPPTFGV-STEMVKGIIAGGECAIRHPVEGAEDNTKAVLNDLQSIH 137 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEEESHHHHHHHHHHHHHHHHHHCC-CTTSEEEEETTCTHHHHSCCTTGGGCTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCEEEEEeccHhHHHHHHHHHhcccccCC-CHHHHHHHHhcchHHHhhhhhcccCcHHHHHHHHHhcC
Confidence 45677888888899999999999999995 45555544432 111 111 022222 111 23
Q ss_pred ccCCCcEEEEEcCCccHHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 300 IDNSMPVIMILTRDPVYVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 300 i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
+++++++|+++.+|++. .++++++.++++|.++|+||+.+++++.+.+|++|.+|...+
T Consensus 138 l~~~DvvI~IS~SG~T~-~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~~~g~E 196 (306)
T 1nri_A 138 FSKNDVLVGIAASGRTP-YVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIETIVGPE 196 (306)
T ss_dssp CCTTSEEEEECTTSCCH-HHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEECCCCSC
T ss_pred CCCCCEEEEEECCCCCH-HHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEcCCCCc
Confidence 67899999999999996 799999999999999999999999999999999999986554
No 70
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=98.75 E-value=3.4e-08 Score=96.46 Aligned_cols=181 Identities=14% Similarity=0.055 Sum_probs=106.5
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhc-----------CCceEEEe--cccccc-cCCCCCC-CCEEEEEcC
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT-----------ELPVMVEL--ASDFLD-RNTPVFR-DDVCFFISQ 139 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~-----------g~~~~~~~--~~e~~~-~~~~~~~-~dlvI~iS~ 139 (361)
..++++|+|+|...+.. +.+.+.... ++++.+.. +.++.. ....+++ ++++|++|.
T Consensus 79 ~~Vv~IGIGGS~LG~~~---------~~~aL~~~~~~~~~~~~~~~~~~v~~~~nvdp~~~~~~l~~L~~~~TlvIviSK 149 (460)
T 2q8n_A 79 DTVVVLGIGGSGLGNLA---------LHYSLRPLNWNEMTREERNGYARVFVVDNVDPDLMSSVLDRIDPKTTLFNVISK 149 (460)
T ss_dssp SEEEEECCGGGTHHHHH---------HHHHHSCTTGGGSCTTTTTTCCEEEEECSCCHHHHHHHHTTCCGGGEEEEEECS
T ss_pred CEEEEEecCchHHHHHH---------HHHHHHhhhhcccccccccCCcceEEecCCCHHHHHHHHhcCCCCCEEEEEEcC
Confidence 47899999999875531 233333221 45666654 333322 2234544 459999999
Q ss_pred CCCcHHHHHHHHHHHHc-----C---CeEEEEEcCCCCccccccCe-eE---Eccc--CCCcccccchhHHHHHHHHHHH
Q psy1915 140 SGETADSLMALRYCKAR-----G---ALIVGVTNTVGSSISRESHC-GI---HINA--GPEIGVASTKAYTSQFISLVMF 205 (361)
Q Consensus 140 SG~t~e~~~a~~~ak~~-----g---~~~i~IT~~~~S~la~~ad~-~l---~~~~--~~e~~~~~t~s~t~~~~~l~~l 205 (361)
||+|.|++.+++.+|+. | .++|+||++.+|||.+.||. .+ .++. |...++ .+.+ ...+
T Consensus 150 SGtT~ET~~~~~~ar~~l~~~~G~~~~~~VAvT~~~~s~L~~~A~~~Gi~~f~~~d~VGGRySv------lSav--GL~~ 221 (460)
T 2q8n_A 150 SGSTAEVMATYSIARGILEAYGLDPREHMLITTDPEKGFLRKLVKEEGFRSLEVPPGVGGRFSV------LTPV--GLLS 221 (460)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCCGGGTEEEEECSSSSHHHHHHHHHTCEEEECCTTCCGGGCT------TSHH--HHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCccCeEEEEeCCCCChHHHHHHHhCCceEeeccccCcchHH------HHHH--HHHH
Confidence 99999999999999988 7 89999999999999999986 22 4432 111111 1111 1111
Q ss_pred HHHHhhhhcchHHHHHHHHHHHHHHHHHHHHH-HcccHHHHHHH-----HHHhcCCeEEEEeccC-CHHHHHHHHHHHHH
Q psy1915 206 ALVMCEDRISLQTRRNEIIKGLKVIHEQIREV-LQMDSEVQQLA-----KEMYEQKSMLLMGRGY-NYATCMEGALKIKE 278 (361)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-l~~~~~~~~~a-----~~l~~~~~i~~iG~G~-~~~~A~e~alkl~E 278 (361)
.... +. +.+++++....+.+.+... +..+.. -.+| ....+++...++.... ....+..+...++|
T Consensus 222 ~~~~-G~------di~~lL~GA~~md~~~~~~~~~~N~~-~~~a~~~~~~~~~g~~~~~i~pY~~~L~~f~~w~qQL~~E 293 (460)
T 2q8n_A 222 AMAE-GI------DIDELHEGAKDAFEKSMKENILENPA-AMIALTHYLYLNKGKSISVMMAYSNRMIYLVDWYRQLWAE 293 (460)
T ss_dssp HHHT-TC------CHHHHHHHHHHHHHHTTCSCGGGCHH-HHHHHHHHHHHHTTCCEEEEEESSGGGHHHHHHHHHHHHH
T ss_pred HHHc-CC------CHHHHHHHHHHHHHHhccCChhhCHH-HHHHHHHHHHHhCCCCeeEEecchHHHHHHHHHHhhhhhh
Confidence 1111 11 1356677766666655433 222221 2222 1234565656666654 44556678888899
Q ss_pred hh
Q psy1915 279 LT 280 (361)
Q Consensus 279 ~~ 280 (361)
-.
T Consensus 294 S~ 295 (460)
T 2q8n_A 294 SL 295 (460)
T ss_dssp HH
T ss_pred hc
Confidence 44
No 71
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=98.61 E-value=1.5e-07 Score=90.80 Aligned_cols=181 Identities=14% Similarity=0.012 Sum_probs=110.3
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEEe--cccccc-cCCCC-CCCCEEEEEcCCCCcHHHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVEL--ASDFLD-RNTPV-FRDDVCFFISQSGETADSLMAL 150 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~~--~~e~~~-~~~~~-~~~dlvI~iS~SG~t~e~~~a~ 150 (361)
..++++|+|+|..-+. .+.+++.. .+.++.+.. +.++.. ....+ .+++++|++|.||+|.|++.++
T Consensus 67 ~~Vv~iGIGGS~LG~~---------~~~~aL~~-~~~~~~~~~n~dp~~~~~~l~~l~~~~TlviviSKSGtT~ET~~~~ 136 (415)
T 1zzg_A 67 EDFVLIGIGGSALGPK---------ALEAAFNE-SGVRFHYLDHVEPEPILRLLRTLDPRKTLVNAVSKSGSTAETLAGL 136 (415)
T ss_dssp SEEEEECCGGGTHHHH---------HHHHHHCC-SCCEEEEECSCCHHHHHHHHHHSCGGGEEEEEEESSSCCHHHHHHH
T ss_pred CEEEEEccCccHHHHH---------HHHHHHhc-CCCceEEecCCCHHHHHHHHhhCCCCCEEEEEEeCCCCCHHHHHHH
Confidence 4788999999986542 12333332 356666654 333322 12234 4556999999999999999999
Q ss_pred HHHHHc-----C----CeEEEEEcCCCCccccccCee-E---Eccc--CCCcccccchhHHHHHHHHHHHHHHHhhhhcc
Q psy1915 151 RYCKAR-----G----ALIVGVTNTVGSSISRESHCG-I---HINA--GPEIGVASTKAYTSQFISLVMFALVMCEDRIS 215 (361)
Q Consensus 151 ~~ak~~-----g----~~~i~IT~~~~S~la~~ad~~-l---~~~~--~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~ 215 (361)
+.+|+. | .++|+||++.+|||.+.||.. + .++. |...++ .+. +...++...+-
T Consensus 137 ~~ar~~l~~~~G~~~~~~~vavT~~~~s~L~~~a~~~Gi~~f~~~d~VGGRySv------~Sa--vGL~~~~~~G~---- 204 (415)
T 1zzg_A 137 AVFLKWLKAHLGEDWRRHLVVTTDPKEGPLRAFAEREGLKAFAIPKEVGGRFSA------LSP--VGLLPLAFAGA---- 204 (415)
T ss_dssp HHHHHHHHHHHGGGGGGGEEEEECSSSSHHHHHHHHHTCEEEECCTTCCGGGCT------TSH--HHHHHHHHTTC----
T ss_pred HHHHHHHHHhcCccccCeEEEEeCCCCChHHHHHHHhCCcEEEeccCCCcccHH------HHH--HHHHHHHHcCC----
Confidence 999988 7 899999999999999998743 3 4432 222222 111 11112121211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHH---HhcCCeEEEEeccC-CHHHHHHHHHHHHHhhC
Q psy1915 216 LQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKE---MYEQKSMLLMGRGY-NYATCMEGALKIKELTY 281 (361)
Q Consensus 216 ~~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~a~~---l~~~~~i~~iG~G~-~~~~A~e~alkl~E~~~ 281 (361)
+.+++++....+.+.+...+.. +..-.+|-. ..+++...++.... ....+..+...++|-.+
T Consensus 205 ---d~~~lL~GA~~md~~~~~~~~~-N~~~~~al~~~~~~g~~~~~i~pY~~~l~~f~~~~qQL~~ES~G 270 (415)
T 1zzg_A 205 ---DLDALLMGARKANETALAPLEE-SLPLKTALLLHLHRHLPVHVFMVYSERLSHLPSWFVQLHDESLG 270 (415)
T ss_dssp ---CHHHHHHHHHHHHHHHHSCGGG-CHHHHHHHHHHHTTTSSEEEEEECCSTTTTHHHHHHHHHHHHHS
T ss_pred ---CHHHHHHHHHHHHHHHhcchhh-CHHHHHHHHHHHhCCCCeEEEEECcHHHHHHHHHHHHHHHhhhc
Confidence 1366777878888777665322 333333322 23455555666654 45556678888899543
No 72
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=98.44 E-value=7.7e-07 Score=82.75 Aligned_cols=90 Identities=8% Similarity=-0.078 Sum_probs=78.7
Q ss_pred cCCeEEEEeccCCHHHHHHHHHHHHHhh-CcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHHHHHHHHHHcCC
Q psy1915 253 EQKSMLLMGRGYNYATCMEGALKIKELT-YMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVIARDG 331 (361)
Q Consensus 253 ~~~~i~~iG~G~~~~~A~e~alkl~E~~-~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~~~~~~~g~ 331 (361)
+.++++++|+|.++.+|+.++.++.... +.++......++ .++++++|+++.+|++. +++++++.++++|.
T Consensus 36 ~~~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~dlvI~iS~SG~T~-e~~~a~~~ak~~g~ 107 (302)
T 1tzb_A 36 AMPRLYISGMGGSGVVADLIRDFSLTWNWEVEVIAVKDYFL-------KARDGLLIAVSYSGNTI-ETLYTVEYAKRRRI 107 (302)
T ss_dssp CCSEEEEECCHHHHHHHHHHHHHHHHTTCSSEEEEECSSCC-------CCSSSEEEEECSSSCCH-HHHHHHHHHHHTTC
T ss_pred CCCEEEEEEecHHHHHHHHHHHHHHhhcCCceEEEeCCcCC-------CCCCCEEEEEeCCCCCH-HHHHHHHHHHHCCC
Confidence 5689999999999999999999988777 788888877666 27889999999999996 79999999999999
Q ss_pred cEEEEecCCCchhhhcccceEE
Q psy1915 332 RPIVICEKGDTETQALATKTLE 353 (361)
Q Consensus 332 ~~v~I~~~~~~~~~~~~d~~i~ 353 (361)
++|+||+.+ ++++. |..+.
T Consensus 108 ~~iaIT~~~--~La~~-~~~l~ 126 (302)
T 1tzb_A 108 PAVAITTGG--RLAQM-GVPTV 126 (302)
T ss_dssp CEEEEESST--TGGGS-SSCEE
T ss_pred eEEEECCCc--hHHHC-CeeEE
Confidence 999999988 78777 77773
No 73
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=98.21 E-value=6.8e-06 Score=81.61 Aligned_cols=184 Identities=11% Similarity=0.079 Sum_probs=108.9
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhc--CCceEEEe---cccccccC-CCCCCCCEEEEEcCCCCcHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT--ELPVMVEL---ASDFLDRN-TPVFRDDVCFFISQSGETADSLM 148 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~--g~~~~~~~---~~e~~~~~-~~~~~~dlvI~iS~SG~t~e~~~ 148 (361)
..++++|+|+|..-.. .+..++.... ++++.+.. +.++.... ..-.+++++|++|.||+|.|++.
T Consensus 144 ~~VV~IGIGGS~LGp~---------~v~~aL~~~~~~~~~v~fvsNvDp~~~~~~l~~l~~e~TLvIViSKSGtT~ETl~ 214 (549)
T 2wu8_A 144 STVVNIGIGGSDLGPV---------MVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLT 214 (549)
T ss_dssp CEEEEECCGGGTHHHH---------HHHHHTGGGCCSSCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECSSSCCHHHHH
T ss_pred ceEEEEeccchHHHHH---------HHHHHHHhhccCCCeEEEEccCCHHHHHHHHhcCCCCcEEEEEEeCCCCCHhHHH
Confidence 3678999999975432 2234444432 56666654 23332212 23356789999999999999999
Q ss_pred HHHHHHHc-----C-----CeEEEEEcCCCCcccccc-C--eeEEccc--CCCcccccchhHHHHHHHHHHHHHHHhhhh
Q psy1915 149 ALRYCKAR-----G-----ALIVGVTNTVGSSISRES-H--CGIHINA--GPEIGVASTKAYTSQFISLVMFALVMCEDR 213 (361)
Q Consensus 149 a~~~ak~~-----g-----~~~i~IT~~~~S~la~~a-d--~~l~~~~--~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~ 213 (361)
+++.+|+. | ..+|+||++. +++.+.+ | .++.++. |...++.+.-+ ..+++..+-
T Consensus 215 na~~ar~~l~~~~G~~~~~~h~VAvT~~~-s~~~~~gid~~~~F~~~d~VGGRySv~SaVG--------L~~al~~G~-- 283 (549)
T 2wu8_A 215 NATAARRWLTDALGDAAVSRHFVAVSTNK-RLVDDFGINTDNMFGFWDWVGGRYSVDSAIG--------LSLMTVIGR-- 283 (549)
T ss_dssp HHHHHHHHHHHHHCGGGGGGTEEEECSCH-HHHHHHTCCGGGEECCCTTSCGGGCTTTGGG--------HHHHHHHCH--
T ss_pred HHHHHHHHHHHhcCcchhcCEEEEECCCc-HHHHhcCcccccEEEeeecCCcchHHHHHHH--------HHHHHhcCh--
Confidence 99999987 7 6899999875 7888887 5 6666653 33333322211 111111111
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHH-HcccH-HHHHHHH----HHhcCCeEEEEeccCCH-HHHHHHHHHHHHhhCc
Q psy1915 214 ISLQTRRNEIIKGLKVIHEQIREV-LQMDS-EVQQLAK----EMYEQKSMLLMGRGYNY-ATCMEGALKIKELTYM 282 (361)
Q Consensus 214 ~~~~~~~~~~~~~l~~l~~~~~~~-l~~~~-~~~~~a~----~l~~~~~i~~iG~G~~~-~~A~e~alkl~E~~~~ 282 (361)
+.++++++....+++.+... +..+. ..-.+.. ...+++...++-..... ..+..+..-.+|-.+.
T Consensus 284 ----d~~~~lL~GA~~md~~f~~~~~~~N~p~~lal~~~~~~~~~g~~~~~~lpY~~~L~~f~~w~qQL~mES~GK 355 (549)
T 2wu8_A 284 ----DAFADFLAGFHIIDRHFATAPLESNAPVLLGLIGLWYSNFFGAQSRTVLPYSNDLSRFPAYLQQLTMESNGK 355 (549)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHSCCCEEEEEESCGGGTTHHHHHHHHHHHHHCC
T ss_pred ----hHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHHHHHHHhcCC
Confidence 23567777777777776554 22221 1222222 33456666666666443 3344566777887765
No 74
>2cxn_A Glucose-6-phosphate isomerase; 1.40A {Mus musculus} PDB: 2cvp_A 2cxo_A* 2cxp_A* 2cxq_A* 2cxr_A* 2cxs_A* 2cxt_A* 2cxu_A 1u0e_A 1u0f_A* 1u0g_A* 1jiq_A 1iri_A 1nuh_A* 1jlh_A 1iat_A 1hm5_A 1g98_A 1hox_A* 1xtb_A* ...
Probab=98.15 E-value=1.3e-05 Score=79.75 Aligned_cols=185 Identities=10% Similarity=0.043 Sum_probs=107.2
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhc--CCceEEEec--cccc-ccCCCC-CCCCEEEEEcCCCCcHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT--ELPVMVELA--SDFL-DRNTPV-FRDDVCFFISQSGETADSLM 148 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~--g~~~~~~~~--~e~~-~~~~~~-~~~dlvI~iS~SG~t~e~~~ 148 (361)
..++++|+|+|..-.. .+..++.... +.++.+... .++. .....+ .+++++|++|.||+|.|++.
T Consensus 150 ~~VV~IGIGGS~LGp~---------~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~L~~e~TLvIViSKSGtT~ETl~ 220 (557)
T 2cxn_A 150 TDIINIGIGGSDLGPL---------MVTEALKPYSKGGPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETIT 220 (557)
T ss_dssp CEEEEECCGGGTHHHH---------HHHHHTGGGGTTSCEEEEECCSSHHHHHHHHTTCCTTTEEEEEECSSSCCHHHHH
T ss_pred ceEEEEeccchHHHHH---------HHHHHHhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEEEEEcCCCCChhHHH
Confidence 3678999999975432 2234444332 466666522 1222 112334 67789999999999999999
Q ss_pred HHHHHHH----c-C------CeEEEEEcCCCCcccccc-C--eeEEccc--CCCcccccchhHHHHHHHHHHHHHHHhhh
Q psy1915 149 ALRYCKA----R-G------ALIVGVTNTVGSSISRES-H--CGIHINA--GPEIGVASTKAYTSQFISLVMFALVMCED 212 (361)
Q Consensus 149 a~~~ak~----~-g------~~~i~IT~~~~S~la~~a-d--~~l~~~~--~~e~~~~~t~s~t~~~~~l~~l~~~~~~~ 212 (361)
+++.+|+ + | ..+|+||.+. +++.+.. | .++.++. |...++.+.-+ ..+++..+
T Consensus 221 na~~ar~~l~~~~G~~~~~~~h~VavTt~~-s~~~~~gi~~~~~F~~~d~VGGRySv~SaVG--------L~~a~~~G-- 289 (557)
T 2cxn_A 221 NAETAKEWFLEAAKDPSAVAKHFVALSTNT-AKVKEFGIDPQNMFEFWDWVGGRYSLWSAIG--------LSIALHVG-- 289 (557)
T ss_dssp HHHHHHHHHHHHHCCGGGGGGTEEEEESCH-HHHHHHTCCGGGEEECCTTSCGGGCTTTGGG--------HHHHHHHC--
T ss_pred HHHHHHHHHHHhcCccchhcCEEEEEeCCc-HHHHHcCCCcccEEEeecCCCcccHHHHHHH--------HHHHHHcC--
Confidence 9999987 4 5 5799999875 7877765 4 4666653 33333322111 11111111
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHH-HcccHHH-HHHH----HHHhcCCeEEEEeccCC-HHHHHHHHHHHHHhhCcc
Q psy1915 213 RISLQTRRNEIIKGLKVIHEQIREV-LQMDSEV-QQLA----KEMYEQKSMLLMGRGYN-YATCMEGALKIKELTYMH 283 (361)
Q Consensus 213 ~~~~~~~~~~~~~~l~~l~~~~~~~-l~~~~~~-~~~a----~~l~~~~~i~~iG~G~~-~~~A~e~alkl~E~~~~~ 283 (361)
.+.++++++....+++.+... +..+.++ -.+. ....+++...++-.... ...+..+..-.+|-.+..
T Consensus 290 ----~d~~~~lL~GA~~md~~f~~~~l~~N~p~llal~~~~~~~~~g~~~~~~lpY~~~L~~f~~w~qQL~mES~GK~ 363 (557)
T 2cxn_A 290 ----FDHFEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYFQQGDMESNGKY 363 (557)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCCEEEEEESCGGGTTHHHHHHHHHHHHHCCC
T ss_pred ----hHHHHHHHHHHHHHHHHhccCChhhCHHHHHHHHHHHHHhcCCCCeEEEEEchHHHHHHHHHHHHHHHHhcCCc
Confidence 123677788877777777654 2222221 1222 22335565566666544 333445667778877653
No 75
>2o2c_A GPI, glucose-6-phosphate isomerase, glycosomal, PGI, phosphohexose; dimer; HET: G6Q; 1.58A {Trypanosoma brucei brucei} PDB: 2o2d_A* 1q50_A
Probab=98.10 E-value=7.2e-06 Score=82.19 Aligned_cols=184 Identities=9% Similarity=0.049 Sum_probs=105.8
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhc--CCceEEEe---cccccccC-CCCCCCCEEEEEcCCCCcHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT--ELPVMVEL---ASDFLDRN-TPVFRDDVCFFISQSGETADSLM 148 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~--g~~~~~~~---~~e~~~~~-~~~~~~dlvI~iS~SG~t~e~~~ 148 (361)
..++++|+|+|..-.. .+..++.... ++++.+.. +.++.... ..-.+++++|++|.||+|.|++.
T Consensus 198 ~~VV~IGIGGS~LGp~---------~v~eaL~~~~~~~~~v~fvsNvDp~~i~~~l~~l~~e~TLfIViSKSGTT~ETl~ 268 (613)
T 2o2c_A 198 RHVVNIGIGGSDLGPV---------MATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETIT 268 (613)
T ss_dssp CEEEEECCGGGTHHHH---------HHHHHTGGGSCTTSEEEEECCSSHHHHHHHHHHCCGGGEEEEEECSSSCCHHHHH
T ss_pred eeEEEEeccchHHHHH---------HHHHHhhhhccCCceEEEEccCCHHHHHHHHhcCCCCCEEEEEEeCCCCChhHHH
Confidence 3678999999975432 2234444432 45666654 22222111 22356789999999999999999
Q ss_pred HHHHHHHc-----C-----------CeEEEEEcCCCCcccccc-C--eeEEccc--CCCcccccchhHHHHHHHHHHHHH
Q psy1915 149 ALRYCKAR-----G-----------ALIVGVTNTVGSSISRES-H--CGIHINA--GPEIGVASTKAYTSQFISLVMFAL 207 (361)
Q Consensus 149 a~~~ak~~-----g-----------~~~i~IT~~~~S~la~~a-d--~~l~~~~--~~e~~~~~t~s~t~~~~~l~~l~~ 207 (361)
+++.||+. | ..+|+||.+. +++.+.. | ..+.++. |...++.+.-+ ..+++
T Consensus 269 na~~ar~~l~~~~G~~g~~~~~~~a~h~VAVTt~~-s~~~~~gi~~~~~F~~~d~VGGRySvlSaVG--------L~~a~ 339 (613)
T 2o2c_A 269 NALSARRALLDYLRSRGIDEKGSVAKHFVALSTNN-QKVKEFGIDEENMFQFWDWVGGRYSMWSAIG--------LPIMI 339 (613)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCHHHHEEEEESCH-HHHHHHTCCGGGEEECCTTSCGGGCTTSGGG--------HHHHH
T ss_pred HHHHHHHHHHHhcCCcccccchhhcCEEEEEeCCc-HHHHHcCCCccceEeeecCCCcchHHHHHHH--------HHHHH
Confidence 99998876 5 4799999875 7777765 4 3666653 33333322212 11111
Q ss_pred HHhhhhcchHHHHHHHHHHHHHHHHHHHHH-HcccHHH-HHHH----HHHhcCCeEEEEeccCC-HHHHHHHHHHHHHhh
Q psy1915 208 VMCEDRISLQTRRNEIIKGLKVIHEQIREV-LQMDSEV-QQLA----KEMYEQKSMLLMGRGYN-YATCMEGALKIKELT 280 (361)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-l~~~~~~-~~~a----~~l~~~~~i~~iG~G~~-~~~A~e~alkl~E~~ 280 (361)
..+- +.++++++....+.+.+... +..+.++ -.+. ....+++...++-.... ...+..+..-.+|-.
T Consensus 340 ~~G~------d~~~elL~GA~~md~~f~~a~l~~N~p~llall~iw~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~ 413 (613)
T 2o2c_A 340 SIGY------ENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESN 413 (613)
T ss_dssp HHCH------HHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCCEEEEEEECGGGTTHHHHHHHHHHHHH
T ss_pred HcCh------HHHHHHHHHHHHHHHHhccCChhhCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHHHHHHhc
Confidence 1111 23667777777777777654 2222221 1222 22335555555555543 334445667778877
Q ss_pred Cc
Q psy1915 281 YM 282 (361)
Q Consensus 281 ~~ 282 (361)
+.
T Consensus 414 GK 415 (613)
T 2o2c_A 414 GK 415 (613)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 76
>1t10_A GPI, glucose-6-phosphate isomerase, PGI, phosphohexose; phosphoglucose isomerase, substrate, D-fructose-6-phosphate; HET: F6P; 2.35A {Leishmania mexicana mexicana} SCOP: c.80.1.2
Probab=98.01 E-value=1.4e-05 Score=79.98 Aligned_cols=185 Identities=10% Similarity=0.066 Sum_probs=105.9
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhc--CCceEEEe---cccccccCCCC-CCCCEEEEEcCCCCcHHHHH
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT--ELPVMVEL---ASDFLDRNTPV-FRDDVCFFISQSGETADSLM 148 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~--g~~~~~~~---~~e~~~~~~~~-~~~dlvI~iS~SG~t~e~~~ 148 (361)
..++++|+|+|..-.. .+..++.... +.++.+.. +.++......+ .+++++|++|.||.|.|++.
T Consensus 197 ~~VV~IGIGGS~LGp~---------~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~l~~e~TLfIViSKSGtT~ETl~ 267 (605)
T 1t10_A 197 YNIVNIGIGGSDLGPV---------MVTEALKPFSKRDLHCFFVSNVDGTHMAEVLKQVNLEETIFIIASKTFTTQETLT 267 (605)
T ss_dssp CEEEEECCGGGTHHHH---------HHHHHTGGGSCSSSEEEEECCSSTHHHHHHHTTSCGGGEEEEEECSSSCCHHHHH
T ss_pred ceEEEEeccchHHHHH---------HHHHHhhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEEEEEeCCCCChhHHH
Confidence 3678999999975432 2234444432 45666654 33332222233 56789999999999999999
Q ss_pred HHHHHHH----c-C-----------CeEEEEEcCCCCcccccc-C--eeEEccc--CCCcccccchhHHHHHHHHHHHHH
Q psy1915 149 ALRYCKA----R-G-----------ALIVGVTNTVGSSISRES-H--CGIHINA--GPEIGVASTKAYTSQFISLVMFAL 207 (361)
Q Consensus 149 a~~~ak~----~-g-----------~~~i~IT~~~~S~la~~a-d--~~l~~~~--~~e~~~~~t~s~t~~~~~l~~l~~ 207 (361)
+++.+|+ + | ..+|+||.+. +++.+.. | .++.++. |...++.+.-+. .+++
T Consensus 268 na~~ar~~l~~~~g~~~~~~~~~~~~h~VavTt~~-s~~~~~gi~~~~~F~~~d~VGGRySv~SaVGL--------~la~ 338 (605)
T 1t10_A 268 NAMSARNALMSYLKENGISTDGAVAKHFVALSTNT-EKVREFGIDTVNMFAFWDWVGGRYSVWSAIGL--------SVML 338 (605)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTHHHHHEEEECSCH-HHHHHTTCCGGGEECCCTTSCGGGCTTSGGGH--------HHHH
T ss_pred HHHHHHHHHHHhcccccccccccccCEEEEEeCCc-hHHHHcCCCcccEEeeeccCCcchHHHHHHHH--------HHHH
Confidence 9998886 2 2 5789999875 7777775 4 3566642 333333222121 2222
Q ss_pred HHhhhhcchHHHHHHHHHHHHHHHHHHHHH-HcccHHH-HHHH----HHHhcCCeEEEEeccCC-HHHHHHHHHHHHHhh
Q psy1915 208 VMCEDRISLQTRRNEIIKGLKVIHEQIREV-LQMDSEV-QQLA----KEMYEQKSMLLMGRGYN-YATCMEGALKIKELT 280 (361)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-l~~~~~~-~~~a----~~l~~~~~i~~iG~G~~-~~~A~e~alkl~E~~ 280 (361)
..+- +.++++++....+.+.+... +..+.++ -.+. ....+++...++-.... ...+..+..-.+|-.
T Consensus 339 ~~G~------d~~~~lL~GA~~md~~f~~a~l~~N~p~llall~~~~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~ 412 (605)
T 1t10_A 339 SIGY------DNFVEFLTGAHVMDNHFASTPTEQNLPMMLALVGIWYNNFFGSETQAVLPYDQYLWRLPAYLQQLDMESN 412 (605)
T ss_dssp HHHH------HHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTTCCCEEEEEESSGGGTTHHHHHHHHHHHHH
T ss_pred hcCh------HHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhCCCCCeEEEEECHHHHHHHHHHHHHHHHHhc
Confidence 1211 23667777777777777654 2222221 1222 22335565566666544 334445667778877
Q ss_pred Ccc
Q psy1915 281 YMH 283 (361)
Q Consensus 281 ~~~ 283 (361)
+..
T Consensus 413 GK~ 415 (605)
T 1t10_A 413 GKG 415 (605)
T ss_dssp CCS
T ss_pred CCc
Confidence 653
No 77
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=97.95 E-value=1e-05 Score=78.77 Aligned_cols=183 Identities=15% Similarity=0.087 Sum_probs=101.0
Q ss_pred CCcEEEEeccccccccccchhhhhHHHHHHHHHhc------CCceEEEec---ccccc-cCCCC-CCCCEEEEEcCCCCc
Q psy1915 75 GSPLLVGIKTKTRLATDHIPILYGKATRQLLEELT------ELPVMVELA---SDFLD-RNTPV-FRDDVCFFISQSGET 143 (361)
Q Consensus 75 g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~------g~~~~~~~~---~e~~~-~~~~~-~~~dlvI~iS~SG~t 143 (361)
..++++|+|+|..-.. .+..++.... +.++..+.+ .+... ....+ .+++++|++|.||+|
T Consensus 73 ~~VV~IGIGGS~LG~~---------~v~~aL~~~~~~~~~~~~~~~fv~~NvDp~~i~~~l~~l~~~~TlviviSKSGtT 143 (445)
T 1b0z_A 73 DALVVIGIGGSYLGAR---------AAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEGKDLSINVISKSGTT 143 (445)
T ss_dssp SEEEEECCGGGTHHHH---------HHHHHHSCTTGGGSTTSCEEEEESSSCCHHHHHHHHHHHTTCCEEEEEECSSSCC
T ss_pred CEEEEEecChhHHHHH---------HHHHHHhhhcccccccCCceEEEeCCCCHHHHHHHHhhCCcCcEEEEEEeCCCCC
Confidence 3678899999985432 1233343322 234444312 12221 11223 567899999999999
Q ss_pred HHHHHHHHHHHH-----cC-----CeEEEEEcCCCCccccccCee-E---Eccc--CCCcccccchhHHHHHHHHHHHHH
Q psy1915 144 ADSLMALRYCKA-----RG-----ALIVGVTNTVGSSISRESHCG-I---HINA--GPEIGVASTKAYTSQFISLVMFAL 207 (361)
Q Consensus 144 ~e~~~a~~~ak~-----~g-----~~~i~IT~~~~S~la~~ad~~-l---~~~~--~~e~~~~~t~s~t~~~~~l~~l~~ 207 (361)
.||+.+++.+|+ .| .++|+||++..++|.+.|+.. + .++. |...++.+.-+ +..+++
T Consensus 144 ~ET~~~~~~ar~~l~~~~G~~~~~~~~vavT~~~~g~L~~~a~~~Gi~~F~~~d~VGGRySv~SavG-------llp~al 216 (445)
T 1b0z_A 144 TEPAIAFRIFRDYMEKKYGKEEARKRIYVTTDRTKGALKKLADQEGYETFVIPDNIGGRYSVLTAVG-------LLPIAV 216 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHGGGEEEEECSSCSHHHHHHHHHTCEEEECCTTBCSCCTTSTTTT-------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCchhhcCEEEEEecCCcchhHHHHHHhCCeEEeccCCCCcccHHHHHHH-------HHHHHh
Confidence 999999999997 47 789999998888999988643 3 4432 23333322111 111222
Q ss_pred HHhhhhcchHHHHHHHHHHHHHHHHHHHHH-HcccHH-HHHHHHH---HhcCCeEEEEeccCC-HHHHHHHHHHHHHhhC
Q psy1915 208 VMCEDRISLQTRRNEIIKGLKVIHEQIREV-LQMDSE-VQQLAKE---MYEQKSMLLMGRGYN-YATCMEGALKIKELTY 281 (361)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-l~~~~~-~~~~a~~---l~~~~~i~~iG~G~~-~~~A~e~alkl~E~~~ 281 (361)
.+- +++++++....+.+.+... +..+.. .-.+..- -.+++...++-.... ...+..+..-.+|-.+
T Consensus 217 -~G~-------d~~~lL~GA~~md~~~~~~~~~~N~~~~lal~~~~~~~~g~~~~~~~pY~~~L~~f~~w~qQL~~ES~G 288 (445)
T 1b0z_A 217 -AGL-------NIDRMMEGAASAYHKYNNPDLLTNESYQYAAVRNILYRKGKAIELLVNYEPSLHYVSEWWKQLFGESEG 288 (445)
T ss_dssp -HTC-------CHHHHHHHHHHHHHHHCCCCGGGCHHHHHHHHHHHHHHTTCCEEEEEESSGGGHHHHHHHHHHHHHHHC
T ss_pred -cCC-------CHHHHHHHHHHHHHHhhcCCcccCHHHHHHHHHHHHHhCCCCeEEEEEchHHHHHHHHHHHHHHHHhcc
Confidence 111 1566777766666655432 111111 1111111 124555556666543 3444456677778653
No 78
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=97.58 E-value=0.00073 Score=56.98 Aligned_cols=98 Identities=12% Similarity=0.014 Sum_probs=67.6
Q ss_pred HHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCccCCCcEEEEEcCCccHHHHHHHH
Q psy1915 244 VQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNAL 323 (361)
Q Consensus 244 ~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~~g~~~~~~~~~~ 323 (361)
++-+|+.+.+...+|+.|+|.+..++.|.-.. .-+.+...--. + .| .+++++.+++++++|... ..++.+
T Consensus 28 A~llaqai~~~g~IyvfG~Ghs~~~~~e~~~~---~e~l~~~~~~~-~-~~----~i~~~D~vii~S~Sg~n~-~~ie~A 97 (170)
T 3jx9_A 28 VRLLAQALVGQGKVYLDAYGEFEGLYPMLSDG---PDQMKRVTKIK-D-HK----TLHAVDRVLIFTPDTERS-DLLASL 97 (170)
T ss_dssp HHHHHHHHHTTCCEEEEECGGGGGGTHHHHTS---TTCCTTEEECC-T-TC----CCCTTCEEEEEESCSCCH-HHHHHH
T ss_pred HHHHHHHHhCCCEEEEECCCcHHHHHHHHHcc---cCCccchhhhh-h-cC----CCCCCCEEEEEeCCCCCH-HHHHHH
Confidence 45667777788999999999999988874222 11222211111 1 12 577899999999999874 678899
Q ss_pred HHHHHcCCcEEEEec-CCCchh-hhcccce
Q psy1915 324 LQVIARDGRPIVICE-KGDTET-QALATKT 351 (361)
Q Consensus 324 ~~~~~~g~~~v~I~~-~~~~~~-~~~~d~~ 351 (361)
..+|++|.++|+||+ ...... .+++|.+
T Consensus 98 ~~ake~G~~vIaITs~~~~~~~~~~L~d~a 127 (170)
T 3jx9_A 98 ARYDAWHTPYSIITLGDVTETLERSIAPLA 127 (170)
T ss_dssp HHHHHHTCCEEEEESSCCCTTGGGSSSCEE
T ss_pred HHHHHCCCcEEEEeCcchhccccCcHHHHH
Confidence 999999999999999 332221 2455555
No 79
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=97.43 E-value=0.00015 Score=70.75 Aligned_cols=114 Identities=15% Similarity=0.147 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHHHhh-----------CcceEEEe--cCCccccCccCcc-CCCcEE
Q psy1915 242 SEVQQLAKEMYEQKSMLLMGRGYNYATCMEGALKIKELT-----------YMHSEGIM--AGELKHGPLALID-NSMPVI 307 (361)
Q Consensus 242 ~~~~~~a~~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~-----------~~~a~~~~--~~E~~Hgp~~~i~-~~~~vi 307 (361)
+.++++++.+.+.++++++|.|.++..++.....++... .++..... .+++.+.....++ +++++|
T Consensus 66 ~~i~~~a~~i~~~~~Vv~IGIGGS~LG~~~~~~aL~~~~~~~~~~~~~~~~~~v~~~~nvdp~~~~~~l~~L~~~~TlvI 145 (460)
T 2q8n_A 66 DSVKSLEDWIINFDTVVVLGIGGSGLGNLALHYSLRPLNWNEMTREERNGYARVFVVDNVDPDLMSSVLDRIDPKTTLFN 145 (460)
T ss_dssp HHHHTTHHHHTTCSEEEEECCGGGTHHHHHHHHHHSCTTGGGSCTTTTTTCCEEEEECSCCHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEecCchHHHHHHHHHHHHhhhhcccccccccCCcceEEecCCCHHHHHHHHhcCCCCCEEEE
Confidence 456677777778899999999999999998888876442 34444443 4555555555564 456888
Q ss_pred EEEcCCccHHHHHHHHHHHHHc-----C---CcEEEEecCCCchhhhcccc----eEEcCC
Q psy1915 308 MILTRDPVYVKCMNALLQVIAR-----D---GRPIVICEKGDTETQALATK----TLEVPH 356 (361)
Q Consensus 308 ~i~~~g~~~~~~~~~~~~~~~~-----g---~~~v~I~~~~~~~~~~~~d~----~i~~p~ 356 (361)
+++-+|.|. +++.+.+.++++ | .++|+||+..++++.+.+|. ++.+|.
T Consensus 146 viSKSGtT~-ET~~~~~~ar~~l~~~~G~~~~~~VAvT~~~~s~L~~~A~~~Gi~~f~~~d 205 (460)
T 2q8n_A 146 VISKSGSTA-EVMATYSIARGILEAYGLDPREHMLITTDPEKGFLRKLVKEEGFRSLEVPP 205 (460)
T ss_dssp EECSSSCCH-HHHHHHHHHHHHHHHTTCCGGGTEEEEECSSSSHHHHHHHHHTCEEEECCT
T ss_pred EEcCCCCCH-HHHHHHHHHHHHHHHhcCCccCeEEEEeCCCCChHHHHHHHhCCceEeecc
Confidence 888899887 566666666655 5 68999999878888777765 456664
No 80
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=97.12 E-value=0.00029 Score=67.88 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=78.4
Q ss_pred HHHHHHHHHHh-cCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEe--cCCccccCccCc-cCCCcEEEEEcCCccHH
Q psy1915 242 SEVQQLAKEMY-EQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIM--AGELKHGPLALI-DNSMPVIMILTRDPVYV 317 (361)
Q Consensus 242 ~~~~~~a~~l~-~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~--~~E~~Hgp~~~i-~~~~~vi~i~~~g~~~~ 317 (361)
+.++++++. . +.+.++++|.|.++.-++.....++. ...+....+ .+++.+.....+ .+++++|+++-+|.|.
T Consensus 54 ~~i~~i~~~-~~~~~~Vv~iGIGGS~LG~~~~~~aL~~-~~~~~~~~~n~dp~~~~~~l~~l~~~~TlviviSKSGtT~- 130 (415)
T 1zzg_A 54 REVRRYREA-NPWVEDFVLIGIGGSALGPKALEAAFNE-SGVRFHYLDHVEPEPILRLLRTLDPRKTLVNAVSKSGSTA- 130 (415)
T ss_dssp HHHHHHHHT-CTTCSEEEEECCGGGTHHHHHHHHHHCC-SCCEEEEECSCCHHHHHHHHHHSCGGGEEEEEEESSSCCH-
T ss_pred HHHHHHHHH-hcCCCEEEEEccCccHHHHHHHHHHHhc-CCCceEEecCCCHHHHHHHHhhCCCCCEEEEEEeCCCCCH-
Confidence 345666665 4 46899999999999888876666654 445555544 556665555556 4567888888899887
Q ss_pred HHHHHHHHHHHc-----C----CcEEEEecCCCchhhhcccce----EEcCC
Q psy1915 318 KCMNALLQVIAR-----D----GRPIVICEKGDTETQALATKT----LEVPH 356 (361)
Q Consensus 318 ~~~~~~~~~~~~-----g----~~~v~I~~~~~~~~~~~~d~~----i~~p~ 356 (361)
+++.+.+.++++ | .++|+||+..++++.+.++.. +.+|.
T Consensus 131 ET~~~~~~ar~~l~~~~G~~~~~~~vavT~~~~s~L~~~a~~~Gi~~f~~~d 182 (415)
T 1zzg_A 131 ETLAGLAVFLKWLKAHLGEDWRRHLVVTTDPKEGPLRAFAEREGLKAFAIPK 182 (415)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGGGGEEEEECSSSSHHHHHHHHHTCEEEECCT
T ss_pred HHHHHHHHHHHHHHHhcCccccCeEEEEeCCCCChHHHHHHHhCCcEEEecc
Confidence 566666666655 6 789999998778876666543 46664
No 81
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=96.18 E-value=0.0019 Score=62.57 Aligned_cols=48 Identities=27% Similarity=0.333 Sum_probs=39.9
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHH----c-C-----CeEEEEEcCCCCccccccC
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKA----R-G-----ALIVGVTNTVGSSISRESH 176 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~----~-g-----~~~i~IT~~~~S~la~~ad 176 (361)
.+.+++|++|.||.|.|+...++.+|+ + | ..+|++|+...|+|.+.|+
T Consensus 132 ~~~Tl~iViSKSgtT~ET~~n~~~~r~~l~~~~g~~~~~~h~vavT~~~~g~L~~~a~ 189 (446)
T 3ff1_A 132 DKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLAT 189 (446)
T ss_dssp GCCEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHEEEEECSSCSHHHHHHH
T ss_pred ccceEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCcccccceEEEEeCCCcchhhhHHH
Confidence 467899999999999999999998874 2 4 3689999887799987775
No 82
>2o3f_A Putative HTH-type transcriptional regulator YBBH; APC85504, putative transcriptional regulator YBBH; HET: MLY; 1.75A {Bacillus subtilis} SCOP: a.4.1.20
Probab=96.05 E-value=0.00088 Score=52.41 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=18.8
Q ss_pred HHHHHHHhhhccCCCCCCCC
Q psy1915 18 ELLIKGLKRLEYRGYDSSGN 37 (361)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~~~ 37 (361)
.||+||||||||+||.+++.
T Consensus 54 aTv~Rf~kklG~~gf~efk~ 73 (111)
T 2o3f_A 54 AAVIRLCXSLGLKGFQDLXM 73 (111)
T ss_dssp HHHHHHHHHTTCSSHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHH
Confidence 49999999999999999987
No 83
>3iwf_A Transcription regulator RPIR family; transcriptional, N-terminal, PSI, MCSG, structural genomics, midwest center structural genomics; 1.40A {Staphylococcus epidermidis}
Probab=96.02 E-value=0.00072 Score=52.55 Aligned_cols=20 Identities=15% Similarity=0.263 Sum_probs=18.7
Q ss_pred HHHHHHHhhhccCCCCCCCC
Q psy1915 18 ELLIKGLKRLEYRGYDSSGN 37 (361)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~~~ 37 (361)
.||+||||||||+||++++.
T Consensus 50 aTv~Rf~kkLGf~gf~efk~ 69 (107)
T 3iwf_A 50 TSIIRLSKKVTPGGFNELKT 69 (107)
T ss_dssp HHHHHHHHHHSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHH
Confidence 48999999999999999987
No 84
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=95.37 E-value=0.027 Score=55.95 Aligned_cols=102 Identities=5% Similarity=-0.059 Sum_probs=62.3
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHHhh--CcceEEEec--CCccccCccCc-cCCCcEEEEEcCCccHHHHHHHHHHHHH
Q psy1915 254 QKSMLLMGRGYNYATCMEGALKIKELT--YMHSEGIMA--GELKHGPLALI-DNSMPVIMILTRDPVYVKCMNALLQVIA 328 (361)
Q Consensus 254 ~~~i~~iG~G~~~~~A~e~alkl~E~~--~~~a~~~~~--~E~~Hgp~~~i-~~~~~vi~i~~~g~~~~~~~~~~~~~~~ 328 (361)
.+.++++|.|.++.-.+-...-++... .++....+- +...+--...+ .+++++|+++-+|.|. +++...+.+++
T Consensus 143 i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~~~~~l~~l~~e~TLvIViSKSGtT~-ETl~na~~ar~ 221 (549)
T 2wu8_A 143 ISTVVNIGIGGSDLGPVMVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTL-ETLTNATAARR 221 (549)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGCCSSCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECSSSCCH-HHHHHHHHHHH
T ss_pred cceEEEEeccchHHHHHHHHHHHHhhccCCCeEEEEccCCHHHHHHHHhcCCCCcEEEEEEeCCCCCH-hHHHHHHHHHH
Confidence 589999999999877665554444332 233333320 11111122234 3567788887789886 56655555554
Q ss_pred c-----C-----CcEEEEecCCCchhhhcc-c--ceEEcCCC
Q psy1915 329 R-----D-----GRPIVICEKGDTETQALA-T--KTLEVPHT 357 (361)
Q Consensus 329 ~-----g-----~~~v~I~~~~~~~~~~~~-d--~~i~~p~~ 357 (361)
. | .++|+||+.+ +++.+.. | .++.+|..
T Consensus 222 ~l~~~~G~~~~~~h~VAvT~~~-s~~~~~gid~~~~F~~~d~ 262 (549)
T 2wu8_A 222 WLTDALGDAAVSRHFVAVSTNK-RLVDDFGINTDNMFGFWDW 262 (549)
T ss_dssp HHHHHHCGGGGGGTEEEECSCH-HHHHHHTCCGGGEECCCTT
T ss_pred HHHHhcCcchhcCEEEEECCCc-HHHHhcCcccccEEEeeec
Confidence 4 6 5788888876 4666665 4 78888854
No 85
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=95.10 E-value=0.024 Score=55.00 Aligned_cols=113 Identities=12% Similarity=0.148 Sum_probs=69.1
Q ss_pred HHHHHHHHHh-cCCeEEEEeccCCHHHHHHHHHHHHHhhC------cceEEE---ecCCccccCccCc-cCCCcEEEEEc
Q psy1915 243 EVQQLAKEMY-EQKSMLLMGRGYNYATCMEGALKIKELTY------MHSEGI---MAGELKHGPLALI-DNSMPVIMILT 311 (361)
Q Consensus 243 ~~~~~a~~l~-~~~~i~~iG~G~~~~~A~e~alkl~E~~~------~~a~~~---~~~E~~Hgp~~~i-~~~~~vi~i~~ 311 (361)
.++++++++. +.+.++++|.|.++.-++-...-++...+ .+...+ ..+++.+.....+ .+++++|+++-
T Consensus 60 ~i~~~a~~v~~~~~~VV~IGIGGS~LG~~~v~~aL~~~~~~~~~~~~~~~fv~~NvDp~~i~~~l~~l~~~~TlviviSK 139 (445)
T 1b0z_A 60 RIKQAAERIRNHSDALVVIGIGGSYLGARAAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEGKDLSINVISK 139 (445)
T ss_dssp HHHHHHHHHHHHCSEEEEECCGGGTHHHHHHHHHHSCTTGGGSTTSCEEEEESSSCCHHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHHHHHHhcCCEEEEEecChhHHHHHHHHHHHhhhcccccccCCceEEEeCCCCHHHHHHHHhhCCcCcEEEEEEeC
Confidence 4556666654 46899999999998777755554544321 222222 1124444444445 45678888888
Q ss_pred CCccHHHHHHHHHHHHH-----cC-----CcEEEEecCCCchhhhcccc----eEEcCC
Q psy1915 312 RDPVYVKCMNALLQVIA-----RD-----GRPIVICEKGDTETQALATK----TLEVPH 356 (361)
Q Consensus 312 ~g~~~~~~~~~~~~~~~-----~g-----~~~v~I~~~~~~~~~~~~d~----~i~~p~ 356 (361)
+|.|. +++.+.+.+++ .| .++|+||+.++.++.+.++. ++.+|.
T Consensus 140 SGtT~-ET~~~~~~ar~~l~~~~G~~~~~~~~vavT~~~~g~L~~~a~~~Gi~~F~~~d 197 (445)
T 1b0z_A 140 SGTTT-EPAIAFRIFRDYMEKKYGKEEARKRIYVTTDRTKGALKKLADQEGYETFVIPD 197 (445)
T ss_dssp SSCCH-HHHHHHHHHHHHHHHHHCHHHHGGGEEEEECSSCSHHHHHHHHHTCEEEECCT
T ss_pred CCCCH-HHHHHHHHHHHHHHHhcCchhhcCEEEEEecCCcchhHHHHHHhCCeEEeccC
Confidence 89887 45555555543 35 68999998876666555543 456764
No 86
>2cxn_A Glucose-6-phosphate isomerase; 1.40A {Mus musculus} PDB: 2cvp_A 2cxo_A* 2cxp_A* 2cxq_A* 2cxr_A* 2cxs_A* 2cxt_A* 2cxu_A 1u0e_A 1u0f_A* 1u0g_A* 1jiq_A 1iri_A 1nuh_A* 1jlh_A 1iat_A 1hm5_A 1g98_A 1hox_A* 1xtb_A* ...
Probab=94.88 E-value=0.097 Score=52.05 Aligned_cols=102 Identities=8% Similarity=0.001 Sum_probs=64.0
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHHhh--CcceEEE--ecCCccccCccCc-cCCCcEEEEEcCCccHHHHHHHHHHHHH
Q psy1915 254 QKSMLLMGRGYNYATCMEGALKIKELT--YMHSEGI--MAGELKHGPLALI-DNSMPVIMILTRDPVYVKCMNALLQVIA 328 (361)
Q Consensus 254 ~~~i~~iG~G~~~~~A~e~alkl~E~~--~~~a~~~--~~~E~~Hgp~~~i-~~~~~vi~i~~~g~~~~~~~~~~~~~~~ 328 (361)
.+.++++|.|.++.-.+-...-++... ..+.... ..+++.+--...+ .+++++|+++-+|.|. +++.+.+.+++
T Consensus 149 i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~L~~e~TLvIViSKSGtT~-ETl~na~~ar~ 227 (557)
T 2cxn_A 149 ITDIINIGIGGSDLGPLMVTEALKPYSKGGPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQ-ETITNAETAKE 227 (557)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGGTTSCEEEEECCSSHHHHHHHHTTCCTTTEEEEEECSSSCCH-HHHHHHHHHHH
T ss_pred cceEEEEeccchHHHHHHHHHHHhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEEEEEcCCCCCh-hHHHHHHHHHH
Confidence 479999999999877765555554432 3344433 1225555555556 4567777777788886 45655555543
Q ss_pred ----c-C------CcEEEEecCCCchhhhcc-c--ceEEcCCC
Q psy1915 329 ----R-D------GRPIVICEKGDTETQALA-T--KTLEVPHT 357 (361)
Q Consensus 329 ----~-g------~~~v~I~~~~~~~~~~~~-d--~~i~~p~~ 357 (361)
+ | .++|+||+.+ +++.+.. | .++.+|..
T Consensus 228 ~l~~~~G~~~~~~~h~VavTt~~-s~~~~~gi~~~~~F~~~d~ 269 (557)
T 2cxn_A 228 WFLEAAKDPSAVAKHFVALSTNT-AKVKEFGIDPQNMFEFWDW 269 (557)
T ss_dssp HHHHHHCCGGGGGGTEEEEESCH-HHHHHHTCCGGGEEECCTT
T ss_pred HHHHhcCccchhcCEEEEEeCCc-HHHHHcCCCcccEEEeecC
Confidence 4 4 4688888876 5554444 3 58888854
No 87
>3ljk_A Glucose-6-phosphate isomerase; structural genomics, IDP02733, cytoplasm, gluconeogenesis, glycolysis; HET: MSE MES; 1.48A {Francisella tularensis} PDB: 3m5p_A* 3q7i_A* 3q88_A*
Probab=94.64 E-value=0.089 Score=52.04 Aligned_cols=183 Identities=12% Similarity=0.088 Sum_probs=90.1
Q ss_pred CcEEEEeccccccccccchhhhhHHHHHHHHHh--cCCceEEEeccc---ccc-cCCCCCCCCEEEEEcCCCCcHHHHHH
Q psy1915 76 SPLLVGIKTKTRLATDHIPILYGKATRQLLEEL--TELPVMVELASD---FLD-RNTPVFRDDVCFFISQSGETADSLMA 149 (361)
Q Consensus 76 ~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~--~g~~~~~~~~~e---~~~-~~~~~~~~dlvI~iS~SG~t~e~~~a 149 (361)
.++++|+|+|..-. .+. ...+... -+..+.+....+ +.. ....-.+.+++|++|.||.|.|+...
T Consensus 142 ~VV~IGIGGS~LGp-~~v--------~eaL~~~~~~~~~~~Fv~NvDp~~l~~~L~~l~~~~TLfiViSKSgtT~ET~~n 212 (543)
T 3ljk_A 142 DIVNIGIGGSDLGP-KMV--------VRALQPYHCTDLKVHFVSNVDADSLLQALHVVDPETTLLIIASKSFSTEETLLN 212 (543)
T ss_dssp EEEEECCGGGTHHH-HHH--------HHHTGGGCCSSCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECTTSCCHHHHHH
T ss_pred eEEEEecccchHHH-HHH--------HHHhhhhccCCCeEEEEeCCCHHHHHHHHhhCCcccEEEEEecCCCCCHHHHHH
Confidence 57899999987432 111 1222221 234454443222 111 11223466799999999999999998
Q ss_pred HHHHHH----c-C------CeEEEEEcCCCCcccccc---CeeEEccc--CCCcccccchhHHHHHHHHHHHHHHHhhhh
Q psy1915 150 LRYCKA----R-G------ALIVGVTNTVGSSISRES---HCGIHINA--GPEIGVASTKAYTSQFISLVMFALVMCEDR 213 (361)
Q Consensus 150 ~~~ak~----~-g------~~~i~IT~~~~S~la~~a---d~~l~~~~--~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~ 213 (361)
++.+|+ + | -..|+||.+. +.+.+.. +..+.++. |-..++-+..+. .+++.++-
T Consensus 213 ~~~ar~wl~~~~g~~~~~~khfvAvTt~~-~~a~~~Gi~~~~~F~~~d~VGGRySv~SaVGL--------~~a~~~G~-- 281 (543)
T 3ljk_A 213 SISAREWLLDHYEDEKAVANHFVAISSKL-DKVKEFGIDLEHCYKMWDWVGGRYSLWSSIGM--------SIAFAIGY-- 281 (543)
T ss_dssp HHHHHHHHHHHHCCGGGGGGTEEEECSCH-HHHHHHTCCGGGEECCCTTSCGGGCTTSGGGH--------HHHHHHCH--
T ss_pred HHHHHHHHHHhcCCcccccCeEEEEcCCh-HHHHHcCCCccCEEECCCCCCCcCcCcchhHH--------HHHHHcCc--
Confidence 887763 2 2 3488898763 3333321 12344432 222333222221 11111111
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHH-HcccHH-HHH----HHHHHhcCCeEEEEeccCCHH-HHHHHHHHHHHhhCc
Q psy1915 214 ISLQTRRNEIIKGLKVIHEQIREV-LQMDSE-VQQ----LAKEMYEQKSMLLMGRGYNYA-TCMEGALKIKELTYM 282 (361)
Q Consensus 214 ~~~~~~~~~~~~~l~~l~~~~~~~-l~~~~~-~~~----~a~~l~~~~~i~~iG~G~~~~-~A~e~alkl~E~~~~ 282 (361)
+.++++++.-..+.+.+... +..+.+ .-. +.....+.+...++-...... .+..+..-.+|-.+.
T Consensus 282 ----d~~~~lL~GA~~md~~f~~~~l~~N~p~llAl~~~~~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK 353 (543)
T 3ljk_A 282 ----DNFEKLLAGAYSVDKHFKETEFSKNIPVIMALLASYYSCTYNSQSQALLPYDERLCYFVDYLQQADMESNGK 353 (543)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHTCCCEEEEEECSGGGTTHHHHHHHHHHHHHCC
T ss_pred ----HHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhcCCCCeEEEEEChHHHHHHHHHHHHHHHhccCC
Confidence 12445555555554444332 111211 111 223344667777777665533 344456667787764
No 88
>4em6_D Glucose-6-phosphate isomerase; GPI, phosphoglucose isomerase phosphohexose isomerase, PHI, ssgcid; 1.90A {Brucella melitensis BV}
Probab=94.55 E-value=0.12 Score=51.29 Aligned_cols=183 Identities=10% Similarity=0.023 Sum_probs=88.9
Q ss_pred CcEEEEeccccccccccchhhhhHHHHHHHHHh-cCCceEEEeccc---cccc-CCCCCCCCEEEEEcCCCCcHHHHHHH
Q psy1915 76 SPLLVGIKTKTRLATDHIPILYGKATRQLLEEL-TELPVMVELASD---FLDR-NTPVFRDDVCFFISQSGETADSLMAL 150 (361)
Q Consensus 76 ~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~-~g~~~~~~~~~e---~~~~-~~~~~~~dlvI~iS~SG~t~e~~~a~ 150 (361)
.++++|+|+|..-. .+. ...+... -+..+.+....+ +... ...-.+.+++|++|.||.|.|+...+
T Consensus 152 ~vV~IGIGGS~LGp-~~v--------~eAL~~~~~~~~~~Fv~NvDp~~l~~~L~~l~~~~TLfiViSKSgtT~ET~~n~ 222 (553)
T 4em6_D 152 DIVNIGIGGSDLGP-VMA--------TLALAPYHDEPRAHFVSNIDGAHIADTLSPLDPASTLIIVASKTFTTIETMTNA 222 (553)
T ss_dssp EEEEECCGGGTHHH-HHH--------HHHTGGGCCSSEEEEECCSSHHHHHHHHTTSCGGGEEEEEECSSSCCHHHHHHH
T ss_pred eEEEEecccccHHH-HHH--------HHHHhccCCCCeEEEEeCCCHHHHHHHHhhCCcCcEEEEEEeCCCCCHHHHHHH
Confidence 57899999987432 111 1112111 234444443221 1111 12234567999999999999999988
Q ss_pred HHHHH----c------CCeEEEEEcCCCCcccccc---CeeEEccc--CCCcccccchhHHHHHHHHHHHHHHHhhhhcc
Q psy1915 151 RYCKA----R------GALIVGVTNTVGSSISRES---HCGIHINA--GPEIGVASTKAYTSQFISLVMFALVMCEDRIS 215 (361)
Q Consensus 151 ~~ak~----~------g~~~i~IT~~~~S~la~~a---d~~l~~~~--~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~ 215 (361)
+.+|+ + +-..|+||.+. +.+.+.. +..+.++. |-..++-+..+. .+++.++-
T Consensus 223 ~~ar~wl~~~~~~~~~~kh~vAvTt~~-~~a~~~Gi~~~~~F~~~d~VGGRySv~SaVGL--------~~a~~~G~---- 289 (553)
T 4em6_D 223 QTARKWVADTLGEAAVGAHFAAVSTAL-DKVAAFGIPEDRVFGFWDWVGGRYSVWSAIGL--------PVMIAVGP---- 289 (553)
T ss_dssp HHHHHHHHHHHCGGGGGGTEEEECSCH-HHHHHHTCCGGGEECCCTTSCGGGCTTSGGGH--------HHHHHHCH----
T ss_pred HHHHHHHHHhcCcccccCeEEEEcCCc-HHHHHcCCccccEEecCCCcCccccccchhhH--------HHHHHcCc----
Confidence 77663 1 23689998753 3333322 12354432 222333222221 11111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH-HcccHH-HHH----HHHHHhcCCeEEEEeccCCH-HHHHHHHHHHHHhhCc
Q psy1915 216 LQTRRNEIIKGLKVIHEQIREV-LQMDSE-VQQ----LAKEMYEQKSMLLMGRGYNY-ATCMEGALKIKELTYM 282 (361)
Q Consensus 216 ~~~~~~~~~~~l~~l~~~~~~~-l~~~~~-~~~----~a~~l~~~~~i~~iG~G~~~-~~A~e~alkl~E~~~~ 282 (361)
+.++++++.-..+.+.+... +..+.+ .-. +...+.+++...++-..... ..+..+..-.+|-.+.
T Consensus 290 --d~~~~lL~GA~~md~~f~~~~l~~N~p~llAl~~~~~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK 361 (553)
T 4em6_D 290 --DNFRKFLAGAHAMDVHFRDAPLEKNLPVMLGLIGYWHRAICGYGSRAIIPYDQRLSRLPAYLQQLDMESNGK 361 (553)
T ss_dssp --HHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCCEEEEEEECGGGTTHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhcCCCCeEEEEEChHHHHHHHHHHHHHHHhccCC
Confidence 12445555555555444332 112211 112 22233456666666665543 3344456667787765
No 89
>2o2c_A GPI, glucose-6-phosphate isomerase, glycosomal, PGI, phosphohexose; dimer; HET: G6Q; 1.58A {Trypanosoma brucei brucei} PDB: 2o2d_A* 1q50_A
Probab=92.51 E-value=0.14 Score=51.41 Aligned_cols=102 Identities=8% Similarity=0.025 Sum_probs=58.3
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHHhh--CcceEEEec--CCccccCccCc-cCCCcEEEEEcCCccHHHHHHHHHHHHH
Q psy1915 254 QKSMLLMGRGYNYATCMEGALKIKELT--YMHSEGIMA--GELKHGPLALI-DNSMPVIMILTRDPVYVKCMNALLQVIA 328 (361)
Q Consensus 254 ~~~i~~iG~G~~~~~A~e~alkl~E~~--~~~a~~~~~--~E~~Hgp~~~i-~~~~~vi~i~~~g~~~~~~~~~~~~~~~ 328 (361)
.+.++++|.|.++.-.+-...-++... .++....+- +...+--...+ .+++++|+++-+|.|. +++.+.+.+++
T Consensus 197 i~~VV~IGIGGS~LGp~~v~eaL~~~~~~~~~v~fvsNvDp~~i~~~l~~l~~e~TLfIViSKSGTT~-ETl~na~~ar~ 275 (613)
T 2o2c_A 197 IRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQ-ETITNALSARR 275 (613)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGSCTTSEEEEECCSSHHHHHHHHHHCCGGGEEEEEECSSSCCH-HHHHHHHHHHH
T ss_pred eeeEEEEeccchHHHHHHHHHHhhhhccCCceEEEEccCCHHHHHHHHhcCCCCCEEEEEEeCCCCCh-hHHHHHHHHHH
Confidence 478999999998777665444444332 233333320 11111112223 3567788888889887 45545444433
Q ss_pred c-----C-----------CcEEEEecCCCchhhhcc-c--ceEEcCCC
Q psy1915 329 R-----D-----------GRPIVICEKGDTETQALA-T--KTLEVPHT 357 (361)
Q Consensus 329 ~-----g-----------~~~v~I~~~~~~~~~~~~-d--~~i~~p~~ 357 (361)
. | .++|+||+.+ +++.+.. | .++.+|..
T Consensus 276 ~l~~~~G~~g~~~~~~~a~h~VAVTt~~-s~~~~~gi~~~~~F~~~d~ 322 (613)
T 2o2c_A 276 ALLDYLRSRGIDEKGSVAKHFVALSTNN-QKVKEFGIDEENMFQFWDW 322 (613)
T ss_dssp HHHHHHHHTTCCCTTCHHHHEEEEESCH-HHHHHHTCCGGGEEECCTT
T ss_pred HHHHhcCCcccccchhhcCEEEEEeCCc-HHHHHcCCCccceEeeecC
Confidence 3 4 3678888876 5554443 3 57888753
No 90
>3hjb_A Glucose-6-phosphate isomerase; PGI, IDP01329, gluconeogenesi glycolysis, structural genomics, center for STRU genomics of infectious diseases; HET: PG4; 1.50A {Vibrio cholerae} PDB: 3nbu_A
Probab=92.29 E-value=0.49 Score=46.99 Aligned_cols=83 Identities=11% Similarity=0.089 Sum_probs=47.6
Q ss_pred CcEEEEeccccccccccchhhhhHHHHHHHHHh-cCCceEEEeccc---ccc-cCCCCCCCCEEEEEcCCCCcHHHHHHH
Q psy1915 76 SPLLVGIKTKTRLATDHIPILYGKATRQLLEEL-TELPVMVELASD---FLD-RNTPVFRDDVCFFISQSGETADSLMAL 150 (361)
Q Consensus 76 ~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~-~g~~~~~~~~~e---~~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~ 150 (361)
.++++|+|+|..-. .+. ...+... .+..+.+....+ +.. ....-.+.+++|++|.||.|.|+...+
T Consensus 174 ~VV~IGIGGS~LGp-~~v--------~eAL~~~~~~~~l~FvsNvDp~~l~~~L~~Ld~~~TLfiViSKSgtT~ET~~n~ 244 (574)
T 3hjb_A 174 DVVNIGIGGSDLGP-YMV--------TEALVPYKNHLTVHFVSNVDGTHMAETLKNVDPETTLFLVASKTFTTQETMTNA 244 (574)
T ss_dssp EEEEECCGGGTHHH-HHH--------HHHTGGGCCSCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECSSSCCHHHHHHH
T ss_pred eEEEEecccchHHH-HHH--------HHHhhcccCCCeEEEEeCCCHHHHHHHHhcCCcccEEEEEeCCCCCCHHHHHHH
Confidence 57899999987432 111 1112111 134444443211 111 112234567899999999999999987
Q ss_pred HHHHH----c-C------CeEEEEEcCC
Q psy1915 151 RYCKA----R-G------ALIVGVTNTV 167 (361)
Q Consensus 151 ~~ak~----~-g------~~~i~IT~~~ 167 (361)
+.+|+ + | -..|+||.+.
T Consensus 245 ~~ar~wl~~~~~~~~~~~khfVavTt~~ 272 (574)
T 3hjb_A 245 HTARDWFLKAAGDEAHVAKHFAALSTNG 272 (574)
T ss_dssp HHHHHHHHHHHCSGGGGGGTEEEESSCH
T ss_pred HHHHHHHHHhcCCcchhcCEEEEEcCCh
Confidence 76552 2 2 2488898653
No 91
>1t10_A GPI, glucose-6-phosphate isomerase, PGI, phosphohexose; phosphoglucose isomerase, substrate, D-fructose-6-phosphate; HET: F6P; 2.35A {Leishmania mexicana mexicana} SCOP: c.80.1.2
Probab=91.11 E-value=0.37 Score=48.23 Aligned_cols=102 Identities=7% Similarity=0.002 Sum_probs=58.0
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHHhh--CcceEEEe--cCCccccCccCc-cCCCcEEEEEcCCccHHHHHHHHHHHHH
Q psy1915 254 QKSMLLMGRGYNYATCMEGALKIKELT--YMHSEGIM--AGELKHGPLALI-DNSMPVIMILTRDPVYVKCMNALLQVIA 328 (361)
Q Consensus 254 ~~~i~~iG~G~~~~~A~e~alkl~E~~--~~~a~~~~--~~E~~Hgp~~~i-~~~~~vi~i~~~g~~~~~~~~~~~~~~~ 328 (361)
.+.++++|.|.++.-.+-...-++... ..+....+ .+...+--...+ .+++++|+++-+|.|. +++...+.+++
T Consensus 196 i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~l~~e~TLfIViSKSGtT~-ETl~na~~ar~ 274 (605)
T 1t10_A 196 IYNIVNIGIGGSDLGPVMVTEALKPFSKRDLHCFFVSNVDGTHMAEVLKQVNLEETIFIIASKTFTTQ-ETLTNAMSARN 274 (605)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGSCSSSEEEEECCSSTHHHHHHHTTSCGGGEEEEEECSSSCCH-HHHHHHHHHHH
T ss_pred cceEEEEeccchHHHHHHHHHHhhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEEEEEeCCCCCh-hHHHHHHHHHH
Confidence 479999999999877665554444432 23333332 122112222234 3567777777788887 45544444332
Q ss_pred ----c-C-----------CcEEEEecCCCchhhhcc-c--ceEEcCCC
Q psy1915 329 ----R-D-----------GRPIVICEKGDTETQALA-T--KTLEVPHT 357 (361)
Q Consensus 329 ----~-g-----------~~~v~I~~~~~~~~~~~~-d--~~i~~p~~ 357 (361)
. | .++|+||+.+ +++.+.. | .++.+|..
T Consensus 275 ~l~~~~g~~~~~~~~~~~~h~VavTt~~-s~~~~~gi~~~~~F~~~d~ 321 (605)
T 1t10_A 275 ALMSYLKENGISTDGAVAKHFVALSTNT-EKVREFGIDTVNMFAFWDW 321 (605)
T ss_dssp HHHHHHHHTTCCCTTHHHHHEEEECSCH-HHHHHTTCCGGGEECCCTT
T ss_pred HHHHhcccccccccccccCEEEEEeCCc-hHHHHcCCCcccEEeeecc
Confidence 2 2 3678888776 5554443 3 47887753
No 92
>3ujh_A Glucose-6-phosphate isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: G6Q; 2.10A {Toxoplasma gondii}
Probab=90.10 E-value=0.36 Score=48.00 Aligned_cols=86 Identities=14% Similarity=0.079 Sum_probs=49.7
Q ss_pred CcEEEEeccccccccccchhhhhHHHHHHH---HHhcCCceEEEeccc---ccc-cCCCCCCCCEEEEEcCCCCcHHHHH
Q psy1915 76 SPLLVGIKTKTRLATDHIPILYGKATRQLL---EELTELPVMVELASD---FLD-RNTPVFRDDVCFFISQSGETADSLM 148 (361)
Q Consensus 76 ~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~---~~~~g~~~~~~~~~e---~~~-~~~~~~~~dlvI~iS~SG~t~e~~~ 148 (361)
.++++|+|+|..-. .+.... .+.+. ++..+..+.+....+ +.. ....-.+.+++|++|.||.|.|+..
T Consensus 153 ~vV~IGIGGS~LGp-~~v~eA----L~~~~~~~~~~~~~~~~FvsNvDp~~l~~~L~~L~~~~TlfiViSKSgtT~ET~~ 227 (567)
T 3ujh_A 153 NVISIGIGGSYLGT-EFVHLA----LAAEGYAAEKAHGRQIHFLANVDPVDVWLAERGFDPEETLVVVISKTFTTAETMM 227 (567)
T ss_dssp EEEEECCGGGTHHH-HHHHHH----HHTCHHHHHHTTTCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECSSSCCHHHHH
T ss_pred eEEEEecccchHHH-HHHHHH----hccccccccccCCCeEEEEeCCCHHHHHHHHhhCCcccEEEEEEeCCCCCHHHHH
Confidence 47899999997422 211111 11111 112355555543222 111 1122345678999999999999999
Q ss_pred HHHHHHH----cC--------CeEEEEEcC
Q psy1915 149 ALRYCKA----RG--------ALIVGVTNT 166 (361)
Q Consensus 149 a~~~ak~----~g--------~~~i~IT~~ 166 (361)
.++.+|+ +. -..|+||.+
T Consensus 228 n~~~~r~wl~~~~~~g~~~~~kh~vAvT~~ 257 (567)
T 3ujh_A 228 NARSVRDWYLHHYKGDERALGAHFCAVSTN 257 (567)
T ss_dssp HHHHHHHHHHHHTTTCGGGSGGGEEEECSC
T ss_pred HHHHHHHHHHHhccccchhhcCeEEEECCC
Confidence 9888773 21 258899875
No 93
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=89.66 E-value=10 Score=33.49 Aligned_cols=112 Identities=12% Similarity=0.068 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEE--Eecccc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMV--ELASDF 121 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~--~~~~e~ 121 (361)
.+.++...|..+...+. ...++ ++++++|.... +++.. +.+.. ..|..... +.+.-+
T Consensus 83 dL~kT~~~L~~A~~~i~-~~~~~--------~~iLfVgTk~~---aq~~V--------~~~A~-~~g~~yv~~RWlgG~L 141 (253)
T 3bch_A 83 NLKRTWEKLLLAARAIV-AIENP--------ADVSVISSRNT---GQRAV--------LKFAA-ATGATPIAGRFTPGTF 141 (253)
T ss_dssp CHHHHHHHHHHHHHHHH-TCSSG--------GGEEEEECSHH---HHHHH--------HHHHH-HHCCEEEESCCCTTTT
T ss_pred eHHHHHHHHHHHHHHHH-HHhCC--------CeEEEEeCCHH---HHHHH--------HHHHH-HhCCeeecceecCCcc
Confidence 67888888887777664 33333 56777765432 22221 22222 24543322 122222
Q ss_pred cc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 122 LD-RNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 122 ~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
.. ........|++|++...-+ -.+++.|+..|++||+|++. +++. ...|+.|+.+
T Consensus 142 TN~~~~~f~~PdlliV~Dp~~e----~~AI~EA~~lgIPvIalvDT-n~dp-~~VDy~IP~N 197 (253)
T 3bch_A 142 TNQIQAAFREPRLLVVTDPRAD----HQPLTEASYVNLPTIALCNT-DSPL-RYVDIAIPCN 197 (253)
T ss_dssp TCCSCSTTCSCSEEEESCTTTT----HHHHHHHHHTTCCEEEEECT-TCCC-TTCSEEEESC
T ss_pred cCccccccCCCCEEEEECCCcc----chHHHHHHHhCCCEEEEEcC-CCCc-ccCceEeecC
Confidence 11 1123456788888765333 45778888999999999976 5555 4678877764
No 94
>3qki_A Glucose-6-phosphate isomerase; structural genomics, structural genomics consortium, SGC; 1.92A {Plasmodium falciparum} PDB: 3pr3_A
Probab=89.65 E-value=1.1 Score=44.67 Aligned_cols=39 Identities=23% Similarity=0.336 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHH----c-C------CeEEEEEcCC
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKA----R-G------ALIVGVTNTV 167 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~----~-g------~~~i~IT~~~ 167 (361)
.+.+++|++|.||.|.|+...++.+|+ + | -..|+||.+.
T Consensus 240 ~~~TLfiViSKSgtT~ET~~n~~~~r~wl~~~~g~~~~~~kh~vAvT~~~ 289 (597)
T 3qki_A 240 QYDTLVIIISKTFTTAETMLNARSIKKWLSLKIKDDENLSKHMVAVSTNL 289 (597)
T ss_dssp GGGEEEEEECSSSCCHHHHHHHHHHHHHHTTTCCSHHHHGGGEEEECSCH
T ss_pred cccEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcccccCeEEEECCCh
Confidence 456789999999999999998888775 2 3 2588999753
No 95
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=89.16 E-value=7.4 Score=35.21 Aligned_cols=112 Identities=12% Similarity=0.077 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEEE--ecccc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMVE--LASDF 121 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~~--~~~e~ 121 (361)
.+.++...|..+...+. ...++ ++++++|.... +++.. ..+.. ..|...... .+.-+
T Consensus 50 dL~kT~~~L~~A~~~i~-~i~~~--------~~ILfVgTk~~---aq~~V--------~k~A~-~~g~~yv~~RWlgG~L 108 (295)
T 2zkq_b 50 NLKRTWEKLLLAARAIV-AIENP--------ADVSVISSRNT---GQRAV--------LKFAA-ATGATPIAGRFTPGTF 108 (295)
T ss_dssp CHHHHHHHHHHHHHHHH-HSSCG--------GGEEEEECSHH---HHHHH--------HHHHH-HHCCEEEESSCCCC-C
T ss_pred eHHHHHHHHHHHHHHHH-HHhCC--------CeEEEEeCcHH---HHHHH--------HHHHH-HhCCceecceEecccc
Confidence 68888888888877765 33333 56777765432 22221 22222 244432221 22222
Q ss_pred cc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 122 LD-RNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 122 ~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
.. ........|++|++...-+ ..+++.|+..|++||+|++. +|++ .+.|+.|+.+
T Consensus 109 TN~~t~~f~~PdlliV~Dp~~e----~~AI~EA~~lgIPvIalvDT-n~dp-~~VDy~IP~N 164 (295)
T 2zkq_b 109 TNQIQAAFREPRLLVVTDPRAD----HQPLTEASYVNLPTIALCNT-DSPL-RYVDIAIPCN 164 (295)
T ss_dssp CCTTCSSCCCCSEEEESCTTTT----HHHHHHHHHHTCCEEEEECT-TCCC-TTCSEEEESC
T ss_pred cCcccccccCCCeEEEeCCCcc----hhHHHHHHHhCCCEEEEecC-CCCc-ccCCEEEeCC
Confidence 11 1123456788888765433 46778888999999999976 5555 4678877764
No 96
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=88.70 E-value=11 Score=32.36 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEE--Eecccc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMV--ELASDF 121 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~--~~~~e~ 121 (361)
.++++.+.|..|...+... ..++++++|.... +++.. +.+.. ..|..... +.+.-+
T Consensus 48 dL~kT~~~L~~A~~~i~~i----------~~~~iLfVgTk~~---~~~~V--------~~~A~-~~g~~~v~~rwlgG~L 105 (208)
T 1vi6_A 48 DIRKLDERIRVAAKFLSRY----------EPSKILLVAARQY---AHKPV--------QMFSK-VVGSDYIVGRFIPGTL 105 (208)
T ss_dssp CHHHHHHHHHHHHHHHTTS----------CGGGEEEEECSGG---GHHHH--------HHHHH-HHCCEEEESSCCTTTT
T ss_pred cHHHHHHHHHHHHHHHHhc----------CCCEEEEEeCCHH---HHHHH--------HHHHH-HhCCeeecCEECCCcc
Confidence 6888889998888776432 2357788776433 22221 22222 24543322 122222
Q ss_pred cc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 122 LD-RNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 122 ~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
.. ........|++|++...-+ -.+++.|+..|++||++.+. +++.. ..|+.|+.+
T Consensus 106 TN~~~~~f~~PdlliV~Dp~~e----~~ai~EA~~l~IPvIalvDT-n~~p~-~Vd~~IP~N 161 (208)
T 1vi6_A 106 TNPMLSEYREPEVVFVNDPAID----KQAVSEATAVGIPVVALCDS-NNSSA-DVDLVIPTN 161 (208)
T ss_dssp TCTTSTTCCCCSEEEESCTTTT----HHHHHHHHHTTCCEEEEECT-TCCCT-TCSEEEESC
T ss_pred cChhhHhhCCCCEEEEECCCcc----hhHHHHHHHhCCCEEEEeCC-CCCcc-ccCEEEeCC
Confidence 11 1122345688888865433 35677788889999999976 66654 678887764
No 97
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=82.59 E-value=5.3 Score=35.11 Aligned_cols=112 Identities=8% Similarity=0.038 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceE-E--Eeccc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVM-V--ELASD 120 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~-~--~~~~e 120 (361)
.+.++...|..+...+.. ..++ ++++++|.... +++.. ..+.. ..|.... . ..+.-
T Consensus 45 dL~kT~~~L~~A~~~i~~-i~~~--------~~iLfVgtk~~---~~~~V--------~~~A~-~~g~~yv~~~RWlgG~ 103 (241)
T 2xzm_B 45 NIEETWQKIKLAARVIAA-VQHP--------EDVMVVCSRIY---GQRAA--------IKFAG-YTHCKSTSSSRWTPGT 103 (241)
T ss_dssp CHHHHHHHHHHHHHHHHH-CSSG--------GGEEEECCSHH---HHHHH--------HHHHH-HHTCBCCCCSSCCTTT
T ss_pred eHHHHHHHHHHHHHHHHH-HhCC--------CeEEEEECCHH---HHHHH--------HHHHH-HhCCEEeccccccCCc
Confidence 678888888888877653 3333 46666654322 22221 12222 2443322 1 12222
Q ss_pred ccc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 121 FLD-RNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 121 ~~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
+.. ........|++|++...- =-.+++.|+..|++||+|++. +|+.. ..|+.|+.+
T Consensus 104 LTN~~t~~~~~PdlliV~Dp~~----e~~ai~EA~~l~IPvIalvDT-n~~p~-~VDy~IP~N 160 (241)
T 2xzm_B 104 LTNYQTLKYEEPRVLIVTDPRS----DFQAIKEASYVNIPVIALCDS-DSPLA-YVDVVIPCN 160 (241)
T ss_dssp TTCTTCTTCCCCSEEEESCTTT----THHHHHHHTTTTCCEEECCCS-SSCCT-TCCEECCSC
T ss_pred ccCccccccCCCCEEEEECCCc----chHHHHHHHHhCCCEEEEecC-CCCcc-cccEEEeCC
Confidence 211 112334568888875442 235777888899999999976 56654 567766543
No 98
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=82.17 E-value=24 Score=31.03 Aligned_cols=113 Identities=9% Similarity=0.050 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEE--Eecccc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMV--ELASDF 121 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~--~~~~e~ 121 (361)
.+.++...|..+...+.. ..++ ++++++|.... +++.. ..+.. ..|..... ..+.-+
T Consensus 49 dL~kT~~~L~~A~~~i~~-i~~~--------~~vlfVgTk~~---~q~~V--------~k~A~-~~g~~~v~~rwlgGtL 107 (252)
T 3u5c_A 49 NVGKTWEKLVLAARIIAA-IPNP--------EDVVAISSRTF---GQRAV--------LKFAA-HTGATPIAGRFTPGSF 107 (252)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSSG--------GGEEEEECSHH---HHHHH--------HHHHH-HSSCEEEESCCCTTSS
T ss_pred cHHHHHHHHHHHHHHHHH-HhcC--------CEEEEEeCCcH---HHHHH--------HHHHH-HhCCceecCcccCCcc
Confidence 688888888888777542 2222 56777765432 22221 12222 35543322 122222
Q ss_pred cc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEccc
Q psy1915 122 LD-RNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINA 183 (361)
Q Consensus 122 ~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~ 183 (361)
.. ........|++|++...-+ ..+++.|+..|++||+|++. +|++. ..|+.|+.+.
T Consensus 108 TN~~t~~f~~PdllvV~Dp~~d----~~ai~EA~~l~IP~Ial~DT-n~~p~-~VD~~IP~Nd 164 (252)
T 3u5c_A 108 TNYITRSFKEPRLVIVTDPRSD----AQAIKEASYVNIPVIALTDL-DSPSE-FVDVAIPCNN 164 (252)
T ss_dssp SCTTSTTCCCCSEEEESCTTTT----HHHHHHHHTTTCCEEEEECT-TCCCT-TCSSEEECCT
T ss_pred cChhhhhccCCceEEEeCCccc----hHHHHHHHHcCCCEEEEEcC-CCCcc-cCCEEEeCCC
Confidence 11 1123456788888876543 45677788899999999976 56554 5788887643
No 99
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=80.42 E-value=33 Score=30.97 Aligned_cols=113 Identities=10% Similarity=0.108 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEE--Eecccc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMV--ELASDF 121 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~--~~~~e~ 121 (361)
.++++.+.|..+...+.. ..++ ++++++|.... +++.. ..+.. ..|..... ..+.-+
T Consensus 54 dL~kT~e~L~~Aa~~I~~-i~~~--------~~ILfVgTk~~---aq~aV--------~k~A~-~tG~~yV~~RWlgGtL 112 (305)
T 3iz6_A 54 NLGKTWEKLQLAARVIVA-IENP--------QDIIVQSARPY---GQRAV--------LKFAQ-YTGAHAIAGRHTPGTF 112 (305)
T ss_dssp CHHHHHHHHHHHHHHHHH-TTSS--------CCEEEECCSHH---HHHHH--------HHHHH-HHTCEEECSCCCTTTT
T ss_pred CHHHHHHHHHHHHHHHHH-HhCC--------CeEEEEeCcHH---HHHHH--------HHHHH-HhCCccccCcccCCcc
Confidence 588888898888777653 2233 56777764432 22221 12222 24433221 122222
Q ss_pred cc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEccc
Q psy1915 122 LD-RNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINA 183 (361)
Q Consensus 122 ~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~ 183 (361)
.. ........|++|++...-+ ..+++.|+..|++||+|++. +|++. +.|+.|+.+.
T Consensus 113 TN~~t~~f~ePdllvV~Dp~~d----~qAI~EA~~lnIPtIALvDT-nsdp~-~VDy~IP~ND 169 (305)
T 3iz6_A 113 TNQLQTSFSEPRLLILTDPRTD----HQPIKESALGNIPTIAFCDT-DSPMR-YVDIGIPANN 169 (305)
T ss_dssp TTTTTSCSSCCSEEEESCTTTT----HHHHHHHHHHTCCEEEEECT-TSCGG-GCSEEEESCC
T ss_pred cCcccccccCCceeEEeCcccc----hHHHHHHHHcCCCEEEEEcC-CCCcc-ccceEEeCCC
Confidence 11 1123456788888875443 45667788889999999976 56554 4788877643
No 100
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=79.76 E-value=3.7 Score=39.57 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhc-CCeEEEEeccCCHHHHHHHHHHHHHhhC----cceEEEec----CCccccCccCcc-CCCcEEEEEc
Q psy1915 242 SEVQQLAKEMYE-QKSMLLMGRGYNYATCMEGALKIKELTY----MHSEGIMA----GELKHGPLALID-NSMPVIMILT 311 (361)
Q Consensus 242 ~~~~~~a~~l~~-~~~i~~iG~G~~~~~A~e~alkl~E~~~----~~a~~~~~----~E~~Hgp~~~i~-~~~~vi~i~~ 311 (361)
+.++++++++.. .+.++.+|-|.++--++-...-++...+ -+-..|.+ +...+.-...++ +++.+++++-
T Consensus 63 ~~i~~~a~~vr~~~~~vV~IGIGGS~LGp~~v~eaL~~~~~~~~~~~~~~fv~dnvDp~~i~~~l~~l~~~~Tl~iViSK 142 (446)
T 3ff1_A 63 SRIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISK 142 (446)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCGGGTHHHHHHHHHHSCSSCCCCSSCEEEEESSSCCHHHHHHHHHHGGGCCEEEEEECS
T ss_pred HHHHHHHHHHhcCCCEEEEEecchhHHHHHHHHHHHcchhhcccCCceEEEEecCCCHHHHHHHHHhcCccceEEEEEcC
Confidence 446677777764 6789999999886444432222222111 01111211 122222223343 5577777777
Q ss_pred CCccHHHHHHHHHH----HHHc-C-----CcEEEEecCCCchhhhccc----ceEEcCCC
Q psy1915 312 RDPVYVKCMNALLQ----VIAR-D-----GRPIVICEKGDTETQALAT----KTLEVPHT 357 (361)
Q Consensus 312 ~g~~~~~~~~~~~~----~~~~-g-----~~~v~I~~~~~~~~~~~~d----~~i~~p~~ 357 (361)
+|.|.| ++...+. +.++ | .++|+||+.+++++.+.++ .++.+|..
T Consensus 143 SgtT~E-T~~n~~~~r~~l~~~~g~~~~~~h~vavT~~~~g~L~~~a~~~G~~~F~~~d~ 201 (446)
T 3ff1_A 143 SGTTTE-PAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDD 201 (446)
T ss_dssp SSCCHH-HHHHHHHHHHHHHHHHCHHHHHHHEEEEECSSCSHHHHHHHHHTCEEEECCTT
T ss_pred CCCCHH-HHHHHHHHHHHHHHhcCcccccceEEEEeCCCcchhhhHHHHcCCeEEEeccc
Confidence 888874 4433332 3222 3 3688888876565533332 35766653
No 101
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=79.29 E-value=28 Score=29.54 Aligned_cols=111 Identities=18% Similarity=0.143 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccccccccccchhhhhHHHHHHHHHhcCCceEE--Eecccc
Q psy1915 44 HLARHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTKTRLATDHIPILYGKATRQLLEELTELPVMV--ELASDF 121 (361)
Q Consensus 44 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S~~~a~~~~~~~~~~~a~~~~~~~~g~~~~~--~~~~e~ 121 (361)
.++++.+.|..+...+.. . + .+.++++|.... +++.. ..+.. ..|..... +.+.-+
T Consensus 44 dL~kT~~~L~~A~~~i~~-~-~--------~~~ilfV~tk~~---~~~~V--------~k~A~-~~g~~~v~~rw~gG~l 101 (202)
T 3j20_B 44 DVRKTDERLKVAGKFLAK-F-E--------PQSILAVSVRLY---GQKPV--------KKFGE-VTGARAIPGRFLPGTM 101 (202)
T ss_dssp CHHHHHHHHHHHHHHHHH-S-C--------SSCEEEECCCTT---THHHH--------HHHHH-HHSCCCCCSSCCSSSS
T ss_pred CHHHHHHHHHHHHHHHHh-h-C--------CCeEEEEecChH---HHHHH--------HHHHH-HHCCceeCceecCCCc
Confidence 578888888887776542 1 2 257777766543 22222 22222 23432211 122222
Q ss_pred cc-cCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 122 LD-RNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 122 ~~-~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
.. ........|++|++...-+ ..+++.|+..|.+||++++. +|++. ..|+.|+.+
T Consensus 102 TN~~~~~~~~Pdllvv~Dp~~d----~~ai~EA~~l~IP~Ial~DT-n~~p~-~Vd~~IP~N 157 (202)
T 3j20_B 102 TNPAVKNFFEPDVLIVTDPRAD----HQAMREAVEIGIPIVALVDT-ENLLS-YVDLAIPTN 157 (202)
T ss_dssp SCSSSSSCCCCSEEEESCTTTS----HHHHHHHHHHTCCEEEEECT-TCCCT-TCCEEEECC
T ss_pred ccHhHHhccCCCeEEEeCCccc----hHHHHHHHHcCCCEEEEEcC-CCCcc-ccCEEEeCC
Confidence 11 1122346688888865433 45677788889999999976 56554 478877654
No 102
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=73.42 E-value=51 Score=31.56 Aligned_cols=29 Identities=3% Similarity=-0.091 Sum_probs=20.6
Q ss_pred CEEEEEcCCCCcHHHHHHHHHHHHcCCeEEE
Q psy1915 132 DVCFFISQSGETADSLMALRYCKARGALIVG 162 (361)
Q Consensus 132 dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~ 162 (361)
|++|+ ..|....-....+.|+++|+++-.
T Consensus 74 ~lVi~--at~~~~~n~~i~~~a~~~~i~vn~ 102 (457)
T 1pjq_A 74 WLAIA--ATDDDTVNQRVSDAAESRRIFCNV 102 (457)
T ss_dssp SEEEE--CCSCHHHHHHHHHHHHHTTCEEEE
T ss_pred cEEEE--cCCCHHHHHHHHHHHHHcCCEEEE
Confidence 44444 667776677888899999998533
No 103
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=69.81 E-value=8.1 Score=35.60 Aligned_cols=39 Identities=15% Similarity=0.052 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEccc
Q psy1915 145 DSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINA 183 (361)
Q Consensus 145 e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~ 183 (361)
.-..++..||+.|.+++++..++++|-.++||..+.++.
T Consensus 12 ~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~ 50 (363)
T 4ffl_A 12 QGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDV 50 (363)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCC
Confidence 446778899999999999999999999999998776653
No 104
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=62.54 E-value=33 Score=34.90 Aligned_cols=55 Identities=13% Similarity=0.213 Sum_probs=34.2
Q ss_pred CcEEEEEcCCcc--HHHHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 304 MPVIMILTRDPV--YVKCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 304 ~~vi~i~~~g~~--~~~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
.-+|++.+.+.. .......+.+.+++|+++|+|.... ++.++.+|..+.+.++.|
T Consensus 167 ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr~-t~ta~~Ad~~l~irPGtD 223 (715)
T 2iv2_X 167 TDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRK-IETARIADMHIALKNGSN 223 (715)
T ss_dssp CSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSSC-CHHHHTCSEEECCCTTCH
T ss_pred CCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCCC-CchhHhhCEEeccCCCcH
Confidence 334444544432 2233455666777899988887655 456677898888876554
No 105
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=60.49 E-value=24 Score=35.87 Aligned_cols=140 Identities=15% Similarity=0.130 Sum_probs=74.0
Q ss_pred CCCCCEEEEEcCC--CCcHHHHHHHHHHHHc--CCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHH
Q psy1915 128 VFRDDVCFFISQS--GETADSLMALRYCKAR--GALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLV 203 (361)
Q Consensus 128 ~~~~dlvI~iS~S--G~t~e~~~a~~~ak~~--g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~ 203 (361)
+..-|++|.+-.. ...+.....+..|+++ |+++|.|-.. .++.++.||..|.+..|.+. .+ ++.
T Consensus 164 ~~~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~-~t~ta~~Ad~~l~irPGtD~------al-----~~a 231 (723)
T 2nap_A 164 IDQATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPR-RTNTSRIADMHVAFRPGTDL------AF-----MHS 231 (723)
T ss_dssp GGTCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSB-CCGGGGGCSEEECCCTTTHH------HH-----HHH
T ss_pred HhHCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCc-CCchhhhhCeeeecCCCcHH------HH-----HHH
Confidence 3455777666432 1123445566778888 9999988765 67889999998887654321 11 111
Q ss_pred HHHHHHhhhhcchHH----------------HHHHHHHHHHHH-HHHHHHHHc-ccHHHHHHHHHHhcCCe-EEEEeccC
Q psy1915 204 MFALVMCEDRISLQT----------------RRNEIIKGLKVI-HEQIREVLQ-MDSEVQQLAKEMYEQKS-MLLMGRGY 264 (361)
Q Consensus 204 ~l~~~~~~~~~~~~~----------------~~~~~~~~l~~l-~~~~~~~l~-~~~~~~~~a~~l~~~~~-i~~iG~G~ 264 (361)
++-..+.....+ .+ -++++.+.+... |+.+.++-. ..+.++++|+.+...++ +++.|.|.
T Consensus 232 l~~~ii~~~l~D-~~fl~~~tn~~~g~~~~~gf~~l~~~~~~~tpe~~a~itGv~~~~i~~~A~~~a~a~~~~i~~g~g~ 310 (723)
T 2nap_A 232 MAWVIINEELDN-PRFWQRYVNFMDAEGKPSDFEGYKAFLENYRPEKVAEICRVPVEQIYGAARAFAESAATMSLWCMGI 310 (723)
T ss_dssp HHHHHHHTTCSC-HHHHHHHEEEECTTSCEECHHHHHHHHGGGCHHHHHHHHTSCHHHHHHHHHHHHHSSSEEEEECTTT
T ss_pred HHHHHHHcCCcc-HHHHHHhhccccccccCcHHHHHHHHHhcCCHHHHHHHHCcCHHHHHHHHHHHHhCCCeEEEecccc
Confidence 111111111000 00 022223222222 444444433 34678999999987654 66678875
Q ss_pred C----HHHHHHHHHHHHHhh
Q psy1915 265 N----YATCMEGALKIKELT 280 (361)
Q Consensus 265 ~----~~~A~e~alkl~E~~ 280 (361)
. ......+...|.-++
T Consensus 311 ~~~~~g~~~~~a~~~L~~l~ 330 (723)
T 2nap_A 311 NQRVQGVFANNLIHNLHLIT 330 (723)
T ss_dssp SSSTTHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHh
Confidence 3 233334444454444
No 106
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=60.02 E-value=12 Score=38.27 Aligned_cols=55 Identities=16% Similarity=0.150 Sum_probs=39.0
Q ss_pred CCCCEEEEEcCC--CCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccC
Q psy1915 129 FRDDVCFFISQS--GETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAG 184 (361)
Q Consensus 129 ~~~dlvI~iS~S--G~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~ 184 (361)
..-|++|.+-.. .+.+.....++.++++|+++|.|-.. .++.++.||..|.+..|
T Consensus 165 ~~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~irPG 221 (715)
T 2iv2_X 165 DNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPR-KIETARIADMHIALKNG 221 (715)
T ss_dssp GGCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSS-CCHHHHTCSEEECCCTT
T ss_pred hcCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCC-CCchhHhhCEEeccCCC
Confidence 345677666432 12234556777889999999988755 68889999999888654
No 107
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=58.79 E-value=47 Score=33.69 Aligned_cols=55 Identities=13% Similarity=0.085 Sum_probs=32.6
Q ss_pred CcEEEEEcCCcc--HHHHHHHHHHHHHc--CCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 304 MPVIMILTRDPV--YVKCMNALLQVIAR--DGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 304 ~~vi~i~~~g~~--~~~~~~~~~~~~~~--g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
.-+|++.+.+.. .......+.+.+++ |+++|+|.... ++.++.+|..+.+.+..|
T Consensus 167 ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~~-t~ta~~Ad~~l~irPGtD 225 (723)
T 2nap_A 167 ATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPRR-TNTSRIADMHVAFRPGTD 225 (723)
T ss_dssp CSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSBC-CGGGGGCSEEECCCTTTH
T ss_pred CCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCcC-CchhhhhCeeeecCCCcH
Confidence 334444444432 22333445566666 88888776654 456677898888766544
No 108
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=58.17 E-value=28 Score=30.27 Aligned_cols=47 Identities=23% Similarity=0.320 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 130 RDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 130 ~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
..|++|++...-+ -.|++.|+..|+|||+|.+. +++.. ..|+.|+.+
T Consensus 157 ~Pdll~v~Dp~~e----~~ai~EA~~l~IPvIaivDT-n~dp~-~Vdy~IP~N 203 (231)
T 3bbn_B 157 LPDIVIIVDQQEE----YTALRECITLGIPTICLIDT-NCNPD-LADISIPAN 203 (231)
T ss_dssp CCSEEEESCTTTT----HHHHHHHHTTTCCEEECCCS-SSCCS-SCSEECCCC
T ss_pred CCCEEEEeCCccc----cHHHHHHHHhCCCEEEEecC-CCCcc-ceeEEeeCC
Confidence 5688887765433 36778889999999999976 55543 567766543
No 109
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=57.87 E-value=8.1 Score=39.53 Aligned_cols=124 Identities=11% Similarity=0.155 Sum_probs=67.7
Q ss_pred CCCCCEEEEEc-CCCCc-H-HHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHH
Q psy1915 128 VFRDDVCFFIS-QSGET-A-DSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVM 204 (361)
Q Consensus 128 ~~~~dlvI~iS-~SG~t-~-e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~ 204 (361)
+..-|++|.+- ...++ + -....++.|+++|+++|.|-.. .++.++.||..|.+..|.+. .+ ++.+
T Consensus 158 ~~~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~irPGtD~------al-----~~a~ 225 (727)
T 2e7z_A 158 FADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPR-RTKVAEMADIWLPLRYGTDA------AL-----FLGM 225 (727)
T ss_dssp TTTCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSS-CCHHHHHCSEEECCCTTCHH------HH-----HHHH
T ss_pred cccCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCC-CCcchhhcceeecCCCCcHH------HH-----HHHH
Confidence 44556666553 33333 3 5667788889999999988765 68889999999887654321 11 1111
Q ss_pred HHHHHhhhhcchHHH-------HHHHHHHHHH-HHHHHHHHHc-ccHHHHHHHHHHhcCCe-EEEEeccC
Q psy1915 205 FALVMCEDRISLQTR-------RNEIIKGLKV-IHEQIREVLQ-MDSEVQQLAKEMYEQKS-MLLMGRGY 264 (361)
Q Consensus 205 l~~~~~~~~~~~~~~-------~~~~~~~l~~-l~~~~~~~l~-~~~~~~~~a~~l~~~~~-i~~iG~G~ 264 (361)
+-..+.....+ .+. ++++.+.+.. -|+.+.++.. ..+.++++|+.+...++ +++.|.|.
T Consensus 226 ~~~ii~~~l~d-~~fv~~~t~gf~~l~~~v~~~tpe~~a~itGv~~~~I~~~A~~~a~a~~~~i~~g~g~ 294 (727)
T 2e7z_A 226 INVIINEQLYD-KEFVENWCVGFEELKERVQEYPLDKVAEITGCDAGEIRKAAVMFATESPASIPWAVST 294 (727)
T ss_dssp HHHHHHTTCSC-HHHHHHHEECHHHHHHHHTTCCHHHHHHHHCCCHHHHHHHHHHHHHSSSEECCCCSGG
T ss_pred HHHHHHCCccc-HHHHHHHhHHHHHHHHHHhcCCHHHHHHHHCcCHHHHHHHHHHHHhCCCeEEEeCchh
Confidence 11111111111 111 2223332221 1344444433 34678999999987554 55557763
No 110
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=57.55 E-value=11 Score=38.91 Aligned_cols=138 Identities=19% Similarity=0.186 Sum_probs=73.0
Q ss_pred CCCEEEEEc-CCCCcH--HHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHH
Q psy1915 130 RDDVCFFIS-QSGETA--DSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFA 206 (361)
Q Consensus 130 ~~dlvI~iS-~SG~t~--e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~ 206 (361)
.-|++|.+- ...++. .....++.++++|+++|.|-.. .++.++.||..|.+..|.+. .+ ++.++-
T Consensus 199 ~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr-~t~ta~~Ad~~l~irPGtD~------al-----~~al~~ 266 (765)
T 2vpz_A 199 NARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPR-FSTAAAKAHRWLPIKPGTDT------AL-----LLAWIH 266 (765)
T ss_dssp GCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSB-CCTTGGGCSEEECCCTTCHH------HH-----HHHHHH
T ss_pred cCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCC-CCcchhhCCeEeCCCCCcHH------HH-----HHHHHH
Confidence 445555553 333332 5667788889999999988765 68889999999988654321 11 111111
Q ss_pred HHHhhhhcchHHH-------HHHHHHHHHH-HHHHHHHHHc-ccHHHHHHHHHHh-cCC-eEEEEeccCC----HHHHHH
Q psy1915 207 LVMCEDRISLQTR-------RNEIIKGLKV-IHEQIREVLQ-MDSEVQQLAKEMY-EQK-SMLLMGRGYN----YATCME 271 (361)
Q Consensus 207 ~~~~~~~~~~~~~-------~~~~~~~l~~-l~~~~~~~l~-~~~~~~~~a~~l~-~~~-~i~~iG~G~~----~~~A~e 271 (361)
..+.....+ .+. ++++.+.+.. -|+.+.++-. ..+.++++|+.+. ..+ .+++.|.|.. ......
T Consensus 267 ~ii~~~l~D-~~fi~~~t~gf~~l~~~v~~~tpe~~a~itGv~~~~I~~lA~~~a~~a~~~~i~~g~g~~~~~~g~~~~~ 345 (765)
T 2vpz_A 267 VLIYEDLYD-KEYVAKYTVGFEELKAHVKDFTPEWAEKHTEIPAQVIREVAREMAAHKPRAVLPPTRHNVWYGDDTYRVM 345 (765)
T ss_dssp HHHHTTCSC-HHHHHHHEECCHHHHHHTSSCCHHHHHHHHCSCHHHHHHHHHHHHTTTTSEECCCCSCCCSSTTTHHHHH
T ss_pred HHHHcCCcC-HHHHHHHccHHHHHHHHhhcCCHHHHHHHHCcCHHHHHHHHHHHHhhCCCEEEEcccccccccchHHHHH
Confidence 111111111 111 1222222221 1444444433 3467899999998 555 4555687743 233334
Q ss_pred HHHHHHHhh
Q psy1915 272 GALKIKELT 280 (361)
Q Consensus 272 ~alkl~E~~ 280 (361)
+...|.-++
T Consensus 346 a~~~L~~l~ 354 (765)
T 2vpz_A 346 ALLYVNVLL 354 (765)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 444454444
No 111
>1eu1_A Dimethyl sulfoxide reductase; molybdenum, molybdenum cofactor, DMSO, molybdopte oxidoreductase; HET: GLC MGD EPE; 1.30A {Rhodobacter sphaeroides} SCOP: b.52.2.2 c.81.1.1 PDB: 4dmr_A* 1dmr_A* 1e5v_A* 1h5n_A* 2dmr_A* 3dmr_A* 1e61_A* 1e60_A* 1e18_A* 1dms_A*
Probab=57.38 E-value=14 Score=38.18 Aligned_cols=122 Identities=12% Similarity=0.121 Sum_probs=65.8
Q ss_pred HHHHHHHHHHcCCeEEEEEcCCCCcccccc-CeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHH-----
Q psy1915 146 SLMALRYCKARGALIVGVTNTVGSSISRES-HCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTR----- 219 (361)
Q Consensus 146 ~~~a~~~ak~~g~~~i~IT~~~~S~la~~a-d~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~----- 219 (361)
....++.+|++|+++|.|-.. .++.++.+ |..|.+..|.+. .+. +.++-..+.....+ .+.
T Consensus 203 ~~~~l~~a~~~G~klivIDPr-~t~ta~~aad~~l~irPGtD~------AL~-----~am~~~ii~e~l~D-~~fi~~~t 269 (780)
T 1eu1_A 203 AYAGMKALKEKGTRVIAINPV-RTETADYFGADVVSPRPQTDV------ALM-----LGMAHTLYSEDLHD-KDFLENCT 269 (780)
T ss_dssp HHHHHHHHHHHTCEEEEESSB-CCHHHHHHTCEEECCCTTCHH------HHH-----HHHHHHHHHTTCSC-HHHHHHHE
T ss_pred hHHHHHHHHHCCCeEEEECCC-CCCcccccCCEEeeeCCCCHH------HHH-----HHHHHHHHHCCCcc-HHHHHHhh
Confidence 345677888899999988765 56777776 999888654331 111 11111111111111 111
Q ss_pred --HHHHHHHHH-------HHHHHHHHHHc-ccHHHHHHHHHHhcCCeEEEEeccCC----HHHHHHHHHHHHHhh
Q psy1915 220 --RNEIIKGLK-------VIHEQIREVLQ-MDSEVQQLAKEMYEQKSMLLMGRGYN----YATCMEGALKIKELT 280 (361)
Q Consensus 220 --~~~~~~~l~-------~l~~~~~~~l~-~~~~~~~~a~~l~~~~~i~~iG~G~~----~~~A~e~alkl~E~~ 280 (361)
++++.+.+. .-|+.+.++-. ..+.++++|+.+...+.+++.|.|.. -.....+...|.-++
T Consensus 270 ~Gfe~~~~~v~~~~dg~~~tpe~aa~itGv~~~~I~~~A~~~a~~~~~i~~g~g~~~~~~g~~~~~ai~~L~~lt 344 (780)
T 1eu1_A 270 TGFDLFAAYLTGESDGTPKTAEWAAEICGLPAEQIRELARSFVAGRTMLAAGWSIQRMHHGEQAHWMLVTLASMI 344 (780)
T ss_dssp ECHHHHHHHHTTTTTSCCCCHHHHHHHHCSCHHHHHHHHHHHHSSCEEEEECSGGGSSTTTHHHHHHHHHHHHHH
T ss_pred hcHHHHHHHhcCCcCCCcCCHHHHHHHHCcCHHHHHHHHHHHHhcCCEEEeechHhHHhhhHHHHHHHHHHHHHh
Confidence 222333222 11444444433 35678999999998887777888742 222334444455444
No 112
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=54.83 E-value=1.4e+02 Score=31.42 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=37.0
Q ss_pred CCCEEEEEc-CCCCc-HHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCC
Q psy1915 130 RDDVCFFIS-QSGET-ADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGP 185 (361)
Q Consensus 130 ~~dlvI~iS-~SG~t-~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~ 185 (361)
.-|++|.+- +..+| +-....+..||++|+++|.|--+ -|..++.||..|.+..|.
T Consensus 246 nad~Il~~G~N~~~~~p~~~~~~~~ar~~GakvivVDPr-~t~ta~~AD~wl~irPGT 302 (976)
T 2ivf_A 246 DAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPD-FNPTTPAADLHVPVRVGS 302 (976)
T ss_dssp GCSEEEEESCCHHHHCTTTHHHHHHHHHHTCEEEEECSS-CCTTGGGCSEEECCCTTC
T ss_pred hCcEEEEeCCChhHcccHHHHHHHHHHHcCCEEEEECCC-CCcchhhcCeEeccCCCc
Confidence 446666653 22111 12345567788899999999765 677889999999886653
No 113
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=50.83 E-value=1.4e+02 Score=26.87 Aligned_cols=90 Identities=11% Similarity=0.117 Sum_probs=53.7
Q ss_pred HhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCcc-----CCCcEEEEEcCCccHHHHHHHHHH
Q psy1915 251 MYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALID-----NSMPVIMILTRDPVYVKCMNALLQ 325 (361)
Q Consensus 251 l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~-----~~~~vi~i~~~g~~~~~~~~~~~~ 325 (361)
+.+...+.|+|+.. .+++.-+|+-+.++. .+...-|.-|.+-... .-.++|++.+.. ...+++|
T Consensus 72 i~~~~~ILfVgTk~---~aq~aV~k~A~~tG~---~yV~~RWlgGtLTN~~t~~f~ePdllvV~Dp~~-----d~qAI~E 140 (305)
T 3iz6_A 72 IENPQDIIVQSARP---YGQRAVLKFAQYTGA---HAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT-----DHQPIKE 140 (305)
T ss_dssp TTSSCCEEEECCSH---HHHHHHHHHHHHHTC---EEECSCCCTTTTTTTTTSCSSCCSEEEESCTTT-----THHHHHH
T ss_pred HhCCCeEEEEeCcH---HHHHHHHHHHHHhCC---ccccCcccCCcccCcccccccCCceeEEeCccc-----chHHHHH
Confidence 44556788888643 467777788877763 3555666666443221 223444433222 1346788
Q ss_pred HHHcCCcEEEEecCCCchhhhcccceEE
Q psy1915 326 VIARDGRPIVICEKGDTETQALATKTLE 353 (361)
Q Consensus 326 ~~~~g~~~v~I~~~~~~~~~~~~d~~i~ 353 (361)
+...|.++|++++.... + ++.|+.|-
T Consensus 141 A~~lnIPtIALvDTnsd-p-~~VDy~IP 166 (305)
T 3iz6_A 141 SALGNIPTIAFCDTDSP-M-RYVDIGIP 166 (305)
T ss_dssp HHHHTCCEEEEECTTSC-G-GGCSEEEE
T ss_pred HHHcCCCEEEEEcCCCC-c-cccceEEe
Confidence 88899999999987533 2 23455543
No 114
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=50.24 E-value=1e+02 Score=26.16 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=50.9
Q ss_pred cCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCcc-----CCCcEEEEEcCCccHHHHHHHHHHHH
Q psy1915 253 EQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALID-----NSMPVIMILTRDPVYVKCMNALLQVI 327 (361)
Q Consensus 253 ~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~-----~~~~vi~i~~~g~~~~~~~~~~~~~~ 327 (361)
+...+.|+|.-.. +++.-.++-+.++. .|...-|.-|.+-.+. .-.++|++.+..+ ..+++|+.
T Consensus 67 ~~~~iLfVgTk~~---~~~~V~~~A~~~g~---~~v~~rwlgG~LTN~~~~~f~~PdlliV~Dp~~e-----~~ai~EA~ 135 (208)
T 1vi6_A 67 EPSKILLVAARQY---AHKPVQMFSKVVGS---DYIVGRFIPGTLTNPMLSEYREPEVVFVNDPAID-----KQAVSEAT 135 (208)
T ss_dssp CGGGEEEEECSGG---GHHHHHHHHHHHCC---EEEESSCCTTTTTCTTSTTCCCCSEEEESCTTTT-----HHHHHHHH
T ss_pred CCCEEEEEeCCHH---HHHHHHHHHHHhCC---eeecCEECCCcccChhhHhhCCCCEEEEECCCcc-----hhHHHHHH
Confidence 4567888897543 45566666666653 3445566666443221 2234444332221 34788888
Q ss_pred HcCCcEEEEecCCCchhhhcccceE
Q psy1915 328 ARDGRPIVICEKGDTETQALATKTL 352 (361)
Q Consensus 328 ~~g~~~v~I~~~~~~~~~~~~d~~i 352 (361)
..|.++|++.+.... + +..|+.|
T Consensus 136 ~l~IPvIalvDTn~~-p-~~Vd~~I 158 (208)
T 1vi6_A 136 AVGIPVVALCDSNNS-S-ADVDLVI 158 (208)
T ss_dssp HTTCCEEEEECTTCC-C-TTCSEEE
T ss_pred HhCCCEEEEeCCCCC-c-cccCEEE
Confidence 999999999986532 2 2345554
No 115
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=50.15 E-value=20 Score=30.84 Aligned_cols=47 Identities=17% Similarity=0.141 Sum_probs=32.4
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHI 181 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 181 (361)
...|++|++.. ..=..+++.|+..|.+||+|++. +++. ...|+.|+.
T Consensus 148 ~~Pdllvv~Dp----~~e~~ai~Ea~~l~IP~IalvDT-n~~p-~~Vdy~IP~ 194 (218)
T 3r8n_B 148 GLPDALFVIDA----DHEHIAIKEANNLGIPVFAIVDT-NSDP-DGVDFVIPG 194 (218)
T ss_dssp SCCCSCEEEET----GGGHHHHHHHHHHTCCCEEECCS-SSCC-SSCSEECCS
T ss_pred cCCCeEEecCc----ccccHHHHHHHHhCCCEEEEEeC-cCCC-cccceEeec
Confidence 35678888754 33345677788889999999976 4554 456776654
No 116
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=48.87 E-value=1.7e+02 Score=30.81 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=37.8
Q ss_pred CCCCEEEEEcCC-CCc-HHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcccCC
Q psy1915 129 FRDDVCFFISQS-GET-ADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGP 185 (361)
Q Consensus 129 ~~~dlvI~iS~S-G~t-~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~ 185 (361)
..-|++|.+-.. .++ +-....+..|+++|+++|.|--+ -|..++.||..|.+..|.
T Consensus 183 ~~ad~il~~G~N~~~~~p~~~~~~~~a~~~G~klivIDPr-~t~ta~~AD~~l~irPGT 240 (977)
T 1h0h_A 183 KNSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPR-YTRTSTKCDLYAPLRSGS 240 (977)
T ss_dssp GGCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSS-CCTTGGGCSEEECCCTTC
T ss_pred hhCCEEEEECCChHHhCcHHHHHHHHHHHCCCeEEEECCC-CCchhHHhCeeeccCCCc
Confidence 345677666432 111 22345567788899999988765 678899999988886553
No 117
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=48.78 E-value=8.4 Score=33.39 Aligned_cols=46 Identities=11% Similarity=0.015 Sum_probs=31.5
Q ss_pred cCCceEEEecccc--cccCCCCCCCCEEEEEcCCCCcHHHHHHHHHHH
Q psy1915 109 TELPVMVELASDF--LDRNTPVFRDDVCFFISQSGETADSLMALRYCK 154 (361)
Q Consensus 109 ~g~~~~~~~~~e~--~~~~~~~~~~dlvI~iS~SG~t~e~~~a~~~ak 154 (361)
.|+++.+.+..+. .+.++.++.+++.|+||.+|.++-+-..++.-=
T Consensus 114 ~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~i 161 (223)
T 3dfz_A 114 NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDL 161 (223)
T ss_dssp TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHH
Confidence 6888887765443 134556778999999999999999877776543
No 118
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=47.12 E-value=21 Score=30.18 Aligned_cols=38 Identities=11% Similarity=0.037 Sum_probs=32.8
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCc
Q psy1915 133 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSS 170 (361)
Q Consensus 133 lvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~ 170 (361)
+..+-..||+|+++++++.....+|.+++.+|...+..
T Consensus 24 fiyG~MgsGKTt~Ll~~i~n~~~~~~kvl~~kp~~D~R 61 (195)
T 1w4r_A 24 VILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR 61 (195)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEETTCCC
T ss_pred EEECCCCCcHHHHHHHHHHHHHHcCCeEEEEccccCcc
Confidence 45677799999999999999999999999999775554
No 119
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=46.33 E-value=58 Score=29.22 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=42.2
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccc-cccCeeEEc
Q psy1915 128 VFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSIS-RESHCGIHI 181 (361)
Q Consensus 128 ~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la-~~ad~~l~~ 181 (361)
+.+-|++|++-.|+...-.....+.|+++|+++|.|--. .+++. ..+|+.|.-
T Consensus 214 ~~~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~-~t~~~~~~~d~~i~g 267 (290)
T 3u31_A 214 IAKCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINIS-KTYITNKMSDYHVCA 267 (290)
T ss_dssp HHHCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESS-CCTTTTTTCSEEEES
T ss_pred HhcCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCC-CCCCCCccceEEEEC
Confidence 346799999999999999999999999999998776544 46665 357777654
No 120
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=45.97 E-value=94 Score=23.44 Aligned_cols=95 Identities=11% Similarity=0.101 Sum_probs=53.1
Q ss_pred HHHHHHHhc-CCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEec-CCccccCccCcc--CC-CcEEEEEcCCccHHHH
Q psy1915 245 QQLAKEMYE-QKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMA-GELKHGPLALID--NS-MPVIMILTRDPVYVKC 319 (361)
Q Consensus 245 ~~~a~~l~~-~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~-~E~~Hgp~~~i~--~~-~~vi~i~~~g~~~~~~ 319 (361)
+++..+++. .-+++++=+.-..---. -.|.=.|..++.....+. ++|+.+.-++|. |. .+|+++..++. +-+
T Consensus 16 keivreikrqgvrvvllysdqdekrrr-erleefekqgvdvrtvedkedfrenireiwerypqldvvvivttddk--ewi 92 (162)
T 2l82_A 16 KEIVREIKRQGVRVVLLYSDQDEKRRR-ERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDK--EWI 92 (162)
T ss_dssp HHHHHHHHHTTCEEEEEECCSCHHHHH-HHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEEECCCH--HHH
T ss_pred HHHHHHHHhCCeEEEEEecCchHHHHH-HHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEEecCcH--HHH
Confidence 444444443 34555555554432222 233333444555544443 456655444443 33 34444444443 457
Q ss_pred HHHHHHHHHcCCcEEEEecCCCc
Q psy1915 320 MNALLQVIARDGRPIVICEKGDT 342 (361)
Q Consensus 320 ~~~~~~~~~~g~~~v~I~~~~~~ 342 (361)
.+.+++++.+|..+.++.+++|.
T Consensus 93 kdfieeakergvevfvvynnkdd 115 (162)
T 2l82_A 93 KDFIEEAKERGVEVFVVYNNKDD 115 (162)
T ss_dssp HHHHHHHHHTTCEEEEEEECSCH
T ss_pred HHHHHHHHhcCcEEEEEecCCCc
Confidence 78899999999999999988765
No 121
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=45.73 E-value=52 Score=33.94 Aligned_cols=31 Identities=6% Similarity=-0.086 Sum_probs=22.4
Q ss_pred HcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 328 ARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 328 ~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
++|.++|+|.... +++++.+|..+.+.+..|
T Consensus 443 ~~g~klividPr~-t~ta~~Ad~~l~i~PGtD 473 (783)
T 3i9v_3 443 RRTDKMALFAPYR-APLMKWAAIHEVHRPGEE 473 (783)
T ss_dssp CCTTSEEEEESSC-CGGGTTCSEEEECCSSCH
T ss_pred cCCCEEEEEeCCc-chhhHhhcceEecCCCcH
Confidence 4577888777655 467778999988877654
No 122
>1ti6_A Pyrogallol hydroxytransferase large subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.52.2.2 c.81.1.1 PDB: 1ti2_A* 1ti4_A* 1vld_M* 1vle_M* 1vlf_M*
Probab=45.34 E-value=33 Score=35.79 Aligned_cols=31 Identities=16% Similarity=0.025 Sum_probs=25.1
Q ss_pred HHHcCCeEEEEEcCCCCccccc-cCeeEEcccC
Q psy1915 153 CKARGALIVGVTNTVGSSISRE-SHCGIHINAG 184 (361)
Q Consensus 153 ak~~g~~~i~IT~~~~S~la~~-ad~~l~~~~~ 184 (361)
||++|+++|.|--+ .++.++. ||..|.+..|
T Consensus 238 a~~~G~klivIDPr-~t~ta~~~Ad~~l~irPG 269 (875)
T 1ti6_A 238 LKDLGVDFVFIDPH-MNHTARLVADKWFSPKIG 269 (875)
T ss_dssp HHHTTCEEEEECSB-CCHHHHHHCSEEECCCTT
T ss_pred HHHcCCeEEEECCC-CCCcccccCCEEeccCCC
Confidence 88899999998765 5777776 7999988655
No 123
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=44.81 E-value=20 Score=29.17 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=38.3
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHHc-CCeEEEEEcC--CCCccccccCeeEEcc
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKAR-GALIVGVTNT--VGSSISRESHCGIHIN 182 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~~-g~~~i~IT~~--~~S~la~~ad~~l~~~ 182 (361)
..-|.++.+|.-| +-..+++.+|++ |.+|+++.-. ....|.+.||..+.+.
T Consensus 107 ~~~d~~vLvSgD~---DF~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad~fi~l~ 160 (165)
T 2qip_A 107 PDVDRVILVSGDG---DFSLLVERIQQRYNKKVTVYGVPRLTSQTLIDCADNFVAID 160 (165)
T ss_dssp GGCSEEEEECCCG---GGHHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSSEEEECS
T ss_pred ccCCEEEEEECCh---hHHHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCCEEEecc
Confidence 3457888887765 777888889996 9999988743 2345888999877764
No 124
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=44.62 E-value=1.4e+02 Score=25.14 Aligned_cols=78 Identities=14% Similarity=0.147 Sum_probs=47.6
Q ss_pred cCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCcc-----CCCcEEEEEcCCccHHHHHHHHHHHH
Q psy1915 253 EQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALID-----NSMPVIMILTRDPVYVKCMNALLQVI 327 (361)
Q Consensus 253 ~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~-----~~~~vi~i~~~g~~~~~~~~~~~~~~ 327 (361)
+...+.|+|+... +++.-+|+-+.++.+ +...-|.-|.+-... .-.++|++.+..+ ..++.|+.
T Consensus 63 ~~~~ilfV~tk~~---~~~~V~k~A~~~g~~---~v~~rw~gG~lTN~~~~~~~~Pdllvv~Dp~~d-----~~ai~EA~ 131 (202)
T 3j20_B 63 EPQSILAVSVRLY---GQKPVKKFGEVTGAR---AIPGRFLPGTMTNPAVKNFFEPDVLIVTDPRAD-----HQAMREAV 131 (202)
T ss_dssp CSSCEEEECCCTT---THHHHHHHHHHHSCC---CCCSSCCSSSSSCSSSSSCCCCSEEEESCTTTS-----HHHHHHHH
T ss_pred CCCeEEEEecChH---HHHHHHHHHHHHCCc---eeCceecCCCcccHhHHhccCCCeEEEeCCccc-----hHHHHHHH
Confidence 4567888898764 566777777776633 445556555443221 1234444332221 34678888
Q ss_pred HcCCcEEEEecCCC
Q psy1915 328 ARDGRPIVICEKGD 341 (361)
Q Consensus 328 ~~g~~~v~I~~~~~ 341 (361)
..|.++|++++...
T Consensus 132 ~l~IP~Ial~DTn~ 145 (202)
T 3j20_B 132 EIGIPIVALVDTEN 145 (202)
T ss_dssp HHTCCEEEEECTTC
T ss_pred HcCCCEEEEEcCCC
Confidence 89999999997653
No 125
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=43.42 E-value=24 Score=25.11 Aligned_cols=44 Identities=20% Similarity=0.208 Sum_probs=34.5
Q ss_pred EEEEcCCCCc---HHHHHHHHHHHHcCCeEEEEEcCCCCccccccCe
Q psy1915 134 CFFISQSGET---ADSLMALRYCKARGALIVGVTNTVGSSISRESHC 177 (361)
Q Consensus 134 vI~iS~SG~t---~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~ 177 (361)
|-.|...|+. -.+-+|++.|++.|...|-|..+..-|.+++-|+
T Consensus 16 Vrli~~~Ge~lGv~~~~eAl~~A~e~~LDLVevsp~a~PPVCkImDy 62 (78)
T 1tif_A 16 VRLIDQNGDQLGIKSKQEALEIAARRNLDLVLVAPNAKPPVCRIMDY 62 (78)
T ss_dssp EEEECTTSCEEEEEEHHHHHHHHHHTTCEEEEEETTSSSCEEEEECH
T ss_pred EEEECCCCcCCCcccHHHHHHHHHHcCCCEEEECCCCCCCEEEEecc
Confidence 3344455543 5677999999999999999999988899988775
No 126
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=43.23 E-value=82 Score=24.36 Aligned_cols=32 Identities=13% Similarity=-0.121 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCcHHHHHHHHH-HHHcCCeEEEE
Q psy1915 132 DVCFFISQSGETADSLMALRY-CKARGALIVGV 163 (361)
Q Consensus 132 dlvI~iS~SG~t~e~~~a~~~-ak~~g~~~i~I 163 (361)
-+++-.|.+|+|+.+.+.+.. +.+.|..+..+
T Consensus 4 i~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~ 36 (147)
T 2hna_A 4 ITLISGSTLGGAEYVAEHLAEKLEEAGFTTETL 36 (147)
T ss_dssp EEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCchHHHHHHHHHHHHHHHCCCceEEe
Confidence 467788999999999998865 56667776544
No 127
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=41.96 E-value=1.7e+02 Score=25.56 Aligned_cols=88 Identities=13% Similarity=0.103 Sum_probs=52.4
Q ss_pred cCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCcc-----CCCcEEEEEcCCccHHHHHHHHHHHH
Q psy1915 253 EQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALID-----NSMPVIMILTRDPVYVKCMNALLQVI 327 (361)
Q Consensus 253 ~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~-----~~~~vi~i~~~g~~~~~~~~~~~~~~ 327 (361)
+...+.|+|+. ..+++.-+|+-+.++. .+...-|.-|.+-... .-.++|++.+.. ...++.++.
T Consensus 69 ~~~~vlfVgTk---~~~q~~V~k~A~~~g~---~~v~~rwlgGtLTN~~t~~f~~PdllvV~Dp~~-----d~~ai~EA~ 137 (252)
T 3u5c_A 69 NPEDVVAISSR---TFGQRAVLKFAAHTGA---TPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRS-----DAQAIKEAS 137 (252)
T ss_dssp SGGGEEEEECS---HHHHHHHHHHHHHSSC---EEEESCCCTTSSSCTTSTTCCCCSEEEESCTTT-----THHHHHHHH
T ss_pred cCCEEEEEeCC---cHHHHHHHHHHHHhCC---ceecCcccCCcccChhhhhccCCceEEEeCCcc-----chHHHHHHH
Confidence 45678888875 3567777788777763 3445556655443221 123444433222 134678888
Q ss_pred HcCCcEEEEecCCCchhhhcccceEE
Q psy1915 328 ARDGRPIVICEKGDTETQALATKTLE 353 (361)
Q Consensus 328 ~~g~~~v~I~~~~~~~~~~~~d~~i~ 353 (361)
..|.++|++++....+ +..|+.|-
T Consensus 138 ~l~IP~Ial~DTn~~p--~~VD~~IP 161 (252)
T 3u5c_A 138 YVNIPVIALTDLDSPS--EFVDVAIP 161 (252)
T ss_dssp TTTCCEEEEECTTCCC--TTCSSEEE
T ss_pred HcCCCEEEEEcCCCCc--ccCCEEEe
Confidence 8999999999765332 23565553
No 128
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=41.69 E-value=66 Score=28.33 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=34.2
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
...|++|++...-+ -.|++.|+..|++||+|.+. +++.. ..|+.|+.+
T Consensus 157 ~~Pdll~V~Dp~~e----~~Ai~EA~~l~IPvIaivDT-n~dp~-~VdypIP~N 204 (256)
T 2vqe_B 157 RLPDAIFVVDPTKE----AIAVREARKLFIPVIALADT-DSDPD-LVDYIIPGN 204 (256)
T ss_dssp SCCSEEEESCTTTT----HHHHHHHHHTTCCCEECCCT-TSCGG-GCSEECCSC
T ss_pred cCCCEEEEeCCccc----hHHHHHHHHcCCCEEEEecC-CCCch-hcceEeecC
Confidence 45688888876443 35677888899999999976 56544 567766543
No 129
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=41.52 E-value=1.8e+02 Score=25.45 Aligned_cols=88 Identities=13% Similarity=0.115 Sum_probs=51.5
Q ss_pred hcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCcc-----CCCcEEEEEcCCccHHHHHHHHHHH
Q psy1915 252 YEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALID-----NSMPVIMILTRDPVYVKCMNALLQV 326 (361)
Q Consensus 252 ~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i~-----~~~~vi~i~~~g~~~~~~~~~~~~~ 326 (361)
.+...+.|+|.-. -+++.-.++-+.++. .|...-|.-|-+-... .-.++|++.+.. ...+++|+
T Consensus 102 ~~~~~iLfVgTk~---~aq~~V~~~A~~~g~---~yv~~RWlgG~LTN~~~~~f~~PdlliV~Dp~~-----e~~AI~EA 170 (253)
T 3bch_A 102 ENPADVSVISSRN---TGQRAVLKFAAATGA---TPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRA-----DHQPLTEA 170 (253)
T ss_dssp SSGGGEEEEECSH---HHHHHHHHHHHHHCC---EEEESCCCTTTTTCCSCSTTCSCSEEEESCTTT-----THHHHHHH
T ss_pred hCCCeEEEEeCCH---HHHHHHHHHHHHhCC---eeecceecCCcccCccccccCCCCEEEEECCCc-----cchHHHHH
Confidence 3456788888754 355666666666653 3555666666443221 223444432222 13478889
Q ss_pred HHcCCcEEEEecCCCchhhhcccceE
Q psy1915 327 IARDGRPIVICEKGDTETQALATKTL 352 (361)
Q Consensus 327 ~~~g~~~v~I~~~~~~~~~~~~d~~i 352 (361)
...|.++|++++.... + +..|+.|
T Consensus 171 ~~lgIPvIalvDTn~d-p-~~VDy~I 194 (253)
T 3bch_A 171 SYVNLPTIALCNTDSP-L-RYVDIAI 194 (253)
T ss_dssp HHTTCCEEEEECTTCC-C-TTCSEEE
T ss_pred HHhCCCEEEEEcCCCC-c-ccCceEe
Confidence 9999999999986532 2 2345554
No 130
>1tmo_A TMAO reductase, trimethylamine N-oxide reductase; oxidoreductase, oxotransferase, molybdoenzyme, MO-cofactor, molybdenum; HET: 2MD; 2.50A {Shewanella massilia} SCOP: b.52.2.2 c.81.1.1
Probab=41.18 E-value=24 Score=36.57 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=64.5
Q ss_pred HHHHHHHHHH---cCC-eEEEEEcCCCCcccccc-CeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHH--
Q psy1915 146 SLMALRYCKA---RGA-LIVGVTNTVGSSISRES-HCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQT-- 218 (361)
Q Consensus 146 ~~~a~~~ak~---~g~-~~i~IT~~~~S~la~~a-d~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~-- 218 (361)
+...++.+|+ +|+ ++|.|-.. .++.++.| |..|.+..|.+. .+ ++.++-..+.....+ .+
T Consensus 236 ~~~~~~~a~~~~~~G~~klivIDPr-~t~ta~~a~d~~l~irPGtD~------al-----~~a~~~~ii~e~l~D-~~fi 302 (829)
T 1tmo_A 236 SFAYLAQLKEKVKQGKIRVISIDPV-VTKTQAYLGCEQLYVNPQTDV------TL-----MLAIAHEMISKKLYD-DKFI 302 (829)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEECSS-CCHHHHHHTCEEECCCTTCHH------HH-----HHHHHHHHHHTTCSC-HHHH
T ss_pred HHHHHHHHHHHhhCCCceEEEECCC-CCCcchhhcCEEecccCCCHH------HH-----HHHHHHHHHHCCccc-HHHH
Confidence 3355666777 899 98888655 67888888 998888654321 11 111111111111110 01
Q ss_pred -----HHHHHHHHHH-------HHHHHHHHHHc-ccHHHHHHHHHHhcCCeEEEEeccCC----HHHHHHHHHHHHHhh
Q psy1915 219 -----RRNEIIKGLK-------VIHEQIREVLQ-MDSEVQQLAKEMYEQKSMLLMGRGYN----YATCMEGALKIKELT 280 (361)
Q Consensus 219 -----~~~~~~~~l~-------~l~~~~~~~l~-~~~~~~~~a~~l~~~~~i~~iG~G~~----~~~A~e~alkl~E~~ 280 (361)
-++++.+.+. .-|+.+.++-. ..+.++++|+.+...+.+++.|.|.. -.....+...|.-++
T Consensus 303 ~~~t~gf~~~~~~v~~~~dg~~~tpe~aa~itGv~~~~I~~~A~~~a~~~~~i~~g~g~~~~~~g~~~~~ai~~L~~lt 381 (829)
T 1tmo_A 303 QGYSLGFEEFVPYVMGTKDGVAKTPEWAAPICGVEAHVIRDLAKTLVKGRTQFMMGWCIQRQQHGEQPYWMAAVLATMI 381 (829)
T ss_dssp HHHEECHHHHHHHHHTTTTSCCCCHHHHHHHHTCCHHHHHHHHHHHHHSCEEEEECSGGGSSTTTHHHHHHHHHHHHHH
T ss_pred HHhcccHHHHHHHhcCCCCCCcCCHHHHHHHHCcCHHHHHHHHHHHhcCCCEEEeccchhhhhhhHHHHHHHHHHHHHh
Confidence 0223333322 12344444333 34678899999988777777887632 222334444455444
No 131
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=41.17 E-value=1.3e+02 Score=31.00 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=21.6
Q ss_pred cCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 329 RDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 329 ~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
+|+++|+|.... ++.++.+|..+.+-+..|
T Consensus 208 ~G~klivIDPr~-t~ta~~AD~~l~irPGtD 237 (802)
T 3ml1_A 208 PKTRVVVLSTFT-HRCFDLADIGIIFKPQTD 237 (802)
T ss_dssp TTCEEEEEESSB-CGGGGTCSEEEECCTTTH
T ss_pred CCCEEEEEeCCC-CchhHHhccEeccCCCHH
Confidence 688888877655 455677898888776654
No 132
>3ljk_A Glucose-6-phosphate isomerase; structural genomics, IDP02733, cytoplasm, gluconeogenesis, glycolysis; HET: MSE MES; 1.48A {Francisella tularensis} PDB: 3m5p_A* 3q7i_A* 3q88_A*
Probab=40.75 E-value=31 Score=33.92 Aligned_cols=27 Identities=15% Similarity=0.073 Sum_probs=20.4
Q ss_pred CCEEEEEcCCCCcHHHHHHHH-HHHHcC
Q psy1915 131 DDVCFFISQSGETADSLMALR-YCKARG 157 (361)
Q Consensus 131 ~dlvI~iS~SG~t~e~~~a~~-~ak~~g 157 (361)
+++.+=+|.-.-|.++++++. .|++.|
T Consensus 40 ~~l~~D~Sk~~~~~~~~~~l~~la~~~~ 67 (543)
T 3ljk_A 40 QNIYFDYSKNLINDYILKSLLESAEKSS 67 (543)
T ss_dssp TTEEEECTTSSCCHHHHHHHHHHHHHSS
T ss_pred CCEEEEecCCcCCHHHHHHHHHHHHhCC
Confidence 468888889899999997765 566643
No 133
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=40.58 E-value=38 Score=29.58 Aligned_cols=41 Identities=10% Similarity=0.002 Sum_probs=36.7
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCc
Q psy1915 130 RDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSS 170 (361)
Q Consensus 130 ~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~ 170 (361)
+.|++|.+|-.+-.+---.|=+..++.|.++|.|+..+.-.
T Consensus 64 ~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K 104 (283)
T 1qv9_A 64 EPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPGLK 104 (283)
T ss_dssp CCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGGGG
T ss_pred CCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcchh
Confidence 45899999999999999999999999999999999876544
No 134
>4em6_D Glucose-6-phosphate isomerase; GPI, phosphoglucose isomerase phosphohexose isomerase, PHI, ssgcid; 1.90A {Brucella melitensis BV}
Probab=40.12 E-value=35 Score=33.68 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=20.4
Q ss_pred CCEEEEEcCCCCcHHHHHHHH-HHHHcC
Q psy1915 131 DDVCFFISQSGETADSLMALR-YCKARG 157 (361)
Q Consensus 131 ~dlvI~iS~SG~t~e~~~a~~-~ak~~g 157 (361)
+++.+=+|.-.-|.++++++. .|++.|
T Consensus 50 ~~~~~D~Sk~~~~~~~~~~l~~la~~~~ 77 (553)
T 4em6_D 50 DDLLFDWSKCRVNDETMALLKELAVAAD 77 (553)
T ss_dssp TTEEEECTTSSCCHHHHHHHHHHHHHTT
T ss_pred CCEEEEccCCcCCHHHHHHHHHHHHhCC
Confidence 368888888889999997764 566653
No 135
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=39.96 E-value=50 Score=30.58 Aligned_cols=49 Identities=22% Similarity=0.110 Sum_probs=38.2
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCc---cccccCeeEEcc
Q psy1915 131 DDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSS---ISRESHCGIHIN 182 (361)
Q Consensus 131 ~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~---la~~ad~~l~~~ 182 (361)
+++.|++=-|| + -..+++.||+.|..|++++.+++.| -.+.+|..+..+
T Consensus 17 ~~~~I~ilGs~-l--~~~l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d 68 (361)
T 2r7k_A 17 DEITIATLGSH-T--SLHILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVD 68 (361)
T ss_dssp TSCEEEEESST-T--HHHHHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECS
T ss_pred cCCEEEEECcH-H--HHHHHHHHHHCCCEEEEEECCCCCCcccccccCceEEECC
Confidence 34667777788 3 4447788999999999999998887 667888877665
No 136
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=39.94 E-value=17 Score=25.24 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=17.8
Q ss_pred hhhhHHHHHHHHHHhhhccCC
Q psy1915 11 KTRLEIIELLIKGLKRLEYRG 31 (361)
Q Consensus 11 ~~~~~~~~~~~~~~~~l~~~~ 31 (361)
..-.|.+|.+-|..|||||+.
T Consensus 60 eqakelleliarllqklgykd 80 (96)
T 2jvf_A 60 EQAKELLELIARLLQKLGYKD 80 (96)
T ss_dssp HHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHHHHhCCCc
Confidence 345689999999999999985
No 137
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=37.52 E-value=53 Score=26.65 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=34.5
Q ss_pred HHHHHHHHhcC-CeEEEEeccCCHHHHHHHHHHHHHhhCcceEEE
Q psy1915 244 VQQLAKEMYEQ-KSMLLMGRGYNYATCMEGALKIKELTYMHSEGI 287 (361)
Q Consensus 244 ~~~~a~~l~~~-~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~ 287 (361)
+++.++.+.++ +.++++|.|....-+.+...+|-|..++|...-
T Consensus 24 v~~aa~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t 68 (170)
T 3cf4_G 24 PEMAAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIPIAAT 68 (170)
T ss_dssp HHHHHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCccchhHHHHHHHHHHHhCCCEEEC
Confidence 55666777765 578888999887778888899999999987653
No 138
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=37.39 E-value=42 Score=30.64 Aligned_cols=51 Identities=22% Similarity=0.117 Sum_probs=41.7
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEE
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIH 180 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~ 180 (361)
.+-|++|++-.|+...-.......++++|++++- .|...++....+|+.|.
T Consensus 205 ~~aDllLViGTSL~V~Paa~l~~~a~~~G~~vvi-IN~~~t~~d~~adl~i~ 255 (318)
T 3k35_A 205 RNADLSITLGTSLQIRPSGNLPLATKRRGGRLVI-VNLQPTKHDRHADLRIH 255 (318)
T ss_dssp HTCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEE-ECSSCCTTGGGCSEEEC
T ss_pred hcCCEEEEEccCCCchhhhhhHHHHHhcCCEEEE-ECCCCCCCCCcccEEEe
Confidence 4679999999999988888888889999998664 45566888889998764
No 139
>3qki_A Glucose-6-phosphate isomerase; structural genomics, structural genomics consortium, SGC; 1.92A {Plasmodium falciparum} PDB: 3pr3_A
Probab=36.75 E-value=64 Score=32.10 Aligned_cols=27 Identities=15% Similarity=0.199 Sum_probs=19.7
Q ss_pred CCEEEEEcCCCCcHHHHHHHH-HHHHcC
Q psy1915 131 DDVCFFISQSGETADSLMALR-YCKARG 157 (361)
Q Consensus 131 ~dlvI~iS~SG~t~e~~~a~~-~ak~~g 157 (361)
+++.+=+|.-.-|.++++++. .|++.+
T Consensus 62 ~~l~~D~Sk~~i~~~~~~~L~~la~~~~ 89 (597)
T 3qki_A 62 KNFYMDLSRQRYSEKTLNKLVEYAEEVE 89 (597)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHHHHHTT
T ss_pred CCEEEEcccCcCCHHHHHHHHHHHHhcC
Confidence 367888888888999987764 456543
No 140
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=35.98 E-value=34 Score=29.61 Aligned_cols=52 Identities=19% Similarity=0.054 Sum_probs=39.2
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHI 181 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 181 (361)
.+-|++|++-.|+.+.-.....+.++++|+++|.|-. ..++....+|..|.-
T Consensus 166 ~~adl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~-~~t~~~~~~~~~i~~ 217 (235)
T 1s5p_A 166 SMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNL-EPSQVGNEFAEKYYG 217 (235)
T ss_dssp HHCSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEES-SSCC---CCSEEEES
T ss_pred hcCCEEEEECcCCchhhHHHHHHHHHHcCCeEEEEEC-CCCCCCccccEEEeC
Confidence 3469999999999997778888899999999886654 457777788877654
No 141
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=35.43 E-value=83 Score=27.66 Aligned_cols=58 Identities=14% Similarity=0.003 Sum_probs=42.1
Q ss_pred cCCceEEEecccccccCCCCCCCCEEEEEcCCC--CcHHHHHHHHHHHHcCCeEEEEEcC
Q psy1915 109 TELPVMVELASDFLDRNTPVFRDDVCFFISQSG--ETADSLMALRYCKARGALIVGVTNT 166 (361)
Q Consensus 109 ~g~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG--~t~e~~~a~~~ak~~g~~~i~IT~~ 166 (361)
.|..+....+.+.......+.+-|++|...... -+++.+++++..-+.|.-.|.+-+.
T Consensus 29 ~g~~V~~i~~~~~~~~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgLi~~gG~ 88 (259)
T 3rht_A 29 WQWEFDYIPSHVGLDVGELLAKQDLVILSDYPAERMTAQAIDQLVTMVKAGCGLVMLGGW 88 (259)
T ss_dssp TTCCCEEECTTSCBCSSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CCceEEEecccccccChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHHhCCeEEEecCc
Confidence 688888777665432223466789998886554 5788888888877789998888653
No 142
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=33.53 E-value=2e+02 Score=25.02 Aligned_cols=79 Identities=13% Similarity=0.163 Sum_probs=45.7
Q ss_pred HhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEe-cCCccccCccCc-----cCCCcEEEEEcCCccHHHHHHHHH
Q psy1915 251 MYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIM-AGELKHGPLALI-----DNSMPVIMILTRDPVYVKCMNALL 324 (361)
Q Consensus 251 l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~-~~E~~Hgp~~~i-----~~~~~vi~i~~~g~~~~~~~~~~~ 324 (361)
..+...+.|+|+- .-+++.-.++-+.++.+ |. ..-|.-|.+-.. ..-.++|++.+.. ...+++
T Consensus 63 i~~~~~iLfVgtk---~~~~~~V~~~A~~~g~~---yv~~~RWlgG~LTN~~t~~~~~PdlliV~Dp~~-----e~~ai~ 131 (241)
T 2xzm_B 63 VQHPEDVMVVCSR---IYGQRAAIKFAGYTHCK---STSSSRWTPGTLTNYQTLKYEEPRVLIVTDPRS-----DFQAIK 131 (241)
T ss_dssp CSSGGGEEEECCS---HHHHHHHHHHHHHHTCB---CCCCSSCCTTTTTCTTCTTCCCCSEEEESCTTT-----THHHHH
T ss_pred HhCCCeEEEEECC---HHHHHHHHHHHHHhCCE---EeccccccCCcccCccccccCCCCEEEEECCCc-----chHHHH
Confidence 4455678888874 33566666666666533 33 445555543322 1223444432221 134788
Q ss_pred HHHHcCCcEEEEecCC
Q psy1915 325 QVIARDGRPIVICEKG 340 (361)
Q Consensus 325 ~~~~~g~~~v~I~~~~ 340 (361)
|+...|.++|++++..
T Consensus 132 EA~~l~IPvIalvDTn 147 (241)
T 2xzm_B 132 EASYVNIPVIALCDSD 147 (241)
T ss_dssp HHTTTTCCEEECCCSS
T ss_pred HHHHhCCCEEEEecCC
Confidence 8888999999998764
No 143
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=33.51 E-value=40 Score=29.95 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=42.9
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q psy1915 128 VFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHI 181 (361)
Q Consensus 128 ~~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 181 (361)
+.+-|++|++-.|+...-....+..++++|++++.|. ...+++...+|+.|.-
T Consensus 210 ~~~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN-~~~t~~d~~~~~~i~g 262 (273)
T 3riy_A 210 LAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFN-TETTPATNRFRFHFQG 262 (273)
T ss_dssp HHHCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEE-SSCCTTGGGSSEEEES
T ss_pred HhcCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEEC-CCCCCCCcceeEEEeC
Confidence 3457999999999998888888888888999987665 5578888889988754
No 144
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=33.15 E-value=47 Score=33.73 Aligned_cols=41 Identities=22% Similarity=0.224 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 318 KCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 318 ~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
.....+.+.+++|+++|+|.... ++.++.+|..+.+.+..|
T Consensus 178 ~~~~~l~~a~~~G~klividPr~-t~ta~~Ad~~l~irPGtD 218 (727)
T 2e7z_A 178 SQFNDLKAALKRGCKLIVLDPRR-TKVAEMADIWLPLRYGTD 218 (727)
T ss_dssp HHHHHHHHHHHHTCEEEEECSSC-CHHHHHCSEEECCCTTCH
T ss_pred HHHHHHHHHHHCCCeEEEECCCC-CcchhhcceeecCCCCcH
Confidence 34456677778899988887664 456667898887776654
No 145
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=33.09 E-value=58 Score=26.24 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=31.5
Q ss_pred CcEEEEEcCCccHHHHHHHHHHHHHc-CCcEEEEecCC--CchhhhcccceEEcCC
Q psy1915 304 MPVIMILTRDPVYVKCMNALLQVIAR-DGRPIVICEKG--DTETQALATKTLEVPH 356 (361)
Q Consensus 304 ~~vi~i~~~g~~~~~~~~~~~~~~~~-g~~~v~I~~~~--~~~~~~~~d~~i~~p~ 356 (361)
..+++++ +|... ..+++.++++ |.+++++.-.+ ..++...||..+.+..
T Consensus 110 d~~vLvS-gD~DF---~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad~fi~l~~ 161 (165)
T 2qip_A 110 DRVILVS-GDGDF---SLLVERIQQRYNKKVTVYGVPRLTSQTLIDCADNFVAIDD 161 (165)
T ss_dssp SEEEEEC-CCGGG---HHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSSEEEECSG
T ss_pred CEEEEEE-CChhH---HHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCCEEEecch
Confidence 3344444 44433 4566778886 98888887543 2357788999888754
No 146
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=32.79 E-value=36 Score=27.89 Aligned_cols=36 Identities=14% Similarity=-0.083 Sum_probs=29.6
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCC
Q psy1915 133 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVG 168 (361)
Q Consensus 133 lvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~ 168 (361)
.+.+.|-||+|+-+...++..+++|.++..|...++
T Consensus 8 ~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~ 43 (169)
T 1xjc_A 8 QVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGH 43 (169)
T ss_dssp EEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC-
T ss_pred EEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCCC
Confidence 456678899999999999999999999888887654
No 147
>1xkp_B Chaperone protein SYCN; YOPN, type III secretion, SYCN, membrane PR chaperon complex; HET: MLY; 1.70A {Yersinia pestis} SCOP: d.198.1.1
Probab=32.54 E-value=22 Score=27.60 Aligned_cols=19 Identities=11% Similarity=-0.019 Sum_probs=16.3
Q ss_pred HHHHHHHHHhhhccCCCCC
Q psy1915 16 IIELLIKGLKRLEYRGYDS 34 (361)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~~ 34 (361)
|=++|..|||+||+.+++.
T Consensus 4 I~~~i~~F~r~mG~~~~~~ 22 (124)
T 1xkp_B 4 IEPIISHFCQDLGVPTSSP 22 (124)
T ss_dssp THHHHHHHHHHTTCCCCSS
T ss_pred hHHHHHHHHHHcCCCCCCC
Confidence 4468999999999999984
No 148
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=32.15 E-value=44 Score=24.88 Aligned_cols=26 Identities=23% Similarity=0.103 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCeEEEEEcCCCC
Q psy1915 144 ADSLMALRYCKARGALIVGVTNTVGS 169 (361)
Q Consensus 144 ~e~~~a~~~ak~~g~~~i~IT~~~~S 169 (361)
+.+.++++.++++|.+++.+||.+..
T Consensus 21 ~~~~~~l~~L~~~G~~~~i~S~~~~~ 46 (137)
T 2pr7_A 21 RRWRNLLAAAKKNGVGTVILSNDPGG 46 (137)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCG
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 56888999999999999999986543
No 149
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=32.00 E-value=32 Score=28.68 Aligned_cols=33 Identities=15% Similarity=0.082 Sum_probs=27.0
Q ss_pred EEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCC
Q psy1915 136 FISQSGETADSLMALRYCKARGALIVGVTNTVG 168 (361)
Q Consensus 136 ~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~ 168 (361)
+-..||+|.+.+..+..++.+|-+++.++...+
T Consensus 15 G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~~d 47 (191)
T 1xx6_A 15 GPMYSGKSEELIRRIRRAKIAKQKIQVFKPEID 47 (191)
T ss_dssp CSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC--
T ss_pred CCCCCcHHHHHHHHHHHHHHCCCEEEEEEeccC
Confidence 344799999999999999999999999984433
No 150
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=31.54 E-value=2.4e+02 Score=23.93 Aligned_cols=80 Identities=4% Similarity=-0.038 Sum_probs=45.7
Q ss_pred eccCCHHHHHHHHHHHHHhhC--cceEEEecCCccccCccCccCCCcEEEEEc-C--CccHHHHHHHHHHHHHc----CC
Q psy1915 261 GRGYNYATCMEGALKIKELTY--MHSEGIMAGELKHGPLALIDNSMPVIMILT-R--DPVYVKCMNALLQVIAR----DG 331 (361)
Q Consensus 261 G~G~~~~~A~e~alkl~E~~~--~~a~~~~~~E~~Hgp~~~i~~~~~vi~i~~-~--g~~~~~~~~~~~~~~~~----g~ 331 (361)
=.|..++.+.+.|.++.+... +.+..+...++.-. . +.+...+|++.+ - |+-.+.....++.+... .+
T Consensus 46 lYgS~tGnte~~A~~La~~l~~g~~v~v~~l~~~~~~--~-l~~~~~vI~~tsTyG~Ge~Pdna~~F~~~L~~~~~~l~~ 122 (219)
T 3hr4_A 46 LFATETGKSEALAWDLGALFSCAFNPKVVCMDKYRLS--C-LEEERLLLVVTSTFGNGDCPGNGEKLKKSLFMLKELNNK 122 (219)
T ss_dssp EEECSSSHHHHHHHHHHHHHTTTSEEEEEEGGGCCGG--G-GGTCSEEEEEEECBTTTBCCGGGHHHHHHHHHCCCCSSC
T ss_pred EEECCchHHHHHHHHHHHHHHcCCCeEEEEcccCCHh--H-hccCCeEEEEEeccCCCcCCHHHHHHHHHHHhcchhhcC
Confidence 466688888888888887653 34556666665322 2 334445555553 2 33333455566666553 35
Q ss_pred cEEEEecCCCch
Q psy1915 332 RPIVICEKGDTE 343 (361)
Q Consensus 332 ~~v~I~~~~~~~ 343 (361)
..++|.+-+|+.
T Consensus 123 ~~~aVfGlGdss 134 (219)
T 3hr4_A 123 FRYAVFGLGSSM 134 (219)
T ss_dssp CEEEEEEEECTT
T ss_pred CEEEEEeCCCcc
Confidence 566776655543
No 151
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=31.13 E-value=2.9e+02 Score=24.73 Aligned_cols=90 Identities=12% Similarity=0.138 Sum_probs=51.5
Q ss_pred HHhcCCeEEEEeccCCHHHHHHHHHHHHHhhCcceEEEecCCccccCccCc-----cCCCcEEEEEcCCccHHHHHHHHH
Q psy1915 250 EMYEQKSMLLMGRGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALI-----DNSMPVIMILTRDPVYVKCMNALL 324 (361)
Q Consensus 250 ~l~~~~~i~~iG~G~~~~~A~e~alkl~E~~~~~a~~~~~~E~~Hgp~~~i-----~~~~~vi~i~~~g~~~~~~~~~~~ 324 (361)
...+...+.|+|.- .-+++.-+|+-+.++. .|...-|.-|-+-.. ..-.++|++.+.. ...+++
T Consensus 67 ~i~~~~~ILfVgTk---~~aq~~V~k~A~~~g~---~yv~~RWlgG~LTN~~t~~f~~PdlliV~Dp~~-----e~~AI~ 135 (295)
T 2zkq_b 67 AIENPADVSVISSR---NTGQRAVLKFAAATGA---TPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRA-----DHQPLT 135 (295)
T ss_dssp HSSCGGGEEEEECS---HHHHHHHHHHHHHHCC---EEEESSCCCC-CCCTTCSSCCCCSEEEESCTTT-----THHHHH
T ss_pred HHhCCCeEEEEeCc---HHHHHHHHHHHHHhCC---ceecceEecccccCcccccccCCCeEEEeCCCc-----chhHHH
Confidence 34456778888874 3355666666666653 344555665543322 1223444432222 135788
Q ss_pred HHHHcCCcEEEEecCCCchhhhcccceE
Q psy1915 325 QVIARDGRPIVICEKGDTETQALATKTL 352 (361)
Q Consensus 325 ~~~~~g~~~v~I~~~~~~~~~~~~d~~i 352 (361)
|+...|.++|++++.... + ++.|+.|
T Consensus 136 EA~~lgIPvIalvDTn~d-p-~~VDy~I 161 (295)
T 2zkq_b 136 EASYVNLPTIALCNTDSP-L-RYVDIAI 161 (295)
T ss_dssp HHHHHTCCEEEEECTTCC-C-TTCSEEE
T ss_pred HHHHhCCCEEEEecCCCC-c-ccCCEEE
Confidence 898999999999986532 2 2345554
No 152
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=31.06 E-value=31 Score=29.70 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHcCCeEEEEEcCCCCcccccc
Q psy1915 143 TADSLMALRYCKARGALIVGVTNTVGSSISRES 175 (361)
Q Consensus 143 t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~a 175 (361)
++++.++++.++++|.+++..|++..-+...+.
T Consensus 24 ~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~ 56 (266)
T 3pdw_A 24 IEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVA 56 (266)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Confidence 568899999999999999999997666655443
No 153
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=30.06 E-value=32 Score=29.56 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=26.3
Q ss_pred cHHHHHHHHHHHHcCCeEEEEEcCCCCccccc
Q psy1915 143 TADSLMALRYCKARGALIVGVTNTVGSSISRE 174 (361)
Q Consensus 143 t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ 174 (361)
++++.++++.++++|.+++..|++..-+...+
T Consensus 26 ~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~ 57 (268)
T 3qgm_A 26 IPEGVEGVKKLKELGKKIIFVSNNSTRSRRIL 57 (268)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCSSSCHHHH
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHH
Confidence 67899999999999999999999765554443
No 154
>1dtc_A Acetyl-delta-toxin; NMR {Staphylococcus aureus} SCOP: j.7.1.1 PDB: 2dtb_A 2kam_A*
Probab=28.46 E-value=12 Score=20.25 Aligned_cols=11 Identities=27% Similarity=0.274 Sum_probs=5.5
Q ss_pred HHHHHHHHHHh
Q psy1915 15 EIIELLIKGLK 25 (361)
Q Consensus 15 ~~~~~~~~~~~ 25 (361)
.||.|+..|++
T Consensus 4 DIisTIgdfvK 14 (26)
T 1dtc_A 4 DIISTIGDLVK 14 (26)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 45555555544
No 155
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=28.25 E-value=1.2e+02 Score=27.34 Aligned_cols=14 Identities=14% Similarity=0.010 Sum_probs=11.5
Q ss_pred CCcEEEEecccccc
Q psy1915 75 GSPLLVGIKTKTRL 88 (361)
Q Consensus 75 g~i~~~G~G~S~~~ 88 (361)
.+++++|.|.++.-
T Consensus 5 ~~i~~iGiGg~Gms 18 (326)
T 3eag_A 5 KHIHIIGIGGTFMG 18 (326)
T ss_dssp CEEEEESCCSHHHH
T ss_pred cEEEEEEECHHHHH
Confidence 47899999998863
No 156
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=27.89 E-value=57 Score=29.65 Aligned_cols=45 Identities=13% Similarity=-0.145 Sum_probs=34.9
Q ss_pred EEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCc---cccccCeeEEcc
Q psy1915 135 FFISQSGETADSLMALRYCKARGALIVGVTNTVGSS---ISRESHCGIHIN 182 (361)
Q Consensus 135 I~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~---la~~ad~~l~~~ 182 (361)
|++=-|| --+.++..||+.|.+|++++.+++.| -.+.||..+..+
T Consensus 5 I~~lGsg---l~~~~~~aAk~lG~~viv~d~~~~~p~~~a~~~ad~~~~~~ 52 (320)
T 2pbz_A 5 VSTIASH---SSLQILLGAKKEGFKTRLYVSPKRRPFYSSLPIVDDLVVAE 52 (320)
T ss_dssp EEEESST---THHHHHHHHHHTTCCEEEEECTTTHHHHHTCTTCSEEEECS
T ss_pred EEEEcCH---hHHHHHHHHHHCCCEEEEEECCCCCccchhhhcCCeEEECC
Confidence 4555566 24556777999999999999998888 777899877665
No 157
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=27.74 E-value=99 Score=28.40 Aligned_cols=37 Identities=14% Similarity=0.055 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 146 SLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 146 ~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
-..+++.|++.|..++++..++++|..+.+|..+..+
T Consensus 24 g~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~ 60 (377)
T 3orq_A 24 GKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAK 60 (377)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECC
Confidence 4567788999999999999999999999999876543
No 158
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=26.69 E-value=41 Score=28.92 Aligned_cols=31 Identities=13% Similarity=0.041 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcCCeEEEEEcCCCCccccc
Q psy1915 144 ADSLMALRYCKARGALIVGVTNTVGSSISRE 174 (361)
Q Consensus 144 ~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ 174 (361)
+.+.++++.++++|.+++..||+.+-+...+
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~ 54 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESV 54 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHH
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Confidence 6889999999999999999998876665544
No 159
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=26.61 E-value=57 Score=30.24 Aligned_cols=51 Identities=24% Similarity=0.139 Sum_probs=40.5
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEE
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIH 180 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~ 180 (361)
.+-|++|++-.|+...-.......++.+|++++.| |...++....+|+.|.
T Consensus 205 ~~aDllLViGTSL~V~Paa~Lp~~a~~~G~~vviI-N~~pT~~d~~adl~i~ 255 (355)
T 3pki_A 205 RNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIV-NLQPTKHDRHADLRIH 255 (355)
T ss_dssp HHCSEEEEESCCCCSTTGGGTTHHHHHTTCEEEEE-CSSCCTTGGGCSEEEC
T ss_pred hcCCEEEEEeeCCCchhhhhhHHHHHhcCCEEEEE-CCCCCCCCCccCEEEe
Confidence 45699999999998888777788889999887655 5556788888888764
No 160
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=26.18 E-value=89 Score=26.72 Aligned_cols=31 Identities=10% Similarity=-0.010 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHHHHcCCeEE
Q psy1915 131 DDVCFFISQSGETADSLMALRYCKARGALIV 161 (361)
Q Consensus 131 ~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i 161 (361)
+-+++.-|++|+|+++.+.+...-+.|..+-
T Consensus 42 kv~IlYgS~tGnte~~A~~La~~l~~g~~v~ 72 (219)
T 3hr4_A 42 RVTILFATETGKSEALAWDLGALFSCAFNPK 72 (219)
T ss_dssp EEEEEEECSSSHHHHHHHHHHHHHTTTSEEE
T ss_pred cEEEEEECCchHHHHHHHHHHHHHHcCCCeE
Confidence 3468888999999999999887656675543
No 161
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=25.87 E-value=1.5e+02 Score=30.28 Aligned_cols=41 Identities=12% Similarity=0.162 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 318 KCMNALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 318 ~~~~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
.....+.+.+++|+++|+|.... ++.++.+|..+.+.+..|
T Consensus 217 ~~~~~~~~a~~~G~klividPr~-t~ta~~Ad~~l~irPGtD 257 (765)
T 2vpz_A 217 TQLQDFALALKNGAKVVVVDPRF-STAAAKAHRWLPIKPGTD 257 (765)
T ss_dssp HHHHHHHHHHHTTCEEEEECSBC-CTTGGGCSEEECCCTTCH
T ss_pred HHHHHHHHHHHCCCEEEEECCCC-CcchhhCCeEeCCCCCcH
Confidence 34456677778899988886654 455667898888766544
No 162
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=25.38 E-value=1.1e+02 Score=28.06 Aligned_cols=37 Identities=19% Similarity=0.024 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q psy1915 145 DSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHI 181 (361)
Q Consensus 145 e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 181 (361)
--..+++.|++.|..++++..++++|..+.+|..+..
T Consensus 25 ~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~ 61 (389)
T 3q2o_A 25 LGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVA 61 (389)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEEC
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEec
Confidence 4567788899999999999999999999999977654
No 163
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=25.36 E-value=1.1e+02 Score=24.26 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=23.0
Q ss_pred EEEEEcCCCCcHHHHHHHH-HHHHcCCeEE
Q psy1915 133 VCFFISQSGETADSLMALR-YCKARGALIV 161 (361)
Q Consensus 133 lvI~iS~SG~t~e~~~a~~-~ak~~g~~~i 161 (361)
+++-.|.+|+|+.+.+++. .+++.|+.+-
T Consensus 4 ~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~ 33 (161)
T 3hly_A 4 LIGYLSDYGYSDRLSQAIGRGLVKTGVAVE 33 (161)
T ss_dssp EEEECTTSTTHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEECCChHHHHHHHHHHHHHHhCCCeEE
Confidence 6788899999999999875 4667787643
No 164
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=24.96 E-value=1.8e+02 Score=26.36 Aligned_cols=42 Identities=19% Similarity=0.189 Sum_probs=33.0
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 139 QSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 139 ~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
-+| ......++.+++.|..++.+..++++|-...+|..+..+
T Consensus 18 g~g--~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d~~~~~~ 59 (391)
T 1kjq_A 18 GSG--ELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVIN 59 (391)
T ss_dssp SCS--HHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECC
T ss_pred CCC--HHHHHHHHHHHHcCCEEEEEECCCCCchhhhccceEECC
Confidence 445 345677888999999999999999998888888766553
No 165
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=24.79 E-value=1.2e+02 Score=28.40 Aligned_cols=37 Identities=8% Similarity=-0.064 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q psy1915 145 DSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHI 181 (361)
Q Consensus 145 e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 181 (361)
--...++.|++.|.+++++..++++|..+.||..+..
T Consensus 46 lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~ 82 (419)
T 4e4t_A 46 LGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRA 82 (419)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECC
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEEC
Confidence 3456778899999999999989999999999976653
No 166
>1kqf_A FDH-N alpha, formate dehydrogenase, nitrate-inducible, major S; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1kqg_A*
Probab=24.79 E-value=1.4e+02 Score=31.64 Aligned_cols=97 Identities=11% Similarity=0.154 Sum_probs=0.0
Q ss_pred HHHHH-HcCCeEEEEEcCCCCccccccCeeEEcccCCCcccccchhHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHH
Q psy1915 150 LRYCK-ARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLK 228 (361)
Q Consensus 150 ~~~ak-~~g~~~i~IT~~~~S~la~~ad~~l~~~~~~e~~~~~t~s~t~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~ 228 (361)
+..|+ ++|+++|.|--+ .+..++.||..|.+..|.+..+ ++.++-..+.....+ .++++...
T Consensus 244 i~~a~~~~GaklivIDPr-~t~ta~~AD~~l~irPGTD~AL-----------~lam~~~ii~~~l~D-----~~fv~~~t 306 (1015)
T 1kqf_A 244 AMEAKNNNDATLIVVDPR-FTRTASVADIYAPIRSGTDITF-----------LSGVLRYLIENNKIN-----AEYVKHYT 306 (1015)
T ss_dssp HHHHHHHSCCEEEEECSS-CCHHHHTCSEEECCCTTCHHHH-----------HHHHHHHHHHTTCSC-----HHHHHHHB
T ss_pred HHHHHHHCCCeEEEEeCC-CCchhHhhCeeeccCCCchHHH-----------HHHHHHHHHHcCCcC-----HHHHHhhc
Q ss_pred HH----------------------------------------------------------------HHHHHHHHc-ccHH
Q psy1915 229 VI----------------------------------------------------------------HEQIREVLQ-MDSE 243 (361)
Q Consensus 229 ~l----------------------------------------------------------------~~~~~~~l~-~~~~ 243 (361)
.. |+.+.++-. ..+.
T Consensus 307 ~~~~LV~~d~~f~~g~~~g~d~~~~~~~~~~~~y~~~~~g~~~~~~~~~~~~tvf~~l~~~~~~ytpe~aa~itGvp~e~ 386 (1015)
T 1kqf_A 307 NASLLVRDDFAFEDGLFSGYDAEKRQYDKSSWNYQLDENGYAKRDETLTHPRCVWNLLKEHVSRYTPDVVENICGTPKAD 386 (1015)
T ss_dssp STTBBBCTTCCEETTEETTEETTTTEECCTTSSBCBCTTSSBCBCTTSCSTTBHHHHHHHHHTTCCHHHHHHHHCCCHHH
T ss_pred CcceeeccccccccccccccccccccccccchhhhhccCCcccccccccccchHHHHHHHHHhcCCHHHHHHHHCcCHHH
Q ss_pred HHHHHHHHhcC-----CeEEEEecc
Q psy1915 244 VQQLAKEMYEQ-----KSMLLMGRG 263 (361)
Q Consensus 244 ~~~~a~~l~~~-----~~i~~iG~G 263 (361)
++++|+.+... ..+++.|.|
T Consensus 387 I~~lA~~~a~a~~~~~~~~i~~g~G 411 (1015)
T 1kqf_A 387 FLKVCEVLASTSAPDRTTTFLYALG 411 (1015)
T ss_dssp HHHHHHHHHGGGSTTCCEEEEESHH
T ss_pred HHHHHHHHHhccCCCCcEEEEECcc
No 167
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=24.48 E-value=39 Score=26.81 Aligned_cols=26 Identities=8% Similarity=0.031 Sum_probs=20.2
Q ss_pred cHHHHHHHHHHHHcCCeEEEEEcCCC
Q psy1915 143 TADSLMALRYCKARGALIVGVTNTVG 168 (361)
Q Consensus 143 t~e~~~a~~~ak~~g~~~i~IT~~~~ 168 (361)
++.++++++.++++|..++..|+++.
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~ 51 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREG 51 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 45778888888888888888888753
No 168
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=24.20 E-value=97 Score=23.76 Aligned_cols=30 Identities=13% Similarity=0.117 Sum_probs=23.1
Q ss_pred CEEEEEcCCCCcHHHHHHHHH-HHHcCCeEE
Q psy1915 132 DVCFFISQSGETADSLMALRY-CKARGALIV 161 (361)
Q Consensus 132 dlvI~iS~SG~t~e~~~a~~~-ak~~g~~~i 161 (361)
-+++..|.+|+|+.+.+.+.. +++.|..+-
T Consensus 3 i~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~ 33 (147)
T 1f4p_A 3 ALIVYGSTTGNTEYTAETIARELADAGYEVD 33 (147)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHhcCCeeE
Confidence 367889999999999988754 566777653
No 169
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=24.17 E-value=6.8 Score=34.15 Aligned_cols=46 Identities=30% Similarity=0.565 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhhhhccCccceeeeccCCcEEEEeccc-ccccccc
Q psy1915 47 RHIAIMEGAFALCFKSKLFPGECVATRRGSPLLVGIKTK-TRLATDH 92 (361)
Q Consensus 47 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~i~~~G~G~S-~~~a~~~ 92 (361)
+.++++++.|+.++.+...+++++.+++++++++|.+.. ..+|++.
T Consensus 147 ~~~~~l~G~fa~~i~d~~~~~~l~~~Rd~~PL~~~~~~~~~~~aSE~ 193 (240)
T 1xff_A 147 RAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQ 193 (240)
T ss_dssp HHGGGCCEEEEEEEEETTCTTCEEEEEEBSCCEEEECSSCEEEESSG
T ss_pred HHHHhcccceEEEEEecCCCCEEEEEECCCceEEEEeCCEEEEEECH
Confidence 334444444444443333467888888889999998754 4455443
No 170
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=23.90 E-value=62 Score=27.81 Aligned_cols=32 Identities=9% Similarity=0.046 Sum_probs=27.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEEEcCCCCcccc
Q psy1915 142 ETADSLMALRYCKARGALIVGVTNTVGSSISR 173 (361)
Q Consensus 142 ~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~ 173 (361)
-++++.++++.++++|.+++..|+++-..+.+
T Consensus 22 i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~ 53 (246)
T 3f9r_A 22 QTDEMRALIKRARGAGFCVGTVGGSDFAKQVE 53 (246)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence 46899999999999999999999987665543
No 171
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=23.79 E-value=49 Score=26.48 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEE
Q psy1915 130 RDDVCFFISQSGETADSLMALRYCKARGALIVGVT 164 (361)
Q Consensus 130 ~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT 164 (361)
++-++|-.|.+|+|+.+.+.+. +..|+.++-|.
T Consensus 5 ~kilIvY~S~tG~T~~vA~~Ia--~~l~~~~~~i~ 37 (162)
T 3klb_A 5 RKILVAYFSCSGVTKAVAEKLA--AITGADLYEIK 37 (162)
T ss_dssp SCEEEEECCSSSHHHHHHHHHH--HHHTCEEEECC
T ss_pred CCEEEEEECCCchHHHHHHHHH--HHhCCCeEEEE
Confidence 3568999999999999998874 45577776665
No 172
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=23.14 E-value=80 Score=27.53 Aligned_cols=52 Identities=13% Similarity=-0.061 Sum_probs=39.8
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q psy1915 129 FRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHI 181 (361)
Q Consensus 129 ~~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 181 (361)
.+-|++|++-.|+...-.....+.++++|+++|.|- ...+++...+|+.|.-
T Consensus 182 ~~adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~iN-~~~~~~d~~~~~~i~~ 233 (253)
T 1ma3_A 182 KHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVN-AEPTMADPIFDVKIIG 233 (253)
T ss_dssp HHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEE-SSCCTTGGGCSEEEES
T ss_pred HhCCEEEEECCCceeccHHHHHHHHHHcCCeEEEEe-CCCCCCCCceeEEEeC
Confidence 345999999989888777777888988899987665 4567777778776653
No 173
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=22.94 E-value=86 Score=23.73 Aligned_cols=27 Identities=26% Similarity=0.074 Sum_probs=23.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEEEcCCC
Q psy1915 142 ETADSLMALRYCKARGALIVGVTNTVG 168 (361)
Q Consensus 142 ~t~e~~~a~~~ak~~g~~~i~IT~~~~ 168 (361)
-++.+.++++.++++|.+++..|+++.
T Consensus 25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 25 PRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 357899999999999999999998764
No 174
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=22.85 E-value=61 Score=29.94 Aligned_cols=37 Identities=11% Similarity=-0.075 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCeEEEEEcCC-CCccccccCeeEEcc
Q psy1915 146 SLMALRYCKARGALIVGVTNTV-GSSISRESHCGIHIN 182 (361)
Q Consensus 146 ~~~a~~~ak~~g~~~i~IT~~~-~S~la~~ad~~l~~~ 182 (361)
.+.+++.|++.|..+++++... ++|-.+.+|..+.++
T Consensus 19 ~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~ad~~~~~~ 56 (403)
T 4dim_A 19 QLGLYKAAKELGIHTIAGTMPNAHKPCLNLADEISYMD 56 (403)
T ss_dssp GHHHHHHHHHHTCEEEEEECSSCCHHHHHHCSEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEcCCCCCCcchhhCCeEEEec
Confidence 4668888999999999997643 557777888766654
No 175
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=22.42 E-value=65 Score=26.07 Aligned_cols=27 Identities=22% Similarity=0.113 Sum_probs=22.9
Q ss_pred cHHHHHHHHHHHHcCCeEEEEEcCCCC
Q psy1915 143 TADSLMALRYCKARGALIVGVTNTVGS 169 (361)
Q Consensus 143 t~e~~~a~~~ak~~g~~~i~IT~~~~S 169 (361)
-+.+.++++.++++|.++..+||...+
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~ 62 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAILSNTATS 62 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCSSC
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCcc
Confidence 367889999999999999999987653
No 176
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=22.40 E-value=1.8e+02 Score=30.70 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=26.4
Q ss_pred HHHHHHHHcCCcEEEEecCCCchhhhcccceEEcCCCCC
Q psy1915 321 NALLQVIARDGRPIVICEKGDTETQALATKTLEVPHTVD 359 (361)
Q Consensus 321 ~~~~~~~~~g~~~v~I~~~~~~~~~~~~d~~i~~p~~~~ 359 (361)
..+.+.+++|+++|+|.... ++.++.+|..+.+-+..|
T Consensus 204 ~~~~~a~~~G~klivIDPr~-t~ta~~AD~~l~irPGTD 241 (977)
T 1h0h_A 204 KWVMRAKDKGATLIHVDPRY-TRTSTKCDLYAPLRSGSD 241 (977)
T ss_dssp HHHHHHHHTTCEEEEECSSC-CTTGGGCSEEECCCTTCH
T ss_pred HHHHHHHHCCCeEEEECCCC-CchhHHhCeeeccCCCch
Confidence 44556677888988887654 455667898887766654
No 177
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=22.19 E-value=59 Score=25.81 Aligned_cols=25 Identities=24% Similarity=0.103 Sum_probs=21.6
Q ss_pred cHHHHHHHHHHHHcCCeEEEEEcCC
Q psy1915 143 TADSLMALRYCKARGALIVGVTNTV 167 (361)
Q Consensus 143 t~e~~~a~~~ak~~g~~~i~IT~~~ 167 (361)
.+.+.++++.+|++|.++..+||.+
T Consensus 29 ~~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 29 LPGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCC
Confidence 3568889999999999999999865
No 178
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=21.53 E-value=2.4e+02 Score=28.95 Aligned_cols=56 Identities=9% Similarity=-0.028 Sum_probs=35.3
Q ss_pred CCCCEEEEEc-CCCCcH-HHHHHHHHHHH--cCCeEEEEEcCCCCccccccCeeEEcccCC
Q psy1915 129 FRDDVCFFIS-QSGETA-DSLMALRYCKA--RGALIVGVTNTVGSSISRESHCGIHINAGP 185 (361)
Q Consensus 129 ~~~dlvI~iS-~SG~t~-e~~~a~~~ak~--~g~~~i~IT~~~~S~la~~ad~~l~~~~~~ 185 (361)
..-|++|.+- +..++. -...-+..++. +|+++|.|--. .++.++.||..|.+..|.
T Consensus 177 ~~ad~il~~G~N~~~~~p~~~~~i~~a~~~~~G~klivIDPr-~t~ta~~AD~~l~irPGt 236 (802)
T 3ml1_A 177 EAADAFVLWGSNMAEMHPILWTRVTDRRLSHPKTRVVVLSTF-THRCFDLADIGIIFKPQT 236 (802)
T ss_dssp GTCSEEEEESCCHHHHSHHHHHHHHHHHHHSTTCEEEEEESS-BCGGGGTCSEEEECCTTT
T ss_pred hhCCEEEEECCChHHhChHHHHHHHHHHHhcCCCEEEEEeCC-CCchhHHhccEeccCCCH
Confidence 3456766663 333322 22333444543 69999988765 688899999998886543
No 179
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=21.24 E-value=81 Score=24.54 Aligned_cols=27 Identities=4% Similarity=0.084 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHcCCeEEEEEcCCCC
Q psy1915 143 TADSLMALRYCKARGALIVGVTNTVGS 169 (361)
Q Consensus 143 t~e~~~a~~~ak~~g~~~i~IT~~~~S 169 (361)
.+++.++++.++++|.+++.+|+++..
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~ 64 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSA 64 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcH
Confidence 466789999999999999999987543
No 180
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=20.98 E-value=1.4e+02 Score=28.72 Aligned_cols=15 Identities=20% Similarity=-0.031 Sum_probs=12.3
Q ss_pred cCCcEEEEecccccc
Q psy1915 74 RGSPLLVGIKTKTRL 88 (361)
Q Consensus 74 ~g~i~~~G~G~S~~~ 88 (361)
..+++++|.|.||.-
T Consensus 22 ~~~v~viGiG~sG~s 36 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMG 36 (494)
T ss_dssp CCEEEEETTTSTTHH
T ss_pred CCEEEEEEEcHhhHH
Confidence 358999999999863
No 181
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=20.95 E-value=1.2e+02 Score=26.34 Aligned_cols=50 Identities=16% Similarity=0.211 Sum_probs=38.0
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEE
Q psy1915 130 RDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIH 180 (361)
Q Consensus 130 ~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~ 180 (361)
+-|++|++-.|+...-.......++++|+++|.|- ...+++...+|+.|.
T Consensus 177 ~adlllviGTSl~V~P~~~l~~~a~~~g~~~i~IN-~~~~~~d~~~~~~i~ 226 (249)
T 1m2k_A 177 RADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEIN-PDETPLTPIADYSLR 226 (249)
T ss_dssp HCSEEEEESCCSCSTTGGGHHHHHHHTTCEEEEEC-SSCCTTGGGCSEEEC
T ss_pred cCCEEEEEccCCCccchHHHHHHHHHcCCeEEEEe-CCCCCCCcceeEEEe
Confidence 45899999988888767677788898899977654 556777777776653
No 182
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=20.90 E-value=1.9e+02 Score=26.15 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=29.2
Q ss_pred HHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcc
Q psy1915 146 SLMALRYCKARGALIVGVTNTVGSSISRESHCGIHIN 182 (361)
Q Consensus 146 ~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~ 182 (361)
....++.+++.|..++.+..++++|..+.+|..+..+
T Consensus 13 g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~ 49 (380)
T 3ax6_A 13 GKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAG 49 (380)
T ss_dssp HHHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECC
Confidence 4556677889999999999988888888888665543
No 183
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.75 E-value=1.5e+02 Score=22.28 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=31.7
Q ss_pred CEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCcccccc
Q psy1915 132 DVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRES 175 (361)
Q Consensus 132 dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~a 175 (361)
|+++.+ .......+-+.++.||++|..+..+-||.+..-.+.|
T Consensus 79 dvvviv-ttddkewikdfieeakergvevfvvynnkdddrrkea 121 (162)
T 2l82_A 79 DVVVIV-TTDDKEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEA 121 (162)
T ss_dssp CEEEEE-ECCCHHHHHHHHHHHHHTTCEEEEEEECSCHHHHHHH
T ss_pred cEEEEE-ecCcHHHHHHHHHHHHhcCcEEEEEecCCCchhHHHH
Confidence 444443 3456778889999999999999999998766544444
No 184
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=20.74 E-value=95 Score=25.34 Aligned_cols=36 Identities=17% Similarity=0.029 Sum_probs=27.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCC
Q psy1915 134 CFFISQSGETADSLMALRYCKARGALIVGVTNTVGS 169 (361)
Q Consensus 134 vI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S 169 (361)
+.+.-.||+|...++.+..+..+|-+++.++...+.
T Consensus 8 i~G~~gsGKTT~ll~~~~~~~~~g~~v~~~~~~~d~ 43 (184)
T 2orw_A 8 ITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPKIDS 43 (184)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHTTCEEEEEEEC---
T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCeEEEEeecccc
Confidence 444458999999999999998889999988876554
No 185
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=20.22 E-value=4.1e+02 Score=22.74 Aligned_cols=20 Identities=20% Similarity=0.210 Sum_probs=17.0
Q ss_pred HHHHHHHHcCCcEEEEecCC
Q psy1915 321 NALLQVIARDGRPIVICEKG 340 (361)
Q Consensus 321 ~~~~~~~~~g~~~v~I~~~~ 340 (361)
.++.|+...|.++|++.+..
T Consensus 171 ~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 171 TALRECITLGIPTICLIDTN 190 (231)
T ss_dssp HHHHHHHTTTCCEEECCCSS
T ss_pred HHHHHHHHhCCCEEEEecCC
Confidence 47888888999999998764
No 186
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=20.06 E-value=98 Score=26.79 Aligned_cols=50 Identities=10% Similarity=-0.023 Sum_probs=38.5
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEE
Q psy1915 130 RDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIH 180 (361)
Q Consensus 130 ~~dlvI~iS~SG~t~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~ 180 (361)
+-|++|++-.|+...-.....+.++++|+++|.|- ...+++...+|+.|.
T Consensus 180 ~adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~IN-~~~~~~d~~~~~~i~ 229 (246)
T 1yc5_A 180 RASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVN-LGETPFDDIATLKYN 229 (246)
T ss_dssp HCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEC-SSCCTTGGGCSEEEC
T ss_pred cCCEEEEECCCCcchhHHHHHHHHHHcCCeEEEEe-CCCCCCCcceeEEEe
Confidence 45999999989888777777888888899977655 556777777777654
Done!