BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1919
(737 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZJ3|A Chain A, Isomerase Domain Of Human Glucose:fructose-6-Phosphate
Amidotransferase
pdb|2ZJ4|A Chain A, Isomerase Domain Of Human Glucose:fructose-6-Phosphate
Amidotransferase
Length = 375
Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust.
Identities = 231/298 (77%), Positives = 268/298 (89%), Gaps = 1/298 (0%)
Query: 426 QEIMKGNYSYFMQKEIFEQPESVVNTMRGRINFETNSVILGGIKDYIPEIRRCRRLMMIG 485
Q+IMKGN+S FMQKEIFEQPESVVNTMRGR+NF+ +V LGG+KD+I EI+RCRRL++I
Sbjct: 8 QQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRCRRLILIA 67
Query: 486 CGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMAL 545
CGTSYH+ VATRQ+LEELTELPVMVELASDFLDRNTPVFRDDVCFF+SQSGETAD+LM L
Sbjct: 68 CGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMGL 127
Query: 546 RYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMC 605
RYCK RGAL VG+TNTVGSSISRE+ CG+HINAGPEIGVASTKAYTSQF+SLVMFAL+MC
Sbjct: 128 RYCKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFALMMC 187
Query: 606 EDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGGYNYATC 665
+DRIS+Q RR EI+ GLK + + I+EVL MD E+Q+LA E+Y QKS+L+MGR GY+YATC
Sbjct: 188 DDRISMQERRKEIMLGLKRLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGR-GYHYATC 246
Query: 666 MEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVI 723
+EGALKIKE+TYMHSEGI+AGELKHGPLAL+D MPVIMI+ RD Y KC NAL QV+
Sbjct: 247 LEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVV 304
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 245 QEIMKGNYSYFMQKEIFEQPESVVNTMRGRINFETNSVILGGIKRKIR 292
Q+IMKGN+S FMQKEIFEQPESVVNTMRGR+NF+ +V LGG+K I+
Sbjct: 8 QQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIK 55
>pdb|2V4M|A Chain A, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|B Chain B, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|C Chain C, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|D Chain D, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
Length = 376
Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust.
Identities = 231/298 (77%), Positives = 268/298 (89%), Gaps = 1/298 (0%)
Query: 426 QEIMKGNYSYFMQKEIFEQPESVVNTMRGRINFETNSVILGGIKDYIPEIRRCRRLMMIG 485
Q+IMKGN+S FMQKEIFEQPESVVNTMRGR+NF+ +V LGG+KD+I EI+RCRRL++I
Sbjct: 9 QQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRCRRLILIA 68
Query: 486 CGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMAL 545
CGTSYH+ VATRQ+LEELTELPVMVELASDFLDRNTPVFRDDVCFF+SQSGETAD+LM L
Sbjct: 69 CGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMGL 128
Query: 546 RYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMC 605
RYCK RGAL VG+TNTVGSSISRE+ CG+HINAGPEIGVASTKAYTSQF+SLVMFAL+MC
Sbjct: 129 RYCKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFALMMC 188
Query: 606 EDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGGYNYATC 665
+DRIS+Q RR EI+ GLK + + I+EVL MD E+Q+LA E+Y QKS+L+MGR GY+YATC
Sbjct: 189 DDRISMQERRKEIMLGLKRLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGR-GYHYATC 247
Query: 666 MEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQVI 723
+EGALKIKE+TYMHSEGI+AGELKHGPLAL+D MPVIMI+ RD Y KC NAL QV+
Sbjct: 248 LEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVV 305
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 245 QEIMKGNYSYFMQKEIFEQPESVVNTMRGRINFETNSVILGGIKRKIR 292
Q+IMKGN+S FMQKEIFEQPESVVNTMRGR+NF+ +V LGG+K I+
Sbjct: 9 QQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIK 56
>pdb|2POC|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUW|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-phosphate Synthase From Candida Albicans
pdb|2PUW|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-phosphate Synthase From Candida Albicans
Length = 367
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/295 (64%), Positives = 243/295 (82%), Gaps = 2/295 (0%)
Query: 429 MKGNYSYFMQKEIFEQPESVVNTMRGRINFETNSVILGGIKDYIPEIRRCRRLMMIGCGT 488
MKG Y +FMQKEIFEQP+S NTMRGRI+FE V LGG+K ++ IRRCRR++MI CGT
Sbjct: 1 MKGPYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGT 60
Query: 489 SYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYC 548
SYHS +ATR + EELTE+PV VELASDFLDR +PVFRDD C F+SQSGETADS++AL+YC
Sbjct: 61 SYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYC 120
Query: 549 KARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCEDR 608
RGAL VG+ N+VGSS+SR++HCG+HINAGPEIGVASTKAYTSQ+I+LVMFAL + D
Sbjct: 121 LERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDS 180
Query: 609 ISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAK-EMYEQKSMLLMGRGGYNYATCME 667
IS + R EIIKGL+ I EQI++VL+++++++ L + +QKS+LL+GR GY +AT +E
Sbjct: 181 ISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGR-GYQFATALE 239
Query: 668 GALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQV 722
GALKIKE++YMHSEG++AGELKHG LAL+D +P+I TRD ++ K M+A+ QV
Sbjct: 240 GALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQV 294
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 33/41 (80%)
Query: 248 MKGNYSYFMQKEIFEQPESVVNTMRGRINFETNSVILGGIK 288
MKG Y +FMQKEIFEQP+S NTMRGRI+FE V LGG+K
Sbjct: 1 MKGPYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLK 41
>pdb|1JXA|A Chain A, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|1JXA|B Chain B, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|1JXA|C Chain C, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|2BPL|A Chain A, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
pdb|2BPL|B Chain B, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
pdb|2BPL|C Chain C, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
Length = 608
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 206/346 (59%), Gaps = 20/346 (5%)
Query: 368 EYFFASDASAVIEHTNRVIFLEDDDVAAVKDGSLSIHRLRRSLDDPHGREITILKLEIQE 427
E F ASD A++ T R IFLE+ D+A + S++I D G E+ + +I+
Sbjct: 186 ENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIF-------DKTGAEVK--RQDIES 236
Query: 428 IM------KGNYSYFMQKEIFEQPESVVNTMRGRINF-ETNSVILGGIKDYIPEIRRCRR 480
+ KG Y ++MQKEI+EQP ++ NT+ GRI+ + + LG D + + +
Sbjct: 237 NLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADEL--LSKVEH 294
Query: 481 LMMIGCGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETAD 540
+ ++ CGTSY+S + +R E L +P VE+AS+F R + V R+ + +SQSGETAD
Sbjct: 295 IQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETAD 354
Query: 541 SLMALRYCKARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVM 599
+L LR K G L + + N GSS+ RES + NAG EIGVASTKA+T+Q L+M
Sbjct: 355 TLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLM 414
Query: 600 FALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGG 659
+ + + + ++I+ GL+ + +I ++L D ++ LA++ ++ L +GRG
Sbjct: 415 LVAKLSKLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGD 474
Query: 660 YNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 705
Y +EGALK+KE++Y+H+E AGELKHGPLALID MPVI++
Sbjct: 475 -QYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVV 519
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 46/208 (22%)
Query: 10 DGVDIAIVKKSGKVSALEDEIQTRLKELNVEESSA-THVGIAHTRWATHGAPSEVNSHPQ 68
D +A+V G ++ L + ++ EE GIAHTRWATHG PSEVN+HP
Sbjct: 29 DSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPH 88
Query: 69 RSDIDQTFCVVHNGIVTNYKELK-------------------AFLTNKDHRPHG--RSET 107
+ + VVHNGI+ N++ L+ A L N + + G R
Sbjct: 89 ---VSEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAV 145
Query: 108 MPMLPRNDSTSEFQPLEDKQV-------------------EYFFASDASAVIEHTNRVIF 148
+ +P+ ++ + E F ASD A++ T R IF
Sbjct: 146 LRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIF 205
Query: 149 LERFDRGNCNCQSLTV-PKSKKE-RRQD 174
LE D +S+ + K+ E +RQD
Sbjct: 206 LEEGDIAEITRRSVNIFDKTGAEVKRQD 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 249 KGNYSYFMQKEIFEQPESVVNTMRGRIN 276
KG Y ++MQKEI+EQP ++ NT+ GRI+
Sbjct: 245 KGIYRHYMQKEIYEQPNAIKNTLTGRIS 272
>pdb|2J6H|A Chain A, E. Coli Glucosamine-6-p Synthase In Complex With
Glucose-6p And 5-oxo-l-norleucine
pdb|2J6H|B Chain B, E. Coli Glucosamine-6-p Synthase In Complex With
Glucose-6p And 5-oxo-l-norleucine
pdb|2VF4|X Chain X, E. Coli Glucosamine-6-P Synthase
pdb|2VF5|X Chain X, Glucosamine-6-Phosphate Synthase In Complex With
Glucosamine-6-Phosphate
Length = 608
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 205/346 (59%), Gaps = 20/346 (5%)
Query: 368 EYFFASDASAVIEHTNRVIFLEDDDVAAVKDGSLSIHRLRRSLDDPHGREITILKLEIQE 427
E F ASD A++ T R IFLE+ D+A + S++I D G E+ + +I+
Sbjct: 186 ENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIF-------DKTGAEVK--RQDIES 236
Query: 428 IM------KGNYSYFMQKEIFEQPESVVNTMRGRINF-ETNSVILGGIKDYIPEIRRCRR 480
+ KG Y ++MQKEI+EQP ++ NT+ GRI+ + + LG D + + +
Sbjct: 237 NLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADEL--LSKVEH 294
Query: 481 LMMIGCGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETAD 540
+ ++ CGTSY+S + +R E L +P VE+AS+F R + V R+ + +SQSGETAD
Sbjct: 295 IQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETAD 354
Query: 541 SLMALRYCKARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVM 599
+L LR K G L + + N GSS+ RES + NAG EIGVASTKA+T+Q L+M
Sbjct: 355 TLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLM 414
Query: 600 FALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGG 659
+ + + ++I+ GL+ + +I ++L D ++ LA++ ++ L +GRG
Sbjct: 415 LVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGD 474
Query: 660 YNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 705
Y +EGALK+KE++Y+H+E AGELKHGPLALID MPVI++
Sbjct: 475 -QYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVV 519
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 46/208 (22%)
Query: 10 DGVDIAIVKKSGKVSALEDEIQTRLKELNVEESSA-THVGIAHTRWATHGAPSEVNSHPQ 68
D +A+V G ++ L + ++ EE GIAHTRWATHG PSEVN+HP
Sbjct: 29 DSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPH 88
Query: 69 RSDIDQTFCVVHNGIVTNYKELK-------------------AFLTNKDHRPHG--RSET 107
+ + VVHNGI+ N++ L+ A L N + + G R
Sbjct: 89 ---VSEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAV 145
Query: 108 MPMLPRNDSTSEFQPLEDKQV-------------------EYFFASDASAVIEHTNRVIF 148
+ +P+ ++ + E F ASD A++ T R IF
Sbjct: 146 LRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIF 205
Query: 149 LERFDRGNCNCQSLTV-PKSKKE-RRQD 174
LE D +S+ + K+ E +RQD
Sbjct: 206 LEEGDIAEITRRSVNIFDKTGAEVKRQD 233
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 249 KGNYSYFMQKEIFEQPESVVNTMRGRIN 276
KG Y ++MQKEI+EQP ++ NT+ GRI+
Sbjct: 245 KGIYRHYMQKEIYEQPNAIKNTLTGRIS 272
>pdb|3OOJ|A Chain A, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|B Chain B, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|C Chain C, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|D Chain D, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|E Chain E, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|F Chain F, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|G Chain G, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|H Chain H, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
Length = 608
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 206/348 (59%), Gaps = 24/348 (6%)
Query: 368 EYFFASDASAVIEHTNRVIFLEDDDVAAVKDGSLSIHRLRRSLD--DPHGREITILKLEI 425
E F ASD A++ T R IFLE+ D+A + RRS++ D G E+ + +I
Sbjct: 186 ENFIASDQLALLPVTRRFIFLEEGDIAEIT---------RRSVNIFDKTGAEVK--RQDI 234
Query: 426 QEIM------KGNYSYFMQKEIFEQPESVVNTMRGRINF-ETNSVILGGIKDYIPEIRRC 478
+ + KG Y ++MQKEI+EQP ++ NT+ GRI+ + + LG D + + +
Sbjct: 235 ESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADEL--LSKV 292
Query: 479 RRLMMIGCGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGET 538
+ ++ CGTSY+S + +R E L +P VE+AS+F R + V R+ + +SQSGET
Sbjct: 293 EHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGET 352
Query: 539 ADSLMALRYCKARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISL 597
AD+L LR K G L + + N GSS+ RES + NAG EIGVASTKA+T+Q L
Sbjct: 353 ADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVL 412
Query: 598 VMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGR 657
+M + + + ++I+ GL+ + +I ++L D ++ LA++ ++ L +GR
Sbjct: 413 LMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGR 472
Query: 658 GGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 705
G Y +EGALK+KE++Y+H+E AGELKHGPLALID MPVI++
Sbjct: 473 GD-QYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVV 519
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 46/208 (22%)
Query: 10 DGVDIAIVKKSGKVSALEDEIQTRLKELNVEESSA-THVGIAHTRWATHGAPSEVNSHPQ 68
D +A+V G ++ L + ++ EE GIAHTRWATHG PSEVN+HP
Sbjct: 29 DSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPH 88
Query: 69 RSDIDQTFCVVHNGIVTNYKELK-------------------AFLTNKDHRPHG--RSET 107
+ + VVHNGI+ N++ L+ A L N + + G R
Sbjct: 89 ---VSEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAV 145
Query: 108 MPMLPRNDSTSEFQPLEDKQV-------------------EYFFASDASAVIEHTNRVIF 148
+ +P+ ++ + E F ASD A++ T R IF
Sbjct: 146 LRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIF 205
Query: 149 LERFDRGNCNCQSLTV-PKSKKE-RRQD 174
LE D +S+ + K+ E +RQD
Sbjct: 206 LEEGDIAEITRRSVNIFDKTGAEVKRQD 233
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 249 KGNYSYFMQKEIFEQPESVVNTMRGRIN 276
KG Y ++MQKEI+EQP ++ NT+ GRI+
Sbjct: 245 KGIYRHYMQKEIYEQPNAIKNTLTGRIS 272
>pdb|1MOS|A Chain A, Isomerase Domain Of Glucosamine 6-phosphate Synthase
Complexed With 2- Amino-2-deoxyglucitol 6-phosphate
pdb|1MOQ|A Chain A, Isomerase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glucosamine 6-Phosphate
pdb|1MOR|A Chain A, Isomerase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glucose 6-Phosphate
Length = 368
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 173/278 (62%), Gaps = 5/278 (1%)
Query: 430 KGNYSYFMQKEIFEQPESVVNTMRGRINF-ETNSVILGGIKDYIPEIRRCRRLMMIGCGT 488
KG Y ++MQKEI+EQP ++ NT+ GRI+ + + LG D + + + + ++ CGT
Sbjct: 5 KGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADEL--LSKVEHIQILACGT 62
Query: 489 SYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYC 548
SY+S + +R E L +P VE+AS+F R + V R+ + +SQSGETAD+L LR
Sbjct: 63 SYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLS 122
Query: 549 KARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMCED 607
K G L + + N GSS+ RES + NAG EIGVASTKA+T+Q L+M +
Sbjct: 123 KELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRL 182
Query: 608 RISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGGYNYATCME 667
+ + ++I+ GL+ + +I ++L D ++ LA++ ++ L +GRG Y +E
Sbjct: 183 KGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGD-QYPIALE 241
Query: 668 GALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 705
GALK+KE++Y+H+E AGELKHGPLALID MPVI++
Sbjct: 242 GALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVV 279
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 249 KGNYSYFMQKEIFEQPESVVNTMRGRIN 276
KG Y ++MQKEI+EQP ++ NT+ GRI+
Sbjct: 5 KGIYRHYMQKEIYEQPNAIKNTLTGRIS 32
>pdb|3TBF|A Chain A, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|B Chain B, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|C Chain C, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|D Chain D, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|E Chain E, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|F Chain F, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|G Chain G, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|H Chain H, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis
Length = 372
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 176/298 (59%), Gaps = 10/298 (3%)
Query: 430 KGNYSYFMQKEIFEQPESVVNTMRGRINFETNSVILGGIKDYIPEI-RRCRRLMMIGCGT 488
K Y ++ KEI+EQPE+V NT+ + + L E+ + + + ++ CGT
Sbjct: 7 KDGYKHYXLKEIYEQPEAVSNTILA--SLADGEISLDSFDKRAKELFEKTKHICIVACGT 64
Query: 489 SYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADSLMALRYC 548
SY++ + +E+ ++P VE+AS+ R+ V + ISQSGETAD+L +LR
Sbjct: 65 SYNAGXTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKS 124
Query: 549 KARGALIVG---VTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVMFALVMC 605
K + VG + N SS+ RES AG EIGVASTKA+T+Q ++L +F LV+
Sbjct: 125 KKQN--YVGSXCICNVPNSSLVRESDIAFXTKAGVEIGVASTKAFTTQLVALAIFTLVIA 182
Query: 606 EDRISLQTRR-NEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLMGRGGYNYAT 664
+ + SL ++ + + LK I + L++D+E+ Q+++ +++ + +GRG Y Y
Sbjct: 183 KLKNSLTDQQIAKYTEELKNIRALVXGALKLDTEIDQISEYFSDKEHTIFLGRGLY-YPI 241
Query: 665 CMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVYVKCMNALLQV 722
+EGALK+KE++Y+H+E +GELKHGPLAL+D + P++ ++ D + K ++ L +V
Sbjct: 242 AIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNXPIVAVVPNDELLDKTLSNLQEV 299
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 249 KGNYSYFMQKEIFEQPESVVNTM 271
K Y ++ KEI+EQPE+V NT+
Sbjct: 7 KDGYKHYXLKEIYEQPEAVSNTI 29
>pdb|3HBA|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Sden_2705) From Shewanella Denitrificans Os217 At 2.00
A Resolution
pdb|3HBA|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Sden_2705) From Shewanella Denitrificans Os217 At 2.00
A Resolution
Length = 334
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 12/237 (5%)
Query: 477 RCRRLMMIGCGTSYHSAVATRQLLEELTELPVMVELAS-DFLDRNTPVFRDDVCFFISQS 535
+ + + ++G G+S H+ V + L E +P S + T + ISQS
Sbjct: 41 KPKFVXIVGRGSSDHAGVFAKYLFEIEASIPTFAAAPSVASVYGKTLKLAGGLVIVISQS 100
Query: 536 GETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFI 595
G + D L R K GA V + N + I I + AG E VA+TK+Y +
Sbjct: 101 GRSPDILAQARXAKNAGAFCVALVNDETAPIKDIVDVVIPLRAGEEKAVAATKSYLATLS 160
Query: 596 SLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLLM 655
+L+ A ++ SL N + + L+ +D+E Q A + + K+++++
Sbjct: 161 ALLQVAAKWTQNE-SLVEAVNSLPQALQA---------AVDAEPQLRAGSLTDVKNLVVL 210
Query: 656 GRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPVY 712
GRG + YA E ALK+KE+ +H+E + E HGP+ L++ + ++ + RD Y
Sbjct: 211 GRG-FGYAVSKEIALKLKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILDVCIRDESY 266
>pdb|3FJ1|A Chain A, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|B Chain B, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|C Chain C, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|D Chain D, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
Length = 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 528 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVAST 587
+C +SQSG++ D + R GAL V +TN S ++ S I I+AGPE+ VA+T
Sbjct: 94 LCLAVSQSGKSPDIVAXTRNAGRDGALCVALTNDAASPLAGVSAHTIDIHAGPELSVAAT 153
Query: 588 KAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQ--QLAKE 645
K + + ++ + ED GL+ + E L S + +
Sbjct: 154 KTFVTSAVAGLXLLADWAED------------DGLRAALGNLPETLAAASRIDWPEXRVA 201
Query: 646 MYEQKSMLLMGRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 705
+ + S+ +GR G + A E ALK KE +H+E + E+ HGP+++++ PV+
Sbjct: 202 IGARPSLFTLGR-GTSLAVSNEAALKFKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGF 260
Query: 706 LTRD 709
D
Sbjct: 261 AAGD 264
>pdb|3EUA|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|C Chain C, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|D Chain D, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|E Chain E, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|F Chain F, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|G Chain G, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|H Chain H, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 13/234 (5%)
Query: 481 LMMIGCGTSYHSAVATRQLLE-ELTELPVMVELASDFLDRNTPVFRDDVCFFI--SQSGE 537
+ + CG S ++ + + E + + A++F+ RN PV + I S SG
Sbjct: 28 VFFVACGGSSAIXYPSKYVFDRESKSINSDLYSANEFIQRN-PVQLGEKSLVILCSHSGN 86
Query: 538 TADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISL 597
T +++ A + + +GAL + T S +++E+ + G E +T +
Sbjct: 87 TPETVKAAAFARGKGALTIAXTFKPESPLAQEAQYVAQYDWGDEALAINTN--YGVLYQI 144
Query: 598 VMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSE-VQQLAKEMYEQKSMLLMG 656
V L + E+ T+ + I+GL + + L+ +++ +Q AK +E++S++
Sbjct: 145 VFGTLQVLENN----TKFEQAIEGLDQLQAVYEKALKQEADNAKQFAK-AHEKESIIYTX 199
Query: 657 RGGYNYATCMEGALKI-KELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRD 709
G NY ++ I E ++HS I AGE HGP +ID S+P I++L D
Sbjct: 200 ASGANYGVAYSYSICILXEXQWIHSHAIHAGEYFHGPFEIIDESVPFIILLGLD 253
>pdb|1XFF|A Chain A, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glutamate
pdb|1XFF|B Chain B, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glutamate
pdb|1XFG|A Chain A, Glutaminase Domain Of Glucosamine 6-phosphate Synthase
Complexed With L-glu Hydroxamate
pdb|1XFG|B Chain B, Glutaminase Domain Of Glucosamine 6-phosphate Synthase
Complexed With L-glu Hydroxamate
Length = 240
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 46/208 (22%)
Query: 10 DGVDIAIVKKSGKVSALEDEIQTRLKELNVEESSA-THVGIAHTRWATHGAPSEVNSHPQ 68
D +A+V G ++ L + ++ EE GIAHTRWATHG PSEVN+HP
Sbjct: 29 DSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPH 88
Query: 69 RSDIDQTFCVVHNGIVTNYKELK-------------------AFLTNKDHRPHG--RSET 107
+ + VVHNGI+ N++ L+ A L N + + G R
Sbjct: 89 ---VSEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAV 145
Query: 108 MPMLPRNDSTSEFQPLEDKQV-------------------EYFFASDASAVIEHTNRVIF 148
+ +P+ ++ + E F ASD A++ T R IF
Sbjct: 146 LRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIF 205
Query: 149 LERFDRGNCNCQSLTV-PKSKKE-RRQD 174
LE D +S+ + K+ E +RQD
Sbjct: 206 LEEGDIAEITRRSVNIFDKTGAEVKRQD 233
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 368 EYFFASDASAVIEHTNRVIFLEDDDVAAVKDGSLSI 403
E F ASD A++ T R IFLE+ D+A + S++I
Sbjct: 186 ENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNI 221
>pdb|2A3N|A Chain A, Crystal Structure Of A Putative
Glucosamine-fructose-6-phosphate Aminotransferase
(stm4540.s) From Salmonella Typhimurium Lt2 At 1.35 A
Resolution
Length = 355
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 102/232 (43%), Gaps = 21/232 (9%)
Query: 481 LMMIGCGTSYHSAVATRQLLEELTELPVMVELASDFLDR-NTPVFRDDVCFFISQSGETA 539
L G S A + +ELT LPV VE A++ + + N + +D V +S+SG+T
Sbjct: 57 LFFASVGGSLAPXXAINEFAKELTTLPVYVEQAAELIHKGNKRLNKDSVVITLSKSGDTK 116
Query: 540 DSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVM 599
+S+ +CKA+G +V +T S +++ + HI + GV Y + +
Sbjct: 117 ESVAIAEWCKAQGIRVVAITKNADSPLAQAATW--HIPXRHKNGV----EYEYXLLYWLF 170
Query: 600 FALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQ-MDSEVQQLAKEMYEQKSMLLMGRG 658
F ++ + + R L+++ + + Q D + +A + +G
Sbjct: 171 FRVLSRNNEFASYDR---FASQLEILPANLLKAKQKFDPQADAIASRYHNSDYXXWVGGA 227
Query: 659 G-----YNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 705
Y ++ C+ ++E + + + + E HG L L++ +P+I++
Sbjct: 228 EXWGEVYLFSXCI-----LEEXQWKRTRPVSSAEFFHGALELLEKDVPLILV 274
>pdb|3FKJ|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Stm_0572) From Salmonella Typhimurium Lt2 At 2.12 A
Resolution
pdb|3FKJ|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Stm_0572) From Salmonella Typhimurium Lt2 At 2.12 A
Resolution
Length = 347
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query: 480 RLMMIGCGTSYHSAVATRQLLE-ELTELPVMVELASDFLDRNTP--VFRDDVCFFISQSG 536
R+ +GCG S + L+ E ++L V +++F+ TP + ++ V SQ G
Sbjct: 42 RVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYITSNEFV-HATPKALGKNSVVILASQQG 100
Query: 537 ETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAG--PE-IGVASTKAYTSQ 593
TA+++ A R + +GA +G+ + + S I PE + A KA S
Sbjct: 101 NTAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQWARYPETVDPAQQKAAYSL 160
Query: 594 FISLVMFA----LVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQ 649
+++L + A ++ +S R ++++ G + Q+ + Q+ A E ++
Sbjct: 161 WLALEILAQTEGYAQYDELVSAFGRFSDVVHGAQ---------RQVQEDAQRFAAEWKDE 211
Query: 650 KSMLLMGRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMI 705
K + G G A E + E +++S I +GE HGP + + P I++
Sbjct: 212 KVVYXXGSGPSFGAAHQESICILLEXQWINSASIHSGEYFHGPFEITEPGTPFILL 267
>pdb|3G68|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(cd3275) From Clostridium Difficile 630 At 1.80 A
Resolution
pdb|3G68|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(cd3275) From Clostridium Difficile 630 At 1.80 A
Resolution
Length = 352
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 21/259 (8%)
Query: 474 EIRRC--RRLMMIGCGTSYHSAVATRQLLEELTELPV-------MVELASDFLDRNTPVF 524
E++R +++++ G GTSYHS V + L+ L ++ V + E F + NT V
Sbjct: 28 EVKRTNLKKIIITGSGTSYHSGVQVQPYLQNLLDIDVVKXYPFXITEDTFKFDNENTLVV 87
Query: 525 RDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGV 584
+SQ G + + A + + +G I + I S + +N G E
Sbjct: 88 G------VSQGGSSYSTYNAXKLAEDKGCKIASXAGCKNALIDEISDYILTVNCGEEKSG 141
Query: 585 ASTKAYTSQFISLVMFALVMCEDR--ISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQL 642
A TK Y ++L + L + ++ IS + EI K L I+ + V ++ + +
Sbjct: 142 AKTKGYYCTKLNLXLLGLQIAREKGIISSEKYNEEINKILDAIN-RFEAVYKLSKQWIER 200
Query: 643 AKE-MYEQKSMLLMGRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMP 701
KE + K + ++G Y +E ALK+ E + G E HG I++
Sbjct: 201 NKEKLVNSKEIRIIGHSDI-YGDTLEAALKLLETXRIPVTGYEFEEFIHGIYNAINSDST 259
Query: 702 VIMILT-RDPVYVKCMNAL 719
+ ++ T ++P K ++ L
Sbjct: 260 IFILDTGKEPRVTKXIDVL 278
>pdb|3KNZ|A Chain A, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|B Chain B, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|C Chain C, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|D Chain D, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|E Chain E, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|F Chain F, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
Length = 366
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 3/218 (1%)
Query: 476 RRCRRLMMIGCGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQS 535
R R+++ G GTSYH A+ R + LPV V D + ISQ
Sbjct: 48 RGVTRIILTGSGTSYHGALTARTFXQRWCALPVDVCWPFXLDDETLARSGKALVVGISQG 107
Query: 536 GETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAY--TSQ 593
G + +L A + G + ++I R + + + G E A TK Y T
Sbjct: 108 GGSLSTLAAXERARNVGHITASXAGVAPATIDRAADYILTVPCGEETAGAKTKGYHCTVL 167
Query: 594 FISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSML 653
+ L+ A+ + R+ + RR+ +++ K + V + Q A + + +
Sbjct: 168 NLXLLALAVAGQQQRLDGEQRRSLLLRXEKTFNHLPALVTASQAWAQTNALALRDSADIR 227
Query: 654 LMGRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHG 691
L G + T EGALK E G E HG
Sbjct: 228 LTGPATL-FGTVQEGALKXLETLRCPVSGYEFEEFIHG 264
>pdb|3FXA|A Chain A, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|B Chain B, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|C Chain C, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|D Chain D, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
Length = 201
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 472 IPEIRRCR-RLMMIGCGTSYHSAVATRQLLEELT--ELPVMVELASDFLDRNTPVF-RDD 527
+ +I C ++++ GCGTS VA ++L+ E P + SD + V ++D
Sbjct: 38 VEKIAECTGKIVVAGCGTS---GVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKED 94
Query: 528 VCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPE------ 581
+ IS+ G T + L + CK +G+ ++GVT S I++E+ ++ E
Sbjct: 95 ILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNX 154
Query: 582 IGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIH 626
+ AST A + F A+++C L T N + VIH
Sbjct: 155 LATASTXAVIASFD-----AVIVC-----LXTYXNYTKEQFSVIH 189
>pdb|2DEC|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DEC|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DF8|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With
Beta-D-Fructopyranose-1-Phosphate
pdb|2DF8|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With
Beta-D-Fructopyranose-1-Phosphate
pdb|2E5F|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With Phosphate Ion
pdb|2E5F|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With Phosphate Ion
Length = 325
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 37/252 (14%)
Query: 464 ILGGIKDYIPEIRRCRRLMMIGCGTSYHSAVATRQLLEELTELPVMVELA---SDFL--D 518
+ +KD +I R++ +GCG+S+ + +LL +T + + +A S+FL
Sbjct: 20 VFNKVKD---KISLPNRILYLGCGSSHFLS----KLLAMVTNMHGGLGIALPCSEFLYSK 72
Query: 519 RNTPVFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINA 578
P+ ++ IS+SGET + L+AL + +G+T T SS++R + + A
Sbjct: 73 ETYPIGEVELAVGISRSGETTEILLALEKINVKK---LGIT-TRESSLTRMCDYSLVVPA 128
Query: 579 GPEIGVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHE-QIREVLQMDS 637
E V T ++TS + + LQ R GL ++ +I + +
Sbjct: 129 IEE-SVVMTHSFTSFYFAY-------------LQLLRYSY--GLPPLNAGEISKATEKSL 172
Query: 638 EVQQLAKEMYEQ---KSMLLMGRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLA 694
E ++ +E+ E ++++ +G G Y +E +LK+KE++ SE E++HG A
Sbjct: 173 EYERYIREIVESFDFQNIIFLG-SGLLYPVALEASLKMKEMSIFWSEAYPTFEVRHGFKA 231
Query: 695 LIDNSMPVIMIL 706
+ D V++++
Sbjct: 232 IADEKTLVVLMV 243
>pdb|2CB0|A Chain A, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
From Pyrococcus Furiosus
pdb|2CB0|B Chain B, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
From Pyrococcus Furiosus
Length = 333
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 37/246 (15%)
Query: 468 IKDYIPEIRRCRRLMMIGCGTSYHSAVATRQLLEELTELPVMVELA---SDFL--DRNTP 522
+KD +IR RR++ +GCG+S+ A +LL +T +A S+FL P
Sbjct: 24 VKD---KIRLPRRILYLGCGSSHFLA----KLLAXVTNXHGGTGVALPCSEFLYSKEAYP 76
Query: 523 VFRDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEI 582
+ + ++ IS+SGET + L+AL +G++ SS++R + + E
Sbjct: 77 IGKPELVVGISRSGETTEVLLALEKINTPK---LGIS-AYESSLTRACDYSLVVPTIEE- 131
Query: 583 GVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHE-QIREVLQMDSEVQQ 641
V T ++T+ + + LQ R+ GL ++ ++ + + E +
Sbjct: 132 SVVXTHSFTAFYFAY-------------LQLLRHSY--GLPLLEATEVAKATEKALEYEN 176
Query: 642 LAKEMYEQ---KSMLLMGRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDN 698
KE+ E ++++ +G G Y +E +LK KE SE E++HG A+ D
Sbjct: 177 YIKEIVEDFDFQNVIFLG-SGLLYPVALEASLKXKEXAIFWSEAYPTFEVRHGFKAIADE 235
Query: 699 SMPVIM 704
+ V++
Sbjct: 236 NTLVVL 241
>pdb|2AML|A Chain A, Crystal Structure Of Lmo0035 Protein (46906266) From
Listeria Monocytogenes 4b F2365 At 1.50 A Resolution
pdb|2AML|B Chain B, Crystal Structure Of Lmo0035 Protein (46906266) From
Listeria Monocytogenes 4b F2365 At 1.50 A Resolution
Length = 373
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 478 CRRLMMIGCGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGE 537
+ +++ G+S ++A + + +E L ++ + +E + L D+ ISQSG+
Sbjct: 50 AKEWLILATGSSLNAAQSAKYYIENLADVRITIEEPFNHLYYEKLSSHLDLVIGISQSGQ 109
Query: 538 TADSLMALRYCKARGAL-IVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFIS 596
+ ++ AL K ++ +V +T+ V S I+ + + I +G E TK +T+ ++
Sbjct: 110 STSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLT 169
Query: 597 LVMFALVMCEDRISLQTRR--NEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSMLL 654
L + L + + R NEI + I + + ++ ++ +E
Sbjct: 170 LXLTGLHFAYKTVQIDETRFNNEISAFSRAIDAIPATIAETEAFYERWQEEFATAPKFTA 229
Query: 655 MGRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVIMILTRDPV 711
+G G TC E K E + S+G+ HGP ++ + + T V
Sbjct: 230 IGYGP-TVGTCKEFETKFSETVRVPSQGLDLEAFXHGPYLEVNPQHRIFFLETASAV 285
>pdb|1J5X|A Chain A, Crystal Structure Of Glucosamine-6-Phosphate Deaminase
(Tm0813) From Thermotoga Maritima At 1.8 A Resolution
Length = 342
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 26/230 (11%)
Query: 481 LMMIGCGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPVFRD-DVCFFISQSGETA 539
++ +GCG+SY+ A+ E + ++ A + + P + + F S++G T
Sbjct: 55 VLFVGCGSSYNLALTISYYFERVLKIRTKAIPAGEVAFQKIPDLEERGLAFLFSRTGNTT 114
Query: 540 DSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEIGVASTKAYTSQFISLVM 599
+ L+A K R +G+T S +++ES + E + TK+++ +SL
Sbjct: 115 EVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFPVREE-AIVXTKSFSXILLSLXF 173
Query: 600 FALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQLAKEMYEQKSM------L 653
A D+I+ + E+ E++ E ++ ++ E+ + +
Sbjct: 174 LA-----DKIAGNST------------ERFSELVGYSPEFFDISWKVIEKIDLKEHDHFV 216
Query: 654 LMGRGGYNYATCMEGALKIKELTYMHSEGIMAGELKHGPLALIDNSMPVI 703
+G + + +E ALK E + SE E +HGP AL+ V
Sbjct: 217 FLGXSEF-FGVSLESALKCIEXSLTFSEAYSTLEYRHGPKALVKKGTLVF 265
>pdb|1ECF|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase
pdb|1ECF|B Chain B, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase
pdb|1ECG|A Chain A, Don Inactivated Escherichia Coli Glutamine
Phosphoribosylpyrophosphate (Prpp) Amidotransferase
pdb|1ECG|B Chain B, Don Inactivated Escherichia Coli Glutamine
Phosphoribosylpyrophosphate (Prpp) Amidotransferase
pdb|1ECB|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Gmp, 1 Mg Per
Subunit
pdb|1ECB|B Chain B, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Gmp, 1 Mg Per
Subunit
pdb|1ECB|C Chain C, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Gmp, 1 Mg Per
Subunit
pdb|1ECB|D Chain D, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Gmp, 1 Mg Per
Subunit
pdb|1ECC|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With Mn-Cprpp And
5-Oxo- Norleucine
pdb|1ECC|B Chain B, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With Mn-Cprpp And
5-Oxo- Norleucine
pdb|1ECJ|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Amp Per
Tetramer
pdb|1ECJ|B Chain B, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Amp Per
Tetramer
pdb|1ECJ|C Chain C, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Amp Per
Tetramer
pdb|1ECJ|D Chain D, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Amp Per
Tetramer
Length = 504
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 46 HVGIAHTRWATHGAPSEVNSHPQRSDIDQTFCVVHNGIVTNYKELKAFLTNKDHRPHGRS 105
++GI H R+ T G+ S + P + + HNG +TN EL+ L ++ R H +
Sbjct: 66 NMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLF-EEKRRHINT 124
Query: 106 ETMPMLPRNDSTSEFQPLEDKQVEYFFASDASAVIEHTNRVIFLERFDRGNCNCQSLTV 164
+ + N SE +E A + A I TNR+I RG C ++ +
Sbjct: 125 TSDSEILLNIFASELDNFRHYPLE---ADNIFAAIAATNRLI------RGAYACVAMII 174
>pdb|1NRI|A Chain A, Crystal Structure Of Putative Phosphosugar Isomerase
Hi0754 From Haemophilus Influenzae
Length = 306
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 525 RDDVCFFISQSGETADSLMALRYCKARGALIVGVTNTVGSSISRESHCGIHINAGPEI-- 582
++DV I+ SG T + L+Y K+ GAL + + + S + + I GPEI
Sbjct: 140 KNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEXAEIADIAIETIVGPEILT 199
Query: 583 GVASTKAYTSQ 593
G + K+ T+Q
Sbjct: 200 GSSRLKSGTAQ 210
>pdb|1AO0|A Chain A, Glutamine Phosphoribosylpyrophosphate (Prpp)
Amidotransferase From B. Subtilis Complexed With Adp And
Gmp
pdb|1AO0|B Chain B, Glutamine Phosphoribosylpyrophosphate (Prpp)
Amidotransferase From B. Subtilis Complexed With Adp And
Gmp
pdb|1AO0|C Chain C, Glutamine Phosphoribosylpyrophosphate (Prpp)
Amidotransferase From B. Subtilis Complexed With Adp And
Gmp
pdb|1AO0|D Chain D, Glutamine Phosphoribosylpyrophosphate (Prpp)
Amidotransferase From B. Subtilis Complexed With Adp And
Gmp
Length = 459
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 49 IAHTRWATHGAPSEVNSHPQ--RSDIDQTFCVVHNGIVTNYKELKAFLTNK 97
I H R+AT G N P RS + + + HNG + N +LK L N+
Sbjct: 68 IGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQLENQ 118
>pdb|1GPH|1 Chain 1, Structure Of The Allosteric Regulatory Enzyme Of Purine
Biosynthesis
pdb|1GPH|2 Chain 2, Structure Of The Allosteric Regulatory Enzyme Of Purine
Biosynthesis
pdb|1GPH|3 Chain 3, Structure Of The Allosteric Regulatory Enzyme Of Purine
Biosynthesis
pdb|1GPH|4 Chain 4, Structure Of The Allosteric Regulatory Enzyme Of Purine
Biosynthesis
Length = 465
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 49 IAHTRWATHGAPSEVNSHPQ--RSDIDQTFCVVHNGIVTNYKELKAFLTNK 97
I H R+AT G N P RS + + + HNG + N +LK L N+
Sbjct: 68 IGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQLENQ 118
>pdb|3C3J|A Chain A, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|B Chain B, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|C Chain C, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|D Chain D, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|E Chain E, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|F Chain F, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
Length = 384
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 583 GVASTKAYTSQFISLVMFALVMCEDRISLQTRRNEIIKGLKVIHEQIREVLQMDSEVQQL 642
G A T + T+ S + V + I+ QT R+ + ++ + +L + +
Sbjct: 169 GFAXTSSITTXXASCLA---VFAPETINSQTFRD--------VADRCQAILTSLGDFSEG 217
Query: 643 AKEMYEQKSMLLMGRGGYNYATCMEGALKIKELTYMHSEGIMAG------ELKHGPLALI 696
K ++ +G GG A E ALK+ ELT G +A +HGP +L+
Sbjct: 218 VFGYAPWKRIVYLGSGGLQGA-ARESALKVLELT----AGKLAAFYDSPTGFRHGPKSLV 272
Query: 697 DNSMPVIMILTRDP 710
D+ V++ ++ P
Sbjct: 273 DDETLVVVFVSSHP 286
>pdb|3B81|A Chain A, Crystal Structure Of Predicted Dna-Binding Transcriptional
Regulator Of TetrACRR FAMILY (NP_350189.1) FROM
CLOSTRIDIUM ACETOBUTYLICUM AT 2.10 A Resolution
Length = 203
Score = 29.6 bits (65), Expect = 6.6, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 369 YFFASD---ASAVIEHTNRVIFLEDDDVAAVKDGSLSIHRLRRSLDDPHGREITILKLEI 425
++F+S A A IE NRV F ++ + ++G SI RL++ L G +IT + ++
Sbjct: 50 HYFSSKEECADAAIE--NRVAFFSNEVLKESEEGLNSIERLKKIL--LAGIKITSVNEQV 105
Query: 426 QEIMKGNYSYFMQK 439
+EI + F QK
Sbjct: 106 KEINSPSNKIFHQK 119
>pdb|3QKG|A Chain A, Crystal Structure Of Alpha-1-Microglobulin At 2.3 A
Resolution
Length = 193
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 18/87 (20%)
Query: 40 EESSATHVGIAHTRWATHGAPSEVNSHPQRSDIDQTFC-------------VVHNGIVTN 86
E ++ + + TRW G E + +++D D F VVH TN
Sbjct: 53 EGATEAEISMTSTRWR-KGVCEETSGAYEKTDTDGKFLYHKSKWNITMESYVVH----TN 107
Query: 87 YKELKAFLTNKDHRPHGRSETMPMLPR 113
Y E FLT K R HG + T + R
Sbjct: 108 YDEYAIFLTKKFSRHHGPTITAKLYGR 134
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,509,921
Number of Sequences: 62578
Number of extensions: 825281
Number of successful extensions: 2080
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1998
Number of HSP's gapped (non-prelim): 51
length of query: 737
length of database: 14,973,337
effective HSP length: 106
effective length of query: 631
effective length of database: 8,340,069
effective search space: 5262583539
effective search space used: 5262583539
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)