BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy192
(898 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2J3S|A Chain A, Crystal Structure Of The Human Filamin A Ig Domains 19 To
21
pdb|2J3S|B Chain B, Crystal Structure Of The Human Filamin A Ig Domains 19 To
21
Length = 288
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 195/253 (77%), Gaps = 2/253 (0%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
GYGGLSLSIEGPSK +I +D DG+ ++Y PTEPG YIIN+KFAD HV GSPF+ K+
Sbjct: 35 GYGGLSLSIEGPSKVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVT 94
Query: 104 GEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEV 163
GEG R +E I R+R A V VGS C L+ K+P I+ D++A VTSP G T +AEI E
Sbjct: 95 GEG--RVKESITRRRRAPSVANVGSHCDLSLKIPEISIQDMTAQVTSPSGKTHEAEIVEG 152
Query: 164 EDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQ 223
E+ Y + FVP E+G HTVSV+YK H+PGSPFQFTVGPL +GGAH+V AGGPGLER E
Sbjct: 153 ENHTYCIRFVPAEMGTHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEA 212
Query: 224 NQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFND 283
P EF++WTREAGAG LAI+VEGPSKAEI F+DRKDGSC V+YVV EPG+Y V +KFN+
Sbjct: 213 GVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNE 272
Query: 284 QHIPDSPYKLFVS 296
+HIPDSP+ + V+
Sbjct: 273 EHIPDSPFVVPVA 285
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 159/282 (56%), Gaps = 9/282 (3%)
Query: 206 GGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYV 265
G A RV G GL G +P EF + TR+AG G L++S+EGPSK +I+ +D +DG+C V
Sbjct: 4 GDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRV 63
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAH-KLEIAQFPQGVVMADKPTQF- 323
+Y EPG Y + IKF DQH+P SP+ + V+ G+ K I + + +A+ +
Sbjct: 64 TYCPTEPGNYIINIKFADQHVPGSPFSVKVT---GEGRVKESITRRRRAPSVANVGSHCD 120
Query: 324 --LVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHI 381
L ++ + A+V SPSG + I + Y IRF+P E G H + +K+ G H+
Sbjct: 121 LSLKIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHV 180
Query: 382 PGSPLRIKVGK-GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKV 440
PGSP + VG GE V A G GL ++GV +F + T AGAG LA+ ++GPSK
Sbjct: 181 PGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKA 240
Query: 441 SMDCTEVEEGY-KVRYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
+ + ++G V Y PGDY VS+K+N HI SPF V
Sbjct: 241 EISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVV 282
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 161/343 (46%), Gaps = 79/343 (23%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V G GL G + EP F I T+ AG G GLS+++EGPSK +I D
Sbjct: 9 VRVSGQGLHEGHTFEPAEFIIDTRDAGYG-------------GLSLSIEGPSKVDINTED 55
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQIS----------V 677
+DGT V+Y PT PG Y I +KF ++H+ GSP+ K+TGEGR + I+ V
Sbjct: 56 LEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRRRRAPSVANV 115
Query: 678 GSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSV 737
GS ++S K+ + I+ + A + +PSG + + N I F P E+G+H VSV
Sbjct: 116 GSHCDLSL--KIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSV 173
Query: 738 KKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLTEGKTHEENPFTVDTRDAGSPLRIKV 797
K G H+ SPF+ VG G A KV+ G L + F++ TR+
Sbjct: 174 KYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTRE--------- 224
Query: 798 GKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSK--VSVKKYKDE 855
AGAG LA+ ++GPSK +S + KD
Sbjct: 225 ----------------------------------AGAGGLAIAVEGPSKAEISFEDRKD- 249
Query: 856 IFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ V Y+V++ G+Y + VK+ ++HIP SPF V V
Sbjct: 250 --------GSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 284
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 152/293 (51%), Gaps = 36/293 (12%)
Query: 396 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY-KVR 454
D + V +G GL E + +FI+DT +AG G L+++I+GPSKV ++ ++E+G +V
Sbjct: 5 DASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRVT 64
Query: 455 YTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK-DLGERGGQETSSVTVETVQKVAKNKTQ 513
Y P PG+Y +++K+ H+ GSPF VK TG+ + E + + +V V +
Sbjct: 65 YCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRRRRAPSVANVGSHCDLSLK 124
Query: 514 GPVIPIFKSDASKVTCKGMGLKKAYAQKQN-MFTIHCQDA-----------------GSP 555
P I I A + G + + +N + I A GSP
Sbjct: 125 IPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHVPGSP 184
Query: 556 FKLYVDSIPSG---YVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLS 612
F+ V + G V A GPGL +G P F+I T+ AGA GGL+
Sbjct: 185 FQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGA-------------GGLA 231
Query: 613 MAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
+AVEGPSKAEI++ D KDG+ V+Y+ PG+Y+++VKF E+HI SP++ +
Sbjct: 232 IAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 284
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 17/255 (6%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV--- 200
LS ++ P V D ++EDG V + P E G + +++++ D H+PGSPF V
Sbjct: 39 LSLSIEGPSKV--DINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGE 96
Query: 201 GPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPS--KAEIDFKDR 258
G +++ R A P + C+ ++ E + V PS E + +
Sbjct: 97 GRVKESITRRRRA--PSV--ANVGSHCDLSLKIPEISIQDMTAQVTSPSGKTHEAEIVEG 152
Query: 259 KDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSP-AMGDAHKLEIAQFPQGVVMA 317
++ + + +V AE G + V +K+ QH+P SP++ V P G AHK+ A
Sbjct: 153 ENHTYCIRFVPAEMGTHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEA 212
Query: 318 DKPTQFLV--RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIK 375
P +F + R+ GA G L V PS E F DG + + ++ +E G + + +K
Sbjct: 213 GVPAEFSIWTREAGA-GGLAIAVEGPSKAEIS-FEDRKDG-SCGVAYVVQEPGDYEVSVK 269
Query: 376 FNGVHIPGSPLRIKV 390
FN HIP SP + V
Sbjct: 270 FNEEHIPDSPFVVPV 284
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 44/145 (30%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHV------------------- 42
PSG + I + + T + + P E G H +++K+ G HV
Sbjct: 140 PSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHK 199
Query: 43 -------------------------QGYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPT 77
G GGL++++EGPSKAEI +D DGS ++Y
Sbjct: 200 VRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQ 259
Query: 78 EPGYYIINLKFADHHVEGSPFTAKI 102
EPG Y +++KF + H+ SPF +
Sbjct: 260 EPGDYEVSVKFNEEHIPDSPFVVPV 284
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 803 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTG 862
D + V +G GL E + +FI+DT +AG G L+++I+GPSKV +I T
Sbjct: 5 DASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKV-------DINTEDLE 57
Query: 863 RNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y + G Y++ +K+ D H+PGSPF V+V
Sbjct: 58 DGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKV 93
>pdb|2K9U|A Chain A, Solution Nmr Structure Of The Filamin-Migfilin Complex
Length = 119
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 90/112 (80%)
Query: 196 FQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDF 255
FQFTVGPL +GGAH+V AGG GLERG P EF++WTREAGAG L+I+VEGPSKAEI F
Sbjct: 6 FQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSKAEIAF 65
Query: 256 KDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEI 307
+DRKDGSC VSYVV EPG+Y V IKFND+HIPDSP+ + V+ DA +L +
Sbjct: 66 EDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSDDARRLTV 117
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 13/112 (11%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A G GL GV+G P F+I T+ AGAG GLS+AVEGPSKAEI + D
Sbjct: 21 VRAGGTGLERGVAGVPAEFSIWTREAGAG-------------GLSIAVEGPSKAEIAFED 67
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVGS 679
KDG+ VSY+ PG+Y++++KF ++HI SP++ + +++V S
Sbjct: 68 RKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSDDARRLTVTS 119
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGLS+++EGPSKAEI +D DGS +SY EPG Y +++KF D H+ SPF +
Sbjct: 47 GAGGLSIAVEGPSKAEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVA 106
Query: 104 GEGSNRQR 111
+ +R
Sbjct: 107 SLSDDARR 114
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 393 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY- 451
GE V A G GL +GV +F + T AGAG L++ ++GPSK + + ++G
Sbjct: 14 GEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSKAEIAFEDRKDGSC 73
Query: 452 KVRYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
V Y PGDY VS+K+N HI SPF V
Sbjct: 74 GVSYVVQEPGDYEVSIKFNDEHIPDSPFVV 103
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 800 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTR 859
GE V A G GL +GV +F + T AGAG L++ ++GPSK + ++D R
Sbjct: 14 GEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSKAEI-AFED----R 68
Query: 860 HTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
G V Y+V++ G+Y + +K+ D+HIP SPF V V
Sbjct: 69 KDGSCG--VSYVVQEPGDYEVSIKFNDEHIPDSPFVVPV 105
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 164 EDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRD 205
+DG V +V +E G + VS+++ D HIP SPF V L D
Sbjct: 69 KDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSD 110
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 291 YKLFVSP-AMGDAHKLEIAQFPQGVVMADKPTQFLV--RKNGAVGALDAKVISPSGTEDD 347
++ V P G AHK+ +A P +F + R+ GA G L V PS E
Sbjct: 6 FQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGA-GGLSIAVEGPSKAEI- 63
Query: 348 CFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
F DG + + ++ +E G + + IKFN HIP SP + V
Sbjct: 64 AFEDRKDG-SCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPV 105
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGER 756
L+ +++ PS E + +G+ G+S+ +E G + VS+K HI +SPF + V
Sbjct: 51 LSIAVEGPSKAE--IAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASL 108
Query: 757 EVGDAKKVKV 766
DA+++ V
Sbjct: 109 S-DDARRLTV 117
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
ED DG+ + Y +E G +E+++KFN +H+
Sbjct: 65 FEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHI 96
>pdb|3ISW|A Chain A, Crystal Structure Of Filamin-A Immunoglobulin-Like Repeat
21 An N-Terminal Peptide Of Cftr
pdb|3ISW|B Chain B, Crystal Structure Of Filamin-A Immunoglobulin-Like Repeat
21 An N-Terminal Peptide Of Cftr
Length = 99
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 80/96 (83%)
Query: 201 GPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKD 260
G + DGGAH+V AGGPGLER E P EF++WTREAGAG LAI+VEGPSKAEI F+DRKD
Sbjct: 1 GAMPDGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKD 60
Query: 261 GSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
GSC V+YVV EPG+Y V +KFN++HIPDSP+ + V+
Sbjct: 61 GSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 96
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL +G P F+I T+ AGAG GL++AVEGPSKAEI++ D
Sbjct: 11 VRAGGPGLERAEAGVPAEFSIWTREAGAG-------------GLAIAVEGPSKAEISFED 57
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT 666
KDG+ V+Y+ PG+Y+++VKF E+HI SP++ +
Sbjct: 58 RKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 96
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY-KVRYTPL 458
V A G GL ++GV +F + T AGAG LA+ ++GPSK + + ++G V Y
Sbjct: 11 VRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQ 70
Query: 459 VPGDYYVSLKYNGYHIVGSPFKV 481
PGDY VS+K+N HI SPF V
Sbjct: 71 EPGDYEVSVKFNEEHIPDSPFVV 93
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL ++GV +F + T AGAG LA+ ++GPSK + ++D R G
Sbjct: 11 VRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEI-SFED----RKDGSCG- 64
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+V++ G+Y + VK+ ++HIP SPF V V
Sbjct: 65 -VAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 95
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKI 102
G GGL++++EGPSKAEI +D DGS ++Y EPG Y +++KF + H+ SPF +
Sbjct: 37 GAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 95
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 164 EDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
+DG V +V +E G + VSV++ + HIP SPF V
Sbjct: 59 KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 95
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 300 GDAHKLEIAQFPQGVVMADKPTQFLV--RKNGAVGALDAKVISPSGTEDDCFIQPIDGDN 357
G AHK+ A P +F + R+ GA G L V PS E F DG +
Sbjct: 6 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGA-GGLAIAVEGPSKAEI-SFEDRKDG-S 62
Query: 358 YSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
+ ++ +E G + + +KFN HIP SP + V
Sbjct: 63 CGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 95
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
ED DG+ + Y +E G +E+++KFN +H+
Sbjct: 55 FEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHI 86
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
L +++ PS E + +G+ G+++ +E G + VSVK HI +SPF + V
Sbjct: 41 LAIAVEGPSKAE--ISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 95
>pdb|2BRQ|A Chain A, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Integrin Beta7 Cytoplasmic Tail Peptide
pdb|2BRQ|B Chain B, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Integrin Beta7 Cytoplasmic Tail Peptide
pdb|2JF1|A Chain A, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Integrin Beta2 Cytoplasmic Tail Peptide
Length = 97
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 77/91 (84%)
Query: 206 GGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYV 265
GGAH+V AGGPGLER E P EF++WTREAGAG LAI+VEGPSKAEI F+DRKDGSC V
Sbjct: 4 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGV 63
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
+YVV EPG+Y V +KFN++HIPDSP+ + V+
Sbjct: 64 AYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 94
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL +G P F+I T+ AGAG GL++AVEGPSKAEI++ D
Sbjct: 9 VRAGGPGLERAEAGVPAEFSIWTREAGAG-------------GLAIAVEGPSKAEISFED 55
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT 666
KDG+ V+Y+ PG+Y+++VKF E+HI SP++ +
Sbjct: 56 RKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 94
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY-KVRYTPL 458
V A G GL ++GV +F + T AGAG LA+ ++GPSK + + ++G V Y
Sbjct: 9 VRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQ 68
Query: 459 VPGDYYVSLKYNGYHIVGSPFKV 481
PGDY VS+K+N HI SPF V
Sbjct: 69 EPGDYEVSVKFNEEHIPDSPFVV 91
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL ++GV +F + T AGAG LA+ ++GPSK + ++D R G
Sbjct: 9 VRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEI-SFED----RKDGSCG- 62
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+V++ G+Y + VK+ ++HIP SPF V V
Sbjct: 63 -VAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 93
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKI 102
G GGL++++EGPSKAEI +D DGS ++Y EPG Y +++KF + H+ SPF +
Sbjct: 35 GAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 93
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 298 AMGDAHKLEIAQFPQGVVMADKPTQFLV--RKNGAVGALDAKVISPSGTEDDCFIQPIDG 355
AMG AHK+ A P +F + R+ GA G L V PS E F DG
Sbjct: 2 AMGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGA-GGLAIAVEGPSKAEIS-FEDRKDG 59
Query: 356 DNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
+ + ++ +E G + + +KFN HIP SP + V
Sbjct: 60 -SCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 93
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 164 EDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
+DG V +V +E G + VSV++ + HIP SPF V
Sbjct: 57 KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 93
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
ED DG+ + Y +E G +E+++KFN +H+
Sbjct: 53 FEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHI 84
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
L +++ PS E + +G+ G+++ +E G + VSVK HI +SPF + V
Sbjct: 39 LAIAVEGPSKAE--ISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 93
>pdb|2W0P|A Chain A, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Migfilin Peptide
pdb|2W0P|B Chain B, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Migfilin Peptide
Length = 94
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 77/91 (84%)
Query: 206 GGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYV 265
GGAH+V AGGPGLER E P EF++WTREAGAG LAI+VEGPSKAEI F+DRKDGSC V
Sbjct: 1 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGV 60
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
+YVV EPG+Y V +KFN++HIPDSP+ + V+
Sbjct: 61 AYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 91
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL +G P F+I T+ AGAG GL++AVEGPSKAEI++ D
Sbjct: 6 VRAGGPGLERAEAGVPAEFSIWTREAGAG-------------GLAIAVEGPSKAEISFED 52
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT 666
KDG+ V+Y+ PG+Y+++VKF E+HI SP++ +
Sbjct: 53 RKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 91
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY-KVRYTPL 458
V A G GL ++GV +F + T AGAG LA+ ++GPSK + + ++G V Y
Sbjct: 6 VRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQ 65
Query: 459 VPGDYYVSLKYNGYHIVGSPFKV 481
PGDY VS+K+N HI SPF V
Sbjct: 66 EPGDYEVSVKFNEEHIPDSPFVV 88
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKI 102
G GGL++++EGPSKAEI +D DGS ++Y EPG Y +++KF + H+ SPF +
Sbjct: 32 GAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 90
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL ++GV +F + T AGAG LA+ ++GPSK + ++D R G
Sbjct: 6 VRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEI-SFED----RKDGSCG- 59
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+V++ G+Y + VK+ ++HIP SPF V V
Sbjct: 60 -VAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 90
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 164 EDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
+DG V +V +E G + VSV++ + HIP SPF V
Sbjct: 54 KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 90
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 300 GDAHKLEIAQFPQGVVMADKPTQFLV--RKNGAVGALDAKVISPSGTEDDCFIQPIDGDN 357
G AHK+ A P +F + R+ GA G L V PS E F DG +
Sbjct: 1 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGA-GGLAIAVEGPSKAEIS-FEDRKDG-S 57
Query: 358 YSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
+ ++ +E G + + +KFN HIP SP + V
Sbjct: 58 CGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 90
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
ED DG+ + Y +E G +E+++KFN +H+
Sbjct: 50 FEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHI 81
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
L +++ PS E + +G+ G+++ +E G + VSVK HI +SPF + V
Sbjct: 36 LAIAVEGPSKAE--ISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 90
>pdb|2K7Q|A Chain A, Filamin A Ig-Like Domains 18-19
Length = 191
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 118/228 (51%), Gaps = 52/228 (22%)
Query: 671 KRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREV 730
+ + + VGS +++ P +S++D+ L A++ PSG EEPC LK++ NG++GISF P+E
Sbjct: 9 RMSHLKVGSAADI--PINISETDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKET 66
Query: 731 GSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLTEGKTHEENPFTVDTRDAG 790
G HLV VKK G H+ +SP + + + E+GDA +V+V GQ L EG T E F +DTRD
Sbjct: 67 GEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRD-- 124
Query: 791 SPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVK 850
AG G L+++I+GPSKV
Sbjct: 125 -----------------------------------------AGYGGLSLSIEGPSKV--- 140
Query: 851 KYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+I T V Y + G Y++ +K+ D H+PGSPF V+V
Sbjct: 141 ----DINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKV 184
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 95/172 (55%)
Query: 125 EVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSV 184
+VGS + + L+ATV P G E + + +G + FVPKE G H V V
Sbjct: 14 KVGSAADIPINISETDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHV 73
Query: 185 RYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAIS 244
+ H+ SP + G A RV G GL G +P EF + TR+AG G L++S
Sbjct: 74 KKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLS 133
Query: 245 VEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
+EGPSK +I+ +D +DG+C V+Y EPG Y + IKF DQH+P SP+ + V+
Sbjct: 134 IEGPSKVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVT 185
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Query: 334 LDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKG 393
L A V+ PSG E+ C ++ + + I F+P+E G H +H+K NG H+ SP+ + + +
Sbjct: 33 LTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQS 92
Query: 394 E-ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY- 451
E D + V +G GL E + +FI+DT +AG G L+++I+GPSKV ++ ++E+G
Sbjct: 93 EIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTC 152
Query: 452 KVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
+V Y P PG+Y +++K+ H+ GSPF VK TG+
Sbjct: 153 RVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGE 187
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 44/149 (29%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQ------------------ 43
PSG + +++ +G V + + P+E G H + +K NG HV
Sbjct: 40 PSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASR 99
Query: 44 --------------------------GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPT 77
GYGGLSLSIEGPSK +I +D DG+ ++Y PT
Sbjct: 100 VRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRVTYCPT 159
Query: 78 EPGYYIINLKFADHHVEGSPFTAKIVGEG 106
EPG YIIN+KFAD HV GSPF+ K+ GEG
Sbjct: 160 EPGNYIINIKFADQHVPGSPFSVKVTGEG 188
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 13/103 (12%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V G GL G + EP F I T+ AG G GLS+++EGPSK +I D
Sbjct: 100 VRVSGQGLHEGHTFEPAEFIIDTRDAGYG-------------GLSLSIEGPSKVDINTED 146
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGR 670
+DGT V+Y PT PG Y I +KF ++H+ GSP+ K+TGEGR
Sbjct: 147 LEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGR 189
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 48 LSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIVGE 105
L+ ++ PS E C K +G + IS+ P E G +++++K HV SP ++ +
Sbjct: 33 LTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPV-VISQ 91
Query: 106 GSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVED 165
+++ + + + LS ++ P V D ++ED
Sbjct: 92 SEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKV--DINTEDLED 149
Query: 166 GLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
G V + P E G + +++++ D H+PGSPF V
Sbjct: 150 GTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKV 184
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 25/141 (17%)
Query: 629 KDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVGSCSEVSFPGK 688
++G V +S++P GE+ + VK +H+ SP I+ Q +G S V G+
Sbjct: 53 RNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVIS-------QSEIGDASRVRVSGQ 105
Query: 689 ----------------VSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGS 732
D+ L+ SI+ PS ++ + + +G +++ P E G+
Sbjct: 106 GLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVD--INTEDLEDGTCRVTYCPTEPGN 163
Query: 733 HLVSVKKMGVHIKNSPFKINV 753
+++++K H+ SPF + V
Sbjct: 164 YIINIKFADQHVPGSPFSVKV 184
>pdb|2K7P|A Chain A, Filamin A Ig-Like Domains 16-17
Length = 188
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 95/154 (61%), Gaps = 3/154 (1%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
+++ V P G I + +DG V + P E G+H + +RY ++HIPGSP QF V
Sbjct: 35 EITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDY 94
Query: 203 LRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGS 262
+ G V A GPGL G N+P F V T++AG G L++++EGPSKAEI D +DG+
Sbjct: 95 VNCG---HVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGT 151
Query: 263 CYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
C VSY+ PG+Y + +K+N+QH+P SP+ V+
Sbjct: 152 CSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVT 185
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 81/116 (69%), Gaps = 13/116 (11%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLS 612
GSP + YVD + G+VTAYGPGL GV +P FT++TK AG +GGLS
Sbjct: 85 GSPLQFYVDYVNCGHVTAYGPGLTHGVVNKPATFTVNTKDAG-------------EGGLS 131
Query: 613 MAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGE 668
+A+EGPSKAEI+ DN+DGT +VSYLP PG+Y I VK+ E+H+ GSP+ A++TG+
Sbjct: 132 LAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTGD 187
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 77/146 (52%), Gaps = 41/146 (28%)
Query: 1 MPSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHV------------------ 42
MPSG V +P I DN DGTV++ Y P E GLHE+ ++++ H+
Sbjct: 42 MPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHVT 101
Query: 43 -----------------------QGYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEP 79
G GGLSL+IEGPSKAEI C DN DG+ ++SY P P
Sbjct: 102 AYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLPVLP 161
Query: 80 GYYIINLKFADHHVEGSPFTAKIVGE 105
G Y I +K+ + HV GSPFTA++ G+
Sbjct: 162 GDYSILVKYNEQHVPGSPFTARVTGD 187
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 11/178 (6%)
Query: 315 VMADKPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDN----YSIRFMPRENGIH 370
V + +P ++ G + +V PSG QP DN ++R+ P E G+H
Sbjct: 17 VTSLRPFDLVIPFTIKKGEITGEVRMPSGK----VAQPTITDNKDGTVTVRYAPSEAGLH 72
Query: 371 NIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTL 430
+ I+++ +HIPGSPL+ V + V A G GL F V+T +AG G L
Sbjct: 73 EMDIRYDNMHIPGSPLQFYVDY--VNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGL 130
Query: 431 AVTIDGPSKVSMDCTEVEEGY-KVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKD 487
++ I+GPSK + CT+ ++G V Y P++PGDY + +KYN H+ GSPF + TG D
Sbjct: 131 SLAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTGDD 188
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 251 AEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEIAQF 310
A+ D KDG+ V Y +E G + + I++++ HIP SP + +V
Sbjct: 48 AQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHVTAYGPGL 107
Query: 311 PQGVVMADKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGI 369
GVV +KP F V K+ G L + PS E C DG S+ ++P G
Sbjct: 108 THGVV--NKPATFTVNTKDAGEGGLSLAIEGPSKAEISC-TDNQDG-TCSVSYLPVLPGD 163
Query: 370 HNIHIKFNGVHIPGSPLRIKV 390
++I +K+N H+PGSP +V
Sbjct: 164 YSILVKYNEQHVPGSPFTARV 184
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 76/202 (37%), Gaps = 53/202 (26%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGER 756
+ ++ PSG + +G + + + P E G H + ++ +HI SP + V
Sbjct: 36 ITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDYV 95
Query: 757 EVGDAKKVKVFGQSLTEGKTHEENPFTVDTRDAGSPLRIKVGKGEADPAAVHATGNGLAE 816
G V +G LT G ++ PA
Sbjct: 96 NCG---HVTAYGPGLTHGVVNK-------------------------PAT---------- 117
Query: 817 IKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNFEVKYIVRDRG 876
F V+T +AG G L++ I+GPSK EI V Y+ G
Sbjct: 118 --------FTVNTKDAGEGGLSLAIEGPSKA-------EISCTDNQDGTCSVSYLPVLPG 162
Query: 877 EYLLIVKWGDDHIPGSPFKVEV 898
+Y ++VK+ + H+PGSPF V
Sbjct: 163 DYSILVKYNEQHVPGSPFTARV 184
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 598 PFQFTVG-PLRDGGLSMAVEGPSK--AEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEK 654
PF + ++ G ++ V PS A+ T DNKDGTV V Y P+ G +++ +++
Sbjct: 22 PFDLVIPFTIKKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNM 81
Query: 655 HIKGSPY--------LAKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSG 706
HI GSP +T G V +F D+ L+ +I+ PS
Sbjct: 82 HIPGSPLQFYVDYVNCGHVTAYGPGLTHGVVN--KPATFTVNTKDAGEGGLSLAIEGPSK 139
Query: 707 LEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
E C + +G +S+ P G + + VK H+ SPF V
Sbjct: 140 AEISCTDNQ--DGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARV 184
>pdb|2EE6|A Chain A, Solution Structure Of The 21th Filamin Domain From Human
Filamin-B
Length = 105
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 73/95 (76%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSY 267
AH+V AGGPGLERGE P EF++WTREAGAG L+I+VEGPSKAEI F D K+GSC VSY
Sbjct: 11 AHKVRAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKAEITFDDHKNGSCGVSY 70
Query: 268 VVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDA 302
+ EPG Y V IKFND+HIP+SPY + V DA
Sbjct: 71 IAQEPGNYEVSIKFNDEHIPESPYLVPVIAPSDDA 105
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 13/98 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL G +G P F+I T+ AGAG GLS+AVEGPSKAEIT+ D
Sbjct: 14 VRAGGPGLERGEAGVPAEFSIWTREAGAG-------------GLSIAVEGPSKAEITFDD 60
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
+K+G+ VSY+ PG Y++++KF ++HI SPYL +
Sbjct: 61 HKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPV 98
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGLS+++EGPSKAEI D+ +GS +SY EPG Y +++KF D H+ SP+ ++
Sbjct: 40 GAGGLSIAVEGPSKAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPVI 99
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL ++GV +F + T AGAG L++ ++GPSK + F H +
Sbjct: 14 VRAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKAEI------TFDDHK-NGSC 66
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V YI ++ G Y + +K+ D+HIP SP+ V V
Sbjct: 67 GVSYIAQEPGNYEVSIKFNDEHIPESPYLVPV 98
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY-KVRYTPL 458
V A G GL ++GV +F + T AGAG L++ ++GPSK + + + G V Y
Sbjct: 14 VRAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKAEITFDDHKNGSCGVSYIAQ 73
Query: 459 VPGDYYVSLKYNGYHIVGSPFKV 481
PG+Y VS+K+N HI SP+ V
Sbjct: 74 EPGNYEVSIKFNDEHIPESPYLV 96
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
L+ +++ PS E NG+ G+S+ +E G++ VS+K HI SP+ + V
Sbjct: 44 LSIAVEGPSKAE--ITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPV 98
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 320 PTQFLV--RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYS--IRFMPRENGIHNIHIK 375
P +F + R+ GA G L V PS E I D N S + ++ +E G + + IK
Sbjct: 29 PAEFSIWTREAGA-GGLSIAVEGPSKAE----ITFDDHKNGSCGVSYIAQEPGNYEVSIK 83
Query: 376 FNGVHIPGSPLRIKV 390
FN HIP SP + V
Sbjct: 84 FNDEHIPESPYLVPV 98
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 125 EVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEI--NEVEDGLYAVHFVPKELGVHTV 182
E G + + A LS V P AEI ++ ++G V ++ +E G + V
Sbjct: 25 EAGVPAEFSIWTREAGAGGLSIAVEGP----SKAEITFDDHKNGSCGVSYIAQEPGNYEV 80
Query: 183 SVRYKDIHIPGSPFQFTV 200
S+++ D HIP SP+ V
Sbjct: 81 SIKFNDEHIPESPYLVPV 98
>pdb|2D7O|A Chain A, Solution Structure Of The 17th Filamin Domain From Human
Filamin C
Length = 111
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 79/117 (67%), Gaps = 13/117 (11%)
Query: 562 SIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKA 621
+I S +V+AYGPGL G+ +P FTI TK AG +GGLS+AVEGPSKA
Sbjct: 8 AINSRHVSAYGPGLSHGMVNKPATFTIVTKDAG-------------EGGLSLAVEGPSKA 54
Query: 622 EITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVG 678
EIT DNKDGT VSYLPTAPG+Y I V+F +KHI GSP+ AKITG+ R+ S G
Sbjct: 55 EITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKITGDDSMRSGPSSG 111
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSY 267
+ V A GPGL G N+P F + T++AG G L+++VEGPSKAEI KD KDG+C VSY
Sbjct: 11 SRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSY 70
Query: 268 VVAEPGEYRVGIKFNDQHIPDSPY 291
+ PG+Y + ++F+D+HIP SP+
Sbjct: 71 LPTAPGDYSIIVRFDDKHIPGSPF 94
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGLSL++EGPSKAEI CKDN DG+ +SY PT PG Y I ++F D H+ GSPFTAKI
Sbjct: 40 GEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKIT 99
Query: 104 GEGSNRQ 110
G+ S R
Sbjct: 100 GDDSMRS 106
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY-KVRYTPL 458
V A G GL+ F + T +AG G L++ ++GPSK + C + ++G V Y P
Sbjct: 14 VSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPT 73
Query: 459 VPGDYYVSLKYNGYHIVGSPFKVKCTGKD 487
PGDY + ++++ HI GSPF K TG D
Sbjct: 74 APGDYSIIVRFDDKHIPGSPFTAKITGDD 102
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL+ F + T +AG G L++ ++GPSK EI +
Sbjct: 14 VSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKA-------EITCKDNKDGTC 66
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+ G+Y +IV++ D HIPGSPF ++
Sbjct: 67 TVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 98
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 316 MADKPTQF-LVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHI 374
M +KP F +V K+ G L V PS E C DG ++ ++P G ++I +
Sbjct: 25 MVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNK-DG-TCTVSYLPTAPGDYSIIV 82
Query: 375 KFNGVHIPGSPLRIKV 390
+F+ HIPGSP K+
Sbjct: 83 RFDDKHIPGSPFTAKI 98
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 158 AEIN--EVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
AEI + +DG V ++P G +++ VR+ D HIPGSPF +
Sbjct: 54 AEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 98
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 10 VIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
+DN DGT ++ Y P G + + ++F+ H+ G
Sbjct: 57 TCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPG 91
>pdb|2EEA|A Chain A, Solution Structure Of The 17th Filamin Domain From Human
Filamin-B
Length = 115
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 13/118 (11%)
Query: 554 SPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSM 613
SP + YV+ SG V+AYGPGL+ GV+ + FTI T+ AG +GGL +
Sbjct: 10 SPLQFYVNYPNSGSVSAYGPGLVYGVANKTATFTIVTEDAG-------------EGGLDL 56
Query: 614 AVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRK 671
A+EGPSKAEI+ DNKDGT V+YLPT PG+Y I VK+ +KHI GSP+ AKIT + R+
Sbjct: 57 AIEGPSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITDDSRR 114
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 192 PGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKA 251
P SP QF V G V A GPGL G N+ F + T +AG G L +++EGPSKA
Sbjct: 8 PESPLQFYVNYPNSG---SVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKA 64
Query: 252 EIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPY 291
EI D KDG+C V+Y+ PG+Y + +K+ND+HIP SP+
Sbjct: 65 EISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPF 104
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 45/62 (72%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGL L+IEGPSKAEI C DN DG+ ++Y PT PG Y I +K+ D H+ GSPFTAKI
Sbjct: 50 GEGGLDLAIEGPSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKIT 109
Query: 104 GE 105
+
Sbjct: 110 DD 111
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 382 PGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVS 441
P SPL+ V + +V A G GL + F + T +AG G L + I+GPSK
Sbjct: 8 PESPLQFYVNYPNS--GSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKAE 65
Query: 442 MDCTEVEEGY-KVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCT 484
+ C + ++G V Y P +PGDY + +KYN HI GSPF K T
Sbjct: 66 ISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKIT 109
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 791 SPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVK 850
SPL+ V + +V A G GL + F + T +AG G L + I+GPSK
Sbjct: 10 SPLQFYVNYPNS--GSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKA--- 64
Query: 851 KYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
EI V Y+ G+Y ++VK+ D HIPGSPF ++
Sbjct: 65 ----EISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI 108
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 287 PDSPYKLFVS-PAMGDAHKLEIAQFPQGVV--MADKPTQF-LVRKNGAVGALDAKVISPS 342
P+SP + +V+ P G ++ + G+V +A+K F +V ++ G LD + PS
Sbjct: 8 PESPLQFYVNYPNSG-----SVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPS 62
Query: 343 GTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
E C I DG ++ ++P G ++I +K+N HIPGSP K+
Sbjct: 63 KAEISC-IDNKDG-TCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI 108
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 158 AEINEVE--DGLYAVHFVPKELGVHTVSVRYKDIHIPGSPF 196
AEI+ ++ DG V ++P G +++ V+Y D HIPGSPF
Sbjct: 64 AEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPF 104
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 13 DNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
DN DGT ++ Y P G + + +K+N H+ G
Sbjct: 70 DNKDGTCTVTYLPTLPGDYSILVKYNDKHIPG 101
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGE 755
L+ +I+ PS E C K +G +++ P G + + VK HI SPF + +
Sbjct: 54 LDLAIEGPSKAEISCIDNK--DGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITD 110
>pdb|2AAV|A Chain A, Solution Nmr Structure Of Filamin A Domain 17
Length = 98
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 13/106 (12%)
Query: 563 IPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAE 622
+ G+VTAYGPGL GV +P FT++TK AG +GGLS+A+EGPSKAE
Sbjct: 5 VNCGHVTAYGPGLTHGVVNKPATFTVNTKDAG-------------EGGLSLAIEGPSKAE 51
Query: 623 ITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGE 668
I+ DN+DGT +VSYLP PG+Y I VK+ E+H+ GSP+ A++TG+
Sbjct: 52 ISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTGD 97
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%)
Query: 210 RVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVV 269
V A GPGL G N+P F V T++AG G L++++EGPSKAEI D +DG+C VSY+
Sbjct: 9 HVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLP 68
Query: 270 AEPGEYRVGIKFNDQHIPDSPYKLFVS 296
PG+Y + +K+N+QH+P SP+ V+
Sbjct: 69 VLPGDYSILVKYNEQHVPGSPFTARVT 95
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 47/62 (75%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGLSL+IEGPSKAEI C DN DG+ ++SY P PG Y I +K+ + HV GSPFTA++
Sbjct: 36 GEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVT 95
Query: 104 GE 105
G+
Sbjct: 96 GD 97
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG-YKVRYTPL 458
V A G GL F V+T +AG G L++ I+GPSK + CT+ ++G V Y P+
Sbjct: 10 VTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLPV 69
Query: 459 VPGDYYVSLKYNGYHIVGSPFKVKCTGKD 487
+PGDY + +KYN H+ GSPF + TG D
Sbjct: 70 LPGDYSILVKYNEQHVPGSPFTARVTGDD 98
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL F V+T +AG G L++ I+GPSK EI
Sbjct: 10 VTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKA-------EISCTDNQDGTC 62
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+ G+Y ++VK+ + H+PGSPF V
Sbjct: 63 SVSYLPVLPGDYSILVKYNEQHVPGSPFTARV 94
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 316 MADKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHI 374
+ +KP F V K+ G L + PS E C DG S+ ++P G ++I +
Sbjct: 21 VVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISC-TDNQDG-TCSVSYLPVLPGDYSILV 78
Query: 375 KFNGVHIPGSPLRIKV 390
K+N H+PGSP +V
Sbjct: 79 KYNEQHVPGSPFTARV 94
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 158 AEIN--EVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
AEI+ + +DG +V ++P G +++ V+Y + H+PGSPF V
Sbjct: 50 AEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARV 94
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 13 DNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
DN DGT S+ Y P G + + +K+N HV G
Sbjct: 56 DNQDGTCSVSYLPVLPGDYSILVKYNEQHVPG 87
>pdb|2BP3|A Chain A, Crystal Structure Of Filamin A Domain 17 And Gpib Alpha
Cytoplasmic Domain Complex
pdb|2BP3|B Chain B, Crystal Structure Of Filamin A Domain 17 And Gpib Alpha
Cytoplasmic Domain Complex
Length = 97
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 13/106 (12%)
Query: 563 IPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAE 622
+ G+VTAYGPGL GV +P FT++TK AG +GGLS+A+EGPSKAE
Sbjct: 4 VNCGHVTAYGPGLTHGVVNKPATFTVNTKDAG-------------EGGLSLAIEGPSKAE 50
Query: 623 ITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGE 668
I+ DN+DGT +VSYLP PG+Y I VK+ E+H+ GSP+ A++TG+
Sbjct: 51 ISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTGD 96
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%)
Query: 210 RVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVV 269
V A GPGL G N+P F V T++AG G L++++EGPSKAEI D +DG+C VSY+
Sbjct: 8 HVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLP 67
Query: 270 AEPGEYRVGIKFNDQHIPDSPYKLFVS 296
PG+Y + +K+N+QH+P SP+ V+
Sbjct: 68 VLPGDYSILVKYNEQHVPGSPFTARVT 94
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 47/62 (75%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGLSL+IEGPSKAEI C DN DG+ ++SY P PG Y I +K+ + HV GSPFTA++
Sbjct: 35 GEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVT 94
Query: 104 GE 105
G+
Sbjct: 95 GD 96
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG-YKVRYTPL 458
V A G GL F V+T +AG G L++ I+GPSK + CT+ ++G V Y P+
Sbjct: 9 VTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLPV 68
Query: 459 VPGDYYVSLKYNGYHIVGSPFKVKCTGKD 487
+PGDY + +KYN H+ GSPF + TG D
Sbjct: 69 LPGDYSILVKYNEQHVPGSPFTARVTGDD 97
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL F V+T +AG G L++ I+GPSK EI
Sbjct: 9 VTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKA-------EISCTDNQDGTC 61
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+ G+Y ++VK+ + H+PGSPF V
Sbjct: 62 SVSYLPVLPGDYSILVKYNEQHVPGSPFTARV 93
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 316 MADKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHI 374
+ +KP F V K+ G L + PS E C DG S+ ++P G ++I +
Sbjct: 20 VVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISC-TDNQDG-TCSVSYLPVLPGDYSILV 77
Query: 375 KFNGVHIPGSPLRIKV 390
K+N H+PGSP +V
Sbjct: 78 KYNEQHVPGSPFTARV 93
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 158 AEIN--EVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
AEI+ + +DG +V ++P G +++ V+Y + H+PGSPF V
Sbjct: 49 AEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARV 93
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 13 DNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
DN DGT S+ Y P G + + +K+N HV G
Sbjct: 55 DNQDGTCSVSYLPVLPGDYSILVKYNEQHVPG 86
>pdb|2DMC|A Chain A, Solution Structure Of The 18th Filamin Domain From Human
Filamin-B
Length = 116
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 661 YLAKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGN 720
+ AKIT + R+ +Q+ +GS ++ F +S++D+ SL ASI+APSG +EPC LK++PN +
Sbjct: 13 FTAKITDDSRRCSQVKLGSAAD--FLLDISETDLSSLTASIKAPSGRDEPCLLKRLPNNH 70
Query: 721 LGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDA 761
+GISF PREVG HLVS+KK G H+ NSP I V + E+GD+
Sbjct: 71 IGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDS 111
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 331 VGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
+ +L A + +PSG ++ C ++ + ++ I F+PRE G H + IK NG H+ SP+ I V
Sbjct: 44 LSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMV 103
Query: 391 GKGE 394
+ E
Sbjct: 104 VQSE 107
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 408 AEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVE---EGYKVRYTPLVPGDYY 464
+++K G DF++D +L +I PS C + + P G++
Sbjct: 25 SQVKLGSAADFLLDISETDLSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHL 84
Query: 465 VSLKYNGYHIVGSPFKVKCTGKDLGERG 492
VS+K NG H+ SP + ++G+ G
Sbjct: 85 VSIKKNGNHVANSPVSIMVVQSEIGDSG 112
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 815 AEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDE-IFTRHTGRNNFEVKYIVR 873
+++K G DF++D +L +I PS +DE + N+ + +I R
Sbjct: 25 SQVKLGSAADFLLDISETDLSSLTASIKAPSG------RDEPCLLKRLPNNHIGISFIPR 78
Query: 874 DRGEYLLIVKWGDDHIPGSPFKVEV 898
+ GE+L+ +K +H+ SP + V
Sbjct: 79 EVGEHLVSIKKNGNHVANSPVSIMV 103
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 98 FTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTED 157
FTAKI + +R+ +++ +GS + L+A++ +P G E
Sbjct: 13 FTAKITDD--SRRCSQVK----------LGSAADFLLDISETDLSSLTASIKAPSGRDEP 60
Query: 158 AEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
+ + + + F+P+E+G H VS++ H+ SP V
Sbjct: 61 CLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMV 103
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 228 EFNVWTREAGAGSLAISVEGPSKAE--IDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQH 285
+F + E SL S++ PS + K + +S++ E GE+ V IK N H
Sbjct: 34 DFLLDISETDLSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNH 93
Query: 286 IPDSPYKLFV 295
+ +SP + V
Sbjct: 94 VANSPVSIMV 103
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 45 YGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKI 102
L+ SI+ PS + C K + + IS+ P E G +++++K +HV SP + +
Sbjct: 44 LSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMV 103
Query: 103 V 103
V
Sbjct: 104 V 104
>pdb|2NQC|A Chain A, Crystal Structure Of Ig-Like Domain 23 From Human Filamin
C
Length = 138
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGYKVR 454
DP V A G GL +GV ++FIV+T NAG+G L+VTIDGPSKV +DC E EG+ V
Sbjct: 43 GDPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGHVVT 102
Query: 455 YTPLVPGDYYVSLKYNG-YHIVGSPFKVKCTGKDL 488
YTP+ PG+Y +++KY G HIVGSPFK K TG L
Sbjct: 103 YTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTGPRL 137
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 566 GYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITY 625
G V+AYGPGL G +G F ++T AG+G+ LS+ ++GPSK ++
Sbjct: 46 GLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGA-------------LSVTIDGPSKVQLDC 92
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKF-GEKHIKGSPYLAKITG 667
+ +G V V+Y P APG Y IA+K+ G +HI GSP+ AK+TG
Sbjct: 93 RECPEGHV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTG 134
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 802 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHT 861
DP V A G GL +GV ++FIV+T NAG+G L+VTIDGPSKV + E H
Sbjct: 43 GDPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSKVQLD--CRECPEGHV 100
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGD-DHIPGSPFKVEV 898
V Y G YL+ +K+G HI GSPFK +V
Sbjct: 101 ------VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKV 132
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 211 VHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVA 270
V A GPGLE G EF V T AG+G+L+++++GPSK ++D ++ +G V+Y
Sbjct: 48 VSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGHV-VTYTPM 106
Query: 271 EPGEYRVGIKFND-QHIPDSPYKLFVS 296
PG Y + IK+ QHI SP+K V+
Sbjct: 107 APGNYLIAIKYGGPQHIVGSPFKAKVT 133
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFAD-HHVEGSPFTAKI 102
G G LS++I+GPSK ++ C++ +G + ++Y P PG Y+I +K+ H+ GSPF AK+
Sbjct: 74 GSGALSVTIDGPSKVQLDCRECPEGHV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKV 132
Query: 103 VG 104
G
Sbjct: 133 TG 134
>pdb|2K3T|A Chain A, Solution Structure Of Ig-Like Domain 23 From Human Filamin
A
Length = 99
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 396 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGYKVRY 455
DP V A G GL +G +F+V+T NAGAG L+VTIDGPSKV MDC E EGY+V Y
Sbjct: 5 DPGLVSAYGAGLEGGVTGNPAEFVVNTSNAGAGALSVTIDGPSKVKMDCQECPEGYRVTY 64
Query: 456 TPLVPGDYYVSLKYNG-YHIVGSPFKVKCTGKDL 488
TP+ PG Y +S+KY G YHI GSPFK K TG L
Sbjct: 65 TPMAPGSYLISIKYGGPYHIGGSPFKAKVTGPRL 98
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 566 GYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITY 625
G V+AYG GL GV+G P F ++T AGAG+ LS+ ++GPSK ++
Sbjct: 7 GLVSAYGAGLEGGVTGNPAEFVVNTSNAGAGA-------------LSVTIDGPSKVKMDC 53
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKF-GEKHIKGSPYLAKITG 667
+ +G V+Y P APG Y I++K+ G HI GSP+ AK+TG
Sbjct: 54 QECPEG-YRVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKVTG 95
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 803 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTG 862
DP V A G GL +G +F+V+T NAGAG L+VTIDGPSKV + +
Sbjct: 5 DPGLVSAYGAGLEGGVTGNPAEFVVNTSNAGAGALSVTIDGPSKVKMDCQECP------- 57
Query: 863 RNNFEVKYIVRDRGEYLLIVKWGDD-HIPGSPFKVEV 898
+ V Y G YL+ +K+G HI GSPFK +V
Sbjct: 58 -EGYRVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKV 93
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 211 VHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVA 270
V A G GLE G P EF V T AGAG+L+++++GPSK ++D ++ +G V+Y
Sbjct: 9 VSAYGAGLEGGVTGNPAEFVVNTSNAGAGALSVTIDGPSKVKMDCQECPEGY-RVTYTPM 67
Query: 271 EPGEYRVGIKFND-QHIPDSPYKLFVS 296
PG Y + IK+ HI SP+K V+
Sbjct: 68 APGSYLISIKYGGPYHIGGSPFKAKVT 94
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFAD-HHVEGSPFTAKI 102
G G LS++I+GPSK ++ C++ +G ++Y P PG Y+I++K+ +H+ GSPF AK+
Sbjct: 35 GAGALSVTIDGPSKVKMDCQECPEG-YRVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKV 93
Query: 103 VG 104
G
Sbjct: 94 TG 95
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 690 SDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMG-VHIKNSP 748
S++ +L+ +I PS ++ C ++ P G +++TP GS+L+S+K G HI SP
Sbjct: 32 SNAGAGALSVTIDGPSKVKMDC--QECPEGYR-VTYTPMAPGSYLISIKYGGPYHIGGSP 88
Query: 749 FKINV-GEREV 758
FK V G R V
Sbjct: 89 FKAKVTGPRLV 99
>pdb|2EEC|A Chain A, Solution Structure Of The 23th Filamin Domain From Human
Filamin-B
Length = 125
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 84/118 (71%), Gaps = 4/118 (3%)
Query: 386 LRIKVGK-GEA-DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMD 443
+++VG+ G+A +PA V A G GL +G++++F ++T AG GTL+VTI+GPSKV MD
Sbjct: 8 FKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGPSKVKMD 67
Query: 444 CTEVEEGYKVRYTPLVPGDYYVSLKYNG-YHIVGSPFKVKCTGKDLGERG-GQETSSV 499
C E EGYKV YTP+ PG+Y +S+KY G HIVGSPFK K TG+ L G ETSS+
Sbjct: 68 CQETPEGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVTGQRLVSPGSANETSSI 125
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Query: 793 LRIKVGK-GEA-DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVK 850
+++VG+ G+A +PA V A G GL +G++++F ++T AG GTL+VTI+GPSKV +
Sbjct: 8 FKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGPSKVKMD 67
Query: 851 KYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGD-DHIPGSPFKVEV 898
+ ++V Y G YL+ VK+G +HI GSPFK +V
Sbjct: 68 CQETP--------EGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKV 108
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFAD-HHVEGSPFTAKI 102
G G LS++IEGPSK ++ C++ +G + Y P PG Y+I++K+ +H+ GSPF AK+
Sbjct: 50 GPGTLSVTIEGPSKVKMDCQETPEG-YKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKV 108
Query: 103 VGE 105
G+
Sbjct: 109 TGQ 111
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 19/118 (16%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V+AYG GL G +G F I+T AG G+ LS+ +EGPSK ++ +
Sbjct: 24 VSAYGTGLEGGTTGIQSEFFINTTRAGPGT-------------LSVTIEGPSKVKMDCQE 70
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKF-GEKHIKGSPYLAKITGEGRKRNQISVGSCSEVS 684
+G V Y P APG Y I+VK+ G HI GSP+ AK+TG+ +S GS +E S
Sbjct: 71 TPEG-YKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVTGQ----RLVSPGSANETS 123
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 228 EFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFND-QHI 286
EF + T AG G+L++++EGPSK ++D ++ +G V Y PG Y + +K+ HI
Sbjct: 41 EFFINTTRAGPGTLSVTIEGPSKVKMDCQETPEG-YKVMYTPMAPGNYLISVKYGGPNHI 99
Query: 287 PDSPYKLFVS 296
SP+K V+
Sbjct: 100 VGSPFKAKVT 109
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 696 SLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGV-HIKNSPFKINV- 753
+L+ +I+ PS ++ C ++ P G + +TP G++L+SVK G HI SPFK V
Sbjct: 53 TLSVTIEGPSKVKMDC--QETPEG-YKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVT 109
Query: 754 GEREV 758
G+R V
Sbjct: 110 GQRLV 114
>pdb|2D7Q|A Chain A, Solution Structure Of The 23th Filamin Domain From Human
Filamin C
Length = 111
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 396 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGYKVRY 455
DP V A G GL +GV ++FIV+T NAG+G L+VTIDGPSKV +DC E EG+ V Y
Sbjct: 10 DPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGHVVTY 69
Query: 456 TPLVPGDYYVSLKYNG-YHIVGSPFKVKCTGKDLGERG 492
TP+ PG+Y +++KY G HIVGSPFK K TG L G
Sbjct: 70 TPMAPGNYLIAIKYGGPQHIVGSPFKAKVTGPRLSGSG 107
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 566 GYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITY 625
G V+AYGPGL G +G F ++T AG+G+ LS+ ++GPSK ++
Sbjct: 12 GLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGA-------------LSVTIDGPSKVQLDC 58
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKF-GEKHIKGSPYLAKITG 667
+ +G V V+Y P APG Y IA+K+ G +HI GSP+ AK+TG
Sbjct: 59 RECPEGHV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTG 100
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 9/97 (9%)
Query: 803 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTG 862
DP V A G GL +GV ++FIV+T NAG+G L+VTIDGPSKV ++ R
Sbjct: 10 DPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSKV-------QLDCRECP 62
Query: 863 RNNFEVKYIVRDRGEYLLIVKWGD-DHIPGSPFKVEV 898
+ V Y G YL+ +K+G HI GSPFK +V
Sbjct: 63 EGHV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKV 98
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 211 VHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVA 270
V A GPGLE G EF V T AG+G+L+++++GPSK ++D ++ +G V+Y
Sbjct: 14 VSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGHV-VTYTPM 72
Query: 271 EPGEYRVGIKFND-QHIPDSPYKLFVS 296
PG Y + IK+ QHI SP+K V+
Sbjct: 73 APGNYLIAIKYGGPQHIVGSPFKAKVT 99
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFAD-HHVEGSPFTAKI 102
G G LS++I+GPSK ++ C++ +G + ++Y P PG Y+I +K+ H+ GSPF AK+
Sbjct: 40 GSGALSVTIDGPSKVQLDCRECPEGHV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKV 98
Query: 103 VG 104
G
Sbjct: 99 TG 100
>pdb|2E9I|A Chain A, Solution Structure Of The N-Terminal Extended 20th Filamin
Domain From Human Filamin-B
Length = 106
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%)
Query: 107 SNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDG 166
S R +E I R A V VGS C L K+P I + D+SA VTSP G +AEI +
Sbjct: 6 SGRVKESITRTSRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKN 65
Query: 167 LYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGG 207
+ V FVP+E+GVHTVSV+Y+ H+ GSPFQFTVGPL +GG
Sbjct: 66 SHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGG 106
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 334 LDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVG 391
+ A V SPSG + I P+ +++ +RF+P+E G+H + +K+ G H+ GSP + VG
Sbjct: 43 MSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVG 100
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 665 ITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGIS 724
IT R + +VGS +++ K+ + + ++A + +PSG + + + +
Sbjct: 13 ITRTSRAPSVATVGSICDLNL--KIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVR 70
Query: 725 FTPREVGSHLVSVKKMGVHIKNSPFKINVG 754
F P+E+G H VSVK G H+ SPF+ VG
Sbjct: 71 FVPQEMGVHTVSVKYRGQHVTGSPFQFTVG 100
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 227 CEFNVWTREAGAGSLAISVEGPS----KAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFN 282
C+ N+ E + ++ V PS +AEI K+ C V +V E G + V +K+
Sbjct: 29 CDLNLKIPEINSSDMSAHVTSPSGRVTEAEI-VPMGKNSHC-VRFVPQEMGVHTVSVKYR 86
Query: 283 DQHIPDSPYKLFVSP 297
QH+ SP++ V P
Sbjct: 87 GQHVTGSPFQFTVGP 101
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 451 YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERG 492
+ VR+ P G + VS+KY G H+ GSPF+ T LGE G
Sbjct: 67 HCVRFVPQEMGVHTVSVKYRGQHVTGSPFQF--TVGPLGEGG 106
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 585 LFTISTKGAG---AGSPFQFTVGPLRDGG 610
+ T+S K G GSPFQFTVGPL +GG
Sbjct: 78 VHTVSVKYRGQHVTGSPFQFTVGPLGEGG 106
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
G+N+ V+++ ++ G + + VK+ H+ GSPF+ V
Sbjct: 63 GKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTV 99
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PSG V + I + + + P+E G+H +++K+ G HV G
Sbjct: 50 PSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTG 92
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 72 ISYRPTEPGYYIINLKFADHHVEGSP--FTAKIVGEG 106
+ + P E G + +++K+ HV GSP FT +GEG
Sbjct: 69 VRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEG 105
>pdb|2D7P|A Chain A, Solution Structure Of The 22th Filamin Domain From Human
Filamin C
Length = 112
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 65/92 (70%)
Query: 301 DAHKLEIAQFPQGVVMADKPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSI 360
DA +L + + + ++P F V+ NGA G +DA+V +PSG ++C++ +D D ++I
Sbjct: 10 DARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDARVHTPSGAVEECYVSELDSDKHTI 69
Query: 361 RFMPRENGIHNIHIKFNGVHIPGSPLRIKVGK 392
RF+P ENG+H+I +KFNG HIPGSP +I+VG+
Sbjct: 70 RFIPHENGVHSIDVKFNGAHIPGSPFKIRVGE 101
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPL 203
+ A V +P G E+ ++E++ + + F+P E GVH++ V++ HIPGSPF+ VG
Sbjct: 43 IDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQ 102
Query: 204 RDGGA 208
G+
Sbjct: 103 SQAGS 107
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGER 756
++A + PSG E C++ ++ + I F P E G H + VK G HI SPFKI VGE+
Sbjct: 43 IDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQ 102
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 424 NAGAGTLAVTIDGPSKVSMDCTEVE---EGYKVRYTPLVPGDYYVSLKYNGYHIVGSPFK 480
N G + + PS +C E + + +R+ P G + + +K+NG HI GSPFK
Sbjct: 37 NGARGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFK 96
Query: 481 VK 482
++
Sbjct: 97 IR 98
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 224 NQPCEFNVWTREAGAGSLAISVEGPSKA--EIDFKDRKDGSCYVSYVVAEPGEYRVGIKF 281
NQP F V A G + V PS A E + + ++ E G + + +KF
Sbjct: 27 NQPASFAVQLNGA-RGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKF 85
Query: 282 NDQHIPDSPYKLFV 295
N HIP SP+K+ V
Sbjct: 86 NGAHIPGSPFKIRV 99
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 831 NAGAGTLAVTIDGPSKVSVKKYKDEIFT-RHTGRNNFEVKYIVRDRGEYLLIVKWGDDHI 889
N G + + PS + Y E+ + +HT +++I + G + + VK+ HI
Sbjct: 37 NGARGVIDARVHTPSGAVEECYVSELDSDKHT------IRFIPHENGVHSIDVKFNGAHI 90
Query: 890 PGSPFKVEV 898
PGSPFK+ V
Sbjct: 91 PGSPFKIRV 99
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PSG V++ + + ++ + P E G+H + +KFNG H+ G
Sbjct: 50 PSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPG 92
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 33 LALKFNGDHVQGYGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFAD 90
A++ NG G + + PS A +C + I + P E G + I++KF
Sbjct: 32 FAVQLNG----ARGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNG 87
Query: 91 HHVEGSPFTAKIVGEGSN 108
H+ GSPF + VGE S
Sbjct: 88 AHIPGSPFKIR-VGEQSQ 104
>pdb|2EEB|A Chain A, Solution Structure Of The 22th Filamin Domain From Human
Filamin-B
Length = 106
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 62/92 (67%)
Query: 301 DAHKLEIAQFPQGVVMADKPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSI 360
DA +L + + + ++P F +R NGA G +DAKV SPSG ++C + ++ D Y++
Sbjct: 10 DARRLTVMSLQESGLKVNQPASFAIRLNGAKGKIDAKVHSPSGAVEECHVSELEPDKYAV 69
Query: 361 RFMPRENGIHNIHIKFNGVHIPGSPLRIKVGK 392
RF+P ENG+H I +KFNG H+ GSP +++VG+
Sbjct: 70 RFIPHENGVHTIDVKFNGSHVVGSPFKVRVGE 101
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVG 201
+ A V SP G E+ ++E+E YAV F+P E GVHT+ V++ H+ GSPF+ VG
Sbjct: 43 IDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKFNGSHVVGSPFKVRVG 100
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGE 755
++A + +PSG E C + ++ + F P E G H + VK G H+ SPFK+ VGE
Sbjct: 43 IDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKFNGSHVVGSPFKVRVGE 101
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 424 NAGAGTLAVTIDGPSKVSMDC--TEVE-EGYKVRYTPLVPGDYYVSLKYNGYHIVGSPFK 480
N G + + PS +C +E+E + Y VR+ P G + + +K+NG H+VGSPFK
Sbjct: 37 NGAKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKFNGSHVVGSPFK 96
Query: 481 VK 482
V+
Sbjct: 97 VR 98
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 33 LALKFNGDHVQGYGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFAD 90
A++ NG G + + PS A +C + + + P E G + I++KF
Sbjct: 32 FAIRLNG----AKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKFNG 87
Query: 91 HHVEGSPFTAKI 102
HV GSPF ++
Sbjct: 88 SHVVGSPFKVRV 99
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PSG V++ + + ++ + P E G+H + +KFNG HV G
Sbjct: 50 PSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKFNGSHVVG 92
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 224 NQPCEFNVWTREAGAGSLAISVEGPSKA--EIDFKDRKDGSCYVSYVVAEPGEYRVGIKF 281
NQP F + A G + V PS A E + + V ++ E G + + +KF
Sbjct: 27 NQPASFAIRLNGA-KGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKF 85
Query: 282 NDQHIPDSPYKLFV 295
N H+ SP+K+ V
Sbjct: 86 NGSHVVGSPFKVRV 99
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 864 NNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ + V++I + G + + VK+ H+ GSPFKV V
Sbjct: 65 DKYAVRFIPHENGVHTIDVKFNGSHVVGSPFKVRV 99
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 16/86 (18%)
Query: 582 EPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKA--EITYHDNKDGTVAVSYLP 639
+P F I GA G + V PS A E + + AV ++P
Sbjct: 28 QPASFAIRLNGA--------------KGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIP 73
Query: 640 TAPGEYKIAVKFGEKHIKGSPYLAKI 665
G + I VKF H+ GSP+ ++
Sbjct: 74 HENGVHTIDVKFNGSHVVGSPFKVRV 99
>pdb|2DLG|A Chain A, Solution Structure Of The 20th Filamin Domain From Human
Filamin-B
Length = 102
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 56/81 (69%)
Query: 123 VTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTV 182
V VGS C L K+P I + D+SA VTSP G +AEI + + V FVP+E+GVHTV
Sbjct: 12 VATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTV 71
Query: 183 SVRYKDIHIPGSPFQFTVGPL 203
SV+Y+ H+ GSPFQFTVGPL
Sbjct: 72 SVKYRGQHVTGSPFQFTVGPL 92
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 334 LDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVG 391
+ A V SPSG + I P+ +++ +RF+P+E G+H + +K+ G H+ GSP + VG
Sbjct: 33 MSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVG 90
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 668 EGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTP 727
GR + +VGS +++ K+ + + ++A + +PSG + + + + F P
Sbjct: 6 SGRAPSVATVGSICDLNL--KIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVP 63
Query: 728 REVGSHLVSVKKMGVHIKNSPFKINVG 754
+E+G H VSVK G H+ SPF+ VG
Sbjct: 64 QEMGVHTVSVKYRGQHVTGSPFQFTVG 90
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 227 CEFNVWTREAGAGSLAISVEGPS----KAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFN 282
C+ N+ E + ++ V PS +AEI K+ C V +V E G + V +K+
Sbjct: 19 CDLNLKIPEINSSDMSAHVTSPSGRVTEAEI-VPMGKNSHC-VRFVPQEMGVHTVSVKYR 76
Query: 283 DQHIPDSPYKLFVSP 297
QH+ SP++ V P
Sbjct: 77 GQHVTGSPFQFTVGP 91
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 448 EEGYKVRYTPLVPGDYYVSLKYNGYHIVGSPFK 480
+ + VR+ P G + VS+KY G H+ GSPF+
Sbjct: 54 KNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQ 86
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
G+N+ V+++ ++ G + + VK+ H+ GSPF+ V
Sbjct: 53 GKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTV 89
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PSG V + I + + + P+E G+H +++K+ G HV G
Sbjct: 40 PSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTG 82
>pdb|2DI8|A Chain A, Solution Structure Of The 19th Filamin Domain From Human
Filamin-B
Length = 111
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 49/63 (77%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
GYGG+SL++EGPSK +IQ +D DG+ +SY PT PG YI++ KFAD HV GSPFT KI
Sbjct: 40 GYGGISLAVEGPSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKIS 99
Query: 104 GEG 106
GEG
Sbjct: 100 GEG 102
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 13/108 (12%)
Query: 571 YGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHDNKD 630
YG GL G + E F + T+ AG G G+S+AVEGPSK +I D +D
Sbjct: 17 YGRGLSEGRTFEMSDFIVDTRDAGYG-------------GISLAVEGPSKVDIQTEDLED 63
Query: 631 GTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVG 678
GT VSY PT PG Y ++ KF ++H+ GSP+ KI+GEGR ++ S G
Sbjct: 64 GTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGEGRVKSGPSSG 111
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSY 267
A R G GL G + +F V TR+AG G ++++VEGPSK +I +D +DG+C VSY
Sbjct: 11 ARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDIQTEDLEDGTCKVSY 70
Query: 268 VVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
PG Y V KF D+H+P SP+ + +S
Sbjct: 71 FPTVPGVYIVSTKFADEHVPGSPFTVKIS 99
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 396 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGY-KVR 454
D G GL+E ++ +DFIVDT +AG G +++ ++GPSKV + ++E+G KV
Sbjct: 10 DARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDIQTEDLEDGTCKVS 69
Query: 455 YTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
Y P VPG Y VS K+ H+ GSPF VK +G+
Sbjct: 70 YFPTVPGVYIVSTKFADEHVPGSPFTVKISGE 101
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 803 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTG 862
D G GL+E ++ +DFIVDT +AG G +++ ++GPSKV ++ T
Sbjct: 10 DARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDIQ-------TEDLE 62
Query: 863 RNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+V Y G Y++ K+ D+H+PGSPF V++
Sbjct: 63 DGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKI 98
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPL 203
+S V P V D + ++EDG V + P GV+ VS ++ D H+PGSPF +
Sbjct: 44 ISLAVEGPSKV--DIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKI--- 98
Query: 204 RDGGAHRVHAG 214
G RV +G
Sbjct: 99 --SGEGRVKSG 107
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 321 TQFLV-RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGV 379
+ F+V ++ G + V PS D + ++ + + P G++ + KF
Sbjct: 30 SDFIVDTRDAGYGGISLAVEGPSKV--DIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADE 87
Query: 380 HIPGSPLRIKV 390
H+PGSP +K+
Sbjct: 88 HVPGSPFTVKI 98
>pdb|2DIC|A Chain A, Solution Structure Of The 12th Filamin Domain From Human
Filamin-B
Length = 105
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 210 RVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVV 269
RV A GPGL+ N+P F V TR AG G L I+VEGPS+++I+ +D KDGSC Y+
Sbjct: 13 RVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPSESKINCRDNKDGSCSAEYIP 72
Query: 270 AEPGEYRVGIKFNDQHIPDSPYKLFV 295
PG+Y V I + HIP SP+++ V
Sbjct: 73 FAPGDYDVNITYGGAHIPGSPFRVPV 98
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL + +P +FT+ T+GAG G GL + VEGPS+++I D
Sbjct: 14 VQAQGPGLKEAFTNKPNVFTVVTRGAGIG-------------GLGITVEGPSESKINCRD 60
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
NKDG+ + Y+P APG+Y + + +G HI GSP+ +
Sbjct: 61 NKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPV 98
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG-YKV 453
P+ V A G GL E + F V T AG G L +T++GPS+ ++C + ++G
Sbjct: 9 CQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPSESKINCRDNKDGSCSA 68
Query: 454 RYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
Y P PGDY V++ Y G HI GSPF+V
Sbjct: 69 EYIPFAPGDYDVNITYGGAHIPGSPFRV 96
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKI 102
G GGL +++EGPS+++I C+DN DGS + Y P PG Y +N+ + H+ GSPF +
Sbjct: 40 GIGGLGITVEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPV 98
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 802 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHT 861
P+ V A G GL E + F V T AG G L +T++GPS + +I R
Sbjct: 9 CQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPS-------ESKINCRDN 61
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ +YI G+Y + + +G HIPGSPF+V V
Sbjct: 62 KDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPV 98
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 316 MADKPTQFLVRKNGA-VGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHI 374
+KP F V GA +G L V PS ++ +C DG + S ++P G ++++I
Sbjct: 25 FTNKPNVFTVVTRGAGIGGLGITVEGPSESKINCRDNK-DG-SCSAEYIPFAPGDYDVNI 82
Query: 375 KFNGVHIPGSPLRIKVGKGEADPA 398
+ G HIPGSP R+ V K DP+
Sbjct: 83 TYGGAHIPGSPFRVPV-KDVVDPS 105
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 144 LSATVTSPGGVTEDAEIN--EVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
L TV P +++IN + +DG + ++P G + V++ Y HIPGSPF+ V
Sbjct: 44 LGITVEGP----SESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPV 98
>pdb|2EED|A Chain A, Solution Structure Of The 24th Filamin Domain From Human
Filamin-B
Length = 101
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Query: 803 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTG 862
D + V + G GL++ G K+ F+VD AG+ L + + GP+ +E+ +H G
Sbjct: 10 DASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGPTTPC-----EEVSMKHVG 64
Query: 863 RNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ V Y+V++RG+Y+L VKWG++HIPGSPF V V
Sbjct: 65 NQQYNVTYVVKERGDYVLAVKWGEEHIPGSPFHVTV 100
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSK--AEIDFKDRKDGSCYV 265
A +V + G GL + Q F V +AG+ L I V GP+ E+ K + V
Sbjct: 11 ASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGNQQYNV 70
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFV 295
+YVV E G+Y + +K+ ++HIP SP+ + V
Sbjct: 71 TYVVKERGDYVLAVKWGEEHIPGSPFHVTV 100
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 396 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEV------EE 449
D + V + G GL++ G K+ F+VD AG+ L + + GP + C EV +
Sbjct: 10 DASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGP---TTPCEEVSMKHVGNQ 66
Query: 450 GYKVRYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
Y V Y GDY +++K+ HI GSPF V
Sbjct: 67 QYNVTYVVKERGDYVLAVKWGEEHIPGSPFHV 98
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 52/139 (37%)
Query: 523 DASKVTCKGMGLKKAYAQKQNMFTIHCQDAGSPFKLYVDSIPSGYVTAYGPGLISGVSGE 582
DASKVT KG GL KA+ +++ F + C AGS L + +GP
Sbjct: 10 DASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLL---------IGVHGP-------TT 53
Query: 583 PCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHDNKDGTVAVSYLPTAP 642
PC E++ + V+Y+
Sbjct: 54 PC------------------------------------EEVSMKHVGNQQYNVTYVVKER 77
Query: 643 GEYKIAVKFGEKHIKGSPY 661
G+Y +AVK+GE+HI GSP+
Sbjct: 78 GDYVLAVKWGEEHIPGSPF 96
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 148 VTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
V P E+ + V + Y V +V KE G + ++V++ + HIPGSPF TV
Sbjct: 48 VHGPTTPCEEVSMKHVGNQQYNVTYVVKERGDYVLAVKWGEEHIPGSPFHVTV 100
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 44 GYGGLSLSIEGPSK--AEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G L + + GP+ E+ K + N++Y E G Y++ +K+ + H+ GSPF
Sbjct: 40 GSNMLLIGVHGPTTPCEEVSMKHVGNQQYNVTYVVKERGDYVLAVKWGEEHIPGSPFHVT 99
Query: 102 I 102
+
Sbjct: 100 V 100
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 663 AKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLG 722
+K+T +G ++ VG S SF S + L + P+ E +K + N
Sbjct: 12 SKVTSKGAGLSKAFVGQKS--SFLVDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGNQQYN 69
Query: 723 ISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
+++ +E G ++++VK HI SPF + V
Sbjct: 70 VTYVVKERGDYVLAVKWGEEHIPGSPFHVTV 100
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 28/50 (56%)
Query: 341 PSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
P+ ++ ++ + Y++ ++ +E G + + +K+ HIPGSP + V
Sbjct: 51 PTTPCEEVSMKHVGNQQYNVTYVVKERGDYVLAVKWGEEHIPGSPFHVTV 100
>pdb|1V05|A Chain A, Dimerization Of Human Filamin C: Crystal Structure Of The
Domain 24
Length = 96
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 802 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHT 861
+D + V G GL++ G K F VD AG + V + GP K +E++ +H
Sbjct: 4 SDASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGP-----KTPCEEVYVKHM 58
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
G + V Y V+++G+Y+LIVKWGD+ +PGSPFKV+V
Sbjct: 59 GNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSK--AEIDFKDRKDGSCYV 265
A +V GPGL + Q F V +AG + + V GP E+ K + V
Sbjct: 6 ASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNV 65
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFV 295
+Y V E G+Y + +K+ D+ +P SP+K+ V
Sbjct: 66 TYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEV------E 448
+D + V G GL++ G K F VD AG + V + GP C EV
Sbjct: 4 SDASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKT---PCEEVYVKHMGN 60
Query: 449 EGYKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
Y V YT GDY + +K+ + GSPFKVK
Sbjct: 61 RVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVK 94
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 522 SDASKVTCKGMGLKKAYAQKQNMFTIHCQDAGSPFKL 558
SDASKV +G GL +A+ ++N FT+ C AG+ +
Sbjct: 4 SDASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMM 40
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 44 GYGGLSLSIEGPSK--AEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G + + + GP E+ K + N++Y E G YI+ +K+ D V GSPF K
Sbjct: 35 GTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVK 94
Query: 102 I 102
+
Sbjct: 95 V 95
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSK--AEITY 625
V GPGL G+ FT+ AG + + V GP E+
Sbjct: 9 VVTRGPGLSQAFVGQKNSFTVDCSKAGTNM-------------MMVGVHGPKTPCEEVYV 55
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
+ V+Y G+Y + VK+G++ + GSP+ K+
Sbjct: 56 KHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 156 EDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
E+ + + + +Y V + KE G + + V++ D +PGSPF+ V
Sbjct: 51 EEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 663 AKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLG 722
+K+ G +Q VG + SF S + + + P E ++K + N
Sbjct: 7 SKVVTRGPGLSQAFVGQ--KNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYN 64
Query: 723 ISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
+++T +E G +++ VK + SPFK+ V
Sbjct: 65 VTYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/45 (22%), Positives = 27/45 (60%)
Query: 346 DDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
++ +++ + Y++ + +E G + + +K+ +PGSP ++KV
Sbjct: 51 EEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
>pdb|2DI9|A Chain A, Solution Structure Of The 9th Filamin Domain From Human
Filamin-B
Length = 131
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 184 VRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAI 243
V Y +PGSP+ D +V A GPGLE G +P EF + T+ AG G L +
Sbjct: 9 VTYDGHPVPGSPYTVEASLPPD--PSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGLGL 66
Query: 244 SVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYK 292
+VEGP +A+I+ D DG+C VSY+ +PGEY V I F + HIP SP+K
Sbjct: 67 TVEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFK 115
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 14/114 (12%)
Query: 553 GSPFKLYVDSIPS-GYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGL 611
GSP+ + P V A+GPGL G+ G+P FTI TKGAG G L
Sbjct: 18 GSPYTVEASLPPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGG-------------L 64
Query: 612 SMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
+ VEGP +A+I DN DGT +VSYLPT PGEY + + F E HI GSP+ A I
Sbjct: 65 GLTVEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI 118
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 52 IEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKI 102
+EGP +A+I+C DN DG+ ++SY PT+PG Y +N+ F + H+ GSPF A I
Sbjct: 68 VEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI 118
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 374 IKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVT 433
+ ++G +PGSP ++ DP+ V A G GL G +F +DT AG G L +T
Sbjct: 9 VTYDGHPVPGSPYTVEASL-PPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGLGLT 67
Query: 434 IDGPSKVSMDCTEVEEGY-KVRYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
++GP + ++C++ +G V Y P PG+Y+V++ + HI GSPFK
Sbjct: 68 VEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKA 116
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSV 849
GSP ++ DP+ V A G GL G +F +DT AG G L +T++GP + +
Sbjct: 18 GSPYTVEASL-PPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGLGLTVEGPCEAKI 76
Query: 850 KKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ G V Y+ GEY + + + + HIPGSPFK ++
Sbjct: 77 E-------CSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI 118
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 85 NLKFADHHVEGSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDL 144
++ + H V GSP+T V K++ + VG + T G L
Sbjct: 8 DVTYDGHPVPGSPYT---VEASLPPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGL 64
Query: 145 SATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQ 197
TV P E ++ DG +V ++P + G + V++ ++++HIPGSPF+
Sbjct: 65 GLTVEGP--CEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFK 115
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 359 SIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
S+ ++P + G + ++I F VHIPGSP + +
Sbjct: 87 SVSYLPTKPGEYFVNILFEEVHIPGSPFKADI 118
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 718 NGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
+G +S+ P + G + V++ VHI SPFK ++
Sbjct: 83 DGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI 118
>pdb|3CNK|A Chain A, Crystal Structure Of The Dimerization Domain Of Human
Filamin A
pdb|3CNK|B Chain B, Crystal Structure Of The Dimerization Domain Of Human
Filamin A
Length = 89
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL++ G K+ F VD AG L V + GP +EI +H G +
Sbjct: 2 VVAKGLGLSKAYVGQKSSFTVDCSKAGNNMLLVGVHGPRTPC-----EEILVKHVGSRLY 56
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+++D+GEY L+VKWG +HIPGSP++V V
Sbjct: 57 SVSYLLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 210 RVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSK--AEIDFKDRKDGSCYVSY 267
+V A G GL + Q F V +AG L + V GP EI K VSY
Sbjct: 1 KVVAKGLGLSKAYVGQKSSFTVDCSKAGNNMLLVGVHGPRTPCEEILVKHVGSRLYSVSY 60
Query: 268 VVAEPGEYRVGIKFNDQHIPDSPYKLFV 295
++ + GEY + +K+ +HIP SPY++ V
Sbjct: 61 LLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 49/136 (36%), Gaps = 52/136 (38%)
Query: 526 KVTCKGMGLKKAYAQKQNMFTIHCQDAGSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCL 585
KV KG+GL KAY +++ FT+ C AG+ L V +GP PC
Sbjct: 1 KVVAKGLGLSKAYVGQKSSFTVDCSKAGNNMLL---------VGVHGP-------RTPC- 43
Query: 586 FTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEY 645
EI +VSYL GEY
Sbjct: 44 -----------------------------------EEILVKHVGSRLYSVSYLLKDKGEY 68
Query: 646 KIAVKFGEKHIKGSPY 661
+ VK+G +HI GSPY
Sbjct: 69 TLVVKWGHEHIPGSPY 84
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEV------EEGYKV 453
V A G GL++ G K+ F VD AG L V + GP C E+ Y V
Sbjct: 2 VVAKGLGLSKAYVGQKSSFTVDCSKAGNNMLLVGVHGP---RTPCEEILVKHVGSRLYSV 58
Query: 454 RYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
Y G+Y + +K+ HI GSP++V
Sbjct: 59 SYLLKDKGEYTLVVKWGHEHIPGSPYRV 86
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
L V P E+ + V LY+V ++ K+ G +T+ V++ HIPGSP++ V
Sbjct: 32 LLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 341 PSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
P ++ ++ + YS+ ++ ++ G + + +K+ HIPGSP R+ V
Sbjct: 39 PRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
>pdb|1WLH|A Chain A, Molecular Structure Of The Rod Domain Of Dictyostelium
Filamin
pdb|1WLH|B Chain B, Molecular Structure Of The Rod Domain Of Dictyostelium
Filamin
Length = 311
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 18/278 (6%)
Query: 23 YDPREEGLHELALKFNGDH-VQGYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGY 81
+ P + +H A+ +G H G G ++IEGP+ + DN DG+ ++ + P E G
Sbjct: 21 FQPSKFKIH--AVDPDGVHRTDGGDGFVVTIEGPAPVDPVMVDNGDGTYDVEFEPKEAGD 78
Query: 82 YIINLKFADHHVEGSPFTAKI----VGEGSNRQREKIQRQREAVPV--TEVGSTCKLTFK 135
Y+INL +V G P T + E S + E + + + P T K +
Sbjct: 79 YVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVAR 138
Query: 136 MPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSP 195
G F+++ + P G+ DA++ + DG Y V + G + V+V + I P
Sbjct: 139 TDGGDPFEVA--INGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMP 196
Query: 196 FQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKA-EID 254
V + G +N+ E + G +S+ GP++ +D
Sbjct: 197 ID--VKCIEGANGEDSSFGSFTFTVAAKNKKGEVKTY----GGDKFEVSITGPAEEITLD 250
Query: 255 FKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYK 292
D +DG+ +Y + G + G+K N +HI SP+K
Sbjct: 251 AIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFK 288
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 126/302 (41%), Gaps = 49/302 (16%)
Query: 209 HRVHAGGPGLERGEQNQPCEFNVWT-------REAGAGSLAISVEGPSKAEIDFKDRKDG 261
+ +A GPGL+ GE QP +F + R G +++EGP+ + D DG
Sbjct: 6 EKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPVDPVMVDNGDG 65
Query: 262 SCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKL---------------E 306
+ V + E G+Y + + + ++ P + V PA H E
Sbjct: 66 TYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVFDNAPAE 125
Query: 307 IAQFP---QGVVMADKPTQFLVRKNGAVG-ALDAKVI-SPSGTEDDCFIQPIDGDNYSIR 361
F +GV D F V NG G +DAKV + GT + P++G NY++
Sbjct: 126 FTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEG-NYNVN 184
Query: 362 FMPRENGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSG-VKTDFIV 420
R N I N+ I ++ G D + T A+ K G VKT
Sbjct: 185 VTLRGNPIKNMPID----------VKCIEGANGEDSSFGSFTFTVAAKNKKGEVKT---- 230
Query: 421 DTCNAGAGTLAVTIDGPS-KVSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSP 478
G V+I GP+ ++++D + ++G Y Y+ + G + +K NG HI GSP
Sbjct: 231 ----YGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSP 286
Query: 479 FK 480
FK
Sbjct: 287 FK 288
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 22/240 (9%)
Query: 165 DGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQN 224
DG Y V F PKE G + +++ ++ G P TV P A +A G GL + N
Sbjct: 64 DGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAP--SAEHSYAEGEGLVKVFDN 121
Query: 225 QPCEFNVWT-------REAGAGSLAISVEGPSKAEIDFK--DRKDGSCYVSYVVAEPGEY 275
P EF ++ R G +++ GP +D K D DG+ V Y G Y
Sbjct: 122 APAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNY 181
Query: 276 RVGIKFNDQHIPDSPYKL-FVSPAMGDAHKLEIAQFPQGVVMADKPTQFLVRKNGAVGAL 334
V + I + P + + A G+ F +A K + V+ G
Sbjct: 182 NVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTF----TVAAKNKKGEVKTYGG---- 233
Query: 335 DAKVISPSGTEDDCFIQPIDGDN--YSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGK 392
D +S +G ++ + ID + Y+ + NG + +K NG HI GSP + +G
Sbjct: 234 DKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGN 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 350 IQPIDGDN----YSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVH--AT 403
+ P+ DN Y + F P+E G + I++ +G ++ G P + V + P+A H A
Sbjct: 55 VDPVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTV---KPAPSAEHSYAE 111
Query: 404 GNGLAEIKSGVKTDFIVDTCNA-------GAGTLAVTIDGPSKVSMDC--TEVEEG-YKV 453
G GL ++ +F + + G V I+GP + +D T+ +G Y V
Sbjct: 112 GEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGV 171
Query: 454 RYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERGGQETSSVTVETVQKVAKNKTQ 513
Y V G+Y V++ G I P VKC GE + + TV K + KT
Sbjct: 172 VYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFTVAAKNKKGEVKTY 231
Query: 514 G 514
G
Sbjct: 232 G 232
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 92/245 (37%), Gaps = 61/245 (24%)
Query: 9 PVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQGY----------------------- 45
PV+ DN DGT + ++P+E G + + L +GD+V G+
Sbjct: 57 PVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLV 116
Query: 46 ------------------------GG--LSLSIEGPSKAEIQCK--DNADGSLNISYRPT 77
GG ++I GP + K DN DG+ + Y
Sbjct: 117 KVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAP 176
Query: 78 EPGYYIINLKFADHHVEGSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMP 137
G Y +N+ + ++ P K + EG+N + + T K K
Sbjct: 177 VEGNYNVNVTLRGNPIKNMPIDVKCI-EGANGEDSSFG----SFTFTVAAKNKKGEVKTY 231
Query: 138 GITAFDLSATVTSPG-GVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPF 196
G F++S +T P +T DA N +DG Y + G + V+ HI GSPF
Sbjct: 232 GGDKFEVS--ITGPAEEITLDAIDN--QDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPF 287
Query: 197 QFTVG 201
+ +G
Sbjct: 288 KQVLG 292
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 121/339 (35%), Gaps = 98/339 (28%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNA-------GAGTLAVTIDGPSKVSMDCTEV 447
ADP +A G GL + + F + + G VTI+GP+ V D V
Sbjct: 3 ADPEKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPV--DPVMV 60
Query: 448 EEG---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERGGQETSSVTVETV 504
+ G Y V + P GDY ++L +G ++ G P +VTV+
Sbjct: 61 DNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFP------------------KTVTVKPA 102
Query: 505 QKVAKNKTQGPVIPIFKSDASKVTCKGMGLKKAYAQKQNMFTIHC--------QDAGSPF 556
A +G GL K + FTI D G PF
Sbjct: 103 PS-----------------AEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPF 145
Query: 557 KLYVDSIPSGYVT----------AYGPGLISGVSGE-------------------PCLFT 587
++ ++ P G V YG + V G C+
Sbjct: 146 EVAING-PDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEG 204
Query: 588 ISTKGAGAGSPFQFTVGPLRDGG---------LSMAVEGPSKAEITYH--DNKDGTVAVS 636
+ + + GS F FTV G +++ GP++ EIT DN+DGT +
Sbjct: 205 ANGEDSSFGS-FTFTVAAKNKKGEVKTYGGDKFEVSITGPAE-EITLDAIDNQDGTYTAA 262
Query: 637 YLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQI 675
Y G + VK KHI+GSP+ + G+K ++
Sbjct: 263 YSLVGNGRFSTGVKLNGKHIEGSPFKQVLGNPGKKNPEV 301
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 84/220 (38%), Gaps = 37/220 (16%)
Query: 553 GSPFKLYVDSIPSG-YVTAYGPGLISGVSGEPCLFTI---STKGAG---AGSPFQFTVGP 605
G P + V PS + A G GL+ P FTI TKG G PF+
Sbjct: 92 GFPKTVTVKPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFE----- 146
Query: 606 LRDGGLSMAVEGPS----KAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPY 661
+A+ GP A++T DN DGT V Y G Y + V IK P
Sbjct: 147 -------VAINGPDGLVVDAKVT--DNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPI 197
Query: 662 LAKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRS-----LNASIQAPSGLEEPCFLKKI 716
K EG S GS + + K ++++ SI P+ E L I
Sbjct: 198 DVKCI-EGANGEDSSFGSFT-FTVAAKNKKGEVKTYGGDKFEVSITGPA---EEITLDAI 252
Query: 717 PN--GNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVG 754
N G +++ G VK G HI+ SPFK +G
Sbjct: 253 DNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLG 292
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 39/136 (28%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGD--------------------- 40
P G V + DN+DGT + YD EG + + + G+
Sbjct: 152 PDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSS 211
Query: 41 ---------------HVQGYGG--LSLSIEGPSKA-EIQCKDNADGSLNISYRPTEPGYY 82
V+ YGG +SI GP++ + DN DG+ +Y G +
Sbjct: 212 FGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRF 271
Query: 83 IINLKFADHHVEGSPF 98
+K H+EGSPF
Sbjct: 272 STGVKLNGKHIEGSPF 287
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 72/202 (35%), Gaps = 32/202 (15%)
Query: 570 AYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGP----LRDGG--LSMAVEGPSKAEI 623
A GPGL G +P F I V P DGG + +EGP+ +
Sbjct: 10 AEGPGLDGGECFQPSKFKIHA------------VDPDGVHRTDGGDGFVVTIEGPAPVDP 57
Query: 624 TYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT-----------GEGRKR 672
DN DGT V + P G+Y I + ++ G P + GEG +
Sbjct: 58 VMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVK 117
Query: 673 ---NQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPRE 729
N + + V G +I P GL + +G G+ +
Sbjct: 118 VFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPV 177
Query: 730 VGSHLVSVKKMGVHIKNSPFKI 751
G++ V+V G IKN P +
Sbjct: 178 EGNYNVNVTLRGNPIKNMPIDV 199
>pdb|3RGH|A Chain A, Structure Of Filamin A Immunoglobulin-Like Repeat 10 From
Homo Sapiens
pdb|3RGH|B Chain B, Structure Of Filamin A Immunoglobulin-Like Repeat 10 From
Homo Sapiens
Length = 100
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISV--EGPSKAEIDFKDRKDGSCYV 265
A +V GPGLER + +F V AG+ L I + E AE+ +D DG+ +
Sbjct: 8 ASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEIXSEAGLPAEVYIQDHGDGTHTI 67
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
+Y+ PG Y V IK+ Q +P+ P KL V PA
Sbjct: 68 TYIPLCPGAYTVTIKYGGQPVPNFPSKLQVEPA 100
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 560 VDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPS 619
+D + V GPGL +GE F + AG+ + T+ + GL
Sbjct: 3 MDPFDASKVKCSGPGLERATAGEVGQFQVDCSSAGSA---ELTIEIXSEAGL-------- 51
Query: 620 KAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSP 660
AE+ D+ DGT ++Y+P PG Y + +K+G + + P
Sbjct: 52 PAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFP 92
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 396 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG---YK 452
D + V +G GL +G F VD +AG+ L + I + + + + G +
Sbjct: 7 DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEIXSEAGLPAEVYIQDHGDGTHT 66
Query: 453 VRYTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
+ Y PL PG Y V++KY G + P K++
Sbjct: 67 ITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ 96
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 803 DPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTG 862
D + V +G GL +G F VD +AG+ L + I + + E++ + G
Sbjct: 7 DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEIXSEAGLPA-----EVYIQDHG 61
Query: 863 RNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ YI G Y + +K+G +P P K++V
Sbjct: 62 DGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQV 97
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 46 GGLSLSIEGPSKA----EIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSP 97
G L+IE S+A E+ +D+ DG+ I+Y P PG Y + +K+ V P
Sbjct: 37 GSAELTIEIXSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFP 92
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
+L+ + S G+ + I + DG + + ++P G +TV+++Y +P P + V P
Sbjct: 40 ELTIEIXSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQVEP 99
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 322 QFLVRKNGAVGA-LDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVH 380
QF V + A A L ++ S +G + +IQ ++I ++P G + + IK+ G
Sbjct: 28 QFQVDCSSAGSAELTIEIXSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQP 87
Query: 381 IPGSPLRIKV 390
+P P +++V
Sbjct: 88 VPNFPSKLQV 97
>pdb|2E9J|A Chain A, Solution Structure Of The 14th Filamin Domain From Human
Filamin-B
Length = 119
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 195 PFQFTVGPLRDGGAHRVHAGGPGLERG--EQNQPCEFNVWTREAGAGSLAISV---EGPS 249
PF+ V P D A +V A GPGL + P +F + R+AG G LA+ + EG
Sbjct: 10 PFKVKVLPTYD--ASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITDQEGKP 67
Query: 250 KAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDA 302
K I D KDG+ V+Y+ + G Y +G+ + IP SPY++ + GDA
Sbjct: 68 KRAI-VHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRAT-QTGDA 118
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 59/121 (48%), Gaps = 20/121 (16%)
Query: 555 PFKLYV-DSIPSGYVTAYGPGLIS-GVSGE-PCLFTISTKGAGAGSPFQFTVGPLRDGGL 611
PFK+ V + + VTA GPGL S GV P F I + AG +G L
Sbjct: 10 PFKVKVLPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDAG-------------EGLL 56
Query: 612 SMAV---EGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGE 668
++ + EG K I HDNKDGT AV+Y+P G Y I V +G I SPY + T
Sbjct: 57 AVQITDQEGKPKRAIV-HDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRATQT 115
Query: 669 G 669
G
Sbjct: 116 G 116
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 792 PLRIKVGKGEADPAAVHATGNGLAE--IKSGVKTDFIVDTCNAGAGTLAVTIDG----PS 845
P ++KV D + V A+G GL+ + + + DF +D +AG G LAV I P
Sbjct: 10 PFKVKV-LPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITDQEGKPK 68
Query: 846 KVSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVE 897
+ V KD + V YI G Y++ V +G D IP SP+++
Sbjct: 69 RAIVHDNKD---------GTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIR 111
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 385 PLRIKVGKGEADPAAVHATGNGLAE--IKSGVKTDFIVDTCNAGAGTLAVTI---DGPSK 439
P ++KV D + V A+G GL+ + + + DF +D +AG G LAV I +G K
Sbjct: 10 PFKVKV-LPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITDQEGKPK 68
Query: 440 VSMDCTEVEEGYKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCT 484
++ + Y V Y P G Y + + Y G I SP++++ T
Sbjct: 69 RAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRAT 113
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQF 198
L+ +T G + A +++ +DG YAV ++P + G + + V Y IP SP++
Sbjct: 56 LAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRI 110
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 315 VMADKPTQFLV-RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIH 373
V A P F + ++ G L ++ G + Y++ ++P + G + I
Sbjct: 36 VPASLPVDFAIDARDAGEGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIG 95
Query: 374 IKFNGVHIPGSPLRIK 389
+ + G IP SP RI+
Sbjct: 96 VTYGGDDIPLSPYRIR 111
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 4 GNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
G + ++ DN DGT ++ Y P + G + + + + GD +
Sbjct: 65 GKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDI 103
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 44 GYGGLSLSI---EGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTA 100
G G L++ I EG K I DN DG+ ++Y P + G Y+I + + + SP+
Sbjct: 52 GEGLLAVQITDQEGKPKRAI-VHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRI 110
Query: 101 KIVGEG 106
+ G
Sbjct: 111 RATQTG 116
>pdb|2D7N|A Chain A, Solution Structure Of The 16th Filamin Domain From Human
Filamin C
Length = 93
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 1 MPSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
MPSG +P I DN DGT+++ Y P E+GLH++ +K++G+H+ G
Sbjct: 30 MPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPG 73
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
+L+ V P G T I + +DG V + P E G+H + ++Y HIPGSP QF V
Sbjct: 23 ELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV 80
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 323 FLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIP 382
F V+K G L +V PSG I ++R+ P E G+H + IK++G HIP
Sbjct: 17 FAVQK----GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIP 72
Query: 383 GSPLRIKV 390
GSPL+ V
Sbjct: 73 GSPLQFYV 80
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 239 GSLAISVEGPS--KAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFV 295
G L V PS A + D KDG+ V Y E G +++GIK++ HIP SP + +V
Sbjct: 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV 80
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 590 TKGAGAGSPFQFTVG-PLRDGGLSMAVEGPS--KAEITYHDNKDGTVAVSYLPTAPGEYK 646
+ G+ PF + ++ G L+ V PS A DNKDGT+ V Y PT G ++
Sbjct: 2 SSGSSGLRPFNLVIPFAVQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQ 61
Query: 647 IAVKFGEKHIKGSP 660
+ +K+ HI GSP
Sbjct: 62 MGIKYDGNHIPGSP 75
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 46 GGLSLSIEGPS--KAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPF 98
G L+ + PS A DN DG++ + Y PTE G + + +K+ +H+ GSP
Sbjct: 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPL 76
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 453 VRYTPLVPGDYYVSLKYNGYHIVGSPFK 480
VRY P G + + +KY+G HI GSP +
Sbjct: 50 VRYAPTEKGLHQMGIKYDGNHIPGSPLQ 77
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
L ++ PSG + +G + + + P E G H + +K G HI SP + V
Sbjct: 24 LTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV 80
>pdb|2DIA|A Chain A, Solution Structure Of The 10th Filamin Domain From Human
Filamin-B
Length = 113
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 210 RVHAGGPGLERGEQNQPCEFNVWTREAGAGSL---AISVEGPSKAEIDFKDRKDGSCYVS 266
+V A GPGLE G+ + +V EAG G+L A+S G +KAE+ ++ KDG+ V+
Sbjct: 13 KVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSG-TKAEVSIQNNKDGTYAVT 71
Query: 267 YVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAM 299
YV G Y + +K+ + +P P ++ V PA+
Sbjct: 72 YVPLTAGMYTLTMKYGGELVPHFPARVKVEPAV 104
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL G GE L ++ AG G+ GL + +KAE++ +
Sbjct: 14 VVASGPGLEHGKVGEAGLLSVDCSEAGPGAL-----------GLEAVSDSGTKAEVSIQN 62
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
NKDGT AV+Y+P G Y + +K+G + + P K+
Sbjct: 63 NKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV 100
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 799 KGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFT 858
G DP+ V A+G GL K G VD AG G L G VS K E+
Sbjct: 6 SGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGAL-----GLEAVSDSGTKAEVSI 60
Query: 859 RHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
++ + V Y+ G Y L +K+G + +P P +V+V
Sbjct: 61 QNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV 100
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 392 KGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTI--DGPSKVSMDCTEVEE 449
G DP+ V A+G GL K G VD AG G L + D +K + ++
Sbjct: 6 SGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKD 65
Query: 450 G-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
G Y V Y PL G Y +++KY G + P +VK
Sbjct: 66 GTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVK 99
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 332 GALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
GAL + +S SGT+ + IQ Y++ ++P G++ + +K+ G +P P R+KV
Sbjct: 42 GALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV 100
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 153 GVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRD 205
G + I +DG YAV +VP G++T++++Y +P P + V P D
Sbjct: 53 GTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKVEPAVD 105
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 56 SKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKI 102
+KAE+ ++N DG+ ++Y P G Y + +K+ V P K+
Sbjct: 54 TKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV 100
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
I++N DGT ++ Y P G++ L +K+ G+ V
Sbjct: 60 IQNNKDGTYAVTYVPLTAGMYTLTMKYGGELV 91
>pdb|2D7M|A Chain A, Solution Structure Of The 14th Filamin Domain From Human
Filamin C
Length = 115
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 208 AHRVHAGGPGLERG--EQNQPCEFNVWTREAGAGSLAISV---EG-PSKAEIDFKDRKDG 261
A +V A GPGL + P EF + R+AG G L + + EG P KA I +D DG
Sbjct: 11 ASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANI--RDNGDG 68
Query: 262 SCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDA 302
+ VSY+ G Y + IK+ IP SP+++ P GDA
Sbjct: 69 TYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALP-TGDA 108
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 800 GEADPAAVHATGNGL--AEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIF 857
G D + V A+G GL + I + + +F +D +AG G L V I P K K I
Sbjct: 7 GAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEG---KPKKANI- 62
Query: 858 TRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
R G + V Y+ G Y + +K+G D IP SPF++
Sbjct: 63 -RDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHA 102
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 568 VTAYGPGL-ISGVSGE-PCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITY 625
V A GPGL SG+ P FTI + AG G TV L G P KA I
Sbjct: 14 VRASGPGLNASGIPASLPVEFTIDARDAGEG---LLTVQILDPEGK------PKKANI-- 62
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPY 661
DN DGT VSYLP G Y I +K+G I SP+
Sbjct: 63 RDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPF 98
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 393 GEADPAAVHATGNGL--AEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG 450
G D + V A+G GL + I + + +F +D +AG G L V I P + G
Sbjct: 7 GAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNG 66
Query: 451 ---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKC 483
Y V Y P + G Y +++KY G I SPF++
Sbjct: 67 DGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHA 102
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPL 203
L+ + P G + A I + DG Y V ++P G +T++++Y IP SPF+ P
Sbjct: 46 LTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPT 105
Query: 204 RD 205
D
Sbjct: 106 GD 107
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 315 VMADKPTQFLV-RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIH 373
+ A P +F + ++ G L +++ P G I+ Y++ ++P +G + I
Sbjct: 26 IPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTIT 85
Query: 374 IKFNGVHIPGSPLRI 388
IK+ G IP SP RI
Sbjct: 86 IKYGGDEIPYSPFRI 100
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 55 PSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPF 98
P KA I +DN DG+ +SY P G Y I +K+ + SPF
Sbjct: 57 PKKANI--RDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPF 98
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
P G K I DN DGT ++ Y P G + + +K+ GD +
Sbjct: 53 PEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEI 93
>pdb|2DJ4|A Chain A, Solution Structure Of The 13th Filamin Domain From Human
Filamin-B
Length = 108
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 800 GEADPAAVHATGNGLAE-IKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFT 858
G DP+ V G GL +++ V F VD+ AG L V + GP + + +
Sbjct: 7 GVVDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGP-----RGLVEPVNV 61
Query: 859 RHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
G V Y G Y++ VK+ D+ IP SPFKV+V
Sbjct: 62 VDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKV 101
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 393 GEADPAAVHATGNGLAE-IKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG- 450
G DP+ V G GL +++ V F VD+ AG L V + GP + V+ G
Sbjct: 7 GVVDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGD 66
Query: 451 --YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKC 483
+ V YTP G Y VS+KY I SPFKVK
Sbjct: 67 GTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKV 101
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 210 RVHAGGPGLERGEQNQPCE-FNVWTREAGAGSLAISVEGPSKA--EIDFKDRKDGSCYVS 266
+V GPGL G + + + F V + +AG L + V GP ++ D DG+ V+
Sbjct: 13 KVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVT 72
Query: 267 YVVAEPGEYRVGIKFNDQHIPDSPYKLFVSP 297
Y ++ G Y V +K+ D+ IP SP+K+ V P
Sbjct: 73 YTPSQEGPYMVSVKYADEEIPRSPFKVKVLP 103
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 44 GYGGLSLSIEGPSKA--EIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G L + + GP + DN DG+ ++Y P++ G Y++++K+AD + SPF K
Sbjct: 41 GLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVK 100
Query: 102 IV 103
++
Sbjct: 101 VL 102
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPL 203
L V P G+ E + + DG + V + P + G + VSV+Y D IP SPF+ V P
Sbjct: 45 LEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVLPT 104
Query: 204 RD 205
D
Sbjct: 105 YD 106
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 572 GPGLISGVSGEPCL-FTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHDNKD 630
GPGL SGV FT+ + AG +P + V L GL VE + DN D
Sbjct: 18 GPGLGSGVRARVLQSFTVDSSKAGL-APLEVRV--LGPRGL---VE-----PVNVVDNGD 66
Query: 631 GTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
GT V+Y P+ G Y ++VK+ ++ I SP+ K+
Sbjct: 67 GTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKV 101
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 684 SFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVH 743
SF S + + L + P GL EP + +G +++TP + G ++VSVK
Sbjct: 32 SFTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEE 91
Query: 744 IKNSPFKINV 753
I SPFK+ V
Sbjct: 92 IPRSPFKVKV 101
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 10/62 (16%)
Query: 334 LDAKVISPSGTEDDCFIQPID----GD-NYSIRFMPRENGIHNIHIKFNGVHIPGSPLRI 388
L+ +V+ P G ++P++ GD +++ + P + G + + +K+ IP SP ++
Sbjct: 45 LEVRVLGPRG-----LVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKV 99
Query: 389 KV 390
KV
Sbjct: 100 KV 101
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
P G V+ + DN DGT ++ Y P +EG + +++K+ + +
Sbjct: 52 PRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEI 92
>pdb|4B7L|A Chain A, Crystal Structure Of Human Filamin B Actin Binding Domain
With 1st Filamin Repeat
pdb|4B7L|B Chain B, Crystal Structure Of Human Filamin B Actin Binding Domain
With 1st Filamin Repeat
Length = 347
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 14/108 (12%)
Query: 382 PGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVK--TDFIVDTCNAGAGTLAVTIDGP-- 437
PG+PL+ K+ +P A G G+ + VK F VDT +AG G + V ++ P
Sbjct: 244 PGAPLKPKL-----NPKKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEG 298
Query: 438 ----SKVSMDCTEVEEGYKVRYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
++V+ D ++ + Y V Y P V G + V++ + G HI SPF+V
Sbjct: 299 NKEEAQVTPD-SDKNKTYSVEYLPKVTGLHKVTVLFAGQHISKSPFEV 345
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 570 AYGPGL--ISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEG-PSKAEITYH 626
AYG G+ + +P FT+ T AG G F P EG +A++T
Sbjct: 259 AYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDP----------EGNKEEAQVTPD 308
Query: 627 DNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPY 661
+K+ T +V YLP G +K+ V F +HI SP+
Sbjct: 309 SDKNKTYSVEYLPKVTGLHKVTVLFAGQHISKSPF 343
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 192 PGSPFQFTVGPLRDGGAHRVHAGGPGLER--GEQNQPCEFNVWTREAGAGSLAISVEGPS 249
PG+P + + P + A G G+E QP +F V T AG G + + VE P
Sbjct: 244 PGAPLKPKLNP------KKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPE 297
Query: 250 ----KAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFV 295
+A++ K+ + V Y+ G ++V + F QHI SP+++ V
Sbjct: 298 GNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAGQHISKSPFEVSV 347
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 316 MADKPTQFLVRKNGA-VGALDAKVISPSGTEDDCFIQPIDGDN--YSIRFMPRENGIHNI 372
M +P +F V A G + V P G +++ + P N YS+ ++P+ G+H +
Sbjct: 270 MVKQPAKFTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKV 329
Query: 373 HIKFNGVHIPGSPLRIKV 390
+ F G HI SP + V
Sbjct: 330 TVLFAGQHISKSPFEVSV 347
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDG--LYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
D+ V P G E+A++ D Y+V ++PK G+H V+V + HI SPF+ +V
Sbjct: 288 DVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAGQHISKSPFEVSV 347
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVK--TDFIVDTCNAGAGTLAVTIDGPSKV 847
G+PL+ K+ +P A G G+ + VK F VDT +AG G + V ++ P
Sbjct: 245 GAPLKPKL-----NPKKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEG- 298
Query: 848 SVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
K + ++ + V+Y+ + G + + V + HI SPF+V V
Sbjct: 299 --NKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAGQHISKSPFEVSV 347
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 36 KFNGDHVQ-GYGGLSLSIEGP--SKAEIQCKDNADG--SLNISYRPTEPGYYIINLKFAD 90
KF D + G G + + +E P +K E Q ++D + ++ Y P G + + + FA
Sbjct: 276 KFTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAG 335
Query: 91 HHVEGSPFTAKI 102
H+ SPF +
Sbjct: 336 QHISKSPFEVSV 347
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 718 NGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
N + + P+ G H V+V G HI SPF+++V
Sbjct: 312 NKTYSVEYLPKVTGLHKVTVLFAGQHISKSPFEVSV 347
>pdb|2EE9|A Chain A, Solution Structure Of The 16th Filamin Domain From Human
Filamin-B
Length = 95
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 1 MPSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHV 42
MPSG P I DN DGTV++ Y P E GLHE+ +K+ G H+
Sbjct: 38 MPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHI 79
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
+++ V P G T EI + +DG V + P E+G+H + ++Y HIP SP QF V
Sbjct: 31 EITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYV 88
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 323 FLVRKNGAVGALDAKVISPSG-TEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHI 381
F VRK G + +V PSG T + DG ++R+ P E G+H +HIK+ G HI
Sbjct: 25 FAVRK----GEITGEVHMPSGKTATPEIVDNKDG-TVTVRYAPTEVGLHEMHIKYMGSHI 79
Query: 382 PGSPLRIKV 390
P SPL+ V
Sbjct: 80 PESPLQFYV 88
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 598 PFQFTVG-PLRDGGLSMAVEGPSKAEITYH--DNKDGTVAVSYLPTAPGEYKIAVKFGEK 654
PF + +R G ++ V PS T DNKDGTV V Y PT G +++ +K+
Sbjct: 18 PFDLVIPFAVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGS 77
Query: 655 HIKGSP 660
HI SP
Sbjct: 78 HIPESP 83
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 239 GSLAISVEGPS--KAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
G + V PS A + D KDG+ V Y E G + + IK+ HIP+SP + +V+
Sbjct: 30 GEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYVN 89
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
+ + PSG + +G + + + P EVG H + +K MG HI SP + V
Sbjct: 32 ITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYV 88
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 58 AEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPF 98
A + DN DG++ + Y PTE G + +++K+ H+ SP
Sbjct: 44 ATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPL 84
>pdb|2DMB|A Chain A, Solution Structure Of The 15th Filamin Domain From Human
Filamin-B
Length = 124
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 396 DPAAVHATGNGLAE-IKSGVKTDFIVDTCNAGAGTLAVTIDGP--SKVSMDCTEVEEG-Y 451
D + ATG G+A +K+G + F+VD AG G + T+ P ++ D E E+G Y
Sbjct: 10 DASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTEAEADVIENEDGTY 69
Query: 452 KVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCT 484
+ YT PG Y + +++ G I SPF V T
Sbjct: 70 DIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMAT 102
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 208 AHRVHAGGPGLERG-EQNQPCEFNVWTREAGAGSLAISVEGP--SKAEIDFKDRKDGSCY 264
A + A GPG+ + + F V + AG G + +V P ++AE D + +DG+
Sbjct: 11 ASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTEAEADVIENEDGTYD 70
Query: 265 VSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
+ Y A+PG Y + ++F IP+SP+ + +
Sbjct: 71 IFYTAAKPGTYVIYVRFGGVDIPNSPFTVMAT 102
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 570 AYGPGLISGV-SGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHDN 628
A GPG+ S V +GE F + K AG G + P DG ++AE +N
Sbjct: 16 ATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTP--DG---------TEAEADVIEN 64
Query: 629 KDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT-GEGRKRNQISVGSC 680
+DGT + Y PG Y I V+FG I SP+ T GE + V +C
Sbjct: 65 EDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMATDGEVTAVEEAPVNAC 117
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPF 196
++ TV +P G +A++ E EDG Y + + + G + + VR+ + IP SPF
Sbjct: 45 VTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPF 97
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 803 DPAAVHATGNGLAE-IKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHT 861
D + ATG G+A +K+G + F+VD AG G + T+ P + ++
Sbjct: 10 DASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTEAEA---DVIENED 66
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKV 896
G +++ Y G Y++ V++G IP SPF V
Sbjct: 67 G--TYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTV 99
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 323 FLV-RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHI 381
F+V K G + V++P GTE + + + Y I + + G + I+++F GV I
Sbjct: 33 FVVDAKTAGKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDI 92
Query: 382 PGSPLRIKVGKGE 394
P SP + GE
Sbjct: 93 PNSPFTVMATDGE 105
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 44 GYGGLSLSIEGP--SKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFT 99
G G ++ ++ P ++AE +N DG+ +I Y +PG Y+I ++F + SPFT
Sbjct: 41 GKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFT 98
>pdb|2DS4|A Chain A, Solution Structure Of The Filamin Domain From Human
Tripartite Motif Protein 45
Length = 113
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 33 LALKFNGDHVQGYGGLSLSI--------EGPSKAEIQCKDNADGSLNISYRPTEPGYYII 84
L K + G GG ++ + + P + +Q DN DG+ ISY P EPG Y +
Sbjct: 34 LLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVRTMVQ--DNKDGTYYISYTPKEPGVYTV 91
Query: 85 NLKFADHHVEGSPFTAKI 102
+ + HV+GSPFT +
Sbjct: 92 WVCIKEQHVQGSPFTVTV 109
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
DNKDGT +SY P PG Y + V E+H++GSP+ +
Sbjct: 70 QDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTV 109
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 215 GPGLERGEQNQPCEFNVWTREA-----GAGSLAISVEGPSKAEID------FKDRKDGSC 263
G L R + Q F + ++A G G + V K + D +D KDG+
Sbjct: 18 GEDLHRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTY 77
Query: 264 YVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFV 295
Y+SY EPG Y V + +QH+ SP+ + V
Sbjct: 78 YISYTPKEPGVYTVWVCIKEQHVQGSPFTVTV 109
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 160 INEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
+ + +DG Y + + PKE GV+TV V K+ H+ GSPF TV
Sbjct: 69 VQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTV 109
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 1 MPSGNVDKPV---IEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
+P D PV ++DN DGT + Y P+E G++ + + HVQG
Sbjct: 56 VPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQG 102
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 14/102 (13%)
Query: 393 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTL---------AVTIDGPSKVSMD 443
GE DPA G L + F + C AG + + K S
Sbjct: 7 GEVDPAKCVLQGEDLHRAREKQTASFTL-LCKDAAGEIMGRGGDNVQVAVVPKDKKDSPV 65
Query: 444 CTEVEEG----YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
T V++ Y + YTP PG Y V + H+ GSPF V
Sbjct: 66 RTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTV 107
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Query: 800 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTR 859
GE DPA G L + F + +A + D V K K + R
Sbjct: 7 GEVDPAKCVLQGEDLHRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVR 66
Query: 860 HTGRNN----FEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
++N + + Y ++ G Y + V + H+ GSPF V V
Sbjct: 67 TMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTV 109
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 718 NGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
+G IS+TP+E G + V V H++ SPF + V
Sbjct: 74 DGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTV 109
>pdb|2DIB|A Chain A, Solution Structure Of The 11th Filamin Domain From Human
Filamin-B
Length = 128
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 290 PYKLFVSPAMGDAHKLEIAQFPQGV----VMADKPTQFLV--RKNGAVGA--LDAKVISP 341
P ++ V PA+ D ++++ F G+ V + T F V R VG + A + +P
Sbjct: 10 PARVKVEPAV-DTSRIKV--FGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAHIANP 66
Query: 342 SGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKG 393
SG +CF+ Y + + P E G+H + + ++ V IP SP ++ V +G
Sbjct: 67 SGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVTEG 118
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
+ A + +P G + + + + DG Y V + P E G+H V V Y D+ IP SPF+ V
Sbjct: 59 IKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAV 115
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGE 755
+ A I PSG CF+ +G + +TP E G H+V V V I NSPFK+ V E
Sbjct: 59 IKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVTE 117
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 36 KFNGDHVQGYGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFADHHV 93
+ GDH++ + I PS A +C DNADG+ + Y P E G +++ + + D +
Sbjct: 53 QVGGDHIKAH------IANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPI 106
Query: 94 EGSPFTAKI 102
SPF +
Sbjct: 107 PNSPFKVAV 115
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 385 PLRIKVGKGEADPAAVHATGNGLA--EIKSGVKTDFIVDT---CNAGAGTLAVTIDGPSK 439
P R+KV + D + + G G+ ++ TDF VD+ G + I PS
Sbjct: 10 PARVKV-EPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAHIANPSG 68
Query: 440 VSMDC--TEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCT 484
S +C T+ +G Y+V YTP G + V + Y+ I SPFKV T
Sbjct: 69 ASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVT 116
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 792 PLRIKVGKGEADPAAVHATGNGLA--EIKSGVKTDFIVDT---CNAGAGTLAVTIDGPSK 846
P R+KV + D + + G G+ ++ TDF VD+ G + I PS
Sbjct: 10 PARVKV-EPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAHIANPSG 68
Query: 847 VSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
S E F ++V+Y ++G +++ V + D IP SPFKV V
Sbjct: 69 AST-----ECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAV 115
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 195 PFQFTVGPLRDGGAHRVHAGGPGLERGE--QNQPCEFNVWTR---EAGAGSLAISVEGPS 249
P + V P D R+ GPG+E + + +F V +R + G + + PS
Sbjct: 10 PARVKVEPAVD--TSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAHIANPS 67
Query: 250 KA--EIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVS 296
A E D DG+ V Y E G + V + ++D IP+SP+K+ V+
Sbjct: 68 GASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVT 116
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFN 38
PSG + + DN DGT + Y P E+GLH + + ++
Sbjct: 66 PSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYD 102
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 619 SKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT 666
+ E DN DGT V Y P G + + V + + I SP+ +T
Sbjct: 69 ASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVT 116
>pdb|1QFH|A Chain A, Dimerization Of Gelation Factor From Dictyostelium
Discoideum: Crystal Structure Of Rod Domains 5 And 6
pdb|1QFH|B Chain B, Dimerization Of Gelation Factor From Dictyostelium
Discoideum: Crystal Structure Of Rod Domains 5 And 6
Length = 212
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 7/150 (4%)
Query: 144 LSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPL 203
+ P G+ DA++ + DG Y V + G + V+V + I P V +
Sbjct: 46 FEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPID--VKCI 103
Query: 204 RDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKA-EIDFKDRKDGS 262
G +N+ E + G +S+ GP++ +D D +DG+
Sbjct: 104 EGANGEDSSFGSFTFTVAAKNKKGEVKTY----GGDKFEVSITGPAEEITLDAIDNQDGT 159
Query: 263 CYVSYVVAEPGEYRVGIKFNDQHIPDSPYK 292
+Y + G + G+K N +HI SP+K
Sbjct: 160 YTAAYSLVGNGRFSTGVKLNGKHIEGSPFK 189
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 21/203 (10%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWT-------REAGAGSLAISVEGPSKAEIDFK--DR 258
A +A G GL + N P EF ++ R G +++ GP +D K D
Sbjct: 6 AEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDN 65
Query: 259 KDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKL-FVSPAMGDAHKLEIAQFPQGVVMA 317
DG+ V Y G Y V + I + P + + A G+ F +A
Sbjct: 66 NDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTF----TVA 121
Query: 318 DKPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDN--YSIRFMPRENGIHNIHIK 375
K + V+ G D +S +G ++ + ID + Y+ + NG + +K
Sbjct: 122 AKNKKGEVKTYGG----DKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVK 177
Query: 376 FNGVHIPGSPLRIKVGK-GEADP 397
NG HI GSP + +G G+ +P
Sbjct: 178 LNGKHIEGSPFKQVLGNPGKKNP 200
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 312 QGVVMADKPTQFLVRKNGAVG-ALDAKVISPS-GTEDDCFIQPIDGDNYSIRFMPRENGI 369
+GV D F V NG G +DAKV + GT + P++G NY++ R N I
Sbjct: 35 KGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEG-NYNVNVTLRGNPI 93
Query: 370 HNIHIKFNGVHIPGSPLRIKV--GKGEADPAAVHATGNGLAEIKSG-VKTDFIVDTCNAG 426
N+ P+ +K G D + T A+ K G VKT G
Sbjct: 94 KNM------------PIDVKCIEGANGEDSSFGSFTFTVAAKNKKGEVKT--------YG 133
Query: 427 AGTLAVTIDGPSK-VSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFK 480
V+I GP++ +++D + ++G Y Y+ + G + +K NG HI GSPFK
Sbjct: 134 GDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFK 189
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 576 ISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGG---------LSMAVEGPSKAEITYH 626
I G +GE F F FTV G +++ GP++ EIT
Sbjct: 103 IEGANGEDSSF----------GSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAE-EITLD 151
Query: 627 --DNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQI 675
DN+DGT +Y G + VK KHI+GSP+ + G+K ++
Sbjct: 152 AIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGNPGKKNPEV 202
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 77/202 (38%), Gaps = 36/202 (17%)
Query: 570 AYGPGLISGVSGEPCLFTI---STKGAG---AGSPFQFTVGPLRDGGLSMAVEGPS---- 619
A G GL+ P FTI TKG G PF+ +A+ GP
Sbjct: 11 AEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFE------------VAINGPDGLVV 58
Query: 620 KAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVGS 679
A++T DN DGT V Y G Y + V IK P K EG S GS
Sbjct: 59 DAKVT--DNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCI-EGANGEDSSFGS 115
Query: 680 CSEVSFPGKVSDSDIRS-----LNASIQAPSGLEEPCFLKKIPN--GNLGISFTPREVGS 732
+ + K ++++ SI P+ E L I N G +++ G
Sbjct: 116 FT-FTVAAKNKKGEVKTYGGDKFEVSITGPA---EEITLDAIDNQDGTYTAAYSLVGNGR 171
Query: 733 HLVSVKKMGVHIKNSPFKINVG 754
VK G HI+ SPFK +G
Sbjct: 172 FSTGVKLNGKHIEGSPFKQVLG 193
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 39/136 (28%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGD--------------------- 40
P G V + DN+DGT + YD EG + + + G+
Sbjct: 53 PDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSS 112
Query: 41 ---------------HVQGYGG--LSLSIEGPSKA-EIQCKDNADGSLNISYRPTEPGYY 82
V+ YGG +SI GP++ + DN DG+ +Y G +
Sbjct: 113 FGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRF 172
Query: 83 IINLKFADHHVEGSPF 98
+K H+EGSPF
Sbjct: 173 STGVKLNGKHIEGSPF 188
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 48 LSLSIEGPSKAEIQCK--DNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIVGE 105
++I GP + K DN DG+ + Y G Y +N+ + ++ P K + E
Sbjct: 46 FEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCI-E 104
Query: 106 GSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPG-GVTEDAEINEVE 164
G+N + + T K K G F++S +T P +T DA N +
Sbjct: 105 GANGEDSSFG----SFTFTVAAKNKKGEVKTYGGDKFEVS--ITGPAEEITLDAIDN--Q 156
Query: 165 DGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVG 201
DG Y + G + V+ HI GSPF+ +G
Sbjct: 157 DGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLG 193
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 397 PAAVH--ATGNGLAEIKSGVKTDFIVDTCNA-------GAGTLAVTIDGPSKVSMDC--T 445
P+A H A G GL ++ +F + + G V I+GP + +D T
Sbjct: 4 PSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVT 63
Query: 446 EVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERGGQETSSVTVETV 504
+ +G Y V Y V G+Y V++ G I P VKC GE + + TV
Sbjct: 64 DNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFTVAAK 123
Query: 505 QKVAKNKTQG 514
K + KT G
Sbjct: 124 NKKGEVKTYG 133
>pdb|1KSR|A Chain A, The Repeating Segments Of The F-Actin Cross-Linking
Gelation Factor (Abp-120) Have An Immunoglobulin Fold,
Nmr, 20 Structures
Length = 100
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 41 HVQGYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTA 100
G G ++IEGP+ + DN DG+ ++ + P E G Y+INL +V G P T
Sbjct: 36 RTDGGDGFVVTIEGPAPVDPVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTV 95
Query: 101 KI 102
+
Sbjct: 96 TV 97
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 209 HRVHAGGPGLERGEQNQPCEFNVWT-------REAGAGSLAISVEGPSKAEIDFKDRKDG 261
+ +A GPGL+ GE QP +F + R G +++EGP+ + D DG
Sbjct: 4 EKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPVDPVMVDNGDG 63
Query: 262 SCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
+ V + E G+Y + + + ++ P + V PA
Sbjct: 64 TYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPA 100
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 9 PVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQGY 45
PV+ DN DGT + ++P+E G + + L +GD+V G+
Sbjct: 55 PVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGF 91
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 18/97 (18%)
Query: 570 AYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGP----LRDGG--LSMAVEGPSKAEI 623
A GPGL G +P F I V P DGG + +EGP+ +
Sbjct: 8 AEGPGLDGGECFQPSKFKIHA------------VDPDGVHRTDGGDGFVVTIEGPAPVDP 55
Query: 624 TYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSP 660
DN DGT V + P G+Y I + ++ G P
Sbjct: 56 VMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFP 92
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNA-------GAGTLAVTIDGPSKVSMDCTEV 447
ADP +A G GL + + F + + G VTI+GP+ V +
Sbjct: 1 ADPEKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPVDPVMVDN 60
Query: 448 EEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKV 481
+G Y V + P GDY ++L +G ++ G P V
Sbjct: 61 GDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTV 95
>pdb|2DI7|A Chain A, Solution Structure Of The Filamin Domain From Human
Bk158_1 Protein
Length = 124
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 230 NVWTREAGAGSLAISVEGP----SKAEIDFKDRKDGSCYVSY-VVAEPGEYRVGIKFNDQ 284
N +T G + V P ++ + DRKDGS V Y + A +V IKF Q
Sbjct: 48 NKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQGQ 107
Query: 285 HIPDSPYKL 293
H+ SPY L
Sbjct: 108 HVAKSPYIL 116
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 571 YGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGP---LRDGGLSMAVEGPSKAEITYHD 627
+GPGL + V F I +FT P + +S E ++ + D
Sbjct: 23 WGPGLKADVVLPARYFYIQAVDTSGN---KFTSSPGEKVFQVKVSAPEEQFTRVGVQVLD 79
Query: 628 NKDGTVAVSY-LPTAPGEYKIAVKFGEKHIKGSPYLAKITG 667
KDG+ V Y + + K+ +KF +H+ SPY+ K +G
Sbjct: 80 RKDGSFIVRYRMYASYKNLKVEIKFQGQHVAKSPYILKGSG 120
>pdb|4GX5|A Chain A, Gsuk Channel
pdb|4GX5|B Chain B, Gsuk Channel
pdb|4GX5|C Chain C, Gsuk Channel
pdb|4GX5|D Chain D, Gsuk Channel
Length = 565
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 85 NLKFADHHVEGSPFTAKIVGEGSNRQR 111
NL+ A+ V G+PF K +GE RQR
Sbjct: 271 NLQIAELPVHGTPFAGKTIGESGIRQR 297
>pdb|4GX0|A Chain A, Crystal Structure Of The Gsuk L97d Mutant
pdb|4GX0|B Chain B, Crystal Structure Of The Gsuk L97d Mutant
pdb|4GX0|C Chain C, Crystal Structure Of The Gsuk L97d Mutant
pdb|4GX0|D Chain D, Crystal Structure Of The Gsuk L97d Mutant
pdb|4GX1|A Chain A, Crystal Structure Of The Gsuk Bound To Adp
pdb|4GX1|B Chain B, Crystal Structure Of The Gsuk Bound To Adp
pdb|4GX1|C Chain C, Crystal Structure Of The Gsuk Bound To Adp
pdb|4GX1|D Chain D, Crystal Structure Of The Gsuk Bound To Adp
pdb|4GX2|A Chain A, Gsuk Channel Bound To Nad
pdb|4GX2|B Chain B, Gsuk Channel Bound To Nad
pdb|4GX2|C Chain C, Gsuk Channel Bound To Nad
pdb|4GX2|D Chain D, Gsuk Channel Bound To Nad
Length = 565
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 85 NLKFADHHVEGSPFTAKIVGEGSNRQR 111
NL+ A+ V G+PF K +GE RQR
Sbjct: 271 NLQIAELPVHGTPFAGKTIGESGIRQR 297
>pdb|4GVL|A Chain A, Crystal Structure Of The Gsuk Rck Domain
pdb|4GVL|B Chain B, Crystal Structure Of The Gsuk Rck Domain
pdb|4GVL|C Chain C, Crystal Structure Of The Gsuk Rck Domain
pdb|4GVL|D Chain D, Crystal Structure Of The Gsuk Rck Domain
Length = 462
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 85 NLKFADHHVEGSPFTAKIVGEGSNRQR 111
NL+ A+ V G+PF K +GE RQR
Sbjct: 168 NLQIAELPVHGTPFAGKTIGESGIRQR 194
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 480 KVKCTGKDLGERGG---QETSSVTVETVQKVAKNKTQGPVIPIFK 521
+V C GK ERGG Q T V V KV+K +T GP+ P+F+
Sbjct: 352 RVVCGGK-AHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFR 395
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 480 KVKCTGKDLGERGG---QETSSVTVETVQKVAKNKTQGPVIPIFK 521
+V C GK ERGG Q T V V KV+K +T GP+ P+F+
Sbjct: 352 RVVCGGK-AHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFR 395
>pdb|3PXI|A Chain A, Structure Of Meca108:clpc
pdb|3PXI|B Chain B, Structure Of Meca108:clpc
pdb|3PXI|C Chain C, Structure Of Meca108:clpc
Length = 758
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 480 KVKCTGKDLGERGGQETSSVTVETVQKVAKNKTQGPVIPIFKSDASKV 527
+V+ T K E+ GQE S VTV+ + V + T PV I +++ K+
Sbjct: 435 QVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKL 482
>pdb|1SIJ|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A.
Aor Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
pdb|1VLB|A Chain A, Structure Refinement Of The Aldehyde Oxidoreductase From
Desulfovibrio Gigas At 1.28 A
pdb|3FAH|A Chain A, Glycerol Inhibited Form Of Aldehyde Oxidoreductase From
Desulfovibrio Gigas
pdb|3FC4|A Chain A, Ethylene Glycol Inhibited Form Of Aldehyde Oxidoreductase
From Desulfovibrio Gigas
pdb|3L4P|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A.
Aor Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
Length = 907
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 536 KAYAQKQNMFTIHCQDAGSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTI------- 588
+ Y Q+MF C KL +D + Y AY PG + EP +F++
Sbjct: 533 RGYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRPGDTNPTGQEPEVFSLPDMIDQL 592
Query: 589 --STKGAGAGSPFQFTVGPLRDGGLSMAV-----EGPSKAEITYHDNKDGTVAV 635
+ A + + T + G+S+ V +GP +E N DGT+ V
Sbjct: 593 RPKYQAALEKAQKESTATHKKGVGISIGVYGSGLDGPDASEAWAELNADGTITV 646
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,373,645
Number of Sequences: 62578
Number of extensions: 1460010
Number of successful extensions: 2998
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2425
Number of HSP's gapped (non-prelim): 416
length of query: 898
length of database: 14,973,337
effective HSP length: 108
effective length of query: 790
effective length of database: 8,214,913
effective search space: 6489781270
effective search space used: 6489781270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)