RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy192
(898 letters)
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A
{Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Length = 288
Score = 217 bits (552), Expect = 3e-64
Identities = 158/255 (61%), Positives = 193/255 (75%), Gaps = 2/255 (0%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
GYGGLSLSIEGPSK +I +D DG+ ++Y PTEPG YIIN+KFAD HV GSPF+ K+
Sbjct: 35 GYGGLSLSIEGPSKVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKV- 93
Query: 104 GEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEV 163
G R +E I R+R A V VGS C L+ K+P I+ D++A VTSP G T +AEI E
Sbjct: 94 -TGEGRVKESITRRRRAPSVANVGSHCDLSLKIPEISIQDMTAQVTSPSGKTHEAEIVEG 152
Query: 164 EDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQ 223
E+ Y + FVP E+G HTVSV+YK H+PGSPFQFTVGPL +GGAH+V AGGPGLER E
Sbjct: 153 ENHTYCIRFVPAEMGTHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEA 212
Query: 224 NQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFND 283
P EF++WTREAGAG LAI+VEGPSKAEI F+DRKDGSC V+YVV EPG+Y V +KFN+
Sbjct: 213 GVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNE 272
Query: 284 QHIPDSPYKLFVSPA 298
+HIPDSP+ + V+
Sbjct: 273 EHIPDSPFVVPVASP 287
Score = 204 bits (518), Expect = 2e-59
Identities = 105/283 (37%), Positives = 149/283 (52%), Gaps = 3/283 (1%)
Query: 206 GGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYV 265
G A RV G GL G +P EF + TR+AG G L++S+EGPSK +I+ +D +DG+C V
Sbjct: 4 GDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRV 63
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEIAQFPQGVVMADKPTQFLV 325
+Y EPG Y + IKF DQH+P SP+ + V+ + + V +
Sbjct: 64 TYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRRRRAPSVANVGSHCDLSL 123
Query: 326 RKNGAVGA-LDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGS 384
+ + A+V SPSG + I + Y IRF+P E G H + +K+ G H+PGS
Sbjct: 124 KIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHVPGS 183
Query: 385 PLRIKVGKGE-ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMD 443
P + VG V A G GL ++GV +F + T AGAG LA+ ++GPSK +
Sbjct: 184 PFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEIS 243
Query: 444 CTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTG 485
+ ++G V Y PGDY VS+K+N HI SPF V
Sbjct: 244 FEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVAS 286
Score = 169 bits (428), Expect = 3e-47
Identities = 108/339 (31%), Positives = 153/339 (45%), Gaps = 71/339 (20%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V G GL G + EP F I T+ AG GGLS+++EGPSK +I D
Sbjct: 9 VRVSGQGLHEGHTFEPAEFIIDTRDAG-------------YGGLSLSIEGPSKVDINTED 55
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVGSC------- 680
+DGT V+Y PT PG Y I +KF ++H+ GSP+ K+TGEGR + I+
Sbjct: 56 LEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRRRRAPSVANV 115
Query: 681 -SEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKK 739
S K+ + I+ + A + +PSG + + N I F P E+G+H VSVK
Sbjct: 116 GSHCDLSLKIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKY 175
Query: 740 MGVHIKNSPFKINVGEREVGDAKKVKVFGQSLTEGKTHEENPFTVDTRDAGSPLRIKVGK 799
G H+ SPF+ VG G A KV+ G L + F++ TR+
Sbjct: 176 KGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTRE----------- 224
Query: 800 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTR 859
AGAG LA+ ++GPSK EI
Sbjct: 225 --------------------------------AGAGGLAIAVEGPSKA-------EISFE 245
Query: 860 HTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ V Y+V++ G+Y + VK+ ++HIP SPF V V
Sbjct: 246 DRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 284
Score = 148 bits (373), Expect = 8e-40
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 36/296 (12%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG-YKV 453
D + V +G GL E + +FI+DT +AG G L+++I+GPSKV ++ ++E+G +V
Sbjct: 4 GDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRV 63
Query: 454 RYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK------------DLGERGGQETSSVTV 501
Y P PG+Y +++K+ H+ GSPF VK TG+ +++
Sbjct: 64 TYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRRRRAPSVANVGSHCDLSL 123
Query: 502 ETVQKVAKNKTQGPVIPIFKSDASKVTCKGMGLKKA--YAQKQNMFTIHCQD-----AGS 554
+ + ++ T P K+ +++ + T+ + GS
Sbjct: 124 KIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHVPGS 183
Query: 555 PFKLYVDSIPSGY---VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGL 611
PF+ V + G V A GPGL +G P F+I T+ AGAG L
Sbjct: 184 PFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGG-------------L 230
Query: 612 SMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITG 667
++AVEGPSKAEI++ D KDG+ V+Y+ PG+Y+++VKF E+HI SP++ +
Sbjct: 231 AIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVAS 286
Score = 98.9 bits (245), Expect = 6e-23
Identities = 58/285 (20%), Positives = 101/285 (35%), Gaps = 53/285 (18%)
Query: 522 SDASKVTCKGMGLKKAYAQKQNMFTIHCQDAGS-PFKLYVD--SIPSGYVTAYGPG--LI 576
DAS+V G GL + + + F I +DAG L ++ S G +
Sbjct: 4 GDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRV 63
Query: 577 SGVSGEPCLFTISTKGAG---AGSPFQFTVGPLRD------------------------- 608
+ EP + I+ K A GSPF V
Sbjct: 64 TYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRRRRAPSVANVGSHCDLSL 123
Query: 609 -------GGLSMAVEGP--SKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGS 659
++ V P E + ++ T + ++P G + ++VK+ +H+ GS
Sbjct: 124 KIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHVPGS 183
Query: 660 PYLAKITGEGRKRNQIS---------VGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEP 710
P+ + G + F ++ L +++ PS E
Sbjct: 184 PFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEIS 243
Query: 711 CFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGE 755
+K +G+ G+++ +E G + VSVK HI +SPF + V
Sbjct: 244 FEDRK--DGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVAS 286
Score = 81.1 bits (199), Expect = 8e-17
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 802 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHT 861
D + V +G GL E + +FI+DT +AG G L+++I+GPSKV +I T
Sbjct: 4 GDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKV-------DINTEDL 56
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y + G Y++ +K+ D H+PGSPF V+V
Sbjct: 57 EDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKV 93
Score = 73.1 bits (178), Expect = 4e-14
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 44/147 (29%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG----------------- 44
PSG + I + + T + + P E G H +++K+ G HV G
Sbjct: 140 PSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHK 199
Query: 45 ---------------------------YGGLSLSIEGPSKAEIQCKDNADGSLNISYRPT 77
GGL++++EGPSKAEI +D DGS ++Y
Sbjct: 200 VRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQ 259
Query: 78 EPGYYIINLKFADHHVEGSPFTAKIVG 104
EPG Y +++KF + H+ SPF +
Sbjct: 260 EPGDYEVSVKFNEEHIPDSPFVVPVAS 286
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A
{Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Length = 138
Score = 163 bits (415), Expect = 3e-47
Identities = 60/132 (45%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 358 YSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTD 417
+ M R +G H + GS + + DP V A G GL +GV ++
Sbjct: 8 TGGQQMGRGSGSHMASMTGGQQMGRGSRVGEQSQ--AGDPGLVSAYGPGLEGGTTGVSSE 65
Query: 418 FIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGYKVRYTPLVPGDYYVSLKYNG-YHIVG 476
FIV+T NAG+G L+VTIDGPSKV +DC E EG+ V YTP+ PG+Y +++KY G HIVG
Sbjct: 66 FIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGHVVTYTPMAPGNYLIAIKYGGPQHIVG 125
Query: 477 SPFKVKCTGKDL 488
SPFK K TG L
Sbjct: 126 SPFKAKVTGPRL 137
Score = 138 bits (348), Expect = 4e-38
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 165 DGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQN 224
+ + + G H S+ GS G V A GPGLE G
Sbjct: 5 ASMTGGQQMGRGSGSHMASMTGGQQMGRGSRVGEQSQA---GDPGLVSAYGPGLEGGTTG 61
Query: 225 QPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFND- 283
EF V T AG+G+L+++++GPSK ++D ++ +G V+Y PG Y + IK+
Sbjct: 62 VSSEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGHV-VTYTPMAPGNYLIAIKYGGP 120
Query: 284 QHIPDSPYKLFVSP 297
QHI SP+K V+
Sbjct: 121 QHIVGSPFKAKVTG 134
Score = 112 bits (281), Expect = 3e-29
Identities = 49/178 (27%), Positives = 63/178 (35%), Gaps = 55/178 (30%)
Query: 722 GISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLTEGKTHEENP 781
G R GSH+ S+ + S
Sbjct: 9 GGQQMGRGSGSHMASMTGGQQMGRGSRVGEQSQA-------------------------- 42
Query: 782 FTVDTRDAGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTI 841
DP V A G GL +GV ++FIV+T NAG+G L+VTI
Sbjct: 43 --------------------GDPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTI 82
Query: 842 DGPSKVSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDD-HIPGSPFKVEV 898
DGPSKV + V Y G YL+ +K+G HI GSPFK +V
Sbjct: 83 DGPSKVQLD--------CRECPEGHVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKV 132
Score = 99.6 bits (248), Expect = 1e-24
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLS 612
GS + G V+AYGPGL G +G F ++T AG G LS
Sbjct: 33 GSRVGEQSQAGDPGLVSAYGPGLEGGTTGVSSEFIVNTLNAG-------------SGALS 79
Query: 613 MAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKF-GEKHIKGSPYLAKITG 667
+ ++GPSK ++ + +G V+Y P APG Y IA+K+ G +HI GSP+ AK+TG
Sbjct: 80 VTIDGPSKVQLDCRECPEGH-VVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTG 134
Score = 82.2 bits (203), Expect = 1e-18
Identities = 29/128 (22%), Positives = 45/128 (35%), Gaps = 7/128 (5%)
Query: 265 VSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEIAQFPQGVVMADKPTQFL 324
+ G + + Q S GD + ++F+
Sbjct: 10 GQQMGRGSGSHMASMTGGQQMGRGSRVGEQSQA--GDPGLVSAYGPGLEGGTTGVSSEFI 67
Query: 325 VR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNG-VHIP 382
V N GAL + PS + DC P + + + + P G + I IK+ G HI
Sbjct: 68 VNTLNAGSGALSVTIDGPSKVQLDCRECP---EGHVVTYTPMAPGNYLIAIKYGGPQHIV 124
Query: 383 GSPLRIKV 390
GSP + KV
Sbjct: 125 GSPFKAKV 132
Score = 79.9 bits (197), Expect = 9e-18
Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 43/132 (32%)
Query: 15 HDGTVSLHYDPREEGLHELALKFNGDHVQG------------------------------ 44
R G H ++ +G
Sbjct: 4 MASMTGGQQMGRGSGSHMASMTGGQQMGRGSRVGEQSQAGDPGLVSAYGPGLEGGTTGVS 63
Query: 45 -----------YGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADH-H 92
G LS++I+GPSK ++ C++ +G ++Y P PG Y+I +K+ H
Sbjct: 64 SEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGH-VVTYTPMAPGNYLIAIKYGGPQH 122
Query: 93 VEGSPFTAKIVG 104
+ GSPF AK+ G
Sbjct: 123 IVGSPFKAKVTG 134
Score = 76.8 bits (189), Expect = 9e-17
Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 72 ISYRPTEPGYYIINLKFADHHVEGSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCK 131
G ++ ++ GS + + + G + +
Sbjct: 10 GQQMGRGSGSHMASMTGGQQMGRGSRVGEQSQAGDPG----LVSAYGPGLEGGTTGVSSE 65
Query: 132 LTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDI-H 190
+ LS T+ P V + E +G + V + P G + ++++Y H
Sbjct: 66 FIVNTLNAGSGALSVTIDGPSKV--QLDCRECPEG-HVVTYTPMAPGNYLIAIKYGGPQH 122
Query: 191 IPGSPFQFTV 200
I GSPF+ V
Sbjct: 123 IVGSPFKAKV 132
Score = 69.9 bits (171), Expect = 2e-14
Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 630 DGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYL--------AKITGEGRKRNQISVGSCS 681
+ G + ++ G++ +GS ++ G + G
Sbjct: 5 ASMTGGQQMGRGSGSHMASMTGGQQMGRGSRVGEQSQAGDPGLVSAYGPGLEGGTTG--V 62
Query: 682 EVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMG 741
F ++ +L+ +I PS ++ C ++ P G +++TP G++L+++K G
Sbjct: 63 SSEFIVNTLNAGSGALSVTIDGPSKVQLDC--RECPEG-HVVTYTPMAPGNYLIAIKYGG 119
Query: 742 -VHIKNSPFKINV 753
HI SPFK V
Sbjct: 120 PQHIVGSPFKAKV 132
Score = 32.5 bits (74), Expect = 0.22
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGD-HVQG 44
+ +G + Y P G + +A+K+ G H+ G
Sbjct: 92 CRECPEGH-VVTYTPMAPGNYLIAIKYGGPQHIVG 125
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation,
actin-binding, cytoplasm, cytoskeleton, disease
mutation, phosphoprotein; NMR {Homo sapiens}
Length = 191
Score = 148 bits (375), Expect = 3e-41
Identities = 67/173 (38%), Positives = 94/173 (54%)
Query: 126 VGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVR 185
VGS + + L+ATV P G E + + +G + FVPKE G H V V+
Sbjct: 15 VGSAADIPINISETDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVK 74
Query: 186 YKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISV 245
H+ SP + G A RV G GL G +P EF + TR+AG G L++S+
Sbjct: 75 KNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSI 134
Query: 246 EGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
EGPSK +I+ +D +DG+C V+Y EPG Y + IKF DQH+P SP+ + V+
Sbjct: 135 EGPSKVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGE 187
Score = 138 bits (348), Expect = 2e-37
Identities = 60/171 (35%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 319 KPTQFLVRKNGA-VGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFN 377
+ + + L A V+ PSG E+ C ++ + + I F+P+E G H +H+K N
Sbjct: 17 SAADIPINISETDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKN 76
Query: 378 GVHIPGSPLRIKVGKGE-ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDG 436
G H+ SP+ + + + E D + V +G GL E + +FI+DT +AG G L+++I+G
Sbjct: 77 GQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEG 136
Query: 437 PSKVSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
PSKV ++ ++E+G +V Y P PG+Y +++K+ H+ GSPF VK TG+
Sbjct: 137 PSKVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGE 187
Score = 134 bits (337), Expect = 4e-36
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 52/236 (22%)
Query: 663 AKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLG 722
+ + + + + VGS ++ P +S++D+ L A++ PSG EEPC LK++ NG++G
Sbjct: 1 GAMGDDSMRMSHLKVGSAAD--IPINISETDLSLLTATVVPPSGREEPCLLKRLRNGHVG 58
Query: 723 ISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLTEGKTHEENPF 782
ISF P+E G HLV VKK G H+ +SP + + + E+GDA +V+V GQ L EG T E F
Sbjct: 59 ISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEF 118
Query: 783 TVDTRDAGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTID 842
+DTRDAG G L+++I+
Sbjct: 119 IIDTRDAGY-------------------------------------------GGLSLSIE 135
Query: 843 GPSKVSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
GPSKV +I T V Y + G Y++ +K+ D H+PGSPF V+V
Sbjct: 136 GPSKV-------DINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKV 184
Score = 110 bits (275), Expect = 9e-28
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 211 VHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDF--KDRKDGSCYVSYV 268
+ + + + + E L +V PS E K ++G +S+V
Sbjct: 3 MGDDSMRMSHLKVGSAADIPINISETDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFV 62
Query: 269 VAEPGEYRVGIKFNDQHIPDSPYKLFVS-PAMGDAHKLEIAQFPQGVVMADKPTQFLVRK 327
E GE+ V +K N QH+ SP + +S +GDA ++ ++ +P +F++
Sbjct: 63 PKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDT 122
Query: 328 NGA-VGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPL 386
A G L + PS + + + ++ + + P E G + I+IKF H+PGSP
Sbjct: 123 RDAGYGGLSLSIEGPSKVDINT--EDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPF 180
Query: 387 RIKV 390
+KV
Sbjct: 181 SVKV 184
Score = 99.8 bits (248), Expect = 4e-24
Identities = 39/213 (18%), Positives = 78/213 (36%), Gaps = 35/213 (16%)
Query: 566 GYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITY 625
G + + G I+ L+ V PS E
Sbjct: 1 GAMGDDSMRMSHLKVGSAADIPINISETD-------------LSLLTATVVPPSGREEPC 47
Query: 626 H--DNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYL-----------AKITGEGRKR 672
++G V +S++P GE+ + VK +H+ SP +++ G+
Sbjct: 48 LLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGL 107
Query: 673 NQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGS 732
++ F D+ L+ SI+ PS ++ + + +G +++ P E G+
Sbjct: 108 HEGHTF--EPAEFIIDTRDAGYGGLSLSIEGPSKVDINT--EDLEDGTCRVTYCPTEPGN 163
Query: 733 HLVSVKKMGVHIKNSPFKINVGEREVGDAKKVK 765
+++++K H+ SPF + V +VK
Sbjct: 164 YIINIKFADQHVPGSPFSVK-----VTGEGRVK 191
Score = 99.4 bits (247), Expect = 6e-24
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 5/161 (3%)
Query: 44 GYGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
L+ ++ PS E C K +G + IS+ P E G +++++K HV SP
Sbjct: 29 DLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVV 88
Query: 102 IVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEIN 161
+ + +++ + + + LS ++ P V D
Sbjct: 89 -ISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKV--DINTE 145
Query: 162 EVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
++EDG V + P E G + +++++ D H+PGSPF V
Sbjct: 146 DLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTG 186
Score = 92.9 bits (230), Expect = 8e-22
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 44/149 (29%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQ------------------ 43
PSG + +++ +G V + + P+E G H + +K NG HV
Sbjct: 40 PSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASR 99
Query: 44 --------------------------GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPT 77
GYGGLSLSIEGPSK +I +D DG+ ++Y PT
Sbjct: 100 VRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRVTYCPT 159
Query: 78 EPGYYIINLKFADHHVEGSPFTAKIVGEG 106
EPG YIIN+KFAD HV GSPF+ K+ GEG
Sbjct: 160 EPGNYIINIKFADQHVPGSPFSVKVTGEG 188
Score = 89.8 bits (222), Expect = 1e-20
Identities = 57/278 (20%), Positives = 87/278 (31%), Gaps = 90/278 (32%)
Query: 398 AAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG---YKVR 454
A+ ++ +K G D ++ L T+ PS C +
Sbjct: 1 GAMGDDSMRMSHLKVGSAADIPINISETDLSLLTATVVPPSGREEPCLLKRLRNGHVGIS 60
Query: 455 YTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERGGQETSSVTVETVQKVAKNKTQG 514
+ P G++ V +K NG H+ SP V
Sbjct: 61 FVPKETGEHLVHVKKNGQHVASSPIPVV-------------------------------- 88
Query: 515 PVIPIFKSDASKVTCKGMGLKKAYAQKQNMFTIHCQDAGSPFKLYVDSIPSGYVTAYGPG 574
+ DAS+V G GL + + + F I +DAG + ++ GP
Sbjct: 89 -ISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGY------GGL---SLSIEGP- 137
Query: 575 LISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHDNKDGTVA 634
S L DG +TY
Sbjct: 138 ----------------------SKVDINTEDLEDG----------TCRVTYC-------- 157
Query: 635 VSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKR 672
PT PG Y I +KF ++H+ GSP+ K+TGEGR +
Sbjct: 158 ----PTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVK 191
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain,
structural protein; 2.80A {Dictyostelium discoideum}
SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Length = 311
Score = 150 bits (378), Expect = 3e-40
Identities = 63/318 (19%), Positives = 119/318 (37%), Gaps = 29/318 (9%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREA-------GAGSLAISVEGPSKAEIDFKDRKD 260
+ +A GPGL+ GE QP +F + + G +++EGP+ + D D
Sbjct: 5 PEKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPVDPVMVDNGD 64
Query: 261 GSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEIAQFPQGVVMADKP 320
G+ V + E G+Y + + + ++ P + V PA H + V + P
Sbjct: 65 GTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVFD-NAP 123
Query: 321 TQFLVRKNGAVG--------ALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNI 372
+F + G + + P G D + + Y + + G +N+
Sbjct: 124 AEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNV 183
Query: 373 HIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAV 432
++ G I P+ +K A + + + + + G V
Sbjct: 184 NVTLRGNPIKNMPIDVKC-----IEGANGEDSSFGSFTFTVAAKNKKGEVKTYGGDKFEV 238
Query: 433 TID-GPSKVSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGE 490
+I ++++D + ++G Y Y+ + G + +K NG HI GSPFK
Sbjct: 239 SITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGNP---- 294
Query: 491 RGGQETSSVTVETVQKVA 508
G++ V T + A
Sbjct: 295 --GKKNPEVKSFTTTRTA 310
Score = 134 bits (337), Expect = 7e-35
Identities = 56/268 (20%), Positives = 97/268 (36%), Gaps = 11/268 (4%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G G ++IEGP+ + DN DG+ ++ + P E G Y+INL +V G P T +
Sbjct: 41 GGDGFVVTIEGPAPVDPVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVK 100
Query: 104 GEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAF----DLSATVTSPGGVTEDAE 159
S V G+ + P G+ DA+
Sbjct: 101 PAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAK 160
Query: 160 INEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLE 219
+ + DG Y V + G + V+V + I P +G +
Sbjct: 161 VTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFT-- 218
Query: 220 RGEQNQPCEFNVWTREAGAGSLAISVEGPSKA-EIDFKDRKDGSCYVSYVVAEPGEYRVG 278
+ G +S+ GP++ +D D +DG+ +Y + G + G
Sbjct: 219 ----VAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTG 274
Query: 279 IKFNDQHIPDSPYKLFVSPAMGDAHKLE 306
+K N +HI SP+K + +++
Sbjct: 275 VKLNGKHIEGSPFKQVLGNPGKKNPEVK 302
Score = 121 bits (304), Expect = 2e-30
Identities = 63/347 (18%), Positives = 100/347 (28%), Gaps = 79/347 (22%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGG--LSMAVEGPSKAEITY 625
A GPGL G +P F I DGG + +EGP+ +
Sbjct: 8 SYAEGPGLDGGECFQPSKFKIHAVDPDGV--------HRTDGGDGFVVTIEGPAPVDPVM 59
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVGSCSEVSF 685
DN DGT V + P G+Y I + ++ G P + + + G F
Sbjct: 60 VDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVF 119
Query: 686 PGKVSDSDIRS--------------LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVG 731
++ I + +I P GL + +G G+ + G
Sbjct: 120 DNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEG 179
Query: 732 SHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLTEGKTHEENPFTVDTRDAGS 791
++ V+V G IKN P + E + + + T +
Sbjct: 180 NYNVNVTLRGNPIKNMPIDVKC--IEGANGEDSSFGSFTFTVAAKN-------------- 223
Query: 792 PLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKK 851
+ G V+I GP++
Sbjct: 224 ---------------------------------KKGEVKTYGGDKFEVSITGPAEEITLD 250
Query: 852 YKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
D + Y + G + VK HI GSPFK +
Sbjct: 251 AID------NQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVL 291
Score = 109 bits (272), Expect = 3e-26
Identities = 62/320 (19%), Positives = 102/320 (31%), Gaps = 42/320 (13%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDT-------CNAGAGTLAVTIDGPSKVSMDCTEV 447
ADP +A G GL + + F + G VTI+GP+ V +
Sbjct: 3 ADPEKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPVDPVMVDN 62
Query: 448 EEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPF-----------KVKCTGKDLGERGGQE 495
+G Y V + P GDY ++L +G ++ G P G+ L +
Sbjct: 63 GDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVFDNA 122
Query: 496 TSSVTVETVQKVAKNKTQGPVIPIFKSDASKVTCKGMGLKKAYAQKQNM------FTIHC 549
+ T+ V +T G D +V G A+ +
Sbjct: 123 PAEFTIFAVDTKGVARTDG-------GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDA 175
Query: 550 QDAGS---PFKLYVDSIP--SGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVG 604
G+ L + I V S FT+ A +
Sbjct: 176 PVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFTV-----AAKNKKGEVKT 230
Query: 605 PLRDGGLSMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAK 664
D + + DN+DGT +Y G + VK KHI+GSP+
Sbjct: 231 YGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQV 290
Query: 665 ITGEGRKRNQISVGSCSEVS 684
+ G+K ++ + + +
Sbjct: 291 LGNPGKKNPEVKSFTTTRTA 310
Score = 87.0 bits (214), Expect = 1e-18
Identities = 61/314 (19%), Positives = 94/314 (29%), Gaps = 28/314 (8%)
Query: 478 PFKVKCTGKDLGERGGQETSSVTVETVQKVAKNKTQG-PVIPIFKSDASKVTCKGMGLKK 536
P K G L + S + V ++T G + + V +
Sbjct: 5 PEKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPVDPVMVDNGD 64
Query: 537 A------YAQKQNMFTIHCQDAGSP------FKLYVDSIPSGYVTAYGPGLISGVSGEPC 584
++ + I+ G + + + A G GL+ P
Sbjct: 65 GTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVFDNAPA 124
Query: 585 LFTISTKGAGAGSPFQFTVGPLRDGG--LSMAVEGPSKAEITYH--DNKDGTVAVSYLPT 640
FTI DGG +A+ GP + DN DGT V Y
Sbjct: 125 EFTIFAVDTKGV--------ARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAP 176
Query: 641 APGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNAS 700
G Y + V IK P K + V+ K + +
Sbjct: 177 VEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFTVAAKNKKGEVKTYGGDKF 236
Query: 701 IQAPSGLEEPCFLKKIPNGN--LGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREV 758
+ +G E L I N + +++ G VK G HI+ SPFK +G
Sbjct: 237 EVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGN-PG 295
Query: 759 GDAKKVKVFGQSLT 772
+VK F + T
Sbjct: 296 KKNPEVKSFTTTRT 309
Score = 84.3 bits (207), Expect = 8e-18
Identities = 53/296 (17%), Positives = 92/296 (31%), Gaps = 36/296 (12%)
Query: 315 VMADKPTQFLV--------RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRE 366
+P++F + + + P+ + Y + F P+E
Sbjct: 18 GECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPVDPVM--VDNGDGTYDVEFEPKE 75
Query: 367 NGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDT---- 422
G + I++ +G ++ G P + K +A G GL ++ +F +
Sbjct: 76 AGDYVINLTLDGDNVNGFP-KTVTVKPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTK 134
Query: 423 ---CNAGAGTLAVTIDGPSKVSMDCTEVEEG---YKVRYTPLVPGDYYVSLKYNGYHIVG 476
G V I+GP + +D + Y V Y V G+Y V++ G I
Sbjct: 135 GVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKN 194
Query: 477 SPFKVKCTGKDLGERGGQETSSVTVETVQKVAKNKTQGPVIPIFKSDASKVTCK------ 530
P VKC GE + + TV K + KT G
Sbjct: 195 MPIDVKCIEGANGEDSSFGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDN 254
Query: 531 --GMGLKKAYAQKQNMFTIHCQDA-----GSPFKLYVD--SIPSGYVTAYGPGLIS 577
G F+ + GSPFK + + V ++ +
Sbjct: 255 QDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGNPGKKNPEVKSFTTTRTA 310
Score = 66.2 bits (160), Expect = 8e-12
Identities = 30/147 (20%), Positives = 48/147 (32%), Gaps = 39/147 (26%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG----------------- 44
P G V + DN+DGT + YD EG + + + G+ ++
Sbjct: 152 PDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSS 211
Query: 45 -------------------YGGLSLSI---EGPSKAEIQCKDNADGSLNISYRPTEPGYY 82
YGG + + + DN DG+ +Y G +
Sbjct: 212 FGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRF 271
Query: 83 IINLKFADHHVEGSPFTAKIVGEGSNR 109
+K H+EGSPF + G
Sbjct: 272 STGVKLNGKHIEGSPFKQVLGNPGKKN 298
Score = 55.8 bits (133), Expect = 2e-08
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Query: 802 ADPAAVHATGNGLAEIKSGVKTDFIVDT-------CNAGAGTLAVTIDGPSKVSVKKYKD 854
ADP +A G GL + + F + G VTI+GP+ V
Sbjct: 3 ADPEKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPV------- 55
Query: 855 EIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPF 894
+ G ++V++ ++ G+Y++ + D++ G P
Sbjct: 56 DPVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPK 95
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell
adhesion, cell junction, cell shape, cytoplasm,
cytoskeleton; NMR {Homo sapiens}
Length = 119
Score = 142 bits (359), Expect = 6e-40
Identities = 78/118 (66%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Query: 193 GSP--FQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSK 250
G P FQFTVGPL +GGAH+V AGG GLERG P EF++WTREAGAG L+I+VEGPSK
Sbjct: 1 GIPEFFQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSK 60
Query: 251 AEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEIA 308
AEI F+DRKDGSC VSYVV EPG+Y V IKFND+HIPDSP+ + V+ DA +L +
Sbjct: 61 AEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSDDARRLTVT 118
Score = 101 bits (253), Expect = 1e-25
Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 18/132 (13%)
Query: 553 GSPFKLYVDSIPSGY-----VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLR 607
G P P G V A G GL GV+G P F+I T+ A
Sbjct: 1 GIPEFFQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREA-------------G 47
Query: 608 DGGLSMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITG 667
GGLS+AVEGPSKAEI + D KDG+ VSY+ PG+Y++++KF ++HI SP++ +
Sbjct: 48 AGGLSIAVEGPSKAEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVAS 107
Query: 668 EGRKRNQISVGS 679
+++V S
Sbjct: 108 LSDDARRLTVTS 119
Score = 95.7 bits (238), Expect = 1e-23
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 383 GSPLRIKVG---KGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSK 439
G P + GE V A G GL +GV +F + T AGAG L++ ++GPSK
Sbjct: 1 GIPEFFQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSK 60
Query: 440 VSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTG 485
+ + ++G V Y PGDY VS+K+N HI SPF V
Sbjct: 61 AEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVAS 107
Score = 91.1 bits (226), Expect = 6e-22
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 790 GSPLRIKVG---KGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSK 846
G P + GE V A G GL +GV +F + T AGAG L++ ++GPSK
Sbjct: 1 GIPEFFQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSK 60
Query: 847 VSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
EI + V Y+V++ G+Y + +K+ D+HIP SPF V V
Sbjct: 61 A-------EIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPV 105
Score = 70.7 bits (173), Expect = 8e-15
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 46 GGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIVG 104
GGLS+++EGPSKAEI +D DGS +SY EPG Y +++KF D H+ SPF +
Sbjct: 49 GGLSIAVEGPSKAEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVAS 107
Score = 60.7 bits (147), Expect = 3e-11
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 125 EVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSV 184
G + + A LS V P + + +DG V +V +E G + VS+
Sbjct: 32 VAGVPAEFSIWTREAGAGGLSIAVEGPSKA--EIAFEDRKDGSCGVSYVVQEPGDYEVSI 89
Query: 185 RYKDIHIPGSPFQFTVGPLRD 205
++ D HIP SPF V L D
Sbjct: 90 KFNDEHIPDSPFVVPVASLSD 110
Score = 57.6 bits (139), Expect = 3e-10
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 664 KITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGI 723
+ G G +R F ++ L+ +++ PS E + +G+ G+
Sbjct: 22 RAGGTGLERGVA----GVPAEFSIWTREAGAGGLSIAVEGPSKAEIAF--EDRKDGSCGV 75
Query: 724 SFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKV 766
S+ +E G + VS+K HI +SPF + V DA+++ V
Sbjct: 76 SYVVQEPGDYEVSIKFNDEHIPDSPFVVPV-ASLSDDARRLTV 117
Score = 56.0 bits (135), Expect = 1e-09
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 317 ADKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDN--YSIRFMPRENGIHNIH 373
A P +F + + G L V PS E I D + + ++ +E G + +
Sbjct: 33 AGVPAEFSIWTREAGAGGLSIAVEGPSKAE----IAFEDRKDGSCGVSYVVQEPGDYEVS 88
Query: 374 IKFNGVHIPGSPLRIKVGKGEADPAAV 400
IKFN HIP SP + V D +
Sbjct: 89 IKFNDEHIPDSPFVVPVASLSDDARRL 115
Score = 43.7 bits (103), Expect = 2e-05
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PS + ED DG+ + Y +E G +E+++KFN +H+
Sbjct: 58 PSK--AEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPD 98
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 125
Score = 140 bits (353), Expect = 5e-39
Identities = 62/124 (50%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
Query: 380 HIPGSPLRIKVG--KGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGP 437
S +++VG +PA V A G GL +G++++F ++T AG GTL+VTI+GP
Sbjct: 2 SSGSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGP 61
Query: 438 SKVSMDCTEVEEGYKVRYTPLVPGDYYVSLKYNG-YHIVGSPFKVKCTGKDLGERGG-QE 495
SKV MDC E EGYKV YTP+ PG+Y +S+KY G HIVGSPFK K TG+ L G E
Sbjct: 62 SKVKMDCQETPEGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVTGQRLVSPGSANE 121
Query: 496 TSSV 499
TSS+
Sbjct: 122 TSSI 125
Score = 111 bits (280), Expect = 3e-29
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 190 HIPGSPFQFTVGPLRDGG-AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGP 248
S F+ VG G V A G GLE G EF + T AG G+L++++EGP
Sbjct: 2 SSGSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGP 61
Query: 249 SKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFND-QHIPDSPYKLFVSPA 298
SK ++D ++ +G V Y PG Y + +K+ HI SP+K V+
Sbjct: 62 SKVKMDCQETPEG-YKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVTGQ 111
Score = 101 bits (253), Expect = 1e-25
Identities = 51/138 (36%), Positives = 68/138 (49%), Gaps = 23/138 (16%)
Query: 552 AGSPFKLYVDSIPS----GYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLR 607
S FK+ V V+AYG GL G +G F I+T AG
Sbjct: 4 GSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAG------------- 50
Query: 608 DGGLSMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKF-GEKHIKGSPYLAKIT 666
G LS+ +EGPSK ++ + +G V Y P APG Y I+VK+ G HI GSP+ AK+T
Sbjct: 51 PGTLSVTIEGPSKVKMDCQETPEGY-KVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVT 109
Query: 667 GEGRKRNQISVGSCSEVS 684
G+ +S GS +E S
Sbjct: 110 GQRL----VSPGSANETS 123
Score = 100 bits (250), Expect = 3e-25
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 789 AGSPLRIKVG--KGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSK 846
S +++VG +PA V A G GL +G++++F ++T AG GTL+VTI+GPSK
Sbjct: 4 GSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGPSK 63
Query: 847 VSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGD-DHIPGSPFKVEV 898
V + + ++V Y G YL+ VK+G +HI GSPFK +V
Sbjct: 64 VKMDCQETP--------EGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKV 108
Score = 68.8 bits (168), Expect = 4e-14
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADH-HVEGSPFTAKI 102
G G LS++IEGPSK ++ C++ +G + Y P PG Y+I++K+ H+ GSPF AK+
Sbjct: 50 GPGTLSVTIEGPSKVKMDCQETPEGY-KVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKV 108
Query: 103 VGEG 106
G+
Sbjct: 109 TGQR 112
Score = 64.5 bits (157), Expect = 1e-12
Identities = 26/122 (21%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Query: 92 HVEGSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSP 151
S F ++ G + + G + LS T+ P
Sbjct: 2 SSGSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGP 61
Query: 152 GGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDI-HIPGSPFQFTVGPLRDGGAHR 210
V + E +G Y V + P G + +SV+Y HI GSPF+ V R
Sbjct: 62 SKV--KMDCQETPEG-YKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVTGQRLVSPGS 118
Query: 211 VH 212
+
Sbjct: 119 AN 120
Score = 63.0 bits (153), Expect = 5e-12
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Query: 285 HIPDSPYKLFVSPAMGDAHKLEIAQFPQGV--VMADKPTQFLVR-KNGAVGALDAKVISP 341
S +K+ V + ++ + G+ ++F + G L + P
Sbjct: 2 SSGSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGP 61
Query: 342 SGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGV-HIPGSPLRIKV-GKGEADPAA 399
S + DC + Y + + P G + I +K+ G HI GSP + KV G+ P +
Sbjct: 62 SKVKMDCQET---PEGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVTGQRLVSPGS 118
Query: 400 VHATG 404
+ T
Sbjct: 119 ANETS 123
Score = 44.9 bits (106), Expect = 9e-06
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 655 HIKGSPYLAKI--------------TGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNAS 700
S + ++ G G + + G + F + + +L+ +
Sbjct: 2 SSGSSGFKVRVGEPGQAGNPALVSAYGTGLEG--GTTGI--QSEFFINTTRAGPGTLSVT 57
Query: 701 IQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGV-HIKNSPFKINV-GEREV 758
I+ PS ++ C ++ P G + +TP G++L+SVK G HI SPFK V G+R V
Sbjct: 58 IEGPSKVKMDC--QETPEG-YKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVTGQRLV 114
Query: 759 G 759
Sbjct: 115 S 115
Score = 32.2 bits (73), Expect = 0.25
Identities = 8/35 (22%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNG-DHVQG 44
++ +G + Y P G + +++K+ G +H+ G
Sbjct: 68 CQETPEGY-KVMYTPMAPGNYLISVKYGGPNHIVG 101
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 105
Score = 134 bits (338), Expect = 3e-37
Identities = 68/110 (61%), Positives = 79/110 (71%), Gaps = 5/110 (4%)
Query: 193 GSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAE 252
GS G +GGAH+V AGGPGLERGE P EF++WTREAGAG L+I+VEGPSKAE
Sbjct: 1 GSS-----GSSGEGGAHKVRAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKAE 55
Query: 253 IDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDA 302
I F D K+GSC VSY+ EPG Y V IKFND+HIP+SPY + V DA
Sbjct: 56 ITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPVIAPSDDA 105
Score = 100 bits (250), Expect = 2e-25
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSM 442
GS GE V A G GL ++GV +F + T AGAG L++ ++GPSK +
Sbjct: 1 GSSGSS----GEGGAHKVRAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKAEI 56
Query: 443 DCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
+ + G V Y PG+Y VS+K+N HI SP+ V
Sbjct: 57 TFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPVIAP 101
Score = 99.4 bits (248), Expect = 5e-25
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 13/100 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL G +G P F+I T+ AGAG GLS+AVEGPSKAEIT+ D
Sbjct: 14 VRAGGPGLERGEAGVPAEFSIWTREAGAG-------------GLSIAVEGPSKAEITFDD 60
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITG 667
+K+G+ VSY+ PG Y++++KF ++HI SPYL +
Sbjct: 61 HKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPVIA 100
Score = 91.4 bits (227), Expect = 3e-22
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSV 849
GS GE V A G GL ++GV +F + T AGAG L++ ++GPSK
Sbjct: 1 GSSGSS----GEGGAHKVRAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKA-- 54
Query: 850 KKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
EI + V YI ++ G Y + +K+ D+HIP SP+ V V
Sbjct: 55 -----EITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPV 98
Score = 76.7 bits (189), Expect = 3e-17
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 46 GGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIVG 104
GGLS+++EGPSKAEI D+ +GS +SY EPG Y +++KF D H+ SP+ ++
Sbjct: 42 GGLSIAVEGPSKAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPVIA 100
Score = 61.3 bits (149), Expect = 1e-11
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 125 EVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSV 184
E G + + A LS V P + ++ ++G V ++ +E G + VS+
Sbjct: 25 EAGVPAEFSIWTREAGAGGLSIAVEGPSKA--EITFDDHKNGSCGVSYIAQEPGNYEVSI 82
Query: 185 RYKDIHIPGSPFQFTVGPLRD 205
++ D HIP SP+ V D
Sbjct: 83 KFNDEHIPESPYLVPVIAPSD 103
Score = 58.2 bits (141), Expect = 1e-10
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 296 SPAMGDAHKLEIAQFPQGVVMA--DKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQP 352
S G AHK+ G+ P +F + + G L V PS E I
Sbjct: 5 SSGEGGAHKVRA--GGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKAE----ITF 58
Query: 353 IDGDN--YSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKGEAD 396
D N + ++ +E G + + IKFN HIP SP + V D
Sbjct: 59 DDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPVIAPSDD 104
Score = 53.6 bits (129), Expect = 6e-09
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGER 756
L+ +++ PS E NG+ G+S+ +E G++ VS+K HI SP+ + V
Sbjct: 44 LSIAVEGPSKAEITF--DDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPVIA- 100
Query: 757 EVGDA 761
DA
Sbjct: 101 PSDDA 105
Score = 42.8 bits (101), Expect = 3e-05
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
+D+ +G+ + Y +E G +E+++KFN +H+
Sbjct: 58 FDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPE 91
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 131
Score = 133 bits (337), Expect = 8e-37
Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 178 GVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAG 237
+ V Y +PGSP+ D +V A GPGLE G +P EF + T+ AG
Sbjct: 3 SGSSGDVTYDGHPVPGSPYTVEASLPPD--PSKVKAHGPGLEGGLVGKPAEFTIDTKGAG 60
Query: 238 AGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSP 297
G L ++VEGP +A+I+ D DG+C VSY+ +PGEY V I F + HIP SP+K +
Sbjct: 61 TGGLGLTVEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEM 120
Query: 298 AMGDAHK 304
D
Sbjct: 121 PF-DPSS 126
Score = 117 bits (294), Expect = 5e-31
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 367 NGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAG 426
+ + + ++G +PGSP ++ DP+ V A G GL G +F +DT AG
Sbjct: 2 SSGSSGDVTYDGHPVPGSPYTVEA-SLPPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAG 60
Query: 427 AGTLAVTIDGPSKVSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTG 485
G L +T++GP + ++C++ +G V Y P PG+Y+V++ + HI GSPFK
Sbjct: 61 TGGLGLTVEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEM 120
Query: 486 K 486
Sbjct: 121 P 121
Score = 101 bits (254), Expect = 1e-25
Identities = 54/120 (45%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 552 AGSPFKLYVDSIP-SGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGG 610
GSP+ + P V A+GPGL G+ G+P FTI TKGAG GG
Sbjct: 17 PGSPYTVEASLPPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAG-------------TGG 63
Query: 611 LSMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGR 670
L + VEGP +A+I DN DGT +VSYLPT PGEY + + F E HI GSP+ A I
Sbjct: 64 LGLTVEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFD 123
Score = 90.3 bits (224), Expect = 1e-21
Identities = 37/168 (22%), Positives = 56/168 (33%), Gaps = 52/168 (30%)
Query: 731 GSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLTEGKTHEENPFTVDTRDAG 790
V G + SP+ + D KVK G L G + FT+DT+ AG
Sbjct: 3 SGSSGDVTYDGHPVPGSPYTVEASLPP--DPSKVKAHGPGLEGGLVGKPAEFTIDTKGAG 60
Query: 791 SPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVK 850
+ G L +T++GP +
Sbjct: 61 T-------------------------------------------GGLGLTVEGPCEA--- 74
Query: 851 KYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+I G V Y+ GEY + + + + HIPGSPFK ++
Sbjct: 75 ----KIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI 118
Score = 88.0 bits (218), Expect = 9e-21
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Query: 273 GEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEIAQFPQGVVMADKPTQFLVRKNGA-V 331
+ ++ +P SPY + S D K++ + KP +F + GA
Sbjct: 3 SGSSGDVTYDGHPVPGSPYTVEASLPP-DPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGT 61
Query: 332 GALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVG 391
G L V P + +C S+ ++P + G + ++I F VHIPGSP + +
Sbjct: 62 GGLGLTVEGPCEAKIEC--SDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI- 118
Query: 392 KGEADPAAVHATG 404
+ DP++ ++G
Sbjct: 119 EMPFDPSSGPSSG 131
Score = 74.9 bits (184), Expect = 3e-16
Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 19/139 (13%)
Query: 641 APGEYKIAVKFGEKHIKGSPYLA-----------KITGEGRKRNQISVGSCSEVSFPGKV 689
V + + GSPY K G G + + F
Sbjct: 1 GSSGSSGDVTYDGHPVPGSPYTVEASLPPDPSKVKAHGPGLEGGLV----GKPAEFTIDT 56
Query: 690 SDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPF 749
+ L +++ P + C +G +S+ P + G + V++ VHI SPF
Sbjct: 57 KGAGTGGLGLTVEGPCEAKIEC--SDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPF 114
Query: 750 KINVGEREVGDAKKVKVFG 768
K ++ D G
Sbjct: 115 KADIEMP--FDPSSGPSSG 131
Score = 73.4 bits (180), Expect = 1e-15
Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 80 GYYIINLKFADHHVEGSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGI 139
++ + H V GSP+T + K++ + VG + T G
Sbjct: 3 SGSSGDVTYDGHPVPGSPYTVEASLPPDPS---KVKAHGPGLEGGLVGKPAEFTIDTKGA 59
Query: 140 TAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFT 199
L TV P E ++ DG +V ++P + G + V++ ++++HIPGSPF+
Sbjct: 60 GTGGLGLTVEGPCEA--KIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKAD 117
Query: 200 VGPLRDGGAHRVHAGG 215
+ D + G
Sbjct: 118 IEMPFD--PSSGPSSG 131
Score = 72.6 bits (178), Expect = 2e-15
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGL L++EGP +A+I+C DN DG+ ++SY PT+PG Y +N+ F + H+ GSPF A I
Sbjct: 60 GTGGLGLTVEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIE 119
Query: 104 G 104
Sbjct: 120 M 120
Score = 38.7 bits (90), Expect = 0.002
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 8 KPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
K DN DGT S+ Y P + G + + + F H+ G
Sbjct: 75 KIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPG 111
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 116
Score = 132 bits (334), Expect = 1e-36
Identities = 57/111 (51%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
Query: 651 FGEKHIKGSPYLAKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEP 710
G I GSP+ AKIT + R+ +Q+ +GS ++ F +S++D+ SL ASI+APSG +EP
Sbjct: 3 SGSSGIPGSPFTAKITDDSRRCSQVKLGSAAD--FLLDISETDLSSLTASIKAPSGRDEP 60
Query: 711 CFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDA 761
C LK++PN ++GISF PREVG HLVS+KK G H+ NSP I V + E+GD+
Sbjct: 61 CLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDS 111
Score = 101 bits (252), Expect = 2e-25
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 88 FADHHVEGSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSAT 147
+ GSPFTAKI + + K +GS + L+A+
Sbjct: 3 SGSSGIPGSPFTAKITDDSRRCSQVK------------LGSAADFLLDISETDLSSLTAS 50
Query: 148 VTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGG 207
+ +P G E + + + + F+P+E+G H VS++ H+ SP V G
Sbjct: 51 IKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGD 110
Query: 208 A 208
+
Sbjct: 111 S 111
Score = 95.3 bits (237), Expect = 2e-23
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 14/120 (11%)
Query: 186 YKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISV 245
IPGSPF ++ + + +F + E SL S+
Sbjct: 3 SGSSGIPGSPFTA-----------KITDDSRRCSQVKLGSAADFLLDISETDLSSLTASI 51
Query: 246 EGPSKAEID--FKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA-MGDA 302
+ PS + K + +S++ E GE+ V IK N H+ +SP + V + +GD+
Sbjct: 52 KAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDS 111
Score = 91.4 bits (227), Expect = 4e-22
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 13/120 (10%)
Query: 376 FNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTID 435
IPGSP K+ +++K G DF++D +L +I
Sbjct: 3 SGSSGIPGSPFTAKI----------TDDSRRCSQVKLGSAADFLLDISETDLSSLTASIK 52
Query: 436 GPSKVSMDCTEVEEG---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERG 492
PS C + + P G++ VS+K NG H+ SP + ++G+ G
Sbjct: 53 APSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDSG 112
Score = 91.4 bits (227), Expect = 4e-22
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 281 FNDQHIPDSPYKLFVSPAMGDAHKLEIAQFPQGVVMADKPTQFLVRKNGA-VGALDAKVI 339
IP SP+ ++ D+ + + FL+ + + +L A +
Sbjct: 3 SGSSGIPGSPFTAKIT---DDSRRCSQVK-------LGSAADFLLDISETDLSSLTASIK 52
Query: 340 SPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGK---GEAD 396
+PSG ++ C ++ + ++ I F+PRE G H + IK NG H+ SP+ I V + G++
Sbjct: 53 APSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDSG 112
Query: 397 PAA 399
P++
Sbjct: 113 PSS 115
Score = 79.5 bits (196), Expect = 7e-18
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 804 PAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGR 863
A + +++K G DF++D +L +I PS +
Sbjct: 14 TAKITDDSRRCSQVKLGSAADFLLDISETDLSSLTASIKAPSGRDE-----PCLLKRLPN 68
Query: 864 NNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
N+ + +I R+ GE+L+ +K +H+ SP + V
Sbjct: 69 NHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMV 103
Score = 73.7 bits (181), Expect = 6e-16
Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 23/116 (19%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLS 612
GSPF + T G F + S L+
Sbjct: 10 GSPFTAKI--------TDDSRRCSQVKLGSAADFLLDISETDLSS-------------LT 48
Query: 613 MAVEGPSKAEI--TYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT 666
+++ PS + + + +S++P GE+ +++K H+ SP +
Sbjct: 49 ASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVV 104
Score = 63.3 bits (154), Expect = 3e-12
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 44 GYGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
L+ SI+ PS + C K + + IS+ P E G +++++K +HV SP +
Sbjct: 43 DLSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIM 102
Query: 102 IV 103
+V
Sbjct: 103 VV 104
Score = 45.9 bits (109), Expect = 4e-06
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PSG + +++ + + + + PRE G H +++K NG+HV
Sbjct: 54 PSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVAN 96
Score = 29.8 bits (67), Expect = 1.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 884 WGDDHIPGSPFKVEV 898
G IPGSPF ++
Sbjct: 3 SGSSGIPGSPFTAKI 17
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex,
phosphoprotein, disease mutation, immunoglobulin like,
zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB:
2brq_A* 2jf1_A 3isw_A
Length = 94
Score = 129 bits (325), Expect = 1e-35
Identities = 64/93 (68%), Positives = 77/93 (82%)
Query: 206 GGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYV 265
GGAH+V AGGPGLER E P EF++WTREAGAG LAI+VEGPSKAEI F+DRKDGSC V
Sbjct: 1 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGV 60
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
+YVV EPG+Y V +KFN++HIPDSP+ + V+
Sbjct: 61 AYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASP 93
Score = 102 bits (256), Expect = 2e-26
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 13/100 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL +G P F+I T+ AGAG GL++AVEGPSKAEI++ D
Sbjct: 6 VRAGGPGLERAEAGVPAEFSIWTREAGAG-------------GLAIAVEGPSKAEISFED 52
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITG 667
KDG+ V+Y+ PG+Y+++VKF E+HI SP++ +
Sbjct: 53 RKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVAS 92
Score = 100 bits (252), Expect = 8e-26
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG-YKV 453
V A G GL ++GV +F + T AGAG LA+ ++GPSK + + ++G V
Sbjct: 1 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGV 60
Query: 454 RYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
Y PGDY VS+K+N HI SPF V
Sbjct: 61 AYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASP 93
Score = 92.8 bits (231), Expect = 6e-23
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 802 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHT 861
V A G GL ++GV +F + T AGAG LA+ ++GPSK EI
Sbjct: 1 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKA-------EISFEDR 53
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ V Y+V++ G+Y + VK+ ++HIP SPF V V
Sbjct: 54 KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 90
Score = 75.9 bits (187), Expect = 5e-17
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGL++++EGPSKAEI +D DGS ++Y EPG Y +++KF + H+ SPF +
Sbjct: 32 GAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 91
Query: 104 G 104
Sbjct: 92 S 92
Score = 59.3 bits (144), Expect = 4e-11
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
L+ V P + + +DG V +V +E G + VSV++ + HIP SPF V
Sbjct: 35 GLAIAVEGPSKA--EISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVAS 92
Score = 57.8 bits (140), Expect = 1e-10
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 300 GDAHKLEIA--QFPQGVVMADKPTQFLVRKNGA-VGALDAKVISPSGTEDDCFIQPIDGD 356
G AHK+ + P +F + A G L V PS E I D
Sbjct: 1 GGAHKVRAGGPGLERAEA--GVPAEFSIWTREAGAGGLAIAVEGPSKAE----ISFEDRK 54
Query: 357 N--YSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
+ + ++ +E G + + +KFN HIP SP + V
Sbjct: 55 DGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 90
Score = 53.9 bits (130), Expect = 3e-09
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 690 SDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPF 749
++ L +++ PS E + +G+ G+++ +E G + VSVK HI +SPF
Sbjct: 29 REAGAGGLAIAVEGPSKAEISF--EDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPF 86
Query: 750 KINV 753
+ V
Sbjct: 87 VVPV 90
Score = 43.2 bits (102), Expect = 2e-05
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PS + ED DG+ + Y +E G +E+++KFN +H+
Sbjct: 43 PSK--AEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPD 83
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction
with GP1BA, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 115
Score = 127 bits (321), Expect = 9e-35
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 190 HIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPS 249
P SP QF V + V A GPGL G N+ F + T +AG G L +++EGPS
Sbjct: 6 SGPESPLQFYVNY---PNSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPS 62
Query: 250 KAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
KAEI D KDG+C V+Y+ PG+Y + +K+ND+HIP SP+ ++
Sbjct: 63 KAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITDD 111
Score = 122 bits (309), Expect = 4e-33
Identities = 61/120 (50%), Positives = 79/120 (65%), Gaps = 13/120 (10%)
Query: 552 AGSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGL 611
SP + YV+ SG V+AYGPGL+ GV+ + FTI T+ AG +GGL
Sbjct: 8 PESPLQFYVNYPNSGSVSAYGPGLVYGVANKTATFTIVTEDAG-------------EGGL 54
Query: 612 SMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRK 671
+A+EGPSKAEI+ DNKDGT V+YLPT PG+Y I VK+ +KHI GSP+ AKIT + R+
Sbjct: 55 DLAIEGPSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITDDSRR 114
Score = 115 bits (289), Expect = 2e-30
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 377 NGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDG 436
+G P SPL+ V + +V A G GL + F + T +AG G L + I+G
Sbjct: 3 SGSSGPESPLQFYVN--YPNSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEG 60
Query: 437 PSKVSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
PSK + C + ++G V Y P +PGDY + +KYN HI GSPF K T
Sbjct: 61 PSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITDD 111
Score = 98.0 bits (244), Expect = 2e-24
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 789 AGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVS 848
SPL+ V + +V A G GL + F + T +AG G L + I+GPSK
Sbjct: 8 PESPLQFYVN--YPNSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKA- 64
Query: 849 VKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
EI V Y+ G+Y ++VK+ D HIPGSPF ++
Sbjct: 65 ------EISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI 108
Score = 75.6 bits (186), Expect = 1e-16
Identities = 37/63 (58%), Positives = 45/63 (71%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGL L+IEGPSKAEI C DN DG+ ++Y PT PG Y I +K+ D H+ GSPFTAKI
Sbjct: 50 GEGGLDLAIEGPSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKIT 109
Query: 104 GEG 106
+
Sbjct: 110 DDS 112
Score = 72.5 bits (178), Expect = 1e-15
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 282 NDQHIPDSPYKLFVSPAMGDAHKLEI--AQFPQGVVMADKPTQFLVR-KNGAVGALDAKV 338
+ P+SP + +V+ ++ + GV +K F + ++ G LD +
Sbjct: 3 SGSSGPESPLQFYVNYP--NSGSVSAYGPGLVYGVA--NKTATFTIVTEDAGEGGLDLAI 58
Query: 339 ISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
PS E C ++ ++P G ++I +K+N HIPGSP K+
Sbjct: 59 EGPSKAEISC--IDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI 108
Score = 62.1 bits (151), Expect = 7e-12
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 6/114 (5%)
Query: 89 ADHHVEGSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATV 148
+ SP V + + + T T L +
Sbjct: 3 SGSSGPESPLQFY-VNYPN---SGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAI 58
Query: 149 TSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
P + + +DG V ++P G +++ V+Y D HIPGSPF +
Sbjct: 59 EGPSKA--EISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITD 110
Score = 57.1 bits (138), Expect = 4e-10
Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 12/111 (10%)
Query: 655 HIKGSPYL--------AKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSG 706
SP ++ G +F D+ L+ +I+ PS
Sbjct: 6 SGPESPLQFYVNYPNSGSVSAYGPGLVYGVANK--TATFTIVTEDAGEGGLDLAIEGPSK 63
Query: 707 LEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGERE 757
E C +G +++ P G + + VK HI SPF + +
Sbjct: 64 AEISC--IDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITDDS 112
Score = 37.1 bits (86), Expect = 0.003
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
DN DGT ++ Y P G + + +K+N H+ G
Sbjct: 68 CIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPG 101
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation,
actin-binding, cytoplasm, cytoskeleton, disease
mutation, phosphoprotein; NMR {Homo sapiens}
Length = 188
Score = 129 bits (325), Expect = 1e-34
Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 4/174 (2%)
Query: 125 EVGSTCKLTFKMP-GITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVS 183
+V S +P I +++ V P G I + +DG V + P E G+H +
Sbjct: 16 DVTSLRPFDLVIPFTIKKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMD 75
Query: 184 VRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAI 243
+RY ++HIPGSP QF V + V A GPGL G N+P F V T++AG G L++
Sbjct: 76 IRYDNMHIPGSPLQFYVDYVNC---GHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSL 132
Query: 244 SVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSP 297
++EGPSKAEI D +DG+C VSY+ PG+Y + +K+N+QH+P SP+ V+
Sbjct: 133 AIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTG 186
Score = 117 bits (294), Expect = 2e-30
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Query: 315 VMADKPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHI 374
V + +P ++ G + +V PSG I ++R+ P E G+H + I
Sbjct: 17 VTSLRPFDLVIPFTIKKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDI 76
Query: 375 KFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTI 434
+++ +HIPGSPL+ + V A G GL F V+T +AG G L++ I
Sbjct: 77 RYDNMHIPGSPLQFY--VDYVNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAI 134
Query: 435 DGPSKVSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKD 487
+GPSK + CT+ ++G V Y P++PGDY + +KYN H+ GSPF + TG D
Sbjct: 135 EGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTGDD 188
Score = 92.2 bits (228), Expect = 1e-21
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 9/184 (4%)
Query: 210 RVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPS--KAEIDFKDRKDGSCYVSY 267
R G GL+ +P + + G + V PS A+ D KDG+ V Y
Sbjct: 7 RPLVGVNGLDVT-SLRPFDLVI-PFTIKKGEITGEVRMPSGKVAQPTITDNKDGTVTVRY 64
Query: 268 VVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEIAQFPQGVVMADKPTQFLVR- 326
+E G + + I++++ HIP SP + +V GVV KP F V
Sbjct: 65 APSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHVTAYGPGLTHGVVN--KPATFTVNT 122
Query: 327 KNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPL 386
K+ G L + PS E C S+ ++P G ++I +K+N H+PGSP
Sbjct: 123 KDAGEGGLSLAIEGPSKAEISCTDN--QDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPF 180
Query: 387 RIKV 390
+V
Sbjct: 181 TARV 184
Score = 88.0 bits (217), Expect = 5e-20
Identities = 58/146 (39%), Positives = 77/146 (52%), Gaps = 41/146 (28%)
Query: 1 MPSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQ----------------- 43
MPSG V +P I DN DGTV++ Y P E GLHE+ ++++ H+
Sbjct: 42 MPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHVT 101
Query: 44 ------------------------GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEP 79
G GGLSL+IEGPSKAEI C DN DG+ ++SY P P
Sbjct: 102 AYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLPVLP 161
Query: 80 GYYIINLKFADHHVEGSPFTAKIVGE 105
G Y I +K+ + HV GSPFTA++ G+
Sbjct: 162 GDYSILVKYNEQHVPGSPFTARVTGD 187
Score = 84.5 bits (208), Expect = 8e-19
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 11/185 (5%)
Query: 578 GVSGEPCLFTISTKGAGAGSPFQFTV-GPLRDGGLSMAVEGPS--KAEITYHDNKDGTVA 634
++ E L ++ + PF + ++ G ++ V PS A+ T DNKDGTV
Sbjct: 2 AMAPERPLVGVNGLDVTSLRPFDLVIPFTIKKGEITGEVRMPSGKVAQPTITDNKDGTVT 61
Query: 635 VSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVGSCS------EVSFPGK 688
V Y P+ G +++ +++ HI GSP + + +F
Sbjct: 62 VRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHVTAYGPGLTHGVVNKPATFTVN 121
Query: 689 VSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSP 748
D+ L+ +I+ PS E C + +G +S+ P G + + VK H+ SP
Sbjct: 122 TKDAGEGGLSLAIEGPSKAEISCTDNQ--DGTCSVSYLPVLPGDYSILVKYNEQHVPGSP 179
Query: 749 FKINV 753
F V
Sbjct: 180 FTARV 184
Score = 83.4 bits (205), Expect = 2e-18
Identities = 50/242 (20%), Positives = 79/242 (32%), Gaps = 59/242 (24%)
Query: 657 KGSPYLAKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKI 716
+P + G + V S + + ++ PSG +
Sbjct: 2 AMAPERPLVGVNG-----LDVTSLRPFDLVIPFTIKK-GEITGEVRMPSGKVAQPTITDN 55
Query: 717 PNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLTEGKT 776
+G + + + P E G H + ++ +HI SP + V G
Sbjct: 56 KDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGH---------------- 99
Query: 777 HEENPFTVDTRDAGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGT 836
V A G GL F V+T +AG G
Sbjct: 100 ------------------------------VTAYGPGLTHGVVNKPATFTVNTKDAGEGG 129
Query: 837 LAVTIDGPSKVSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKV 896
L++ I+GPSK EI V Y+ G+Y ++VK+ + H+PGSPF
Sbjct: 130 LSLAIEGPSKA-------EISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTA 182
Query: 897 EV 898
V
Sbjct: 183 RV 184
Score = 83.0 bits (204), Expect = 2e-18
Identities = 61/119 (51%), Positives = 81/119 (68%), Gaps = 13/119 (10%)
Query: 550 QDAGSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDG 609
GSP + YVD + G+VTAYGPGL GV +P FT++TK AG +G
Sbjct: 82 HIPGSPLQFYVDYVNCGHVTAYGPGLTHGVVNKPATFTVNTKDAG-------------EG 128
Query: 610 GLSMAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGE 668
GLS+A+EGPSKAEI+ DN+DGT +VSYLP PG+Y I VK+ E+H+ GSP+ A++TG+
Sbjct: 129 GLSLAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTGD 187
Score = 77.2 bits (189), Expect = 3e-16
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 8/161 (4%)
Query: 44 GYGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G ++ + PS Q DN DG++ + Y P+E G + +++++ + H+ GSP
Sbjct: 32 KKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFY 91
Query: 102 IVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEIN 161
+ V T G LS + P N
Sbjct: 92 VDYVNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEG----GLSLAIEGPSKAEISCTDN 147
Query: 162 EVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
+DG +V ++P G +++ V+Y + H+PGSPF V
Sbjct: 148 --QDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTG 186
Score = 64.5 bits (156), Expect = 5e-12
Identities = 43/224 (19%), Positives = 68/224 (30%), Gaps = 49/224 (21%)
Query: 393 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG-- 450
G P NGL ++ S D ++ G + + PS T +
Sbjct: 1 GAMAPERPLVGVNGL-DVTSLRPFDLVI-PFTIKKGEITGEVRMPSGKVAQPTITDNKDG 58
Query: 451 -YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERGGQETSSVTVETVQKVAK 509
VRY P G + + ++Y+ HI GSP + + G
Sbjct: 59 TVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHV------------------ 100
Query: 510 NKTQGPVIPIFKSDASKVTCKGMGLKKAYAQKQNMFTIHCQDAGS-PFKLYVDSIPSGYV 568
T G GL K FT++ +DAG L ++ +
Sbjct: 101 ------------------TAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEI 142
Query: 569 TAYGPG----LISGVSGEPCLFTISTKGAG---AGSPFQFTVGP 605
+ +S + P ++I K GSPF V
Sbjct: 143 SCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTG 186
Score = 51.0 bits (121), Expect = 3e-07
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 800 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTR 859
G P NGL ++ S D ++ G + + PS +
Sbjct: 1 GAMAPERPLVGVNGL-DVTSLRPFDLVI-PFTIKKGEITGEVRMPSGKVA-----QPTIT 53
Query: 860 HTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKV 896
V+Y + G + + +++ + HIPGSP +
Sbjct: 54 DNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQF 90
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Length = 102
Score = 118 bits (297), Expect = 9e-32
Identities = 48/100 (48%), Positives = 61/100 (61%)
Query: 113 KIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHF 172
A V VGS C L K+P I + D+SA VTSP G +AEI + + V F
Sbjct: 2 SSGSSGRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRF 61
Query: 173 VPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVH 212
VP+E+GVHTVSV+Y+ H+ GSPFQFTVGPL +GG+
Sbjct: 62 VPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGSGPSS 101
Score = 82.1 bits (203), Expect = 4e-19
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 663 AKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLG 722
GR + +VGS K+ + + ++A + +PSG + + +
Sbjct: 1 GSSGSSGRAPSVATVGS--ICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHC 58
Query: 723 ISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDA 761
+ F P+E+G H VSVK G H+ SPF+ VG G +
Sbjct: 59 VRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGS 97
Score = 78.3 bits (193), Expect = 9e-18
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 210 RVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPS--KAEIDFKDRKDGSCYVSY 267
+ G C+ N+ E + ++ V PS E + S V +
Sbjct: 2 SSGSSGRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRF 61
Query: 268 VVAEPGEYRVGIKFNDQHIPDSPYKLFVSP 297
V E G + V +K+ QH+ SP++ V P
Sbjct: 62 VPQEMGVHTVSVKYRGQHVTGSPFQFTVGP 91
Score = 78.3 bits (193), Expect = 1e-17
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 398 AAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG---YKVR 454
+ ++G + G D + + ++ + PS + V G + VR
Sbjct: 1 GSSGSSGRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVR 60
Query: 455 YTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
+ P G + VS+KY G H+ GSPF+
Sbjct: 61 FVPQEMGVHTVSVKYRGQHVTGSPFQFT 88
Score = 77.9 bits (192), Expect = 1e-17
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 314 VVMADKPTQFLVRKNGA-VGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNI 372
V ++ + A V SPSG + I P+ +++ +RF+P+E G+H +
Sbjct: 12 VATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTV 71
Query: 373 HIKFNGVHIPGSPLRIKVG---KGEADPAA 399
+K+ G H+ GSP + VG +G + P++
Sbjct: 72 SVKYRGQHVTGSPFQFTVGPLGEGGSGPSS 101
Score = 71.7 bits (176), Expect = 2e-15
Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 805 AAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRN 864
+ ++G + G D + + ++ + PS E G+N
Sbjct: 1 GSSGSSGRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVT-----EAEIVPMGKN 55
Query: 865 NFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ V+++ ++ G + + VK+ H+ GSPF+ V
Sbjct: 56 SHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTV 89
Score = 70.2 bits (172), Expect = 7e-15
Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 15/115 (13%)
Query: 566 GYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPS--KAEI 623
G + G G C + + +S V PS E
Sbjct: 1 GSSGSSGRAPSVATVGSICDLNLKIPEINSSD-------------MSAHVTSPSGRVTEA 47
Query: 624 TYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVG 678
+ V ++P G + ++VK+ +H+ GSP+ + G + S G
Sbjct: 48 EIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGSGPSSG 102
Score = 55.2 bits (133), Expect = 1e-09
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 44 GYGGLSLSIEGPS--KAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
+S + PS E + S + + P E G + +++K+ HV GSPF
Sbjct: 29 NSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFT 88
Query: 102 IV 103
+
Sbjct: 89 VG 90
Score = 48.6 bits (116), Expect = 3e-07
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PSG V + I + + + P+E G+H +++K+ G HV G
Sbjct: 40 PSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTG 82
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 111
Score = 118 bits (296), Expect = 2e-31
Identities = 68/126 (53%), Positives = 81/126 (64%), Gaps = 15/126 (11%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLS 612
GS +I S +V+AYGPGL G+ +P FTI TK AG +GGLS
Sbjct: 1 GSSG--SSGAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAG-------------EGGLS 45
Query: 613 MAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKR 672
+AVEGPSKAEIT DNKDGT VSYLPTAPG+Y I V+F +KHI GSP+ AKITG+ R
Sbjct: 46 LAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKITGDDSMR 105
Query: 673 NQISVG 678
+ S G
Sbjct: 106 SGPSSG 111
Score = 114 bits (286), Expect = 4e-30
Identities = 44/100 (44%), Positives = 64/100 (64%)
Query: 199 TVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDR 258
+ G + V A GPGL G N+P F + T++AG G L+++VEGPSKAEI KD
Sbjct: 2 SSGSSGAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDN 61
Query: 259 KDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
KDG+C VSY+ PG+Y + ++F+D+HIP SP+ ++
Sbjct: 62 KDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKITGD 101
Score = 98.7 bits (246), Expect = 1e-24
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSM 442
GS G + V A G GL+ F + T +AG G L++ ++GPSK +
Sbjct: 1 GSSGSS----GAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEI 56
Query: 443 DCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERG 492
C + ++G V Y P PGDY + ++++ HI GSPF K TG D G
Sbjct: 57 TCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKITGDDSMRSG 107
Score = 89.9 bits (223), Expect = 1e-21
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSV 849
GS G + V A G GL+ F + T +AG G L++ ++GPSK
Sbjct: 1 GSSGSS----GAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKA-- 54
Query: 850 KKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
EI + V Y+ G+Y +IV++ D HIPGSPF ++
Sbjct: 55 -----EITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 98
Score = 77.9 bits (192), Expect = 2e-17
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGLSL++EGPSKAEI CKDN DG+ +SY PT PG Y I ++F D H+ GSPFTAKI
Sbjct: 40 GEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKIT 99
Query: 104 GEGSNR 109
G+ S R
Sbjct: 100 GDDSMR 105
Score = 58.3 bits (141), Expect = 1e-10
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 315 VMADKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDN--YSIRFMPRENGIHN 371
M +KP F + K+ G L V PS E I D + ++ ++P G ++
Sbjct: 24 GMVNKPATFTIVTKDAGEGGLSLAVEGPSKAE----ITCKDNKDGTCTVSYLPTAPGDYS 79
Query: 372 IHIKFNGVHIPGSPLRIKV 390
I ++F+ HIPGSP K+
Sbjct: 80 IIVRFDDKHIPGSPFTAKI 98
Score = 57.9 bits (140), Expect = 2e-10
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 126 VGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVR 185
V T LS V P + + +DG V ++P G +++ VR
Sbjct: 26 VNKPATFTIVTKDAGEGGLSLAVEGPSKA--EITCKDNKDGTCTVSYLPTAPGDYSIIVR 83
Query: 186 YKDIHIPGSPFQFTVGP 202
+ D HIPGSPF +
Sbjct: 84 FDDKHIPGSPFTAKITG 100
Score = 52.9 bits (127), Expect = 1e-08
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 690 SDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPF 749
D+ L+ +++ PS E C K +G +S+ P G + + V+ HI SPF
Sbjct: 37 KDAGEGGLSLAVEGPSKAEITC--KDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPF 94
Query: 750 KINV 753
+
Sbjct: 95 TAKI 98
Score = 40.2 bits (94), Expect = 3e-04
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
+DN DGT ++ Y P G + + ++F+ H+ G
Sbjct: 58 CKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPG 91
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 111
Score = 116 bits (293), Expect = 4e-31
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 193 GSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAE 252
GS +G A R G GL G + +F V TR+AG G ++++VEGPSK +
Sbjct: 1 GSSGSSGIGD-----ARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVD 55
Query: 253 IDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
I +D +DG+C VSY PG Y V KF D+H+P SP+ + +S
Sbjct: 56 IQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGE 101
Score = 112 bits (282), Expect = 2e-29
Identities = 49/126 (38%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLS 612
GS + + YG GL G + E F + T+ AG GG+S
Sbjct: 1 GSSGSSGI--GDARRAKVYGRGLSEGRTFEMSDFIVDTRDAG-------------YGGIS 45
Query: 613 MAVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKR 672
+AVEGPSK +I D +DGT VSY PT PG Y ++ KF ++H+ GSP+ KI+GEGR +
Sbjct: 46 LAVEGPSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGEGRVK 105
Query: 673 NQISVG 678
+ S G
Sbjct: 106 SGPSSG 111
Score = 104 bits (262), Expect = 6e-27
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSM 442
GS +G D G GL+E ++ +DFIVDT +AG G +++ ++GPSKV +
Sbjct: 1 GSSGSSGIG----DARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDI 56
Query: 443 DCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERG 492
++E+G KV Y P VPG Y VS K+ H+ GSPF VK +G+ + G
Sbjct: 57 QTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGEGRVKSG 107
Score = 92.9 bits (231), Expect = 1e-22
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSV 849
GS +G D G GL+E ++ +DFIVDT +AG G +++ ++GPSKV
Sbjct: 1 GSSGSSGIG----DARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKV-- 54
Query: 850 KKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+I T +V Y G Y++ K+ D+H+PGSPF V++
Sbjct: 55 -----DIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKI 98
Score = 87.5 bits (217), Expect = 7e-21
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
GYGG+SL++EGPSK +IQ +D DG+ +SY PT PG YI++ KFAD HV GSPFT KI
Sbjct: 40 GYGGISLAVEGPSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKIS 99
Query: 104 GEGSNRQ 110
GEG +
Sbjct: 100 GEGRVKS 106
Score = 63.6 bits (155), Expect = 2e-12
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 13/120 (10%)
Query: 95 GSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGV 154
GS ++ I + + + +S V P V
Sbjct: 1 GSSGSSGIGDA------RRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKV 54
Query: 155 TEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVHAG 214
D + ++EDG V + P GV+ VS ++ D H+PGSPF + RV +G
Sbjct: 55 --DIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISG-----EGRVKSG 107
Score = 59.8 bits (145), Expect = 4e-11
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 319 KPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDN--YSIRFMPRENGIHNIHIK 375
+ + F+V ++ G + V PS + IQ D ++ + + P G++ + K
Sbjct: 28 EMSDFIVDTRDAGYGGISLAVEGPSKVD----IQTEDLEDGTCKVSYFPTVPGVYIVSTK 83
Query: 376 FNGVHIPGSPLRIKVGKGEADPAAVHATG 404
F H+PGSP +K+ GE + ++G
Sbjct: 84 FADEHVPGSPFTVKI-SGEGRVKSGPSSG 111
Score = 54.0 bits (130), Expect = 5e-09
Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 16/119 (13%)
Query: 658 GSPYLA--------KITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEE 709
GS + K+ G G + F D+ ++ +++ PS ++
Sbjct: 1 GSSGSSGIGDARRAKVYGRGLSEGRT----FEMSDFIVDTRDAGYGGISLAVEGPSKVDI 56
Query: 710 PCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFG 768
+ + +G +S+ P G ++VS K H+ SPF + + G K G
Sbjct: 57 QT--EDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGE--GRVKSGPSSG 111
Score = 42.1 bits (99), Expect = 6e-05
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 11 IEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
ED DGT + Y P G++ ++ KF +HV G
Sbjct: 58 TEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPG 91
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 105
Score = 114 bits (286), Expect = 3e-30
Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 193 GSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAE 252
GS RV A GPGL+ N+P F V TR AG G L I+VEGPS+++
Sbjct: 1 GSSG-----SSGGCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPSESK 55
Query: 253 IDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
I+ +D KDGSC Y+ PG+Y V I + HIP SP+++ V
Sbjct: 56 INCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPVKDV 101
Score = 100 bits (252), Expect = 1e-25
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V A GPGL + +P +FT+ T+GAG GGL + VEGPS+++I D
Sbjct: 14 VQAQGPGLKEAFTNKPNVFTVVTRGAG-------------IGGLGITVEGPSESKINCRD 60
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT 666
NKDG+ + Y+P APG+Y + + +G HI GSP+ +
Sbjct: 61 NKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPVK 99
Score = 96.8 bits (241), Expect = 4e-24
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSM 442
GS G P+ V A G GL E + F V T AG G L +T++GPS+ +
Sbjct: 1 GSSGS----SGGCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPSESKI 56
Query: 443 DCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
+C + ++G Y P PGDY V++ Y G HI GSPF+V
Sbjct: 57 NCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVP 97
Score = 86.7 bits (215), Expect = 1e-20
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSV 849
GS G P+ V A G GL E + F V T AG G L +T++GPS+ +
Sbjct: 1 GSSGS----SGGCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPSESKI 56
Query: 850 KKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
R + +YI G+Y + + +G HIPGSPF+V V
Sbjct: 57 N-------CRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPV 98
Score = 77.1 bits (190), Expect = 3e-17
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGL +++EGPS+++I C+DN DGS + Y P PG Y +N+ + H+ GSPF +
Sbjct: 40 GIGGLGITVEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPVK 99
Score = 62.5 bits (152), Expect = 4e-12
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 126 VGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVR 185
T G L TV P + +DG + ++P G + V++
Sbjct: 26 TNKPNVFTVVTRGAGIGGLGITVEGPSES--KINCRDNKDGSCSAEYIPFAPGDYDVNIT 83
Query: 186 YKDIHIPGSPFQFTVGPLRD 205
Y HIPGSPF+ V + D
Sbjct: 84 YGGAHIPGSPFRVPVKDVVD 103
Score = 60.2 bits (146), Expect = 2e-11
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 316 MADKPTQFLVRKNGA-VGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHI 374
+KP F V GA +G L V PS ++ +C + + S ++P G ++++I
Sbjct: 25 FTNKPNVFTVVTRGAGIGGLGITVEGPSESKINC--RDNKDGSCSAEYIPFAPGDYDVNI 82
Query: 375 KFNGVHIPGSPLRIKVGKGEADP 397
+ G HIPGSP R+ V K DP
Sbjct: 83 TYGGAHIPGSPFRVPV-KDVVDP 104
Score = 54.4 bits (131), Expect = 3e-09
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 14/104 (13%)
Query: 658 GSPYLA--------KITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEE 709
GS + + G G K F + I L +++ PS +
Sbjct: 1 GSSGSSGGCQPSRVQAQGPGLKEAFT----NKPNVFTVVTRGAGIGGLGITVEGPSESKI 56
Query: 710 PCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
C + +G+ + P G + V++ G HI SPF++ V
Sbjct: 57 NC--RDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPV 98
Score = 43.2 bits (102), Expect = 2e-05
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PS K DN DG+ S Y P G +++ + + G H+ G
Sbjct: 51 PSE--SKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPG 91
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation,
immun like, cytoskeleton, actin-binding, cell junction,
shape; HET: CME; 2.44A {Homo sapiens}
Length = 100
Score = 114 bits (286), Expect = 3e-30
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 201 GPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPS--KAEIDFKDR 258
G + A +V GPGLER + +F V AG+ L I + + AE+ +D
Sbjct: 1 GAMDPFDASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDH 60
Query: 259 KDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
DG+ ++Y+ PG Y V IK+ Q +P+ P KL V PA
Sbjct: 61 GDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQVEPA 100
Score = 87.4 bits (217), Expect = 5e-21
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
V GPGL +GE F + AG+ + T+ + E AE+ D
Sbjct: 11 VKCSGPGLERATAGEVGQFQVDCSSAGSA---ELTI--------EICSEAGLPAEVYIQD 59
Query: 628 NKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
+ DGT ++Y+P PG Y + +K+G + + P ++
Sbjct: 60 HGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQV 97
Score = 85.5 bits (212), Expect = 3e-20
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 393 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPS--KVSMDCTEVEEG 450
D + V +G GL +G F VD +AG+ L + I + + + +G
Sbjct: 4 DPFDASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDHGDG 63
Query: 451 -YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
+ + Y PL PG Y V++KY G + P K++
Sbjct: 64 THTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ 96
Score = 83.6 bits (207), Expect = 1e-19
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 800 GEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTR 859
D + V +G GL +G F VD +AG+ L + I + + E++ +
Sbjct: 4 DPFDASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLPA-----EVYIQ 58
Query: 860 HTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
G + YI G Y + +K+G +P P K++V
Sbjct: 59 DHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQV 97
Score = 67.0 bits (164), Expect = 8e-14
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
+L+ + S G+ + I + DG + + ++P G +TV+++Y +P P + V P
Sbjct: 40 ELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQVEP 99
Score = 63.9 bits (156), Expect = 9e-13
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 44 GYGGLSLSIEGPS--KAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G L++ I + AE+ +D+ DG+ I+Y P PG Y + +K+ V P +
Sbjct: 37 GSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ 96
Query: 102 I 102
+
Sbjct: 97 V 97
Score = 62.8 bits (153), Expect = 2e-12
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 315 VMADKPTQFLV--RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNI 372
A + QF V G+ L ++ S +G + +IQ ++I ++P G + +
Sbjct: 21 ATAGEVGQFQVDCSSAGS-AELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTV 79
Query: 373 HIKFNGVHIPGSPLRIKV 390
IK+ G +P P +++V
Sbjct: 80 TIKYGGQPVPNFPSKLQV 97
Score = 56.6 bits (137), Expect = 4e-10
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
L I + +GL +++ +G I++ P G++ V++K G + N P K+ V
Sbjct: 41 LTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQV 97
Score = 47.8 bits (114), Expect = 6e-07
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
+G + I+D+ DGT ++ Y P G + + +K+ G V
Sbjct: 48 EAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPN 90
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding
protein, cytoskeleton, complex; 2.32A {Homo sapiens}
SCOP: b.1.18.10 PDB: 2aav_A
Length = 97
Score = 113 bits (284), Expect = 4e-30
Identities = 42/90 (46%), Positives = 60/90 (66%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSY 267
V A GPGL G N+P F V T++AG G L++++EGPSKAEI D +DG+C VSY
Sbjct: 6 CGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVSY 65
Query: 268 VVAEPGEYRVGIKFNDQHIPDSPYKLFVSP 297
+ PG+Y + +K+N+QH+P SP+ V+
Sbjct: 66 LPVLPGDYSILVKYNEQHVPGSPFTARVTG 95
Score = 112 bits (282), Expect = 9e-30
Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 13/104 (12%)
Query: 565 SGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEIT 624
G+VTAYGPGL GV +P FT++TK AG +GGLS+A+EGPSKAEI+
Sbjct: 6 CGHVTAYGPGLTHGVVNKPATFTVNTKDAG-------------EGGLSLAIEGPSKAEIS 52
Query: 625 YHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGE 668
DN+DGT +VSYLP PG+Y I VK+ E+H+ GSP+ A++TG+
Sbjct: 53 CTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVTGD 96
Score = 103 bits (259), Expect = 1e-26
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG-YKV 453
+ V A G GL F V+T +AG G L++ I+GPSK + CT+ ++G V
Sbjct: 4 VNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSV 63
Query: 454 RYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKD 487
Y P++PGDY + +KYN H+ GSPF + TG D
Sbjct: 64 SYLPVLPGDYSILVKYNEQHVPGSPFTARVTGDD 97
Score = 89.7 bits (223), Expect = 8e-22
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 802 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHT 861
+ V A G GL F V+T +AG G L++ I+GPSK EI
Sbjct: 4 VNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKA-------EISCTDN 56
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+ G+Y ++VK+ + H+PGSPF V
Sbjct: 57 QDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARV 93
Score = 82.4 bits (204), Expect = 3e-19
Identities = 37/62 (59%), Positives = 47/62 (75%)
Query: 44 GYGGLSLSIEGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKIV 103
G GGLSL+IEGPSKAEI C DN DG+ ++SY P PG Y I +K+ + HV GSPFTA++
Sbjct: 35 GEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVT 94
Query: 104 GE 105
G+
Sbjct: 95 GD 96
Score = 61.6 bits (150), Expect = 7e-12
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 126 VGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVR 185
V T LS + P + + +DG +V ++P G +++ V+
Sbjct: 21 VNKPATFTVNTKDAGEGGLSLAIEGPSKA--EISCTDNQDGTCSVSYLPVLPGDYSILVK 78
Query: 186 YKDIHIPGSPFQFTVGP 202
Y + H+PGSPF V
Sbjct: 79 YNEQHVPGSPFTARVTG 95
Score = 60.1 bits (146), Expect = 2e-11
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 317 ADKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDN--YSIRFMPRENGIHNIH 373
+KP F V K+ G L + PS E I D + S+ ++P G ++I
Sbjct: 21 VNKPATFTVNTKDAGEGGLSLAIEGPSKAE----ISCTDNQDGTCSVSYLPVLPGDYSIL 76
Query: 374 IKFNGVHIPGSPLRIKV 390
+K+N H+PGSP +V
Sbjct: 77 VKYNEQHVPGSPFTARV 93
Score = 55.8 bits (135), Expect = 7e-10
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 690 SDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPF 749
D+ L+ +I+ PS E C +G +S+ P G + + VK H+ SPF
Sbjct: 32 KDAGEGGLSLAIEGPSKAEISC--TDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPF 89
Query: 750 KINVGERE 757
V +
Sbjct: 90 TARVTGDD 97
Score = 43.5 bits (103), Expect = 1e-05
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PS + DN DGT S+ Y P G + + +K+N HV G
Sbjct: 46 PSK--AEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPG 86
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10 PDB: 2eeb_A
Length = 112
Score = 109 bits (274), Expect = 1e-28
Identities = 43/109 (39%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Query: 296 SPAMGDAHKLEIAQFPQGVVMADKPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDG 355
S DA +L + + + ++P F V+ NGA G +DA+V +PSG ++C++ +D
Sbjct: 5 SSGSDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDARVHTPSGAVEECYVSELDS 64
Query: 356 DNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATG 404
D ++IRF+P ENG+H+I +KFNG HIPGSP +I+VG+ ++ + ++G
Sbjct: 65 DKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGE-QSQAGSGPSSG 112
Score = 87.9 bits (218), Expect = 7e-21
Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 8/108 (7%)
Query: 193 GSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKA- 251
GS A R+ + NQP F V A G + V PS A
Sbjct: 1 GSSGSSGSDD-----ARRLTVTSLQETGLKVNQPASFAVQLNGAR-GVIDARVHTPSGAV 54
Query: 252 -EIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
E + + ++ E G + + +KFN HIP SP+K+ V
Sbjct: 55 EECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQ 102
Score = 82.9 bits (205), Expect = 3e-19
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 95 GSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGV 154
GS ++ ++ +V ++ G + A V +P G
Sbjct: 1 GSSGSSGSDDAR------RLTVTSLQETGLKVNQPASFAVQLNGARG-VIDARVHTPSGA 53
Query: 155 TEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVH 212
E+ ++E++ + + F+P E GVH++ V++ HIPGSPF+ VG G+
Sbjct: 54 VEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGSGPSS 111
Score = 79.9 bits (197), Expect = 3e-18
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSM 442
GS D + T +K F V N G + + PS
Sbjct: 1 GSSGSSGSD----DARRLTVTSLQETGLKVNQPASFAVQ-LNGARGVIDARVHTPSGAVE 55
Query: 443 DC--TEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
+C +E++ + +R+ P G + + +K+NG HI GSPFK++
Sbjct: 56 ECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIR 98
Score = 79.9 bits (197), Expect = 4e-18
Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 18/120 (15%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLS 612
GS D + +T +P F + GA G +
Sbjct: 1 GSSGSSGSD--DARRLTVTSLQETGLKVNQPASFAVQLNGA--------------RGVID 44
Query: 613 MAVEGPSKAEITYH--DNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGR 670
V PS A + + + ++P G + I VKF HI GSP+ ++ + +
Sbjct: 45 ARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQ 104
Score = 77.5 bits (191), Expect = 3e-17
Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 10/109 (9%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSV 849
GS D + T +K F V N G + + PS
Sbjct: 1 GSSGSSGSD----DARRLTVTSLQETGLKVNQPASFAVQ-LNGARGVIDARVHTPSGAVE 55
Query: 850 KKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
E + + +++I + G + + VK+ HIPGSPFK+ V
Sbjct: 56 -----ECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRV 99
Score = 71.4 bits (175), Expect = 4e-15
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 658 GSPYLAKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIP 717
GS ++T + + V SF +++ + ++A + PSG E C++ ++
Sbjct: 7 GSDDARRLTVTSLQETGLKVNQ--PASFAVQLNGAR-GVIDARVHTPSGAVEECYVSELD 63
Query: 718 NGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDA 761
+ I F P E G H + VK G HI SPFKI VGE+ +
Sbjct: 64 SDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGS 107
Score = 59.4 bits (144), Expect = 5e-11
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 44 GYGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G + + PS A +C + I + P E G + I++KF H+ GSPF +
Sbjct: 39 ARGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIR 98
Query: 102 IVGEGSN 108
+ +
Sbjct: 99 VGEQSQA 105
Score = 49.0 bits (117), Expect = 2e-07
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PSG V++ + + ++ + P E G+H + +KFNG H+ G
Sbjct: 50 PSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPG 92
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 119
Score = 108 bits (272), Expect = 3e-28
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 190 HIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGE--QNQPCEFNVWTREAGAGSLAISVEG 247
SPF+ V P D A +V A GPGL + P +F + R+AG G LA+ +
Sbjct: 5 SSGRSPFKVKVLPTYD--ASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITD 62
Query: 248 PS--KAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDA 302
D KDG+ V+Y+ + G Y +G+ + IP SPY++ + GDA
Sbjct: 63 QEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRATQT-GDA 118
Score = 93.0 bits (231), Expect = 1e-22
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 378 GVHIPGSPLRIKVGKGEADPAAVHATGNGL--AEIKSGVKTDFIVDTCNAGAGTLAVTID 435
SP ++KV D + V A+G GL + + + DF +D +AG G LAV I
Sbjct: 3 SGSSGRSPFKVKVLPT-YDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQIT 61
Query: 436 GPSKVSMDCTEVEEG---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
+ Y V Y P G Y + + Y G I SP++++ T
Sbjct: 62 DQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRATQT 115
Score = 86.5 bits (214), Expect = 2e-20
Identities = 41/123 (33%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 552 AGSPFKLYVDSIPS-GYVTAYGPGLISG--VSGEPCLFTISTKGAGAGSPFQFTVGPLRD 608
SPFK+ V VTA GPGL S + P F I + A +
Sbjct: 7 GRSPFKVKVLPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDA-------------GE 53
Query: 609 GGLSMAVEGPS--KAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT 666
G L++ + HDNKDGT AV+Y+P G Y I V +G I SPY + T
Sbjct: 54 GLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRAT 113
Query: 667 GEG 669
G
Sbjct: 114 QTG 116
Score = 83.4 bits (206), Expect = 2e-19
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 789 AGSPLRIKVGKGEADPAAVHATGNGL--AEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSK 846
SP ++KV D + V A+G GL + + + DF +D +AG G LAV I
Sbjct: 7 GRSPFKVKVLPT-YDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITDQEG 65
Query: 847 VSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ V YI G Y++ V +G D IP SP+++
Sbjct: 66 KPK-----RAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRA 112
Score = 78.0 bits (192), Expect = 2e-17
Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 283 DQHIPDSPYKLFVSPAMGDAHKLEIA--QFPQGVVMADKPTQFLVRKNGAVGA-LDAKVI 339
SP+K+ V P DA K+ + V A P F + A L ++
Sbjct: 3 SGSSGRSPFKVKVLPT-YDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQIT 61
Query: 340 SPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKV 390
G + Y++ ++P + G + I + + G IP SP RI+
Sbjct: 62 DQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRA 112
Score = 74.1 bits (182), Expect = 4e-16
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 1/117 (0%)
Query: 89 ADHHVEGSPFTAKIVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATV 148
+ SPF K V + + + L+ +
Sbjct: 2 SSGSSGRSPFKVK-VLPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQI 60
Query: 149 TSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRD 205
T G + A +++ +DG YAV ++P + G + + V Y IP SP++ D
Sbjct: 61 TDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRATQTGD 117
Score = 65.7 bits (160), Expect = 4e-13
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 15/119 (12%)
Query: 654 KHIKGSPYLAKI-----------TGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQ 702
SP+ K+ +G G + V F D+ L I
Sbjct: 4 GSSGRSPFKVKVLPTYDASKVTASGPGLSSYGVPASL--PVDFAIDARDAGEGLLAVQIT 61
Query: 703 APSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDA 761
G + + +G +++ P + G +++ V G I SP++I + GDA
Sbjct: 62 DQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRA--TQTGDA 118
Score = 60.7 bits (147), Expect = 2e-11
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 45 YGGLSLSIEGPS--KAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAKI 102
G L++ I DN DG+ ++Y P + G Y+I + + + SP+ +
Sbjct: 53 EGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRA 112
Query: 103 VGEG 106
G
Sbjct: 113 TQTG 116
Score = 46.8 bits (111), Expect = 2e-06
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
G + ++ DN DGT ++ Y P + G + + + + GD +
Sbjct: 63 QEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPL 105
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 113
Score = 107 bits (270), Expect = 6e-28
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 193 GSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGP--SK 250
GS + GP +V A GPGLE G+ + +V EAG G+L + +K
Sbjct: 1 GSSG--SSGPF---DPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTK 55
Query: 251 AEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHK 304
AE+ ++ KDG+ V+YV G Y + +K+ + +P P ++ V PA D
Sbjct: 56 AEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKVEPA-VDTSS 108
Score = 90.2 bits (224), Expect = 9e-22
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSM 442
GS G DP+ V A+G GL K G VD AG G L + S
Sbjct: 1 GSS----GSSGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKA 56
Query: 443 DCTEVEEG---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
+ + Y V Y PL G Y +++KY G + P +VK
Sbjct: 57 EVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKVEPA 103
Score = 90.2 bits (224), Expect = 1e-21
Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 17/120 (14%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLS 612
GS V A GPGL G GE L ++ AG G L
Sbjct: 1 GSSGSSGP--FDPSKVVASGPGLEHGKVGEAGLLSVDCSEAG-------------PGALG 45
Query: 613 MAVEGPSKAEITY--HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGR 670
+ S + +NKDGT AV+Y+P G Y + +K+G + + P K+
Sbjct: 46 LEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKVEPAVD 105
Score = 86.4 bits (214), Expect = 2e-20
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSV 849
GS G DP+ V A+G GL K G VD AG G L + S
Sbjct: 1 GSS----GSSGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKA 56
Query: 850 KKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
E+ ++ + V Y+ G Y L +K+G + +P P +V+V
Sbjct: 57 -----EVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV 100
Score = 67.1 bits (164), Expect = 1e-13
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
L S G + I +DG YAV +VP G++T++++Y +P P + V P
Sbjct: 43 ALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKVEP 102
Query: 203 LRDGGAHRVHAGG 215
D + G
Sbjct: 103 AVD--TSSGPSSG 113
Score = 65.9 bits (161), Expect = 3e-13
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 316 MADKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHI 374
+ V GAL + +S SGT+ + IQ Y++ ++P G++ + +
Sbjct: 25 KVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTM 84
Query: 375 KFNGVHIPGSPLRIKVGKGEADPAAVHATG 404
K+ G +P P R+KV + D ++ ++G
Sbjct: 85 KYGGELVPHFPARVKV-EPAVDTSSGPSSG 113
Score = 64.0 bits (156), Expect = 1e-12
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 43 QGYGGLSLSIEGP--SKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTA 100
G G L L +KAE+ ++N DG+ ++Y P G Y + +K+ V P
Sbjct: 39 AGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARV 98
Query: 101 KIVGEG 106
K+
Sbjct: 99 KVEPAV 104
Score = 62.9 bits (153), Expect = 3e-12
Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGER 756
L + SG + ++ +G +++ P G + +++K G + + P ++ V
Sbjct: 44 LGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV--E 101
Query: 757 EVGDAKKVKVFG 768
D G
Sbjct: 102 PAVDTSSGPSSG 113
Score = 45.5 bits (108), Expect = 4e-06
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
SG + I++N DGT ++ Y P G++ L +K+ G+ V
Sbjct: 51 DSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPH 93
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin,
ABP- 120; 2.20A {Dictyostelium discoideum} SCOP:
b.1.18.10 b.1.18.10
Length = 212
Score = 110 bits (276), Expect = 1e-27
Identities = 41/202 (20%), Positives = 64/202 (31%), Gaps = 14/202 (6%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREA-------GAGSLAISVEGPSKAEIDF--KDR 258
A +A G GL + N P EF ++ + G +++ GP +D D
Sbjct: 6 AEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDN 65
Query: 259 KDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHKLEIAQFPQGVVMAD 318
DG+ V Y G Y V + I + P + + F V +
Sbjct: 66 NDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIE-GANGEDSSFGSFTFTVAAKN 124
Query: 319 KPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNG 378
K + I+ E Y+ + NG + +K NG
Sbjct: 125 KKGEVKTYGGDKFE----VSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 180
Query: 379 VHIPGSPLRIKVGKGEADPAAV 400
HI GSP + +G V
Sbjct: 181 KHIEGSPFKQVLGNPGKKNPEV 202
Score = 97.2 bits (241), Expect = 5e-23
Identities = 50/211 (23%), Positives = 69/211 (32%), Gaps = 15/211 (7%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGG--LSMAVEGPSKAEITY 625
A G GL+ P FTI DGG +A+ GP +
Sbjct: 9 SYAEGEGLVKVFDNAPAEFTIFAVDT--------KGVARTDGGDPFEVAINGPDGLVVDA 60
Query: 626 H--DNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKRNQISVGSCSEV 683
DN DGT V Y G Y + V IK P K + V
Sbjct: 61 KVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFTV 120
Query: 684 SFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLG--ISFTPREVGSHLVSVKKMG 741
+ K + + + +G E L I N + +++ G VK G
Sbjct: 121 AAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 180
Query: 742 VHIKNSPFKINVGEREVGDAKKVKVFGQSLT 772
HI+ SPFK +G +VK F + T
Sbjct: 181 KHIEGSPFKQVLGN-PGKKNPEVKSFTTTRT 210
Score = 92.6 bits (229), Expect = 2e-21
Identities = 37/204 (18%), Positives = 74/204 (36%), Gaps = 21/204 (10%)
Query: 315 VMADKPTQFLV--------RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRE 366
V + P +F + + + + P G D + + Y + +
Sbjct: 19 VFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPV 78
Query: 367 NGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAG 426
G +N+++ G I P+ +K +G + + + + + G
Sbjct: 79 EGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFT-----FTVAAKNKKGEVKTYG 133
Query: 427 AGTLAVTIDGPS-KVSMDCTE-VEEGYKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCT 484
V+I GP+ ++++D + + Y Y+ + G + +K NG HI GSPFK
Sbjct: 134 GDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLG 193
Query: 485 GKDLGERGGQETSSVTVETVQKVA 508
G++ V T + A
Sbjct: 194 NP------GKKNPEVKSFTTTRTA 211
Score = 91.8 bits (227), Expect = 4e-21
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 7/156 (4%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
+ P G+ DA++ + DG Y V + G + V+V + I P
Sbjct: 45 PFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIE 104
Query: 203 LRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKA-EIDFKDRKDG 261
+G + + G +S+ GP++ +D D +DG
Sbjct: 105 GANGEDSSFGSFTF------TVAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDG 158
Query: 262 SCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSP 297
+ +Y + G + G+K N +HI SP+K +
Sbjct: 159 TYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGN 194
Score = 77.6 bits (190), Expect = 3e-16
Identities = 39/209 (18%), Positives = 67/209 (32%), Gaps = 47/209 (22%)
Query: 522 SDASKVTCKGMGLKKAYAQKQNMFTIHCQDA--------GSPFKLYVDSIPSGYV----- 568
A +G GL K + FTI D G PF++ ++ P G V
Sbjct: 4 PSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAING-PDGLVVDAKV 62
Query: 569 ------------TAYGPG------LISGVSGEPCLFTISTKGAGAGSP------------ 598
A G + G + + G
Sbjct: 63 TDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFTVAA 122
Query: 599 --FQFTVGPLRDGGLSMAVEGPSKA-EITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKH 655
+ V +++ GP++ + DN+DGT +Y G + VK KH
Sbjct: 123 KNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKH 182
Query: 656 IKGSPYLAKITGEGRKRNQISVGSCSEVS 684
I+GSP+ + G+K ++ + + +
Sbjct: 183 IEGSPFKQVLGNPGKKNPEVKSFTTTRTA 211
Score = 76.0 bits (186), Expect = 1e-15
Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 10/161 (6%)
Query: 44 GYGGLSLSIEGPSKAEIQC--KDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G ++I GP + DN DG+ + Y G Y +N+ + ++ P K
Sbjct: 42 GGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVK 101
Query: 102 IVGEGSNRQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEIN 161
+ + + G ++ + + +
Sbjct: 102 CIEGANGEDSSFGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAEEI--------TLDAI 153
Query: 162 EVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
+ +DG Y + G + V+ HI GSPF+ +G
Sbjct: 154 DNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGN 194
Score = 74.1 bits (181), Expect = 4e-15
Identities = 43/211 (20%), Positives = 68/211 (32%), Gaps = 25/211 (11%)
Query: 392 KGEADPAAVHATGNGLAEIKSGVKTDFIVDT-------CNAGAGTLAVTIDGPSKVSMDC 444
K +A G GL ++ +F + G V I+GP + +D
Sbjct: 1 KPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDA 60
Query: 445 TEVEEG---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERGGQETSSVTV 501
+ Y V Y V G+Y V++ G I P VKC GE + + TV
Sbjct: 61 KVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFTV 120
Query: 502 ETVQKVAKNKTQG-------PVIPIFKSDASKVTCKGMGLKKAY-AQKQNMFTIHCQD-- 551
K + KT G P + + + AY F+ +
Sbjct: 121 AAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 180
Query: 552 ---AGSPFKLYV--DSIPSGYVTAYGPGLIS 577
GSPFK + + V ++ +
Sbjct: 181 KHIEGSPFKQVLGNPGKKNPEVKSFTTTRTA 211
Score = 71.0 bits (173), Expect = 5e-14
Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 39/153 (25%)
Query: 1 MPSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQ----------------- 43
P G V + DN+DGT + YD EG + + + G+ ++
Sbjct: 52 GPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDS 111
Query: 44 ---------------------GYGGLSLSIEGPSKA-EIQCKDNADGSLNISYRPTEPGY 81
G +SI GP++ + DN DG+ +Y G
Sbjct: 112 SFGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGR 171
Query: 82 YIINLKFADHHVEGSPFTAKIVGEGSNRQREKI 114
+ +K H+EGSPF + G K
Sbjct: 172 FSTGVKLNGKHIEGSPFKQVLGNPGKKNPEVKS 204
Score = 66.0 bits (160), Expect = 2e-12
Identities = 39/247 (15%), Positives = 67/247 (27%), Gaps = 60/247 (24%)
Query: 657 KGSPYLAKITGEGRKRNQISVGSCSEVSFPGKVSDSDIRS-----LNASIQAPSGLEEPC 711
K +P EG ++ + +E + + R+ +I P GL
Sbjct: 1 KPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDA 60
Query: 712 FLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSL 771
+ +G G+ + G++ V+V G IKN P + E G+ F +
Sbjct: 61 KVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSFGSFTFT- 119
Query: 772 TEGKTHEENPFTVDTRDAGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCN 831
+ +
Sbjct: 120 ------------------------------------------------VAAKNKKGEVKT 131
Query: 832 AGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPG 891
G V+I GP + + + Y + G + VK HI G
Sbjct: 132 YGGDKFEVSITGP------AEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEG 185
Query: 892 SPFKVEV 898
SPFK +
Sbjct: 186 SPFKQVL 192
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation,
actin-binding, cytoplasm, cytoskeleton, disease
mutation, phosphoprotein; 1.65A {Homo sapiens}
Length = 89
Score = 101 bits (254), Expect = 4e-26
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 210 RVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKA--EIDFKDRKDGSCYVSY 267
+V A G GL + Q F V +AG L + V GP EI K VSY
Sbjct: 1 KVVAKGLGLSKAYVGQKSSFTVDCSKAGNNMLLVGVHGPRTPCEEILVKHVGSRLYSVSY 60
Query: 268 VVAEPGEYRVGIKFNDQHIPDSPYKLFV 295
++ + GEY + +K+ +HIP SPY++ V
Sbjct: 61 LLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
Score = 96.7 bits (241), Expect = 2e-24
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 807 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNF 866
V A G GL++ G K+ F VD AG L V + GP +EI +H G +
Sbjct: 2 VVAKGLGLSKAYVGQKSSFTVDCSKAGNNMLLVGVHGPRTP-----CEEILVKHVGSRLY 56
Query: 867 EVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V Y+++D+GEY L+VKWG +HIPGSP++V V
Sbjct: 57 SVSYLLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
Score = 90.2 bits (224), Expect = 6e-22
Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKA--EITY 625
V A G GL G+ FT+ AG + L + V GP EI
Sbjct: 2 VVAKGLGLSKAYVGQKSSFTVDCSKAG-------------NNMLLVGVHGPRTPCEEILV 48
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
+VSYL GEY + VK+G +HI GSPY +
Sbjct: 49 KHVGSRLYSVSYLLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
Score = 86.7 bits (215), Expect = 7e-21
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 400 VHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG---YKVRYT 456
V A G GL++ G K+ F VD AG L V + GP + G Y V Y
Sbjct: 2 VVAKGLGLSKAYVGQKSSFTVDCSKAGNNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYL 61
Query: 457 PLVPGDYYVSLKYNGYHIVGSPFKVK 482
G+Y + +K+ HI GSP++V
Sbjct: 62 LKDKGEYTLVVKWGHEHIPGSPYRVV 87
Score = 68.2 bits (167), Expect = 2e-14
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 44 GYGGLSLSIEGPSKA--EIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G L + + GP EI K ++SY + G Y + +K+ H+ GSP+
Sbjct: 28 GNNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGHEHIPGSPYRVV 87
Query: 102 I 102
+
Sbjct: 88 V 88
Score = 65.5 bits (160), Expect = 3e-13
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV 200
L V P E+ + V LY+V ++ K+ G +T+ V++ HIPGSP++ V
Sbjct: 31 MLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
Score = 63.6 bits (155), Expect = 1e-12
Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 317 ADKPTQFLVR-KNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIK 375
+ + F V L V P ++ ++ + YS+ ++ ++ G + + +K
Sbjct: 14 VGQKSSFTVDCSKAGNNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVK 73
Query: 376 FNGVHIPGSPLRIKV 390
+ HIPGSP R+ V
Sbjct: 74 WGHEHIPGSPYRVVV 88
Score = 57.8 bits (140), Expect = 1e-10
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
L + P E +K + + +S+ ++ G + + VK HI SP+++ V
Sbjct: 32 LLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGHEHIPGSPYRVVV 88
Score = 48.9 bits (117), Expect = 2e-07
Identities = 8/43 (18%), Positives = 22/43 (51%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
P ++ +++ S+ Y +++G + L +K+ +H+ G
Sbjct: 39 PRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGHEHIPG 81
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Length = 108
Score = 99.4 bits (248), Expect = 5e-25
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 193 GSPFQFTVGPLRDGGAHRVHAGGPGLERGEQ-NQPCEFNVWTREAGAGSLAISVEGPSK- 250
GS V +V GPGL G + F V + +AG L + V GP
Sbjct: 1 GSSGSSGVVD-----PSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGL 55
Query: 251 -AEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDA 302
++ D DG+ V+Y ++ G Y V +K+ D+ IP SP+K+ V P DA
Sbjct: 56 VEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVLPT-YDA 107
Score = 89.0 bits (221), Expect = 2e-21
Identities = 38/104 (36%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGLAE-IKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVS 441
GS V DP+ V G GL +++ V F VD+ AG L V + GP +
Sbjct: 1 GSSGSSGVV----DPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGLV 56
Query: 442 MDCTEVEEG---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
V+ G + V YTP G Y VS+KY I SPFKVK
Sbjct: 57 EPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVK 100
Score = 87.1 bits (216), Expect = 1e-20
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAE-IKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVS 848
GS V DP+ V G GL +++ V F VD+ AG L V + GP +
Sbjct: 1 GSSGSSGVV----DPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGLV 56
Query: 849 VKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ G V Y G Y++ VK+ D+ IP SPFKV+V
Sbjct: 57 E-----PVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKV 101
Score = 84.4 bits (209), Expect = 8e-20
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 18/117 (15%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGV-SGEPCLFTISTKGAGAGSPFQFTVGPLRDGGL 611
GS V + V GPGL SGV + FT+ + AG L
Sbjct: 1 GSSGSSGV--VDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAG-------------LAPL 45
Query: 612 SMAVEGPSKAEITY--HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT 666
+ V GP DN DGT V+Y P+ G Y ++VK+ ++ I SP+ K+
Sbjct: 46 EVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVL 102
Score = 66.7 bits (163), Expect = 1e-13
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
L V P G+ E + + DG + V + P + G + VSV+Y D IP SPF+ V P
Sbjct: 44 PLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVLP 103
Query: 203 LRD 205
D
Sbjct: 104 TYD 106
Score = 64.8 bits (158), Expect = 7e-13
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 44 GYGGLSLSIEGPSK--AEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G L + + GP + DN DG+ ++Y P++ G Y++++K+AD + SPF K
Sbjct: 41 GLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVK 100
Query: 102 IV 103
++
Sbjct: 101 VL 102
Score = 62.9 bits (153), Expect = 4e-12
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 315 VMADKPTQFLV--RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNI 372
V A F V K G L+ +V+ P G + + +++ + P + G + +
Sbjct: 25 VRARVLQSFTVDSSKAGL-APLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMV 83
Query: 373 HIKFNGVHIPGSPLRIKV 390
+K+ IP SP ++KV
Sbjct: 84 SVKYADEEIPRSPFKVKV 101
Score = 59.4 bits (144), Expect = 5e-11
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 658 GSPYLA--------KITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEE 709
GS + KI G G V + SF S + + L + P GL E
Sbjct: 1 GSSGSSGVVDPSKVKIAGPGLGSG---VRARVLQSFTVDSSKAGLAPLEVRVLGPRGLVE 57
Query: 710 PCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINV 753
P + +G +++TP + G ++VSVK I SPFK+ V
Sbjct: 58 PVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKV 101
Score = 47.1 bits (112), Expect = 1e-06
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
P G V+ + DN DGT ++ Y P +EG + +++K+ + +
Sbjct: 52 PRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPR 94
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 128
Score = 97.2 bits (242), Expect = 5e-24
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
Query: 190 HIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGE--QNQPCEFNVWTR---EAGAGSLAIS 244
F V R+ GPG+E + + +F V +R + G +
Sbjct: 3 SGSSGHFPARVKVEPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAH 62
Query: 245 VEGPSKAEIDF--KDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDA 302
+ PS A + D DG+ V Y E G + V + ++D IP+SP+K+ V+
Sbjct: 63 IANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVTEG-CQP 121
Query: 303 HK 304
Sbjct: 122 SS 123
Score = 87.6 bits (217), Expect = 1e-20
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 377 NGVHIPGSPLRIKVGKGEADPAAVHATGNGL--AEIKSGVKTDFIVDT---CNAGAGTLA 431
+ P R+KV + D + + G G+ ++ TDF VD+ G +
Sbjct: 2 SSGSSGHFPARVKV-EPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIK 60
Query: 432 VTIDGPSKVSMDCTEVEEG---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCT 484
I PS S +C + Y+V YTP G + V + Y+ I SPFKV T
Sbjct: 61 AHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVT 116
Score = 79.9 bits (197), Expect = 6e-18
Identities = 25/129 (19%), Positives = 43/129 (33%), Gaps = 17/129 (13%)
Query: 548 HCQDAGSPFKLYVDSIPS-GYVTAYGPGLISGV--SGEPCLFTISTKGA-GAGSPFQFTV 603
P ++ V+ + +GPG+ FT+ ++ G
Sbjct: 3 SGSSGHFPARVKVEPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGG------ 56
Query: 604 GPLRDGGLSMAVEGPSKAEITYH--DNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPY 661
+ + PS A DN DGT V Y P G + + V + + I SP+
Sbjct: 57 -----DHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPF 111
Query: 662 LAKITGEGR 670
+T +
Sbjct: 112 KVAVTEGCQ 120
Score = 78.7 bits (194), Expect = 1e-17
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 284 QHIP--DSPYKLFVSPAMGDAHKLEIAQ--FPQGVVMADKPTQFLVRKNGAVGA----LD 335
P ++ V PA D ++++ V + T F V +
Sbjct: 2 SSGSSGHFPARVKVEPA-VDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIK 60
Query: 336 AKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKGEA 395
A + +PSG +CF+ Y + + P E G+H + + ++ V IP SP ++ V +G
Sbjct: 61 AHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVTEG-C 119
Query: 396 DPAAVHATG 404
P++ ++G
Sbjct: 120 QPSSGPSSG 128
Score = 78.3 bits (193), Expect = 2e-17
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 789 AGSPLRIKVGKGEADPAAVHATGNGL--AEIKSGVKTDFIVDT---CNAGAGTLAVTIDG 843
P R+KV + D + + G G+ ++ TDF VD+ G + I
Sbjct: 7 GHFPARVKV-EPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAHIAN 65
Query: 844 PSKVSVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
PS S E F ++V+Y ++G +++ V + D IP SPFKV V
Sbjct: 66 PSGAST-----ECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAV 115
Score = 67.6 bits (165), Expect = 1e-13
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
+ A + +P G + + + + DG Y V + P E G+H V V Y D+ IP SPF+ V
Sbjct: 58 HIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVTE 117
Query: 203 LRDGGAHRVHAGG 215
+ G
Sbjct: 118 GCQ--PSSGPSSG 128
Score = 63.3 bits (154), Expect = 4e-12
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGER 756
+ A I PSG CF+ +G + +TP E G H+V V V I NSPFK+ V E
Sbjct: 59 IKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVTEG 118
Query: 757 EVGDAKKVKVFG 768
G
Sbjct: 119 --CQPSSGPSSG 128
Score = 60.6 bits (147), Expect = 3e-11
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 43 QGYGGLSLSIEGPSKAEI--QCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTA 100
G + I PS A DNADG+ + Y P E G +++ + + D + SPF
Sbjct: 54 VGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKV 113
Query: 101 KIV 103
+
Sbjct: 114 AVT 116
Score = 47.5 bits (113), Expect = 1e-06
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
PSG + + DN DGT + Y P E+GLH + + ++ +
Sbjct: 66 PSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPN 108
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo
sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Length = 96
Score = 96.0 bits (239), Expect = 5e-24
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPSKA--EIDFKDRKDGSCYV 265
A +V GPGL + Q F V +AG + + V GP E+ K + V
Sbjct: 6 ASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNV 65
Query: 266 SYVVAEPGEYRVGIKFNDQHIPDSPYKLFV 295
+Y V E G+Y + +K+ D+ +P SP+K+ V
Sbjct: 66 TYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
Score = 94.1 bits (234), Expect = 3e-23
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 802 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHT 861
+D + V G GL++ G K F VD AG + V + GP E++ +H
Sbjct: 4 SDASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCE-----EVYVKHM 58
Query: 862 GRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
G + V Y V+++G+Y+LIVKWGD+ +PGSPFKV+V
Sbjct: 59 GNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
Score = 84.5 bits (209), Expect = 5e-20
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 395 ADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG---Y 451
+D + V G GL++ G K F VD AG + V + GP + G Y
Sbjct: 4 SDASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVY 63
Query: 452 KVRYTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
V YT GDY + +K+ + GSPFKVK
Sbjct: 64 NVTYTVKEKGDYILIVKWGDESVPGSPFKVK 94
Score = 82.6 bits (204), Expect = 3e-19
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKA--EITY 625
V GPGL G+ FT+ A + + V GP E+
Sbjct: 9 VVTRGPGLSQAFVGQKNSFTVDCSKA-------------GTNMMMVGVHGPKTPCEEVYV 55
Query: 626 HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKI 665
+ V+Y G+Y + VK+G++ + GSP+ K+
Sbjct: 56 KHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVKV 95
Score = 66.0 bits (161), Expect = 2e-13
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 126 VGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVR 185
VG T + V P E+ + + + +Y V + KE G + + V+
Sbjct: 21 VGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVK 80
Query: 186 YKDIHIPGSPFQFTV 200
+ D +PGSPF+ V
Sbjct: 81 WGDESVPGSPFKVKV 95
Score = 63.3 bits (154), Expect = 2e-12
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 43 QGYGGLSLSIEGPSKA--EIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTA 100
G + + + GP E+ K + N++Y E G YI+ +K+ D V GSPF
Sbjct: 34 AGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKV 93
Query: 101 KI 102
K+
Sbjct: 94 KV 95
Score = 62.9 bits (153), Expect = 2e-12
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 317 ADKPTQFLVRKNGAVGA-LDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIK 375
+ F V + A + V P ++ +++ + Y++ + +E G + + +K
Sbjct: 21 VGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVK 80
Query: 376 FNGVHIPGSPLRIKV 390
+ +PGSP ++KV
Sbjct: 81 WGDESVPGSPFKVKV 95
Score = 60.2 bits (146), Expect = 2e-11
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 690 SDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPF 749
S + + + P E ++K + N +++T +E G +++ VK + SPF
Sbjct: 32 SKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPF 91
Query: 750 KINV 753
K+ V
Sbjct: 92 KVKV 95
Score = 48.3 bits (115), Expect = 4e-07
Identities = 8/43 (18%), Positives = 21/43 (48%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
P ++ ++ + ++ Y +E+G + L +K+ + V G
Sbjct: 46 PKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESVPG 88
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 115
Score = 96.4 bits (240), Expect = 7e-24
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 193 GSPFQFTVGPLRDGGAHRVHAGGPGLERGE--QNQPCEFNVWTREAGAGSLAISVEGPSK 250
GS + G A +V A GPGL + P EF + R+AG G L + + P
Sbjct: 1 GSSG--SSGA---HDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEG 55
Query: 251 AEIDF--KDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPAMGDAHK 304
+D DG+ VSY+ G Y + IK+ IP SP+++ P GDA
Sbjct: 56 KPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPT-GDASS 110
Score = 84.5 bits (209), Expect = 9e-20
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGL--AEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKV 440
GS G D + V A+G GL + I + + +F +D +AG G L V I P
Sbjct: 1 GSS----GSSGAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGK 56
Query: 441 SMDCTEVEEG---YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTG 485
+ G Y V Y P + G Y +++KY G I SPF++
Sbjct: 57 PKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALP 104
Score = 83.7 bits (207), Expect = 2e-19
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGL--AEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKV 847
GS G D + V A+G GL + I + + +F +D +AG G L V I P
Sbjct: 1 GSS----GSSGAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGK 56
Query: 848 SVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ R G + V Y+ G Y + +K+G D IP SPF++
Sbjct: 57 PK-----KANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHA 102
Score = 82.6 bits (204), Expect = 4e-19
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 19/121 (15%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGV--SGEPCLFTISTKGAGAGSPFQFTVGPLRDGG 610
GS + + V A GPGL + + P FTI + AG +G
Sbjct: 1 GSSGS--SGAHDASKVRASGPGLNASGIPASLPVEFTIDARDAG-------------EGL 45
Query: 611 LSMAVEGPSKAEITYH--DNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGE 668
L++ + P + DN DGT VSYLP G Y I +K+G I SP+
Sbjct: 46 LTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPT 105
Query: 669 G 669
G
Sbjct: 106 G 106
Score = 69.5 bits (170), Expect = 2e-14
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 312 QGVVMADKPTQFLVRKNGA-VGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIH 370
+ A P +F + A G L +++ P G I+ Y++ ++P +G +
Sbjct: 23 ASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRY 82
Query: 371 NIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATG 404
I IK+ G IP SP RI D ++ ++G
Sbjct: 83 TITIKYGGDEIPYSPFRIHA-LPTGDASSGPSSG 115
Score = 68.7 bits (168), Expect = 3e-14
Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 12/119 (10%)
Query: 658 GSPYLA--------KITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEE 709
GS + + +G G + I V F D+ L I P G +
Sbjct: 1 GSSGSSGAHDASKVRASGPGLNASGIPASL--PVEFTIDARDAGEGLLTVQILDPEGKPK 58
Query: 710 PCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFG 768
++ +G +S+ P G + +++K G I SPF+I+ GDA G
Sbjct: 59 KANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPT--GDASSGPSSG 115
Score = 66.0 bits (161), Expect = 4e-13
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
L+ + P G + A I + DG Y V ++P G +T++++Y IP SPF+ P
Sbjct: 45 LLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALP 104
Query: 203 LRDGGAHRV 211
D +
Sbjct: 105 TGDASSGPS 113
Score = 62.1 bits (151), Expect = 8e-12
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 44 GYGGLSLSIEGPS--KAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G G L++ I P + +DN DG+ +SY P G Y I +K+ + SPF
Sbjct: 42 GEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIH 101
Query: 102 IVGEG 106
+ G
Sbjct: 102 ALPTG 106
Score = 48.3 bits (115), Expect = 5e-07
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
P G K I DN DGT ++ Y P G + + +K+ GD +
Sbjct: 53 PEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPY 95
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 124
Score = 93.7 bits (233), Expect = 7e-23
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 193 GSPFQFTVGPLRDGGAHRVHAGGPGLERGEQ-NQPCEFNVWTREAGAGSLAISVEGPSKA 251
GS G A + A GPG+ + + F V + AG G + +V P
Sbjct: 1 GSSGSSGTGD-----ASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGT 55
Query: 252 EIDF--KDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
E + + +DG+ + Y A+PG Y + ++F IP+SP+ + +
Sbjct: 56 EAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMATDG 104
Score = 89.5 bits (222), Expect = 2e-21
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 383 GSPLRIKVGKGEADPAAVHATGNGLAE-IKSGVKTDFIVDTCNAGAGTLAVTIDGP--SK 439
GS G D + ATG G+A +K+G + F+VD AG G + T+ P ++
Sbjct: 1 GSSGSSGTG----DASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTE 56
Query: 440 VSMDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGKDLGERGG 493
D E E+G Y + YT PG Y + +++ G I SPF V T ++
Sbjct: 57 AEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMATDGEVTAVEE 111
Score = 84.5 bits (209), Expect = 1e-19
Identities = 39/132 (29%), Positives = 50/132 (37%), Gaps = 19/132 (14%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGLISGVS-GEPCLFTISTKGAGAGSPFQFTVGPLRDGGL 611
GS S A GPG+ S V GE F + K AG G +
Sbjct: 1 GSSGSSGT-GDASK-CLATGPGIASTVKTGEEVGFVVDAKTAG-------------KGKV 45
Query: 612 SMAVEGPSKAEITY--HDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKIT-GE 668
+ V P E +N+DGT + Y PG Y I V+FG I SP+ T GE
Sbjct: 46 TCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMATDGE 105
Query: 669 GRKRNQISVGSC 680
+ V +C
Sbjct: 106 VTAVEEAPVNAC 117
Score = 81.4 bits (201), Expect = 2e-18
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 790 GSPLRIKVGKGEADPAAVHATGNGLAE-IKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVS 848
GS G D + ATG G+A +K+G + F+VD AG G + T+ P
Sbjct: 1 GSSGSSGTG----DASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTE 56
Query: 849 VKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
E +++ Y G Y++ V++G IP SPF V
Sbjct: 57 A-----EADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMA 101
Score = 71.0 bits (174), Expect = 8e-15
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 44 GYGGLSLSIEGP--SKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G G ++ ++ P ++AE +N DG+ +I Y +PG Y+I ++F + SPFT
Sbjct: 41 GKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVM 100
Query: 102 IVGEGSNRQREKIQRQREAVPVT 124
E + P +
Sbjct: 101 ATDGEVTAVEEAPVNACPSGPSS 123
Score = 66.8 bits (163), Expect = 2e-13
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 315 VMADKPTQFLV--RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNI 372
V + F+V + G G + V++P GTE + + + Y I + + G + I
Sbjct: 25 VKTGEEVGFVVDAKTAGK-GKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVI 83
Query: 373 HIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSG 413
+++F GV IP SP + GE + SG
Sbjct: 84 YVRFGGVDIPNSPFTVMATDGEVTAVEEAPVNACPSGPSSG 124
Score = 65.6 bits (160), Expect = 5e-13
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTV-- 200
++ TV +P G +A++ E EDG Y + + + G + + VR+ + IP SPF
Sbjct: 44 KVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMATD 103
Query: 201 GPLRDGGAHRVHAGGPGLERG 221
G + V+A G G
Sbjct: 104 GEVTAVEEAPVNACPSGPSSG 124
Score = 59.1 bits (143), Expect = 1e-10
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 664 KITGEGRKRNQISVGSCSEVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGI 723
TG G + G EV F + + ++ P G E + + +G I
Sbjct: 15 LATGPGIAS-TVKTGE--EVGFVVDAKTAGKGKVTCTVLTPDGTEAEADVIENEDGTYDI 71
Query: 724 SFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQ 769
+T + G++++ V+ GV I NSPF + + EV ++ V
Sbjct: 72 FYTAAKPGTYVIYVRFGGVDIPNSPFTVMATDGEVTAVEEAPVNAC 117
Score = 46.4 bits (110), Expect = 3e-06
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
P G + + +N DGT + Y + G + + ++F G +
Sbjct: 52 PDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPN 94
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like
fold, filamin domain, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 113
Score = 82.9 bits (205), Expect = 3e-19
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 199 TVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREA-----GAGSLAISV------EG 247
+ G + + G L R + Q F + ++A G G + V +
Sbjct: 2 SSGSSGEVDPAKCVLQGEDLHRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKK 61
Query: 248 PSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKLFVSP 297
S +D KDG+ Y+SY EPG Y V + +QH+ SP+ + V
Sbjct: 62 DSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTVRR 111
Score = 78.7 bits (194), Expect = 1e-17
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAV------EGPSKA 621
G L + FT+ K A + GG ++ V + S
Sbjct: 14 CVLQGEDLHRAREKQTASFTLLCKDAAGE--------IMGRGGDNVQVAVVPKDKKDSPV 65
Query: 622 EITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGE 668
DNKDGT +SY P PG Y + V E+H++GSP+ + +
Sbjct: 66 RTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTVRRK 112
Score = 73.7 bits (181), Expect = 6e-16
Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 393 GEADPAAVHATGNGLAEIKSGVKTDFIVDT-------CNAGAGTLAVTIDGP----SKVS 441
GE DPA G L + F + G + V + S V
Sbjct: 7 GEVDPAKCVLQGEDLHRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVR 66
Query: 442 MDCTEVEEG-YKVRYTPLVPGDYYVSLKYNGYHIVGSPFKVKCTGK 486
+ ++G Y + YTP PG Y V + H+ GSPF V K
Sbjct: 67 TMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTVRRK 112
Score = 70.2 bits (172), Expect = 9e-15
Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 10/106 (9%)
Query: 800 GEADPAAVHATGNGLAEIKSGVKTDFIVDT-------CNAGAGTLAVTIDGPSKVSVKKY 852
GE DPA G L + F + G + V + K K
Sbjct: 7 GEVDPAKCVLQGEDLHRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDK---KDS 63
Query: 853 KDEIFTRHTGRNNFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
+ + + Y ++ G Y + V + H+ GSPF V V
Sbjct: 64 PVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTV 109
Score = 59.8 bits (145), Expect = 4e-11
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 44 GYGGLSLSI------EGPSKAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSP 97
G GG ++ + + S +DN DG+ ISY P EPG Y + + + HV+GSP
Sbjct: 45 GRGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSP 104
Query: 98 FTAKI 102
FT +
Sbjct: 105 FTVTV 109
Score = 57.5 bits (139), Expect = 2e-10
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 135 KMPGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGS 194
G ++ + + +DG Y + + PKE GV+TV V K+ H+ GS
Sbjct: 44 MGRGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGS 103
Query: 195 PFQFTVGP 202
PF TV
Sbjct: 104 PFTVTVRR 111
Score = 54.8 bits (132), Expect = 3e-09
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 316 MADKPTQFLVRKNGAVG--------ALDAKVISPSGTEDDCFIQPIDGDN--YSIRFMPR 365
+ F + A G + V+ + D + Y I + P+
Sbjct: 25 REKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPK 84
Query: 366 ENGIHNIHIKFNGVHIPGSPLRIKV 390
E G++ + + H+ GSP + V
Sbjct: 85 EPGVYTVWVCIKEQHVQGSPFTVTV 109
Score = 48.6 bits (116), Expect = 4e-07
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 704 PSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGER 756
++ +G IS+TP+E G + V V H++ SPF + V +
Sbjct: 60 KKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTVRRK 112
Score = 41.7 bits (98), Expect = 1e-04
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 2 PSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
+ + +++DN DGT + Y P+E G++ + + HVQG
Sbjct: 60 KKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQG 102
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 95
Score = 82.2 bits (203), Expect = 4e-19
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 128 STCKLTFKMP-GITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRY 186
+P + +++ V P G T EI + +DG V + P E+G+H + ++Y
Sbjct: 15 GFKPFDLVIPFAVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKY 74
Query: 187 KDIHIPGSPFQFTVGPLRDG 206
HIP SP QF V G
Sbjct: 75 MGSHIPESPLQFYVNYPNSG 94
Score = 76.8 bits (189), Expect = 3e-17
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 319 KPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNG 378
KP ++ G + +V PSG I ++R+ P E G+H +HIK+ G
Sbjct: 17 KPFDLVIPFAVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMG 76
Query: 379 VHIPGSPLRIKVG 391
HIP SPL+ V
Sbjct: 77 SHIPESPLQFYVN 89
Score = 72.9 bits (179), Expect = 6e-16
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 213 AGGPGLERGEQNQPCEFNVWTREAGAGSLAISVEGPS--KAEIDFKDRKDGSCYVSYVVA 270
+ G G +P + + G + V PS A + D KDG+ V Y
Sbjct: 5 SSGVSDMNGLGFKPFDLVI-PFAVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPT 63
Query: 271 EPGEYRVGIKFNDQHIPDSPYKLFVSPA 298
E G + + IK+ HIP+SP + +V+
Sbjct: 64 EVGLHEMHIKYMGSHIPESPLQFYVNYP 91
Score = 66.4 bits (162), Expect = 1e-13
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 16/98 (16%)
Query: 566 GYVTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPS--KAEI 623
G + G ++G+ +P I +R G ++ V PS A
Sbjct: 1 GSSGSSGVSDMNGLGFKPFDLVIPF--------------AVRKGEITGEVHMPSGKTATP 46
Query: 624 TYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKGSPY 661
DNKDGTV V Y PT G +++ +K+ HI SP
Sbjct: 47 EIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPL 84
Score = 62.5 bits (152), Expect = 3e-12
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 682 EVSFPGKVSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMG 741
++ P V +I + PSG + +G + + + P EVG H + +K MG
Sbjct: 20 DLVIPFAVRKGEIT---GEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMG 76
Query: 742 VHIKNSPFKINVGE 755
HI SP + V
Sbjct: 77 SHIPESPLQFYVNY 90
Score = 62.2 bits (151), Expect = 4e-12
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Query: 398 AAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG---YKVR 454
+ ++G D ++ G + + PS + V+ VR
Sbjct: 1 GSSGSSGVSDMNGLGFKPFDLVI-PFAVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVR 59
Query: 455 YTPLVPGDYYVSLKYNGYHIVGSPFKVK 482
Y P G + + +KY G HI SP +
Sbjct: 60 YAPTEVGLHEMHIKYMGSHIPESPLQFY 87
Score = 61.4 bits (149), Expect = 8e-12
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 1 MPSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
MPSG P I DN DGTV++ Y P E GLHE+ +K+ G H+
Sbjct: 38 MPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPE 81
Score = 59.5 bits (144), Expect = 4e-11
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 44 GYGGLSLSIEGPS--KAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G ++ + PS A + DN DG++ + Y PTE G + +++K+ H+ SP
Sbjct: 28 RKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFY 87
Query: 102 IVGEGS 107
+ S
Sbjct: 88 VNYPNS 93
Score = 54.8 bits (132), Expect = 2e-09
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 6/94 (6%)
Query: 805 AAVHATGNGLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRN 864
+ ++G D ++ G + + PS K EI G
Sbjct: 1 GSSGSSGVSDMNGLGFKPFDLVI-PFAVRKGEITGEVHMPSG---KTATPEIVDNKDG-- 54
Query: 865 NFEVKYIVRDRGEYLLIVKWGDDHIPGSPFKVEV 898
V+Y + G + + +K+ HIP SP + V
Sbjct: 55 TVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYV 88
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.18.10
Length = 93
Score = 81.3 bits (201), Expect = 6e-19
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 315 VMADKPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHI 374
+P ++ G L +V PSG I ++R+ P E G+H + I
Sbjct: 5 SSGLRPFNLVIPFAVQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGI 64
Query: 375 KFNGVHIPGSPLRIKVG 391
K++G HIPGSPL+ V
Sbjct: 65 KYDGNHIPGSPLQFYVD 81
Score = 79.8 bits (197), Expect = 2e-18
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 217 GLERGEQNQPCEFNVWTREAGAGSLAISVEGPS--KAEIDFKDRKDGSCYVSYVVAEPGE 274
G +P + G L V PS A + D KDG+ V Y E G
Sbjct: 1 GSSGSSGLRPFNLVI-PFAVQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGL 59
Query: 275 YRVGIKFNDQHIPDSPYKLFVSPA 298
+++GIK++ HIP SP + +V
Sbjct: 60 HQMGIKYDGNHIPGSPLQFYVDAI 83
Score = 76.3 bits (188), Expect = 4e-17
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 143 DLSATVTSPGGVTEDAEINEVEDGLYAVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGP 202
+L+ V P G T I + +DG V + P E G+H + ++Y HIPGSP QF V
Sbjct: 23 ELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDA 82
Query: 203 LRDGGAHRVHAGGPGL 218
+ GP
Sbjct: 83 INSR------HSGPSS 92
Score = 70.1 bits (172), Expect = 6e-15
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 4/90 (4%)
Query: 406 GLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEG---YKVRYTPLVPGD 462
G + + ++ G L + PS + + VRY P G
Sbjct: 1 GSSGSSGLRPFNLVI-PFAVQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGL 59
Query: 463 YYVSLKYNGYHIVGSPFKVKCTGKDLGERG 492
+ + +KY+G HI GSP + + G
Sbjct: 60 HQMGIKYDGNHIPGSPLQFYVDAINSRHSG 89
Score = 69.8 bits (171), Expect = 9e-15
Identities = 26/101 (25%), Positives = 35/101 (34%), Gaps = 16/101 (15%)
Query: 574 GLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPS--KAEITYHDNKDG 631
G P I G L+ V PS A DNKDG
Sbjct: 1 GSSGSSGLRPFNLVIPFAVQK--------------GELTGEVRMPSGKTARPNITDNKDG 46
Query: 632 TVAVSYLPTAPGEYKIAVKFGEKHIKGSPYLAKITGEGRKR 672
T+ V Y PT G +++ +K+ HI GSP + +
Sbjct: 47 TITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRH 87
Score = 64.0 bits (156), Expect = 9e-13
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 697 LNASIQAPSGLEEPCFLKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGER 756
L ++ PSG + +G + + + P E G H + +K G HI SP + V
Sbjct: 24 LTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAI 83
Query: 757 EVG 759
Sbjct: 84 NSR 86
Score = 61.7 bits (150), Expect = 6e-12
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 813 GLAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSVKKYKDEIFTRHTGRNNFEVKYIV 872
G + + ++ G L + PS + V+Y
Sbjct: 1 GSSGSSGLRPFNLVI-PFAVQKGELTGEVRMPSGKTA-----RPNITDNKDGTITVRYAP 54
Query: 873 RDRGEYLLIVKWGDDHIPGSPFKVEV 898
++G + + +K+ +HIPGSP + V
Sbjct: 55 TEKGLHQMGIKYDGNHIPGSPLQFYV 80
Score = 61.3 bits (149), Expect = 9e-12
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 44 GYGGLSLSIEGPS--KAEIQCKDNADGSLNISYRPTEPGYYIINLKFADHHVEGSPFTAK 101
G L+ + PS A DN DG++ + Y PTE G + + +K+ +H+ GSP
Sbjct: 20 QKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFY 79
Query: 102 I 102
+
Sbjct: 80 V 80
Score = 60.1 bits (146), Expect = 2e-11
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 1 MPSGNVDKPVIEDNHDGTVSLHYDPREEGLHELALKFNGDHVQG 44
MPSG +P I DN DGT+++ Y P E+GLH++ +K++G+H+ G
Sbjct: 30 MPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPG 73
Score = 27.0 bits (60), Expect = 7.8
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
Query: 553 GSPFKLYVDSIPSGYVTAYGPGL 575
GSP + YVD+I S GP
Sbjct: 73 GSPLQFYVDAINSR---HSGPSS 92
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 74.3 bits (182), Expect = 1e-13
Identities = 105/599 (17%), Positives = 185/599 (30%), Gaps = 150/599 (25%)
Query: 239 GSLAISVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKL----- 293
GSL + P+ + ++ + ++ EP E G +D+ P +P +L
Sbjct: 14 GSLEHVLLVPTASFFIASQLQE--QFNK-ILPEPTE---GFAADDE--PTTPAELVGKFL 65
Query: 294 -FVSPAMGDAHKLEIAQFPQ--GVVMADKPTQFLVRKNGAVGALDAKVISPSGTEDDCFI 350
+VS ++ QF Q + + + +L + + AL AK++ + T
Sbjct: 66 GYVSS---LVEPSKVGQFDQVLNLCLTEFENCYLEGND--IHALAAKLLQENDTTLVKTK 120
Query: 351 QPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNG---- 406
+ I NY R S L VG+G A A+ G G
Sbjct: 121 ELIK--NY---ITARIMAKRPFD------KKSNSALFRAVGEGNAQLVAIFG-GQGNTDD 168
Query: 407 -LAEIKSGVKT--DFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGYKV----RYTPLV 459
E++ +T + D A TL+ I T+ G +
Sbjct: 169 YFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQ---GLNILEWLENPSNT 225
Query: 460 PGDYY-----VSLKYNG------YHIVGSPFKVKCTGKDLGE-RGGQETSSVTVETVQKV 507
P Y +S G Y + K G GE R + ++ + +
Sbjct: 226 PDKDYLLSIPISCPLIGVIQLAHYVVTA-----KLLGFTPGELRSYLKGATGHSQGLV-T 279
Query: 508 AKNKTQGPVIPIFKSDASKVTCKGMGLKKAYAQKQNMFTI--HCQDA----GSPFKLYVD 561
A I S S ++KA +F I C +A P + D
Sbjct: 280 AV------AIAETDSWESFFVS----VRKAI---TVLFFIGVRCYEAYPNTSLPPSILED 326
Query: 562 SIPSGYVTAYGPGLISGVSG------EPCLFTISTKGAGAG--------SPFQFTV-GPL 606
S+ + P + +S + + ++ V GP
Sbjct: 327 SLENNEGV---PSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPP 383
Query: 607 RD-GGLSMAVE------GPSKAEITYHDNKDGTVAVSYLP-TAPGEYKIAVKFGEKHIKG 658
+ GL++ + G ++ I + + K + +LP +P F H
Sbjct: 384 QSLYGLNLTLRKAKAPSGLDQSRIPFSERKL-KFSNRFLPVASP--------F---H--- 428
Query: 659 SPYLAKIT---GEGRKRNQISVGSCSEVSFPGKVSD----SDIRSLNASIQ---APSGLE 708
S L + + +N +S + ++ P V D SD+R L+ SI +
Sbjct: 429 SHLLVPASDLINKDLVKNNVSFNA-KDIQIP--VYDTFDGSDLRVLSGSISERIVDCIIR 485
Query: 709 EPCFLKKIPNGNLG--ISFTPREVG--SHLVSVKK--MGVHIKNSPFKINVGEREVGDA 761
P + + F P L K GV + I G ++
Sbjct: 486 LPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRV------IVAGTLDINPD 538
Score = 58.9 bits (142), Expect = 6e-09
Identities = 89/564 (15%), Positives = 160/564 (28%), Gaps = 203/564 (35%)
Query: 156 EDAEINEVEDGLYAV--HFVPKELG---VHTVSVR-------------------YKDIHI 191
E +++ + + L F L +H ++ + +
Sbjct: 73 EPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIM 132
Query: 192 PGSPFQFTVGPL-----RDGGAHRVHA--GGPGLERGEQNQPC--EF-NVWTR------- 234
PF +G A ++ A GG G E +++
Sbjct: 133 AKRPFDKKSNSALFRAVGEGNA-QLVAIFGGQG-----NTDDYFEELRDLYQTYHVLVGD 186
Query: 235 --EAGAGSLAISVEGPSKAEIDFKDRKDGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYK 292
+ A +L+ + AE F + + + P PD Y
Sbjct: 187 LIKFSAETLSELIRTTLDAEKVFTQGLN----ILEWLENPSN-----------TPDKDYL 231
Query: 293 L--FVS-PAMGDAHKLEIAQFPQGVVMADK----PTQFLVRKNGAVGALD----AKVISP 341
L +S P +G + Q VV A P + GA G A I+
Sbjct: 232 LSIPISCPLIG------VIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAE 285
Query: 342 SGTEDDCFIQPIDGDNYSIRFMPRENGIHNIHIKFNGVHIPGSPLRIKVGKGEADPAAVH 401
+ + + F + I + F I G +R EA P
Sbjct: 286 TDSWES-FF---------------VSVRKAITVLF---FI-G--VRCY----EAYP---- 315
Query: 402 ATGNGLAEIKSGVKTDFIVDTCNAGAGT----LAVTIDGPSKVSMDCTEVEEGYKVRYT- 456
+ + + D+ G L+++ ++ +V++ V T
Sbjct: 316 ---------NTSLPPSILEDSLENNEGVPSPMLSIS--NLTQ-----EQVQD--YVNKTN 357
Query: 457 PLVPGDY--YVSLKYNGY-HIV--GSPF----------KVKC-TGKD-----LGERGGQE 495
+P +SL NG ++V G P K K +G D ER +
Sbjct: 358 SHLPAGKQVEISL-VNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKF 416
Query: 496 TSS---VTV--------ETVQKVAKNKTQGPV--------IPIFKSDASKVTCKGMGLKK 536
++ V + K+ + V IP++ T G L+
Sbjct: 417 SNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYD------TFDGSDLRV 470
Query: 537 AYAQKQNMFTIHCQDAGSPFKLYVD-----SIPSGYVTAYGPGLISGVSGEPCLFTISTK 591
++ +L V + ++ +GPG SG+ L +
Sbjct: 471 L---SGSISERIVDCI---IRLPVKWETTTQFKATHILDFGPGGASGLGV---LTHRNKD 521
Query: 592 GAG-----AGSPFQFTVGPLRDGG 610
G G AG+ + P D G
Sbjct: 522 GTGVRVIVAGT---LDINPDDDYG 542
Score = 48.5 bits (115), Expect = 1e-05
Identities = 57/309 (18%), Positives = 97/309 (31%), Gaps = 104/309 (33%)
Query: 485 GKDLGERGGQETSSVTVETVQKV---AKNKTQ---GPVIP-IFKSDASKVTC-----KGM 532
G DL +TS Q V A N + G I I ++ +T KG
Sbjct: 1632 GMDL-----YKTSKA----AQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGK 1682
Query: 533 GLKKAYAQKQNMFTIHCQDAGSPFKL---YVDSIPSGYVTAYGPGLISGVSGE------- 582
+++ Y M D + ++ + Y T G
Sbjct: 1683 RIRENY---SAMIFETIVDGKLKTEKIFKEINEHSTSY-TFRSE------KGLLSATQFT 1732
Query: 583 -PCLFTIS--------TKG--------AG------------AGS-PFQFTVGPLRDGGLS 612
P L + +KG AG A + V + G++
Sbjct: 1733 QPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMT 1792
Query: 613 M--AVEGPSKAEITYHDNKDGTVAVSYLPTAPGEYKIAVKFGEKHIKG-SPYLAKITGEG 669
M AV Y G +A++ PG ++A F ++ ++ + K TG
Sbjct: 1793 MQVAVPRDELGRSNY-----GMIAIN-----PG--RVAASFSQEALQYVVERVGKRTGW- 1839
Query: 670 RKRNQISVGSCSEVSF--PGK--VSDSDIRSLNASIQAPSGLEEPCFLKKIPNGNLGISF 725
V++ + V+ D+R+L+ + ++ L+KI L S
Sbjct: 1840 ---------LVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIK----LQKIDIIELQKSL 1886
Query: 726 TPREVGSHL 734
+ EV HL
Sbjct: 1887 SLEEVEGHL 1895
Score = 45.0 bits (106), Expect = 1e-04
Identities = 54/295 (18%), Positives = 83/295 (28%), Gaps = 112/295 (37%)
Query: 17 GTVSLHYDPREEGLHELALKFNGDHVQGYGGLS--LSIEGPSKAEIQC---KDNADGSLN 71
G P L L+ + ++ G S LSI ++ ++Q K N+
Sbjct: 307 GVRCYEAYPNTS-LPPSILEDSLEN--NEGVPSPMLSISNLTQEQVQDYVNKTNS----- 358
Query: 72 ISYRPTEPGYYI--INLKFADHHV-EGSPFT--------AKIVGEGSNRQREKIQRQREA 120
+ P I +N A + V G P + K Q +R
Sbjct: 359 --HLPAGKQVEISLVNG--AKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSER-- 412
Query: 121 VPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLY-------AVHFV 173
KL F F L V SP + A +
Sbjct: 413 ----------KLKFSN----RF-L--PVASP----------------FHSHLLVPASDLI 439
Query: 174 PKELGVHTVSVRYKDIHIP------GSPFQ-------------FTVGPLR-----DGGAH 209
K+L + VS KDI IP GS + P++ A
Sbjct: 440 NKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKAT 499
Query: 210 RVHAGGPGLERG-----EQNQPCEFNVWTREAGAGS---LAISVEGPSKAEIDFK 256
+ GPG G +N+ G G +A +++ + FK
Sbjct: 500 HILDFGPGGASGLGVLTHRNK----------DGTGVRVIVAGTLDINPDDDYGFK 544
Score = 44.3 bits (104), Expect = 2e-04
Identities = 64/375 (17%), Positives = 110/375 (29%), Gaps = 149/375 (39%)
Query: 129 TCKLTFKMPGITAFDLSATVTSPGGV----------TEDAEINEVEDGLYAVHFVPKELG 178
T KL PG L G+ + ++ V + + F+ G
Sbjct: 252 TAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFI----G 307
Query: 179 VHTVSVRYKDIHIPGSPFQFTVGPLRDGGAHRVHAGGPGLERGEQNQPCEFNVWTREAGA 238
V Y + +P S + ++ E E G
Sbjct: 308 VRCYEA-YPNTSLPPSILEDSL------------------ENNE--------------GV 334
Query: 239 GSLAISVEGPSKAEIDFKDRKDGSCYVSYVVAE-PGEYRVGIK-FNDQHIPDSPYKLFVS 296
S +S+ ++ ++ YV+ + P +V I N L VS
Sbjct: 335 PSPMLSISNLTQEQVQ--------DYVNKTNSHLPAGKQVEISLVN------GAKNLVVS 380
Query: 297 PAMGDAHKLEIAQFPQGVVMADKPTQFLVRKNGAVGALD-AKVISPSGTEDDCFIQ--PI 353
G L G+ + +RK A LD +++ P F +
Sbjct: 381 ---GPPQSL------YGLNLT-------LRKAKAPSGLDQSRI--P-------FSERKL- 414
Query: 354 DGDNYSIRFMPRENGI----HNIH-----------IKFNGVHIPGSPLRIKVGKGEADPA 398
+S RF+P + H+ + N V ++I P
Sbjct: 415 ---KFSNRFLP----VASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI--------P- 458
Query: 399 AVHATGNG--LAEIKSGVKTDFIVD-----------TCNAGAGTLAVT--ID-GP---SK 439
V+ T +G L + + ++ IVD T A T +D GP S
Sbjct: 459 -VYDTFDGSDLRVLSGSI-SERIVDCIIRLPVKWETTTQFKA-----THILDFGPGGASG 511
Query: 440 VSMDCTEVEEGYKVR 454
+ + ++G VR
Sbjct: 512 LGVLTHRNKDGTGVR 526
Score = 42.3 bits (99), Expect = 9e-04
Identities = 51/320 (15%), Positives = 82/320 (25%), Gaps = 128/320 (40%)
Query: 207 GAHRVHAGGPGLERGEQNQPCEFNVWTREA--------GAGSLAISVEGPSKAEIDF--- 255
G+ G G++ + +VW R A G L I + P I F
Sbjct: 1625 GSQEQ---GMGMDL-YKTSKAAQDVWNR-ADNHFKDTYGFSILDIVINNPVNLTIHFGGE 1679
Query: 256 KDRK--------------DGSCYVSYVVAEPGEYRVGIKFNDQHIPDSPYKL--FVSPAM 299
K ++ DG + E E+ F F PA+
Sbjct: 1680 KGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRS---EKGLLSATQFTQPAL 1736
Query: 300 GDAHKL--EIAQF---------PQGVVMA--------------------D---------K 319
E A F P A
Sbjct: 1737 -----TLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGM 1791
Query: 320 PTQFLV------RKNGAVGALDAKVISPSGTEDDCFIQPIDGDNYSIRFMPRENG----I 369
Q V R N + A++ ++ S +++ +Q + + + + G I
Sbjct: 1792 TMQVAVPRDELGRSNYGMIAINPGRVAASFSQEA--LQYV------VERVGKRTGWLVEI 1843
Query: 370 HNIHIKFNGVHIPGSPLRIKVGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNAGAGT 429
N +N + + G+ A+ N L IK K D I
Sbjct: 1844 VN----YN---VENQ--QYVAA-GDL--RALDTVTNVLNFIKLQ-KIDII---------- 1880
Query: 430 LAVTIDGPSKVSMDCTEVEE 449
+ S+ EVE
Sbjct: 1881 -------ELQKSLSLEEVEG 1893
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 124
Score = 63.5 bits (154), Expect = 3e-12
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 568 VTAYGPGLISGVSGEPCLFTISTKGAGAGSPFQFTVGPLRDGGLSMAVEGPSKAEITYHD 627
+GPGL + V F I + +S E ++ + D
Sbjct: 20 SEIWGPGLKADVVLPARYFYIQAVDTSGNKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLD 79
Query: 628 NKDGTVAVSY-LPTAPGEYKIAVKFGEKHIKGSPYLAKITG 667
KDG+ V Y + + K+ +KF +H+ SPY+ K +G
Sbjct: 80 RKDGSFIVRYRMYASYKNLKVEIKFQGQHVAKSPYILKGSG 120
Score = 56.9 bits (137), Expect = 5e-10
Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 14/100 (14%)
Query: 208 AHRVHAGGPGLERGEQNQPCEFNV---------WTREAGAGSLAISVEGPSKAEIDFK-- 256
+ GPGL+ F + +T G + V P +
Sbjct: 17 PEKSEIWGPGLKADVVLPARYFYIQAVDTSGNKFTSSPGEKVFQVKVSAPEEQFTRVGVQ 76
Query: 257 --DRKDGSCYVSYVVAE-PGEYRVGIKFNDQHIPDSPYKL 293
DRKDGS V Y + +V IKF QH+ SPY L
Sbjct: 77 VLDRKDGSFIVRYRMYASYKNLKVEIKFQGQHVAKSPYIL 116
Score = 49.6 bits (118), Expect = 2e-07
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 43 QGYGGLSLSIEGPSK----AEIQCKDNADGSLNISYRPTE-PGYYIINLKFADHHVEGSP 97
G + + P + +Q D DGS + YR + +KF HV SP
Sbjct: 54 PGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQGQHVAKSP 113
Query: 98 FTAKIVGEGS 107
+ K G S
Sbjct: 114 YILKGSGPSS 123
Score = 47.7 bits (113), Expect = 9e-07
Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 13/112 (11%)
Query: 797 VGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNA---------GAGTLAVTIDGPSKV 847
G+ + P G GL F + + G V + P +
Sbjct: 10 GGERQLSPEKSEIWGPGLKADVVLPARYFYIQAVDTSGNKFTSSPGEKVFQVKVSAPEE- 68
Query: 848 SVKKYKDEIFTRHTGRNNFEVKYIVRDRGEYLLI-VKWGDDHIPGSPFKVEV 898
+ ++ R G F V+Y + + L + +K+ H+ SP+ ++
Sbjct: 69 QFTRVGVQVLDRKDGS--FIVRYRMYASYKNLKVEIKFQGQHVAKSPYILKG 118
Score = 44.6 bits (105), Expect = 1e-05
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 15/111 (13%)
Query: 390 VGKGEADPAAVHATGNGLAEIKSGVKTDFIVDTCNA---------GAGTLAVTIDGPSK- 439
G+ + P G GL F + + G V + P +
Sbjct: 10 GGERQLSPEKSEIWGPGLKADVVLPARYFYIQAVDTSGNKFTSSPGEKVFQVKVSAPEEQ 69
Query: 440 ---VSMDCTEVEEG-YKVRYTP-LVPGDYYVSLKYNGYHIVGSPFKVKCTG 485
V + + ++G + VRY + V +K+ G H+ SP+ +K +G
Sbjct: 70 FTRVGVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQGQHVAKSPYILKGSG 120
Score = 39.6 bits (92), Expect = 7e-04
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 318 DKPTQFLVRKNGAVGALDAKVISPSGTEDDCFIQPIDGDN--YSIRF-MPRENGIHNIHI 374
D G KV +P +Q +D + + +R+ M + I
Sbjct: 44 DTSGNKFTSSPGE-KVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYRMYASYKNLKVEI 102
Query: 375 KFNGVHIPGSPLRIKV 390
KF G H+ SP +K
Sbjct: 103 KFQGQHVAKSPYILKG 118
Score = 37.7 bits (87), Expect = 0.003
Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 137 PGITAFDLSATVTSPGGVTEDAEINEVEDGLYAVHF-VPKELGVHTVSVRYKDIHIPGSP 195
PG F + + ++ + +DG + V + + V ++++ H+ SP
Sbjct: 54 PGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQGQHVAKSP 113
Query: 196 FQFT-VGP 202
+ GP
Sbjct: 114 YILKGSGP 121
Score = 30.0 bits (67), Expect = 1.4
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 8 KPVIEDNHDGTVSLHYDPREE-GLHELALKFNGDHVQG 44
+ D DG+ + Y ++ +KF G HV
Sbjct: 74 GVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQGQHVAK 111
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.0 bits (74), Expect = 0.22
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 6/32 (18%)
Query: 540 QKQNMFTIHCQDAGSPFKLYV-DSIPSGYVTA 570
+KQ + + + KLY DS P+ + A
Sbjct: 18 EKQALKKLQ-----ASLKLYADDSAPALAIKA 44
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 33.7 bits (76), Expect = 0.31
Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 71/201 (35%)
Query: 10 VIEDNHDGTVSLHYDPREEGLH-ELALKFNGD---H---VQGYGGLSLSIEGPSKAEIQC 62
V + + T+S+ ++ EL +K + H V Y +
Sbjct: 417 VEKQPKESTISIP------SIYLELKVKLENEYALHRSIVDHY------------NIPKT 458
Query: 63 KDNADGSLNISYRPTEPGY---YII-NLKFADHHVEGSPFT----------AKIVGEGSN 108
D+ D P Y +I +LK +H + F KI + +
Sbjct: 459 FDSDDLIP-----PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513
Query: 109 RQREKIQRQREAVPVTEVGSTCKLTFKMPGITAFDLSATVTSPGGVTEDAEINEVEDGLY 168
+ + + +L F P I D P + +N + D
Sbjct: 514 WN----------ASGSILNTLQQLKFYKPYICDND-------P---KYERLVNAILD--- 550
Query: 169 AVHFVPKELGVHTVSVRYKDI 189
F+PK + + + +Y D+
Sbjct: 551 ---FLPK-IEENLICSKYTDL 567
>2o2t_A Multiple PDZ domain protein; structural protein, structural
genomics, structural genomics consortium, SGC; 2.70A
{Homo sapiens}
Length = 117
Score = 30.0 bits (68), Expect = 1.2
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 713 LKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVG---ERE----VGDAKKVK 765
L K P+G LG S VG + ++G+ ++ +I G R+ D + +
Sbjct: 26 LLKPPSGGLGFSV----VGLRSENRGELGIFVQ----EIQEGSVAHRDGRLKETD-QILA 76
Query: 766 VFGQSLTEGKTHEENPFTVDT-RDAGSPLRIKVGKG 800
+ GQ+L + TH++ + + A +++ + +G
Sbjct: 77 INGQALDQTITHQQ---AISILQKAKDTVQLVIARG 109
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding
protein, membrane, sensory transduction, vision; 1.55A
{Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Length = 96
Score = 28.0 bits (63), Expect = 4.1
Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 713 LKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLT 772
L K LG+S +P E+G ++ + I+ +I+ + + GD K G +L
Sbjct: 14 LMKKAGKELGLSLSPNEIG---CTIADL---IQGQYPEID-SKLQRGD-IITKFNGDAL- 64
Query: 773 EGKTHEENPFTVDT-RDAGSPLRIKVGKGEADPAA 806
EG + + + A + ++V + + A+
Sbjct: 65 EGLPFQV---SYALFKGANGKVSMEVTRPKPAAAS 96
>1tbu_A Peroxisomal acyl-coenzyme A thioester hydrolase 1; yeast
peroxisomal thioesterase, , domain swapping, iodine
SOAK, siras; 2.20A {Saccharomyces cerevisiae} SCOP:
d.38.1.3
Length = 118
Score = 28.5 bits (64), Expect = 4.2
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 169 AVHFVPKELGVHTVSVRYKDIHIPGSPFQFTVGPLRDGG--AHR-VHA 213
++H VP ++ + P + + V LR+G H+ V A
Sbjct: 53 SLHTVPLNFFPTSLHSYFIKGGDPRTKITYHVQNLRNGRNFIHKQVSA 100
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease,
zinc, lipoprotein, hydrolase, structural proteomics in
europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP:
b.3.2.1 c.56.5.1
Length = 426
Score = 29.6 bits (66), Expect = 4.6
Identities = 17/124 (13%), Positives = 42/124 (33%), Gaps = 19/124 (15%)
Query: 407 LAEIKSGVKTDFIVDTCNAGAGTLAVTIDGPSKVSMDCTEVEEGYKVRYTPLVPGDYYVS 466
+ ++ GVK + D + V + + G Y L+PG Y ++
Sbjct: 291 IKQVHLGVK-GQVFDQNGNPLPNVIVEVQDRKH-ICPYRTNKYGE--YYLLLLPGSYIIN 346
Query: 467 LKYNGYHIVGSPFKVKCTGKDLGERGGQETSSVTVE-------TVQKVAKNKTQGPVIPI 519
+ G+ + + Q S++ + + + + P+IP+
Sbjct: 347 VTVPGHDPHITKVII--------PEKSQNFSALKKDILLPFQGQLDSIPVSNPSCPMIPL 398
Query: 520 FKSD 523
+++
Sbjct: 399 YRNL 402
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight
junction protein, protein associated to tight junctions,
PATJ, structural genomics; NMR {Homo sapiens}
Length = 128
Score = 28.2 bits (63), Expect = 5.2
Identities = 14/103 (13%), Positives = 37/103 (35%), Gaps = 14/103 (13%)
Query: 713 LKKIPNGNLGISFTPREVGSHLVSVKKMGVHIK----NSPFKINVGEREVGDAKKVKVFG 768
+++ G LG S V ++ K+ + +K S + + D + + +
Sbjct: 31 IERPSTGGLGFSV----VALRSQNLGKVDIFVKDVQPGSVADRD-QRLKEND-QILAINH 84
Query: 769 QSLTEGKTHEENPFTVDT-RDAGSPLRIKVGKGEADPAAVHAT 810
L + +H++ + + LR+ V + + +
Sbjct: 85 TPLDQNISHQQ---AIALLQQTTGSLRLIVAREPVHTKSSTSG 124
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide
binding protein; NMR {Drosophila melanogaster}
Length = 106
Score = 27.3 bits (61), Expect = 7.5
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 713 LKKIPNGNLGISFTPREVGSHLVSVKKMGVHIKNSPFKINVGEREVGDAKKVKVFGQSLT 772
L K LG+S +P E+G ++ + I+ +I+ + + GD K G +L
Sbjct: 8 LMKKAGKELGLSLSPNEIG---CTIADL---IQGQYPEID-SKLQRGD-IITKFNGDAL- 58
Query: 773 EGKTHEENPFTVDT-RDAGSPLRIKVGK 799
EG + + A + ++V +
Sbjct: 59 EGLPFQV---CYALFKGANGKVSMEVTR 83
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.136 0.402
Gapped
Lambda K H
0.267 0.0692 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 13,936,154
Number of extensions: 892567
Number of successful extensions: 1955
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1652
Number of HSP's successfully gapped: 379
Length of query: 898
Length of database: 6,701,793
Length adjustment: 102
Effective length of query: 796
Effective length of database: 3,853,851
Effective search space: 3067665396
Effective search space used: 3067665396
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (27.7 bits)