BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1924
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/120 (98%), Positives = 120/120 (100%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN
Sbjct: 93 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 152
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVLGILELLKYHQRVLYID+DVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 153 DIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 212
Score = 177 bits (450), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/84 (98%), Positives = 84/84 (100%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN
Sbjct: 93 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 152
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVLGILELLKYHQRVLYID+DVH
Sbjct: 153 DIVLGILELLKYHQRVLYIDIDVH 176
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1
PE=2 SV=1
Length = 576
Score = 240 bits (612), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 109/120 (90%), Positives = 115/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGLYEFCQLS+GGSVA AVKLNKQ ++I INW GGLHHAKKSEASGFCYVN
Sbjct: 94 NVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVN 153
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 154 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 213
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 79/84 (94%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGLYEFCQLS+GGSVA AVKLNKQ ++I INW GGLHHAKKSEASGFCYVN
Sbjct: 94 NVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVN 153
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 154 DIVLAILELLKYHQRVLYIDIDIH 177
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 108/120 (90%), Positives = 116/120 (96%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLSAGGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 80/84 (95%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLSAGGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIH 178
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/120 (89%), Positives = 116/120 (96%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLSAGGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVN 154
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRV+YID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 155 DIVLAILELLKYHQRVVYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Score = 160 bits (406), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 80/84 (95%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLSAGGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVN 154
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRV+YID+D+H
Sbjct: 155 DIVLAILELLKYHQRVVYIDIDIH 178
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/120 (89%), Positives = 115/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Score = 160 bits (405), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 79/84 (94%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIH 178
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/120 (89%), Positives = 115/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Score = 160 bits (405), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 79/84 (94%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIH 178
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/120 (89%), Positives = 115/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Score = 160 bits (405), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 79/84 (94%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIH 178
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/120 (89%), Positives = 115/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Score = 160 bits (405), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 79/84 (94%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIH 178
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/120 (89%), Positives = 115/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 79/84 (94%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 154
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 155 DIVLAILELLKYHQRVLYIDIDIH 178
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 105/120 (87%), Positives = 114/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA AVKLN+Q +++ +NW GGLHHAKKSEASGFCYVN
Sbjct: 96 NVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVN 155
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 156 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 215
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/84 (83%), Positives = 78/84 (92%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA AVKLN+Q +++ +NW GGLHHAKKSEASGFCYVN
Sbjct: 96 NVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVN 155
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 156 DIVLAILELLKYHQRVLYIDIDIH 179
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 105/120 (87%), Positives = 114/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA AVKLN+Q +++ +NW GGLHHAKKSEASGFCYVN
Sbjct: 96 NVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVN 155
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD+
Sbjct: 156 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 215
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/84 (83%), Positives = 78/84 (92%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA AVKLN+Q +++ +NW GGLHHAKKSEASGFCYVN
Sbjct: 96 NVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVN 155
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 156 DIVLAILELLKYHQRVLYIDIDIH 179
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 105/120 (87%), Positives = 115/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVN 154
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRV+YID+D+HHGDGVEEAFYTTDRVM+VSFHKYGEYFPGTGDLRD+
Sbjct: 155 DIVLAILELLKYHQRVVYIDIDIHHGDGVEEAFYTTDRVMSVSFHKYGEYFPGTGDLRDI 214
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 79/84 (94%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA+AVKLNKQ ++I +NW GGLHHAKKSEASGFCYVN
Sbjct: 95 NVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVN 154
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRV+YID+D+H
Sbjct: 155 DIVLAILELLKYHQRVVYIDIDIH 178
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 227 bits (579), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 103/120 (85%), Positives = 114/120 (95%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCP+FDGLYEFCQLS+GGS+AAA KLNKQ +I INW GGLHHAKKSEASGFCY N
Sbjct: 99 NVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTN 158
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVLGILELLKYH+RVLY+D+DVHHGDGVEEAFYTTDRVMTVSFHKYG++FPGTGDL+D+
Sbjct: 159 DIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDI 218
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 78/84 (92%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCP+FDGLYEFCQLS+GGS+AAA KLNKQ +I INW GGLHHAKKSEASGFCY N
Sbjct: 99 NVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTN 158
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVLGILELLKYH+RVLY+D+DVH
Sbjct: 159 DIVLGILELLKYHKRVLYVDIDVH 182
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1
Length = 471
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 99/120 (82%), Positives = 113/120 (94%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL++FC+ SAGGS+ AAVKLN+Q ++I INWGGGLHHAKKSEASGFCYVN
Sbjct: 107 NVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVN 166
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVLGILELLK +RVLYID+DVHHGDGVEEAFYTTDRVMTVSFHK+G++FPGTG +RD+
Sbjct: 167 DIVLGILELLKMFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV 226
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 78/84 (92%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL++FC+ SAGGS+ AAVKLN+Q ++I INWGGGLHHAKKSEASGFCYVN
Sbjct: 107 NVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVN 166
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVLGILELLK +RVLYID+DVH
Sbjct: 167 DIVLGILELLKMFKRVLYIDIDVH 190
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 94/120 (78%), Positives = 110/120 (91%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NV EDCPVFDG+Y FCQ+S+GGS+ AVK+N + S++ INW GGLHHAKKSEASGFCY N
Sbjct: 90 NVREDCPVFDGMYNFCQISSGGSIGCAVKVNSKESDVAINWAGGLHHAKKSEASGFCYTN 149
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLK+H+RVLYID+D+HHGDGVEEAFYTTDRVMTVSFHKYG+YFPGTGD++D+
Sbjct: 150 DIVLSILELLKHHERVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGDYFPGTGDVKDI 209
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
Query: 146 RVEKFNVIESRVMFTPDF--FLQILIVNPFFLYPSFPV--NVGEDCPVFDGLYEFCQLSA 201
R K + +E + D+ FL+++ + Y V NV EDCPVFDG+Y FCQ+S+
Sbjct: 50 RPRKASELELTNFHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISS 109
Query: 202 GGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYID 261
GGS+ AVK+N + S++ INW GGLHHAKKSEASGFCY NDIVL ILELLK+H+RVLYID
Sbjct: 110 GGSIGCAVKVNSKESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYID 169
Query: 262 VDVH 265
+D+H
Sbjct: 170 IDIH 173
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1
Length = 488
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/120 (81%), Positives = 107/120 (89%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGL+EFCQLS GGSVA AVKLN+Q +++ +NW GGLHHAKKSEASGFCYVN
Sbjct: 96 NVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVN 155
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLKYHQRVLYID+D+HHGDGVEEAFYTTDRVMTVS FPGTGDLRD+
Sbjct: 156 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSEVSMVNNFPGTGDLRDI 215
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 70/84 (83%), Positives = 78/84 (92%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGL+EFCQLS GGSVA AVKLN+Q +++ +NW GGLHHAKKSEASGFCYVN
Sbjct: 96 NVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVN 155
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLKYHQRVLYID+D+H
Sbjct: 156 DIVLAILELLKYHQRVLYIDIDIH 179
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 115/141 (81%), Gaps = 1/141 (0%)
Query: 5 DFFLQILIVN-PFFLYPSFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICI 63
DF ++ N F S NVG+DCPVFDGLYE+C +S GGS+ A +LN+ ++ +
Sbjct: 84 DFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGKCDVAV 143
Query: 64 NWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRV 123
N+ GGLHHAKKSEASGFCY+NDIVLGI+ELL+YH RVLYID+DVHHGDGVEEAFYTTDRV
Sbjct: 144 NYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRV 203
Query: 124 MTVSFHKYGEYFPGTGDLRDM 144
MT SFHKYGE+FPGTG+LRD+
Sbjct: 204 MTCSFHKYGEFFPGTGELRDI 224
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
Query: 162 DFFLQILIVN-PFFLYPSFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICI 220
DF ++ N F S NVG+DCPVFDGLYE+C +S GGS+ A +LN+ ++ +
Sbjct: 84 DFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGKCDVAV 143
Query: 221 NWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDVDVH 265
N+ GGLHHAKKSEASGFCY+NDIVLGI+ELL+YH RVLYID+DVH
Sbjct: 144 NYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVH 188
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 95/119 (79%), Positives = 104/119 (87%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVFDGLYEFC +SAGGS+ AA +LN +EI INW GGLHHAKK EASGFCYVN
Sbjct: 92 NVGDDCPVFDGLYEFCSISAGGSIGAAQELNSGNAEIAINWAGGLHHAKKREASGFCYVN 151
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD 143
DI L LELLKYHQRVLYID+DVHHGDGVEE FYTTDRVMT SFHK+GEYFPGTG ++D
Sbjct: 152 DIALAALELLKYHQRVLYIDIDVHHGDGVEEFFYTTDRVMTCSFHKFGEYFPGTGHIKD 210
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 83/130 (63%), Gaps = 7/130 (5%)
Query: 136 PGTGDLRDMERVEKFNVIESRVMFTPDFFLQILIVNPFFLYPSFPVNVGEDCPVFDGLYE 195
P DM R IE TPD + F NVG+DCPVFDGLYE
Sbjct: 53 PVRATRNDMTRCHTDEYIEFLWRVTPDTMEK-------FQPHQLKFNVGDDCPVFDGLYE 105
Query: 196 FCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQ 255
FC +SAGGS+ AA +LN +EI INW GGLHHAKK EASGFCYVNDI L LELLKYHQ
Sbjct: 106 FCSISAGGSIGAAQELNSGNAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQ 165
Query: 256 RVLYIDVDVH 265
RVLYID+DVH
Sbjct: 166 RVLYIDIDVH 175
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/120 (77%), Positives = 104/120 (86%), Gaps = 1/120 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGE+CPV DGLY FCQ AG SV AVK N +I INW GGLHHAKK EASGFCYVN
Sbjct: 109 NVGEECPVLDGLYSFCQTYAGASVGGAVKFN-HGHDIAINWSGGLHHAKKCEASGFCYVN 167
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLK+H+RVLY+D+D+HHGDGVEEAFYTTDRVMTVSFHK+G+YFPGTGD+RD+
Sbjct: 168 DIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDI 227
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 83/133 (62%), Gaps = 10/133 (7%)
Query: 134 YFPGTGDLRDMERVEKFNVIESRVMFTPDFFL-QILIVNPFFLYPSFPVNVGEDCPVFDG 192
Y P R++ R I TP+ QI ++ F NVGE+CPV DG
Sbjct: 68 YRPNPARERELCRFHAEEYINFLRSVTPETQQDQIRLLKRF--------NVGEECPVLDG 119
Query: 193 LYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLK 252
LY FCQ AG SV AVK N +I INW GGLHHAKK EASGFCYVNDIVL ILELLK
Sbjct: 120 LYSFCQTYAGASVGGAVKFN-HGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLK 178
Query: 253 YHQRVLYIDVDVH 265
+H+RVLY+D+D+H
Sbjct: 179 HHERVLYVDIDIH 191
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/120 (77%), Positives = 104/120 (86%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVGEDCPVFDGLY FCQ AGGSV +VKLN +I INW GGLHHAKK EASGFCYVN
Sbjct: 103 NVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVN 162
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDM 144
DIVL ILELLK H+RVLY+D+D+HHGDGVEEAFY TDRVMTVSFHK+G+YFPGTG ++D+
Sbjct: 163 DIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDI 222
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/84 (76%), Positives = 70/84 (83%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVGEDCPVFDGLY FCQ AGGSV +VKLN +I INW GGLHHAKK EASGFCYVN
Sbjct: 103 NVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVN 162
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL ILELLK H+RVLY+D+D+H
Sbjct: 163 DIVLAILELLKQHERVLYVDIDIH 186
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 125/157 (79%), Gaps = 6/157 (3%)
Query: 3 TPDF--FLQILIVNPFFLYPS--FPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQA 58
+PD+ FLQ + L+P+ N+GEDCPVF+ L+EFCQL AGG++ AA +LN +
Sbjct: 65 SPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNKL 124
Query: 59 SEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFY 118
+I INW GGLHHAKK +ASGFCY+ND+VLGILELLK+H RVLYID+DVHHGDGVEEAFY
Sbjct: 125 CDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFY 184
Query: 119 TTDRVMTVSFHKYGE-YFPGTGDLRDM-ERVEKFNVI 153
TDRVMTVSFHK+G+ +FPGTGD++++ ER KF I
Sbjct: 185 FTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAI 221
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 89/124 (71%), Gaps = 4/124 (3%)
Query: 146 RVEKFNVIESRVMFTPDF--FLQILIVNPFFLYPS--FPVNVGEDCPVFDGLYEFCQLSA 201
R K IE +PD+ FLQ + L+P+ N+GEDCPVF+ L+EFCQL A
Sbjct: 51 RPHKAYPIEMAQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYA 110
Query: 202 GGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYID 261
GG++ AA +LN + +I INW GGLHHAKK +ASGFCY+ND+VLGILELLK+H RVLYID
Sbjct: 111 GGTIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYID 170
Query: 262 VDVH 265
+DVH
Sbjct: 171 IDVH 174
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 86/119 (72%), Positives = 105/119 (88%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
N+GEDCP+F GL+++C L AGGSV A +LN + ++I INW GGLHHAKKSEASGFCYVN
Sbjct: 116 NIGEDCPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVN 175
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD 143
DIVLGILELLKYH+RVLYID+D+HHGDGV+EAF +DRVMTVSFH++G+YFPG+G + D
Sbjct: 176 DIVLGILELLKYHKRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRFGQYFPGSGSIMD 234
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 5/122 (4%)
Query: 149 KFNVIESRVMFTPDF--FLQILIVNPFFLYPS---FPVNVGEDCPVFDGLYEFCQLSAGG 203
K + + V T D+ FLQ + P N+GEDCP+F GL+++C L AGG
Sbjct: 78 KLDAADISVFHTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGG 137
Query: 204 SVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDVD 263
SV A +LN + ++I INW GGLHHAKKSEASGFCYVNDIVLGILELLKYH+RVLYID+D
Sbjct: 138 SVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDID 197
Query: 264 VH 265
+H
Sbjct: 198 IH 199
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1
Length = 428
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+GILELLKYH RVLYID+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 68/84 (80%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+GILELLKYH RVLYID+D+H
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIH 172
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+GILELLKYH RVLYID+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 68/84 (80%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+GILELLKYH RVLYID+D+H
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIH 172
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+GILELLKYH RVLYID+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 68/84 (80%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+GILELLKYH RVLYID+D+H
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIH 172
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+GILELLKYH RVLYID+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 68/84 (80%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+GILELLKYH RVLYID+D+H
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIH 172
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1
Length = 428
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+GILELLKYH RVLYID+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 68/84 (80%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+GILELLKYH RVLYID+D+H
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIH 172
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
++GEDCPVF GLY++C + +GGS+ A+KLN + +I INW GGLHHA+K EASGFCYVN
Sbjct: 98 HIGEDCPVFPGLYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEASGFCYVN 157
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKY-GEYFPGTGDLRD 143
DIVL ILELLK+H RVLYID+DVHHGDGV+EAFY TDRVMTVSFHK+ G++FPGTGD+ +
Sbjct: 158 DIVLAILELLKFHARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFGGDFFPGTGDIDE 217
Query: 144 M 144
+
Sbjct: 218 I 218
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 91/148 (61%), Gaps = 9/148 (6%)
Query: 119 TTDRVMTVSFHKYGEYFPGT-GDLRDMERVEKFNVIESRVMFTPDFFLQILIVNPFFLYP 177
T + V+ HK + D DM + + ++ TP+ + V F
Sbjct: 42 TNNLVLNYGLHKKMHLYKARPADAEDMLKFHSEDYVDFLERVTPENINEWKDVKRF---- 97
Query: 178 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 237
++GEDCPVF GLY++C + +GGS+ A+KLN + +I INW GGLHHA+K EASGF
Sbjct: 98 ----HIGEDCPVFPGLYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEASGF 153
Query: 238 CYVNDIVLGILELLKYHQRVLYIDVDVH 265
CYVNDIVL ILELLK+H RVLYID+DVH
Sbjct: 154 CYVNDIVLAILELLKFHARVLYIDIDVH 181
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+GILELLKYH RVLY+D+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVIGILELLKYHPRVLYVDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 68/84 (80%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+GILELLKYH RVLY+D+D+H
Sbjct: 149 DIVIGILELLKYHPRVLYVDIDIH 172
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 187 bits (475), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVF GL+EFC G S+ A LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKNCDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+GILELLKYH RVLYID+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 67/84 (79%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG+DCPVF GL+EFC G S+ A LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKNCDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+GILELLKYH RVLYID+D+H
Sbjct: 149 DIVIGILELLKYHPRVLYIDIDIH 172
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1
Length = 428
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+ ILELLKYH RVLYID+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVISILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 67/84 (79%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG+DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+ ILELLKYH RVLYID+D+H
Sbjct: 149 DIVISILELLKYHPRVLYIDIDIH 172
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 97/118 (82%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
NVG DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDL 141
DIV+ ILELLKYH RVLYID+D+HHGDGV+EAFY TDRVMTVSFHKYG Y FPGTGD+
Sbjct: 149 DIVISILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDM 206
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 66/84 (78%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
NVG DCPVF GL+EFC G S+ A +LN + +I INW GGLHHAKK EASGFCYVN
Sbjct: 89 NVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVN 148
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIV+ ILELLKYH RVLYID+D+H
Sbjct: 149 DIVISILELLKYHPRVLYIDIDIH 172
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
N+G+DCP+F LY++ L G S+ A KL S+I INW GGLHHAKK+ SGFCYVN
Sbjct: 113 NIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVN 172
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKY-GEYFPGTGDLRD 143
DIVL IL LL+YH R+LYID+D+HHGDGV+EAFYTTDRV T+SFHKY GE+FPGTGDL +
Sbjct: 173 DIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTE 232
Query: 144 M 144
+
Sbjct: 233 I 233
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 63/84 (75%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
N+G+DCP+F LY++ L G S+ A KL S+I INW GGLHHAKK+ SGFCYVN
Sbjct: 113 NIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVN 172
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL IL LL+YH R+LYID+D+H
Sbjct: 173 DIVLSILNLLRYHPRILYIDIDLH 196
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
N+G+DCPVFDG YEF Q SAG S+ A+ KL + ++I INW GGLHHAK+ EASGFCYVN
Sbjct: 112 NIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYVN 171
Query: 85 DIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKY-GEYFPGTGDL 141
DIVL IL +L++ RVLYID+D+HHGDGV++AFY +DRV+TVSFHKY G++FP TG+
Sbjct: 172 DIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFPATGNF 229
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 68/84 (80%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
N+G+DCPVFDG YEF Q SAG S+ A+ KL + ++I INW GGLHHAK+ EASGFCYVN
Sbjct: 112 NIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYVN 171
Query: 242 DIVLGILELLKYHQRVLYIDVDVH 265
DIVL IL +L++ RVLYID+D+H
Sbjct: 172 DIVLAILNMLRFFPRVLYIDIDIH 195
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1
Length = 409
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 92/122 (75%), Gaps = 4/122 (3%)
Query: 22 FPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFC 81
F V+V D PVF L+++C+ AGGS++AA KLN+Q ++I INW GG+HH KK +ASGF
Sbjct: 99 FNVDVDWDGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFG 158
Query: 82 YVNDIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDL 141
YVND+VL ILELLK +RVLYI++ HGD VEEAF TDRVMTVSFHK G+ TGD+
Sbjct: 159 YVNDVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDI 214
Query: 142 RD 143
D
Sbjct: 215 SD 216
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 91/152 (59%), Gaps = 16/152 (10%)
Query: 119 TTDRVMTVSFHKYGEY-FPGTGDLRDMERVEKFNVIESRVMFTPDFFLQILIVNPFFLYP 177
T + +++ + H++ E P D D E+ I TP+ + +P +P
Sbjct: 39 THNLILSYNLHRHMEINHPDLADASDFEKFHSLEYINFLKSVTPE-----TVTDP---HP 90
Query: 178 S-------FPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAK 230
S F V+V D PVF L+++C+ AGGS++AA KLN+Q ++I INW GG+HH K
Sbjct: 91 SVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHHVK 150
Query: 231 KSEASGFCYVNDIVLGILELLKYHQRVLYIDV 262
K +ASGF YVND+VL ILELLK +RVLYI++
Sbjct: 151 KDKASGFGYVNDVVLAILELLKSFKRVLYIEI 182
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
Query: 26 VGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVND 85
+G DCP+ +G+Y++ G ++ AA +L + I INW GG HHAKK EASGFCY+ND
Sbjct: 90 LGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFCYLND 149
Query: 86 IVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDM 144
VLGIL+L + RVLY+D+D+HHGDGVE+AF T +VMTVS HK+ +FPGTGD+ D+
Sbjct: 150 AVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDI 209
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 13/136 (9%)
Query: 139 GDLRDMERVE-KFNVIESRVMFTPDFFLQILIV--------NPFFLYPSFPVNVGEDCPV 189
G L++M V+ K +E F D +LQ L +P + +G DCP+
Sbjct: 41 GLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDNDDP----ETLEYGLGYDCPI 96
Query: 190 FDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILE 249
+G+Y++ G ++ AA +L + I INW GG HHAKK EASGFCY+ND VLGIL+
Sbjct: 97 TEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFCYLNDAVLGILK 156
Query: 250 LLKYHQRVLYIDVDVH 265
L + RVLY+D+D+H
Sbjct: 157 LREKFDRVLYVDMDLH 172
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Query: 26 VGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVND 85
+G DCP+ +G+Y++ G ++ AA +L + + I +NW GG HHAKK EASGFCY+ND
Sbjct: 46 LGYDCPITEGIYDYAAAVGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLND 105
Query: 86 IVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDM 144
VLGIL+L + RVLY+D+D+HHGDGVE+AF T +VMTVS HK+ +FPGTGD+ D+
Sbjct: 106 AVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDI 165
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%)
Query: 183 VGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVND 242
+G DCP+ +G+Y++ G ++ AA +L + + I +NW GG HHAKK EASGFCY+ND
Sbjct: 46 LGYDCPITEGIYDYAAAVGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLND 105
Query: 243 IVLGILELLKYHQRVLYIDVDVH 265
VLGIL+L + RVLY+D+D+H
Sbjct: 106 AVLGILKLREKFDRVLYVDMDLH 128
>sp|Q7SXM0|HDAC8_DANRE Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1
Length = 378
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
Query: 26 VGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVND 85
+G DCPV +G++++ G ++ AA L ++ INW GG HHAKK EASG CYVND
Sbjct: 99 LGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSCYVND 158
Query: 86 IVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRD 143
VLGIL+L + + RVLY+DVD+HHGDGVE+AF T +VMTVS HK+ +FPGTGD+ D
Sbjct: 159 AVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTD 217
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 183 VGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVND 242
+G DCPV +G++++ G ++ AA L ++ INW GG HHAKK EASG CYVND
Sbjct: 99 LGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSCYVND 158
Query: 243 IVLGILELLKYHQRVLYIDVDVH 265
VLGIL+L + + RVLY+DVD+H
Sbjct: 159 AVLGILKLREKYDRVLYVDVDLH 181
>sp|B1WC68|HDAC8_RAT Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1
Length = 377
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 21 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 80
S +G DCP +G++++ GG++ AA L ++ INW GG HHAKK EASGF
Sbjct: 93 SIEYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGF 152
Query: 81 CYVNDIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTG 139
CY+ND VLGIL L + R+LY+D+D+HHGDGVE+AF T +VMTVS HK+ +FPGTG
Sbjct: 153 CYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTG 212
Query: 140 DLRDM 144
D+ D+
Sbjct: 213 DMSDV 217
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 178 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 237
S +G DCP +G++++ GG++ AA L ++ INW GG HHAKK EASGF
Sbjct: 93 SIEYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGF 152
Query: 238 CYVNDIVLGILELLKYHQRVLYIDVDVH 265
CY+ND VLGIL L + R+LY+D+D+H
Sbjct: 153 CYLNDAVLGILRLRRKFDRILYVDLDLH 180
>sp|Q8VH37|HDAC8_MOUSE Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2
Length = 377
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 21 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 80
S +G DCP +G++++ GG++ AA L ++ INW GG HHAKK EASGF
Sbjct: 93 SIEYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGF 152
Query: 81 CYVNDIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTG 139
CY+ND VLGIL L + R+LY+D+D+HHGDGVE+AF T +VMTVS HK+ +FPGTG
Sbjct: 153 CYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTG 212
Query: 140 DLRDM 144
D+ D+
Sbjct: 213 DMSDV 217
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 178 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 237
S +G DCP +G++++ GG++ AA L ++ INW GG HHAKK EASGF
Sbjct: 93 SIEYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGF 152
Query: 238 CYVNDIVLGILELLKYHQRVLYIDVDVH 265
CY+ND VLGIL L + R+LY+D+D+H
Sbjct: 153 CYLNDAVLGILRLRRKFDRILYVDLDLH 180
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 21 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 80
S +G DCP +G++++ G ++ AA L ++ INW GG HHAKK EASGF
Sbjct: 93 SIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGF 152
Query: 81 CYVNDIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTG 139
CY+ND VLGIL L + +R+LY+D+D+HHGDGVE+AF T +VMTVS HK+ +FPGTG
Sbjct: 153 CYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTG 212
Query: 140 DLRDM 144
D+ D+
Sbjct: 213 DVSDV 217
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 178 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 237
S +G DCP +G++++ G ++ AA L ++ INW GG HHAKK EASGF
Sbjct: 93 SIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGF 152
Query: 238 CYVNDIVLGILELLKYHQRVLYIDVDVH 265
CY+ND VLGIL L + +R+LY+D+D+H
Sbjct: 153 CYLNDAVLGILRLRRKFERILYVDLDLH 180
>sp|Q0VCB2|HDAC8_BOVIN Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1
Length = 377
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
Query: 21 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 80
S +G DCP +G++++ G ++ AA L ++ INW GG HHAKK EASGF
Sbjct: 93 SIEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGF 152
Query: 81 CYVNDIVLGILELLKYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTG 139
CY+ND VLGIL L + R+LY+D+D+HHGDGVE+AF T +VMTVS HK+ +FPGTG
Sbjct: 153 CYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTG 212
Query: 140 DLRDM 144
D+ D+
Sbjct: 213 DVSDV 217
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 178 SFPVNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGF 237
S +G DCP +G++++ G ++ AA L ++ INW GG HHAKK EASGF
Sbjct: 93 SIEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGF 152
Query: 238 CYVNDIVLGILELLKYHQRVLYIDVDVH 265
CY+ND VLGIL L + R+LY+D+D+H
Sbjct: 153 CYLNDAVLGILRLRRKFDRILYVDLDLH 180
>sp|Q12214|HOS1_YEAST Histone deacetylase HOS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOS1 PE=1 SV=1
Length = 470
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 92/155 (59%), Gaps = 8/155 (5%)
Query: 25 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 84
N+ DCP+F L +CQ+ G ++ L+ I INW GG HHA K ASGFCY+N
Sbjct: 165 NLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFCYIN 224
Query: 85 DIVLGILELLKYH-QRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLR 142
D+VL I L K ++ Y+D D+HHGDGVE+AF + ++ T+S H Y +FPGTG L
Sbjct: 225 DVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPGTGSLS 284
Query: 143 DMERVEKFNVIESRVMF-TPDFFLQIL---IVNPF 173
D R +K NV+ + D +L+++ IVNP
Sbjct: 285 D-SRKDK-NVVNIPLKHGCDDNYLELIASKIVNPL 317
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 182 NVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVN 241
N+ DCP+F L +CQ+ G ++ L+ I INW GG HHA K ASGFCY+N
Sbjct: 165 NLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFCYIN 224
Query: 242 DIVLGILELLKYH-QRVLYIDVDVH 265
D+VL I L K ++ Y+D D+H
Sbjct: 225 DVVLLIQRLRKAKLNKITYVDFDLH 249
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 28 EDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIV 87
ED PVF G++E L GG++ AA + + N GGGLHH + ASGFC ND
Sbjct: 90 EDTPVFAGMHEAASLLVGGTLTAADWVMSGQALHAANLGGGLHHGFRGRASGFCIYNDSA 149
Query: 88 LGILELLK-YHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTGDLRD 143
+ I + K Y RVLYID D HHGDGV+ FY V T+S H+ G Y FPGTG +++
Sbjct: 150 VAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDNPDVCTLSIHETGRYLFPGTGQIQE 207
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 185 EDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIV 244
ED PVF G++E L GG++ AA + + N GGGLHH + ASGFC ND
Sbjct: 90 EDTPVFAGMHEAASLLVGGTLTAADWVMSGQALHAANLGGGLHHGFRGRASGFCIYNDSA 149
Query: 245 LGILELL-KYHQRVLYIDVDVH 265
+ I + KY RVLYID D H
Sbjct: 150 VAIQYIQKKYSARVLYIDTDAH 171
>sp|Q56195|ACUC_STAXY Acetoin utilization protein AcuC OS=Staphylococcus xylosus GN=acuC
PE=3 SV=1
Length = 385
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 27 GEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDI 86
GED F +++ GG++ A ++ + GGGLHH+ A+GFC ND+
Sbjct: 93 GEDTLQFRMMHKHSARIVGGALNLADQIMSGTLTNGCHLGGGLHHSLPGRANGFCIYNDV 152
Query: 87 VLGILELL-KYHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTG 139
+ I L+ KY+QRVL ID D HHGDG + +FYT D+ + S H+ G++ FPG+G
Sbjct: 153 AITISYLMQKYNQRVLCIDTDAHHGDGTQWSFYTNDQALIYSIHETGKFLFPGSG 207
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 184 GEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDI 243
GED F +++ GG++ A ++ + GGGLHH+ A+GFC ND+
Sbjct: 93 GEDTLQFRMMHKHSARIVGGALNLADQIMSGTLTNGCHLGGGLHHSLPGRANGFCIYNDV 152
Query: 244 VLGILELL-KYHQRVLYIDVDVH 265
+ I L+ KY+QRVL ID D H
Sbjct: 153 AITISYLMQKYNQRVLCIDTDAH 175
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 28 EDCPVFDGLYEFCQLSAGGSVAAA-VKLNKQASEICINWGGGLHHAKKSEASGFCYVNDI 86
E+ F ++ GG++ A + ++ +A C + GGGLHHA+ ASGFC NDI
Sbjct: 94 EENGQFKHMHRHSATIVGGALTLADLIMSGKALNGC-HLGGGLHHAQPGRASGFCIYNDI 152
Query: 87 VLGILELLK-YHQRVLYIDVDVHHGDGVEEAFYTTDRVMTVSFHKYGEY-FPGTG 139
+ L K Y+QRVL ID D HHGDG + +FY + V T S H+ G++ FPG+G
Sbjct: 153 AITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSG 207
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 185 EDCPVFDGLYEFCQLSAGGSVAAA-VKLNKQASEICINWGGGLHHAKKSEASGFCYVNDI 243
E+ F ++ GG++ A + ++ +A C + GGGLHHA+ ASGFC NDI
Sbjct: 94 EENGQFKHMHRHSATIVGGALTLADLIMSGKALNGC-HLGGGLHHAQPGRASGFCIYNDI 152
Query: 244 VLGILELLK-YHQRVLYIDVDVH 265
+ L K Y+QRVL ID D H
Sbjct: 153 AITAQYLAKEYNQRVLIIDTDAH 175
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 66 GGGLHHAKKSEASGFCYVNDIVLGILELLK-YHQRVLYIDVDVHHGDGVEEAFYTTDRVM 124
GGGLHHA+ ASGFC NDI + L K Y+QRVL ID D HHGDG + +FY + V
Sbjct: 132 GGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVT 191
Query: 125 TVSFHKYGEY-FPGTG 139
T S H+ G++ FPG+G
Sbjct: 192 TYSIHETGKFLFPGSG 207
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 223 GGGLHHAKKSEASGFCYVNDIVLGILELLK-YHQRVLYIDVDVH 265
GGGLHHA+ ASGFC NDI + L K Y+QRVL ID D H
Sbjct: 132 GGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAH 175
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 66 GGGLHHAKKSEASGFCYVNDIVLGILELLK-YHQRVLYIDVDVHHGDGVEEAFYTTDRVM 124
GGGLHHA+ ASGFC NDI + L K Y+QRVL ID D HHGDG + +FY + V
Sbjct: 132 GGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVT 191
Query: 125 TVSFHKYGEY-FPGTG 139
T S H+ G++ FPG+G
Sbjct: 192 TYSIHETGKFLFPGSG 207
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 223 GGGLHHAKKSEASGFCYVNDIVLGILELLK-YHQRVLYIDVDVH 265
GGGLHHA+ ASGFC NDI + L K Y+QRVL ID D H
Sbjct: 132 GGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAH 175
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 66 GGGLHHAKKSEASGFCYVNDIVLGILELLK-YHQRVLYIDVDVHHGDGVEEAFYTTDRVM 124
GGGLHHA+ ASGFC NDI + L K Y+QRVL ID D HHGDG + +FY + V
Sbjct: 132 GGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVT 191
Query: 125 TVSFHKYGEY-FPGTG 139
T S H+ G++ FPG+G
Sbjct: 192 TYSIHETGKFLFPGSG 207
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 223 GGGLHHAKKSEASGFCYVNDIVLGILELLK-YHQRVLYIDVDVH 265
GGGLHHA+ ASGFC NDI + L K Y+QRVL ID D H
Sbjct: 132 GGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAH 175
>sp|P64376|ACUC_STAAN Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
N315) GN=acuC PE=1 SV=1
Length = 389
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 66 GGGLHHAKKSEASGFCYVNDIVLGILELLK-YHQRVLYIDVDVHHGDGVEEAFYTTDRVM 124
GGGLHHA+ ASGFC NDI + + K Y+QRVL ID D HHGDG + +FY + V
Sbjct: 132 GGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVT 191
Query: 125 TVSFHKYGEY-FPGTG 139
T S H+ G++ FPG+G
Sbjct: 192 TYSIHETGKFLFPGSG 207
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 223 GGGLHHAKKSEASGFCYVNDIVLGILELLK-YHQRVLYIDVDVH 265
GGGLHHA+ ASGFC NDI + + K Y+QRVL ID D H
Sbjct: 132 GGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAH 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.144 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,106,195
Number of Sequences: 539616
Number of extensions: 4461012
Number of successful extensions: 10631
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 10353
Number of HSP's gapped (non-prelim): 200
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)