BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1928
(105 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|312379595|gb|EFR25817.1| hypothetical protein AND_08500 [Anopheles darlingi]
Length = 836
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFGPLKSA +HYDRSGRSLGTAD+I+ER+SDAIKAMKQYNGVPLDGRPM IQLA
Sbjct: 704 INELFAEFGPLKSASVHYDRSGRSLGTADVIFERKSDAIKAMKQYNGVPLDGRPMSIQLA 763
Query: 62 ADVSVLENTVPRPV 75
+ PRPV
Sbjct: 764 TS-EIPSARPPRPV 776
>gi|158286924|ref|XP_309011.3| AGAP006733-PA [Anopheles gambiae str. PEST]
gi|157020700|gb|EAA04421.3| AGAP006733-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFGPL+SA +HYDRSGRSLGTAD+++ERRSDAIKAMKQYNGVPLDGRPM IQ+A
Sbjct: 138 INELFAEFGPLRSASVHYDRSGRSLGTADVVFERRSDAIKAMKQYNGVPLDGRPMSIQMA 197
Query: 62 ADVSVLENTVPRPV 75
+ VPRP
Sbjct: 198 TS-EIPAPRVPRPA 210
>gi|170043665|ref|XP_001849498.1| RNA and export factor binding protein [Culex quinquefasciatus]
gi|167867015|gb|EDS30398.1| RNA and export factor binding protein [Culex quinquefasciatus]
Length = 290
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGPLKSA +HYDRSGRSLGTAD+++ERR+DAIKAMKQYNGVPLDGRPM IQLA
Sbjct: 142 INELFADFGPLKSASVHYDRSGRSLGTADVVFERRADAIKAMKQYNGVPLDGRPMSIQLA 201
Query: 62 ADVSVLENTVPRPVARGGRGGASGG 86
E VPR GG S G
Sbjct: 202 TS----EIPVPRAPRLGGSSDRSSG 222
>gi|112983092|ref|NP_001037596.1| ALY [Bombyx mori]
gi|95115188|gb|ABF55960.1| ALY [Bombyx mori]
Length = 254
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 9/100 (9%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFG LKSA +HYDRSGRSLGTAD+++ER++DA+KAMKQYNGVPLDGR M IQLA
Sbjct: 116 IKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 175
Query: 62 -ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
++++ L RP AR GGAS G GT RGG
Sbjct: 176 TSEINTL-----RPEARNRIGGASVG---GTIRNNPKRGG 207
>gi|91090428|ref|XP_971598.1| PREDICTED: similar to RNA and export factor binding protein
[Tribolium castaneum]
gi|270013379|gb|EFA09827.1| hypothetical protein TcasGA2_TC011974 [Tribolium castaneum]
Length = 234
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 11/94 (11%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFGPLKSA +HYDRSGRSLGTAD+I+ERR+DAIKAMKQYNGVPLDGR M IQ
Sbjct: 111 IQELFAEFGPLKSASVHYDRSGRSLGTADVIFERRTDAIKAMKQYNGVPLDGRAMNIQ-- 168
Query: 62 ADVSVLENTVPRPVAR--GGRGGASGGYRNGTAP 93
++ + +P PV R G R S R G AP
Sbjct: 169 ----IITSEIPSPVRRPTGERKFQS---RRGAAP 195
>gi|198455576|ref|XP_001360055.2| GA10707 [Drosophila pseudoobscura pseudoobscura]
gi|198133305|gb|EAL29208.2| GA10707 [Drosophila pseudoobscura pseudoobscura]
Length = 284
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 66/78 (84%), Gaps = 5/78 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFGP+K A +HYDRSGRSLGTAD+I+ERR+DA+KA+KQYNGVPLDGRPM IQLA
Sbjct: 138 IKELFNEFGPIKKAAVHYDRSGRSLGTADVIFERRTDALKAIKQYNGVPLDGRPMTIQLA 197
Query: 62 -ADVSVLENTVPRPVARG 78
+DV N + RPVA G
Sbjct: 198 VSDV----NALTRPVASG 211
>gi|195158116|ref|XP_002019940.1| GL12678 [Drosophila persimilis]
gi|194116531|gb|EDW38574.1| GL12678 [Drosophila persimilis]
Length = 284
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 66/78 (84%), Gaps = 5/78 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFGP+K A +HYDRSGRSLGTAD+I+ERR+DA+KA+KQYNGVPLDGRPM IQLA
Sbjct: 138 IKELFNEFGPIKKAAVHYDRSGRSLGTADVIFERRTDALKAIKQYNGVPLDGRPMTIQLA 197
Query: 62 -ADVSVLENTVPRPVARG 78
+DV N + RPVA G
Sbjct: 198 VSDV----NALTRPVASG 211
>gi|21356157|ref|NP_651968.1| RNA and export factor binding protein 1 [Drosophila melanogaster]
gi|5679350|gb|AAD46930.1|AF172637_1 LD24793p [Drosophila melanogaster]
gi|7298863|gb|AAF54070.1| RNA and export factor binding protein 1 [Drosophila melanogaster]
gi|220953584|gb|ACL89335.1| Aly-PA [synthetic construct]
Length = 266
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 13/102 (12%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERR+DA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 125 IKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLA 184
Query: 62 -ADVSVLENTVPRPVARGGRGGASGGYR--NGTAPTYRPRGG 100
+DV+VL RPVA A+ R GTAPT RGG
Sbjct: 185 VSDVAVLT----RPVA------ATDVKRRVGGTAPTSFKRGG 216
>gi|304441001|gb|ADM33940.1| ALY [Bombyx mori]
Length = 254
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 74/100 (74%), Gaps = 9/100 (9%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFG L+SA +HYDRSGRSLGTAD+++ER++DA+KAMKQYNGVPLDGR M IQLA
Sbjct: 116 IKELFSEFGILESASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 175
Query: 62 -ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
++++ L RP AR GGAS G GT RGG
Sbjct: 176 TSEINTL-----RPEARNRIGGASVG---GTIRNNPKRGG 207
>gi|195109702|ref|XP_001999422.1| GI23076 [Drosophila mojavensis]
gi|193916016|gb|EDW14883.1| GI23076 [Drosophila mojavensis]
Length = 277
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERRSDA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 135 IKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRSDALKAIKQYHGVPLDGRPMTIQLA 194
Query: 62 -ADVSVLENTVPRPVARGGRGGASG 85
+DV+ L VP + G A+G
Sbjct: 195 VSDVAALTRPVPSDDVKRRVGNAAG 219
>gi|157108771|ref|XP_001650379.1| RNA and export factor binding protein [Aedes aegypti]
gi|157110681|ref|XP_001651200.1| RNA and export factor binding protein [Aedes aegypti]
gi|108868361|gb|EAT32586.1| AAEL015263-PA [Aedes aegypti]
gi|108879221|gb|EAT43446.1| AAEL005114-PA [Aedes aegypti]
Length = 261
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 57/60 (95%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGPLKSA +HYDRSGRSLGTAD+++ERR+DAIKAMKQYNGVPLDGRPM IQLA
Sbjct: 131 INELFADFGPLKSASVHYDRSGRSLGTADVVFERRADAIKAMKQYNGVPLDGRPMSIQLA 190
>gi|383850832|ref|XP_003700978.1| PREDICTED: THO complex subunit 4-like [Megachile rotundata]
Length = 249
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQYNGVPLDGR M IQ+A
Sbjct: 115 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVA 174
Query: 62 ADVSVLENTVPRPVARGG 79
+ +P RGG
Sbjct: 175 T------SEIPVTSIRGG 186
>gi|328780459|ref|XP_001121250.2| PREDICTED: THO complex subunit 4-like [Apis mellifera]
Length = 249
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQYNGVPLDGR M IQ+A
Sbjct: 114 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVA 173
Query: 62 ADVSVLENTVPRPVARGG 79
+ +P RGG
Sbjct: 174 T------SEIPVTSIRGG 185
>gi|340711000|ref|XP_003394070.1| PREDICTED: THO complex subunit 4-A-like [Bombus terrestris]
Length = 249
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQYNGVPLDGR M IQ+A
Sbjct: 115 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVA 174
Query: 62 ADVSVLENTVPRPVARGG 79
+ +P RGG
Sbjct: 175 T------SEIPVTSIRGG 186
>gi|195391988|ref|XP_002054641.1| GJ22697 [Drosophila virilis]
gi|194152727|gb|EDW68161.1| GJ22697 [Drosophila virilis]
Length = 274
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERRSDA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 132 IKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRSDALKAIKQYHGVPLDGRPMTIQLA 191
Query: 62 -ADVSVLENTVP 72
+DV+ L VP
Sbjct: 192 VSDVAALTRPVP 203
>gi|350400810|ref|XP_003485968.1| PREDICTED: THO complex subunit 4-A-like [Bombus impatiens]
Length = 249
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQYNGVPLDGR M IQ+A
Sbjct: 115 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVA 174
Query: 62 ADVSVLENTVPRPVARGG 79
+ +P RGG
Sbjct: 175 T------SEIPVTSIRGG 186
>gi|380014750|ref|XP_003691382.1| PREDICTED: THO complex subunit 4-like [Apis florea]
Length = 293
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQYNGVPLDGR M IQ+A
Sbjct: 159 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVA 218
Query: 62 ADVSVLENTVPRPVARGG 79
+ +P RGG
Sbjct: 219 T------SEIPVTSIRGG 230
>gi|195498869|ref|XP_002096710.1| aly [Drosophila yakuba]
gi|194182811|gb|EDW96422.1| aly [Drosophila yakuba]
Length = 266
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 66/76 (86%), Gaps = 5/76 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERR+DA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 125 IKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLA 184
Query: 62 -ADVSVLENTVPRPVA 76
+DV+VL RPVA
Sbjct: 185 VSDVAVLT----RPVA 196
>gi|195568864|ref|XP_002102432.1| GD19510 [Drosophila simulans]
gi|194198359|gb|EDX11935.1| GD19510 [Drosophila simulans]
Length = 273
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 77/113 (68%), Gaps = 18/113 (15%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERR+DA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 125 IKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLA 184
Query: 62 -ADVSVLENTV-------------PRPVARGGRGGASGGYRNGTAPTYRPRGG 100
+DV+VL V P P RGG G A G R G RP GG
Sbjct: 185 VSDVAVLTRPVTATDVKRRVGGPAPTPFKRGG-GQAGGPARRG---FKRPVGG 233
>gi|195344125|ref|XP_002038639.1| GM10513 [Drosophila sechellia]
gi|194133660|gb|EDW55176.1| GM10513 [Drosophila sechellia]
Length = 266
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 77/113 (68%), Gaps = 18/113 (15%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERR+DA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 125 IKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLA 184
Query: 62 -ADVSVLENTV-------------PRPVARGGRGGASGGYRNGTAPTYRPRGG 100
+DV+VL V P P RGG G A G R G RP GG
Sbjct: 185 VSDVAVLTRPVTATDVKRRVGGPAPTPFKRGG-GQAGGPARRG---FKRPVGG 233
>gi|289740255|gb|ADD18875.1| RRM motif-containing protein [Glossina morsitans morsitans]
Length = 249
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 57/65 (87%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFGPLK A +HYDRSGRSLGTAD+++ERRSDA+KA+KQYNGVPLDGRPM IQ
Sbjct: 116 IKELFTEFGPLKKAAVHYDRSGRSLGTADVVFERRSDALKAIKQYNGVPLDGRPMNIQFL 175
Query: 62 ADVSV 66
A+ V
Sbjct: 176 ANPEV 180
>gi|194899179|ref|XP_001979138.1| GG10124 [Drosophila erecta]
gi|190650841|gb|EDV48096.1| GG10124 [Drosophila erecta]
Length = 266
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERR+DA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 125 IKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLA 184
Query: 62 -ADVSVLENTV 71
+DV+VL V
Sbjct: 185 VSDVAVLTRPV 195
>gi|38048103|gb|AAR09954.1| similar to Drosophila melanogaster aly, partial [Drosophila
yakuba]
Length = 164
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 66/76 (86%), Gaps = 5/76 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERR+DA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 23 IKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLA 82
Query: 62 -ADVSVLENTVPRPVA 76
+DV+VL RPVA
Sbjct: 83 VSDVAVLT----RPVA 94
>gi|195036702|ref|XP_001989807.1| GH18594 [Drosophila grimshawi]
gi|193894003|gb|EDV92869.1| GH18594 [Drosophila grimshawi]
Length = 274
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERRSDA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 130 IKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRSDALKAIKQYHGVPLDGRPMTIQLA 189
Query: 62 -ADVSVLENTVP 72
+DV+ L +P
Sbjct: 190 VSDVAALTRPLP 201
>gi|432119105|gb|ELK38325.1| THO complex subunit 4 [Myotis davidii]
Length = 153
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 8/89 (8%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 22 ELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL--- 78
Query: 64 VSVLENTVPRPVARGGRGG-----ASGGY 87
V+ +T RPV RGG SGG+
Sbjct: 79 VTSQIDTQRRPVQSANRGGMTRTRGSGGF 107
>gi|240849363|ref|NP_001155655.1| THO complex subunit 4 [Acyrthosiphon pisum]
gi|239788274|dbj|BAH70825.1| ACYPI006176 [Acyrthosiphon pisum]
Length = 265
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%), Gaps = 8/95 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF EFGPLK+A +HYDRSGRSLGTAD++++ ++ A+KA++QYN VPLDGRPM+I+LA
Sbjct: 123 IQELFDEFGPLKTATVHYDRSGRSLGTADVVFDSKNAALKAVRQYNNVPLDGRPMKIELA 182
Query: 62 ADVSVLENTVPR-------PVARGGRGGASGGYRN 89
D+S + N R PV RG RGG G N
Sbjct: 183 TDLSTVANLATRLSRPAQLPV-RGTRGGVRGNRGN 216
>gi|307180346|gb|EFN68372.1| THO complex subunit 4 [Camponotus floridanus]
Length = 247
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQY+GVPLDGR M IQ+A
Sbjct: 112 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVA 171
Query: 62 ADVSVLENTVPRPVARGG 79
+ +P RGG
Sbjct: 172 T------SELPVTSVRGG 183
>gi|195454362|ref|XP_002074207.1| GK12741 [Drosophila willistoni]
gi|194170292|gb|EDW85193.1| GK12741 [Drosophila willistoni]
Length = 280
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERRSDA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 137 IKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRSDALKAIKQYHGVPLDGRPMTIQLA 196
Query: 62 -ADVSVLENTV 71
+DV+ L V
Sbjct: 197 VSDVTALTRPV 207
>gi|321472744|gb|EFX83713.1| hypothetical protein DAPPUDRAFT_301602 [Daphnia pulex]
Length = 250
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF EFGPLK A +HYDRSGRSLGTAD+++ERR DA+KAMKQYNGVPLDGR M IQ+A
Sbjct: 113 IKELFMEFGPLKHASVHYDRSGRSLGTADVVFERRLDAVKAMKQYNGVPLDGRSMVIQMA 172
Query: 62 -ADVSVLENTVPRPVARGGRG 81
+D++ + N + P A G
Sbjct: 173 TSDLNTIANRLTSPRANTNNG 193
>gi|322793642|gb|EFZ17092.1| hypothetical protein SINV_14629 [Solenopsis invicta]
Length = 256
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQY+GVPLDGR M IQ+A
Sbjct: 121 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVA 180
Query: 62 ADVSVLENTVPRPVARGG 79
+ +P RGG
Sbjct: 181 T------SELPVTSVRGG 192
>gi|307200277|gb|EFN80545.1| THO complex subunit 4 [Harpegnathos saltator]
Length = 248
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 56/60 (93%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQY+GVPLDGR M IQ+A
Sbjct: 114 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVA 173
>gi|332016673|gb|EGI57527.1| RNA and export factor-binding protein 2 [Acromyrmex echinatior]
Length = 250
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 56/60 (93%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLKSA +HYDRSGRSLG+AD+I+ERR+DAIKAMKQY+GVPLDGR M IQ+A
Sbjct: 116 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVA 175
>gi|395826774|ref|XP_003786590.1| PREDICTED: THO complex subunit 4 [Otolemur garnettii]
Length = 181
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 48 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 106
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 107 --VTSQIDTQRRPTQSVNRGGMT 127
>gi|193788709|ref|NP_001123294.1| THO complex 4 [Nasonia vitripennis]
Length = 270
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 55/60 (91%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFGPLK A +HYDRSGRS+G+ADL++ERR+DAIKAMKQYNGVPLDGR M IQLA
Sbjct: 121 ILELFSEFGPLKHAGVHYDRSGRSIGSADLLFERRADAIKAMKQYNGVPLDGREMNIQLA 180
>gi|194741450|ref|XP_001953202.1| GF17326 [Drosophila ananassae]
gi|190626261|gb|EDV41785.1| GF17326 [Drosophila ananassae]
Length = 275
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 72/95 (75%), Gaps = 10/95 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FGP+K A +HYDRSGRSLGTAD+I+ERR DA+KA+KQY+GVPLDGRPM IQLA
Sbjct: 129 IKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRGDALKAIKQYHGVPLDGRPMTIQLA 188
Query: 62 -ADVSVLENTVPRPVA-----RGGRGGASGGYRNG 90
+DV+ L RPVA R GGAS ++ G
Sbjct: 189 VSDVASLS----RPVAAVDVKRRVGGGASAPFKRG 219
>gi|7159943|emb|CAB76383.1| RNA and export factor binding protein 1-II [Mus musculus]
Length = 163
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 29 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 87
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 88 --VTSQIDTQRRPAQSINRGGMT 108
>gi|357619208|gb|EHJ71878.1| ALY [Danaus plexippus]
Length = 253
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFG LKSA +HYDRSGRSLGTAD+++ERR+DA+KAMKQYNGVPLDGR M IQLA
Sbjct: 113 IQELFSEFGILKSAAVHYDRSGRSLGTADVLFERRADALKAMKQYNGVPLDGRAMNIQLA 172
Query: 62 -ADVSVLEN 69
+++S N
Sbjct: 173 TSEISTFRN 181
>gi|326930798|ref|XP_003211528.1| PREDICTED: THO complex subunit 4-like, partial [Meleagris
gallopavo]
Length = 160
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 25 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 83
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 84 --VTSQIDTQRRPAQSVNRGGMT 104
>gi|355724133|gb|AES08120.1| THO complex subunit 4 [Mustela putorius furo]
Length = 178
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 43 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 101
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 102 --VTSQIDTQRRPTQSVNRGGMT 122
>gi|427781753|gb|JAA56328.1| Putative tho complex subunit 4 [Rhipicephalus pulchellus]
Length = 251
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 55/59 (93%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+EFGPL+ A +HYDRSGRSLGTAD+++ERR+DA++AMKQYNGVPLDGRPM IQL
Sbjct: 123 IKELFAEFGPLRKAAVHYDRSGRSLGTADVVFERRTDAVRAMKQYNGVPLDGRPMNIQL 181
>gi|383414995|gb|AFH30711.1| THO complex subunit 4 [Macaca mulatta]
Length = 261
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 129 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 187
Query: 62 ADVSVLENTVPRPVARGG 79
V+ +T RP RGG
Sbjct: 188 --VTSQIDTQRRPAQRGG 203
>gi|354469136|ref|XP_003496986.1| PREDICTED: THO complex subunit 4-like [Cricetulus griseus]
Length = 212
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 78 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 136
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 137 --VTSQIDTQRRPAQSINRGGMT 157
>gi|355754465|gb|EHH58430.1| hypothetical protein EGM_08282, partial [Macaca fascicularis]
Length = 178
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 46 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 104
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 105 --VTSQIDTQRRPAQSVNRGGMT 125
>gi|355569026|gb|EHH25307.1| hypothetical protein EGK_09105, partial [Macaca mulatta]
Length = 178
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 46 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 104
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 105 --VTSQIDTQRRPAQSVNRGGMT 125
>gi|301754193|ref|XP_002912986.1| PREDICTED: THO complex subunit 4-like [Ailuropoda melanoleuca]
Length = 239
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 105 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 163
Query: 62 ADVSVLENTVPRPVARGGRGG 82
V+ +T RP RGG
Sbjct: 164 --VTSQIDTQRRPAQSVNRGG 182
>gi|281348647|gb|EFB24231.1| hypothetical protein PANDA_000701 [Ailuropoda melanoleuca]
Length = 175
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 44 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 102
Query: 62 ADVSVLENTVPRPVARGGRGG 82
V+ +T RP RGG
Sbjct: 103 --VTSQIDTQRRPAQSVNRGG 121
>gi|346466955|gb|AEO33322.1| hypothetical protein [Amblyomma maculatum]
Length = 202
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 55/59 (93%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+EFGPL+ A +HYDRSGRSLGTAD+++ERR+DA++AMKQYNGVPLDGRPM IQL
Sbjct: 70 IKELFAEFGPLRKAAVHYDRSGRSLGTADVVFERRTDAVRAMKQYNGVPLDGRPMNIQL 128
>gi|440897688|gb|ELR49328.1| THO complex subunit 4, partial [Bos grunniens mutus]
Length = 178
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 46 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 104
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 105 --VTSQIDTQRRPAQSVNRGGMT 125
>gi|403280751|ref|XP_003945202.1| PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 4 [Saimiri
boliviensis boliviensis]
Length = 230
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 95 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 153
Query: 62 ADVSVLENTVPRPVARGGRGG 82
V+ +T RP RGG
Sbjct: 154 --VTSQIDTQRRPAQSVNRGG 172
>gi|149055045|gb|EDM06862.1| rCG32827, isoform CRA_b [Rattus norvegicus]
Length = 256
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 122 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 180
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 181 --VTSQIDTQRRPAQSINRGGMT 201
>gi|363740921|ref|XP_001232393.2| PREDICTED: THO complex subunit 4 [Gallus gallus]
Length = 255
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 120 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 178
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 179 --VTSQIDTQRRPAQSVNRGGMT 199
>gi|344250156|gb|EGW06260.1| THO complex subunit 4 [Cricetulus griseus]
Length = 187
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 46 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 104
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 105 --VTSQIDTQRRPAQSINRGGMT 125
>gi|6755763|ref|NP_035698.1| THO complex subunit 4 [Mus musculus]
gi|48474242|sp|O08583.3|THOC4_MOUSE RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=REF1-I; AltName: Full=RNA and export
factor-binding protein 1; AltName: Full=Transcriptional
coactivator Aly/REF
gi|1916290|gb|AAC53117.1| ALY [Mus musculus]
gi|111307348|gb|AAI20589.1| THO complex 4 [Mus musculus]
gi|148702823|gb|EDL34770.1| THO complex 4 [Mus musculus]
gi|187957054|gb|AAI37659.1| THO complex 4 [Mus musculus]
Length = 255
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 121 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 179
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 180 --VTSQIDTQRRPAQSINRGGMT 200
>gi|78369418|ref|NP_001030494.1| THO complex subunit 4 [Bos taurus]
gi|122145089|sp|Q3T0I4.1|THOC4_BOVIN RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=Transcriptional coactivator Aly/REF;
AltName: Full=bZIP-enhancing factor BEF
gi|74267952|gb|AAI02385.1| THO complex 4 [Bos taurus]
gi|296476142|tpg|DAA18257.1| TPA: THO complex subunit 4 [Bos taurus]
Length = 257
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 122 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 180
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 181 --VTSQIDTQRRPAQSVNRGGMT 201
>gi|251765071|sp|B5FXN8.1|THOC4_TAEGU RecName: Full=THO complex subunit 4; Short=Tho4; AltName:
Full=Aly/REF export factor
gi|197127301|gb|ACH43799.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127302|gb|ACH43800.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127303|gb|ACH43801.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127304|gb|ACH43802.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127306|gb|ACH43804.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 119 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 177
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 178 --VTSQIDTQRRPAQSVNRGGMT 198
>gi|432868529|ref|XP_004071583.1| PREDICTED: THO complex subunit 4-A-like [Oryzias latipes]
Length = 268
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ERR+DA+KAMKQYNG+PLDGRPM IQL
Sbjct: 132 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLDGRPMNIQL- 190
Query: 62 ADVSVLENTVPRPVARGGRGG 82
V+ +T RP+ RGG
Sbjct: 191 --VTSQIDTQRRPMQGMNRGG 209
>gi|332266437|ref|XP_003282213.1| PREDICTED: THO complex subunit 4 isoform 1 [Nomascus leucogenys]
gi|426346309|ref|XP_004040822.1| PREDICTED: THO complex subunit 4 [Gorilla gorilla gorilla]
gi|441676608|ref|XP_004092687.1| PREDICTED: THO complex subunit 4 isoform 2 [Nomascus leucogenys]
gi|410305978|gb|JAA31589.1| THO complex 4 [Pan troglodytes]
Length = 264
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 129 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 187
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 188 --VTSQIDTQRRPAQSVNRGGMT 208
>gi|386781883|ref|NP_001247942.1| Aly/REF export factor [Macaca mulatta]
gi|402901381|ref|XP_003913629.1| PREDICTED: THO complex subunit 4 [Papio anubis]
gi|383414993|gb|AFH30710.1| THO complex subunit 4 [Macaca mulatta]
Length = 264
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 129 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 187
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 188 --VTSQIDTQRRPAQSVNRGGMT 208
>gi|297702053|ref|XP_002828006.1| PREDICTED: THO complex subunit 4 [Pongo abelii]
Length = 264
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 129 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 187
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 188 --VTSQIDTQRRPAQSVNRGGMT 208
>gi|197127309|gb|ACH43807.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127310|gb|ACH43808.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 119 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 177
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 178 --VTSQIDTQRRPAQSVNRGGMT 198
>gi|350538663|ref|NP_001232343.1| THO complex subunit 4 [Taeniopygia guttata]
gi|197127307|gb|ACH43805.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 119 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 177
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 178 --VTSQIDTQRRPAQSVNRGGMT 198
>gi|449275081|gb|EMC84066.1| THO complex subunit 4, partial [Columba livia]
Length = 134
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 2 ELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL--- 58
Query: 64 VSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 59 VTSQIDTQRRPAQSVNRGGMT 79
>gi|197127308|gb|ACH43806.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 119 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 177
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 178 --VTSQIDTQRRPAQSVNRGGMT 198
>gi|431908644|gb|ELK12236.1| Rho GDP-dissociation inhibitor 1, partial [Pteropus alecto]
Length = 413
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 43 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 101
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 102 --VTSQIDTQRRPAQSVSRGGMT 122
>gi|332849328|ref|XP_001165277.2| PREDICTED: THO complex subunit 4 [Pan troglodytes]
Length = 264
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 129 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 187
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 188 --VTSQIDTQRRPAQSVNRGGMT 208
>gi|410982020|ref|XP_003997362.1| PREDICTED: THO complex subunit 4 [Felis catus]
Length = 220
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 85 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 143
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP RGG +
Sbjct: 144 --VTSQIDTQRRPAQSVNRGGMT 164
>gi|147898399|ref|NP_001089314.1| THO complex subunit 4-A [Xenopus laevis]
gi|82230182|sp|Q58EA2.1|THO4A_XENLA RecName: Full=THO complex subunit 4-A; Short=Tho4-A; AltName:
Full=Aly/REF export factor-A
gi|61403478|gb|AAH92013.1| MGC84954 protein [Xenopus laevis]
Length = 256
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 66/99 (66%), Gaps = 13/99 (13%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 122 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 180
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
V+ RP+ RGG RPRGG
Sbjct: 181 --VTSQIEAQRRPIQSQSRGGG----------VTRPRGG 207
>gi|410902089|ref|XP_003964527.1| PREDICTED: THO complex subunit 4-A-like [Takifugu rubripes]
Length = 265
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 69/94 (73%), Gaps = 10/94 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ERR+DA+KAMKQYNG+PLDGRPM IQL
Sbjct: 129 IQELFAEFGILKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLDGRPMNIQL- 187
Query: 62 ADVSVLENTVPRPV-ARGG------RGGASGGYR 88
V+ +T RP+ RGG RGG GG +
Sbjct: 188 --VTSQIDTQRRPMQGRGGGTMNRIRGGGFGGMQ 219
>gi|351706421|gb|EHB09340.1| THO complex subunit 4 [Heterocephalus glaber]
Length = 209
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 74 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 132
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ T RP RGG +
Sbjct: 133 --VTSQIETQRRPAPSINRGGMT 153
>gi|334322981|ref|XP_001370691.2| PREDICTED: THO complex subunit 4-like [Monodelphis domestica]
Length = 459
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 324 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 382
Query: 62 ADVSVLENTVPRPVARGGRGG 82
V+ +T RP RGG
Sbjct: 383 --VTSQIDTQRRPAQSVNRGG 401
>gi|62857865|ref|NP_001017027.1| THO complex subunit 4 [Xenopus (Silurana) tropicalis]
gi|123915952|sp|Q28FB9.1|THOC4_XENTR RecName: Full=THO complex subunit 4; Short=Tho4; AltName:
Full=Aly/REF export factor
gi|89269092|emb|CAJ81934.1| THO complex 4 [Xenopus (Silurana) tropicalis]
gi|138519928|gb|AAI35843.1| hypothetical protein LOC549781 [Xenopus (Silurana) tropicalis]
Length = 260
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 66/99 (66%), Gaps = 13/99 (13%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 125 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 183
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
V+ RP+ RGG RPRGG
Sbjct: 184 --VTSQIEAQRRPIQSQSRGGG----------ITRPRGG 210
>gi|348558286|ref|XP_003464949.1| PREDICTED: THO complex subunit 4-like [Cavia porcellus]
Length = 364
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 230 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 288
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ T RP RGG +
Sbjct: 289 --VTSQIETQRRPAQSVNRGGMT 309
>gi|395533243|ref|XP_003768670.1| PREDICTED: uncharacterized protein LOC100925707 [Sarcophilus
harrisii]
Length = 372
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 237 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 295
Query: 62 ADVSVLENTVPRPVARGGRGG 82
V+ +T RP RGG
Sbjct: 296 --VTSQIDTQRRPAQSVNRGG 314
>gi|241152158|ref|XP_002406835.1| THO complex subunit, putative [Ixodes scapularis]
gi|215493941|gb|EEC03582.1| THO complex subunit, putative [Ixodes scapularis]
Length = 327
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 55/61 (90%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFGPL+ A +HYDRSGRSLGTAD+++ERR+D+++AMKQYNGVPLDGRPM IQL
Sbjct: 192 IKELFAEFGPLRKAAVHYDRSGRSLGTADVVFERRTDSVRAMKQYNGVPLDGRPMNIQLV 251
Query: 62 A 62
Sbjct: 252 T 252
>gi|387019131|gb|AFJ51683.1| THO complex subunit 4 [Crotalus adamanteus]
Length = 253
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYN VPLDGRPM IQL
Sbjct: 120 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNCVPLDGRPMNIQL- 178
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ +T RP+ RGG +
Sbjct: 179 --VTSQIDTQRRPIQSVNRGGMT 199
>gi|119610105|gb|EAW89699.1| THO complex 4 [Homo sapiens]
Length = 239
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 104 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 162
Query: 62 ADVSVLENTVPRPVARGGRGG 82
V+ + RP RGG
Sbjct: 163 --VTSQIDAQRRPAQSVNRGG 181
>gi|221221906|gb|ACM09614.1| THO complex subunit 4 [Salmo salar]
Length = 263
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 4/90 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 129 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 187
Query: 62 ADVSVLENTVPRPVARG-GRGGASGGYRNG 90
V+ +T RP +G RGG R G
Sbjct: 188 --VTSQIDTQRRPPMQGMNRGGGMNRARGG 215
>gi|238776833|ref|NP_005773.3| THO complex subunit 4 [Homo sapiens]
Length = 264
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 129 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 187
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP RGG +
Sbjct: 188 --VTSQIDAQRRPAQSVNRGGMT 208
>gi|48429165|sp|Q86V81.3|THOC4_HUMAN RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=Transcriptional coactivator Aly/REF;
AltName: Full=bZIP-enhancing factor BEF
gi|30411083|gb|AAH52302.1| THO complex 4 [Homo sapiens]
gi|190689331|gb|ACE86440.1| THO complex 4 protein [synthetic construct]
gi|190690681|gb|ACE87115.1| THO complex 4 protein [synthetic construct]
Length = 257
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 122 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 180
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP RGG +
Sbjct: 181 --VTSQIDAQRRPAQSVNRGGMT 201
>gi|221222184|gb|ACM09753.1| THO complex subunit 4 [Salmo salar]
Length = 214
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 4/90 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 80 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 138
Query: 62 ADVSVLENTVPRPVARG-GRGGASGGYRNG 90
V+ +T RP +G RGG R G
Sbjct: 139 --VTSQIDTQRRPPMQGMNRGGGMNRARGG 166
>gi|47219626|emb|CAG02671.1| unnamed protein product [Tetraodon nigroviridis]
Length = 265
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ERR DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 130 IQELFAEFGILKKAAVHYDRSGRSLGTADVHFERRVDALKAMKQYNGVPLDGRPMNIQL- 188
Query: 62 ADVSVLENTVPRPVARGG 79
V+ +T RP+ GG
Sbjct: 189 --VTSQIDTQRRPMQGGG 204
>gi|194216535|ref|XP_001489489.2| PREDICTED: THO complex subunit 4-like [Equus caballus]
Length = 207
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 72 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 130
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP RGG +
Sbjct: 131 --VTSQIDPQRRPAQSVNRGGMT 151
>gi|391343173|ref|XP_003745887.1| PREDICTED: RNA and export factor-binding protein 2-like
[Metaseiulus occidentalis]
Length = 257
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 56/65 (86%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+I+ERR+DA++AMKQYN VPLDGRPM+I++
Sbjct: 115 IRELFNEFGALKKAAVHYDRSGRSLGTADVIFERRTDALRAMKQYNDVPLDGRPMKIEIV 174
Query: 62 ADVSV 66
D V
Sbjct: 175 IDKPV 179
>gi|242003936|ref|XP_002422915.1| THO complex subunit, putative [Pediculus humanus corporis]
gi|212505808|gb|EEB10177.1| THO complex subunit, putative [Pediculus humanus corporis]
Length = 315
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 52/59 (88%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF+EFGPLKSA +HYDRSGRSLGTAD+I+ RR DAIKAM QYN VPLDGRPM IQL
Sbjct: 181 VTELFAEFGPLKSAAVHYDRSGRSLGTADVIFLRREDAIKAMMQYNSVPLDGRPMNIQL 239
>gi|348533153|ref|XP_003454070.1| PREDICTED: THO complex subunit 4-like [Oreochromis niloticus]
Length = 278
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 3/74 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ERR+DA+KAMKQYNG+PLDGRPM IQL
Sbjct: 134 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLDGRPMNIQL- 192
Query: 62 ADVSVLENTVPRPV 75
V+ +T RP+
Sbjct: 193 --VTSQIDTQRRPM 204
>gi|443688940|gb|ELT91463.1| hypothetical protein CAPTEDRAFT_161051 [Capitella teleta]
Length = 161
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 55/62 (88%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRS+GTA++I+E RSDA+KAMKQYN VPLDGRPM+IQL
Sbjct: 23 IRELFAEFGHLKKAAIHYDRSGRSIGTAEIIFELRSDAVKAMKQYNNVPLDGRPMKIQLV 82
Query: 62 AD 63
+D
Sbjct: 83 SD 84
>gi|157311703|ref|NP_001098578.1| THO complex subunit 4 [Danio rerio]
gi|156230508|gb|AAI51965.1| Zgc:171753 protein [Danio rerio]
Length = 280
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 141 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 200
Query: 62 -ADVSVLENTVPRPVARGGRG 81
+ + T + + RGG G
Sbjct: 201 TSQIDAQRRTPMQGLNRGGGG 221
>gi|291223306|ref|XP_002731646.1| PREDICTED: THO complex 4-like [Saccoglossus kowalevskii]
Length = 265
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 57/73 (78%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FG LK A +HYDRSGRSLGTAD+I+E+++DAIKAMKQYN VPLDGR M IQL
Sbjct: 122 IQELFADFGNLKRAAVHYDRSGRSLGTADVIFEKKNDAIKAMKQYNNVPLDGRAMNIQLV 181
Query: 62 ADVSVLENTVPRP 74
+ +E RP
Sbjct: 182 TSATEVEQFQRRP 194
>gi|209733738|gb|ACI67738.1| THO complex subunit 4 [Salmo salar]
gi|303667317|gb|ADM16268.1| THO complex subunit 4 [Salmo salar]
Length = 267
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 133 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL- 191
Query: 62 ADVSVLENTVPRPVARG 78
V+ +T RP +G
Sbjct: 192 --VTSQIDTQRRPPMQG 206
>gi|34810642|pdb|1NO8|A Chain A, Solution Structure Of The Nuclear Factor Aly Rbd Domain
Length = 106
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 53/60 (88%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL
Sbjct: 45 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 104
>gi|148223950|ref|NP_001086215.1| THO complex subunit 4-B [Xenopus laevis]
gi|82236414|sp|Q6GLW1.1|THO4B_XENLA RecName: Full=THO complex subunit 4-B; Short=Tho4-B; AltName:
Full=Aly/REF export factor-B
gi|49257659|gb|AAH74336.1| MGC84169 protein [Xenopus laevis]
Length = 256
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGR M IQL
Sbjct: 121 IQELFAEFGSLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRSMNIQL- 179
Query: 62 ADVSVLENTVPRPVARGGRGG 82
V+ RP+ RGG
Sbjct: 180 --VTSQIEAQRRPIQSQSRGG 198
>gi|148238335|ref|NP_062357.3| RNA and export factor-binding protein 2 [Mus musculus]
gi|148707130|gb|EDL39077.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A + YDRSGRSLGTAD+ +ERR+DA+KAMKQY GVPLDGRPM IQL
Sbjct: 91 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQL- 149
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP G RGG +
Sbjct: 150 --VTSQIDPQRRPAQSGNRGGMT 170
>gi|68534069|gb|AAH99405.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A + YDRSGRSLGTAD+ +ERR+DA+KAMKQY GVPLDGRPM IQL
Sbjct: 91 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQL- 149
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP G RGG +
Sbjct: 150 --VTSQIDPQRRPAQSGNRGGMT 170
>gi|26339222|dbj|BAC33282.1| unnamed protein product [Mus musculus]
Length = 218
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A + YDRSGRSLGTAD+ +ERR+DA+KAMKQY GVPLDGRPM IQL
Sbjct: 91 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQL- 149
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP G RGG +
Sbjct: 150 --VTSQIDPQRRPAQSGNRGGMT 170
>gi|48474967|sp|Q9JJW6.1|REFP2_MOUSE RecName: Full=RNA and export factor-binding protein 2
gi|7159945|emb|CAB76384.1| RNA and export factor binding protein 2-I [Mus musculus]
Length = 218
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A + YDRSGRSLGTAD+ +ERR+DA+KAMKQY GVPLDGRPM IQL
Sbjct: 91 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQL- 149
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP G RGG +
Sbjct: 150 --VASQIDPQRRPAQSGNRGGMT 170
>gi|300085579|gb|ADJ67482.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A + YDRSGRSLGTAD+ +ERR+DA+KAMKQY GVPLDGRPM IQL
Sbjct: 91 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQL- 149
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP G RGG +
Sbjct: 150 --VASQIDPQRRPAQSGNRGGMT 170
>gi|2896146|gb|AAD09608.1| transcriptional coactivator ALY, partial [Homo sapiens]
Length = 233
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTA++ +ER++DA+KAMKQYNG PLDGRPM IQL
Sbjct: 98 IQELFAEFGTLKKAAVHYDRSGRSLGTANVHFERKADALKAMKQYNGFPLDGRPMNIQL- 156
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP RGG +
Sbjct: 157 --VTSQIDAQRRPAQSVNRGGMT 177
>gi|260801421|ref|XP_002595594.1| hypothetical protein BRAFLDRAFT_200539 [Branchiostoma floridae]
gi|229280841|gb|EEN51606.1| hypothetical protein BRAFLDRAFT_200539 [Branchiostoma floridae]
Length = 236
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 53/59 (89%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+EFG LK A +HYDRSGRSLGTAD+++E+R+DA++AMKQYNGVPLDGR M IQL
Sbjct: 99 IKELFAEFGNLKKAAVHYDRSGRSLGTADVVFEKRADAMRAMKQYNGVPLDGRSMNIQL 157
>gi|390980746|pdb|2YKA|A Chain A, Rrm Domain Of Mrna Export Adaptor Ref2-I Bound To Hvs
Orf57 Peptide
Length = 124
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A + YDRSGRSLGTAD+ +ERR+DA+KAMKQY GVPLDGRPM IQL
Sbjct: 52 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLV 111
Query: 62 ADVSVLE 68
A LE
Sbjct: 112 ASQIDLE 118
>gi|317454987|pdb|2KT5|A Chain A, Rrm Domain Of Mrna Export Adaptor Ref2-I Bound To Hsv-1
Icp27 Peptide
Length = 124
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A + YDRSGRSLGTAD+ +ERR+DA+KAMKQY GVPLDGRPM IQL
Sbjct: 52 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLV 111
Query: 62 ADVSVLE 68
A LE
Sbjct: 112 ASQIDLE 118
>gi|118137707|pdb|2F3J|A Chain A, The Solution Structure Of The Ref2-I Mrna Export Factor
(Residues 1-155)
Length = 177
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A + YDRSGRSLGTAD+ +ERR+DA+KAMKQY GVPLDGRPM IQL
Sbjct: 105 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLV 164
Query: 62 ADVSVLE 68
A LE
Sbjct: 165 ASQIDLE 171
>gi|405969437|gb|EKC34408.1| THO complex subunit 4-A [Crassostrea gigas]
Length = 305
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 51/59 (86%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+EFGPLK A +HYD+SGRS+GTA++++ERR DA KAM QYN VPLDGRPM IQL
Sbjct: 130 IQELFAEFGPLKMAAVHYDKSGRSIGTAEVVFERRLDAQKAMTQYNNVPLDGRPMNIQL 188
>gi|115653040|ref|XP_782040.2| PREDICTED: THO complex subunit 4-A-like [Strongylocentrotus
purpuratus]
Length = 304
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 3/74 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++FG LK A +HYDR+GRSLGTAD+++ERR DA+KA+KQYN VPLDGR M IQL
Sbjct: 136 IEELFADFGSLKKAAVHYDRTGRSLGTADVVFERRVDAMKAIKQYNQVPLDGRAMNIQLV 195
Query: 62 ADVSVLENTVPRPV 75
A + ++ P P+
Sbjct: 196 ASANEID---PSPM 206
>gi|47223958|emb|CAG06135.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 52/58 (89%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ ELF+EFGPLK A +HYDRSGRS GTAD+ ++ ++DAIKAMKQYNGVPLDG+PM+IQ
Sbjct: 108 LRELFAEFGPLKEASIHYDRSGRSKGTADVHFQHKADAIKAMKQYNGVPLDGQPMKIQ 165
>gi|359546173|pdb|3ULH|A Chain A, Crystal Structure Of A Rna Binding Domain Of Tho Complex
Subunit 4 Protein (Thoc4) From Homo Sapiens At 2.54 A
Resolution
Length = 107
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KA KQYNGVPLDGRP IQL
Sbjct: 46 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAXKQYNGVPLDGRPXNIQLV 105
>gi|256051723|ref|XP_002569569.1| RNA and export factor binding protein [Schistosoma mansoni]
Length = 251
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFG LK+A +HYD SGRSLGTA + + +++DA+KAMKQY+GVPLDGRPM IQL
Sbjct: 117 IQELFSEFGTLKTAAVHYDCSGRSLGTAHVHFLQKADALKAMKQYDGVPLDGRPMNIQL- 175
Query: 62 ADVSVLENTVPRPVARGGRG 81
VS ++ +P R RG
Sbjct: 176 --VSSQTDSQGKPAQRINRG 193
>gi|410917420|ref|XP_003972184.1| PREDICTED: RNA and export factor-binding protein 2-like [Takifugu
rubripes]
Length = 232
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 51/58 (87%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ ELF+EFGPLK A +HYDRSGRS GTAD+ +E ++DA+KA+KQYNGVPLDG PM+IQ
Sbjct: 108 LRELFAEFGPLKEASVHYDRSGRSKGTADVHFELKADALKALKQYNGVPLDGHPMKIQ 165
>gi|340371931|ref|XP_003384498.1| PREDICTED: THO complex subunit 4-like [Amphimedon queenslandica]
Length = 246
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 51/59 (86%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF EFG L+ A++HYD+SGRS+GTA +I+ER DA+KA+KQYNGVPLDGRPM IQL
Sbjct: 109 IKELFREFGRLRKAEVHYDKSGRSVGTAQVIFERNVDALKAVKQYNGVPLDGRPMSIQL 167
>gi|395512140|ref|XP_003760302.1| PREDICTED: RNA and export factor-binding protein 2-like
[Sarcophilus harrisii]
Length = 363
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 7/86 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+ G LK A LHYDRSGRSLGTAD+ +ER++DA+KAMK+Y+GV LD RPM IQL
Sbjct: 232 IQELFAACGTLKKAALHYDRSGRSLGTADVHFERKADALKAMKRYHGVTLDDRPMNIQL- 290
Query: 62 ADVSVLENTVP--RPVARGGRGGASG 85
VL T RP G RGG +G
Sbjct: 291 ----VLPQTRAQRRPAQSGKRGGMTG 312
>gi|209736566|gb|ACI69152.1| THO complex subunit 4 [Salmo salar]
gi|223647606|gb|ACN10561.1| THO complex subunit 4 [Salmo salar]
Length = 272
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 49/58 (84%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
I ELF+EFG LK A +HYDRSGRS GTAD+ +ERR+DA+KAMKQYN VPLDGR M IQ
Sbjct: 130 IQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLDGRAMSIQ 187
>gi|223646706|gb|ACN10111.1| THO complex subunit 4 [Salmo salar]
gi|223672557|gb|ACN12460.1| THO complex subunit 4 [Salmo salar]
Length = 242
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 49/58 (84%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
I ELF+EFG LK A +HYDRSGRS GTAD+ +ERR+DA+KAMKQYN VPLDGR M IQ
Sbjct: 131 IQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLDGRAMSIQ 188
>gi|348521070|ref|XP_003448049.1| PREDICTED: THO complex subunit 4-like [Oreochromis niloticus]
Length = 258
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+EFG LK A +HYDRSGRS GTAD+ + ++DA+KAMK YNGVPLDGRPM+IQ A
Sbjct: 119 IRELFAEFGALKKASIHYDRSGRSKGTADVHFVNKADALKAMKHYNGVPLDGRPMKIQQA 178
Query: 62 A---DVSVLENT 70
D +NT
Sbjct: 179 TSEFDTQNRQNT 190
>gi|309264066|ref|XP_003086200.1| PREDICTED: RNA and export factor-binding protein 2-like [Mus
musculus]
Length = 193
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 6/92 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I +LFSEFG L+ +HYD SGRSLGTA + +ER++DA+KAM+QYNG+PLDGRPM IQL
Sbjct: 102 IRKLFSEFGTLRKYAVHYDGSGRSLGTAHVHFERKADALKAMRQYNGIPLDGRPMNIQLV 161
Query: 62 ADVSVL-----ENTVPRPVARG-GRGGASGGY 87
+ + +N + R G GG SGG+
Sbjct: 162 TSQTDIQRRPAQNRNRDTITRNPGSGGFSGGW 193
>gi|407262786|ref|XP_003945361.1| PREDICTED: RNA and export factor-binding protein 2-like [Mus
musculus]
Length = 184
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 6/92 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I +LFSEFG L+ +HYD SGRSLGTA + +ER++DA+KAM+QYNG+PLDGRPM IQL
Sbjct: 93 IRKLFSEFGTLRKYAVHYDGSGRSLGTAHVHFERKADALKAMRQYNGIPLDGRPMNIQLV 152
Query: 62 ADVSVL-----ENTVPRPVARG-GRGGASGGY 87
+ + +N + R G GG SGG+
Sbjct: 153 TSQTDIQRRPAQNRNRDTITRNPGSGGFSGGW 184
>gi|397174787|ref|NP_001257571.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|397174792|ref|NP_001257573.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923570|ref|NP_001257827.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923572|ref|NP_001257828.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923574|ref|NP_001257829.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923576|ref|NP_001257830.1| RNA and export factor-binding protein 2-like [Mus musculus]
Length = 264
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM IQLA
Sbjct: 102 IQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLA 161
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
S ++ RP RGG +
Sbjct: 162 --TSQIDRQ-GRPAQSKNRGGMT 181
>gi|294712530|ref|NP_001171006.1| RNA and export factor-binding protein 2-like [Mus musculus]
Length = 268
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM IQLA
Sbjct: 102 IQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLA 161
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
S ++ RP RGG +
Sbjct: 162 --TSQIDRQ-GRPAQSKNRGGMT 181
>gi|223462021|gb|AAI47567.1| Unknown (protein for MGC:182662) [Mus musculus]
gi|223462812|gb|AAI47507.1| Unknown (protein for MGC:182533) [Mus musculus]
Length = 266
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM IQLA
Sbjct: 99 IQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLA 158
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
S ++ RP RGG +
Sbjct: 159 --TSQIDRQ-GRPAQSKNRGGMT 178
>gi|148689731|gb|EDL21678.1| mCG1038850 [Mus musculus]
Length = 269
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM IQLA
Sbjct: 102 IQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLA 161
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
S ++ RP RGG +
Sbjct: 162 --TSQIDRQ-GRPAQSKNRGGMT 181
>gi|198424321|ref|XP_002131960.1| PREDICTED: similar to putative TCF coactivator [Ciona intestinalis]
Length = 256
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 50/59 (84%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSEFG L+ + +HYDRSGRSLG+AD+ +ERRSDA +A+KQYN VPLDGR MQI+
Sbjct: 122 ITELFSEFGALRKSAVHYDRSGRSLGSADVHFERRSDAARALKQYNDVPLDGRVMQIRF 180
>gi|196000482|ref|XP_002110109.1| hypothetical protein TRIADDRAFT_53742 [Trichoplax adhaerens]
gi|190588233|gb|EDV28275.1| hypothetical protein TRIADDRAFT_53742 [Trichoplax adhaerens]
Length = 245
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFG LK +HYDRSGRSLGTA++I++R+ A+ A+K+YN +PLDGRPM+IQL
Sbjct: 106 IKELFSEFGNLKKGSVHYDRSGRSLGTAEVIFDRKEGAVAALKKYNNIPLDGRPMKIQLV 165
Query: 62 ADVSVLENTVPR 73
+ T R
Sbjct: 166 NEAVSTRGTTGR 177
>gi|21901961|dbj|BAC05519.1| putative TCF coactivator [Ciona savignyi]
Length = 248
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 51/60 (85%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFG L+ + +HYDR+GRSLG+AD+ +ER+SDA++A+KQYN VPLDGR MQI+
Sbjct: 118 ITELFSEFGALRKSAVHYDRTGRSLGSADVHFERKSDALRALKQYNEVPLDGRVMQIRFV 177
>gi|443690305|gb|ELT92473.1| hypothetical protein CAPTEDRAFT_222506 [Capitella teleta]
Length = 242
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF+EFG +K A +H+DRSG S+GTA++I++ R +A+KA+K+YN VPLDGR M+IQ+
Sbjct: 107 VKELFAEFGRIKKAAVHHDRSGCSMGTAEVIFDSRDNAVKAIKKYNNVPLDGRAMKIQMV 166
Query: 62 AD---VSVLEN-TVPRPVARGGRGGASGGYRNGTAP 93
+D SV + PR AR G G+R G+ P
Sbjct: 167 SDGALPSVASRLSQPRGGARVASRGQQDGHRRGSNP 202
>gi|443706027|gb|ELU02304.1| hypothetical protein CAPTEDRAFT_48713, partial [Capitella teleta]
Length = 151
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 6/97 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF+EFG +K A +H+DRSG S+GTA++I++ R +A+KA+K+YN VPLDGR M+IQ+
Sbjct: 17 VKELFAEFGRIKKAVVHHDRSGCSMGTAEVIFDSRDNAVKAIKKYNNVPLDGRAMKIQMV 76
Query: 62 ADVSVLENTV-----PRPVARGGRGGASGGYRNGTAP 93
+D VL + PR AR G GG+ G+ P
Sbjct: 77 SD-GVLPSVASRLSQPRGGARIANTGQQGGHGRGSNP 112
>gi|47194964|emb|CAF92225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 104
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 48/57 (84%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
ELF+EFGPLK A +HYDRSGRS GTAD+ ++ ++DAIKAMKQYNGVPLDGR I L
Sbjct: 47 ELFAEFGPLKEASIHYDRSGRSKGTADVHFQHKADAIKAMKQYNGVPLDGRASLIYL 103
>gi|225435024|ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product [Vitis vinifera]
Length = 243
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIV 162
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNG 90
VP PV G G ++GG R+
Sbjct: 163 GTNIATPAAVP-PVTNGTFGNSNGGLRSA 190
>gi|147843918|emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIV 162
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYR 88
VP PV G G ++GG R
Sbjct: 163 GTNIATPAAVP-PVTNGTFGNSNGGLR 188
>gi|359320220|ref|XP_003639282.1| PREDICTED: THO complex subunit 4-like [Canis lupus familiaris]
Length = 190
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 47/52 (90%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDG
Sbjct: 122 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG 173
>gi|443690307|gb|ELT92475.1| hypothetical protein CAPTEDRAFT_40457, partial [Capitella teleta]
Length = 151
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 6/97 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF++FG +K A +H+DRSG S+GTA++I++ R +A+KA+K+YN VPLDGR M+IQ+
Sbjct: 17 VKELFADFGRIKKAVVHHDRSGCSMGTAEVIFDSRDNAVKAIKKYNNVPLDGRAMKIQMV 76
Query: 62 ADVSVLENTV-----PRPVARGGRGGASGGYRNGTAP 93
+D VL + PR AR G GG+ G+ P
Sbjct: 77 SD-GVLPSVASRLSQPRGGARIANTGQQGGHGRGSNP 112
>gi|262263336|ref|NP_001160109.1| uncharacterized protein LOC100043224 [Mus musculus]
gi|263195218|ref|NP_001160108.1| uncharacterized protein LOC100043247 [Mus musculus]
Length = 289
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM I L
Sbjct: 102 IQLLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHL- 160
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP +GG +
Sbjct: 161 --VTSQIDRQGRPALNSDKGGMT 181
>gi|397522269|ref|XP_003831197.1| PREDICTED: THO complex subunit 4 [Pan paniscus]
Length = 113
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR--PMQIQ 59
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLD P +Q
Sbjct: 46 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDASYIPPLLQ 105
Query: 60 LAADVSVL 67
L + S+L
Sbjct: 106 LLPEDSLL 113
>gi|262263339|ref|NP_001160110.1| uncharacterized protein LOC100043231 [Mus musculus]
gi|262263341|ref|NP_001160111.1| uncharacterized protein LOC100043235 [Mus musculus]
gi|262263343|ref|NP_001160113.1| uncharacterized protein LOC100043239 [Mus musculus]
Length = 289
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM I L
Sbjct: 102 IQLLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHL- 160
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP +GG +
Sbjct: 161 --VTSQIDRQGRPALNSDKGGMT 181
>gi|262263334|ref|NP_001160106.1| uncharacterized protein LOC100043227 [Mus musculus]
Length = 294
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM I L
Sbjct: 102 IQLLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHL- 160
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP +GG +
Sbjct: 161 --VTSQIDRQGRPALNSDKGGMT 181
>gi|223461989|gb|AAI47488.1| Unknown (protein for MGC:182349) [Mus musculus]
Length = 285
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM I L
Sbjct: 99 IQLLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHL- 157
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP +GG +
Sbjct: 158 --VTSQIDRQGRPALNSDKGGMT 178
>gi|187956926|gb|AAI58091.1| EG667568 protein [Mus musculus]
Length = 286
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM I L
Sbjct: 99 IQLLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHL- 157
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP +GG +
Sbjct: 158 --VTSQIDRQGRPALNSDKGGMT 178
>gi|187956930|gb|AAI58100.1| EG667568 protein [Mus musculus]
Length = 291
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LF+EFG LK + +HYDR GRSLGTA + +ER++DA+KAM++YNG PLDGRPM I L
Sbjct: 99 IQLLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHL- 157
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
V+ + RP +GG +
Sbjct: 158 --VTSQIDRQGRPALNSDKGGMT 178
>gi|221126616|ref|XP_002155396.1| PREDICTED: THO complex subunit 4-like [Hydra magnipapillata]
Length = 244
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFG LK +++YD SGRS GTAD+ +ER+ DA+KA+K YN VPLDGRPM+I
Sbjct: 112 IKELFSEFGNLKKVRINYDESGRSHGTADVFFERKPDALKALKTYNEVPLDGRPMKIVAV 171
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYR 88
+ + E P RG G G Y+
Sbjct: 172 SGGASFEKPFTSPGRRG--SGFRGSYQ 196
>gi|157819383|ref|NP_001103072.1| THO complex subunit 4 [Rattus norvegicus]
gi|149055044|gb|EDM06861.1| rCG32827, isoform CRA_a [Rattus norvegicus]
Length = 189
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
I ELF+EFG LK A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLD
Sbjct: 122 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDA 173
>gi|290561543|gb|ADD38172.1| RNA and export factor-binding protein 2 [Lepeophtheirus salmonis]
Length = 228
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSEFG +K + +HYD+SGRSLGTA++I+ + A+KA YN VPLDGRPMQI+L
Sbjct: 82 IKELFSEFGVIKKSAVHYDKSGRSLGTAEVIFVSLASALKAKNHYNNVPLDGRPMQIELV 141
Query: 62 ADVSVL 67
++L
Sbjct: 142 GSTTLL 147
>gi|395518324|ref|XP_003763313.1| PREDICTED: THO complex subunit 4-like, partial [Sarcophilus
harrisii]
Length = 266
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF FG LK A +HYDRSG SLGTAD+ +ER++DA+KAMK+Y+GV LD RPM +QL
Sbjct: 135 IQELFGAFGTLKKAAVHYDRSGGSLGTADVHFERKADALKAMKRYDGVTLDDRPMNVQLV 194
Query: 62 -ADVSVLENTVPRPVARGGRG 81
+ +S RP G RG
Sbjct: 195 LSQISAQR----RPAQSGKRG 211
>gi|432843262|ref|XP_004065594.1| PREDICTED: THO complex subunit 4-A-like [Oryzias latipes]
Length = 251
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI-QL 60
I +LF EFG LK A +HYDRSGRS G A++ + ++DA+KAMK YNGVPLDG PM+I Q+
Sbjct: 116 IKDLFEEFGTLKKASIHYDRSGRSKGVAEVHFVNKADALKAMKHYNGVPLDGHPMKIQQV 175
Query: 61 AADV 64
A+DV
Sbjct: 176 ASDV 179
>gi|335310769|ref|XP_003362184.1| PREDICTED: THO complex subunit 4-like, partial [Sus scrofa]
Length = 224
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 5/67 (7%)
Query: 15 AKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVSVLENTVPRP 74
A +HYDRSGRSLGTAD+ +ER++DA+KAMKQYNGVPLDGRPM IQL V+ +T RP
Sbjct: 103 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL---VTSQIDTQRRP 159
Query: 75 --VARGG 79
V RGG
Sbjct: 160 ASVNRGG 166
>gi|444517170|gb|ELV11398.1| THO complex subunit 4 [Tupaia chinensis]
Length = 190
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I LF EFG L K A +HYD SG SLGTA + +++++DA+KA+++YNGVPLDGRP+ IQL
Sbjct: 54 IQMLFGEFGALQKQAAVHYDGSGHSLGTATVHFQQKADALKALREYNGVPLDGRPLIIQL 113
Query: 61 AADVSVLENTVPRPVARGGRGGASGGYRNG 90
V+ +T+ RP++ G G G + G
Sbjct: 114 ---VTSPGDTLKRPISSGNGGSLDGKHHAG 140
>gi|357120113|ref|XP_003561774.1| PREDICTED: THO complex subunit 4-like, partial [Brachypodium
distachyon]
Length = 230
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFSE G LK +HYDRSGRS GTA++I+ RR DA+ AMK+YN V LDG+PM+I++
Sbjct: 77 VKELFSELGDLKRCSIHYDRSGRSKGTAEVIFARRGDAVAAMKKYNNVQLDGKPMKIEI 135
>gi|294464863|gb|ADE77937.1| unknown [Picea sitchensis]
Length = 274
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+E G LKS LHYDRSGRS GTA++++ ++ DA+ A+K+YN V LDG+PM+I+L
Sbjct: 118 IKELFTEVGDLKSCALHYDRSGRSNGTAEVVFVKKVDAVAAVKRYNNVQLDGKPMKIEL 176
>gi|224113973|ref|XP_002332459.1| predicted protein [Populus trichocarpa]
gi|222832494|gb|EEE70971.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 8/88 (9%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 24 IKELFSEIGDLKRYSVHYDRSGRSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEI- 82
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRN 89
V N RP +G YRN
Sbjct: 83 ----VGTNIATRPAV---PPSTNGMYRN 103
>gi|168064322|ref|XP_001784112.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664363|gb|EDQ51086.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G L+ ++YDRSGRS GTA++++ R+ DA+ A+K+YN V LDG+PM+I++
Sbjct: 107 IKELFSEIGDLRRCSINYDRSGRSKGTAEVVFMRKPDALNAVKRYNNVQLDGKPMKIEI- 165
Query: 62 ADVSVLENTVPRPVAR 77
+ EN+V P AR
Sbjct: 166 --IGTNENSVSIPFAR 179
>gi|255581121|ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 247
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYDRSGRS GTA++++ RR+DA+ A+K+YN V LDG+PM+I++
Sbjct: 107 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEI 165
>gi|226486950|emb|CAX75340.1| THO complex subunit 4 [Schistosoma japonicum]
Length = 213
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL- 60
I ELF EFG ++ A +HYDRSGRSLGTA++++ A KA YNGVPLDGRPM IQL
Sbjct: 93 INELFREFGAIRKATVHYDRSGRSLGTAEVVFINPLSATKAKNHYNGVPLDGRPMVIQLV 152
Query: 61 --AADVSV 66
AA+ +V
Sbjct: 153 GAAAEATV 160
>gi|56759476|gb|AAW27878.1| SJCHGC01511 protein [Schistosoma japonicum]
gi|226470454|emb|CAX70507.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486952|emb|CAX75341.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486954|emb|CAX75342.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486956|emb|CAX75343.1| THO complex subunit 4 [Schistosoma japonicum]
Length = 213
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL- 60
I ELF EFG ++ A +HYDRSGRSLGTA++++ A KA YNGVPLDGRPM IQL
Sbjct: 93 INELFREFGAIRKATVHYDRSGRSLGTAEVVFINPLSATKAKNHYNGVPLDGRPMVIQLV 152
Query: 61 --AADVSV 66
AA+ +V
Sbjct: 153 GAAAEATV 160
>gi|356542471|ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 247
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +HYDRSGRS GTA++++ RR+DA+ A+K+YN V LDG+PM+I++
Sbjct: 105 IKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIV 164
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
P P GA G + NG + + RGG
Sbjct: 165 GTNISTPGVAPAP------NGAIGNF-NGVPRSGQGRGG 196
>gi|256071333|ref|XP_002571995.1| RNA and export factor binding protein [Schistosoma mansoni]
gi|350645138|emb|CCD60146.1| RNA and export factor binding protein, putative [Schistosoma
mansoni]
Length = 213
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 44/59 (74%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF EFG ++ A +HYDRSGRSLGTA++++ A KA YNGVPLDGRPM IQL
Sbjct: 93 INELFREFGAIRKATVHYDRSGRSLGTAEVVFVNPLSATKAKNHYNGVPLDGRPMVIQL 151
>gi|356539036|ref|XP_003538006.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 247
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 7/99 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +HYDRSGRS GTA++++ RR+DA+ A+K+YN V LDG+PM+I+
Sbjct: 105 IKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIE-- 162
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
++ + P R GA G + +G + + RGG
Sbjct: 163 ----IVGTNISTPGVAPARNGAIGNF-DGVPRSGQGRGG 196
>gi|449450684|ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
gi|449508143|ref|XP_004163231.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 12/93 (12%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K +HYD+SGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 101 IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIV 160
Query: 62 ------------ADVSVLENTVPRPVARGGRGG 82
A V+ EN+ P + GRGG
Sbjct: 161 GTNISTPAVGPTAAVNPFENSNGAPRRQQGRGG 193
>gi|108707487|gb|ABF95282.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108707488|gb|ABF95283.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|215693824|dbj|BAG89023.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704293|dbj|BAG93133.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 193
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 42 IKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMKIEI 100
>gi|256071335|ref|XP_002571996.1| RNA and export factor binding protein [Schistosoma mansoni]
gi|350645137|emb|CCD60145.1| RNA and export factor binding protein, putative [Schistosoma
mansoni]
Length = 155
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF EFG ++ A +HYDRSGRSLGTA++++ A KA YNGVPLDGRPM IQL
Sbjct: 93 INELFREFGAIRKATVHYDRSGRSLGTAEVVFVNPLSATKAKNHYNGVPLDGRPMVIQLV 152
>gi|242036141|ref|XP_002465465.1| hypothetical protein SORBIDRAFT_01g039330 [Sorghum bicolor]
gi|241919319|gb|EER92463.1| hypothetical protein SORBIDRAFT_01g039330 [Sorghum bicolor]
Length = 257
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK ++YDRSGRS GTA++++ RRSDA+ A+K+YN V LDG+PM+I++
Sbjct: 114 IKELFSELGDLKRYSINYDRSGRSKGTAEVVFARRSDAVAAVKKYNNVQLDGKPMKIEIV 173
Query: 62 ADVSVLENTVPRPVARGG--RGGASGGYRNGTAPTYRPR 98
+ PV+ GG R A R G AP P+
Sbjct: 174 G-TNTPTAAAALPVSNGGHARNAARSAPR-GAAPAGMPQ 210
>gi|159138039|gb|ABW89022.1| transcriptional coactivator [Clonorchis sinensis]
Length = 210
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 47/68 (69%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF EFG ++ A +HYDRSGRSLGTA++++ A KA YNGVPLDGRPM IQL
Sbjct: 86 INELFREFGAIRRAAVHYDRSGRSLGTAEVVFLNPLSATKARSHYNGVPLDGRPMVIQLV 145
Query: 62 ADVSVLEN 69
S E+
Sbjct: 146 GAGSTAES 153
>gi|339241051|ref|XP_003376451.1| THO complex subunit 4 [Trichinella spiralis]
gi|316974832|gb|EFV58304.1| THO complex subunit 4 [Trichinella spiralis]
Length = 199
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF G ++ A +HYD GRS+G AD++Y RR DA++A+K++N + LDGRPM+I++
Sbjct: 66 VKELFQGMGAVRKAAVHYDERGRSMGLADVVYHRRVDAMRALKEFNNIKLDGRPMRIEMV 125
Query: 62 ADVSVLE--NTVPRPVARGGRGGASG 85
D SV + N GRG G
Sbjct: 126 KDKSVGDSVNAFSSWTNSAGRGNLRG 151
>gi|186532595|ref|NP_001119461.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009874|gb|AED97257.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 211
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +H+DRSGRS GTA+++Y RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI- 162
Query: 62 ADVSVLENTVPRPVARGGRGGASG 85
V T P R G ++G
Sbjct: 163 --VGTNLQTAAAPSGRPANGNSNG 184
>gi|302753882|ref|XP_002960365.1| hypothetical protein SELMODRAFT_74080 [Selaginella moellendorffii]
gi|300171304|gb|EFJ37904.1| hypothetical protein SELMODRAFT_74080 [Selaginella moellendorffii]
Length = 122
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +H+DRSGRS TAD+++ R+ DA+KAMK YN V LDG+PM+I+
Sbjct: 42 IKELFSEQGDLKRCAVHFDRSGRSKCTADVVFARKYDALKAMKHYNNVQLDGKPMKIEC 100
>gi|125543328|gb|EAY89467.1| hypothetical protein OsI_10999 [Oryza sativa Indica Group]
Length = 273
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 122 IKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMKIEI 180
>gi|108707486|gb|ABF95281.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|125585793|gb|EAZ26457.1| hypothetical protein OsJ_10345 [Oryza sativa Japonica Group]
gi|215701346|dbj|BAG92770.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765693|dbj|BAG87390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767507|dbj|BAG99735.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 273
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 122 IKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMKIEI 180
>gi|334188502|ref|NP_001190572.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009875|gb|AED97258.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 245
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +H+DRSGRS GTA+++Y RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI- 162
Query: 62 ADVSVLENTVPRPVARGGRGGASG 85
V T P R G ++G
Sbjct: 163 --VGTNLQTAAAPSGRPANGNSNG 184
>gi|30697310|ref|NP_851229.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|22531190|gb|AAM97099.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
gi|23198018|gb|AAN15536.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
gi|332009871|gb|AED97254.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 244
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +H+DRSGRS GTA+++Y RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI- 162
Query: 62 ADVSVLENTVPRPVARGGRGGASG 85
V T P R G ++G
Sbjct: 163 --VGTNLQTAAAPSGRPANGNSNG 184
>gi|21555029|gb|AAM63758.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
Length = 243
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +H+DRSGRS GTA+++Y RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI- 162
Query: 62 ADVSVLENTVPRPVARGGRGGASG 85
V T P R G ++G
Sbjct: 163 --VGTNLQTAAAPSGRPANGNSNG 184
>gi|42573738|ref|NP_974965.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009873|gb|AED97256.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 242
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +H+DRSGRS GTA+++Y RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 102 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI- 160
Query: 62 ADVSVLENTVPRPVARGGRGGASG 85
V T P R G ++G
Sbjct: 161 --VGTNLQTAAAPSGRPANGNSNG 182
>gi|297600721|ref|NP_001049725.2| Os03g0278300 [Oryza sativa Japonica Group]
gi|255674403|dbj|BAF11639.2| Os03g0278300, partial [Oryza sativa Japonica Group]
Length = 238
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 87 IKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMKIEI 145
>gi|42568662|ref|NP_200803.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009872|gb|AED97255.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 178
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +H+DRSGRS GTA+++Y RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 38 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI- 96
Query: 62 ADVSVLENTVPRPVARGGRGGASG 85
V T P R G ++G
Sbjct: 97 --VGTNLQTAAAPSGRPANGNSNG 118
>gi|51490665|emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 109 IKELFSEAGDLKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEI 167
>gi|297793551|ref|XP_002864660.1| hypothetical protein ARALYDRAFT_496130 [Arabidopsis lyrata subsp.
lyrata]
gi|297310495|gb|EFH40919.1| hypothetical protein ARALYDRAFT_496130 [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +H+DRSGRS GTA+++Y RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 99 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI- 157
Query: 62 ADVSVLENTVPRPVARGGRGGASG 85
V T P R G ++G
Sbjct: 158 --VGTNLQTAAAPSGRPANGNSNG 179
>gi|343172826|gb|AEL99116.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 163
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFSE G LK +HYDRSGRS GTA+++Y RR+DA+ A+K+YN V LDG+P++I++
Sbjct: 27 VKELFSEVGDLKRYTVHYDRSGRSKGTAEVVYSRRNDALAAVKRYNNVELDGKPIKIEIV 86
Query: 62 ADVSVLENTVPRPVARG 78
++ P P + G
Sbjct: 87 G-TNISSARAPPPASNG 102
>gi|414866139|tpg|DAA44696.1| TPA: hypothetical protein ZEAMMB73_540613 [Zea mays]
Length = 205
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK + YDRSGRS GTA++++ RRSDA+ A+K+YN V LDG+PM+I++
Sbjct: 62 IKELFSELGDLKRFSIIYDRSGRSKGTAEVVFARRSDAVAAVKKYNNVQLDGKPMKIEIV 121
Query: 62 ADVSVLENTVPRPVARGGRG 81
+ + PV+ GG
Sbjct: 122 G-TNTPTASAALPVSNGGHA 140
>gi|357472739|ref|XP_003606654.1| THO complex subunit [Medicago truncatula]
gi|355507709|gb|AES88851.1| THO complex subunit [Medicago truncatula]
Length = 376
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 223 IKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIV 282
>gi|358341495|dbj|GAA49160.1| THO complex subunit 4 [Clonorchis sinensis]
Length = 466
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF EFG ++ A +HYDRSGRSLGTA++++ A KA YNGVPLDGRPM IQL
Sbjct: 86 INELFREFGAIRRAAVHYDRSGRSLGTAEVVFLNPLSATKARSHYNGVPLDGRPMVIQLV 145
Query: 62 ADVSVL 67
V +
Sbjct: 146 GAVESI 151
>gi|356499657|ref|XP_003518653.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 260
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 11/106 (10%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA--- 61
LFSE G LKS +HYD+SGRS GTA++++ R SDA+ A+K+YN + LDG+P+QI+L
Sbjct: 88 LFSEEGELKSYTIHYDQSGRSKGTAEVVFVRHSDALLAIKKYNNMRLDGKPLQIELVGTS 147
Query: 62 ----ADVSVLENTV---PRPVARGGRGGA-SGGYRNGTAPTYRPRG 99
A + +N + P V RG G+ N A Y PRG
Sbjct: 148 LATPAVAPLCQNNLMGRPNDVHFSTRGRVGDSGFHNDFAQGYLPRG 193
>gi|343172824|gb|AEL99115.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 163
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 48/60 (80%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFSE G LK +HYDRSGRS GTA+++Y RR+DA+ A+K+YN V LDG+P++I++
Sbjct: 27 VKELFSEVGDLKRYTVHYDRSGRSKGTAEVVYSRRNDALAAVKRYNNVELDGKPIKIEIV 86
>gi|226503573|ref|NP_001145994.1| uncharacterized protein LOC100279524 [Zea mays]
gi|195619398|gb|ACG31529.1| THO complex subunit 4 [Zea mays]
gi|195624712|gb|ACG34186.1| THO complex subunit 4 [Zea mays]
gi|219885251|gb|ACL53000.1| unknown [Zea mays]
gi|414866140|tpg|DAA44697.1| TPA: THO complex subunit 4 isoform 1 [Zea mays]
gi|414866141|tpg|DAA44698.1| TPA: THO complex subunit 4 isoform 2 [Zea mays]
Length = 253
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK + YDRSGRS GTA++++ RRSDA+ A+K+YN V LDG+PM+I++
Sbjct: 110 IKELFSELGDLKRFSIIYDRSGRSKGTAEVVFARRSDAVAAVKKYNNVQLDGKPMKIEIV 169
Query: 62 ADVSVLENTVPRPVARGGRG 81
+ + PV+ GG
Sbjct: 170 G-TNTPTASAALPVSNGGHA 188
>gi|302767862|ref|XP_002967351.1| hypothetical protein SELMODRAFT_87004 [Selaginella moellendorffii]
gi|300165342|gb|EFJ31950.1| hypothetical protein SELMODRAFT_87004 [Selaginella moellendorffii]
Length = 238
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +H+DRSGRS TAD+++ R+ DA+KAMK YN V LDG+PM+I+
Sbjct: 114 IKELFSEQGDLKRCAVHFDRSGRSKCTADVVFARKYDALKAMKHYNNVQLDGKPMKIEC 172
>gi|356550261|ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
Length = 243
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF E G +K +HYDRSGRS GTA++++ RR+DA+ A+K+YN V LDG+PM++++
Sbjct: 102 IKELFLEVGDVKRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIV 161
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNG 90
++ + P P G G +G R+G
Sbjct: 162 G-TNIATHAAP-PAVNGTFGNPTGVPRSG 188
>gi|357161377|ref|XP_003579071.1| PREDICTED: RNA and export factor-binding protein 2-like
[Brachypodium distachyon]
Length = 259
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK ++YD+SGRS GTA++++ RRSDA+ A+K+YN V LDG+PMQI++
Sbjct: 112 IKELFSEVGDLKRYSINYDKSGRSKGTAEVVFARRSDALAALKRYNNVQLDGKPMQIEV 170
>gi|224077330|ref|XP_002305214.1| predicted protein [Populus trichocarpa]
gi|222848178|gb|EEE85725.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 47/60 (78%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +HYD++GRS G+A+++Y RRSDA A+K+YN V LDGRPM+I++
Sbjct: 119 IRELFAEIGDLKRFAVHYDKNGRSTGSAEVMYTRRSDAFSALKKYNNVLLDGRPMKIEIV 178
>gi|9757916|dbj|BAB08363.1| RNA and export factor binding protein 2-I-like protein [Arabidopsis
thaliana]
Length = 239
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+E G LK +H+DRSGRS GTA+++Y RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI 162
>gi|223947451|gb|ACN27809.1| unknown [Zea mays]
gi|413956155|gb|AFW88804.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 182
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK ++YDRSGRS GTA++++ RRSDA+ A+K+Y+ V LDG+PM+I++
Sbjct: 39 IKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEI 97
>gi|224069282|ref|XP_002302945.1| predicted protein [Populus trichocarpa]
gi|222844671|gb|EEE82218.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 13/103 (12%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +HYD+ GRS G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 121 IRELFAEVGDLKRYAVHYDKDGRSSGSAEVMYTRRSDAFAALKKYNNVLLDGKPMKIEIV 180
Query: 62 ADVSVLENTVPRPV----ARGGRGGASGGYRNGTAPTYRPRGG 100
P PV AR GA+G + T RGG
Sbjct: 181 G---------PNPVVPISARMNVTGANGKKKRTVVTTQSRRGG 214
>gi|194703592|gb|ACF85880.1| unknown [Zea mays]
gi|413956152|gb|AFW88801.1| THO complex subunit 4 isoform 1 [Zea mays]
gi|413956153|gb|AFW88802.1| THO complex subunit 4 isoform 2 [Zea mays]
Length = 254
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK ++YDRSGRS GTA++++ RRSDA+ A+K+Y+ V LDG+PM+I++
Sbjct: 111 IKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEI 169
>gi|195637864|gb|ACG38400.1| THO complex subunit 4 [Zea mays]
Length = 253
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK ++YDRSGRS GTA++++ RRSDA+ A+K+Y+ V LDG+PM+I++
Sbjct: 110 IKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEI 168
>gi|167999562|ref|XP_001752486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696386|gb|EDQ82725.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 249
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF E G LK ++YDRSGRS GTA++++ R+ DA+ AMK+YN V LDG+PM+I++
Sbjct: 105 IKELFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVSAMKRYNNVQLDGKPMKIEM- 163
Query: 62 ADVSVLENTVPRPVARGGRGGA 83
+ N + PV GA
Sbjct: 164 ----IGTNLIAAPVPAARSSGA 181
>gi|326506412|dbj|BAJ86524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFSE G LK +++DRSGRS GTA++I+ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 59 LKELFSELGDLKRCSINFDRSGRSKGTAEVIFARRGDAVAAIKKYNNVQLDGKPMKIEI 117
>gi|395512174|ref|XP_003760319.1| PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 4-like
[Sarcophilus harrisii]
Length = 331
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+ FG K A +HYD S RSLGTAD+ +ER++DA+K +K YNGV LDG P+ I L
Sbjct: 194 IQELFAAFGTXKKAAVHYDPSSRSLGTADVHFERKADALKGLKHYNGVLLDGNPINIXLL 253
Query: 62 ADVSVLENTVPRPVARGGRG 81
+ +T RP RG
Sbjct: 254 ISQT---DTHGRPAXNVNRG 270
>gi|223944243|gb|ACN26205.1| unknown [Zea mays]
gi|413956151|gb|AFW88800.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 244
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK ++YDRSGRS GTA++++ RRSDA+ A+K+Y+ V LDG+PM+I++
Sbjct: 111 IKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEI 169
>gi|226498374|ref|NP_001140668.1| uncharacterized protein LOC100272743 [Zea mays]
gi|194700496|gb|ACF84332.1| unknown [Zea mays]
gi|413956154|gb|AFW88803.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 224
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK ++YDRSGRS GTA++++ RRSDA+ A+K+Y+ V LDG+PM+I++
Sbjct: 111 IKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEI 169
>gi|326505472|dbj|BAJ95407.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512088|dbj|BAJ96025.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527861|dbj|BAK08160.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFSE G LK +++DRSGRS GTA++I+ RR DA+ A+K+YN V LDG+PM+I++
Sbjct: 121 LKELFSELGDLKRCSINFDRSGRSKGTAEVIFARRGDAVAAIKKYNNVQLDGKPMKIEI 179
>gi|9663023|emb|CAC01083.1| DIP1 protein [Arabidopsis thaliana]
Length = 295
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 5/75 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I EL++E G LK +HYD++GR G+A+++Y RRSDAI+AM++YN V LDGRPM++++
Sbjct: 123 IRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEIL 182
Query: 62 ADVSVLENTVPRPVA 76
NT PVA
Sbjct: 183 GG-----NTESAPVA 192
>gi|12323574|gb|AAG51767.1|AC066691_7 RNA and export factor binding protein, putative; 38196-36208
[Arabidopsis thaliana]
Length = 282
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 5/75 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I EL++E G LK +HYD++GR G+A+++Y RRSDAI+AM++YN V LDGRPM++++
Sbjct: 110 IRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEIL 169
Query: 62 ADVSVLENTVPRPVA 76
NT PVA
Sbjct: 170 GG-----NTESAPVA 179
>gi|168026155|ref|XP_001765598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683236|gb|EDQ69648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK ++YDRSGRS GTA++++ R+ DA+ AMK+YN V LDG+PM+I++
Sbjct: 106 IKELFSEVGDLKRCSINYDRSGRSKGTAEVVFIRKPDALSAMKRYNNVQLDGKPMKIEI 164
>gi|18408471|ref|NP_564871.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334183676|ref|NP_001185329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15294238|gb|AAK95296.1|AF410310_1 At1g66260/T6J19_1 [Arabidopsis thaliana]
gi|23506135|gb|AAN31079.1| At1g66260/T6J19_1 [Arabidopsis thaliana]
gi|332196365|gb|AEE34486.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332196366|gb|AEE34487.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 295
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 5/75 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I EL++E G LK +HYD++GR G+A+++Y RRSDAI+AM++YN V LDGRPM++++
Sbjct: 123 IRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEIL 182
Query: 62 ADVSVLENTVPRPVA 76
NT PVA
Sbjct: 183 GG-----NTESAPVA 192
>gi|449456227|ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucumis sativus]
Length = 286
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K +HYD++GR G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 113 IKELFSEIGDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEML 172
Query: 62 AD 63
D
Sbjct: 173 GD 174
>gi|357460875|ref|XP_003600719.1| THO complex subunit [Medicago truncatula]
gi|355489767|gb|AES70970.1| THO complex subunit [Medicago truncatula]
Length = 291
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYD++G G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 125 IRELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIV 184
Query: 62 ADVSVL 67
S L
Sbjct: 185 GTNSAL 190
>gi|449532026|ref|XP_004172985.1| PREDICTED: THO complex subunit 4-like, partial [Cucumis sativus]
Length = 368
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K +HYD++GR G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 113 IKELFSEIGDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEML 172
Query: 62 AD 63
D
Sbjct: 173 GD 174
>gi|255575082|ref|XP_002528446.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223532122|gb|EEF33929.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 149
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADV 64
LFS+ G L+S +HYD+SGRS GTA++++ R+ DA+ AMK+YN +PLDG+PM I+L
Sbjct: 84 LFSDVGELRSQSVHYDKSGRSKGTAEVVFARQIDALAAMKKYNNLPLDGKPMIIELVGAD 143
Query: 65 SVLENT 70
S T
Sbjct: 144 SFTSTT 149
>gi|168020731|ref|XP_001762896.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686005|gb|EDQ72397.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 274
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF E G LK ++YDRSGRS GTA++++ R+ DA+ AM++YN V LDG+PM+I++
Sbjct: 118 IKELFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVNAMRRYNNVQLDGKPMKIEM 176
>gi|94466657|emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
Length = 246
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K +HYD+SGRS GTA++I+ RR DA A+K+YN V LDG+PM+I+ A
Sbjct: 109 IKELFSEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFA 168
>gi|51490663|emb|CAG26902.1| ALY protein [Nicotiana benthamiana]
Length = 249
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K +HYD+SGRS GTA++I+ RR DA A+K+YN V LDG+PM+I+ A
Sbjct: 112 IKELFSEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFA 171
>gi|115467430|ref|NP_001057314.1| Os06g0256200 [Oryza sativa Japonica Group]
gi|52077258|dbj|BAD46300.1| putative DIP2 protein [Oryza sativa Japonica Group]
gi|113595354|dbj|BAF19228.1| Os06g0256200 [Oryza sativa Japonica Group]
gi|215692775|dbj|BAG88197.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635337|gb|EEE65469.1| hypothetical protein OsJ_20860 [Oryza sativa Japonica Group]
Length = 294
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ-L 60
I ELFSE G LK +HYD + R G+A++I+ RRS+A+ A+K+YN V LDG+PM+I+ +
Sbjct: 126 IQELFSEMGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVAALKRYNNVRLDGKPMKIEVI 185
Query: 61 AADVSVLENTVPR-PVARGGRG 81
AD+ + + PR V G RG
Sbjct: 186 GADLGMAAPSAPRVSVVPGARG 207
>gi|356537904|ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820344 [Glycine max]
Length = 298
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYD++G G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 132 IRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIV 191
Query: 62 -----------ADVSVLENTVPRPVARGGRGGASGG 86
+V+ + R V RGG +GG
Sbjct: 192 GSNSELPISARVNVTGVNGRRKRTVVMTSRGGQAGG 227
>gi|357460877|ref|XP_003600720.1| THO complex subunit [Medicago truncatula]
gi|355489768|gb|AES70971.1| THO complex subunit [Medicago truncatula]
Length = 218
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYD++G G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 52 IRELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIV 111
Query: 62 ADVSVL 67
S L
Sbjct: 112 GTNSAL 117
>gi|125554793|gb|EAZ00399.1| hypothetical protein OsI_22414 [Oryza sativa Indica Group]
Length = 272
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ-L 60
I ELFSE G LK +HYD + R G+A++I+ RRS+A+ A+K+YN V LDG+PM+I+ +
Sbjct: 104 IQELFSEMGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVAALKRYNNVRLDGKPMKIEVI 163
Query: 61 AADVSVLENTVPR-PVARGGRG 81
AD+ + + PR V G RG
Sbjct: 164 GADLGMAAPSAPRVSVVPGARG 185
>gi|255582255|ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223528429|gb|EEF30463.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 268
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 47/60 (78%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF+E G LK +HYD++GRS G+A+++Y RRS+A A+K+YN V LDG+PM+I++
Sbjct: 111 IRELFAEIGDLKRYAVHYDKNGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKIEIV 170
>gi|9663025|emb|CAC01084.1| DIP2 protein [Arabidopsis thaliana]
Length = 288
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G ++ +HYD++GR GTA+++Y RRSDA +A+K+YN V LDGRPM++++
Sbjct: 109 IRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEI 167
>gi|145334661|ref|NP_001078676.1| THO complex subunit 4 [Arabidopsis thaliana]
gi|332006840|gb|AED94223.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 280
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G ++ +HYD++GR GTA+++Y RRSDA +A+K+YN V LDGRPM++++
Sbjct: 109 IRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEI 167
>gi|297841223|ref|XP_002888493.1| hypothetical protein ARALYDRAFT_475731 [Arabidopsis lyrata subsp.
lyrata]
gi|297334334|gb|EFH64752.1| hypothetical protein ARALYDRAFT_475731 [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 48/59 (81%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I EL++E G LK +HYD++GR G+A+++Y RRSDA++AM++YN V LDGRPM++++
Sbjct: 122 IRELYTEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDALQAMRKYNNVLLDGRPMRLEI 180
>gi|297805348|ref|XP_002870558.1| hypothetical protein ARALYDRAFT_493750 [Arabidopsis lyrata subsp.
lyrata]
gi|297316394|gb|EFH46817.1| hypothetical protein ARALYDRAFT_493750 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G ++ +HYD++GR GTA+++Y RRSDA +A+K+YN V LDGRPM++++
Sbjct: 110 IRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEI 168
>gi|297302872|ref|XP_001119635.2| PREDICTED: THO complex subunit 4-like, partial [Macaca mulatta]
Length = 87
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I EL +E G LK +HY+RSGR LG+AD+ +ER++ A+KAMKQY+G PL G P+ IQL
Sbjct: 29 IRELLAESGTLKKTAVHYNRSGRPLGSADMHFERKAHALKAMKQYHGAPLAGCPVNIQL 87
>gi|30693141|ref|NP_198588.2| THO complex subunit 4 [Arabidopsis thaliana]
gi|37201990|gb|AAQ89610.1| At5g37720 [Arabidopsis thaliana]
gi|110735849|dbj|BAE99901.1| hypothetical protein [Arabidopsis thaliana]
gi|332006839|gb|AED94222.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 288
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G ++ +HYD++GR GTA+++Y RRSDA +A+K+YN V LDGRPM++++
Sbjct: 109 IRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEI 167
>gi|9757981|dbj|BAB08317.1| unnamed protein product [Arabidopsis thaliana]
Length = 330
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G ++ +HYD++GR GTA+++Y RRSDA +A+K+YN V LDGRPM++++
Sbjct: 151 IRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEI 209
>gi|356569696|ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
Length = 298
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYD++G G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 131 IRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIV 190
Query: 62 ADVSVL 67
S L
Sbjct: 191 GSNSEL 196
>gi|224059518|ref|XP_002299886.1| predicted protein [Populus trichocarpa]
gi|222847144|gb|EEE84691.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF E G LK +HYDRSGRS GTA++++ R+++A+ A+K+YN V LDG+PM+I++
Sbjct: 96 IKELFLEVGELKRYSIHYDRSGRSKGTAEVVFARQAEAVAAVKRYNNVQLDGKPMKIEI 154
>gi|125575903|gb|EAZ17125.1| hypothetical protein OsJ_32627 [Oryza sativa Japonica Group]
Length = 177
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K ++YDRSGRS GTA++++ R+SDA+ A+K+YN V LDG+PM+++L
Sbjct: 88 IKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLEL- 146
Query: 62 ADVSVLENTVPRPVARGGRGGASGGY 87
+ N P P A G +G +
Sbjct: 147 ----IGINIEPPPPAIFGFAAPAGYF 168
>gi|30679669|ref|NP_195873.2| THO complex subunit 4 [Arabidopsis thaliana]
gi|22655123|gb|AAM98152.1| putative protein [Arabidopsis thaliana]
gi|30023796|gb|AAP13431.1| At5g02530 [Arabidopsis thaliana]
gi|332003102|gb|AED90485.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 292
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+ M+I++
Sbjct: 124 IKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEI 182
>gi|334187381|ref|NP_001190207.1| THO complex subunit 4 [Arabidopsis thaliana]
gi|7413642|emb|CAB85990.1| putative protein [Arabidopsis thaliana]
gi|332003103|gb|AED90486.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 290
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+ M+I++
Sbjct: 124 IKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEI 182
>gi|115486846|ref|NP_001065229.1| Os12g0100100 [Oryza sativa Japonica Group]
gi|77553349|gb|ABA96145.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113648417|dbj|BAF28929.1| Os12g0100100 [Oryza sativa Japonica Group]
gi|215692544|dbj|BAG87964.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768790|dbj|BAH01019.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K ++YDRSGRS GTA++++ R+SDA+ A+K+YN V LDG+PM+++L
Sbjct: 88 IKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLEL- 146
Query: 62 ADVSVLENTVPRPVARGGRGGASGGY 87
+ N P P A G +G +
Sbjct: 147 ----IGINIEPPPPAIFGFAAPAGYF 168
>gi|297810351|ref|XP_002873059.1| hypothetical protein ARALYDRAFT_487031 [Arabidopsis lyrata subsp.
lyrata]
gi|297318896|gb|EFH49318.1| hypothetical protein ARALYDRAFT_487031 [Arabidopsis lyrata subsp.
lyrata]
Length = 290
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYDRSGRS GTA++++ RR DA+ A+K+YN V LDG+ M+I++
Sbjct: 123 IKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIV 182
Query: 62 ADVSVLENTVPRP 74
++ T+P P
Sbjct: 183 G-TNLSAPTLPLP 194
>gi|449462627|ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K ++YD+SGRS GTA++++ R++DA+ A+K+YN V LDG+PM++++
Sbjct: 103 IKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIV 162
Query: 62 ADVSVLENTVPRP 74
+++ VP P
Sbjct: 163 G-TNIVTPAVPAP 174
>gi|218190891|gb|EEC73318.1| hypothetical protein OsI_07506 [Oryza sativa Indica Group]
Length = 226
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K ++YD+SGRS GTA++++ R+SDA+ A+K+YN V LDG+PM+++L
Sbjct: 84 IKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLEL- 142
Query: 62 ADVSVLENTVPRPVARGGRGGASGGY 87
+ N P P A G +G +
Sbjct: 143 ----IGINIEPPPPAMFGFAAPAGYF 164
>gi|297611011|ref|NP_001065221.2| Os11g0100200 [Oryza sativa Japonica Group]
gi|77548276|gb|ABA91073.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218190893|gb|EEC73320.1| hypothetical protein OsI_07508 [Oryza sativa Indica Group]
gi|222615348|gb|EEE51480.1| hypothetical protein OsJ_32621 [Oryza sativa Japonica Group]
gi|255679677|dbj|BAF27356.2| Os11g0100200 [Oryza sativa Japonica Group]
Length = 224
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K ++YD+SGRS GTA++++ R+SDA+ A+K+YN V LDG+PM+++L
Sbjct: 84 IKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLEL- 142
Query: 62 ADVSVLENTVPRPVARGGRGGASGGY 87
+ N P P A G +G +
Sbjct: 143 ----IGINIEPPPPAMFGFAAPAGYF 164
>gi|94466659|emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]
Length = 275
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 17/114 (14%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G L +HYD++GR G A++++ RRSDA +A+K+YN V LDG+PM+I++
Sbjct: 113 IRELFSEIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQALKRYNNVQLDGKPMKIEVV 172
Query: 62 ADVSVLENTVPRPVARG--------------GRGGASGGYRNGTAPTYRPRGGL 101
A + + + V RG GRG AS R + R RGG
Sbjct: 173 APPTDMPLSARVDVGRGNGRRTVVMMPGSARGRGSASAANR---GSSQRGRGGF 223
>gi|302756027|ref|XP_002961437.1| hypothetical protein SELMODRAFT_7263 [Selaginella moellendorffii]
gi|302817177|ref|XP_002990265.1| hypothetical protein SELMODRAFT_8476 [Selaginella moellendorffii]
gi|300141974|gb|EFJ08680.1| hypothetical protein SELMODRAFT_8476 [Selaginella moellendorffii]
gi|300170096|gb|EFJ36697.1| hypothetical protein SELMODRAFT_7263 [Selaginella moellendorffii]
Length = 80
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYD+ GRS GTA++ + R+ A+ AMKQYN V LDG+PM I +
Sbjct: 21 IKELFSEIGELKQCSIHYDKVGRSKGTAEVYFARKERALVAMKQYNNVQLDGKPMVIDM 79
>gi|242047942|ref|XP_002461717.1| hypothetical protein SORBIDRAFT_02g007020 [Sorghum bicolor]
gi|241925094|gb|EER98238.1| hypothetical protein SORBIDRAFT_02g007020 [Sorghum bicolor]
Length = 255
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFSE G LK ++YD+ GRS GTA++++ R+ DA+ A+K+YNGV LDG+PM ++L
Sbjct: 105 VQELFSEVGELKRYSMNYDKDGRSKGTAEVVFARKVDALDAIKRYNGVLLDGKPMNLEL 163
>gi|449512820|ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Cucumis sativus]
Length = 248
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G +K ++YD+SGRS GTA++ + R++DA+ A+K+YN V LDG+PM++++
Sbjct: 103 IKELFSEVGDVKRYSINYDKSGRSKGTAEIXFSRQADALAAIKRYNNVQLDGKPMKLEIV 162
Query: 62 ADVSVLENTVPRP 74
+++ VP P
Sbjct: 163 G-TNIVTPAVPAP 174
>gi|348686699|gb|EGZ26513.1| hypothetical protein PHYSODRAFT_470000 [Phytophthora sojae]
Length = 209
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF G + A++ YDRSGRS G A + + RRSDA KA+KQY+G LDG+PMQI L
Sbjct: 69 VRELFGTVGEVSKAEIVYDRSGRSKGIARVWFARRSDADKAIKQYDGRTLDGQPMQISLD 128
Query: 62 ADVSV 66
AD +V
Sbjct: 129 ADRNV 133
>gi|297606944|ref|NP_001059250.2| Os07g0237100 [Oryza sativa Japonica Group]
gi|255677625|dbj|BAF21164.2| Os07g0237100 [Oryza sativa Japonica Group]
Length = 204
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+++ELFSE G LK ++YD+ G+S GTA++++ R+ DA++A+K+Y+GV LDG PM+I L
Sbjct: 111 VLFELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIKRYDGVILDGNPMKIDL 170
Query: 61 AADVSVLENTVPRP 74
+ S T P P
Sbjct: 171 IGNNS---ETSPMP 181
>gi|357111105|ref|XP_003557355.1| PREDICTED: RNA and export factor-binding protein 2-like
[Brachypodium distachyon]
Length = 253
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFSE G LK ++YD+ G+S G+A++++ R+ DA+ A+++YNGV LDG+PM+I+L
Sbjct: 103 VQELFSEVGELKRYSVNYDKDGKSQGSAEVVFARKVDALDAIERYNGVLLDGKPMEIELV 162
Query: 62 ADVSVLENTVP 72
S +T P
Sbjct: 163 GSKSEPPSTAP 173
>gi|325187566|emb|CCA22104.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 247
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF G + A++ YDRSGRS G A + + RRSDA KA+KQY+G LDG+PMQI L
Sbjct: 146 VRELFGTVGQVTKAEIVYDRSGRSKGVARVWFGRRSDAEKAIKQYDGRTLDGQPMQIALD 205
Query: 62 ADVSVLE 68
D +V E
Sbjct: 206 NDTNVRE 212
>gi|414588875|tpg|DAA39446.1| TPA: RNA and export factor-binding protein 2 [Zea mays]
Length = 250
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFSE G LK ++YD+ GRS GTA++++ R+ DA+ A+K+YNGV LDG+PM ++L
Sbjct: 100 VQELFSEVGELKRYSMNYDKDGRSKGTAEVVFARKVDALDAIKRYNGVLLDGKPMNLEL 158
>gi|46982390|gb|AAT08172.1| Hin19 [Nicotiana tabacum]
Length = 219
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G L +HYD++GR G A++++ RRSDA +A K+YN V LDG+PM+I++
Sbjct: 56 IRELFSEIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQAHKRYNNVQLDGKPMKIEVV 115
Query: 62 A 62
A
Sbjct: 116 A 116
>gi|147860765|emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]
Length = 348
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G +K +HY+++GR G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 141 IRELFSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEI 199
>gi|225453197|ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
gi|296087136|emb|CBI33510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G +K +HY+++GR G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 112 IRELFSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEI 170
>gi|326499215|dbj|BAK06098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
ELFSE G LK ++YD+ G+S G+A++++ R+ DA+ A+++YNGV LDG+PM+I+L +
Sbjct: 166 ELFSEIGELKRYSVNYDKDGKSQGSAEVVFARKVDALDAIERYNGVLLDGKPMKIELIGN 225
Query: 64 VSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
T P P AS Y N T + RGG
Sbjct: 226 -----KTEPHPTEPLMYNSASSNY-NATPNSLHQRGG 256
>gi|224113443|ref|XP_002332576.1| predicted protein [Populus trichocarpa]
gi|222832914|gb|EEE71391.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
LFSE G L LHYD SGRS GTA++++ R++DA+ A+++YN V LDG+P++I+L
Sbjct: 31 LFSEVGELLRYSLHYDMSGRSKGTAEVVFSRQTDALAAIRRYNNVQLDGKPLKIELV 87
>gi|33146678|dbj|BAC80073.1| putative RNA and export factor binding protein [Oryza sativa
Japonica Group]
Length = 323
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFSE G LK ++YD+ G+S GTA++++ R+ DA++A+K+Y+GV LDG PM+I L
Sbjct: 155 VQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIKRYDGVILDGNPMKIDLI 214
Query: 62 ADVSVLENTVPRP 74
+ S T P P
Sbjct: 215 GNNS---ETSPMP 224
>gi|222636721|gb|EEE66853.1| hypothetical protein OsJ_23644 [Oryza sativa Japonica Group]
Length = 194
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFSE G LK ++YD+ G+S GTA++++ R+ DA++A+K+Y+GV LDG PM+I L
Sbjct: 102 VQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIKRYDGVILDGNPMKIDLI 161
Query: 62 ADVSVLENTVPRP 74
+ S T P P
Sbjct: 162 GNNS---ETSPMP 171
>gi|218199342|gb|EEC81769.1| hypothetical protein OsI_25456 [Oryza sativa Indica Group]
Length = 336
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFSE G LK ++YD+ G+S GTA++++ R+ DA++A+K+Y+GV LDG PM+I L
Sbjct: 106 VQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIKRYDGVILDGNPMKIDLI 165
Query: 62 ADVSVLENTVPRP 74
+ S T P P
Sbjct: 166 GNNS---ETSPMP 175
>gi|452821093|gb|EME28127.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 215
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 48/62 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I +LFSE G ++ A + +DR+GRS G A +++ R+ A++A+K+YNGVPLDG+PM++ L
Sbjct: 106 INDLFSEVGKMRQAFVKFDRNGRSTGIAQVVFYDRASALEAIKRYNGVPLDGKPMKLSLV 165
Query: 62 AD 63
++
Sbjct: 166 SN 167
>gi|212722820|ref|NP_001132074.1| uncharacterized protein LOC100193488 [Zea mays]
gi|194693354|gb|ACF80761.1| unknown [Zea mays]
gi|195640536|gb|ACG39736.1| THO complex subunit 4 [Zea mays]
gi|414884084|tpg|DAA60098.1| TPA: THO complex subunit 4 isoform 1 [Zea mays]
gi|414884085|tpg|DAA60099.1| TPA: THO complex subunit 4 isoform 2 [Zea mays]
Length = 249
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFSE G LK ++YD+ GRS GT ++++ R+ DA+ A+K+YNGV LDG+PM ++L
Sbjct: 99 VQELFSEVGELKRYSMNYDKDGRSKGTVEVVFARKVDALDAIKRYNGVLLDGKPMNLEL 157
>gi|326507090|dbj|BAJ95622.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 260
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G ++ ++YD+SGRS GTA++++ RS A+ A+K+YN V LDG+PM+I++
Sbjct: 104 IKELFSEMGDIQRYSINYDKSGRSKGTAEVVFSARSSAVAALKKYNNVHLDGKPMKIEV 162
>gi|156364503|ref|XP_001626387.1| predicted protein [Nematostella vectensis]
gi|156213261|gb|EDO34287.1| predicted protein [Nematostella vectensis]
Length = 169
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
I ELFSEFG +K + +HYD SGRS GTA +++ +R +A +A+KQYNGVPLDG
Sbjct: 109 ISELFSEFGQVKRSCVHYDASGRSHGTAKVVFVKRKNAQQALKQYNGVPLDGE 161
>gi|413922290|gb|AFW62222.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 184
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYD GR GTA++++ RRSDAI A+K+YN V LDG+ M+I++
Sbjct: 96 IKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVI 155
Query: 62 AD 63
+
Sbjct: 156 GN 157
>gi|148664444|gb|EDK96860.1| mCG1031583 [Mus musculus]
Length = 126
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 13 KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVSVLENTVP 72
K + ++YDRSGRSLGTA L +ER++D +KAM+QYNG LDG PM IQL V+ +T
Sbjct: 1 KKSAVYYDRSGRSLGTAHLHFERKADGLKAMRQYNGASLDGCPMNIQL---VTSQIDTQR 57
Query: 73 RPVARGGRGG 82
RP GG
Sbjct: 58 RPAQSRKSGG 67
>gi|301091123|ref|XP_002895753.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096665|gb|EEY54717.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 207
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF G + ++ YDRSGRS G A + + RRSDA KA+KQY+G LDG+PMQI L
Sbjct: 68 VRELFGTVGEVSKTEIVYDRSGRSKGIARVWFARRSDADKAIKQYDGRTLDGQPMQIALD 127
Query: 62 ADVSV 66
+D +V
Sbjct: 128 SDKNV 132
>gi|224098361|ref|XP_002311157.1| predicted protein [Populus trichocarpa]
gi|222850977|gb|EEE88524.1| predicted protein [Populus trichocarpa]
Length = 132
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
+FSE G L LHYD SGRS GTA++++ ++DA+ A+K+YN V LDG+P++I+L D
Sbjct: 4 IFSEVGDLLRCSLHYDMSGRSKGTAEVVFALQTDALAAIKRYNNVQLDGKPLKIELVGD 62
>gi|359486823|ref|XP_002279224.2| PREDICTED: THO complex subunit 4 [Vitis vinifera]
Length = 84
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYD+SG S GT ++++ R++DA+ A+K+YN V LDG+P +I L
Sbjct: 21 IKELFSEVGELKQYSIHYDKSGISKGTGEVVFLRQTDALAAIKRYNNVQLDGKPQKIDL 79
>gi|296086266|emb|CBI31707.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYD+SG S GT ++++ R++DA+ A+K+YN V LDG+P +I L
Sbjct: 97 IKELFSEVGELKQYSIHYDKSGISKGTGEVVFLRQTDALAAIKRYNNVQLDGKPQKIDL 155
>gi|357124609|ref|XP_003563990.1| PREDICTED: uncharacterized protein LOC100841511 [Brachypodium
distachyon]
Length = 311
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ-- 59
+ ELFSE G LK +HYD + R G+A++I+ RRS+A++A+K+YN V LDG+ M+I+
Sbjct: 135 LQELFSEMGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVQALKRYNNVRLDGKEMKIEVI 194
Query: 60 -----LAADVSVLENTVPRPVARGGR 80
LAA + N +P RG R
Sbjct: 195 GANLGLAAVSAPRVNVIPGVKGRGQR 220
>gi|226531320|ref|NP_001146561.1| hypothetical protein [Zea mays]
gi|219887809|gb|ACL54279.1| unknown [Zea mays]
gi|413922291|gb|AFW62223.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 269
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYD GR GTA++++ RRSDAI A+K+YN V LDG+ M+I++
Sbjct: 96 IKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVI 155
Query: 62 AD 63
+
Sbjct: 156 GN 157
>gi|413922292|gb|AFW62224.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
gi|413922293|gb|AFW62225.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 272
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYD GR GTA++++ RRSDAI A+K+YN V LDG+ M+I++
Sbjct: 96 IKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVI 155
Query: 62 AD 63
+
Sbjct: 156 GN 157
>gi|413922288|gb|AFW62220.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 226
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELFSE G LK +HYD GR GTA++++ RRSDAI A+K+YN V LDG+ M+I++
Sbjct: 50 IKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVI 109
Query: 62 AD 63
+
Sbjct: 110 GN 111
>gi|224112811|ref|XP_002316299.1| predicted protein [Populus trichocarpa]
gi|222865339|gb|EEF02470.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I LFSE G L LHYD SGRS GTA++++ R++DA+ A+++YN V LDG+P++I+L
Sbjct: 101 IKVLFSEVGELLRYSLHYDMSGRSKGTAEVVFSRQTDALAAIRRYNNVQLDGKPLKIELV 160
>gi|242081501|ref|XP_002445519.1| hypothetical protein SORBIDRAFT_07g020860 [Sorghum bicolor]
gi|241941869|gb|EES15014.1| hypothetical protein SORBIDRAFT_07g020860 [Sorghum bicolor]
Length = 272
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +HYD GR GTA++++ RRSDAI A+K+YN V LDG+ M+I++
Sbjct: 96 IKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEV 154
>gi|384484326|gb|EIE76506.1| hypothetical protein RO3G_01210 [Rhizopus delemar RA 99-880]
Length = 242
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFS GP++ A+L YDRSGRS G A + Y SDA KA+K+++ V LDG+PM+I+++
Sbjct: 120 VLELFSTVGPVEKARLFYDRSGRSTGQAKVKYASSSDADKAIKKFDNVELDGQPMKIEIS 179
>gi|313224640|emb|CBY20431.1| unnamed protein product [Oikopleura dioica]
Length = 248
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELF+EFG LK +++ YDRSGRS G A++ + R +DA AM+ YN VPLDGR M I L+
Sbjct: 117 ELFAEFGALKKSQILYDRSGRSTGQAEVEFVRLADARTAMETYNQVPLDGRAMNITLS 174
>gi|313224645|emb|CBY20436.1| unnamed protein product [Oikopleura dioica]
Length = 248
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELF+EFG LK +++ YDRSGRS G A++ + R +DA AM+ YN VPLDGR M I L+
Sbjct: 117 ELFAEFGALKKSQILYDRSGRSTGQAEVEFVRLADARTAMETYNQVPLDGRAMNITLS 174
>gi|384246743|gb|EIE20232.1| hypothetical protein COCSUDRAFT_48657 [Coccomyxa subellipsoidea
C-169]
Length = 2303
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF G +K A +H+DRSGRS G A+++YE ++DA+KA Q++ V LDG+ M I+L
Sbjct: 153 IKELFESCGKVKYAGIHWDRSGRSTGEAEVVYENKADALKAKSQFDNVALDGQAMSIEL 211
>gi|115476498|ref|NP_001061845.1| Os08g0427900 [Oryza sativa Japonica Group]
gi|38175495|dbj|BAD01191.1| putative transcriptional coactivator(DIP2) [Oryza sativa Japonica
Group]
gi|38175772|dbj|BAD01466.1| putative transcriptional coactivator(DIP2) [Oryza sativa Japonica
Group]
gi|113623814|dbj|BAF23759.1| Os08g0427900 [Oryza sativa Japonica Group]
Length = 286
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +H+D GR GTA++++ RRSDAI A+K+YN V LDG+ M+I++
Sbjct: 106 IKELFSEVGHLKRFAVHFDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEV 164
>gi|357503111|ref|XP_003621844.1| THO complex subunit [Medicago truncatula]
gi|355496859|gb|AES78062.1| THO complex subunit [Medicago truncatula]
Length = 315
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 47/60 (78%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I+ LFSE G L+S +HYD+ GRS GTA++++ R+S+A+ A+K+YN + LDG+ +QI+L
Sbjct: 91 IHLLFSEEGELESYSIHYDQFGRSKGTAEVVFTRQSEALAALKRYNNMKLDGKTLQIELV 150
>gi|218201182|gb|EEC83609.1| hypothetical protein OsI_29305 [Oryza sativa Indica Group]
gi|222640591|gb|EEE68723.1| hypothetical protein OsJ_27390 [Oryza sativa Japonica Group]
Length = 274
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +H+D GR GTA++++ RRSDAI A+K+YN V LDG+ M+I++
Sbjct: 94 IKELFSEVGHLKRFAVHFDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEV 152
>gi|242095380|ref|XP_002438180.1| hypothetical protein SORBIDRAFT_10g009240 [Sorghum bicolor]
gi|241916403|gb|EER89547.1| hypothetical protein SORBIDRAFT_10g009240 [Sorghum bicolor]
Length = 307
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ-L 60
I ELFSE G LK +HYD G+A++I+ RRS+A+ A+K+YN V LDG+ M+I+ +
Sbjct: 124 IQELFSEMGHLKHCAVHYDSYRHPTGSAEVIFTRRSEALAALKRYNNVRLDGKAMKIEVI 183
Query: 61 AADVSVLENTVPR 73
AD+ + PR
Sbjct: 184 GADLGLSSAAAPR 196
>gi|302836664|ref|XP_002949892.1| hypothetical protein VOLCADRAFT_90392 [Volvox carteri f.
nagariensis]
gi|300264801|gb|EFJ48995.1| hypothetical protein VOLCADRAFT_90392 [Volvox carteri f.
nagariensis]
Length = 343
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFS G +KS ++YD SGRSLG+ +++E R++A A K+Y+GV LDGRPM+I A
Sbjct: 190 LLELFSTCGTVKSKAINYDNSGRSLGSGWVVFETRAEAEAAKKEYHGVKLDGRPMEITFA 249
>gi|224106515|ref|XP_002314192.1| predicted protein [Populus trichocarpa]
gi|222850600|gb|EEE88147.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
F G LK +HYDRSGRS GTA++++ R ++A+ A+K+YN V LD +PM+I++A
Sbjct: 33 FRNLGELKRYSIHYDRSGRSKGTAEVVFIRPAEAVVAVKRYNKVQLDEKPMKIEIAG--- 89
Query: 66 VLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
N P A+ G NG + R RGG
Sbjct: 90 --TNFAPH------HANAAFGNSNGLSGRVRSRGG 116
>gi|357147822|ref|XP_003574500.1| PREDICTED: uncharacterized protein LOC100821328 [Brachypodium
distachyon]
Length = 270
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFSE G LK +H+D G GTA++++ RRSDA+ A+K+YN V LDG+ M+I++
Sbjct: 96 IKELFSEVGHLKRFAVHFDGYGHQNGTAEVVFTRRSDAVAALKRYNNVLLDGKAMKIEV 154
>gi|328768986|gb|EGF79031.1| hypothetical protein BATDEDRAFT_90004 [Batrachochytrium
dendrobatidis JAM81]
Length = 168
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFS GPL+SA+L+Y+ G+S G+A +I+ + DA KA +YN LD RPM+I+L
Sbjct: 29 VRELFSRIGPLRSAQLNYNSEGKSKGSATVIFNKHGDASKAFAEYNNRTLDERPMKIEL 87
>gi|40644804|emb|CAE53910.1| putative DIP2 protein [Triticum aestivum]
Length = 259
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL- 60
+ ELFSE G LK+ +HYD + G+A++I+ RRS+A++A+K+YN V LDG+ M+ ++
Sbjct: 131 LQELFSEMGHLKNCIVHYDNNRHPTGSAEVIFTRRSEAVQALKRYNNVRLDGKEMRREMI 190
Query: 61 AADVSVLENTVPR-PVARGGRG 81
A++ + PR V G RG
Sbjct: 191 GANLGLAAAPAPRVNVVSGARG 212
>gi|303288876|ref|XP_003063726.1| RNA binding protein [Micromonas pusilla CCMP1545]
gi|226454794|gb|EEH52099.1| RNA binding protein [Micromonas pusilla CCMP1545]
Length = 280
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ ELF + G +K A L++D +GRS GTA++I+ + A KA++ YNGV LDGRP++I+
Sbjct: 105 VKELFQQVGAVKKAGLNFDENGRSKGTAEIIFASPASAQKAIQTYNGVKLDGRPLKIE 162
>gi|195472401|ref|XP_002088489.1| GE12174 [Drosophila yakuba]
gi|194174590|gb|EDW88201.1| GE12174 [Drosophila yakuba]
Length = 249
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+E G ++ +HYDR G SLGTA L+ + R+DA+K +KQ++GV LDGR +++ L
Sbjct: 83 IMELFNESGLVQQGLVHYDREGNSLGTAQLMCKYRADAMKIIKQFHGVFLDGRRLKLHL 141
>gi|66809087|ref|XP_638266.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466704|gb|EAL64755.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 327
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
LF G +K K+HYD SGRS GT +IY R +DA+ A+K+YNG LDGR ++I
Sbjct: 260 LFDSLGEIKQIKIHYDHSGRSDGTGYVIYSRHNDAMAALKKYNGAQLDGRTLKI 313
>gi|215706378|dbj|BAG93234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 9 FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ-LAADVSVL 67
G LK +HYD + R G+A++I+ RRS+A+ A+K+YN V LDG+PM+I+ + AD+ +
Sbjct: 1 MGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVAALKRYNNVRLDGKPMKIEVIGADLGMA 60
Query: 68 ENTVPR-PVARGGRG 81
+ PR V G RG
Sbjct: 61 APSAPRVSVVPGARG 75
>gi|195626448|gb|ACG35054.1| THO complex subunit 4 [Zea mays]
Length = 306
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ-L 60
+ ELFSE G LK +HYD G+A++I+ RRS+A+ A+K+YN + LDG+ M+I+ +
Sbjct: 125 LQELFSEMGHLKHCAVHYDSYRHPTGSAEVIFTRRSEALAALKRYNNMRLDGKAMKIEVI 184
Query: 61 AADVSVLENTVPR 73
A++ + VP+
Sbjct: 185 GAELGLSAAAVPQ 197
>gi|226505148|ref|NP_001146734.1| uncharacterized protein LOC100280336 [Zea mays]
gi|194704900|gb|ACF86534.1| unknown [Zea mays]
gi|219888533|gb|ACL54641.1| unknown [Zea mays]
gi|413944317|gb|AFW76966.1| THO complex subunit 4 [Zea mays]
Length = 306
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ-L 60
+ ELFSE G LK +HYD G+A++I+ RRS+A+ A+K+YN + LDG+ M+I+ +
Sbjct: 125 LQELFSEMGHLKHCAVHYDSYRHPTGSAEVIFTRRSEALAALKRYNNMRLDGKAMKIEVI 184
Query: 61 AADVSVLENTVPR 73
A++ + VP+
Sbjct: 185 GAELGLSAAAVPQ 197
>gi|195351085|ref|XP_002042067.1| GM26087 [Drosophila sechellia]
gi|194123891|gb|EDW45934.1| GM26087 [Drosophila sechellia]
Length = 207
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++ G ++ A +HYDR+G SLGTA L ++ R DA + ++Q++GV LDGR +++ L
Sbjct: 91 IMELFNQDGLVEKALVHYDRNGNSLGTAQLSFKFREDAFQIIRQFHGVRLDGRRLKLHLV 150
Query: 62 A--------DVSVLENTVPRPVARGGRGGA--SGGYRNGTAPTYRPR 98
++ L + + R R G+ S YR G ++ PR
Sbjct: 151 RNTRNFRRPEIEDLSSQIGSFQTRSMRNGSQKSRSYRKG---SFHPR 194
>gi|159481074|ref|XP_001698607.1| RNA export factor [Chlamydomonas reinhardtii]
gi|158282347|gb|EDP08100.1| RNA export factor [Chlamydomonas reinhardtii]
Length = 137
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELFS G +K+ +++D SGRSLG+ +++E R++A+ A K+YNGV LDG+ M+I
Sbjct: 59 VLELFSTLGAVKNHGVNFDASGRSLGSGFVVFETRAEAVAAKKEYNGVKLDGQAMEI 115
>gi|195578775|ref|XP_002079239.1| GD22109 [Drosophila simulans]
gi|194191248|gb|EDX04824.1| GD22109 [Drosophila simulans]
Length = 210
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++ G ++ A +HYDR+G SLGTA L ++ R DA + ++Q++GV LDGR +++ L
Sbjct: 91 IMELFNQDGLVEKALVHYDRNGSSLGTAQLSFKFREDAFQIIRQFHGVRLDGRRLKLHLV 150
Query: 62 ADV 64
+
Sbjct: 151 RNT 153
>gi|399216191|emb|CCF72879.1| unnamed protein product [Babesia microti strain RI]
Length = 164
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ ELFS GP+ + YDR+ RSLGT IYER SDA +AM Q+NG ++G P+ ++
Sbjct: 70 LMELFSSIGPVVKTWIDYDRTDRSLGTGGCIYERESDAKQAMSQFNGRKIEGLPINLE 127
>gi|357157773|ref|XP_003577909.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Brachypodium distachyon]
Length = 236
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I +LFSE G + ++YD+SGRS GTA++++ RS A A+ +YN V LDG+PM+I++
Sbjct: 98 IKDLFSELGEVMRYSINYDKSGRSKGTAEVVFSTRSAARAAVNKYNNVHLDGKPMKIEV 156
>gi|201065923|gb|ACH92371.1| FI06768p [Drosophila melanogaster]
Length = 235
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++ G ++ +HYDR G SLGTA L ++ R +A + ++Q++GV LDGR +++ L
Sbjct: 106 IMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLV 165
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGGLKKT 104
+ + T ++ + +NGT T + G +K+
Sbjct: 166 QNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRSLQNGFQKS 208
>gi|24583933|ref|NP_609574.1| RNA and export factor binding protein 2, isoform A [Drosophila
melanogaster]
gi|386769548|ref|NP_001246007.1| RNA and export factor binding protein 2, isoform B [Drosophila
melanogaster]
gi|386769550|ref|NP_001246008.1| RNA and export factor binding protein 2, isoform C [Drosophila
melanogaster]
gi|7297959|gb|AAF53203.1| RNA and export factor binding protein 2, isoform A [Drosophila
melanogaster]
gi|383291465|gb|AFH03681.1| RNA and export factor binding protein 2, isoform B [Drosophila
melanogaster]
gi|383291466|gb|AFH03682.1| RNA and export factor binding protein 2, isoform C [Drosophila
melanogaster]
Length = 220
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++ G ++ +HYDR G SLGTA L ++ R +A + ++Q++GV LDGR +++ L
Sbjct: 91 IMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLV 150
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGGLKKT 104
+ + T ++ + +NGT T + G +K+
Sbjct: 151 QNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRSLQNGFQKS 193
>gi|113204845|gb|ABI34156.1| IP02067p [Drosophila melanogaster]
Length = 220
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++ G ++ +HYDR G SLGTA L ++ R +A + ++Q++GV LDGR +++ L
Sbjct: 91 IMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLV 150
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGGLKKT 104
+ + T ++ + +NGT T + G +K+
Sbjct: 151 QNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRSLQNGFQKS 193
>gi|167538131|ref|XP_001750731.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770755|gb|EDQ84436.1| predicted protein [Monosiga brevicollis MX1]
Length = 218
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF + G L++ ++YDRSGRS GTA++I++ + A A + YN V LDG+P+QI+L
Sbjct: 29 LRELFGKHGALRACNMNYDRSGRSQGTAEVIFQSAASARAAYEAYNQVLLDGKPLQIELV 88
Query: 62 AD------VSVLENTVPRPVARGGR 80
AD +V+ + +P A GGR
Sbjct: 89 ADDNALASAAVMSTMMAQPAA-GGR 112
>gi|22859166|emb|CAD30681.1| RNA and export factor binding protein 2 [Drosophila melanogaster]
Length = 220
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++ G ++ +HYDR G SLGTA L ++ R +A + ++Q++GV LDGR +++ L
Sbjct: 91 IMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLV 150
Query: 62 ADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGGLKKT 104
+ + T ++ + +NGT T + G +K+
Sbjct: 151 QNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRSLQNGFQKS 193
>gi|395327407|gb|EJF59807.1| hypothetical protein DICSQDRAFT_88921 [Dichomitus squalens LYAD-421
SS1]
Length = 217
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 1 MIYELFS-EFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQI 58
+ ELF+ GPLK LHYD GRS G A + + RR D KA +QYN +DG RPM+I
Sbjct: 78 QVKELFTATVGPLKDVTLHYDSQGRSKGVAAVHFSRRGDGTKAFQQYNNRLIDGKRPMKI 137
Query: 59 QLAADVS 65
++ D S
Sbjct: 138 EIVVDPS 144
>gi|449544426|gb|EMD35399.1| hypothetical protein CERSUDRAFT_116173 [Ceriporiopsis subvermispora
B]
Length = 219
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELF + GPL+ LHYD GRS G A + ++RR D KA +QYN +DG RPM+I+
Sbjct: 81 VKELFHTTVGPLRDVTLHYDAQGRSKGVAAVHFQRRGDGTKAFQQYNNRLIDGKRPMKIE 140
Query: 60 LAADVSVLENTVPRPVA 76
+ V++ T P P A
Sbjct: 141 I-----VVDPTRPAPAA 152
>gi|194861136|ref|XP_001969722.1| GG10249 [Drosophila erecta]
gi|190661589|gb|EDV58781.1| GG10249 [Drosophila erecta]
Length = 222
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+E G ++ +HYDR G SLGTA L+ R+DA+ ++Q++GV +DGR ++I L
Sbjct: 87 IMELFNENGLVEKGFVHYDRDGNSLGTAQLMCRYRADAMMIIRQFHGVHVDGRRLKIHL 145
>gi|242216554|ref|XP_002474084.1| predicted protein [Postia placenta Mad-698-R]
gi|220726816|gb|EED80754.1| predicted protein [Postia placenta Mad-698-R]
Length = 208
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELF + GPL+ LHYD GRS G A + ++RR D KA +QYN +DG RPM+I+
Sbjct: 78 VKELFHTTVGPLRDVTLHYDSQGRSKGVAAVQFQRRGDGTKAFQQYNNRLIDGKRPMKIE 137
Query: 60 LAAD 63
+ D
Sbjct: 138 IVVD 141
>gi|302804362|ref|XP_002983933.1| hypothetical protein SELMODRAFT_119349 [Selaginella
moellendorffii]
gi|300148285|gb|EFJ14945.1| hypothetical protein SELMODRAFT_119349 [Selaginella
moellendorffii]
Length = 85
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFSE G LKS ++H D+ G S GTA++++ RRSDA +A K YN V L + ++I++A
Sbjct: 28 ELFSEIGELKSWRVHRDKLGNSRGTAEVVFARRSDAERAKKLYNNVMLGIKRLRIEIA 85
>gi|412991324|emb|CCO16169.1| THO complex subunit 4 [Bathycoccus prasinos]
Length = 204
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
+LFS LK + L+Y +G+S G+ ++I+ R+DA+ AM++Y+G+ LDGR +Q+++ A
Sbjct: 20 DLFSTVARLKKSSLNYGPNGKSKGSGEVIFFNRADALAAMREYSGMKLDGRELQLEIIAT 79
Query: 64 VSVLENTVPRPVARGGRGG 82
+V +P GRGG
Sbjct: 80 SNVGLAPLPIQARLSGRGG 98
>gi|367019886|ref|XP_003659228.1| hypothetical protein MYCTH_2055144 [Myceliophthora thermophila ATCC
42464]
gi|347006495|gb|AEO53983.1| hypothetical protein MYCTH_2055144 [Myceliophthora thermophila ATCC
42464]
Length = 351
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 43/59 (72%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +LFS GPL S ++ YDR+GRS GTA + YE R DA++A+++Y+G G+P+++ L
Sbjct: 101 LEDLFSRIGPLISLEMKYDRAGRSEGTAFVTYESRRDALQAIREYDGANAAGQPIRLTL 159
>gi|393243627|gb|EJD51141.1| hypothetical protein AURDEDRAFT_111799 [Auricularia delicata
TFB-10046 SS5]
Length = 257
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
I ELFS GPLK LH+D+ G+S G A + + R+ D KA QYN +DG RPM+I+
Sbjct: 92 IKELFSTTVGPLKEVNLHFDQHGKSKGVAHVQFSRKGDGTKAYNQYNHRLIDGKRPMKIE 151
Query: 60 LAAD 63
+ D
Sbjct: 152 IIVD 155
>gi|384490751|gb|EIE81973.1| hypothetical protein RO3G_06678 [Rhizopus delemar RA 99-880]
Length = 477
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+Y+LF + G L+ A LH +G+S G AD+++ +DA +A YN V LDGRPM I A
Sbjct: 74 LYDLFGQIGSLRRAFLHIGPNGKSAGVADVVFVNSNDAERARVTYNNVQLDGRPMHITTA 133
Query: 62 ADVSVLENTV---PRP 74
+ +S + + PRP
Sbjct: 134 SILSNVSTSTGSGPRP 149
>gi|336375591|gb|EGO03927.1| hypothetical protein SERLA73DRAFT_175623 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388707|gb|EGO29851.1| hypothetical protein SERLADRAFT_458167 [Serpula lacrymans var.
lacrymans S7.9]
Length = 223
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MIYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQI 58
I ELF S G L+ LHYD +GRS G A + ++R+ D KA +QYN +DG RPM+I
Sbjct: 83 QIKELFHSTVGALREVTLHYDSAGRSKGVAAVHFQRKGDGTKAYQQYNNRLIDGKRPMKI 142
Query: 59 QLAAD 63
++ D
Sbjct: 143 EIVVD 147
>gi|409076986|gb|EKM77354.1| hypothetical protein AGABI1DRAFT_115275 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426195330|gb|EKV45260.1| hypothetical protein AGABI2DRAFT_194237 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
I ELF S GP K L+YD SGRS G A + + ++ DA +A QY+ +DG RPM+I+
Sbjct: 84 IKELFASTVGPTKEVHLNYDASGRSKGIAAVTFSKKGDANRAYTQYHNRLIDGKRPMKIE 143
Query: 60 LAAD----VSVLENTVPRPVARG 78
+ D VS+ P PV+ G
Sbjct: 144 IVFDPSRSVSLASRVAPAPVSNG 166
>gi|322707020|gb|EFY98599.1| RNA binding domain-containing protein [Metarhizium anisopliae ARSEF
23]
Length = 339
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
ELF+ G + L YDR+GRS G A + YE+R DA +A+KQ++G +G+P+++ L
Sbjct: 137 ELFARIGRVSKLNLRYDRAGRSEGVAYVTYEQREDAEEAIKQFDGANANGQPIRLTLLPS 196
Query: 64 VSVLENTVP--RPVARGGRGGASGGYRNGTAPTYR 96
+ + V RP+A R A GG T+P R
Sbjct: 197 RNPFDTAVMPGRPLAE--RISAPGGRARSTSPRRR 229
>gi|259489920|ref|NP_001158978.1| RNA and export factor-binding protein 2 [Zea mays]
gi|195617784|gb|ACG30722.1| RNA and export factor-binding protein 2 [Zea mays]
Length = 136
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 37/44 (84%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++YD+ GRS GTA++++ R+ DA+ A+K+YNGV LDG+PM ++L
Sbjct: 1 MNYDKDGRSKGTAEVVFARKVDALDAIKRYNGVLLDGKPMNLEL 44
>gi|169851299|ref|XP_001832340.1| RNA annealing factor [Coprinopsis cinerea okayama7#130]
gi|116506606|gb|EAU89501.1| RNA annealing factor [Coprinopsis cinerea okayama7#130]
Length = 229
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELF S GPL+ LHYD +G+S G A + + R+ DA KA QYN +DG RPM+I+
Sbjct: 89 VKELFASTVGPLRDVTLHYDANGKSKGVAAVHFSRKGDANKAYTQYNNRLIDGKRPMKIE 148
Query: 60 LAAD 63
+ D
Sbjct: 149 IVVD 152
>gi|322701005|gb|EFY92756.1| RNA binding protein, putative [Metarhizium acridum CQMa 102]
Length = 365
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
ELF+ G + L YDR+GRS G A + YE+R DA +A+KQ++G +G+P+++ L
Sbjct: 161 ELFARIGRVSRLNLRYDRAGRSEGVAYVTYEQREDAEEAIKQFDGANANGQPIRLTLLPS 220
Query: 64 VSVLENTVP--RPVARGGRGGASGGYRNGTAPTYR 96
+ + V RP+A +GG T+P R
Sbjct: 221 RNPFDTAVMPGRPLAERISAPGAGGRARSTSPRRR 255
>gi|328874187|gb|EGG22553.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 348
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++F G +KS +++DRSGRS GTA ++Y R+ A +A++ Y LDG+PM + L
Sbjct: 289 LIQIFQRVGEVKSLNINFDRSGRSDGTATIVYSHRNSADEAVRTYQNALLDGKPMIVHL 347
>gi|308811130|ref|XP_003082873.1| THOC4_HUMAN THO complex subunit 4 (ISS) [Ostreococcus tauri]
gi|116054751|emb|CAL56828.1| THOC4_HUMAN THO complex subunit 4 (ISS) [Ostreococcus tauri]
Length = 276
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
I ELFS+ G + SA ++Y +G+S GTA++ A+KA+ YNGV LDGRP+QI
Sbjct: 125 IAELFSQVGRVLSAGVNYGPNGKSKGTAEVTLATLDSAMKAVSTYNGVKLDGRPLQI 181
>gi|326437919|gb|EGD83489.1| hypothetical protein PTSG_04097 [Salpingoeca sp. ATCC 50818]
Length = 281
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I +LF G L +HYDR+GRSLG A++ + R DA A+++YNG LD +PM++
Sbjct: 102 IEQLFGAIGQLVDYSIHYDRAGRSLGVAEVEFARSKDAAAAVEEYNGRYLDTKPMKVSF 160
>gi|296816745|ref|XP_002848709.1| RNA binding domain-containing protein [Arthroderma otae CBS 113480]
gi|238839162|gb|EEQ28824.1| RNA binding domain-containing protein [Arthroderma otae CBS 113480]
Length = 333
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF+ GP+ S L YDR+GRS G A + Y+R SDA A+++++G G+P+++
Sbjct: 116 LEELFTRIGPVHSVSLLYDRAGRSEGVAFVTYKRLSDAQTAIQEFDGANAKGQPIRL--- 172
Query: 62 ADVSVLENTVPR 73
S++ NT PR
Sbjct: 173 ---SLVTNTAPR 181
>gi|358391435|gb|EHK40839.1| hypothetical protein TRIATDRAFT_28798 [Trichoderma atroviride IMI
206040]
Length = 326
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF GP+ +L YDRSGRS G A + YE + DA +A+KQ++G +G+P+++
Sbjct: 105 LDELFRRIGPISKLQLRYDRSGRSEGVAFVTYEDKEDAAEAIKQFDGANANGQPIRL 161
>gi|340520210|gb|EGR50447.1| predicted protein [Trichoderma reesei QM6a]
Length = 323
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP+ +L YDRSGRS G A + YE SDA +A++Q++G +G+P+++ +
Sbjct: 105 LDELFRRIGPITKLQLRYDRSGRSEGVAFVTYESSSDAAEAVRQFDGANANGQPIRLTI 163
>gi|414884082|tpg|DAA60096.1| TPA: hypothetical protein ZEAMMB73_204647 [Zea mays]
gi|414884083|tpg|DAA60097.1| TPA: hypothetical protein ZEAMMB73_204647 [Zea mays]
Length = 136
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 36/44 (81%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++YD+ GRS GT ++++ R+ DA+ A+K+YNGV LDG+PM ++L
Sbjct: 1 MNYDKDGRSKGTVEVVFARKVDALDAIKRYNGVLLDGKPMNLEL 44
>gi|315049755|ref|XP_003174252.1| RNA binding domain-containing protein [Arthroderma gypseum CBS
118893]
gi|311342219|gb|EFR01422.1| RNA binding domain-containing protein [Arthroderma gypseum CBS
118893]
Length = 328
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF+ GP+ S L YDR+GRS GTA + Y+R SDA A+ +++G G+P+++ L
Sbjct: 103 LEELFTRIGPVHSVALLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQPIRLNL- 161
Query: 62 ADVSVLENTVPR 73
+ N+ PR
Sbjct: 162 -----VTNSAPR 168
>gi|452842907|gb|EME44842.1| hypothetical protein DOTSEDRAFT_70785 [Dothistroma septosporum
NZE10]
Length = 337
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +LF GP S +L YDR+ RSLGTA +IYE DA +A+ +NG +G+P+++QL
Sbjct: 116 LRDLFERIGPTTSVRLLYDRADRSLGTAYVIYEDPRDARQAVDDFNGQMANGQPIRLQL 174
>gi|299116448|emb|CBN76167.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 498
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF+ G L K+ +DR+GRS G A +I++RR DA A+ Q++ LDG PM +++
Sbjct: 124 IKELFAGVGDLLHCKIDFDRTGRSNGNALVIFKRREDAENAVSQFHKRTLDGTPMIVEI 182
>gi|409048162|gb|EKM57640.1| hypothetical protein PHACADRAFT_251375 [Phanerochaete carnosa
HHB-10118-sp]
Length = 220
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
I ELF + GPL+ LHYD G S G A + + R+ D KA +QYN +DG RPM+I+
Sbjct: 77 IRELFQTTVGPLRDVTLHYDNKGASKGVAAVQFSRKGDGTKAYQQYNNRLIDGKRPMKIE 136
Query: 60 LAAD 63
+ D
Sbjct: 137 IVVD 140
>gi|340905027|gb|EGS17395.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 327
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GP+ S L YDR+GRS G A + YE DA++A+K+++G G+P+++ L
Sbjct: 110 LFSRIGPVISVHLKYDRAGRSEGVAFVTYEHHRDAVQAIKEFDGANAAGQPIRLTL 165
>gi|145249628|ref|XP_001401153.1| RNA binding domain protein [Aspergillus niger CBS 513.88]
gi|134081836|emb|CAK42091.1| unnamed protein product [Aspergillus niger]
gi|350639577|gb|EHA27931.1| hypothetical protein ASPNIDRAFT_41873 [Aspergillus niger ATCC 1015]
Length = 251
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F++ GP+K L Y+++G S G A +++ + A KA K NG+ +DGRPM+I++
Sbjct: 82 IKEYFTKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAKDLNGLLVDGRPMKIEV 141
Query: 61 AADVS-VLENTVPRPV 75
D S E + P+P+
Sbjct: 142 VVDASHAPEVSAPKPL 157
>gi|119477755|ref|XP_001259289.1| RNA annealing protein Yra1, putative [Neosartorya fischeri NRRL
181]
gi|119407443|gb|EAW17392.1| RNA annealing protein Yra1, putative [Neosartorya fischeri NRRL
181]
Length = 275
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E FS+ GP+K L Y+++G S G A +++ + A KA K+ NG+ +DGRPM+I++
Sbjct: 82 IKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAKELNGLLVDGRPMKIEV 141
Query: 61 AADVS 65
D S
Sbjct: 142 VVDAS 146
>gi|296416645|ref|XP_002837985.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633880|emb|CAZ82176.1| unnamed protein product [Tuber melanosporum]
Length = 252
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MIYELFSEF-GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
MI E F++ GP+K + Y +G S G A + + R SDA A ++YNGV +D RPM+++
Sbjct: 89 MIKEYFTKVVGPIKRCVITYGPNGHSRGIATVEFSRSSDAATAAQKYNGVEVDRRPMKVE 148
Query: 60 LAAD 63
L D
Sbjct: 149 LVVD 152
>gi|358377715|gb|EHK15398.1| hypothetical protein TRIVIDRAFT_38353 [Trichoderma virens Gv29-8]
Length = 324
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP+ +L YDRSGRS G A + YE + DA +A++Q++G +G+P+++ +
Sbjct: 106 LDELFRRIGPITKLQLRYDRSGRSEGVAFVTYESKDDAAEAVRQFDGANANGQPIRLTV 164
>gi|342890180|gb|EGU89044.1| hypothetical protein FOXB_00456 [Fusarium oxysporum Fo5176]
Length = 317
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP+ +L YDR+GRS GTA + YE + DA +A+KQ++G +G+P+++ L
Sbjct: 103 LDELFRRIGPVVRLQLRYDRAGRSEGTAYVTYELKEDAQEAVKQFDGANANGQPIRLTL 161
>gi|226470070|emb|CAX70316.1| Polymerase delta-interacting protein 3 [Schistosoma japonicum]
Length = 322
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
++ELFS G L+ + G A++IY SDA++A+++YNG LDGRPM++ L
Sbjct: 187 VFELFSSVGSLRLCTVTRP------GQAEVIYNHSSDALEAIERYNGRELDGRPMRVSLT 240
Query: 62 ADVSVLEN 69
VS + N
Sbjct: 241 TPVSEISN 248
>gi|226470072|emb|CAX70317.1| Polymerase delta-interacting protein 3 [Schistosoma japonicum]
gi|226489166|emb|CAX74932.1| Polymerase delta-interacting protein 3 [Schistosoma japonicum]
Length = 322
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
++ELFS G L+ + G A++IY SDA++A+++YNG LDGRPM++ L
Sbjct: 187 VFELFSSVGSLRLCTVTRP------GQAEVIYNHSSDALEAIERYNGRELDGRPMRVSLT 240
Query: 62 ADVSVLEN 69
VS + N
Sbjct: 241 TPVSEISN 248
>gi|326437638|gb|EGD83208.1| hypothetical protein PTSG_03838 [Salpingoeca sp. ATCC 50818]
Length = 245
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF E GPLK + +G A++++ RR DA+KA YN V LDGRPM +Q+
Sbjct: 160 MRELFQECGPLKRVDMP------EVGVAEVVFSRRVDAVKAQTTYNKVKLDGRPMYLQV 212
>gi|226489164|emb|CAX74931.1| Polymerase delta-interacting protein 3 [Schistosoma japonicum]
Length = 322
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
++ELFS G L+ + G A++IY SDA++A+++YNG LDGRPM++ L
Sbjct: 187 VFELFSSVGSLRLCTVTRP------GQAEVIYNHSSDALEAIERYNGRELDGRPMRVSLT 240
Query: 62 ADVSVLEN 69
VS + N
Sbjct: 241 TPVSEISN 248
>gi|313224644|emb|CBY20435.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
+LF EFG +K + ++ G+S G+A++++ R A A QY+GV LDGRPM I + D
Sbjct: 116 DLFEEFGNIKRVSVLFNSHGKSTGSAEIVFRRAEFANDAQAQYDGVLLDGRPMYITVVKD 175
Query: 64 VS 65
S
Sbjct: 176 HS 177
>gi|313224639|emb|CBY20430.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
+LF EFG +K + ++ G+S G+A++++ R A A QY+GV LDGRPM I + D
Sbjct: 116 DLFEEFGNIKRVSVLFNSHGKSTGSAEIVFRRAEFANDAQAQYDGVLLDGRPMYITVVKD 175
Query: 64 VS 65
S
Sbjct: 176 HS 177
>gi|310790792|gb|EFQ26325.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 382
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF+ GP+ L YDR+GRS G A + E R DA++A+K+++G +G+P+++ +
Sbjct: 156 LEELFNRIGPVAKLDLKYDRAGRSEGVAFVTMESREDALEAVKEFDGANANGQPIRLSI 214
>gi|115433510|ref|XP_001216892.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189744|gb|EAU31444.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 322
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 3 YELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAA 62
Y+LFS GP+ + L YDR+GRS G A + Y R SDA A+ +++G G+P++I L +
Sbjct: 100 YDLFSRIGPVSNLTLVYDRAGRSEGVAFVTYSRVSDARTAISEFDGANAKGQPIRITLVS 159
>gi|302505912|ref|XP_003014913.1| hypothetical protein ARB_06670 [Arthroderma benhamiae CBS 112371]
gi|291178484|gb|EFE34273.1| hypothetical protein ARB_06670 [Arthroderma benhamiae CBS 112371]
Length = 236
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
ELF+ GP+ S L YDR+GRS GTA + Y+R SDA A+ +++G G+P+++ L
Sbjct: 13 ELFTRIGPVYSVALLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQPIRLTL 69
>gi|327293694|ref|XP_003231543.1| hypothetical protein TERG_07841 [Trichophyton rubrum CBS 118892]
gi|326466171|gb|EGD91624.1| hypothetical protein TERG_07841 [Trichophyton rubrum CBS 118892]
Length = 338
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF+ GP+ S L YDR+GRS GTA + Y+R SDA A+ +++G G+P+++ L
Sbjct: 112 LEELFTRIGPVYSVSLLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQPIRLTL 170
>gi|358374112|dbj|GAA90706.1| RNA annealing protein Yra1 [Aspergillus kawachii IFO 4308]
Length = 250
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F++ GP+K L Y+++G S G A +++ + A KA K NG+ +DGRPM+I++
Sbjct: 81 IKEYFTKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAKDLNGLLVDGRPMKIEV 140
Query: 61 AADVS-VLENTVPRPV 75
D S E P+P+
Sbjct: 141 VVDASHAPEVPAPKPL 156
>gi|302754628|ref|XP_002960738.1| hypothetical protein SELMODRAFT_402061 [Selaginella
moellendorffii]
gi|300171677|gb|EFJ38277.1| hypothetical protein SELMODRAFT_402061 [Selaginella
moellendorffii]
Length = 395
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYN 47
+ ELFSE G LKS ++H D+ G S GTA++++ RRSDA +A K YN
Sbjct: 26 LQELFSEIGELKSWRVHRDKLGNSRGTAEVVFARRSDAERAKKLYN 71
>gi|302916719|ref|XP_003052170.1| hypothetical protein NECHADRAFT_104111 [Nectria haematococca mpVI
77-13-4]
gi|256733109|gb|EEU46457.1| hypothetical protein NECHADRAFT_104111 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP+ +L YDR+GRS GTA + YE + DA +A++Q++G +G+P+++ L
Sbjct: 103 LDELFRRIGPVVRLQLRYDRAGRSEGTAYVTYELKEDAQEAVRQFDGANANGQPIRLTL 161
>gi|378726418|gb|EHY52877.1| hypothetical protein HMPREF1120_01083 [Exophiala dermatitidis
NIH/UT8656]
Length = 256
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 1 MIYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
I E F++ G +K L Y+++G+S G AD+I+ + A KA K NG+ +D RPM+I+
Sbjct: 80 QIKEYFTKSVGKVKKVSLQYNQNGQSRGIADIIFVKPDSAAKAAKDLNGMLVDKRPMKIE 139
Query: 60 LAADVSVLENTVP 72
+ D S + P
Sbjct: 140 VVVDASHVPEPTP 152
>gi|326469195|gb|EGD93204.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 327
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF+ GP+ S L YDR+GRS GTA + Y+R SDA A+ +++G G+P+++ L
Sbjct: 103 LEELFTRIGPVYSVSLLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQPIRLTL 161
>gi|302675763|ref|XP_003027565.1| hypothetical protein SCHCODRAFT_86069 [Schizophyllum commune H4-8]
gi|300101252|gb|EFI92662.1| hypothetical protein SCHCODRAFT_86069 [Schizophyllum commune H4-8]
Length = 210
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELF + GPL+S +HYD GRS G A + ++R D KA +QYN +DG RPM+++
Sbjct: 71 VKELFATTVGPLRSVMIHYDAGGRSKGIAVVNFQRSGDGNKAYQQYNNRLIDGKRPMKVE 130
Query: 60 LAADVS 65
+ D S
Sbjct: 131 IVFDPS 136
>gi|67541498|ref|XP_664523.1| hypothetical protein AN6919.2 [Aspergillus nidulans FGSC A4]
gi|40738484|gb|EAA57674.1| hypothetical protein AN6919.2 [Aspergillus nidulans FGSC A4]
gi|259480524|tpe|CBF71737.1| TPA: RNA annealing protein Yra1, putative (AFU_orthologue;
AFUA_5G13860) [Aspergillus nidulans FGSC A4]
Length = 458
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E FS+ GP+K L Y+++G S G A +++ A KA K+ NG+ +DGRPM+I++
Sbjct: 79 IKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFREPDTAAKAAKELNGLLVDGRPMKIEV 138
Query: 61 AADVSVLENTVPRP 74
D S TVP P
Sbjct: 139 VVDAS-HAPTVPAP 151
>gi|121714118|ref|XP_001274670.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402823|gb|EAW13244.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 264
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F++ GP+K L Y+++G S G A +++ + A KA K NG+ +DGRPM+I++
Sbjct: 82 IKEYFTKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAKDLNGLLVDGRPMKIEV 141
Query: 61 AADVSVLENTVPRPVARGGR 80
D S +VP P G R
Sbjct: 142 VVDAS-HAPSVPAPKPLGER 160
>gi|326479299|gb|EGE03309.1| RNA binding domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 297
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF+ GP+ S L YDR+GRS GTA + Y+R SDA A+ +++G G+P+++ L
Sbjct: 103 LEELFTRIGPVYSVSLLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQPIRLTL 161
>gi|380487764|emb|CCF37827.1| RNA binding protein [Colletotrichum higginsianum]
Length = 343
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF+ GP+ L YDR+GRS G A + E R DA++A+K+++G +G+P+++ +
Sbjct: 115 LEELFNRIGPVAKLDLKYDRAGRSEGIAFVTMESREDALEAVKEFDGANANGQPIRLSI 173
>gi|453082453|gb|EMF10500.1| hypothetical protein SEPMUDRAFT_127214 [Mycosphaerella populorum
SO2202]
Length = 345
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP S +L YDRS RS GTA ++YE DA A +Y+G P +G+ +++ +
Sbjct: 121 LRELFERVGPTISVRLLYDRSDRSTGTAFVVYEDERDARDAFDKYDGCPANGQAIRLTI 179
>gi|378730459|gb|EHY56918.1| hypothetical protein HMPREF1120_04982 [Exophiala dermatitidis
NIH/UT8656]
Length = 328
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
IY+LF P+ AKL YDR+GRS G A + Y+ +DA A+++++G G+P+++ L
Sbjct: 109 IYDLFERIAPVMDAKLRYDRAGRSEGVAFVTYQHVADARTAIREFDGANAKGQPIRLTL 167
>gi|392561806|gb|EIW54987.1| hypothetical protein TRAVEDRAFT_51115 [Trametes versicolor
FP-101664 SS1]
Length = 134
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 MIYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
+ ELF + GPLK LHYD +GRS G A + ++RR D KA +QYN +DG
Sbjct: 80 QVRELFHTTVGPLKDVTLHYDSAGRSKGVAAIHFQRRGDGTKAYQQYNNRLIDG 133
>gi|148235297|ref|NP_001085979.1| MGC82977 protein [Xenopus laevis]
gi|49118619|gb|AAH73641.1| MGC82977 protein [Xenopus laevis]
Length = 276
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL S + YD R+GRS G A + +ER D+ +AM+ NG+ LDGR +++ +
Sbjct: 130 EVFSRYGPLSSVNVVYDQRTGRSRGFAFVYFERMEDSREAMEHVNGMELDGRKLRVDYS 188
>gi|367043980|ref|XP_003652370.1| hypothetical protein THITE_2113792 [Thielavia terrestris NRRL 8126]
gi|346999632|gb|AEO66034.1| hypothetical protein THITE_2113792 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GPL ++ YDR+GRS GTA + YE DA +A+K+++G G+P+++ L
Sbjct: 104 LFSRIGPLIKLEMKYDRAGRSEGTAFVTYESHRDAAEAIKEFDGANAAGQPIRLTL 159
>gi|83772288|dbj|BAE62418.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 246
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + YER SDA A+ +++G G+P+++ L
Sbjct: 26 LEDLFTRIGPISNLSLVYDRAGRSEGVAFVTYERPSDARTAISEFDGANAKGQPIRVTLV 85
Query: 62 A 62
+
Sbjct: 86 S 86
>gi|256082893|ref|XP_002577686.1| RNA and export factor binding protein [Schistosoma mansoni]
gi|353232783|emb|CCD80139.1| putative rna and export factor binding protein [Schistosoma
mansoni]
Length = 320
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
++ELFS G L+ + G A++IY SDA++A+++YNG LDGRPM++ L
Sbjct: 186 VFELFSSVGSLRLCTVTRP------GQAEVIYNHSSDALEAIERYNGRELDGRPMRVSLT 239
Query: 62 ADVSVL 67
VS L
Sbjct: 240 TPVSDL 245
>gi|326485412|gb|EGE09422.1| RNA binding domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 179
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 10 GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
GP+K L Y+++G S G A +I+ R AIKA K+ NG+ +D RP++I++ D S
Sbjct: 10 GPVKKVMLTYNQNGTSRGIASIIFSRPETAIKAAKELNGLLIDKRPIKIEVVVDAS 65
>gi|317150977|ref|XP_003190476.1| RNA binding domain protein [Aspergillus oryzae RIB40]
Length = 261
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E FS+ GP+K L Y+++G S G A +++ + A KA K NG+ +DGRPM+I++
Sbjct: 80 IKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAKDLNGLLVDGRPMKIEV 139
Query: 61 AADVS 65
D +
Sbjct: 140 VVDAN 144
>gi|296814196|ref|XP_002847435.1| RNA binding domain-containing protein [Arthroderma otae CBS
113480]
gi|238840460|gb|EEQ30122.1| RNA binding domain-containing protein [Arthroderma otae CBS
113480]
Length = 191
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 10 GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
GP+K L Y+++G S G A +I+ R AIKA K+ NG+ +D RP++I++ D S
Sbjct: 17 GPVKKVMLTYNQNGTSRGIASIIFARPETAIKAAKELNGLLIDKRPIKIEVVVDAS 72
>gi|238500285|ref|XP_002381377.1| RNA annealing protein Yra1, putative [Aspergillus flavus NRRL3357]
gi|220693130|gb|EED49476.1| RNA annealing protein Yra1, putative [Aspergillus flavus NRRL3357]
Length = 247
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E FS+ GP+K L Y+++G S G A +++ + A KA K NG+ +DGRPM+I++
Sbjct: 80 IKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAKDLNGLLVDGRPMKIEV 139
Query: 61 AADVS 65
D +
Sbjct: 140 VVDAN 144
>gi|50555463|ref|XP_505140.1| YALI0F07909p [Yarrowia lipolytica]
gi|49651010|emb|CAG77947.1| YALI0F07909p [Yarrowia lipolytica CLIB122]
Length = 221
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL- 60
+Y+LF++ G + ++HYDRSGRSLG A++++ R DA A+ +++G G +++++
Sbjct: 83 LYDLFNKVGRVDDVEIHYDRSGRSLGDANVVFSRPEDAQDAIDKFDGKRAAGLKIEVKID 142
Query: 61 -----AADVSVLENTVPRPVARG-GRGGASGGYR 88
A D+S E PR + GR GGYR
Sbjct: 143 HRRDPALDLS--ERFGPRDRSLSPGRDRPYGGYR 174
>gi|350296162|gb|EGZ77139.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 332
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GPL + YDR+GRS GTA + YE DA +A+++Y+G G+P+++ L
Sbjct: 116 LFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLTL 171
>gi|407921975|gb|EKG15108.1| hypothetical protein MPH_07705 [Macrophomina phaseolina MS6]
Length = 282
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF GP++ AKL YDRS RS G A ++Y +DA A ++++G G+P+ + L
Sbjct: 59 ILELFERIGPVEDAKLVYDRSDRSTGVAFVVYRSLADARVACREFDGANAHGQPIHLSL 117
>gi|336274132|ref|XP_003351820.1| hypothetical protein SMAC_00366 [Sordaria macrospora k-hell]
Length = 309
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD- 63
LFS GPL + YDR+GRS GTA + YE DA +A+++Y+G G+P+++ L
Sbjct: 91 LFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLTLMPSG 150
Query: 64 --VSVLENTV-PRPVA 76
+ E + PRP+A
Sbjct: 151 PRRNPFETAINPRPLA 166
>gi|238495444|ref|XP_002378958.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
gi|220695608|gb|EED51951.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
gi|391872287|gb|EIT81421.1| alpha-actinin, sarcomeric [Aspergillus oryzae 3.042]
Length = 322
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + YER SDA A+ +++G G+P+++ L
Sbjct: 102 LEDLFTRIGPISNLSLVYDRAGRSEGVAFVTYERPSDARTAISEFDGANAKGQPIRVTLV 161
Query: 62 A 62
+
Sbjct: 162 S 162
>gi|85090449|ref|XP_958422.1| hypothetical protein NCU07421 [Neurospora crassa OR74A]
gi|28919783|gb|EAA29186.1| hypothetical protein NCU07421 [Neurospora crassa OR74A]
Length = 332
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GPL + YDR+GRS GTA + YE DA +A+++Y+G G+P+++ L
Sbjct: 116 LFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLTL 171
>gi|336464082|gb|EGO52322.1| hypothetical protein NEUTE1DRAFT_90482 [Neurospora tetrasperma FGSC
2508]
Length = 332
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GPL + YDR+GRS GTA + YE DA +A+++Y+G G+P+++ L
Sbjct: 116 LFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLTL 171
>gi|253761298|ref|XP_002489078.1| hypothetical protein SORBIDRAFT_0120s002030 [Sorghum bicolor]
gi|241947046|gb|EES20191.1| hypothetical protein SORBIDRAFT_0120s002030 [Sorghum bicolor]
Length = 132
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGV 49
ELFS+ G +K ++ DRS RS GTA++I+ RRSDA+ A+K+YN
Sbjct: 85 ELFSDVGHIKRYSINCDRSRRSKGTAEVIFSRRSDALAAVKRYNKC 130
>gi|410901627|ref|XP_003964297.1| PREDICTED: polymerase delta-interacting protein 3-like [Takifugu
rubripes]
Length = 473
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L +G A++++ R+ DA+ A ++YN LDG+PM+ L
Sbjct: 336 IVELFCVCGALKRARLVR------VGVAEVVFVRKEDAVSAYRKYNNRCLDGQPMKCNLH 389
Query: 62 ADVSVLENTVPRPVARGGRGGASGGY-RNGTAPTYRPRG 99
SV+ + P + GAS G ++G + RP G
Sbjct: 390 IQGSVITSDQPILLRLSDTPGASNGTKKDGLPSSSRPSG 428
>gi|317149624|ref|XP_001823550.2| alpha-actinin, sarcomeric (f-actin cross linking protein)
[Aspergillus oryzae RIB40]
Length = 904
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + YER SDA A+ +++G G+P+++ L
Sbjct: 684 LEDLFTRIGPISNLSLVYDRAGRSEGVAFVTYERPSDARTAISEFDGANAKGQPIRVTLV 743
Query: 62 A 62
+
Sbjct: 744 S 744
>gi|116180668|ref|XP_001220183.1| hypothetical protein CHGG_00962 [Chaetomium globosum CBS 148.51]
gi|88185259|gb|EAQ92727.1| hypothetical protein CHGG_00962 [Chaetomium globosum CBS 148.51]
Length = 312
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GP+ + + YDR+GRS GTA + YE DA +A+++Y+G G+P+++ L
Sbjct: 79 LFSRIGPVVTLDMKYDRAGRSEGTAFVTYESPRDAAQAIQEYDGANAAGQPIRLTL 134
>gi|380096102|emb|CCC06149.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 335
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GPL + YDR+GRS GTA + YE DA +A+++Y+G G+P+++ L
Sbjct: 117 LFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLTL 172
>gi|357493017|ref|XP_003616797.1| THO complex subunit 4-A [Medicago truncatula]
gi|355518132|gb|AES99755.1| THO complex subunit 4-A [Medicago truncatula]
Length = 193
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 24 RSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
R +G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 90 RVVGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIV 127
>gi|452984713|gb|EME84470.1| hypothetical protein MYCFIDRAFT_203037 [Pseudocercospora fijiensis
CIRAD86]
Length = 343
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP S +L YDR RS GTA +IYE DA A+ +++G +G+P++I L
Sbjct: 115 LRELFERVGPTLSVRLLYDRQDRSQGTAYVIYEDERDARDALHKFDGQNANGQPIRISL 173
>gi|328860189|gb|EGG09296.1| hypothetical protein MELLADRAFT_71269 [Melampsora larici-populina
98AG31]
Length = 218
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLD-GRPMQIQ 59
I ELFS GP+ L YD G+S GTA + ++R DA KA +QYN +D RPM+++
Sbjct: 88 IRELFSTTVGPVMKVALSYDNRGQSKGTAQVEFKRNDDATKAFQQYNKRLIDQNRPMKVE 147
Query: 60 LAAD 63
+ D
Sbjct: 148 IILD 151
>gi|430812736|emb|CCJ29857.1| unnamed protein product [Pneumocystis jirovecii]
Length = 237
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF + GP+ + YDRSGRS GTA + +ER DA A+ Q+NG G+P+ + L
Sbjct: 104 LFKKIGPVTKLSIKYDRSGRSTGTAYVNFERIEDAHNAINQFNGANAAGQPITLTL 159
>gi|67901438|ref|XP_680975.1| hypothetical protein AN7706.2 [Aspergillus nidulans FGSC A4]
gi|40742031|gb|EAA61221.1| hypothetical protein AN7706.2 [Aspergillus nidulans FGSC A4]
gi|259484052|tpe|CBF79945.1| TPA: RNA binding protein, putative (AFU_orthologue; AFUA_5G08310)
[Aspergillus nidulans FGSC A4]
Length = 328
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFS GP+ + L YDR+GRS G A + Y R +DA A+ +++G G+P++I +
Sbjct: 102 LEELFSRIGPISNVSLVYDRAGRSEGVAYVTYSRYNDAKTAIAEFDGANAKGQPIRISIT 161
Query: 62 A 62
+
Sbjct: 162 S 162
>gi|346322611|gb|EGX92210.1| RNA binding domain protein [Cordyceps militaris CM01]
Length = 285
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
ELF G + +L +DR+GRS G A + YE R DA +A+KQ++G +G+P+++ L
Sbjct: 84 ELFRRIGRVLRLQLKFDRAGRSEGIAFVTYEHRDDADEAVKQFDGANANGQPIRLTLLPS 143
Query: 64 VSVLENTV--PRPVA 76
+ + V RP+A
Sbjct: 144 RNPFDTAVMPSRPLA 158
>gi|402222219|gb|EJU02286.1| hypothetical protein DACRYDRAFT_116014 [Dacryopinax sp. DJM-731
SS1]
Length = 226
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ LFS G L K ++ +DRSGRS G A + YER DA++A ++++G P G+ + I+
Sbjct: 55 LNTLFSSLGALAKPPRIVFDRSGRSTGIAHITYERHEDALRAKQRFDGQPAKGQNISIRF 114
Query: 61 AADVSVLENTVPRPVARGGRGGASGGYRNGTAPT 94
A ++ P + GG G S R G P+
Sbjct: 115 EAALN------PPAASAGGAQGKSLLARIGANPS 142
>gi|398405202|ref|XP_003854067.1| hypothetical protein MYCGRDRAFT_92083 [Zymoseptoria tritici IPO323]
gi|339473950|gb|EGP89043.1| hypothetical protein MYCGRDRAFT_92083 [Zymoseptoria tritici IPO323]
Length = 416
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP+ S +L YDR+ RS GTA +IYE DA A++Q++G +G+ +++ L
Sbjct: 186 LRELFERIGPVASVRLLYDRADRSQGTAFVIYEDPRDASDAVQQFDGQNANGQAIRMTL 244
>gi|392588996|gb|EIW78327.1| hypothetical protein CONPUDRAFT_60913 [Coniophora puteana
RWD-64-598 SS2]
Length = 128
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 MIYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
+ ELF + GPL+ LHYD +GRS G A + ++R+ D KA +QYN +DG
Sbjct: 74 QVKELFHTTVGPLREVTLHYDSAGRSKGVAAIHFQRKGDGTKAYQQYNNRLIDG 127
>gi|255953255|ref|XP_002567380.1| Pc21g03160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589091|emb|CAP95213.1| Pc21g03160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 251
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E FS+ GP++ L Y+++G S G A + + R A KA K+ NG+ +DGRPM+I++
Sbjct: 81 VKEYFSKSAGPVRRVMLTYNQNGTSRGIASIQFTRADTAAKATKELNGLLVDGRPMKIEV 140
Query: 61 AADVS-VLENTVPRPV 75
D S V P+P+
Sbjct: 141 IYDASHVPAAPAPKPL 156
>gi|171687535|ref|XP_001908708.1| hypothetical protein [Podospora anserina S mat+]
gi|170943729|emb|CAP69381.1| unnamed protein product [Podospora anserina S mat+]
Length = 334
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GPL ++ YDR+GRS GTA + Y+ DA +A+K+++G G+P+++ +
Sbjct: 129 LFSSIGPLVKLEMKYDRAGRSEGTAFVTYQSSHDAAQAIKEFDGANAAGQPIRLTM 184
>gi|402083585|gb|EJT78603.1| hypothetical protein GGTG_03702 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 327
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF+ GP++ L YDRSGRS GTA ++YE DA A+K+++G G+P+++ +
Sbjct: 121 LFNGIGPIRELDLVYDRSGRSEGTAYVVYESYKDATLAVKEFDGANAAGQPIRLTI 176
>gi|425767145|gb|EKV05723.1| hypothetical protein PDIP_81630 [Penicillium digitatum Pd1]
gi|425780758|gb|EKV18758.1| hypothetical protein PDIG_07510 [Penicillium digitatum PHI26]
Length = 252
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E F++ GP++ L Y+++G S G A + + R A KA K+ NG+ +DGRPM+I++
Sbjct: 81 VKEYFNKSAGPVRRVMLTYNQNGTSRGIASIQFNRADTAAKATKELNGLLVDGRPMKIEV 140
Query: 61 AADVSVLENTVP 72
D S + TVP
Sbjct: 141 VYDASHVP-TVP 151
>gi|440476103|gb|ELQ44736.1| hypothetical protein OOU_Y34scaffold00058g9 [Magnaporthe oryzae
Y34]
gi|440481100|gb|ELQ61720.1| hypothetical protein OOW_P131scaffold01159g26 [Magnaporthe oryzae
P131]
Length = 328
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GP+ S +L YDRSGRS G A + YE DA A+K ++G G+P+++ +
Sbjct: 118 LFSRIGPIISLELLYDRSGRSEGVAYVTYESHKDATLAVKDFDGANAAGQPIRLSI 173
>gi|357503119|ref|XP_003621848.1| THO complex subunit [Medicago truncatula]
gi|355496863|gb|AES78066.1| THO complex subunit [Medicago truncatula]
Length = 106
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADV 64
LFS+ L+ +HYD+ G S GTA++ + R SDA+ A+++ N + L G+ +QI+L
Sbjct: 29 LFSKNDELEGYSIHYDQFGESKGTAEVFFTRESDALAALRRCNQMKLYGKTLQIELVGTT 88
Query: 65 SV 66
V
Sbjct: 89 LV 90
>gi|281206834|gb|EFA81018.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 343
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 10 GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
G +K ++ YDRS RS+GTA +IY + SDAI A+K +NG +D ++++
Sbjct: 290 GDVKEVRIQYDRSSRSMGTAYVIYYQESDAIDAIKHFNGAMIDKNRIKVE 339
>gi|242793052|ref|XP_002482084.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218718672|gb|EED18092.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 330
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 41/56 (73%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS+ GP++ ++++DR+GRS GTA + Y+ DA +A+++++G G+P+++ L
Sbjct: 101 LFSKIGPVQRVRINFDRAGRSEGTATVTYQYVEDARQAIREFDGANARGQPIRLTL 156
>gi|389626725|ref|XP_003711016.1| hypothetical protein MGG_04399 [Magnaporthe oryzae 70-15]
gi|351650545|gb|EHA58404.1| hypothetical protein MGG_04399 [Magnaporthe oryzae 70-15]
Length = 332
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LFS GP+ S +L YDRSGRS G A + YE DA A+K ++G G+P+++ +
Sbjct: 122 LFSRIGPIISLELLYDRSGRSEGVAYVTYESHKDATLAVKDFDGANAAGQPIRLSI 177
>gi|145356552|ref|XP_001422492.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582735|gb|ABP00809.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 201
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
ELF + G + +A ++Y +G+S GTA++ A+KA+K YNGV LDGRP+ I
Sbjct: 50 ELFGQVGRVLNAGINYGPNGKSKGTAEVTLATLESALKAVKTYNGVKLDGRPLNI 104
>gi|392575072|gb|EIW68206.1| hypothetical protein TREMEDRAFT_57251 [Tremella mesenterica DSM
1558]
Length = 201
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQLAAD 63
+ S GP+KS +LHY +G+S G A +++ + D KA Y+ +D RPM+++LA D
Sbjct: 81 MQSTVGPVKSVQLHYTSAGKSTGVATVLFRNKGDGNKAHAAYHNRMVDNQRPMKVELAFD 140
Query: 64 VSVLENTVPR 73
S L++ R
Sbjct: 141 PSQLQSLASR 150
>gi|449016405|dbj|BAM79807.1| unknown transcriptional coactivator [Cyanidioschyzon merolae strain
10D]
Length = 275
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I +LF+ GP +A + +DR G+S G A + Y A +A+KQ++ + LDG+P+ +Q+
Sbjct: 55 IADLFNSVGPTITAFIRHDREGKSKGVATVKYADMETAERAVKQFHSLTLDGQPLVVQI 113
>gi|428184064|gb|EKX52920.1| hypothetical protein GUITHDRAFT_161108 [Guillardia theta CCMP2712]
Length = 248
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 2 IYELFSEFG-PLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ EL E G P+KSA++ Y + G S G ++++ +R+ A K +K GVPLDG P+++ L
Sbjct: 100 LEELCEEHGGPVKSAEIFYKKDGASTGQGEVVFRQRAHAEKVLKGLQGVPLDGLPLKLAL 159
>gi|121713216|ref|XP_001274219.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119402372|gb|EAW12793.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 332
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y R SDA A+ +++G G+P+++ L
Sbjct: 104 LEDLFTRIGPITNLSLVYDRAGRSEGVAYVTYNRVSDARTAISEFDGANAKGQPIRLALV 163
Query: 62 A 62
A
Sbjct: 164 A 164
>gi|400602903|gb|EJP70501.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 301
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF G + +L +DR+GRS G A + YE + DA +A+KQ++G +G+P+++ L
Sbjct: 99 IGELFRRIGRVVRLQLKFDRAGRSEGIAYVTYEHKEDANEAIKQFDGANANGQPIRLTL 157
>gi|357487165|ref|XP_003613870.1| THO complex subunit 4-A [Medicago truncatula]
gi|355515205|gb|AES96828.1| THO complex subunit 4-A [Medicago truncatula]
Length = 82
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 29/35 (82%)
Query: 27 GTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
G+A+++Y RRSDA A+K+YN V LDG+PM+I++
Sbjct: 18 GSAEVVYNRRSDAFTALKRYNNVLLDGKPMKIEIV 52
>gi|46124955|ref|XP_387031.1| hypothetical protein FG06855.1 [Gibberella zeae PH-1]
Length = 323
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP+ +L YDR+GRS GTA + YER DA A+ +++ +G+P+ + L
Sbjct: 103 LSELFQRIGPISRLQLRYDRAGRSEGTAYVTYERNEDAKAAILEFDRANANGQPIYLTL 161
>gi|408388313|gb|EKJ67999.1| hypothetical protein FPSE_11810 [Fusarium pseudograminearum CS3096]
Length = 357
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF GP+ +L YDR+GRS GTA + YER DA A+ +++ +G+P+ + L
Sbjct: 131 LSELFQRIGPISRLQLRYDRAGRSEGTAYVTYERNEDAKAAVLEFDRANANGQPIYLTL 189
>gi|327352914|gb|EGE81771.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 313
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + +
Sbjct: 119 LEDLFTRIGPINALSLRYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPITLTMM 178
Query: 62 ADVS 65
+ S
Sbjct: 179 SSTS 182
>gi|242818497|ref|XP_002487129.1| RNA annealing protein Yra1, putative [Talaromyces stipitatus ATCC
10500]
gi|218713594|gb|EED13018.1| RNA annealing protein Yra1, putative [Talaromyces stipitatus ATCC
10500]
Length = 246
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADV 64
GP+K + Y+++G S G A +++ + A KA K+ NG +DGRPM++++ D
Sbjct: 91 FVKTVGPVKRVTVTYNQNGVSRGIASIVFSKPDTAAKAAKELNGTLVDGRPMKVEVVVDA 150
Query: 65 S 65
+
Sbjct: 151 T 151
>gi|395830899|ref|XP_003788550.1| PREDICTED: transformer-2 protein homolog alpha isoform 1
[Otolemur garnettii]
gi|194385084|dbj|BAG60948.1| unnamed protein product [Homo sapiens]
Length = 180
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 36 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 94
>gi|395830901|ref|XP_003788551.1| PREDICTED: transformer-2 protein homolog alpha isoform 2
[Otolemur garnettii]
gi|395830903|ref|XP_003788552.1| PREDICTED: transformer-2 protein homolog alpha isoform 3
[Otolemur garnettii]
gi|90083128|dbj|BAE90646.1| unnamed protein product [Macaca fascicularis]
gi|194373917|dbj|BAG62271.1| unnamed protein product [Homo sapiens]
gi|194374591|dbj|BAG62410.1| unnamed protein product [Homo sapiens]
Length = 181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 36 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 94
>gi|444710515|gb|ELW51495.1| THO complex subunit 4 [Tupaia chinensis]
Length = 100
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 38 DAIKAMKQYNGVPLDGRPMQIQLAADVSVLENTVPRPVARGGRGGAS 84
DA+KAMKQYNG PLDGRPM IQL +++ +T R V RGG +
Sbjct: 21 DALKAMKQYNGFPLDGRPMNIQL---ITLQIDTQRRSVQSVNRGGMT 64
>gi|281353862|gb|EFB29446.1| hypothetical protein PANDA_010269 [Ailuropoda melanoleuca]
Length = 157
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 81 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 139
>gi|429849976|gb|ELA25298.1| RNA binding domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 430
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF+ GP+ L YDR+GRS G A + R DA +A+K+++G +G+P+++
Sbjct: 117 LEELFNRIGPVVKLDLKYDRAGRSEGIAFVTMSTREDAQEAIKEFDGANANGQPIKLSF 175
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 6 FSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
F + GP+K+A++ DR SGRS G + +E A+KAM Q+ G +DGRP+++ L+
Sbjct: 225 FEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQFAGKEIDGRPVRVDLS 281
>gi|261201622|ref|XP_002628025.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590122|gb|EEQ72703.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 350
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + +
Sbjct: 119 LEDLFTRIGPINALSLRYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPITLTMM 178
Query: 62 ADVS 65
+ S
Sbjct: 179 SSTS 182
>gi|380793113|gb|AFE68432.1| transformer-2 protein homolog alpha, partial [Macaca mulatta]
Length = 222
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|187282153|ref|NP_001119768.1| transformer-2 protein homolog alpha [Rattus norvegicus]
gi|149033412|gb|EDL88213.1| similar to RIKEN cDNA G430041M01 (predicted) [Rattus norvegicus]
Length = 235
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 135 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|70998152|ref|XP_753805.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|66851441|gb|EAL91767.1| RNA binding protein, putative [Aspergillus fumigatus Af293]
gi|159126460|gb|EDP51576.1| RNA binding protein, putative [Aspergillus fumigatus A1163]
Length = 334
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAA 62
+LF+ GP+ + L YDR+GRS G A + Y R +DA A+ +++G G+P+++ L A
Sbjct: 108 DLFNRIGPVSNLSLVYDRAGRSEGVAYVTYNRANDARTAIAEFDGANAKGQPIRLTLVA 166
>gi|327274869|ref|XP_003222198.1| PREDICTED: transformer-2 protein homolog alpha-like [Anolis
carolinensis]
Length = 279
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM+ NG+ LDGR +++ +
Sbjct: 135 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMEHANGMELDGRRIRVDYS 193
>gi|239611834|gb|EEQ88821.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 350
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + +
Sbjct: 119 LEDLFTRIGPINALSLRYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPITLTMM 178
Query: 62 ADVS 65
+ S
Sbjct: 179 SSTS 182
>gi|114052084|ref|NP_001039845.1| transformer-2 protein homolog alpha [Bos taurus]
gi|345780251|ref|XP_539475.3| PREDICTED: transformer-2 protein homolog alpha isoform 1 [Canis
lupus familiaris]
gi|410952462|ref|XP_003982899.1| PREDICTED: transformer-2 protein homolog alpha [Felis catus]
gi|86821769|gb|AAI05490.1| Transformer 2 alpha homolog (Drosophila) [Bos taurus]
gi|296488601|tpg|DAA30714.1| TPA: transformer-2 alpha [Bos taurus]
Length = 281
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|74152700|dbj|BAE42623.1| unnamed protein product [Mus musculus]
Length = 212
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 135 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|51701959|sp|Q6PFR5.1|TRA2A_MOUSE RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2
alpha; Short=TRA2-alpha; AltName: Full=Transformer-2
protein homolog A
gi|34785414|gb|AAH57448.1| Transformer 2 alpha homolog (Drosophila) [Mus musculus]
Length = 281
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 135 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|384946690|gb|AFI36950.1| transformer-2 protein homolog alpha [Macaca mulatta]
Length = 280
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|355560756|gb|EHH17442.1| Transformer-2 protein-like protein alpha, partial [Macaca mulatta]
gi|355747772|gb|EHH52269.1| Transformer-2 protein-like protein alpha, partial [Macaca
fascicularis]
Length = 279
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|301771922|ref|XP_002921381.1| PREDICTED: hypothetical protein LOC100480496 [Ailuropoda
melanoleuca]
Length = 281
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|116175271|ref|NP_001070691.1| transformer-2 protein homolog alpha [Sus scrofa]
gi|115371739|gb|ABI96194.1| TRA2A [Sus scrofa]
Length = 279
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|111160869|ref|NP_932770.2| transformer-2 protein homolog alpha [Mus musculus]
gi|171846642|gb|AAI61978.1| Tra2a protein [Rattus norvegicus]
Length = 282
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 135 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|9558733|ref|NP_037425.1| transformer-2 protein homolog alpha [Homo sapiens]
gi|281182542|ref|NP_001162359.1| transformer-2 protein homolog alpha [Papio anubis]
gi|384475793|ref|NP_001245042.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|114612370|ref|XP_001158245.1| PREDICTED: transformer-2 protein homolog alpha-like isoform 3 [Pan
troglodytes]
gi|297680857|ref|XP_002818189.1| PREDICTED: transformer-2 protein homolog alpha-like [Pongo abelii]
gi|332242557|ref|XP_003270451.1| PREDICTED: transformer-2 protein homolog alpha [Nomascus
leucogenys]
gi|403287930|ref|XP_003935172.1| PREDICTED: transformer-2 protein homolog alpha [Saimiri boliviensis
boliviensis]
gi|426355642|ref|XP_004045221.1| PREDICTED: transformer-2 protein homolog alpha-like [Gorilla
gorilla gorilla]
gi|4033480|sp|Q13595.1|TRA2A_HUMAN RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2
alpha; Short=TRA2-alpha; AltName: Full=Transformer-2
protein homolog A
gi|1256837|gb|AAC50658.1| transformer-2 alpha [Homo sapiens]
gi|16877711|gb|AAH17094.1| Transformer 2 alpha homolog (Drosophila) [Homo sapiens]
gi|31455551|dbj|BAC77401.1| putative MAPK activating protein [Homo sapiens]
gi|37674420|gb|AAQ96870.1| unknown [Homo sapiens]
gi|119614194|gb|EAW93788.1| transformer-2 alpha, isoform CRA_a [Homo sapiens]
gi|123983254|gb|ABM83368.1| transformer-2 alpha [synthetic construct]
gi|123997955|gb|ABM86579.1| transformer-2 alpha [synthetic construct]
gi|160904205|gb|ABX52190.1| transformer-2 alpha (predicted) [Papio anubis]
gi|189054556|dbj|BAG37329.1| unnamed protein product [Homo sapiens]
gi|261860348|dbj|BAI46696.1| transformer 2 alpha homolog [synthetic construct]
gi|351705767|gb|EHB08686.1| Transformer-2 protein-like protein alpha [Heterocephalus glaber]
gi|383417837|gb|AFH32132.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|384946688|gb|AFI36949.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|410214134|gb|JAA04286.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410214136|gb|JAA04287.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410249156|gb|JAA12545.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410249158|gb|JAA12546.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410300572|gb|JAA28886.1| transformer 2 alpha homolog [Pan troglodytes]
Length = 282
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|397472988|ref|XP_003808009.1| PREDICTED: transformer-2 protein homolog alpha [Pan paniscus]
Length = 297
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|195972819|ref|NP_001124409.1| transformer-2 protein homolog alpha [Ovis aries]
gi|193245518|gb|ACF16977.1| TRA2A [Ovis aries]
Length = 281
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|449492584|ref|XP_002192791.2| PREDICTED: transformer-2 protein homolog alpha [Taeniopygia
guttata]
Length = 275
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM+ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLTGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMEHANGMELDGRRIRVDYS 195
>gi|417408391|gb|JAA50749.1| Putative translation initiation factor 3 subunit g eif-3g, partial
[Desmodus rotundus]
Length = 180
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 103 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 161
>gi|344270299|ref|XP_003406983.1| PREDICTED: transformer-2 protein homolog alpha-like [Loxodonta
africana]
Length = 282
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|148666184|gb|EDK98600.1| RIKEN cDNA G430041M01, isoform CRA_a [Mus musculus]
Length = 281
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 135 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|57530708|ref|NP_001006360.1| transformer-2 protein homolog alpha [Gallus gallus]
gi|53127932|emb|CAG31257.1| hypothetical protein RCJMB04_4g4 [Gallus gallus]
Length = 277
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS +GPL + YD R+GRS G A + +ER D+ +AM+ NG+ LDGR +++
Sbjct: 137 LCEVFSRYGPLTGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMEHANGMELDGRRIRVDY 196
Query: 61 A 61
+
Sbjct: 197 S 197
>gi|449270976|gb|EMC81612.1| Transformer-2 like protein alpha, partial [Columba livia]
Length = 264
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM+ NG+ LDGR +++ +
Sbjct: 127 EVFSRYGPLTGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMEHANGMELDGRRIRVDYS 185
>gi|440901501|gb|ELR52432.1| Transformer-2 protein-like protein alpha, partial [Bos grunniens
mutus]
Length = 281
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|148666185|gb|EDK98601.1| RIKEN cDNA G430041M01, isoform CRA_b [Mus musculus]
Length = 270
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 123 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 181
>gi|417409216|gb|JAA51125.1| Putative translation initiation factor 3 subunit g eif-3g, partial
[Desmodus rotundus]
Length = 269
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 125 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 183
>gi|330906141|ref|XP_003295370.1| hypothetical protein PTT_00586 [Pyrenophora teres f. teres 0-1]
gi|311333412|gb|EFQ96540.1| hypothetical protein PTT_00586 [Pyrenophora teres f. teres 0-1]
Length = 167
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 13 KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVSVLENT 70
K L YD +GRS+G+A +I+ R A KA +GV +DGRP+++++ S + T
Sbjct: 99 KKVLLQYDAAGRSVGSATVIFNRHDQATKATAALDGVKIDGRPVRVEILVSASAIPAT 156
>gi|148666187|gb|EDK98603.1| RIKEN cDNA G430041M01, isoform CRA_d [Mus musculus]
Length = 302
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 155 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 213
>gi|148666186|gb|EDK98602.1| RIKEN cDNA G430041M01, isoform CRA_c [Mus musculus]
Length = 300
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 155 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 213
>gi|449295901|gb|EMC91922.1| hypothetical protein BAUCODRAFT_152279 [Baudoinia compniacensis
UAMH 10762]
Length = 255
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 1 MIYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
++ + F++ G +K L Y +GRS G A +I+ + + A +AMKQ+N V +D RPM+I+
Sbjct: 83 LLKDFFAKAVGSVKKVLLSYGPNGRSRGEATVIFSKPNAAAEAMKQFNNVKVDNRPMKIE 142
Query: 60 L 60
+
Sbjct: 143 I 143
>gi|345329358|ref|XP_001513669.2| PREDICTED: transformer-2 protein homolog alpha-like
[Ornithorhynchus anatinus]
Length = 284
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 139 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 197
>gi|52345542|ref|NP_001004819.1| transformer 2 alpha homolog [Xenopus (Silurana) tropicalis]
gi|49250512|gb|AAH74599.1| transformer-2 alpha [Xenopus (Silurana) tropicalis]
gi|89266999|emb|CAJ81300.1| transformer-2 alpha (tra2a) [Xenopus (Silurana) tropicalis]
Length = 287
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM+ NG+ LDGR +++ +
Sbjct: 132 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGMELDGRRIRVDYS 190
>gi|395540434|ref|XP_003772160.1| PREDICTED: transformer-2 protein homolog alpha [Sarcophilus
harrisii]
Length = 272
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 127 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 185
>gi|355725835|gb|AES08679.1| transformer 2 alpha-like protein [Mustela putorius furo]
Length = 267
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 124 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 182
>gi|119479649|ref|XP_001259853.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119408007|gb|EAW17956.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 353
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y R +DA A+ +++G G+P+++ L
Sbjct: 125 LEDLFTRIGPVSNLSLVYDRAGRSEGVAYVTYNRANDARTAIAEFDGANAKGQPIRLTLV 184
Query: 62 A 62
A
Sbjct: 185 A 185
>gi|354490714|ref|XP_003507501.1| PREDICTED: transformer-2 protein homolog alpha-like [Cricetulus
griseus]
Length = 283
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 136 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 194
>gi|348522786|ref|XP_003448905.1| PREDICTED: transformer-2 protein homolog alpha-like [Oreochromis
niloticus]
Length = 279
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERLEDSKEAMERANGMELDGRRIRVDYS 195
>gi|326921889|ref|XP_003207186.1| PREDICTED: transformer-2 protein homolog alpha-like [Meleagris
gallopavo]
Length = 277
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM+ NG+ LDGR +++ +
Sbjct: 139 EVFSRYGPLTGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMEHANGMELDGRRIRVDYS 197
>gi|212535436|ref|XP_002147874.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210070273|gb|EEA24363.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 329
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 39/56 (69%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF GP++ ++++DR+GRS GTA + Y+ DA +A+++++G G+P+++ L
Sbjct: 98 LFGNIGPVQRVRINFDRAGRSEGTATVTYQYLEDAKQAIREFDGANAKGQPIRLTL 153
>gi|406859155|gb|EKD12224.1| protein mlo3-like protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 263
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 1 MIYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
MI E F++ G +K L Y G S G AD+ + R A +A++ N +P+DG+P+++
Sbjct: 86 MIKEYFAKTVGAVKRVDLSYGPRGESRGVADITFVRSDSATRAVESCNNIPVDGKPIKVS 145
Query: 60 LAADVSVLENTVPRP 74
L D + + ++P P
Sbjct: 146 LILDANRAK-SIPAP 159
>gi|291394539|ref|XP_002713870.1| PREDICTED: transformer-2 alpha [Oryctolagus cuniculus]
Length = 330
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++ +
Sbjct: 185 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 243
>gi|212530514|ref|XP_002145414.1| RNA annealing protein Yra1, putative [Talaromyces marneffei ATCC
18224]
gi|210074812|gb|EEA28899.1| RNA annealing protein Yra1, putative [Talaromyces marneffei ATCC
18224]
Length = 249
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 9 FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
GP+K + Y+++G S G A +++ + A KA K+ NG +DGRPM++++ D +
Sbjct: 95 VGPVKRVTVTYNQNGVSRGIASIVFNKPDTAAKAAKELNGTLVDGRPMKVEVVVDAT 151
>gi|358055279|dbj|GAA98735.1| hypothetical protein E5Q_05423 [Mixia osmundae IAM 14324]
Length = 243
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MIYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQI 58
I ELFS GP KS L YD G+S G A + + +R DA A + YN +DG R M++
Sbjct: 94 QIRELFSSTVGPCKSVSLSYDSKGKSKGVATIEFTKRGDATVAYQSYNKRLVDGKRQMKV 153
Query: 59 QLAAD 63
++ D
Sbjct: 154 EIVVD 158
>gi|395541317|ref|XP_003772591.1| PREDICTED: polymerase delta-interacting protein 3 [Sarcophilus
harrisii]
Length = 418
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 294 IVELFCVCGALKRARLVHP------GVAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 347
Query: 62 ADVSVLENTVP 72
+ SV+ + P
Sbjct: 348 VNGSVITSDQP 358
>gi|58269762|ref|XP_572037.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134113845|ref|XP_774507.1| hypothetical protein CNBG1520 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257145|gb|EAL19860.1| hypothetical protein CNBG1520 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228273|gb|AAW44730.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 200
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQLAAD 63
+ S GP+KS ++ Y +G+S G A +++ + DA KA Y+ +D RPM+++LA D
Sbjct: 86 MQSTVGPVKSVQMSYTATGKSTGIATVVFRNKGDARKAHASYHNRMIDNQRPMKVELAID 145
Query: 64 -----VSVLENTVPRPVARGGRGGASGGYRN 89
S++ P PV R + RN
Sbjct: 146 PNQAQSSLVNRVAPAPVQPQKRRAPASKPRN 176
>gi|341895293|gb|EGT51228.1| hypothetical protein CAEBREN_04493 [Caenorhabditis brenneri]
Length = 218
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 10/75 (13%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF E+ P + +LH+D SG SLGTADL+ + A + K GV LDG+ QI+L
Sbjct: 117 LEELFEEYQP-EVVQLHFDSSGVSLGTADLVVPQPQVA-RIQKALEGVLLDGQ--QIEL- 171
Query: 62 ADVSVLENTVPRPVA 76
LE TV +PV+
Sbjct: 172 -----LETTVAKPVS 181
>gi|47217029|emb|CAG01657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 466
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L +G A++++ R+ DA+ A ++YN LDG+PM+ L
Sbjct: 329 IVELFCVCGALKRARLVR------VGVAEVVFVRKEDAVSAYRKYNNRCLDGQPMKCNLH 382
Query: 62 ADVSVLENTVPRPVARGGRGGASGGY-RNGTAPTYRP 97
SV+ + P + G S G ++G + RP
Sbjct: 383 IQGSVITSDQPILLRLSDTPGTSNGTKKDGLPSSSRP 419
>gi|401419084|ref|XP_003874032.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490266|emb|CBZ25526.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 347
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS FG + S+ + D SG+SLGTA + YE +A++AM+ +G+PL G+ + +Q A
Sbjct: 36 EIFSAFGNITSSMVMRDIYSGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQWA 94
>gi|189189852|ref|XP_001931265.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972871|gb|EDU40370.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 253
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVSVLENT 70
L YD +GRS+G+A +I+ R A KA +GV +DGRP+++++ S + T
Sbjct: 103 LQYDAAGRSVGSATVIFNRHDQATKATAALDGVKIDGRPVRVEILVSASAIPAT 156
>gi|334349137|ref|XP_001369711.2| PREDICTED: transformer-2 protein homolog alpha-like [Monodelphis
domestica]
Length = 418
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++
Sbjct: 176 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 235
Query: 61 A 61
+
Sbjct: 236 S 236
>gi|196000464|ref|XP_002110100.1| hypothetical protein TRIADDRAFT_53717 [Trichoplax adhaerens]
gi|190588224|gb|EDV28266.1| hypothetical protein TRIADDRAFT_53717 [Trichoplax adhaerens]
Length = 318
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G L+SA+L+ + G A+++Y SDAIKA+ Y+ LDG PM +L
Sbjct: 255 IKELFGAIGRLRSARLNTN------GIAEVVYVNESDAIKAVSSYHNRSLDGYPMHCKLV 308
Query: 62 AD 63
D
Sbjct: 309 TD 310
>gi|348564374|ref|XP_003467980.1| PREDICTED: transformer-2 protein homolog alpha-like [Cavia
porcellus]
Length = 393
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS +GPL + YD R+GRS G A + +ER D+ +AM++ NG+ LDGR +++
Sbjct: 140 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 199
Query: 61 A 61
+
Sbjct: 200 S 200
>gi|393212766|gb|EJC98265.1| hypothetical protein FOMMEDRAFT_162024 [Fomitiporia mediterranea
MF3/22]
Length = 141
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
I ELF+ GPLK +LH++ G+ GTA +++ R+ D KA +QYN +DG
Sbjct: 88 IKELFTTTVGPLKDVQLHFNPQGKWNGTATVLFSRKGDGTKAYEQYNNRLIDG 140
>gi|398013679|ref|XP_003860031.1| hypothetical protein, unknown function, partial [Leishmania
donovani]
gi|322498250|emb|CBZ33324.1| hypothetical protein, unknown function, partial [Leishmania
donovani]
Length = 280
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS FG + S+ + D SG+SLGTA + YE +A++AM+ +G+PL G+ + +Q A
Sbjct: 44 EIFSAFGKITSSMVMRDIYSGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQWA 102
>gi|389747821|gb|EIM88999.1| hypothetical protein STEHIDRAFT_119773 [Stereum hirsutum FP-91666
SS1]
Length = 136
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 1 MIYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
+ +LF S GPL+ LHYD +GRS G A + +++R D KA + YN +DG
Sbjct: 82 QVKDLFHSTVGPLRDVTLHYDAAGRSKGVASVHFQKRGDGTKAYQTYNNRLIDG 135
>gi|350632863|gb|EHA21230.1| hypothetical protein ASPNIDRAFT_125514 [Aspergillus niger ATCC
1015]
Length = 259
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+I +LF+ GP+ + L YDR+GRS G A + Y DA A+++++G G+P+++ L
Sbjct: 27 LIPDLFTRIGPISNVSLVYDRAGRSEGVAFVTYTHIGDARTAIREFDGANAKGQPIRLTL 86
Query: 61 AA 62
+
Sbjct: 87 IS 88
>gi|154285798|ref|XP_001543694.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407335|gb|EDN02876.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 395
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + +
Sbjct: 169 LEDLFTRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQPITLTMI 228
Query: 62 A 62
+
Sbjct: 229 S 229
>gi|405970774|gb|EKC35650.1| Polymerase delta-interacting protein 3 [Crassostrea gigas]
Length = 369
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF GP+K A+L + G A+++Y + D KA+++YN LDG PMQ++L
Sbjct: 253 IIELFGAIGPIKRARLLKE------GVAEVVYLNKEDVQKAIQKYNNRELDGLPMQVKL 305
>gi|170100094|ref|XP_001881265.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643944|gb|EDR08195.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +F + G L + + YDRSGRS GTA + +E ++A +A KQ++G+ G+PM+I
Sbjct: 72 LTAIFGQIGTLVREPLIRYDRSGRSSGTAFIAFETNAEATRAKKQFDGILAKGQPMEIVF 131
Query: 61 AA 62
A
Sbjct: 132 DA 133
>gi|225558206|gb|EEH06490.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 395
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + +
Sbjct: 169 LEDLFTRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQPITLTM 227
>gi|449679895|ref|XP_002164621.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Hydra magnipapillata]
Length = 430
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ E FS+ G LK +L +RSG+S G A + YE +DA A+ + + VPL+ RP+ + L+
Sbjct: 289 VTEHFSKIGKLKQVRLVTNRSGKSKGYAYVEYESEADAQSAIVKLDQVPLNDRPINVSLS 348
>gi|358374690|dbj|GAA91280.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 337
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y SDA A+++++G G+P+++ L
Sbjct: 105 LEDLFTRIGPISNVSLVYDRAGRSEGVAFVTYSHISDARTAIREFDGANAKGQPIRLTLI 164
Query: 62 A 62
+
Sbjct: 165 S 165
>gi|325093985|gb|EGC47295.1| alpha-actinin [Ajellomyces capsulatus H88]
Length = 1058
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + +
Sbjct: 160 LEDLFTRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQPITLTMI 219
Query: 62 A 62
+
Sbjct: 220 S 220
>gi|403412507|emb|CCL99207.1| predicted protein [Fibroporia radiculosa]
Length = 233
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 5 LFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQLAA 62
LF++ GP+K A + Y+ G+S G A + ++R SDA+ A +YNG +DG RP++I++
Sbjct: 71 LFAKTVGPVKDAFIVYNSQGKSKGMAIVSFQRASDAVVARAKYNGKIVDGRRPIKIEIIH 130
Query: 63 DVSVLENTVPRPVARGGRGG 82
D P+P++ R G
Sbjct: 131 DDEEASQAPPKPLSLLDRIG 150
>gi|346979325|gb|EGY22777.1| RNA binding domain-containing protein [Verticillium dahliae
VdLs.17]
Length = 329
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF+ GP+ L YDR+GRS G A + YE DA +A+++++G +G+P+++ +
Sbjct: 123 LFNRIGPVVRLNLRYDRAGRSEGVAYVTYEHPDDARQAIREFDGANANGQPIRLSI 178
>gi|330793081|ref|XP_003284614.1| hypothetical protein DICPUDRAFT_75578 [Dictyostelium purpureum]
gi|325085413|gb|EGC38820.1| hypothetical protein DICPUDRAFT_75578 [Dictyostelium purpureum]
Length = 294
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADV 64
+F + G +K+ K++YDRSGRS G+ +++ + DA A ++YNG LDG + I +
Sbjct: 227 VFEKIGEIKTIKINYDRSGRSEGSGYVVFSKDVDAKHAYERYNGAQLDG--LHIVITKGH 284
Query: 65 SVLEN 69
S+ E+
Sbjct: 285 SLQED 289
>gi|240277162|gb|EER40671.1| alpha-actinin [Ajellomyces capsulatus H143]
Length = 1058
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + +
Sbjct: 160 LEDLFTRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQPITLTMI 219
Query: 62 A 62
+
Sbjct: 220 S 220
>gi|198424161|ref|XP_002119758.1| PREDICTED: similar to DNA polymerase delta interacting protein 3
[Ciona intestinalis]
Length = 428
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELFS GP++ A++ G A++++ RR DAI A ++YN LDG+PMQ++L
Sbjct: 315 ILELFSVLGPVRRARM------VGPGKAEIVFIRRDDAILAYQKYNNRDLDGQPMQMKL 367
>gi|119593670|gb|EAW73264.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_a [Homo sapiens]
Length = 453
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 328 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 381
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 382 MNGNVITSDQP 392
>gi|157889123|dbj|BAF81027.1| transformer-2 [Glandirana rugosa]
Length = 272
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +GPL + YD R+GRS G A + +ER D+ AM+ NG+ LDGR +++ +
Sbjct: 137 EVFSRYGPLGGVNVVYDQRTGRSRGFAFVYFERIEDSRAAMEHANGMELDGRRIRVDYS 195
>gi|148236671|ref|NP_001080216.1| transformer 2 alpha homolog [Xenopus laevis]
gi|27924195|gb|AAH44990.1| Tra2a-prov protein [Xenopus laevis]
Length = 276
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E+FS +GPL + YD R+GRS G A + +ER D+ +AM+ +G+ LDGR +++
Sbjct: 128 IREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHADGMELDGRRIRVDY 187
Query: 61 A 61
+
Sbjct: 188 S 188
>gi|169607731|ref|XP_001797285.1| hypothetical protein SNOG_06924 [Phaeosphaeria nodorum SN15]
gi|111064455|gb|EAT85575.1| hypothetical protein SNOG_06924 [Phaeosphaeria nodorum SN15]
Length = 198
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 13 KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
K L Y +GRSLG+A +I+ + A+KA NGV +DGRP+++++
Sbjct: 35 KKVLLQYGPTGRSLGSATIIFNKHEQAVKATSALNGVKIDGRPIRVEM 82
>gi|126339059|ref|XP_001370917.1| PREDICTED: polymerase delta-interacting protein 3-like [Monodelphis
domestica]
Length = 411
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 287 IVELFCVCGALKRARLVHP------GVAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 340
Query: 62 ADVSVLENTVP 72
+ S++ + P
Sbjct: 341 MNGSIITSDQP 351
>gi|119593672|gb|EAW73266.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_c [Homo sapiens]
Length = 482
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 357 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 410
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 411 MNGNVITSDQP 421
>gi|258570675|ref|XP_002544141.1| hypothetical protein UREG_03658 [Uncinocarpus reesii 1704]
gi|237904411|gb|EEP78812.1| hypothetical protein UREG_03658 [Uncinocarpus reesii 1704]
Length = 1075
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ S + YDR+GRS G A + Y+R DA A+++++G G+P+++ L
Sbjct: 871 LEDLFTRIGPILSRSILYDRAGRSEGIAFVTYKRLVDAQTAIREFDGANAKGQPIRLTLV 930
>gi|355563731|gb|EHH20293.1| hypothetical protein EGK_03115 [Macaca mulatta]
Length = 391
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 266 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 319
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 320 MNGNVITSDQP 330
>gi|345561390|gb|EGX44479.1| hypothetical protein AOL_s00188g147 [Arthrobotrys oligospora ATCC
24927]
Length = 464
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ++FS G ++ + YD++GRS G A++IY +AI A+ Q++G G+P++++LA
Sbjct: 200 LRDVFSRVGEIRRIDIIYDKAGRSEGIANVIYATADEAILAVDQFDGANAKGQPIRVRLA 259
Query: 62 A 62
+
Sbjct: 260 S 260
>gi|295657714|ref|XP_002789423.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283845|gb|EEH39411.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 333
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + L
Sbjct: 103 LEDLFTRIGPISALSLLYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPITLTLM 162
Query: 62 A 62
+
Sbjct: 163 S 163
>gi|147902093|ref|NP_001089369.1| uncharacterized protein LOC734419 [Xenopus laevis]
gi|62471556|gb|AAH93543.1| MGC114944 protein [Xenopus laevis]
Length = 395
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L S G A++++ R+ DA+ A K+YN LDG+PM+ L
Sbjct: 304 IVELFCVCGALKRARLL------SPGVAEVVFVRKDDAVGAYKKYNNRYLDGQPMKCNLH 357
Query: 62 ADVSVLENTVP 72
+ SV+ + P
Sbjct: 358 LNGSVITSDQP 368
>gi|398013681|ref|XP_003860032.1| hypothetical protein, unknown function, partial [Leishmania
donovani]
gi|322498251|emb|CBZ33325.1| hypothetical protein, unknown function, partial [Leishmania
donovani]
Length = 123
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS FG + S+ + D SG+SLGTA + YE +A++AM+ +G+PL G+ + +Q A
Sbjct: 37 EIFSAFGKITSSMVMRDIYSGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQWA 95
>gi|345311215|ref|XP_001508801.2| PREDICTED: polymerase delta-interacting protein 3-like, partial
[Ornithorhynchus anatinus]
Length = 394
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 270 IVELFCVCGALKRARLVHP------GVAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 323
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 324 INGNVITSDQP 334
>gi|312073325|ref|XP_003139470.1| RNA and export factor binding protein 2 [Loa loa]
gi|307765372|gb|EFO24606.1| RNA and export factor binding protein 2 [Loa loa]
Length = 215
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF+E P + + Y+ G GTA +I++R D +K +Q+ GV LDG+ M
Sbjct: 82 LQELFAEH-PYEDVAVQYEPDGNPSGTAVVIFKRFEDGMKLKRQFTGVRLDGKVM----- 135
Query: 62 ADVSVL-ENTVPRPVARG--GRGGASGGYRNGTAP--TYRPRGGL 101
D+ VL +N R VA+G + G GG R G+ T R RGG
Sbjct: 136 -DLFVLTKNDFMRGVAQGRITKRGTKGGIRFGSNNLLTKRRRGGF 179
>gi|451848303|gb|EMD61609.1| hypothetical protein COCSADRAFT_39306 [Cochliobolus sativus ND90Pr]
Length = 253
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVSVL 67
L YD +GRS+G+A +I+ + A KA +GV +DGRP+++++ SV+
Sbjct: 103 LQYDAAGRSVGSATIIFNKHEQAAKATAALDGVKIDGRPVRVEMLVSPSVI 153
>gi|320031865|gb|EFW13822.1| RNA binding protein [Coccidioides posadasii str. Silveira]
Length = 361
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF+ GP+ S L YDR+GRS G A + Y+R DA A+++++G G+P+++ L
Sbjct: 155 LFTGIGPILSLSLVYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPIRVTL 210
>gi|449297855|gb|EMC93872.1| hypothetical protein BAUCODRAFT_212912 [Baudoinia compniacensis
UAMH 10762]
Length = 329
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
LF GPL S KL YDR+ RS GTA + YE DA A+ Y+G +G+P++I
Sbjct: 110 LFERKGPLVSVKLLYDRADRSQGTAFVTYEDPRDARDAVADYDGQNANGQPIRI 163
>gi|226286952|gb|EEH42465.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 333
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y+R DA A+++++G G+P+ + L
Sbjct: 103 LEDLFTRIGPISALSLLYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPITLTLM 162
Query: 62 A 62
+
Sbjct: 163 S 163
>gi|440900830|gb|ELR51877.1| Polymerase delta-interacting protein 3, partial [Bos grunniens
mutus]
Length = 430
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 305 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 358
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 359 MNGNVITSDQP 369
>gi|357467585|ref|XP_003604077.1| UDP-D-apiose/UDP-D-xylose synthase [Medicago truncatula]
gi|355493125|gb|AES74328.1| UDP-D-apiose/UDP-D-xylose synthase [Medicago truncatula]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 27 GTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVSVLENTVPRPVARGGR 80
G+ +++Y RRSDA A+K+YN V LDG+PM+I++ S L T V+ R
Sbjct: 118 GSFEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIVGTNSELSVTARVNVSAMNR 171
>gi|146083786|ref|XP_001464835.1| hypothetical protein, unknown function [Leishmania infantum
JPCM5]
gi|134068930|emb|CAM67071.1| hypothetical protein, unknown function [Leishmania infantum
JPCM5]
Length = 348
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS FG + S+ + D SG+SLGTA + YE +A++AM+ +G+PL G+ + +Q A
Sbjct: 37 EIFSAFGKITSSMVMRDIYSGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQWA 95
>gi|119183879|ref|XP_001242919.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 1048
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF+ GP+ S L YDR+GRS G A + Y+R DA A+++++G G+P+++ L
Sbjct: 841 LFTGIGPILSLSLVYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPIRVTL 896
>gi|332231398|ref|XP_003264883.1| PREDICTED: uncharacterized protein LOC100580935 isoform 3 [Nomascus
leucogenys]
Length = 438
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 313 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 366
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 367 MNGNVITSDQP 377
>gi|346318895|gb|EGX88497.1| RNA annealing protein Yra1, putative [Cordyceps militaris CM01]
Length = 264
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 1 MIYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
I E F + GP+K +L Y + +S G A++I+ + A +A ++ NG+ +DGRP++I+
Sbjct: 78 QIKEYFVQSVGPIKRVELSYGPNSQSRGIANVIFHKPDGASRAFQKLNGLLVDGRPIKIE 137
Query: 60 LAADVSVLENTVPR 73
+ + + +PR
Sbjct: 138 IVVGAAQADKVIPR 151
>gi|332859961|ref|XP_003317329.1| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467012|ref|XP_003805228.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
Length = 438
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 313 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 366
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 367 MNGNVITSDQP 377
>gi|60359854|dbj|BAD90146.1| mKIAA1649 protein [Mus musculus]
Length = 453
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 329 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 382
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 383 MNGNVITSDQP 393
>gi|332859959|ref|XP_003317328.1| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467010|ref|XP_003805227.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
gi|410216670|gb|JAA05554.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410267536|gb|JAA21734.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410354105|gb|JAA43656.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
Length = 392
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|157867741|ref|XP_001682424.1| hypothetical protein LMJF_18_0180 [Leishmania major strain
Friedlin]
gi|68125878|emb|CAJ03474.1| hypothetical protein LMJF_18_0180 [Leishmania major strain
Friedlin]
Length = 348
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS FG + S+ + D +G+SLGTA + YE +A++AM+ +G+PL G+ + +Q
Sbjct: 35 LREIFSAFGKITSSMVMRDIYNGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQW 94
Query: 61 A 61
A
Sbjct: 95 A 95
>gi|30089919|ref|NP_835237.1| polymerase delta-interacting protein 3 isoform 2 [Homo sapiens]
gi|7228286|emb|CAB77059.1| hypothetical protein [Homo sapiens]
gi|56079007|gb|AAH56912.2| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|158256678|dbj|BAF84312.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|449276143|gb|EMC84806.1| Polymerase delta-interacting protein 3 [Columba livia]
Length = 404
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 280 IVELFCVCGALKRARLVHP------GVAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 333
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 334 MNGNVITSDQP 344
>gi|402884440|ref|XP_003905690.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Papio
anubis]
Length = 392
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|33876281|gb|AAH01488.2| POLDIP3 protein, partial [Homo sapiens]
Length = 417
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 292 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 345
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 346 MNGNVITSDQP 356
>gi|29837655|ref|NP_115687.2| polymerase delta-interacting protein 3 isoform 1 [Homo sapiens]
gi|50403796|sp|Q9BY77.2|PDIP3_HUMAN RecName: Full=Polymerase delta-interacting protein 3; AltName:
Full=46 kDa DNA polymerase delta interaction protein;
Short=p46; AltName: Full=S6K1 Aly/REF-like target;
Short=SKAR
gi|7228284|emb|CAB77058.1| hypothetical protein [Homo sapiens]
gi|37595436|gb|AAQ94604.1| RNA-binding protein P46 [Homo sapiens]
gi|47678443|emb|CAG30342.1| dJ222E13.3 [Homo sapiens]
gi|55777399|gb|AAH49840.1| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|63102441|gb|AAH95411.1| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|109451152|emb|CAK54437.1| POLDIP3 [synthetic construct]
gi|109451730|emb|CAK54736.1| POLDIP3 [synthetic construct]
gi|158256980|dbj|BAF84463.1| unnamed protein product [Homo sapiens]
gi|168278937|dbj|BAG11348.1| polymerase delta-interacting protein 3 [synthetic construct]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|61097949|ref|NP_001012832.1| polymerase delta-interacting protein 3 [Gallus gallus]
gi|60098375|emb|CAH65018.1| hypothetical protein RCJMB04_1d4 [Gallus gallus]
Length = 418
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 294 IVELFCVCGALKRARLVHP------GVAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 347
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 348 MNGNVITSDQP 358
>gi|426225859|ref|XP_004007077.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Ovis
aries]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|426225861|ref|XP_004007078.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Ovis
aries]
Length = 392
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|406864178|gb|EKD17224.1| RNA binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 292
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
F+ GP+ + L YDR+GRS G A + YE SDA KA+++++G G+P+++
Sbjct: 99 FNTIGPVINLTLTYDRAGRSEGVAYVTYETASDAKKAIREFDGANAKGQPIRL 151
>gi|34327982|dbj|BAB33368.2| KIAA1649 protein [Homo sapiens]
Length = 424
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 299 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 352
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 353 MNGNVITSDQP 363
>gi|383410751|gb|AFH28589.1| polymerase delta-interacting protein 3 isoform 2 [Macaca mulatta]
Length = 392
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|332859957|ref|XP_515172.3| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467008|ref|XP_003805226.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
gi|410216672|gb|JAA05555.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410267538|gb|JAA21735.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410354107|gb|JAA43657.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|326912076|ref|XP_003202380.1| PREDICTED: polymerase delta-interacting protein 3-like [Meleagris
gallopavo]
Length = 429
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 305 IVELFCVCGALKRARLVHP------GVAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 358
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 359 MNGNVITSDQP 369
>gi|301782633|ref|XP_002926728.1| PREDICTED: polymerase delta-interacting protein 3-like [Ailuropoda
melanoleuca]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|194382604|dbj|BAG64472.1| unnamed protein product [Homo sapiens]
Length = 438
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 313 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 366
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 367 MNGNVITSDQP 377
>gi|390458883|ref|XP_003732195.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Callithrix jacchus]
Length = 392
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|332231394|ref|XP_003264881.1| PREDICTED: uncharacterized protein LOC100580935 isoform 1 [Nomascus
leucogenys]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|157073881|ref|NP_001096653.1| polymerase delta-interacting protein 3 [Bos taurus]
gi|157279209|gb|AAI34442.1| Polymerase (DNA-directed), delta interacting protein 3 [Bos taurus]
gi|296486959|tpg|DAA29072.1| TPA: polymerase (DNA-directed), delta interacting protein 3 [Bos
taurus]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|390458881|ref|XP_002743862.2| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Callithrix jacchus]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|403282848|ref|XP_003932850.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Saimiri boliviensis boliviensis]
Length = 392
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|402884438|ref|XP_003905689.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Papio
anubis]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|348569626|ref|XP_003470599.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 2
[Cavia porcellus]
Length = 388
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 263 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 316
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 317 MNGNVITSDQP 327
>gi|332231396|ref|XP_003264882.1| PREDICTED: uncharacterized protein LOC100580935 isoform 2 [Nomascus
leucogenys]
Length = 392
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|443713100|gb|ELU06106.1| hypothetical protein CAPTEDRAFT_212702 [Capitella teleta]
Length = 458
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A++ + G A++IY R A+ A+K+Y+ LDGRPMQ+ +
Sbjct: 348 IVELFGSLGALKKARVIKN------GVAEVIYVERHCALAAVKKYHMRELDGRPMQVNMT 401
Query: 62 ADVSVLENTVPRPVARGGRGGAS 84
+ E V P R S
Sbjct: 402 TKATPKEQKVMVPPVRASTSHIS 424
>gi|300116246|ref|NP_001177830.1| polymerase delta-interacting protein 3 [Macaca mulatta]
gi|380786117|gb|AFE64934.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
gi|383410749|gb|AFH28588.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
gi|384942508|gb|AFI34859.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|403282846|ref|XP_003932849.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Saimiri boliviensis boliviensis]
Length = 421
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|299742555|ref|XP_001832567.2| hypothetical protein CC1G_03581 [Coprinopsis cinerea okayama7#130]
gi|298405237|gb|EAU89316.2| hypothetical protein CC1G_03581 [Coprinopsis cinerea okayama7#130]
Length = 266
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 5 LFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+F + G L + L YD SGRS G A + +E ++A +AM Q+NG+ G+PM I
Sbjct: 80 IFGQIGTLVREPVLWYDESGRSTGQAIVTFETAAEATRAMNQFNGILAKGQPMSI 134
>gi|395753496|ref|XP_002831266.2| PREDICTED: polymerase delta-interacting protein 3 [Pongo abelii]
Length = 438
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 313 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 366
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 367 MNGNVITSDQP 377
>gi|348569624|ref|XP_003470598.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 1
[Cavia porcellus]
Length = 417
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 292 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 345
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 346 MNGNVITSDQP 356
>gi|427785941|gb|JAA58422.1| Putative polymerase delta-interacting protein 3 [Rhipicephalus
pulchellus]
Length = 352
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I +LF GP+ A++ ++GTA + R+SDA+KA K YNG LDG+PM + +
Sbjct: 289 IRDLFQYIGPMHDARMV------AVGTALATFHRQSDAMKAFKAYNGRMLDGQPMNLTV 341
>gi|361068567|gb|AEW08595.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145480|gb|AFG54327.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145482|gb|AFG54328.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145484|gb|AFG54329.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145486|gb|AFG54330.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145488|gb|AFG54331.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145490|gb|AFG54332.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145492|gb|AFG54333.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145494|gb|AFG54334.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145496|gb|AFG54335.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145498|gb|AFG54336.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145500|gb|AFG54337.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145502|gb|AFG54338.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145504|gb|AFG54339.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145506|gb|AFG54340.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145508|gb|AFG54341.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145510|gb|AFG54342.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145512|gb|AFG54343.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145514|gb|AFG54344.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
Length = 67
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 32 IYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVSVLENTVPRPVARGGRGGASGGYRNGT 91
++ R SDA+ AM++YNGV LDG+PM+I++ L RG +GGY T
Sbjct: 1 VFSRNSDALAAMQRYNGVQLDGKPMKIEVVGTNLALPVLTGTSAGRGRGASMTGGYTGAT 60
Query: 92 APTYRPRGG 100
+ R RGG
Sbjct: 61 SS--RRRGG 67
>gi|149743380|ref|XP_001500767.1| PREDICTED: polymerase delta-interacting protein 3 [Equus caballus]
Length = 443
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 318 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 371
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 372 MNGNVITSDQP 382
>gi|345776780|ref|XP_003431530.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Canis
lupus familiaris]
Length = 392
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|281344756|gb|EFB20340.1| hypothetical protein PANDA_016426 [Ailuropoda melanoleuca]
Length = 401
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 276 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 329
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 330 MNGNVITSDQP 340
>gi|392865823|gb|EAS31661.2| RNA binding protein [Coccidioides immitis RS]
Length = 317
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF+ GP+ S L YDR+GRS G A + Y+R DA A+++++G G+P+++ L
Sbjct: 110 LFTGIGPILSLSLVYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPIRVTL 165
>gi|303320077|ref|XP_003070038.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109724|gb|EER27893.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 316
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF+ GP+ S L YDR+GRS G A + Y+R DA A+++++G G+P+++ L
Sbjct: 110 LFTGIGPILSLSLVYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQPIRVTL 165
>gi|427785943|gb|JAA58423.1| Putative polymerase delta-interacting protein 3 [Rhipicephalus
pulchellus]
Length = 352
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I +LF GP+ A++ ++GTA + R+SDA+KA K YNG LDG+PM + +
Sbjct: 289 IRDLFQYIGPMHDARMV------AVGTALATFHRQSDAMKAFKAYNGRMLDGQPMNLTV 341
>gi|345776778|ref|XP_531709.3| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Canis
lupus familiaris]
Length = 421
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|89267426|emb|CAJ83463.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
Length = 433
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L S G A++++ R+ DA+ A K+YN LDG+PM+ L
Sbjct: 305 IVELFCVCGALKRARLL------SPGAAEVVFVRKDDAVGAYKKYNNRYLDGQPMKCNLH 358
Query: 62 ADVSVLENTVP 72
+ SV+ + P
Sbjct: 359 LNGSVITSDQP 369
>gi|395819636|ref|XP_003783188.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Otolemur garnettii]
Length = 392
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|395819634|ref|XP_003783187.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Otolemur garnettii]
Length = 421
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|149065766|gb|EDM15639.1| polymerase (DNA-directed), delta interacting protein 3 (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 391
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|194473638|ref|NP_001123978.1| polymerase delta-interacting protein 3 [Rattus norvegicus]
gi|149065765|gb|EDM15638.1| polymerase (DNA-directed), delta interacting protein 3 (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 420
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|148672534|gb|EDL04481.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_b [Mus musculus]
Length = 391
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|74213780|dbj|BAE29328.1| unnamed protein product [Mus musculus]
Length = 391
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|74195617|dbj|BAE39617.1| unnamed protein product [Mus musculus]
Length = 429
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 305 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 358
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 359 MNGNVITSDQP 369
>gi|348511422|ref|XP_003443243.1| PREDICTED: polymerase delta-interacting protein 3-like [Oreochromis
niloticus]
Length = 479
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L +G A++++ R+ DA+ A ++YN LDG+PM+ L
Sbjct: 340 IVELFCVCGALKRARLV------KVGVAEVVFVRKEDAVSAYRKYNNRCLDGQPMKCNLH 393
Query: 62 ADVSVLENTVP 72
+V+ + P
Sbjct: 394 IQGNVITSDQP 404
>gi|70997027|ref|XP_753268.1| RNA annealing protein Yra1 [Aspergillus fumigatus Af293]
gi|66850904|gb|EAL91230.1| RNA annealing protein Yra1, putative [Aspergillus fumigatus
Af293]
gi|159127007|gb|EDP52123.1| RNA annealing protein Yra1, putative [Aspergillus fumigatus
A1163]
Length = 170
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
L Y+++G S G A +++ R A KA K+ NG+ +DGRPM+I++ D S
Sbjct: 2 LTYNQNGTSRGIASIVFSRPDTAAKAAKELNGLLVDGRPMKIEVVVDAS 50
>gi|432871062|ref|XP_004071852.1| PREDICTED: polymerase delta-interacting protein 3-like [Oryzias
latipes]
Length = 480
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L +G A++++ R+ DA+ A ++YN LDG+PM+ L
Sbjct: 341 IVELFCVCGALKRARLV------KVGVAEVVFVRKEDAVSAYRKYNNRCLDGQPMKCNLH 394
Query: 62 ADVSVLENTVP 72
+V+ + P
Sbjct: 395 IQGNVITSDQP 405
>gi|74209870|dbj|BAE30916.1| unnamed protein product [Mus musculus]
Length = 420
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|30519969|ref|NP_848742.1| polymerase delta-interacting protein 3 [Mus musculus]
gi|50401030|sp|Q8BG81.1|PDIP3_MOUSE RecName: Full=Polymerase delta-interacting protein 3; AltName:
Full=S6K1 Aly/REF-like target; Short=SKAR
gi|26349009|dbj|BAC38144.1| unnamed protein product [Mus musculus]
gi|26350863|dbj|BAC39068.1| unnamed protein product [Mus musculus]
gi|26352494|dbj|BAC39877.1| unnamed protein product [Mus musculus]
gi|55249578|gb|AAH46505.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
gi|56079151|gb|AAH58225.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
gi|77045764|gb|AAH37652.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
Length = 420
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|148672533|gb|EDL04480.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_a [Mus musculus]
Length = 420
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|431900012|gb|ELK07947.1| Polymerase delta-interacting protein 3 [Pteropus alecto]
Length = 440
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 315 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 368
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 369 MNGNVITSDQP 379
>gi|410965749|ref|XP_003989404.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Felis
catus]
Length = 392
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 267 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 320
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 321 MNGNVITSDQP 331
>gi|449511408|ref|XP_002197072.2| PREDICTED: polymerase delta-interacting protein 3-like, partial
[Taeniopygia guttata]
Length = 149
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 25 IVELFCVCGALKRARLVHP------GVAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 78
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 79 MNGNVITSDQP 89
>gi|344296314|ref|XP_003419854.1| PREDICTED: polymerase delta-interacting protein 3 [Loxodonta
africana]
Length = 420
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 295 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 348
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 349 MNGNVITSDQP 359
>gi|410965747|ref|XP_003989403.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Felis
catus]
Length = 421
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|405121707|gb|AFR96475.1| hypothetical protein CNAG_03249 [Cryptococcus neoformans var.
grubii H99]
Length = 200
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQLAAD 63
+ S GP+KS ++ Y +G+S G A +++ + DA KA Y+ +D RPM+++LA D
Sbjct: 86 MQSTVGPVKSVQMSYTATGKSTGIATVVFRNKGDARKAHASYHNRMIDNQRPMKVELAID 145
Query: 64 -----VSVLENTVPRPVARGGRGGASGGYRN 89
S++ P PV + + RN
Sbjct: 146 PNQARSSLVNRVAPAPVQPQKKRAPATKPRN 176
>gi|354493449|ref|XP_003508854.1| PREDICTED: polymerase delta-interacting protein 3 [Cricetulus
griseus]
Length = 438
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DA+ A K+YN LDG+PM+ L
Sbjct: 313 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAVTAYKKYNNRCLDGQPMKCNLH 366
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 367 MNGNVITSEQP 377
>gi|302499921|ref|XP_003011955.1| hypothetical protein ARB_01710 [Arthroderma benhamiae CBS 112371]
gi|302661576|ref|XP_003022454.1| hypothetical protein TRV_03404 [Trichophyton verrucosum HKI 0517]
gi|291175510|gb|EFE31315.1| hypothetical protein ARB_01710 [Arthroderma benhamiae CBS 112371]
gi|291186400|gb|EFE41836.1| hypothetical protein TRV_03404 [Trichophyton verrucosum HKI 0517]
Length = 171
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
L Y+++G S G A +I+ R AIKA K+ NG+ +D RP++I++ D S
Sbjct: 2 LTYNQNGTSRGIASIIFSRPETAIKAAKELNGLLIDKRPIKIEVVVDAS 50
>gi|417400646|gb|JAA47252.1| Putative rrm motif-containing protein [Desmodus rotundus]
Length = 421
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 296 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 349
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 350 MNGNVITSDQP 360
>gi|444723779|gb|ELW64409.1| Polymerase delta-interacting protein 3 [Tupaia chinensis]
Length = 395
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 270 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAIAAYKKYNNRCLDGQPMKCNLH 323
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 324 MNGNVITSDQP 334
>gi|148237123|ref|NP_001085615.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
laevis]
gi|49115681|gb|AAH73024.1| MGC82630 protein [Xenopus laevis]
Length = 405
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L S G A++++ R+ DA+ A K+YN LDG+PM+ L
Sbjct: 278 IVELFCVCGALKRARLL------SPGEAEVVFVRKDDAVGAYKKYNNRYLDGQPMKCNLH 331
Query: 62 ADVSVLENTVP 72
+ SV+ + P
Sbjct: 332 VNGSVITSDQP 342
>gi|401419082|ref|XP_003874031.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490265|emb|CBZ25525.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 347
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS FG + S+ + D SG+SLGTA + YE +A++AM+ +G+PL G+ + +Q A
Sbjct: 44 EIFSAFGNITSSMVMRDIYSGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQWA 102
>gi|146083784|ref|XP_001464834.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134068929|emb|CAM67070.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 347
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS FG + S+ + D SG+SLGTA + YE +A++AM+ +G+PL G+ + +Q A
Sbjct: 44 EIFSAFGKITSSMVMRDIYSGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQWA 102
>gi|320587464|gb|EFW99944.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 319
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
LF GP+ S +L YDR+GRS G A + YE DA +A+++++G G+P+++ +
Sbjct: 95 LFRRIGPVLSTELVYDRAGRSDGVAYVTYEIYDDAKEAIREFDGANAKGQPIRLSI 150
>gi|53749688|ref|NP_001005439.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
gi|49250533|gb|AAH74542.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
Length = 367
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L S G A++++ R+ DA+ A K+YN LDG+PM+ L
Sbjct: 239 IVELFCVCGALKRARLL------SPGAAEVVFVRKDDAVGAYKKYNNRYLDGQPMKCNLH 292
Query: 62 ADVSVLENTVP 72
+ SV+ + P
Sbjct: 293 LNGSVITSDQP 303
>gi|225680290|gb|EEH18574.1| hypothetical protein PABG_07634 [Paracoccidioides brasiliensis
Pb03]
Length = 281
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F + GP+K L Y+++G S G A + + R A KA K+ NG+ +D RP++I++
Sbjct: 121 IAEYFHKSAGPVKKVMLTYNQNGTSRGIAAITFVRPDTAAKAAKELNGLLIDKRPIKIEV 180
Query: 61 AADVS 65
D S
Sbjct: 181 VLDAS 185
>gi|440636356|gb|ELR06275.1| hypothetical protein GMDG_02069 [Geomyces destructans 20631-21]
Length = 312
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
LF+ GP+ +L YDR+GRS G A + YE DA A+++Y+G +G+P+++
Sbjct: 104 LFNRIGPVAKLELVYDRAGRSEGIAYVTYESARDASAAVREYDGANANGQPIRL 157
>gi|426195373|gb|EKV45303.1| hypothetical protein AGABI2DRAFT_194268 [Agaricus bisporus var.
bisporus H97]
Length = 243
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 LFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAA 62
+F + G L + + YDRSGRS G A + +E ++A++A KQ+NG+ G+PM + A
Sbjct: 74 IFGQIGTLIREPLIRYDRSGRSSGQAIVSFETVAEAVRAKKQFNGILAKGQPMTVDFLA 132
>gi|50289065|ref|XP_446962.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526271|emb|CAG59895.1| unnamed protein product [Candida glabrata]
Length = 443
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 36/55 (65%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+F EFG + A + D +G S+G ++I++ + D +KA + +NG ++G+ ++++
Sbjct: 236 MFKEFGDVLKANVEVDSTGMSIGVGNVIFKNQEDMVKAYEHFNGFEIEGKVLEVR 290
>gi|315053295|ref|XP_003176021.1| RNA binding domain-containing protein [Arthroderma gypseum CBS
118893]
gi|311337867|gb|EFQ97069.1| RNA binding domain-containing protein [Arthroderma gypseum CBS
118893]
Length = 175
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
L Y+++G S G A +I+ R AIKA K+ NG+ +D RP++I++ D S
Sbjct: 2 LTYNQNGTSRGIASIIFSRPETAIKAAKELNGLLIDKRPIKIEVVVDAS 50
>gi|295665073|ref|XP_002793088.1| hypothetical protein PAAG_05224 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278609|gb|EEH34175.1| hypothetical protein PAAG_05224 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 281
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F + GP+K L Y+++G S G A + + R A KA K+ NG+ +D RP++I++
Sbjct: 121 IAEYFHKSAGPVKKVMLTYNQNGTSRGIAAITFVRPDTAAKAAKELNGLLIDKRPIKIEV 180
Query: 61 AADVS 65
D S
Sbjct: 181 VLDAS 185
>gi|409077031|gb|EKM77399.1| hypothetical protein AGABI1DRAFT_115306 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 243
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 LFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAA 62
+F + G L + + YDRSGRS G A + +E ++A++A KQ+NG+ G+PM + A
Sbjct: 74 IFGQIGTLIREPLIRYDRSGRSSGQAIVSFETVAEAVRAKKQFNGILAKGQPMTVDFLA 132
>gi|406605536|emb|CCH43049.1| RNA annealing protein [Wickerhamomyces ciferrii]
Length = 226
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 16/97 (16%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG------- 53
I + F S+ G + S L Y+ G+S G A +I++ ++A KA+++YNG P+DG
Sbjct: 82 IKDFFASQVGGVASVGLSYNEKGQSKGIATIIFKSAANASKAVEKYNGAPIDGGSQKLKL 141
Query: 54 --------RPMQIQLAADVSVLENTVPRPVARGGRGG 82
RP+ ++AA+V + P+ + G + G
Sbjct: 142 ELIIDPTKRPLSSRIAANVPTTQPKGPKGLKAGSKKG 178
>gi|392562040|gb|EIW55221.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 243
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++F + G L + + YDRSGRS G A + +E ++A +A Q++G+ +PM+I
Sbjct: 71 LTQIFGQIGTLVREPLIRYDRSGRSTGVAVVTFETPAEATRAKNQFDGILAKNQPMEITY 130
Query: 61 AADVSVLENTVPRPVARGGRGGASGG 86
+T P A+G R GA+ G
Sbjct: 131 --------DTAPPASAKGPRRGANTG 148
>gi|327309500|ref|XP_003239441.1| hypothetical protein TERG_01426 [Trichophyton rubrum CBS 118892]
gi|326459697|gb|EGD85150.1| hypothetical protein TERG_01426 [Trichophyton rubrum CBS 118892]
Length = 164
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
L Y+++G S G A +I+ R AIKA K+ NG+ +D RP++I++ D S
Sbjct: 2 LTYNQNGTSRGIASIIFSRPETAIKAAKELNGLLIDKRPIKIEVVVDAS 50
>gi|119176075|ref|XP_001240165.1| hypothetical protein CIMG_09786 [Coccidioides immitis RS]
gi|303318207|ref|XP_003069103.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108789|gb|EER26958.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031722|gb|EFW13681.1| hypothetical protein CPSG_09720 [Coccidioides posadasii str.
Silveira]
gi|392864587|gb|EAS27519.2| RNA binding domain-containing protein [Coccidioides immitis RS]
Length = 240
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F + GP+K + Y+++G S G A + + R A KA K+ NG+ +D RP++I++
Sbjct: 83 IKEYFHQSAGPVKKVMVTYNQNGTSRGIASITFARPDTAAKAAKELNGLLIDKRPIKIEV 142
Query: 61 AADVS 65
D +
Sbjct: 143 VVDAA 147
>gi|355712626|gb|AES04411.1| polymerase , delta interacting protein 3 [Mustela putorius furo]
Length = 438
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DA+ A K+YN LDG+PM+ L
Sbjct: 313 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAVAAYKKYNNRCLDGQPMKCNLH 366
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 367 MNGNVITSDQP 377
>gi|440632855|gb|ELR02774.1| hypothetical protein GMDG_05718 [Geomyces destructans 20631-21]
Length = 252
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F++ G +K + Y +G+S G A++++ + A KA+ NG+ +DGRPM+I++
Sbjct: 89 IKEYFAKSVGSVKKVDISYGPNGQSRGIANIVFHKNDGASKAVAALNGLLVDGRPMKIEV 148
Query: 61 AADVS 65
D S
Sbjct: 149 LVDAS 153
>gi|344254561|gb|EGW10665.1| Polymerase delta-interacting protein 3 [Cricetulus griseus]
Length = 373
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DA+ A K+YN LDG+PM+ L
Sbjct: 248 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAVTAYKKYNNRCLDGQPMKCNLH 301
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 302 MNGNVITSEQP 312
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +LFSE G + A++ YDR +GRS G + Y S+ A+ +G +DGRP+++ +
Sbjct: 223 LLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRVNI 282
Query: 61 AAD 63
A D
Sbjct: 283 AED 285
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +LFSE G + A++ YDR +GRS G + Y S+ A+ +G +DGRP+++ +
Sbjct: 223 LLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRVNI 282
Query: 61 AAD 63
A D
Sbjct: 283 AED 285
>gi|72390836|ref|XP_845712.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176168|gb|AAX70285.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70802248|gb|AAZ12153.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261329127|emb|CBH12106.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 277
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD-- 63
F FGP+++ K+ DRSGR +GT Y +DA A++ N +DG +++ L+ D
Sbjct: 60 FEAFGPVEAYKMFTDRSGRFIGTVLCTYRNPADASAAVQHMNDQNIDGSILKVSLSRDHG 119
Query: 64 VSVLENTVPRPVARGGRGGASGG 86
V +L N A GG +GG
Sbjct: 120 VVLLHN------ADGGEQSHAGG 136
>gi|224587390|gb|ACN58656.1| Polymerase delta-interacting protein 3 [Salmo salar]
Length = 478
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L +G A++++ R+ DA+ A ++YN LDG+PM+ L
Sbjct: 343 IVELFCVCGALKRARLV------KVGIAEVVFVRKEDAVSAYRKYNNRCLDGQPMKCNLY 396
Query: 62 ADVSVLENTVP 72
+V+ + P
Sbjct: 397 IQGNVITSDQP 407
>gi|114432134|gb|ABI74675.1| POLDIP3 [Homo sapiens]
Length = 163
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 38 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 91
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 92 MNGNVITSDQP 102
>gi|327287220|ref|XP_003228327.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 2
[Anolis carolinensis]
Length = 392
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 269 IVELFCVCGALKRARLVHP------GMAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 322
Query: 62 ADVSVLENTVP 72
+ +++ + P
Sbjct: 323 MNGNIITSDQP 333
>gi|154313867|ref|XP_001556259.1| hypothetical protein BC1G_05783 [Botryotinia fuckeliana B05.10]
Length = 294
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
LF G + KL YDR+GRS G A + YE DA +A+++++G +G+P++++ D
Sbjct: 80 LFERIGRVSFLKLDYDRAGRSNGVAHVTYEDPRDAQRAIEEFDGANANGQPIRLRSVPD 138
>gi|340546029|gb|AEK51813.1| cytoplasmic poly(A) binding protein 1 [Alligator mississippiensis]
gi|402697275|gb|AFQ90825.1| polyA-binding protein cytoplasmic 1, partial [Anniella pulchra]
gi|402697277|gb|AFQ90826.1| polyA-binding protein cytoplasmic 1, partial [Chelydra serpentina]
gi|402697281|gb|AFQ90828.1| polyA-binding protein cytoplasmic 1, partial [Cyrtodactylus sp.
JJF-2012]
gi|402697287|gb|AFQ90831.1| polyA-binding protein cytoplasmic 1, partial [Draco beccarii]
gi|402697289|gb|AFQ90832.1| polyA-binding protein cytoplasmic 1, partial [Draco sumatranus]
Length = 177
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 104 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 160
>gi|327350509|gb|EGE79366.1| hypothetical protein BDDG_02305 [Ajellomyces dermatitidis ATCC
18188]
Length = 243
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F + GP+K L Y+++G S G A + + R A KA K+ NG+ +D RP++I++
Sbjct: 85 IKEYFHKSAGPVKKVMLTYNQNGTSRGIAAITFVRPDTAAKAAKELNGLLIDKRPIKIEV 144
Query: 61 AADVS 65
D S
Sbjct: 145 VLDAS 149
>gi|358057799|dbj|GAA96301.1| hypothetical protein E5Q_02967 [Mixia osmundae IAM 14324]
Length = 246
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 5 LFSEFGPLKSA-KLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
LF++ GPL + + +DRSGRSLG A + YE DA A+KQ+NG G I+++ D
Sbjct: 86 LFTQIGPLATPPSIGFDRSGRSLGWARVAYESEDDAATAIKQFNGARAKG--DIIRVSYD 143
Query: 64 VSV 66
SV
Sbjct: 144 FSV 146
>gi|62638116|gb|AAX92663.1| RBMY1 [Pan troglodytes]
Length = 146
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGGL 101
A S + RP A SG R+ + RG L
Sbjct: 83 AKKPSFQSDGRRRPPASSRNRSPSGSLRSARGSSGGTRGWL 123
>gi|351708364|gb|EHB11283.1| Polymerase delta-interacting protein 3 [Heterocephalus glaber]
Length = 296
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 171 IVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLH 224
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 225 MNGNVITSDQP 235
>gi|347832342|emb|CCD48039.1| similar to RNA binding domain-containing protein [Botryotinia
fuckeliana]
Length = 285
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
LF G + KL YDR+GRS G A + YE DA +A+++++G +G+P++++ D
Sbjct: 71 LFERIGRVSFLKLDYDRAGRSNGVAHVTYEDPRDAQRAIEEFDGANANGQPIRLRSVPD 129
>gi|157113379|ref|XP_001657804.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108877794|gb|EAT42019.1| AAEL006416-PA [Aedes aegypti]
Length = 261
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+Y++F++FGPLK A + D ++GRS G + +E DA A Q NG+ + RP+++
Sbjct: 96 LYDVFTKFGPLKKATIVLDAKTGRSRGFGFVYFESTEDARVAHTQANGIEIGDRPIRVDY 155
Query: 61 AADVSVLENT-------VPRPVARGGRGGA 83
+A + T V P RGG GGA
Sbjct: 156 SATEKPHDPTPGVYYGRVSYP-KRGGYGGA 184
>gi|328769588|gb|EGF79631.1| hypothetical protein BATDEDRAFT_89023 [Batrachochytrium
dendrobatidis JAM81]
Length = 334
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 2 IYELFS-EFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF + G L SAK+ YD SGRS G A L++ A A+ +Y+ LDG P+Q++L
Sbjct: 100 LEELFGMDQGQLLSAKIKYDTSGRSEGIATLVFTSSEAAQSAVDEYHKRELDGLPLQLEL 159
Query: 61 A 61
Sbjct: 160 T 160
>gi|255949546|ref|XP_002565540.1| Pc22g16240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592557|emb|CAP98912.1| Pc22g16240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 317
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +LF GP+ + YDR+GRS G A + Y R DA ++++Y+G G+P+++ L
Sbjct: 102 LEDLFGRIGPVSELTVSYDRAGRSEGVAFVTYARLKDAHTSIQEYDGANAKGQPIRLSL 160
>gi|19112507|ref|NP_595715.1| RNA binding protein Mlo3 [Schizosaccharomyces pombe 972h-]
gi|2498564|sp|Q09330.1|MLO3_SCHPO RecName: Full=mRNA export protein mlo3; AltName: Full=RNA-annealing
protein mlo3
gi|1597736|gb|AAB41270.1| ORF [Schizosaccharomyces pombe]
gi|2326859|emb|CAB10980.1| RNA binding protein Mlo3 [Schizosaccharomyces pombe]
Length = 199
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELF GP K L Y +GRS G A +I+ R DA +A +QY G +DG R M+++
Sbjct: 71 VKELFVKSIGPCKRVSLAYGPNGRSKGIATIIFSRPGDATRAYEQYEGRLVDGTRKMKVE 130
Query: 60 LAADVSVLENTVPRPVARGGRGGASGGYRNG 90
+ D S N++ V+ A+ +NG
Sbjct: 131 IILDPSRQLNSLAARVSPASNASATAS-KNG 160
>gi|412986331|emb|CCO14757.1| predicted protein [Bathycoccus prasinos]
Length = 290
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 2 IYELFSEFGPLKSAK-LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++F + G + AK +D +GRS G +++E + A A+ +NGV L+GRPMQI++
Sbjct: 227 LRQVFQQVGTVVDAKSTCHDDTGRSKGWGTVLFETQEQAQAAIAGFNGVELEGRPMQIKI 286
>gi|403336668|gb|EJY67528.1| UPF0171 family protein [Oxytricha trifallax]
Length = 730
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++ LF + G LK K + G+ LG+A ++Y++ DA +A++QY+G LD R + ++
Sbjct: 644 LLQRLFEKLGTLKECKFDRNNFGQFLGSATVVYDKPEDAQEAIQQYHGAQLDDRILTVEF 703
Query: 61 AADVSVLENTVPRPVARG 78
V V + + +G
Sbjct: 704 DRPVIVPKVRANNAIGKG 721
>gi|240277396|gb|EER40904.1| RNA binding domain-containing protein [Ajellomyces capsulatus
H143]
gi|325093474|gb|EGC46784.1| RNA binding domain-containing protein [Ajellomyces capsulatus
H88]
Length = 162
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 10 GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
GP+K L Y+++G S G A + + R A KA K+ NG+ +D RP++I++ D S
Sbjct: 13 GPVKKVMLTYNQNGTSRGIASITFVRPDTAAKAAKELNGLLIDKRPIKIEVVLDAS 68
>gi|451999062|gb|EMD91525.1| hypothetical protein COCHEDRAFT_1021482 [Cochliobolus
heterostrophus C5]
Length = 253
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
L YD +GRS+G+A +I+ + A KA +GV +DGRP+++++
Sbjct: 103 LQYDAAGRSVGSATIIFNKHEQAAKATAALDGVKIDGRPVRVEM 146
>gi|321260885|ref|XP_003195162.1| hypothetical protein CGB_G2160W [Cryptococcus gattii WM276]
gi|317461635|gb|ADV23375.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQLAAD 63
+ S GP+KS ++ Y +G+S G A ++++ + DA KA Y+ +D RPM+++LA D
Sbjct: 89 MQSTVGPVKSVQMSYTATGKSTGIATVVFKNKGDARKAHASYHNRMIDNQRPMKVELAID 148
Query: 64 -----VSVLENTVPRPVARGGRGGASGGYRN 89
S++ P P + + RN
Sbjct: 149 PNQARSSLVNRVAPAPAQPQKKRAPASKPRN 179
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 227 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 283
>gi|410060051|ref|XP_003949287.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
A1-like [Pan troglodytes]
Length = 184
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGGL 101
A S + RP A SG R+ + RG L
Sbjct: 83 AKKPSFQSDGRRRPPASSRNRSPSGSLRSARGSSGGTRGWL 123
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LFS FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LQDLFSRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYV 263
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSG-RSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S +++ DR+ RSLG A + +++ DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALDTMNFDVIKGKPVRI 84
>gi|353241355|emb|CCA73175.1| related to YRA1-RNA annealing protein [Piriformospora indica DSM
11827]
Length = 248
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MIYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQI 58
I ELF + GP KS L Y+ G+S G A +I+ A KA QYN +DG R M+I
Sbjct: 103 QIKELFNTTVGPTKSCILQYNAQGKSSGHATVIFREAGSAQKAFDQYNNRLIDGKRAMRI 162
Query: 59 QLAAD 63
++ D
Sbjct: 163 EIVVD 167
>gi|320583237|gb|EFW97452.1| RNA-binding RNA annealing protein, putative; mRNA export protein,
putative [Ogataea parapolymorpha DL-1]
Length = 219
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
+ E F S+ G +K+ L Y+ G+S G A +I+++ A KA++ YNG P+DG
Sbjct: 83 VKEFFQSQIGGVKTVSLSYNEKGQSKGIATVIFQKSKQAQKAVESYNGAPIDG 135
>gi|157121121|ref|XP_001659835.1| RNA and export factor binding protein 2-I, putative [Aedes aegypti]
gi|108874699|gb|EAT38924.1| AAEL009222-PA [Aedes aegypti]
Length = 273
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+Y++F++FGPLK A + D ++GRS G + +E DA A Q NG+ + RP+++
Sbjct: 107 LYDVFTKFGPLKKATIVLDAKTGRSRGFGFVYFESTEDARVAHTQANGIEIGDRPIRVDY 166
Query: 61 AADVSVLENT-------VPRPVARGGRGGA 83
+A + T V P RGG GGA
Sbjct: 167 SATEKPHDPTPGVYYGRVSYP-KRGGYGGA 195
>gi|226293535|gb|EEH48955.1| hypothetical protein PADG_05034 [Paracoccidioides brasiliensis
Pb18]
Length = 376
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 10 GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
GP+K L Y+++G S G A + + R A KA K+ NG+ +D RP++I++ D S
Sbjct: 158 GPVKKVMLTYNQNGTSRGIAAITFVRPDTAAKAAKELNGLLIDKRPIKIEVVLDAS 213
>gi|157867739|ref|XP_001682423.1| hypothetical protein LMJF_18_0170 [Leishmania major strain
Friedlin]
gi|68125877|emb|CAJ03470.1| hypothetical protein LMJF_18_0170 [Leishmania major strain
Friedlin]
Length = 347
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS FG + S+ + D +G+SLGTA + YE +A++AM+ +G+PL G+ + +Q A
Sbjct: 44 EIFSAFGKITSSMVMRDIYNGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQWA 102
>gi|154795153|gb|ABS86609.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
gi|154795157|gb|ABS86611.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 127
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLD-GRPMQIQLAAD 63
+ GP+ L YD G+S GTA + ++R DA KA +QYN +D RPM++++ D
Sbjct: 3 TTVGPVIKVALSYDNRGQSKGTAQVEFKRNDDATKAFQQYNKRLIDQNRPMKVEIILD 60
>gi|225556858|gb|EEH05145.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 346
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 10 GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
GP+K L Y+++G S G A + + R A KA K+ NG+ +D RP++I++ D S
Sbjct: 197 GPVKKVMLTYNQNGTSRGIASITFVRPDTAAKAAKELNGLLIDKRPIKIEVVLDAS 252
>gi|402697297|gb|AFQ90836.1| polyA-binding protein cytoplasmic 1, partial [Testudo hermanni]
Length = 176
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 104 LKELFGXFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYV 160
>gi|157121123|ref|XP_001659836.1| RNA and export factor binding protein 2-I, putative [Aedes aegypti]
gi|108874700|gb|EAT38925.1| AAEL009222-PB [Aedes aegypti]
Length = 272
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+Y++F++FGPLK A + D ++GRS G + +E DA A Q NG+ + RP+++
Sbjct: 107 LYDVFTKFGPLKKATIVLDAKTGRSRGFGFVYFESTEDARVAHTQANGIEIGDRPIRVDY 166
Query: 61 AADVSVLENT-------VPRPVARGGRGGA 83
+A + T V P RGG GGA
Sbjct: 167 SATEKPHDPTPGVYYGRVSYP-KRGGYGGA 195
>gi|389747630|gb|EIM88808.1| hypothetical protein STEHIDRAFT_145663 [Stereum hirsutum FP-91666
SS1]
Length = 271
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ +F + G L + + YDRSGRS G A + +E S+A KA +Q+ GV G+P+ I+
Sbjct: 61 LTAIFGQIGTLVREPLIKYDRSGRSTGVAIIAFETASEAAKAKEQFQGVLAKGQPISIE 119
>gi|154335413|ref|XP_001563945.1| hypothetical protein, unknown function [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060976|emb|CAM37994.1| hypothetical protein, unknown function [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 347
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 5 LFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+FS FG + S+ + D SG+SLGTA + YE+ +A++A++ +G+PL G+ + +Q A
Sbjct: 38 IFSAFGNITSSMVMRDIYSGQSLGTAFVRYEKHEEALRALRDAHGMPLLGKTVSVQWA 95
>gi|153809381|ref|ZP_01962049.1| hypothetical protein BACCAC_03695 [Bacteroides caccae ATCC 43185]
gi|423221052|ref|ZP_17207546.1| hypothetical protein HMPREF1061_04319 [Bacteroides caccae
CL03T12C61]
gi|149127967|gb|EDM19189.1| hypothetical protein BACCAC_03695 [Bacteroides caccae ATCC 43185]
gi|392622291|gb|EIY16423.1| hypothetical protein HMPREF1061_04319 [Bacteroides caccae
CL03T12C61]
Length = 99
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 5 LFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
LF+EFG + SAK+ +DR SGRS G A + ++ KA+ + NGV D Q
Sbjct: 20 LFAEFGEVSSAKVIFDRESGRSRGFAFVEMPNDTEGQKAIDELNGVEYD------QKVIS 73
Query: 64 VSVLENTVPRPVARGGRGG 82
VSV RP GGRGG
Sbjct: 74 VSVARPRTERPSHGGGRGG 92
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 143 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 199
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 98 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 154
>gi|320580860|gb|EFW95082.1| poly(A+) RNA-binding protein, putative [Ogataea parapolymorpha
DL-1]
Length = 405
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +LF GP+ A + D GRS G +I+E DA +A+ +NG +DGR ++++L
Sbjct: 185 LKDLFKSCGPIIRADVREDHRGRSKGFGTVIFENSEDADRAIADFNGYDMDGRRIEVRL 243
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 222 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 278
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS++GP S ++ D SG+S G + +ER DA KA+ + NG L+GR
Sbjct: 207 LKELFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGR 259
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + GRP++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPLRI 84
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
LFS+FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 210 LFSKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYV 263
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSG-RSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S +++ DR+ RSLG A + +++ DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALDTMNFDVIKGKPVRI 84
>gi|169599889|ref|XP_001793367.1| hypothetical protein SNOG_02770 [Phaeosphaeria nodorum SN15]
gi|160705342|gb|EAT89501.2| hypothetical protein SNOG_02770 [Phaeosphaeria nodorum SN15]
Length = 328
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF+ G ++ A++ Y+ +GRS GT + +E++ DA A+ ++ G GRP+ +Q
Sbjct: 243 LVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKQEDAETAIAKFTGYQYGGRPLGLQFV 302
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
++ E+FSE G L AK+ +DR +GRS G + + +S+A A+ NG L+GR M++
Sbjct: 231 ILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVASLNGKELEGRAMRVD 290
Query: 60 LA 61
LA
Sbjct: 291 LA 292
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|134058021|emb|CAK38250.1| unnamed protein product [Aspergillus niger]
Length = 333
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y DA A+++++G G+P+++ L
Sbjct: 102 LEDLFTRIGPISNVSLVYDRAGRSEGVAFVTYTHIGDARTAIREFDGANAKGQPIRLTLI 161
Query: 62 A 62
+
Sbjct: 162 S 162
>gi|320589410|gb|EFX01871.1| arginine serine-rich protein [Grosmannia clavigera kw1407]
Length = 332
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+YE+F +FG ++ L R SG + GTA ++Y DA A+ + LDG + + +
Sbjct: 107 LYEIFGQFGHIRDLDLPISRISGTNRGTAYILYVEELDAEAAIAHMHEAQLDGATINVSI 166
Query: 61 AADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGGLKKTL 105
V + P P RG GG+ N AP PRGG + L
Sbjct: 167 ---VLPRQKFSPPPPLAARRG---GGFNNRNAPNAAPRGGRRLCL 205
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 LFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+F FG + S +LH D +GRS G + Y+ DA KA +Q NG+ L GRP+++ LA
Sbjct: 325 IFEPFGEVISLQLHKDPETGRSRGFGFVQYKNHEDAKKAFEQLNGLDLAGRPLKVGLA 382
>gi|425774301|gb|EKV12610.1| RNA binding protein, putative [Penicillium digitatum Pd1]
gi|425776302|gb|EKV14524.1| RNA binding protein, putative [Penicillium digitatum PHI26]
Length = 345
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+LF GP+ + YDR+GRS G A + Y R DA ++++Y+G G+P+++ L
Sbjct: 129 DLFGRIGPVSELTVSYDRAGRSEGVAYITYARLKDAHTSIQEYDGANAKGQPIRLSL 185
>gi|403160007|ref|XP_003320572.2| hypothetical protein PGTG_02594 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169372|gb|EFP76153.2| hypothetical protein PGTG_02594 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 221
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 MIYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLD-GRPMQI 58
I ELF + G + L YD G S G A + ++R DA KA +QYN +D RPM++
Sbjct: 87 QIRELFNTTVGHVTRVTLSYDNRGASKGIAQVEFKRNEDATKAFQQYNKRLIDQNRPMKV 146
Query: 59 QLAADVS 65
++ D S
Sbjct: 147 EIVVDPS 153
>gi|1843458|gb|AAB81555.1| Rbm [Mus musculus]
Length = 380
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+F FGP+ L DR + +S G A L + R +DA A+K+ NGV LDG+ ++++
Sbjct: 23 TLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEMNGVILDGKRIKVK 82
Query: 60 LAADVSVLEN 69
A S LE+
Sbjct: 83 QARRPSSLES 92
>gi|332870647|ref|XP_003319028.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 2 [Pan troglodytes]
Length = 460
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVARG----------GRGGASGGYRNGTAPTY 95
A S + RP A GG+SGG R G P++
Sbjct: 83 AKKPSFQSDCRRRPPASSRNRSPSGSLRSAGGSSGGTR-GWLPSH 126
>gi|86171081|ref|XP_966143.1| RNA and export factor binding protein, putative [Plasmodium
falciparum 3D7]
gi|46361108|emb|CAG25395.1| RNA and export factor binding protein, putative [Plasmodium
falciparum 3D7]
Length = 156
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 38/57 (66%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
ELFS + +A ++YD + RS GTA ++E +DA KA+ +Y+G ++G +++++
Sbjct: 82 ELFSNVCKVVNAWINYDHTDRSNGTAVCVFENINDAQKAIDKYDGSEIEGLSIKMEI 138
>gi|317028251|ref|XP_001390338.2| alpha-actinin, sarcomeric (f-actin cross linking protein)
[Aspergillus niger CBS 513.88]
Length = 915
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ +LF+ GP+ + L YDR+GRS G A + Y DA A+++++G G+P+++ L
Sbjct: 684 LEDLFTRIGPISNVSLVYDRAGRSEGVAFVTYTHIGDARTAIREFDGANAKGQPIRLTLI 743
Query: 62 A 62
+
Sbjct: 744 S 744
>gi|395394008|ref|NP_001257441.1| RNA-binding motif protein, Y chromosome, family 1 member B [Mus
musculus]
gi|341942161|sp|Q60990.3|RBY1B_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B; AltName: Full=RNA-binding motif protein 1
Length = 380
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+F FGP+ L DR + +S G A L + R +DA A+K+ NGV LDG+ ++++
Sbjct: 23 TLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEMNGVILDGKRIKVK 82
Query: 60 LAADVSVLEN 69
A S LE+
Sbjct: 83 QARRPSSLES 92
>gi|395394021|ref|NP_001257447.1| predicted gene 4064 [Mus musculus]
Length = 380
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+F FGP+ L DR + +S G A L + R +DA A+K+ NGV LDG+ ++++
Sbjct: 23 TLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVK 82
Query: 60 LAADVSVLEN 69
A S LE+
Sbjct: 83 QARRPSSLES 92
>gi|2564280|emb|CAA75403.1| RNA-binding protein [Mus musculus]
Length = 380
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+F FGP+ L DR + +S G A L + R +DA A+K+ NGV LDG+ ++++
Sbjct: 23 TLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVK 82
Query: 60 LAADVSVLEN 69
A S LE+
Sbjct: 83 QARRPSSLES 92
>gi|326471670|gb|EGD95679.1| hypothetical protein TESG_08401 [Trichophyton tonsurans CBS 112818]
Length = 321
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 10 GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
G + Y+++G S G A +I+ R AIKA K+ NG+ +D RP++I++ D S
Sbjct: 152 GTCQEGHATYNQNGTSRGIASIIFSRPETAIKAAKELNGLLIDKRPIKIEVVVDAS 207
>gi|261824019|ref|NP_035383.2| RNA-binding motif protein, Y chromosome, family 1 member A1 [Mus
musculus]
gi|261824021|ref|NP_001159856.1| RNA-binding motif protein, Y chromosome, family 1 member A1 [Mus
musculus]
gi|395394010|ref|NP_001257442.1| predicted gene, 21677 [Mus musculus]
gi|395394015|ref|NP_001257444.1| predicted gene, 21704 [Mus musculus]
gi|395394017|ref|NP_001257445.1| predicted gene, 21708 [Mus musculus]
gi|341941874|sp|O35698.2|RBY1A_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member A1; AltName: Full=RNA-binding motif protein 1;
AltName: Full=Y chromosome RNA recognition motif 1
Length = 380
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+F FGP+ L DR + +S G A L + R +DA A+K+ NGV LDG+ ++++
Sbjct: 23 TLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVK 82
Query: 60 LAADVSVLEN 69
A S LE+
Sbjct: 83 QARRPSSLES 92
>gi|395394001|ref|NP_001257439.1| predicted gene 10256 [Mus musculus]
gi|395394006|ref|NP_001257440.1| predicted gene 10352 [Mus musculus]
gi|187956457|gb|AAI50671.1| Rbmy1a1 protein [Mus musculus]
Length = 380
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+F FGP+ L DR + +S G A L + R +DA A+K+ NGV LDG+ ++++
Sbjct: 23 TLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVK 82
Query: 60 LAADVSVLEN 69
A S LE+
Sbjct: 83 QARRPSSLES 92
>gi|395394012|ref|NP_001257443.1| predicted gene, 21693 [Mus musculus]
Length = 380
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+F FGP+ L DR + +S G A L + R +DA A+K+ NGV LDG+ ++++
Sbjct: 23 TLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVK 82
Query: 60 LAADVSVLEN 69
A S LE+
Sbjct: 83 QARRPSSLES 92
>gi|308478345|ref|XP_003101384.1| hypothetical protein CRE_13466 [Caenorhabditis remanei]
gi|308263285|gb|EFP07238.1| hypothetical protein CRE_13466 [Caenorhabditis remanei]
Length = 214
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF ++ P + +LH+D +G SLGTADL+ + AI K GV LDG+ ++
Sbjct: 112 LEELFEQYQP-EVVQLHFDAAGASLGTADLVVPQPQVAI-IRKALEGVLLDGQQIE---- 165
Query: 62 ADVSVLENTVPRPVA 76
VLE V +PV+
Sbjct: 166 ----VLETNVAKPVS 176
>gi|193591791|ref|XP_001951805.1| PREDICTED: hypothetical protein LOC100164360 [Acyrthosiphon pisum]
Length = 443
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF++ G L +K+ G A++IY RR+DAI+A+ Y+ LDGRPM+ +
Sbjct: 342 IRELFADIGDLLESKVIRP------GVAEVIYNRRADAIQAVDVYHNRQLDGRPMKCDMV 395
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+ +F FG ++ +L D +GRS G + + DA KAM+Q NG L GRPM+I
Sbjct: 125 MLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNGFELAGRPMKI 183
>gi|390599218|gb|EIN08615.1| hypothetical protein PUNSTDRAFT_52947 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 128
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
+ ELF+ GPL+ L YD +GRS G A ++++R+ D KA QY+ +DG
Sbjct: 75 LKELFTTTIGPLRDVTLTYDHNGRSKGVATILFQRKGDGSKAYAQYHNRLIDG 127
>gi|332870645|ref|XP_003319027.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 1 [Pan troglodytes]
Length = 497
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVARG----------GRGGASGGYRNGTAPTY 95
A S + RP A GG+SGG R G P++
Sbjct: 83 AKKPSFQSDCRRRPPASSRNRSPSGSLRSAGGSSGGTR-GWLPSH 126
>gi|157278157|ref|NP_001098178.1| transformer 2a [Oryzias latipes]
gi|49204524|dbj|BAD24698.1| transformer-2a2 [Oryzias latipes]
gi|49204534|dbj|BAD24700.1| transformer-2a4 [Oryzias latipes]
Length = 186
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GPL + YD+ S RS G A + +E D+ +A +Q NG+ LDGR +++ +
Sbjct: 36 EVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGMELDGRRIRVDFS 94
>gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzias latipes]
gi|49204529|dbj|BAD24699.1| transformer-2a3 [Oryzias latipes]
Length = 283
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS++GPL + YD+ S RS G A + +E D+ +A +Q NG+ LDGR +++
Sbjct: 131 LREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGMELDGRRIRVDF 190
Query: 61 A 61
+
Sbjct: 191 S 191
>gi|449544466|gb|EMD35439.1| hypothetical protein CERSUDRAFT_116201 [Ceriporiopsis subvermispora
B]
Length = 243
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ LF++ GP+K L Y+ GRS G A + ++R +DA A +YNG +DG RP++I+
Sbjct: 69 VQVLFAKTVGPVKDVFLVYNSQGRSKGMAVVTFQRSADATVARTRYNGKIVDGKRPIKIE 128
Query: 60 LAAD 63
+ D
Sbjct: 129 IIVD 132
>gi|395325535|gb|EJF57956.1| hypothetical protein DICSQDRAFT_91511 [Dichomitus squalens LYAD-421
SS1]
Length = 253
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ++F + G L + ++ YDRSGRS G A + +E ++A +A KQ++G+ +PM I
Sbjct: 72 LSQIFGQIGTLVREPQIRYDRSGRSSGVAVITFETPAEATRAKKQFDGILAKNQPMSI 129
>gi|346471403|gb|AEO35546.1| hypothetical protein [Amblyomma maculatum]
Length = 271
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS++GPL+ ++ YD +SGRS G A + +E DA A + NG+ +DGR +++
Sbjct: 141 LKEVFSKYGPLEDVQVVYDAQSGRSRGFAFVYFETVEDAKAAKDRCNGLEIDGRKIRVDY 200
Query: 61 A 61
+
Sbjct: 201 S 201
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 LFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
LFS +G + AK+ YDR SGRS G + E+ DA AM+ +G LDGR +++ A +
Sbjct: 146 LFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNFAGE 205
>gi|400600157|gb|EJP67848.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 251
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 1 MIYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
I E F + GP+K +L Y + +S G A++++ + A +A ++ NG+ +DGRP++I+
Sbjct: 82 QIKEYFVQSVGPIKRVELSYGPNSQSRGIANVLFHKPDGASRAFQKLNGLLVDGRPIKIE 141
Query: 60 LAADVSVLENTVP 72
+ + + +P
Sbjct: 142 IVVGAAQADKVIP 154
>gi|402594130|gb|EJW88056.1| hypothetical protein WUBG_01033 [Wuchereria bancrofti]
Length = 253
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF ++ + S ++YD G S+GTAD++ +R S A + + NGV LDG+ M +
Sbjct: 114 LNELFEKYSVI-SVNVNYDEMGVSVGTADVVTDRVS-AAEIVANLNGVALDGKVMSFHMI 171
Query: 62 ADVSVLEN 69
D +V N
Sbjct: 172 DDQTVQAN 179
>gi|388858137|emb|CCF48205.1| related to YRA1-RNA annealing protein [Ustilago hordei]
Length = 235
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELF + GPL+ + Y +G+S G + Y+R DA +A QYN +DG +P++++
Sbjct: 92 VKELFATTIGPLRKVAMSYRANGQSTGVCTVEYQRADDAARAYTQYNNRLIDGKKPLKVE 151
Query: 60 LAAD 63
+ D
Sbjct: 152 VVVD 155
>gi|340546031|gb|AEK51814.1| cytoplasmic poly(A) binding protein 1 [Heteronotia binoei]
Length = 177
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 104 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 160
>gi|154345147|ref|XP_001568515.1| putative poly(A)-binding protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065852|emb|CAM43630.1| putative poly(A)-binding protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 579
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ ELFS+FG L + L D G S G A + +ER A++A+K+ +G+ +DG+ + ++
Sbjct: 111 LKELFSKFGRLTAIGLACDEKGESRGYARISFEREESAVEAVKEMDGMEMDGQAIVVE 168
>gi|427787637|gb|JAA59270.1| Putative transformer 2 alpha log [Rhipicephalus pulchellus]
Length = 267
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GPL+ ++ YD +SGRS G A + +E DA A + NG+ +DGR +++ +
Sbjct: 141 EVFSKYGPLEDVQVVYDAQSGRSRGFAFVYFESVDDAKMAKDRCNGLEIDGRKIRVDYS 199
>gi|296411247|ref|XP_002835345.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629123|emb|CAZ79502.1| unnamed protein product [Tuber melanosporum]
Length = 348
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
F G + +L YDR+GRS G A + YER +DA +A+ +++G +G+P+ + L
Sbjct: 109 FERQGVVLKLELKYDRAGRSEGIAFVTYEREADAKRAIAEFDGANANGQPIHLTL 163
>gi|268551865|ref|XP_002633914.1| Hypothetical protein CBG19980 [Caenorhabditis briggsae]
Length = 213
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF ++ P + +LH+D +G SLGTADL+ + A+ K GV LDG+
Sbjct: 114 LEELFDQYHP-EVVQLHFDSAGASLGTADLVVPQPQVAL-IQKALEGVLLDGQ------- 164
Query: 62 ADVSVLENTVPRPVA 76
+ VLE V +PV+
Sbjct: 165 -QIEVLETNVAKPVS 178
>gi|281202262|gb|EFA76467.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 270
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAA 62
+LF E+G +++ L+YDR +G + G A + YE+ S+A A+K+ + L G+P+ + A
Sbjct: 102 DLFCEYGAIRNMHLNYDRRTGFTKGYALIEYEQESEASAAIKESEKIELAGKPLTVDFAF 161
Query: 63 DVSVLENTVP------RPVARGGRGGASG 85
SV +T P R GGR G
Sbjct: 162 VQSV--DTTPTHTIQLRSTRTGGRRSTGG 188
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFSE G + AK+ YDR SGRS G + Y + A+ NGV LDGR +++
Sbjct: 223 LKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSA 282
Query: 61 AAD 63
A +
Sbjct: 283 AEE 285
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 5 LFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
LF G ++ ++ YD+ +GRS G + + + A +Q+NG +DGR +++
Sbjct: 106 LFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRV----- 160
Query: 64 VSVLENTVPRPVAR------GGRGGAS--GGYRNGTAPTYRPRGG 100
N P P R GGRGG S GG R+G + RGG
Sbjct: 161 -----NAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGG 200
>gi|358253500|dbj|GAA53299.1| polymerase delta-interacting protein 3 [Clonorchis sinensis]
Length = 172
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
++ELFS G L+ L G A++++ SDA +A+++YN LDGRPM + L
Sbjct: 36 VFELFSSIGTLRLCNLIRP------GHAEVVFNEASDAREAVRRYNNRELDGRPMNVALI 89
Query: 62 ADV 64
V
Sbjct: 90 TQV 92
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ E+FS++GPL S K+ D SG+S G + +E +DA +A+++ NG GR + + A
Sbjct: 215 LLEIFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHADAKRAIEEVNGKQFGGRKIYVSRA 274
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S ++ D S RSLG + + R DA A+ N L G+P++I
Sbjct: 34 MLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGHALNTMNFDVLHGKPVRIM 93
Query: 60 LA 61
Sbjct: 94 WC 95
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|409048571|gb|EKM58049.1| hypothetical protein PHACADRAFT_206888 [Phanerochaete carnosa
HHB-10118-sp]
Length = 234
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++F G L + + YDRSGRS G A + YE ++A +A+ QYNG G+PM I+
Sbjct: 71 LTQVFGIIGTLVREPLIRYDRSGRSTGIAIISYETAAEAKQALAQYNGKLCKGQPMSIEF 130
>gi|307108421|gb|EFN56661.1| hypothetical protein CHLNCDRAFT_57546 [Chlorella variabilis]
Length = 242
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 23 GRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
GRS GTA++I+E A +AM++YN V LDG MQI+L
Sbjct: 140 GRSEGTAEVIFEDAGHAERAMRKYNNVQLDGNAMQIEL 177
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSG-RSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+++LFS+ P+ S ++ D++G SLG A + + DA KAM+ N PL+G+P++I
Sbjct: 49 LFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAMEVLNFTPLNGKPIRIMF 108
Query: 61 A 61
+
Sbjct: 109 S 109
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+YE F+ FGP+ S K+ D +G+S G + +E DA A+ + NG+ ++ R + +
Sbjct: 137 LYETFASFGPVLSCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYV 193
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFSEFG + S K+ D+ G S G+ + + +A +A+ + NG + +P+ + +A
Sbjct: 331 LKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVAIA 390
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+ +F FG + + ++ D SG S G A + + DA +AM+Q NG L GRPM++
Sbjct: 284 MLRRIFEPFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRPMKV 341
>gi|242022922|ref|XP_002431886.1| hypothetical protein Phum_PHUM556460 [Pediculus humanus corporis]
gi|212517227|gb|EEB19148.1| hypothetical protein Phum_PHUM556460 [Pediculus humanus corporis]
Length = 446
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF + G L S+K+ GTA+++Y+ DA+KA+ Y+ LDG+PM+ L
Sbjct: 357 VKELFEDIGELISSKVVRP------GTAEVVYKLHKDAVKAVDVYHNRQLDGQPMKCLLV 410
Query: 62 ADVSVLENTVPRPVARG 78
+ S L+ V R + +
Sbjct: 411 NNRSTLKGGVDRKLGKA 427
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 253 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 309
>gi|154335411|ref|XP_001563944.1| hypothetical protein, unknown function [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060975|emb|CAM37993.1| hypothetical protein, unknown function [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 347
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 5 LFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+FS FG + S+ + D SG+SLGTA + YE+ +A++A++ +G+PL G+ + +Q A
Sbjct: 45 IFSAFGNITSSMVMRDIYSGQSLGTAFVRYEKHEEALRALRDAHGMPLLGKTVSVQWA 102
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFS FG + S K+ D++G S G+ + + R +A +A+ + NG + G+P+ + A
Sbjct: 332 LCELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFA 391
Query: 62 A----DVSVLENTVPRPV 75
++L+ TV +PV
Sbjct: 392 QRKEDRKAMLQVTVLKPV 409
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
++E FS FG + S K+ D +G+S G + Y++ A A+K NG+ ++ +P+ +
Sbjct: 138 LHETFSSFGTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDKPVFV 194
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+YELFS+ G + S ++ D S RSLG A + Y DA +A++ N L+ +P+++
Sbjct: 50 LYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEVLNFAALNNKPIRV 107
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF FGP S K+ D SG+S G + +ER DA KA+++ NG L+G+ + +
Sbjct: 207 LQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYV 263
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S +++ DR + RSLG A + +++ DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALDTMNFDVIKGKPVRIM 85
Query: 60 LA 61
+
Sbjct: 86 WS 87
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 209 DLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIM 85
Query: 60 LA 61
+
Sbjct: 86 WS 87
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 209 DLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIM 85
Query: 60 LA 61
+
Sbjct: 86 WS 87
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|41055454|ref|NP_956710.1| transformer-2 protein homolog alpha [Danio rerio]
gi|32451924|gb|AAH54632.1| Transformer-2 alpha [Danio rerio]
Length = 297
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +G L + YD R+GRS G A + +E DA +AM++ NG+ LDGR +++ +
Sbjct: 153 EVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYS 211
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF FGP S K+ D SG+S G + +ER DA KA+++ NG L+G+ + +
Sbjct: 207 LQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYV 263
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S +++ DR + RSLG A + +++ DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALDTMNFDVIKGKPVRIM 85
Query: 60 LA 61
+
Sbjct: 86 WS 87
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 136 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 192
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 182 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 238
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 1 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 59
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 136 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 192
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 162 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 218
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+++ FS FG + SAK+ + GRS G + + +A KA+ + NG + +P+ + LA
Sbjct: 310 LWKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 142 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 194
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+ +F FG + + ++ D SG S G A + + DA +AM+Q NG L GRPM++
Sbjct: 367 MLRRIFEPFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRPMKV 424
>gi|170585021|ref|XP_001897287.1| RNA binding protein [Brugia malayi]
gi|158595310|gb|EDP33874.1| RNA binding protein, putative [Brugia malayi]
Length = 256
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
ELF ++ + S ++YD G S+GTAD++ +R S A + + NGV LDG+ M + D
Sbjct: 119 ELFEKYSVI-SVNVNYDEMGASVGTADVVTDRVS-ATEIVANLNGVALDGKVMSFHMIDD 176
Query: 64 VSV 66
+V
Sbjct: 177 QTV 179
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 143 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 199
>gi|335775987|gb|AEH58755.1| polyadenylate-binding protein 1-like protein [Equus caballus]
Length = 510
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 81 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 133
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 148 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 204
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 170 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 226
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 243 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 299
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 136 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 188
>gi|332870655|ref|XP_003319032.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J isoform 2 [Pan troglodytes]
Length = 460
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVA 76
A S + RP A
Sbjct: 83 AKKPSFQSDGRRRPPA 98
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 211 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 267
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D+ + RSLG A + Y++ DA +A++ N + GRP++I
Sbjct: 26 MLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRI 84
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 374 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 426
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F FG +++ ++ D SG S G A + + D +AM+Q NG L GRPM++
Sbjct: 392 MLGRIFDPFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRPMKV-- 449
Query: 61 AADVSVLENTVPRPV 75
SV + +P PV
Sbjct: 450 ---CSVEGDELPPPV 461
>gi|332870651|ref|XP_003319030.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J-like isoform 2 [Pan troglodytes]
Length = 460
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVA 76
A S + RP A
Sbjct: 83 AKKPSFQSDGRRRPPA 98
>gi|351695842|gb|EHA98760.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 709
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 297 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 349
>gi|332870664|ref|XP_003319035.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J isoform 3 [Pan troglodytes]
Length = 460
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVA 76
A S + RP A
Sbjct: 83 AKKPSFQSDGRRRPPA 98
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S +L D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVELMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 209 DLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIM 85
Query: 60 LA 61
+
Sbjct: 86 WS 87
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|221058014|ref|XP_002261515.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247520|emb|CAQ40920.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 153
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFS + +A ++YD + RS GT ++E +DA KA+ +Y+G ++G +++++
Sbjct: 79 ELFSNVCKVVNAWINYDHTDRSDGTGVCVFENINDAQKAIDKYDGSEIEGMAIKMEIV 136
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|170099594|ref|XP_001881015.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643694|gb|EDR07945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 130
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 1 MIYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
I ELF+ GPL+ LHYD GRS G A + + + D A +QYN +DG
Sbjct: 76 QIKELFTTTVGPLRDVTLHYDAGGRSKGVASVQFSNKGDGEVAYQQYNNRLIDG 129
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELFS++GP S ++ D SG+S G + +ER DA KA+ NG L+GR + +
Sbjct: 194 LKELFSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYV 250
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ +
Sbjct: 136 LKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 190
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 44 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 95
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 227 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 279
>gi|358388994|gb|EHK26587.1| hypothetical protein TRIVIDRAFT_188853 [Trichoderma virens Gv29-8]
Length = 256
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F + GP+K +L Y + +S G A++ + + A KA++ NG+ +DGRP++I++
Sbjct: 86 IKEYFVQSVGPIKKVELSYGPNSQSRGIANVTFSKPEGASKALQTLNGLLVDGRPIKIEI 145
Query: 61 AADVSVLENTVP 72
+ + +P
Sbjct: 146 IVGAAQADKVIP 157
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D+ + RSLG A + Y++ D+ +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSERALDTMNFDVIKGKPVRI 84
>gi|194386544|dbj|BAG61082.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 175 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 227
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
>gi|332870649|ref|XP_003319029.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J-like isoform 1 [Pan troglodytes]
Length = 506
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVA 76
A S + RP A
Sbjct: 83 AKKPSFQSDGRRRPPA 98
>gi|392589022|gb|EIW78353.1| hypothetical protein CONPUDRAFT_167377 [Coniophora puteana
RWD-64-598 SS2]
Length = 236
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELF + GPL+ + Y+ GRS G A + ++R +DA A ++Y+G +DG RP++I+
Sbjct: 69 VEELFKKTVGPLREVFMIYNSQGRSKGMAVVAFQRAADAQVARQRYDGKYIDGRRPIKIE 128
Query: 60 LAAD 63
+ D
Sbjct: 129 IIVD 132
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+
Sbjct: 175 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 227
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F FG +++ ++ D SG S G A + + D +AM+Q NG L GRPM++
Sbjct: 270 MLGRIFDPFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRPMKV-- 327
Query: 61 AADVSVLENTVPRPV 75
SV + +P PV
Sbjct: 328 ---CSVEGDELPPPV 339
>gi|115520925|gb|ABJ08845.1| putative polyadenylate-binding protein 1 [Squalus acanthias]
Length = 212
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ E+F++FG S K+ D SGRS G + +E+ DA KA+ + NG ++GR + +
Sbjct: 139 LKEIFNKFGAFLSVKVMTDDSGRSKGFGFVSFEKHEDAQKAVDEMNGKEINGRQVYV 195
>gi|241655012|ref|XP_002411352.1| transformer-2 protein C, putative [Ixodes scapularis]
gi|215503982|gb|EEC13476.1| transformer-2 protein C, putative [Ixodes scapularis]
Length = 258
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GPL+ ++ YD +SGRS G + + +E DA A + NG+ +DGR +++ +
Sbjct: 123 EVFSKYGPLEDVQVVYDAQSGRSRGFSFVYFENVEDAKAAKDRCNGLEIDGRKIRVDYS 181
>gi|332870653|ref|XP_003319031.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J isoform 1 [Pan troglodytes]
Length = 497
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVA 76
A S + RP A
Sbjct: 83 AKKPSFQSDGRRRPPA 98
>gi|119579519|gb|EAW59115.1| hCG19443 [Homo sapiens]
Length = 93
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F ++GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKYGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 A 61
A
Sbjct: 83 A 83
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F FG +++ ++ D SG S G A + + D +AM+Q NG L GRPM++
Sbjct: 215 MLGRIFDPFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRPMKV-- 272
Query: 61 AADVSVLENTVPRPV 75
SV + +P PV
Sbjct: 273 ---CSVEGDELPPPV 284
>gi|443895426|dbj|GAC72772.1| uncharacterized protein PANT_7d00265 [Pseudozyma antarctica T-34]
Length = 265
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI--QLAA 62
LF + GP+ A + YDRS RS G A ++Y+ + A++A +Y+G G+ + I ++ A
Sbjct: 99 LFEQIGPVAKAYIKYDRSDRSTGRAVVVYDNPNHALQAKNEYDGAKAKGQVISITQEMRA 158
Query: 63 D---VSVLENTVPR----PVARGGRGGASGGYRNGTAPTYRPRGGLK 102
D V ++ + R +GG A+G + + P R G K
Sbjct: 159 DRPKVQTHKSLLSRFDLGSRLKGGEEEAAGSFVDRLGPVRHAREGKK 205
>gi|390599056|gb|EIN08453.1| hypothetical protein PUNSTDRAFT_144039 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 227
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR-PMQIQ 59
I ELF + GPLK + Y+ G S G A + ++R DA KA +YNG +DG+ P++I+
Sbjct: 64 IRELFINTVGPLKDVLIVYNSHGVSNGMAVVTFQRHGDAGKARDKYNGKIVDGKNPIKIE 123
Query: 60 LAAD 63
+ D
Sbjct: 124 IIVD 127
>gi|402697295|gb|AFQ90835.1| polyA-binding protein cytoplasmic 1, partial [Sternotherus minor]
Length = 175
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF FGP S K+ D SG+S G + +ER DA KA+ + NG +G+ + + A
Sbjct: 104 LKELFGXFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRA 163
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F FG +++ ++ D SG S G A + + D +AM+Q NG L GRPM++
Sbjct: 384 MLGRIFDPFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRPMKV-- 441
Query: 61 AADVSVLENTVPRPV 75
SV + +P PV
Sbjct: 442 ---CSVEGDEMPPPV 453
>gi|114691683|ref|XP_001135255.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J-like isoform 4 [Pan troglodytes]
gi|332870660|ref|XP_003319033.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J isoform 1 [Pan troglodytes]
Length = 497
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQ 82
Query: 61 AADVSVLENTVPRPVA 76
A S + RP A
Sbjct: 83 AKKPSFQSDGRRRPPA 98
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYV 263
>gi|164663243|ref|XP_001732743.1| hypothetical protein MGL_0518 [Malassezia globosa CBS 7966]
gi|159106646|gb|EDP45529.1| hypothetical protein MGL_0518 [Malassezia globosa CBS 7966]
Length = 145
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELFS GPL+ + Y +G+S G + ++R DA +A QYN +DG RP++I+
Sbjct: 8 VKELFSTTIGPLRRVLMSYRANGQSTGVVTVEFQRAEDASRAYAQYNNRLIDGKRPLKIE 67
Query: 60 LAAD 63
+ D
Sbjct: 68 VVVD 71
>gi|149924767|ref|ZP_01913111.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
gi|149814351|gb|EDM73949.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
Length = 155
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF++ G + A + DR +G S G + R DA KAMK+ G LDGR ++I L
Sbjct: 92 LRELFAKVGAVVDAMIVTDRDTGDSRGFGFVTMANRKDATKAMKELGGTELDGRSIRIDL 151
Query: 61 AAD 63
A +
Sbjct: 152 ATE 154
>gi|41055184|ref|NP_957491.1| transformer-2 protein homolog beta [Danio rerio]
gi|29124601|gb|AAH49051.1| Splicing factor, arginine/serine-rich, 10 [Danio rerio]
Length = 278
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GPL + YD+ S RS G A + +E R D+ +A ++ NG+ LDGR +++ +
Sbjct: 141 EVFSKYGPLSDVCIVYDQQSRRSRGFALVYFENREDSKEAKERANGMELDGRRIRVDYS 199
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ + +
Sbjct: 207 LKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFV 263
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFSE G + AK+ YDR SGRS G + Y + A+ NG+ LDGR +++
Sbjct: 224 LKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSA 283
Query: 61 AAD 63
A +
Sbjct: 284 AEE 286
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 5 LFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
LF G ++ ++ YD+ SGRS G + + + A +Q+NG +DGR +++
Sbjct: 107 LFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRV----- 161
Query: 64 VSVLENTVPRPVAR------GGRGGAS--GGYRNGTAPTYRPRGG 100
N P P R GGRGG S GG R+G + RGG
Sbjct: 162 -----NAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGG 201
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 252 LKDLFGKFGPALSVKVVTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYV 308
>gi|336375402|gb|EGO03738.1| hypothetical protein SERLA73DRAFT_175356 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388461|gb|EGO29605.1| hypothetical protein SERLADRAFT_457577 [Serpula lacrymans var.
lacrymans S7.9]
Length = 240
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +F + G L + + YDRSGRS G A + +E ++AI+A KQ++G+ G+ M+I
Sbjct: 59 LVSIFGQIGTLVREPLIRYDRSGRSSGVAYVSFETSTEAIRAKKQFHGMAAKGQSMEIAF 118
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ +
Sbjct: 207 LKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 261
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|71004962|ref|XP_757147.1| hypothetical protein UM01000.1 [Ustilago maydis 521]
gi|46096777|gb|EAK82010.1| hypothetical protein UM01000.1 [Ustilago maydis 521]
Length = 356
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ LF GP+ A + YDRS RS G A ++Y+ + A++A Q++G G+ + I
Sbjct: 167 LKNLFESIGPVTKAYIRYDRSDRSTGVAVVVYDNPNHALQAKAQFDGAKAKGQVISI 223
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D+SG+S G + +E+ DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYV 263
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
ELF++FGP+ SA L D G+ G + YE+ DA+KA++ N L+G + +
Sbjct: 237 ELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 291
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+Y+ FS FG + S+K+ D +G+S G + +E A +A+ NG+ L+G+ + +
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV 198
>gi|302676373|ref|XP_003027870.1| hypothetical protein SCHCODRAFT_83413 [Schizophyllum commune H4-8]
gi|300101557|gb|EFI92967.1| hypothetical protein SCHCODRAFT_83413 [Schizophyllum commune H4-8]
Length = 226
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 2 IYELFSEFGPL-KSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++F + G L + ++ YDRSGRS GTA + YE DA KA ++ G+ M I+
Sbjct: 66 LSKIFGQAGTLVREPQIRYDRSGRSTGTAIITYETVDDAKKAKNLFDNKTAKGQAMNIEF 125
Query: 61 AA 62
AA
Sbjct: 126 AA 127
>gi|162605986|ref|XP_001713508.1| polyadenylate-binding protein [Guillardia theta]
gi|13794428|gb|AAK39803.1|AF165818_11 polyadenylate-binding protein [Guillardia theta]
Length = 389
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNG 48
++ LFSE+G + S+K+ YD G SLG + Y+ DAI A+ NG
Sbjct: 111 LHSLFSEYGEILSSKIKYDNEGSSLGYGFVHYKEMKDAISAINNLNG 157
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
++ FS+FG + L DR + +S G A + YE SDA A ++ NG PLDG+P++++
Sbjct: 23 VLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPSDAKDAAREMNGKPLDGKPIKVE 82
Query: 60 LAA 62
A
Sbjct: 83 QAT 85
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFS FG + S K+ D++G S G+ + + R +A +A+ + NG L G+P+ + A
Sbjct: 337 ELFSTFGKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITEMNGKMLSGKPLYVAFA 394
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+YELFS+ G + S ++ D S RSLG A + + DA +A++ N VPL+ +P+++
Sbjct: 53 LYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALEMLNFVPLNNKPIRV 110
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+++ FS FG + S K+ D G+S G + YE+ A AMK NG+ ++ +P+ +
Sbjct: 141 LHDTFSAFGAILSCKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYV 197
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
ELF++FGP+ SA L D G+ G + YE+ DA+KA++ N L+G + +
Sbjct: 237 ELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 291
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+Y+ FS FG + S+K+ D +G+S G + +E A +A+ NG+ L+G+ + +
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV 198
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E F E+G + A++ YD +GRS G + Y RS+ A+ NGV L+GR M++ L
Sbjct: 220 LVEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSL 279
Query: 61 A 61
A
Sbjct: 280 A 280
>gi|402697283|gb|AFQ90829.1| polyA-binding protein cytoplasmic 1, partial [Dibamus sp. JJF-2012]
Length = 177
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP K+ D SG+S G + +ER DA KA+ NG L+G+ + +
Sbjct: 104 LKELFGKFGPALXVKVMTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKQIYV 160
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
ELF++FGP+ SA L D G+ G + YE+ DA+KA++ N L+G + +
Sbjct: 237 ELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 291
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+Y+ FS FG + S+K+ D +G+S G + +E A +A+ NG+ L+G+ + +
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV 198
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
ELF++FGP+ SA L D G+ G + YE+ DA+KA++ N L+G + +
Sbjct: 237 ELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 291
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+Y+ FS FG + S+K+ D +G+S G + +E A +A+ NG+ L+G+ + +
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV 198
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
ELF++FGP+ SA L D G+ G + YE+ DA+KA++ N L+G + +
Sbjct: 237 ELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 291
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+Y+ FS FG + S+K+ D +G+S G + +E A +A+ NG+ L+G+ + +
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV 198
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D+SG+S G + +E+ DA KA+ + NG L+G+ + +
Sbjct: 207 LKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYV 263
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ S FG + S K+ D +G S G + +E R A +A+++ NG+PL+ R
Sbjct: 115 LYDTVSAFGNVLSCKVVCDENG-SKGYGFVHFETREAAERAIEKMNGIPLNDR 166
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 89
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ++FS +G ++ K+ +DR +G G A + Y S+A +A+ Q NG P+DGR +++
Sbjct: 20 IRQIFSVYGAIQDLKMIHDRETGNFRGFAFITYASPSEAEEAVAQMNGQPIDGRNLKVTF 79
Query: 61 AAD 63
A D
Sbjct: 80 AED 82
>gi|225711646|gb|ACO11669.1| Polymerase delta-interacting protein 3 [Caligus rogercresseyi]
Length = 367
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ELF + GPLK K+ + GTA++++ R DA+KA++ + LDG+ M+ QL
Sbjct: 311 IVELFGDVGPLKRVKVV------NPGTAEVVFVNRDDALKAVETCHNRQLDGKAMKCQL 363
>gi|403221645|dbj|BAM39777.1| uncharacterized protein TOT_020000048 [Theileria orientalis strain
Shintoku]
Length = 187
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFS G + + YD + RS GT IY+ DA KA+ ++NG ++G+ +++
Sbjct: 93 LMELFSSVGDVAKVWVDYDNTDRSKGTGGCIYKFTEDAKKAISKFNGSMIEGKAVEMYGE 152
Query: 62 ADVSVLENTVPR---PVARGGRGGASGGYRNGTAP 93
N PR PV R R G R G +P
Sbjct: 153 VYSRDRRNFRPRNRYPV-RSNRFSRGGPRRTGRSP 186
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG ++G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGK 259
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELF +FGP S K+ D G+S G + +ER DA KA+ + NG L+G+ + +
Sbjct: 207 LKELFGKFGPALSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|84995834|ref|XP_952639.1| RNA and export factor binding protein [Theileria annulata strain
Ankara]
gi|65302800|emb|CAI74907.1| RNA and export factor binding protein, putative [Theileria
annulata]
Length = 188
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELFS G + + YD + RS GT IY+ DA KA+ ++NG ++G+ +++
Sbjct: 92 LMELFSSVGDVVKVWVDYDNTDRSKGTGGCIYKFTDDAKKAISKFNGTVIEGKAVEM 148
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex
subunit rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++FSE GP+ S +L YDR +G+ G Y+ + A+ AM+ N L+GRP+++
Sbjct: 32 LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNLNAFDLNGRPLRVDN 91
Query: 61 AA 62
AA
Sbjct: 92 AA 93
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ +
Sbjct: 207 LKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 261
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRI 84
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|71029988|ref|XP_764636.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351592|gb|EAN32353.1| RNA and export factor binding protein, putative [Theileria parva]
Length = 188
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELFS G + + YD + RS GT IY+ DA KA+ ++NG ++G+ +++
Sbjct: 92 LMELFSSVGDVVKVWVDYDNTDRSKGTGGCIYKFTDDAKKAISKFNGTVIEGKAVEM 148
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG ++G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|302408078|ref|XP_003001874.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261359595|gb|EEY22023.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 555
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M++ELFS GP+ S ++ D + RSLG A + Y SD KA+++ N ++GRP +I
Sbjct: 76 MLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEELNYTVINGRPCRI 134
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ +
Sbjct: 224 LKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 278
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 43 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRI 101
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 132 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 183
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ + +
Sbjct: 224 LKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFV 280
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 43 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRI 101
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 132 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 183
>gi|323305308|gb|EGA59055.1| Pab1p [Saccharomyces cerevisiae FostersB]
gi|323333819|gb|EGA75210.1| Pab1p [Saccharomyces cerevisiae AWRI796]
Length = 466
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
ELF++FGP+ SA L D G+ G + YE+ DA+KA++ N L+G + +
Sbjct: 126 ELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 180
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+Y+ FS FG + S+K+ D +G+S G + +E A +A+ NG+ L+G+ + +
Sbjct: 31 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV 87
>gi|449489183|ref|XP_004176732.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 7 [Taeniopygia
guttata]
Length = 272
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+I+ELF + GP+ + K+ DR GR A + ++ ++ NG+ L GRPM+IQ
Sbjct: 25 LIFELFHQAGPVITVKIPKDRDGRPKQFAFVNFKHEESVPYGLRLLNGIXLYGRPMRIQF 84
Query: 61 AADVSVLENTVPRPVARGGRGGAS 84
+ S + ++ G G S
Sbjct: 85 RSGSSHAAQDINPSCSQLGSAGTS 108
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M++ELFS GP+ S ++ D + RSLG A + Y SD KA+++ N ++GRP +I
Sbjct: 76 MLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEELNYTVINGRPCRI 134
>gi|449481723|ref|XP_002196467.2| PREDICTED: polymerase delta-interacting protein 3 [Taeniopygia
guttata]
Length = 416
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 292 IVELFCVCGALKRARLVHP------GVAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 345
Query: 62 ADVSVLENTVP 72
+ +V+ + P
Sbjct: 346 MNGNVITSDQP 356
>gi|358396008|gb|EHK45395.1| hypothetical protein TRIATDRAFT_274882 [Trichoderma atroviride IMI
206040]
Length = 255
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1 MIYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
I E F + GP+K +L Y + +S G A++ + + A +A++ NG+ +DGRP++I+
Sbjct: 85 QIKEYFVQSVGPIKRVELSYGPNSQSRGIANVTFSKPEGASRALQSLNGLLVDGRPIKIE 144
Query: 60 LAADVSVLENTVP 72
+ + + +P
Sbjct: 145 IVVGAAQADKVIP 157
>gi|392589278|gb|EIW78609.1| hypothetical protein CONPUDRAFT_108567 [Coniophora puteana
RWD-64-598 SS2]
Length = 239
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 2 IYELFSEFGPLKSA-KLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ +F + G L ++ YDRSGRS G A + YE +A +A Q+ G+ G+PM+I
Sbjct: 58 LMSIFGQIGTLVCEPQIRYDRSGRSSGVAIVTYETIGEATRAKNQFQGLLAKGQPMEIAS 117
Query: 61 AADV 64
D
Sbjct: 118 HVDA 121
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG ++G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGK 259
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG ++G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGK 259
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFS FG + S K+ D++G S G+ + + R +A +A+ + NG + G+P+ + A
Sbjct: 340 ELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFA 397
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
++E FS FG + S K+ D G+S G + YE+ A A+K NG+ ++ +P+ +
Sbjct: 144 LHETFSSFGTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFV 200
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+YELFS+ G + S ++ D S RSLG A + + DA +A++ N PL+ +P+++
Sbjct: 56 LYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEVLNFAPLNNKPIRV 113
>gi|444720785|gb|ELW61557.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 232
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+LF +FGP K+ D SG+S G + +ER DA KA+ + NG L+G+ + I
Sbjct: 164 DLFGKFGPALRVKVMTDESGKSKGFGFVSFERHEDAQKAVNEMNGKELNGKQIYI 218
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+ + NG + G+ +
Sbjct: 108 LKELFSQFGKTLSVKVMRDSSGKSRGFGFVSYEKHEDANKAVDEMNGKEMSGKAI 162
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
FS FG + SAK+ + GRS G + + R +A KA+ + NG + +P+ + LA
Sbjct: 215 FSPFGSITSAKVMLE-DGRSKGFGFVCFPSREEATKAVTEMNGRIVGSKPLYVALA 269
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 16 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGLLLNDR 67
>gi|71019603|ref|XP_760032.1| hypothetical protein UM03885.1 [Ustilago maydis 521]
gi|46099825|gb|EAK85058.1| hypothetical protein UM03885.1 [Ustilago maydis 521]
Length = 307
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQ 59
+ ELF + GPL+ + Y +G+S G + ++R DA +A QYN +DG +P++++
Sbjct: 166 VKELFATTIGPLRKVAMSYRATGQSTGVCTVEFQRADDAGRAYTQYNNRLIDGKKPLKVE 225
Query: 60 LAADVS 65
+ D S
Sbjct: 226 VVVDPS 231
>gi|396462506|ref|XP_003835864.1| hypothetical protein LEMA_P052050.1 [Leptosphaeria maculans JN3]
gi|312212416|emb|CBX92499.1| hypothetical protein LEMA_P052050.1 [Leptosphaeria maculans JN3]
Length = 254
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVSVLENTVPRP 74
L Y +GRSLG+A +I+ + A KA +GV +DGRP+++++ L +P
Sbjct: 104 LQYGPNGRSLGSATIIFNKHEQASKATAALDGVKIDGRPVRVEMLVSADKLPAATSKP 161
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG ++G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGK 259
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++F FGPL LH D +GRS G + Y+ +DA +A+++ NG L GR +++ L
Sbjct: 240 VRQIFEPFGPLDFVNLHKDPETGRSKGFGFIQYKNANDAKQALEKMNGFELAGRNLKVGL 299
Query: 61 AADVS 65
++ S
Sbjct: 300 VSEKS 304
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFS FG + S K+ D++G S G+ + + R +A +A+ + NG + G+P+ + A
Sbjct: 422 ELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFA 479
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+YELFS+ G + S ++ D S RSLG A + Y DA +AM+ N PL+ +P+++
Sbjct: 138 LYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEALNFAPLNNKPIRV 195
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+++ FS FG + S K+ D G+S G + YE+ A AMK NG+ ++ +P+ +
Sbjct: 226 LHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYV 282
>gi|115399450|ref|XP_001215314.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192197|gb|EAU33897.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 821
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS-VLENTVPRPV 75
L Y+++G S G A +++ + A KA K NG+ +DGRPM+I++ D S E P+P+
Sbjct: 2 LTYNQNGTSRGIASIVFSKPDTAAKAAKDLNGLLVDGRPMKIEVVVDASHAPEVPAPKPL 61
Query: 76 A 76
Sbjct: 62 G 62
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFS FG + S K+ D++G S G+ + + R +A +A+ + NG + G+P+ + A
Sbjct: 422 ELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFA 479
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+YELFS+ G + S ++ D S RSLG A + Y DA +AM+ N PL+ +P+++
Sbjct: 138 LYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEALNFAPLNNKPIRV 195
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+++ FS FG + S K+ D G+S G + YE+ A AMK NG+ ++ +P+ +
Sbjct: 226 LHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYV 282
>gi|159479638|ref|XP_001697897.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158273995|gb|EDO99780.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 394
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
F E+GP+K +L D++G+S G A + YE ++D +A K +G ++GR + + + +
Sbjct: 171 FEEYGPVKRVRLVMDKNGKSRGYAFVEYEHKADMKEAYKAADGKKIEGRRVLVDVERGRT 230
Query: 66 VLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGGL 101
V EN PR + GG GA G R AP + G L
Sbjct: 231 V-ENWKPRRL--GGGLGAPG--REPKAPKRQKPGAL 261
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ + +
Sbjct: 198 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFV 254
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 17 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIM 76
Query: 60 LA 61
+
Sbjct: 77 WS 78
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 106 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 157
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ +
Sbjct: 209 ELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI 261
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIM 85
Query: 60 LA 61
+
Sbjct: 86 WS 87
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDR 166
>gi|440794582|gb|ELR15742.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 257
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 10 GPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
G L + +DRSGRS GTA ++E R A +A++ ++G L+G+ + + + A+
Sbjct: 160 GDLLKVHIAFDRSGRSEGTAKAVFESREAANRAIRDFDGAELEGQVLSLAIVAN 213
>gi|148696181|gb|EDL28128.1| myelin basic protein expression factor 2, repressor, isoform CRA_c
[Mus musculus]
Length = 439
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 105 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 163
>gi|536926|gb|AAA78270.1| myelin gene expression factor, partial [Mus musculus]
Length = 435
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 101 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 159
>gi|326926672|ref|XP_003209522.1| PREDICTED: myelin expression factor 2-like [Meleagris gallopavo]
Length = 628
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL- 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 279 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMD 338
Query: 61 -----AADVSVLENTVPR 73
D V+++ P+
Sbjct: 339 DKSVPHEDFRVVDSKAPQ 356
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+YE+FS+ GP+ S ++ D + RSLG A + Y DA +A++ N P++G+P++I
Sbjct: 40 LYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRALELLNFTPVNGKPIRIMF 99
Query: 61 A 61
+
Sbjct: 100 S 100
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELF+E+G + S K+ D G+S G+ + + +A +A+ + N + +P+ + LA
Sbjct: 324 ELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMNTKMVGSKPLYVALA 381
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+++ FS FG + S K+ D SG+S G + +E+ A A+++ NG+ L+ +
Sbjct: 128 LHDTFSAFGGILSCKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDK 180
>gi|149023163|gb|EDL80057.1| rCG26626, isoform CRA_b [Rattus norvegicus]
Length = 423
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 89 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 147
>gi|148696179|gb|EDL28126.1| myelin basic protein expression factor 2, repressor, isoform CRA_a
[Mus musculus]
Length = 456
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 105 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 163
>gi|432881665|ref|XP_004073891.1| PREDICTED: transformer-2 protein homolog alpha-like [Oryzias
latipes]
Length = 268
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKL-HYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS +G L + H R+GRS G A + +ER DA +A++ NG+ +DGR +++ +
Sbjct: 127 EVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYS 185
>gi|385304605|gb|EIF48617.1| rna-binding rna annealing mrna export [Dekkera bruxellensis
AWRI1499]
Length = 275
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG--RPMQI 58
+ E F S+ G + L Y+ G+S G A +I++ S A KA+ +YN P+DG + +++
Sbjct: 104 VKEFFQSQIGGVSHVSLSYNERGQSTGVATVIFKHASTARKAVAKYNNAPIDGKRKTLKL 163
Query: 59 QLAAD 63
+L D
Sbjct: 164 ELVVD 168
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ +
Sbjct: 209 ELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI 261
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDR 166
>gi|255566167|ref|XP_002524071.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223536639|gb|EEF38281.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 107
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 14 SAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
SAK+ Y+R +GRS G + +E DA A+ NGV ++GRP+++ LAAD
Sbjct: 30 SAKVIYERDTGRSRGFGFVSFESAEDAEAALNSMNGVEVEGRPLRLNLAAD 80
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++FSE GP+ S +L YDR +G+ G Y+ + A+ AM+ N L+GRP+++
Sbjct: 32 LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNLNAFDLNGRPLRVDN 91
Query: 61 AA 62
AA
Sbjct: 92 AA 93
>gi|149023162|gb|EDL80056.1| rCG26626, isoform CRA_a [Rattus norvegicus]
Length = 440
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 89 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 147
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFS FG + S K+ D++G S G+ + + R +A +A+ + NG + G+P+ + A
Sbjct: 223 ELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFA 280
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+++ FS FG + S K+ D G+S G + YE+ A AMK NG+ ++ +P+ +
Sbjct: 27 LHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYV 83
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+++LF+ GP+ S ++ D + RSLG A + + DA AM+ N PL+G+ +++ +
Sbjct: 22 LFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAMEHLNFTPLNGKSIRVMFS 81
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFSEFG + S K+ + +GRS G + + +A +A+ + NG + RP+ + +A
Sbjct: 306 ELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHEMNGKMIGRRPLYVAVA 363
>gi|366995805|ref|XP_003677666.1| hypothetical protein NCAS_0G04280 [Naumovozyma castellii CBS 4309]
gi|342303535|emb|CCC71315.1| hypothetical protein NCAS_0G04280 [Naumovozyma castellii CBS 4309]
Length = 435
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
++F E G + A + DR+GRS G +I+ R D +A+ +YN +DGR + ++
Sbjct: 239 DMFKECGDVMRADVELDRAGRSRGFGTVIFRTRDDMERAIDRYNRFEVDGRTLDVR 294
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+Y+LF G +++A+L YDR+G + G A + + + DA +++ N G ++I A
Sbjct: 373 LYDLFESIGKVRNAELKYDRNGETTGVAIVEFISQDDADVCIERLNKYNYGGCDLEISYA 432
Query: 62 ADV 64
V
Sbjct: 433 KRV 435
>gi|198421867|ref|XP_002121273.1| PREDICTED: similar to squamous cell carcinoma antigen recognised by
T cells 3 [Ciona intestinalis]
Length = 930
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ++FSE G +KSA++ + G+S G A + YE SDA +A+ + + +DG +++ ++
Sbjct: 790 LQKVFSEHGVVKSARIVVTKGGKSKGIAFIEYENESDAAQAVMKMDETEMDGFTIKVAIS 849
Query: 62 ADVSVLENTVPRPVARGGRGGAS-GGYRNGTAPTYRPRGGLKKTL 105
P P R G S G GT R +G + TL
Sbjct: 850 N---------PPPRGRSSTMGKSLGQVERGTTVGSRGKGKSQVTL 885
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ +
Sbjct: 209 ELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI 261
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDR 166
>gi|340515668|gb|EGR45921.1| predicted protein [Trichoderma reesei QM6a]
Length = 261
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 IYELFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I E F + GP+K +L Y + +S G A++ + + A +A++ NG+ +DGRP++I++
Sbjct: 86 IKEYFVQSVGPIKKVELSYGPNSQSRGIANVTFSKPDGASRALQTLNGLLVDGRPIKIEI 145
Query: 61 AADVSVLENTVP 72
+ + +P
Sbjct: 146 IVGAAQADKVIP 157
>gi|393905058|gb|EFO21821.2| RNA binding protein [Loa loa]
Length = 254
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF E+ + SA ++YD G S+GTAD++ +R + A + + +GV LDG M +
Sbjct: 114 LNELFEEYSII-SANVNYDEMGESVGTADVVTDRVT-AREIVANLDGVALDGEVMSFHMI 171
Query: 62 ADVSV 66
D ++
Sbjct: 172 DDQTI 176
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+ +
Sbjct: 207 LRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI 261
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDR 166
>gi|19548762|gb|AAL90778.1| myelin gene expression factor [Mus musculus]
gi|19548764|gb|AAL90779.1| myelin gene expression factor [Mus musculus]
gi|74226274|dbj|BAE25318.1| unnamed protein product [Mus musculus]
Length = 530
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 196 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 254
>gi|348519914|ref|XP_003447474.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 279
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++FS++GPL+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++
Sbjct: 133 LRDVFSKYGPLEDVCIVYDQQSRRSRGFAFVYFENTDDAKEAKERANGMELDGRRIRVDF 192
Query: 61 A 61
+
Sbjct: 193 S 193
>gi|330689292|pdb|2RRA|A Chain A, Solution Structure Of Rna Binding Domain In Human Tra2
Beta Protein In Complex With Rna (Gaagaa)
Length = 99
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 34 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 92
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+ E+F FG L +L + +G+S G + + A KAM+Q NG L GRPM++
Sbjct: 284 MLKEIFEPFGRLDRVELIKEDTGKSKGYGFVTFHEADAAKKAMEQLNGFELAGRPMKV 341
>gi|354488283|ref|XP_003506300.1| PREDICTED: myelin expression factor 2 [Cricetulus griseus]
Length = 557
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 206 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 264
>gi|149023164|gb|EDL80058.1| rCG26626, isoform CRA_c [Rattus norvegicus]
Length = 399
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 89 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 147
>gi|244790091|ref|NP_034982.2| myelin expression factor 2 isoform 2 [Mus musculus]
Length = 574
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 240 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 298
>gi|148696180|gb|EDL28127.1| myelin basic protein expression factor 2, repressor, isoform CRA_b
[Mus musculus]
Length = 415
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 105 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 163
>gi|244790087|ref|NP_001155889.1| myelin expression factor 2 isoform 1 [Mus musculus]
gi|62900726|sp|Q8C854.1|MYEF2_MOUSE RecName: Full=Myelin expression factor 2; Short=MEF-2; Short=MyEF-2
gi|26339308|dbj|BAC33325.1| unnamed protein product [Mus musculus]
Length = 591
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 240 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 298
>gi|345313298|ref|XP_001514404.2| PREDICTED: transformer-2 protein homolog beta-like [Ornithorhynchus
anatinus]
Length = 478
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 238 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 296
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 220 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 272
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 128 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 179
>gi|242824516|ref|XP_002488274.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
gi|218713195|gb|EED12620.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
Length = 455
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++ +FS FGP+ S ++ D R+G SL A + +E + D +A + GV +D + +
Sbjct: 264 LHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMEGVLIDDHRIHVDF 323
Query: 61 AADVSVLENTVPRPVARGGRGGASGG 86
+ VS L +T + + +GG GG
Sbjct: 324 SQSVSKLSDTWRQATVQKRQGGGFGG 349
>gi|61098222|ref|NP_001012786.1| myelin expression factor 2 [Gallus gallus]
gi|53136664|emb|CAG32661.1| hypothetical protein RCJMB04_32c9 [Gallus gallus]
Length = 616
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 267 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 325
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
LF +FGP S K+ D SG S G + +ER DA KA+++ NG L+G+ + +
Sbjct: 279 LFGKFGPALSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYV 332
>gi|325092528|gb|EGC45838.1| peptidyl-prolyl cis-trans isomerase [Ajellomyces capsulatus H88]
Length = 392
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++ +FS FGP+ S ++ D R+G SL A + +E + D +A + GV +D + +
Sbjct: 216 LHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDF 275
Query: 61 AADVSVLENTV------PRPVARGGRGGASG-----GYRNGTAP 93
+ VS L ++ R +GG GG SG YR AP
Sbjct: 276 SQSVSKLSDSWRNATNSKRASQQGGFGGISGLEKRRQYRASEAP 319
>gi|396499673|ref|XP_003845532.1| hypothetical protein LEMA_P008400.1 [Leptosphaeria maculans JN3]
gi|312222113|emb|CBY02053.1| hypothetical protein LEMA_P008400.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPM 56
+ ELF+ G ++ A++ Y+ +GRS GT + +E+ +DA A+ ++ G GRP+
Sbjct: 404 LIELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKEADAETAISKFTGYQYGGRPL 458
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|225562593|gb|EEH10872.1| peptidyl-prolyl cis-trans isomerase-like protein 4 [Ajellomyces
capsulatus G186AR]
Length = 392
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++ +FS FGP+ S ++ D R+G SL A + +E + D +A + GV +D + +
Sbjct: 216 LHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDF 275
Query: 61 AADVSVLENTV------PRPVARGGRGGASG-----GYRNGTAP 93
+ VS L ++ R +GG GG SG YR AP
Sbjct: 276 SQSVSKLSDSWRNATNSKRASQQGGFGGISGLEKRRQYRASEAP 319
>gi|209882353|ref|XP_002142613.1| RNA recognition domain-containing protein [Cryptosporidium muris
RN66]
gi|209558219|gb|EEA08264.1| RNA recognition domain-containing protein [Cryptosporidium muris
RN66]
Length = 199
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++FSE GPL S ++ Y GRS G A ++++ S A A+++ N +DGR + ++L
Sbjct: 139 LAKVFSEIGPLDSCEVFYFDDGRSRGIATVVFKDLSHAQLAVEKLNDREVDGREILVRL 197
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 182 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 234
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 1 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 59
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 90 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 141
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|326327708|pdb|2KXN|B Chain B, Nmr Structure Of Human Tra2beta1 Rrm In Complex With
Aagaac Rna
Length = 129
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 65 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 123
>gi|432095750|gb|ELK26797.1| Myelin expression factor 2 [Myotis davidii]
Length = 490
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 139 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 197
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|310794536|gb|EFQ29997.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 257
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1 MIYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
I E F + GP+K ++ Y + S G A++ + A KA ++ NG+ +D RP++I+
Sbjct: 84 QIKEYFVTSVGPIKRVEISYGPNSVSRGIANITFREPDGASKAFQKLNGLLVDNRPIKIE 143
Query: 60 LAADVSVLENTVP 72
+ S N +P
Sbjct: 144 IVVGASQAANVIP 156
>gi|158533978|ref|NP_001013223.2| myelin expression factor 2 [Rattus norvegicus]
Length = 591
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 240 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 298
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|244790095|ref|NP_001155890.1| myelin expression factor 2 isoform 3 [Mus musculus]
Length = 550
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 240 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 298
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|342183555|emb|CCC93035.1| poly(A)-binding protein 1 [Trypanosoma congolense IL3000]
Length = 557
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+FS+FG L + L D G S G A + YE+ A++A+++ NGV +D + ++
Sbjct: 112 LKEMFSKFGRLTAIGLATDEKGESRGYARISYEKEESAVEAVRELNGVSIDDCSITVE 169
>gi|291403062|ref|XP_002717899.1| PREDICTED: myelin expression factor 2 isoform 2 [Oryctolagus
cuniculus]
Length = 600
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|344251989|gb|EGW08093.1| Myelin expression factor 2 [Cricetulus griseus]
Length = 359
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 170 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 228
>gi|449471540|ref|XP_004176973.1| PREDICTED: LOW QUALITY PROTEIN: myelin expression factor 2
[Taeniopygia guttata]
Length = 571
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 222 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 280
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+Y+LFS+ P+ S ++ D+ + SLG + Y DA AM+ N VPL+G+P++I
Sbjct: 41 LYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAMENLNYVPLNGKPIRIMF 100
Query: 61 A 61
+
Sbjct: 101 S 101
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELFSEFG + S K+ D GRS G + + +A KA+ + NG + +P+ + +A
Sbjct: 322 ELFSEFGTITSCKVMSDARGRSKGVGFVAFTTPEEASKAIDEMNGKIIGQKPVYVSVA 379
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 229 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGK 281
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 48 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 106
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 137 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 188
>gi|330689294|pdb|2RRB|A Chain A, Refinement Of Rna Binding Domain In Human Tra2 Beta
Protein
Length = 96
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 31 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 89
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S + D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
>gi|157871121|ref|XP_001684110.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127178|emb|CAJ05074.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 330
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADVS 65
F +GPL+S K+ DRSGR +G+A Y +DA A+ +GV ++G + ++ A +
Sbjct: 53 FEVYGPLESYKMFTDRSGRFIGSALCTYRNPADASMAVYCMDGVEVEGSTLHVEPAKEHG 112
Query: 66 VL 67
V+
Sbjct: 113 VV 114
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|395746685|ref|XP_002825460.2| PREDICTED: myelin expression factor 2 isoform 1 [Pongo abelii]
Length = 547
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 196 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 254
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|395822133|ref|XP_003784378.1| PREDICTED: myelin expression factor 2 isoform 1 [Otolemur
garnettii]
Length = 547
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 196 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 254
>gi|380490600|emb|CCF35903.1| RNA recognition domain-containing protein containing protein
[Colletotrichum higginsianum]
Length = 291
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1 MIYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
I E F + GP+K ++ Y + S G A++ + A KA ++ NG+ +D RP++I+
Sbjct: 86 QIKEYFITSVGPIKRVEISYGPNSVSRGIANITFREPDGASKAFQKLNGLLVDNRPIKIE 145
Query: 60 LAADVSVLENTVP 72
+ S N +P
Sbjct: 146 IVVGASQAANVIP 158
>gi|355692695|gb|EHH27298.1| Myelin expression factor 2, partial [Macaca mulatta]
Length = 512
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 161 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 219
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|426234173|ref|XP_004011074.1| PREDICTED: myelin expression factor 2 [Ovis aries]
Length = 588
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 237 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 295
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|390468637|ref|XP_002753479.2| PREDICTED: myelin expression factor 2 isoform 1 [Callithrix
jacchus]
Length = 547
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 196 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 254
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|291403066|ref|XP_002717901.1| PREDICTED: myelin expression factor 2 isoform 4 [Oryctolagus
cuniculus]
Length = 583
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|119597745|gb|EAW77339.1| myelin expression factor 2, isoform CRA_c [Homo sapiens]
gi|119597746|gb|EAW77340.1| myelin expression factor 2, isoform CRA_c [Homo sapiens]
gi|119597748|gb|EAW77342.1| myelin expression factor 2, isoform CRA_c [Homo sapiens]
Length = 440
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 89 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 147
>gi|37360336|dbj|BAC98146.1| mKIAA1341 protein [Mus musculus]
Length = 506
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 258 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 316
>gi|355754329|gb|EHH58294.1| Myelin expression factor 2, partial [Macaca fascicularis]
Length = 549
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 198 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 256
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELFS++G + A++ YDR SGRS G + Y S+ A+ +G DGR +++ L
Sbjct: 123 LQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDSLDGAEFDGRELRVNL 182
Query: 61 AAD 63
A +
Sbjct: 183 AGN 185
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
I ++F FG L+ LH D +GRS G A + Y+R DA AM+Q G L GR +++
Sbjct: 198 IKQVFEPFGELEFVDLHRDPTTGRSKGYAFVQYKRAEDARMAMEQMEGFELAGRQLKVNT 257
Query: 61 AAD 63
D
Sbjct: 258 VHD 260
>gi|119597747|gb|EAW77341.1| myelin expression factor 2, isoform CRA_d [Homo sapiens]
Length = 416
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 89 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 147
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELF+EFG + S K+ D SG S G+ + + S+A + + + NG + G+P+ + LA
Sbjct: 346 ELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALA 403
>gi|344297020|ref|XP_003420198.1| PREDICTED: myelin expression factor 2-like [Loxodonta africana]
Length = 599
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 248 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 306
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELF+EFG + S K+ D SG S G+ + + S+A + + + NG + G+P+ + LA
Sbjct: 341 ELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALA 398
>gi|449272105|gb|EMC82193.1| Myelin expression factor 2, partial [Columba livia]
Length = 553
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 202 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 260
>gi|281354335|gb|EFB29919.1| hypothetical protein PANDA_005929 [Ailuropoda melanoleuca]
Length = 546
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 198 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 256
>gi|410898649|ref|XP_003962810.1| PREDICTED: transformer-2 protein homolog beta-like [Takifugu
rubripes]
Length = 277
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GPL + YD+ S RS G A + +E D+ +A + NG+ LDGR +++ +
Sbjct: 132 EVFSKYGPLADVNIVYDQQSRRSRGFAFVYFETSEDSKEAKEHANGMELDGRRIRVDFS 190
>gi|254570393|ref|XP_002492306.1| Nuclear protein that binds to RNA and to Mex67p, required for
export of poly(A)+ mRNA from the nucle [Komagataella
pastoris GS115]
gi|238032104|emb|CAY70026.1| Nuclear protein that binds to RNA and to Mex67p, required for
export of poly(A)+ mRNA from the nucle [Komagataella
pastoris GS115]
gi|328353686|emb|CCA40084.1| Polyadenylate-binding protein 2 [Komagataella pastoris CBS 7435]
Length = 229
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG 53
+ E F S+ G +KS L Y+ G S G A +++ + A A+K+YNG P+DG
Sbjct: 83 VKEFFQSQVGGVKSIALSYNEKGLSKGIATVVFRDNTHATTAVKKYNGAPIDG 135
>gi|342889186|gb|EGU88353.1| hypothetical protein FOXB_01152 [Fusarium oxysporum Fo5176]
Length = 170
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 6 FSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
F EFGP++ A + DR +GRS G + Y + DA KA+ N V DGR +++ A+D
Sbjct: 22 FEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIATMNNVEFDGRTIRVDKASD 80
>gi|338716983|ref|XP_001918232.2| PREDICTED: myelin expression factor 2-like [Equus caballus]
Length = 466
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 139 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 197
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGK 259
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|1033165|gb|AAC16917.1| Y-chromosome RNA recognition motif protein, partial [Homo sapiens]
Length = 220
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M+ +F + GP+ L DR+ +S G A + +E +DA A K NG L G+ ++++
Sbjct: 23 MLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQ 82
Query: 61 AADVSVLENTVPRP--------------VARGGRGGASG 85
A S RP ARG RGG G
Sbjct: 83 AQKPSFQSGGRRRPPASSRNRSPSGSLRSARGSRGGTRG 121
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIM 85
Query: 60 LA 61
+
Sbjct: 86 WS 87
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|301764367|ref|XP_002917607.1| PREDICTED: myelin expression factor 2-like [Ailuropoda melanoleuca]
Length = 572
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 224 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 282
>gi|291400295|ref|XP_002716399.1| PREDICTED: splicing factor, arginine/serine-rich 10 [Oryctolagus
cuniculus]
Length = 240
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 88 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 146
>gi|56269656|gb|AAH86795.1| Sfrs10 protein [Mus musculus]
Length = 229
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 136 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|426378992|ref|XP_004056191.1| PREDICTED: myelin expression factor 2 isoform 2 [Gorilla gorilla
gorilla]
Length = 600
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|283837905|ref|NP_001082402.1| splicing factor, arginine/serine-rich 10 [Xenopus laevis]
gi|83318282|gb|AAI08874.1| LOC398448 protein [Xenopus laevis]
Length = 298
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GPL + YD+ S RS G + + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 140 EVFSKYGPLSDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRLRVDFS 198
>gi|33620747|ref|NP_057216.2| myelin expression factor 2 [Homo sapiens]
gi|156230143|gb|AAI52421.1| Myelin expression factor 2 [Homo sapiens]
gi|156230747|gb|AAI52452.1| Myelin expression factor 2 [Homo sapiens]
gi|168269820|dbj|BAG10037.1| myelin expression factor 2 [synthetic construct]
gi|189442414|gb|AAI67842.1| Myelin expression factor 2 [synthetic construct]
Length = 600
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|410961329|ref|XP_003987236.1| PREDICTED: myelin expression factor 2 [Felis catus]
Length = 677
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 329 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 387
>gi|403274633|ref|XP_003929073.1| PREDICTED: myelin expression factor 2 [Saimiri boliviensis
boliviensis]
Length = 669
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 318 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 376
>gi|291403064|ref|XP_002717900.1| PREDICTED: myelin expression factor 2 isoform 3 [Oryctolagus
cuniculus]
Length = 559
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|119597743|gb|EAW77337.1| myelin expression factor 2, isoform CRA_a [Homo sapiens]
Length = 600
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 4 ELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
ELF+EFG + S K+ D SG S G+ + + S+A + + + NG + G+P+ + LA
Sbjct: 346 ELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALA 403
>gi|351708811|gb|EHB11730.1| Myelin expression factor 2 [Heterocephalus glaber]
Length = 544
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 217 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 275
>gi|328872552|gb|EGG20919.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 211
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL-- 60
+LF+E+GP+++ L+YD R+G S G A + YE+ +A +A+KQ + L G+ + +
Sbjct: 100 DLFAEYGPIRNIHLNYDRRTGFSKGYALIEYEKHQEAEEAVKQSGKIQLAGKDLTVNWTF 159
Query: 61 -----AADVSVLENTVPRPVARGGRGGASGGYRNGTAPTYRPRGG 100
+ V+ R + R GG +NG R GG
Sbjct: 160 VGGKPTSATGVIHFRTNRSINR-----ERGGDQNGGRSRRRESGG 199
>gi|386781800|ref|NP_001248185.1| myelin expression factor 2 [Macaca mulatta]
gi|380813238|gb|AFE78493.1| myelin expression factor 2 [Macaca mulatta]
gi|383408957|gb|AFH27692.1| myelin expression factor 2 [Macaca mulatta]
gi|384943592|gb|AFI35401.1| myelin expression factor 2 [Macaca mulatta]
Length = 600
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|291403060|ref|XP_002717898.1| PREDICTED: myelin expression factor 2 isoform 1 [Oryctolagus
cuniculus]
Length = 576
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|119581619|gb|EAW61215.1| hCG1658793, isoform CRA_a [Homo sapiens]
Length = 225
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M +F++ GP+ L DR+ +S G A +E +DA A K G PLDG+ ++++
Sbjct: 23 MFKAVFAKHGPISEVLLIKDRTSKSRGFAFTTFENTADAKNAAKHMIGKPLDGKAIKVEQ 82
Query: 61 AADVSV 66
A S
Sbjct: 83 AKKPSF 88
>gi|148673228|gb|EDL05175.1| mCG1028476 [Mus musculus]
Length = 506
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 240 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 298
>gi|74000608|ref|XP_544669.2| PREDICTED: myelin expression factor 2 [Canis lupus familiaris]
Length = 615
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 267 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 325
>gi|332235471|ref|XP_003266928.1| PREDICTED: myelin expression factor 2 isoform 1 [Nomascus
leucogenys]
Length = 600
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|327287218|ref|XP_003228326.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 1
[Anolis carolinensis]
Length = 418
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
I ELF G LK A+L + G A++++ ++ DAI A K+YN LDG+PM+ L
Sbjct: 295 IVELFCVCGALKRARLVHP------GMAEVVFVKKEDAITAYKKYNNRCLDGQPMKCNLH 348
Query: 62 ADVSVLENTVP 72
+ +++ + P
Sbjct: 349 MNGNIITSDQP 359
>gi|312079612|ref|XP_003142249.1| RNA binding protein [Loa loa]
Length = 260
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELF E+ + SA ++YD G S+GTAD++ +R + A + + +GV LDG M +
Sbjct: 120 LNELFEEYS-IISANVNYDEMGESVGTADVVTDRVT-AREIVANLDGVALDGEVMSFHMI 177
Query: 62 ADVSV 66
D ++
Sbjct: 178 DDQTI 182
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 18/102 (17%)
Query: 4 ELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAA 62
E F +GP+ + + YD +SGRS G A L YE DA +A + NG+ +DGR +++
Sbjct: 133 EAFGRYGPIANINVVYDHQSGRSRGFAFLSYESEEDAREAKDRTNGMEIDGRRIRV---- 188
Query: 63 DVSVLENT-VPRPVARGGRGGASGGYRNGTAPTYRPRGGLKK 103
D S+ + P P GR PTY RGG +
Sbjct: 189 DYSITKRAHTPTPGIYMGR------------PTYPKRGGYDR 218
>gi|38511616|gb|AAH60946.1| Myef2 protein [Mus musculus]
Length = 454
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 196 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 254
>gi|350578677|ref|XP_003480421.1| PREDICTED: myelin expression factor 2-like isoform 2 [Sus scrofa]
Length = 600
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|296439294|sp|Q9P2K5.3|MYEF2_HUMAN RecName: Full=Myelin expression factor 2; Short=MEF-2;
Short=MyEF-2; AltName: Full=MST156
Length = 600
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|449266970|gb|EMC77948.1| Transformer-2 like protein beta, partial [Columba livia]
Length = 156
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 80 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERANGMELDGRRIRVDFS 138
>gi|429858079|gb|ELA32912.1| protein mlo3-like protein [Colletotrichum gloeosporioides Nara gc5]
Length = 201
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADV 64
+ GP+K ++ Y + S G A++ + A KA ++ NG+ +D RP++I++
Sbjct: 38 FLTSVGPIKRVEISYGPNSVSRGIANITFRDADGASKAFQKLNGLLVDNRPIKIEIVVSA 97
Query: 65 SVLENTVP 72
S N +P
Sbjct: 98 SQAANVIP 105
>gi|348510881|ref|XP_003442973.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 290
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS++GPL + YD+ S RS G A + +E D+ +A ++ NG+ LDGR +++
Sbjct: 136 LREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENCEDSKEAKERANGMELDGRRIRVDF 195
Query: 61 A 61
+
Sbjct: 196 S 196
>gi|344282129|ref|XP_003412827.1| PREDICTED: transformer-2 protein homolog beta-like [Loxodonta
africana]
Length = 390
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++
Sbjct: 228 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 287
Query: 61 A 61
+
Sbjct: 288 S 288
>gi|332844181|ref|XP_001165031.2| PREDICTED: myelin expression factor 2 isoform 1 [Pan troglodytes]
gi|410345085|gb|JAA40635.1| myelin expression factor 2 [Pan troglodytes]
Length = 600
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|302926643|ref|XP_003054335.1| hypothetical protein NECHADRAFT_74951 [Nectria haematococca mpVI
77-13-4]
gi|256735276|gb|EEU48622.1| hypothetical protein NECHADRAFT_74951 [Nectria haematococca mpVI
77-13-4]
Length = 178
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAA 62
+ F EFGP++ A + DR +GRS G + Y + DA KA+ N V DGR +++ A+
Sbjct: 23 QKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIATMNNVEFDGRTIRVDKAS 82
Query: 63 D 63
D
Sbjct: 83 D 83
>gi|27881815|gb|AAH44695.1| LOC398448 protein, partial [Xenopus laevis]
Length = 306
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GPL + YD+ S RS G + + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 148 EVFSKYGPLSDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRLRVDFS 206
>gi|397523095|ref|XP_003831578.1| PREDICTED: myelin expression factor 2 [Pan paniscus]
Length = 848
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 497 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 555
>gi|402874227|ref|XP_003900944.1| PREDICTED: myelin expression factor 2 [Papio anubis]
Length = 600
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|395822137|ref|XP_003784380.1| PREDICTED: myelin expression factor 2 isoform 3 [Otolemur
garnettii]
Length = 584
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 250 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 308
>gi|395324948|gb|EJF57379.1| hypothetical protein DICSQDRAFT_111837 [Dichomitus squalens
LYAD-421 SS1]
Length = 235
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 5 LFSE-FGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDG-RPMQIQLAA 62
LFS+ GP++ + Y+ GRS G A + + R +DA A +YNG +DG RP++I++
Sbjct: 67 LFSKTVGPVREVLMVYNSQGRSRGMAVVAFARPTDAAVARAKYNGKIVDGRRPIKIEIVT 126
Query: 63 D 63
D
Sbjct: 127 D 127
>gi|344228406|gb|EGV60292.1| hypothetical protein CANTEDRAFT_136776 [Candida tenuis ATCC 10573]
Length = 647
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ ELFS +GP+ S+ L D G+S G + ++ +DA+KA+ + N + G+P+ +
Sbjct: 248 LKELFSAYGPITSSYLEKDLEGKSKGFGFVNFDNHNDAVKAVDELNNKEIAGQPIYV 304
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
F FG + SA++ D G+S G + + +A KA+ + N ++G+P+ + LA
Sbjct: 355 FKPFGNITSARVMVDEQGKSKGFGFVCFSSPEEATKAITEMNQRMVEGKPLYVALA 410
>gi|154795161|gb|ABS86613.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 115
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 17 LHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLD-GRPMQIQLAAD 63
L YD G+S GTA + ++R DA KA +QYN +D RPM++++ D
Sbjct: 1 LSYDNRGQSKGTAQVEFKRNDDATKAFQQYNKRLIDQNRPMKVEIILD 48
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|385281386|gb|AFI57844.1| polyA binding protein, partial [Cocos nucifera]
Length = 352
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
+ ELFSEFG + S K+ D +G S G+ + ++ DA KA+ + NG + +P+ + LA
Sbjct: 166 LRELFSEFGSITSCKVMRDPNGVSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVALA 225
>gi|341884156|gb|EGT40091.1| hypothetical protein CAEBREN_06614 [Caenorhabditis brenneri]
Length = 239
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ELF + L+SA ++++ G SLGT D+ +R DA K ++++NGV LD + M+ +
Sbjct: 90 LEELFQNY-RLQSASVNFNEHGESLGTGDISLPKR-DAEKLIREFNGVALDSKMMKFAI 146
>gi|114691962|ref|XP_001136007.1| PREDICTED: similar to RBMY1A1 protein isoform 2 [Pan troglodytes
verus]
Length = 390
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADV 64
+F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++ A
Sbjct: 27 VFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQAKKP 86
Query: 65 SVLENTVPRPVA 76
S + RP A
Sbjct: 87 SFQSDGRRRPPA 98
>gi|119597744|gb|EAW77338.1| myelin expression factor 2, isoform CRA_b [Homo sapiens]
Length = 576
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|119581620|gb|EAW61216.1| hCG1658793, isoform CRA_b [Homo sapiens]
Length = 161
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 1 MIYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
M +F++ GP+ L DR+ +S G A +E +DA A K G PLDG+ ++++
Sbjct: 23 MFKAVFAKHGPISEVLLIKDRTSKSRGFAFTTFENTADAKNAAKHMIGKPLDGKAIKVEQ 82
Query: 61 A 61
A
Sbjct: 83 A 83
>gi|441615356|ref|XP_004088291.1| PREDICTED: myelin expression factor 2 isoform 2 [Nomascus
leucogenys]
Length = 576
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 5 LFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
+F FG ++ LH D +GRS G A + Y+ DA KA++ NG+ L GR +++ + +D
Sbjct: 290 VFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQHCNGMELAGRQLKVGIVSD 349
Query: 64 VSVL 67
L
Sbjct: 350 PGTL 353
>gi|361130888|gb|EHL02625.1| putative mRNA export protein mlo3 [Glarea lozoyensis 74030]
Length = 161
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 3 YELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNG 48
++LF+ GP+ L YDR+GRS G A + YE +DA +A+++++G
Sbjct: 13 HDLFNRIGPVLKLSLVYDRAGRSEGVAYVTYESPADAKRAIREFDG 58
>gi|225680553|gb|EEH18837.1| RNA binding protein [Paracoccidioides brasiliensis Pb03]
Length = 540
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++ +FS FGP+ S ++ D R+G SL A + +E + D +A + GV +D + +
Sbjct: 362 LHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDF 421
Query: 61 AADVSVLENTV------PRPVARGGRGGAS 84
+ VS L +T R RGG GG S
Sbjct: 422 SQSVSKLSDTWRNATNSKRASQRGGFGGIS 451
>gi|426378990|ref|XP_004056190.1| PREDICTED: myelin expression factor 2 isoform 1 [Gorilla gorilla
gorilla]
Length = 576
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|345197228|ref|NP_001230808.1| transformer-2 protein homolog beta isoform 2 [Homo sapiens]
gi|410037850|ref|XP_003950298.1| PREDICTED: transformer-2 protein homolog beta [Pan troglodytes]
gi|426343201|ref|XP_004038203.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Gorilla
gorilla gorilla]
gi|441633316|ref|XP_004089753.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Nomascus
leucogenys]
gi|4377849|gb|AAD19278.1| transformer-2-beta isoform 3 [Homo sapiens]
gi|119598610|gb|EAW78204.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598611|gb|EAW78205.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598614|gb|EAW78208.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|194375203|dbj|BAG62714.1| unnamed protein product [Homo sapiens]
Length = 188
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 36 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 94
>gi|281354031|gb|EFB29615.1| hypothetical protein PANDA_003724 [Ailuropoda melanoleuca]
Length = 249
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++
Sbjct: 171 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 230
Query: 61 A 61
+
Sbjct: 231 S 231
>gi|154339297|ref|XP_001562340.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062923|emb|CAM39370.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 365
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAAD 63
F +GPL+S K+ DRSGR +G+A Y +DA A+ +GV ++G + ++ A +
Sbjct: 91 FEVYGPLESYKMFTDRSGRFIGSALCTYRNPADASMAVYCMDGVEMEGSKLHVEPAKE 148
>gi|7243063|dbj|BAA92579.1| KIAA1341 protein [Homo sapiens]
Length = 620
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 269 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 327
>gi|10434915|dbj|BAB14421.1| unnamed protein product [Homo sapiens]
Length = 576
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ ELFS+FG S K+ D SG+S G + YE+ DA KA+++ NG + G+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGK 259
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI 84
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y+ FS FG + S K+ D +G S G A + +E + A KA+++ NG+ L+ R
Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +E+ DA KA+ + NG L G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYV 263
>gi|395822135|ref|XP_003784379.1| PREDICTED: myelin expression factor 2 isoform 2 [Otolemur
garnettii]
Length = 577
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 250 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 308
>gi|338716139|ref|XP_003363400.1| PREDICTED: transformer-2 protein homolog beta-like isoform 2 [Equus
caballus]
Length = 254
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 102 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 160
>gi|297696571|ref|XP_002825461.1| PREDICTED: myelin expression factor 2 isoform 2 [Pongo abelii]
Length = 576
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|388506424|gb|AFK41278.1| unknown [Lotus japonicus]
Length = 199
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ ++F+E L SAK+ Y+R SGRS G + +E D A+K NGV + GR +++ L
Sbjct: 109 LKDVFAEQPGLVSAKVIYERDSGRSRGFGFVTFETAQDVEAALKTMNGVEVQGRELRLNL 168
Query: 61 AA 62
AA
Sbjct: 169 AA 170
>gi|350578679|ref|XP_003353420.2| PREDICTED: myelin expression factor 2-like isoform 1 [Sus scrofa]
Length = 576
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|332844183|ref|XP_510381.3| PREDICTED: myelin expression factor 2 isoform 2 [Pan troglodytes]
Length = 576
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|49258180|gb|AAH72952.1| LOC443599 protein, partial [Xenopus laevis]
Length = 304
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS++GPL + YD+ S RS G + + +E DA +A ++ NG+ LDGR +++
Sbjct: 149 LREVFSKYGPLSDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRIRVDF 208
Query: 61 A 61
+
Sbjct: 209 S 209
>gi|296213934|ref|XP_002753480.1| PREDICTED: myelin expression factor 2 isoform 2 [Callithrix
jacchus]
Length = 576
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|295661566|ref|XP_002791338.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280900|gb|EEH36466.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 442
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++ +FS FGP+ S ++ D R+G SL A + +E + D +A + GV +D + +
Sbjct: 264 LHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDF 323
Query: 61 AADVSVLENTV------PRPVARGGRGGAS 84
+ VS L +T R RGG GG S
Sbjct: 324 SQSVSKLSDTWRNATNSKRASQRGGFGGIS 353
>gi|213515188|ref|NP_001133716.1| transformer-2 protein homolog beta [Salmo salar]
gi|209155068|gb|ACI33766.1| Splicing factor, arginine/serine-rich 10 [Salmo salar]
Length = 302
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
++FS++GPL + YD+ S RS G A + +E R DA A ++ NG+ LDGR +++ +
Sbjct: 138 DVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVREDANGAKERANGMELDGRRIRVDFS 196
>gi|21758154|dbj|BAC05256.1| unnamed protein product [Homo sapiens]
Length = 252
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 100 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 158
>gi|402222291|gb|EJU02358.1| hypothetical protein DACRYDRAFT_22031 [Dacryopinax sp. DJM-731 SS1]
Length = 238
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 2 IYELF-SEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR-PMQIQ 59
I ELF + G + L ++ G+S G A + + + D KA K+YNG +D + PM+I+
Sbjct: 87 IKELFGTTVGKTREVNLAFNNKGQSKGIAHVTFTNKGDGFKAYKEYNGRLIDAKSPMKIE 146
Query: 60 LAADVSVLENTVPRPVARGGR 80
L +LE P P R
Sbjct: 147 L-----ILEPVKPAPPTLASR 162
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+ +F FG +++ +L D +GRS G L + DA KA++Q NG L GRPM++
Sbjct: 270 MLKGIFEPFGKIENIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKV 328
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
LF +FGP S K+ D SG S G + +ER DA KA+++ NG L+G+ + +
Sbjct: 210 LFGKFGPSLSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYV 263
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+YE FS GP+ S ++ D + RSLG A + +++ +DA +A++ N + G+P++I
Sbjct: 26 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALETMNFDVIKGKPVRI 84
>gi|197100753|ref|NP_001125414.1| transformer-2 protein homolog beta [Pongo abelii]
gi|55727979|emb|CAH90742.1| hypothetical protein [Pongo abelii]
Length = 288
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 136 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|148703339|gb|EDL35286.1| mCG1657 [Mus musculus]
Length = 288
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 136 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|355725838|gb|AES08680.1| transformer 2 beta-like protein [Mustela putorius furo]
Length = 297
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++
Sbjct: 192 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 251
Query: 61 A 61
+
Sbjct: 252 S 252
>gi|355705826|gb|AES02446.1| myelin expression factor 2 [Mustela putorius furo]
Length = 381
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 195 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 253
>gi|326925689|ref|XP_003209043.1| PREDICTED: transformer-2 protein homolog beta-like [Meleagris
gallopavo]
Length = 302
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 149 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERANGMELDGRRIRVDFS 207
>gi|156120817|ref|NP_001095555.1| myelin expression factor 2 [Bos taurus]
gi|151554686|gb|AAI49930.1| MYEF2 protein [Bos taurus]
gi|296483098|tpg|DAA25213.1| TPA: myelin expression factor 2 [Bos taurus]
Length = 543
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|114691840|ref|XP_001139693.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J isoform 1 [Pan troglodytes]
gi|114691960|ref|XP_001135842.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1
member F/J isoform 1 [Pan troglodytes verus]
Length = 460
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 5 LFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLAADV 64
+F + GP+ L DR+ +S G A + +E +DA A K NG LDG+ ++++ A
Sbjct: 27 VFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQAKKP 86
Query: 65 SVLENTVPRPVA 76
S + RP A
Sbjct: 87 SFQSDGRRRPPA 98
>gi|348582426|ref|XP_003476977.1| PREDICTED: transformer-2 protein homolog beta-like [Cavia
porcellus]
Length = 337
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 182 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 240
>gi|296226907|ref|XP_002759113.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Callithrix jacchus]
Length = 604
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+ +LF +FGP S K+ D SG+S G + +ER DA KA+ NG L+G+
Sbjct: 175 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDVMNGKELNGK 227
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M++E FS GP+ S ++ D + RSLG A + +++ +DA +A+ N + G+P++I
Sbjct: 26 MLFEKFSPAGPILSIRVCRDMITHRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI 84
>gi|226292809|gb|EEH48229.1| RNA binding protein [Paracoccidioides brasiliensis Pb18]
Length = 442
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 2 IYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
++ +FS FGP+ S ++ D R+G SL A + +E + D +A + GV +D + +
Sbjct: 264 LHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDF 323
Query: 61 AADVSVLENTV------PRPVARGGRGGAS 84
+ VS L +T R RGG GG S
Sbjct: 324 SQSVSKLSDTWRNATNSKRASQRGGFGGIS 353
>gi|4759098|ref|NP_004584.1| transformer-2 protein homolog beta isoform 1 [Homo sapiens]
gi|6677975|ref|NP_033212.1| transformer-2 protein homolog beta [Mus musculus]
gi|16923966|ref|NP_476460.1| transformer-2 protein homolog beta [Rattus norvegicus]
gi|77736495|ref|NP_001029948.1| transformer-2 protein homolog beta [Bos taurus]
gi|116175275|ref|NP_001070689.1| transformer-2 protein homolog beta [Sus scrofa]
gi|386780576|ref|NP_001248265.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|114590871|ref|XP_530672.2| PREDICTED: transformer-2 protein homolog beta isoform 3 [Pan
troglodytes]
gi|194222668|ref|XP_001497871.2| PREDICTED: transformer-2 protein homolog beta-like isoform 1 [Equus
caballus]
gi|296224784|ref|XP_002758193.1| PREDICTED: transformer-2 protein homolog beta [Callithrix jacchus]
gi|332215039|ref|XP_003256645.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Nomascus
leucogenys]
gi|345796409|ref|XP_535833.3| PREDICTED: transformer-2 protein homolog beta [Canis lupus
familiaris]
gi|354484188|ref|XP_003504272.1| PREDICTED: transformer-2 protein homolog beta-like [Cricetulus
griseus]
gi|395839823|ref|XP_003792775.1| PREDICTED: transformer-2 protein homolog beta [Otolemur garnettii]
gi|397470084|ref|XP_003806663.1| PREDICTED: transformer-2 protein homolog beta [Pan paniscus]
gi|402860695|ref|XP_003894758.1| PREDICTED: transformer-2 protein homolog beta [Papio anubis]
gi|403270092|ref|XP_003927029.1| PREDICTED: transformer-2 protein homolog beta-like [Saimiri
boliviensis boliviensis]
gi|410970819|ref|XP_003991874.1| PREDICTED: transformer-2 protein homolog beta [Felis catus]
gi|426217758|ref|XP_004003119.1| PREDICTED: transformer-2 protein homolog beta [Ovis aries]
gi|426343199|ref|XP_004038202.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Gorilla
gorilla gorilla]
gi|51703329|sp|P62997.1|TRA2B_RAT RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=RA301; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703330|sp|P62995.1|TRA2B_HUMAN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; Short=hTRA2-beta; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703331|sp|P62996.1|TRA2B_MOUSE RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Silica-induced gene 41
protein; Short=SIG-41; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|122143022|sp|Q3ZBT6.1|TRA2B_BOVIN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|1255683|dbj|BAA08556.1| RNA binding protein (transformer-2-like) [Rattus norvegicus]
gi|1279558|emb|CAA56518.1| SIG41 [Mus musculus]
gi|1418286|gb|AAC28242.1| htra2-beta [Homo sapiens]
gi|1553035|gb|AAB08701.1| transformer-2 beta [Homo sapiens]
gi|4377848|gb|AAD19277.1| transformer-2-beta isoform 1 [Homo sapiens]
gi|12652815|gb|AAH00160.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|12653363|gb|AAH00451.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|13543480|gb|AAH05898.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|26340312|dbj|BAC33819.1| unnamed protein product [Mus musculus]
gi|38174351|gb|AAH61177.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Mus musculus]
gi|47477836|gb|AAH70948.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|73586673|gb|AAI03114.1| Transformer 2 beta homolog (Drosophila) [Bos taurus]
gi|115371737|gb|ABI96193.1| TRA2B [Sus scrofa]
gi|119598612|gb|EAW78206.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_b [Homo sapiens]
gi|123980068|gb|ABM81863.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|148665208|gb|EDK97624.1| mCG127344, isoform CRA_a [Mus musculus]
gi|149019900|gb|EDL78048.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|157928074|gb|ABW03333.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|296491312|tpg|DAA33375.1| TPA: transformer-2 protein homolog beta [Bos taurus]
gi|307685141|dbj|BAJ20501.1| transformer 2 beta homolog [synthetic construct]
gi|344239811|gb|EGV95914.1| Transformer-2 protein-like beta [Cricetulus griseus]
gi|380815584|gb|AFE79666.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|383420761|gb|AFH33594.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|410211132|gb|JAA02785.1| transformer 2 beta homolog [Pan troglodytes]
gi|410264594|gb|JAA20263.1| transformer 2 beta homolog [Pan troglodytes]
gi|410302962|gb|JAA30081.1| transformer 2 beta homolog [Pan troglodytes]
Length = 288
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 136 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|449687377|ref|XP_002170842.2| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Hydra magnipapillata]
Length = 316
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGR 54
+Y LFS FG +KSAK+ +G+S G + YE +A KA+ NGV L +
Sbjct: 191 LYRLFSCFGKIKSAKVMTYNNGKSKGYGYVCYETNEEASKAISSMNGVQLSSK 243
>gi|389595175|ref|XP_003722810.1| poly(A)-binding protein 2 [Leishmania major strain Friedlin]
gi|323364038|emb|CBZ13044.1| poly(A)-binding protein 2 [Leishmania major strain Friedlin]
Length = 594
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+FS+FG L + L D G S G A + +ER A+ A+++ +G+ +DG+ + ++
Sbjct: 111 LKEMFSKFGRLTAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVE 168
>gi|45382747|ref|NP_990009.1| transformer-2 protein homolog beta [Gallus gallus]
gi|224059830|ref|XP_002195659.1| PREDICTED: transformer-2 protein homolog beta isoform 1
[Taeniopygia guttata]
gi|11494371|gb|AAG35783.1|AF282244_1 transformer-2 beta [Gallus gallus]
Length = 289
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 136 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERANGMELDGRRIRVDFS 194
>gi|401429856|ref|XP_003879410.1| putative poly(a) binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495660|emb|CBZ30966.1| putative poly(a) binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 594
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQ 59
+ E+FS+FG L + L D G S G A + +ER A+ A+++ +G+ +DG+ + ++
Sbjct: 111 LKEMFSKFGRLTAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVE 168
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 MIYELFSEFGPLKSAKLHYD-RSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
M+ +F FG + + +L D +GRS G + Y DA KA++Q NG L GRPM++
Sbjct: 373 MLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMKV 431
>gi|335775542|gb|AEH58607.1| transformer-2 protein-like protein beta-like protein [Equus
caballus]
Length = 275
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 123 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 181
>gi|334324956|ref|XP_001377181.2| PREDICTED: transformer-2 protein homolog beta-like [Monodelphis
domestica]
Length = 299
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 147 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 205
>gi|189055016|dbj|BAG38000.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 136 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|417402927|gb|JAA48293.1| Putative rna-binding protein hnrnp-m [Desmodus rotundus]
Length = 576
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS G +K A + D+ G+S G + +E+ +A++A+ +NG L RPM +++
Sbjct: 249 LKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307
>gi|90078208|dbj|BAE88784.1| unnamed protein product [Macaca fascicularis]
Length = 288
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 136 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +E+ DA KA+ + NG L G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYV 263
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 6 FSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
FS FG + SAK+ + GRS G + + +A KA+ + NG+ + +P+ + LA
Sbjct: 314 FSPFGTITSAKVMME-GGRSRGFGFVCFSSPEEATKAVTEMNGIIVATKPLYVSLA 368
>gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GPL + YD+ S RS G A + +E D+ +A + NG+ LDGR +++ +
Sbjct: 98 EVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEHANGMELDGRRIRVDYS 156
>gi|148665209|gb|EDK97625.1| mCG127344, isoform CRA_b [Mus musculus]
gi|417409256|gb|JAA51145.1| Putative ataxin 2-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 276
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 124 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 182
>gi|51476162|emb|CAH18071.1| hypothetical protein [Homo sapiens]
Length = 276
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 ELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQLA 61
E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++ +
Sbjct: 124 EVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 182
>gi|301759721|ref|XP_002915754.1| PREDICTED: hypothetical protein LOC100477296 [Ailuropoda
melanoleuca]
Length = 440
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 IYELFSEFGPLKSAKLHYDR-SGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQIQL 60
+ E+FS++GP+ + YD+ S RS G A + +E DA +A ++ NG+ LDGR +++
Sbjct: 286 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 345
Query: 61 A 61
+
Sbjct: 346 S 346
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 2 IYELFSEFGPLKSAKLHYDRSGRSLGTADLIYERRSDAIKAMKQYNGVPLDGRPMQI 58
+ +LF +FGP S K+ D SG+S G + +E+ DA KA+ + NG L G+ + +
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYV 263
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,822,464,696
Number of Sequences: 23463169
Number of extensions: 75215285
Number of successful extensions: 302087
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2462
Number of HSP's successfully gapped in prelim test: 3855
Number of HSP's that attempted gapping in prelim test: 292144
Number of HSP's gapped (non-prelim): 11812
length of query: 105
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 32
effective length of database: 6,351,416,734
effective search space: 203245335488
effective search space used: 203245335488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)