Your job contains 1 sequence.
>psy1929
MVRFQRHSSPLSRVGSYISVKETHQIAEAQLEKNARLRDAFGISEYFVEGSSLDPTRREK
EALAQAAAKKYALVRTPSPELGDRSKTKKRKRKDR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1929
(95 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035253 - symbol:CG7971 species:7227 "Drosophila m... 148 4.4e-09 2
UNIPROTKB|I3LCW3 - symbol:SRRM2 "Uncharacterized protein"... 127 2.0e-06 1
UNIPROTKB|Q9UQ35 - symbol:SRRM2 "Serine/arginine repetiti... 127 2.0e-06 1
UNIPROTKB|F1MI03 - symbol:SRRM2 "Uncharacterized protein"... 127 2.4e-06 2
MGI|MGI:1923206 - symbol:Srrm2 "serine/arginine repetitiv... 125 3.2e-06 1
ZFIN|ZDB-GENE-050522-399 - symbol:srrm2 "serine/arginine ... 112 3.4e-05 1
>FB|FBgn0035253 [details] [associations]
symbol:CG7971 species:7227 "Drosophila melanogaster"
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] EMBL:AE014296 eggNOG:NOG12793 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 KO:K13172 RefSeq:NP_001097475.2
UniGene:Dm.4138 IntAct:A8JNI2 STRING:A8JNI2 PaxDb:A8JNI2
GeneID:38206 KEGG:dme:Dmel_CG7971 UCSC:CG7971-RE
FlyBase:FBgn0035253 OrthoDB:EOG4NK9BZ PhylomeDB:A8JNI2
GenomeRNAi:38206 NextBio:807514 Bgee:A8JNI2 Uniprot:A8JNI2
Length = 1636
Score = 148 (57.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 19 SVKETHQIAEAQLEKNARLRDAFGISEYFVEGSSLDPTRR 58
S ++THQIAEAQ +KNARLR+AF ISEYFVEGSS D R+
Sbjct: 339 SARDTHQIAEAQQQKNARLREAFNISEYFVEGSSFDGDRK 378
Score = 29 (15.3 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 75 RTPSPE 80
RTPSP+
Sbjct: 950 RTPSPK 955
Score = 28 (14.9 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 74 VRTPSPE 80
VRTPS E
Sbjct: 422 VRTPSRE 428
>UNIPROTKB|I3LCW3 [details] [associations]
symbol:SRRM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR024945 SMART:SM01104 GO:GO:0016607
GO:GO:0015030 GO:GO:0071013 InterPro:IPR013170 Pfam:PF08312
OMA:HTPSRRM GeneTree:ENSGT00650000093061 EMBL:FP312929
Ensembl:ENSSSCT00000026941 Uniprot:I3LCW3
Length = 2732
Score = 127 (49.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 15 GSYISVKETHQIAEAQLEKNARLRDAFGISEYFVEGSSLDPTRR 58
G +V ETHQ+AE +KN RLR AFGIS+ +V+GSS DP RR
Sbjct: 113 GQRPAVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRR 156
>UNIPROTKB|Q9UQ35 [details] [associations]
symbol:SRRM2 "Serine/arginine repetitive matrix protein 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016607
"nuclear speck" evidence=IDA] [GO:0070742 "C2H2 zinc finger domain
binding" evidence=IDA] [GO:0015030 "Cajal body" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR024945 SMART:SM01104 GO:GO:0016607
GO:GO:0003723 EMBL:CH471112 eggNOG:NOG12793 GO:GO:0015030
GO:GO:0000398 GO:GO:0071013 InterPro:IPR013170 Pfam:PF08312
EMBL:AC092117 GO:GO:0070742 EMBL:AB015644 EMBL:AB016087
EMBL:AB016089 EMBL:AB016090 EMBL:AB016091 EMBL:AB016092
EMBL:AF201422 EMBL:AB002322 EMBL:BC007752 EMBL:BC009062
EMBL:BC041155 EMBL:BC070050 EMBL:AF161338 IPI:IPI00782992
IPI:IPI00784560 IPI:IPI00785023 RefSeq:NP_057417.3
UniGene:Hs.433343 ProteinModelPortal:Q9UQ35 SMR:Q9UQ35
IntAct:Q9UQ35 MINT:MINT-5006711 STRING:Q9UQ35 PhosphoSite:Q9UQ35
DMDM:143928063 PaxDb:Q9UQ35 PRIDE:Q9UQ35 Ensembl:ENST00000301740
GeneID:23524 KEGG:hsa:23524 UCSC:uc002crj.1 CTD:23524
GeneCards:GC16P002769 H-InvDB:HIX0194349 HGNC:HGNC:16639
HPA:HPA041411 MIM:606032 neXtProt:NX_Q9UQ35 PharmGKB:PA38178
HOVERGEN:HBG093999 InParanoid:Q9UQ35 KO:K13172 OMA:HTPSRRM
PhylomeDB:Q9UQ35 ChiTaRS:SRRM2 GenomeRNAi:23524 NextBio:45984
ArrayExpress:Q9UQ35 Bgee:Q9UQ35 Genevestigator:Q9UQ35
GermOnline:ENSG00000167978 Uniprot:Q9UQ35
Length = 2752
Score = 127 (49.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 15 GSYISVKETHQIAEAQLEKNARLRDAFGISEYFVEGSSLDPTRR 58
G +V ETHQ+AE +KN RLR AFGIS+ +V+GSS DP RR
Sbjct: 113 GQRPAVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRR 156
>UNIPROTKB|F1MI03 [details] [associations]
symbol:SRRM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR024945 SMART:SM01104 GO:GO:0016607
GO:GO:0015030 GO:GO:0071013 InterPro:IPR013170 Pfam:PF08312
OMA:HTPSRRM GeneTree:ENSGT00650000093061 EMBL:DAAA02057317
EMBL:DAAA02057318 IPI:IPI00688395 PRIDE:F1MI03
Ensembl:ENSBTAT00000037527 ArrayExpress:F1MI03 Uniprot:F1MI03
Length = 2724
Score = 127 (49.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 15 GSYISVKETHQIAEAQLEKNARLRDAFGISEYFVEGSSLDPTRR 58
G +V ETHQ+AE +KN RLR AFGIS+ +V+GSS DP RR
Sbjct: 113 GQRPAVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRR 156
Score = 28 (14.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 75 RTPSPELG 82
RTPS E G
Sbjct: 1176 RTPSRERG 1183
>MGI|MGI:1923206 [details] [associations]
symbol:Srrm2 "serine/arginine repetitive matrix 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=ISO] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0070742 "C2H2 zinc finger domain binding"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR024945 SMART:SM01104 MGI:MGI:1923206
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 eggNOG:NOG12793
GO:GO:0015030 GO:GO:0071013 InterPro:IPR013170 Pfam:PF08312
EMBL:AC122821 CTD:23524 HOVERGEN:HBG093999 KO:K13172 OMA:HTPSRRM
ChiTaRS:SRRM2 EMBL:AK090123 EMBL:AK171001 EMBL:BC027781
EMBL:BC092355 EMBL:AK122248 IPI:IPI00225062 IPI:IPI00785240
IPI:IPI00785384 RefSeq:NP_780438.2 UniGene:Mm.436876
UniGene:Mm.5222 STRING:Q8BTI8 PhosphoSite:Q8BTI8
REPRODUCTION-2DPAGE:IPI00225062 REPRODUCTION-2DPAGE:IPI00785240
PaxDb:Q8BTI8 PRIDE:Q8BTI8 Ensembl:ENSMUST00000088621 GeneID:75956
KEGG:mmu:75956 UCSC:uc008atn.1 UCSC:uc008ato.1
GeneTree:ENSGT00650000093061 HOGENOM:HOG000154424 InParanoid:Q8BTI8
OrthoDB:EOG476K1K NextBio:344335 Bgee:Q8BTI8 CleanEx:MM_SRRM2
Genevestigator:Q8BTI8 GermOnline:ENSMUSG00000039218 Uniprot:Q8BTI8
Length = 2703
Score = 125 (49.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 20 VKETHQIAEAQLEKNARLRDAFGISEYFVEGSSLDPTRR 58
V ETHQ+AE +KN RLR AFGIS+ +V+GSS DP RR
Sbjct: 118 VTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRR 156
>ZFIN|ZDB-GENE-050522-399 [details] [associations]
symbol:srrm2 "serine/arginine repetitive matrix 2"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-050522-399 InterPro:IPR013170
Pfam:PF08312 CTD:23524 KO:K13172 GeneTree:ENSGT00650000093061
EMBL:BX571714 EMBL:CU459155 IPI:IPI00995387 IPI:IPI00996856
RefSeq:NP_001025246.2 UniGene:Dr.82712 Ensembl:ENSDART00000129339
Ensembl:ENSDART00000129377 GeneID:553531 KEGG:dre:553531
NextBio:20880276 Uniprot:F1QLP6
Length = 1282
Score = 112 (44.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 5 QRHSSPLSRVGSYISVKETHQIAEAQLEKNARLRDAFGISEYFVEGSSLDPTRR 58
Q P +V ETH +A A +KN RLR AFGIS +V+GSS +P R+
Sbjct: 101 QERQEPAPPPTEKTAVTETHALAAANQQKNDRLRQAFGISSDYVDGSSFNPDRK 154
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 95 67 0.00091 102 3 11 22 0.44 28
29 0.49 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 424 (45 KB)
Total size of DFA: 73 KB (2062 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.13u 0.08s 8.21t Elapsed: 00:00:03
Total cpu time: 8.13u 0.08s 8.21t Elapsed: 00:00:03
Start: Thu Aug 15 15:41:17 2013 End: Thu Aug 15 15:41:20 2013