Query psy1940
Match_columns 78
No_of_seqs 106 out of 1052
Neff 9.2
Searched_HMMs 46136
Date Fri Aug 16 20:12:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1940.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1940hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 99.6 4.9E-15 1.1E-19 95.9 6.1 69 3-78 138-208 (480)
2 KOG0272|consensus 99.6 6E-15 1.3E-19 96.0 5.5 63 7-75 329-391 (459)
3 KOG0263|consensus 99.5 1.3E-14 2.8E-19 99.1 6.5 65 3-74 558-622 (707)
4 KOG2110|consensus 99.5 2.8E-13 6E-18 87.1 8.9 68 4-77 155-222 (391)
5 KOG0266|consensus 99.5 3.8E-13 8.3E-18 89.4 8.9 67 4-76 227-293 (456)
6 KOG0273|consensus 99.5 2.7E-13 5.8E-18 89.4 7.7 69 3-78 433-501 (524)
7 KOG0269|consensus 99.4 1.2E-12 2.6E-17 90.2 6.3 70 3-78 200-271 (839)
8 PF00400 WD40: WD domain, G-be 99.4 1.4E-12 3E-17 59.5 4.7 38 19-57 2-39 (39)
9 KOG0295|consensus 99.4 4.8E-12 1E-16 81.5 7.8 65 4-75 316-380 (406)
10 KOG2111|consensus 99.3 1.7E-11 3.8E-16 77.9 9.0 70 4-77 161-230 (346)
11 PTZ00421 coronin; Provisional 99.3 1.5E-11 3.3E-16 82.7 9.2 63 4-73 150-212 (493)
12 KOG0272|consensus 99.3 2E-12 4.2E-17 84.4 4.0 62 7-74 287-348 (459)
13 KOG0315|consensus 99.3 1.3E-11 2.9E-16 76.7 7.4 66 4-75 63-128 (311)
14 KOG0271|consensus 99.3 3.1E-12 6.7E-17 83.1 4.7 59 19-78 358-417 (480)
15 KOG0286|consensus 99.3 1.4E-11 3E-16 77.8 6.8 60 4-70 211-270 (343)
16 KOG0264|consensus 99.3 1.9E-11 4.2E-16 79.9 7.5 71 3-78 251-324 (422)
17 KOG0286|consensus 99.3 2.1E-11 4.5E-16 77.0 7.0 63 7-75 170-233 (343)
18 KOG0291|consensus 99.2 6.2E-11 1.3E-15 81.9 8.0 63 7-75 334-396 (893)
19 KOG0279|consensus 99.2 6.5E-11 1.4E-15 74.3 7.1 66 4-76 174-239 (315)
20 KOG0266|consensus 99.2 1.1E-10 2.4E-15 77.7 8.3 63 4-73 270-334 (456)
21 KOG0282|consensus 99.2 2.9E-11 6.3E-16 80.0 4.8 65 4-74 239-303 (503)
22 PTZ00421 coronin; Provisional 99.2 5.6E-10 1.2E-14 75.2 10.1 73 4-78 100-176 (493)
23 KOG0319|consensus 99.2 1.2E-10 2.6E-15 80.1 6.7 64 4-74 487-550 (775)
24 KOG0284|consensus 99.1 2.2E-11 4.8E-16 79.4 2.5 68 4-78 246-314 (464)
25 KOG0289|consensus 99.1 1.6E-10 3.5E-15 76.0 6.0 58 4-68 371-428 (506)
26 KOG1407|consensus 99.1 2.3E-10 5E-15 71.6 6.1 66 7-78 215-280 (313)
27 PTZ00420 coronin; Provisional 99.1 9.5E-10 2.1E-14 75.1 9.6 62 4-73 150-211 (568)
28 PLN00181 protein SPA1-RELATED; 99.1 9E-10 2E-14 77.2 9.5 62 4-72 557-619 (793)
29 KOG1273|consensus 99.1 2.9E-10 6.2E-15 72.8 6.2 58 7-70 49-106 (405)
30 KOG0316|consensus 99.1 2.8E-10 6E-15 70.5 5.7 62 4-72 83-146 (307)
31 KOG0318|consensus 99.1 8.6E-10 1.9E-14 74.0 8.4 60 7-72 216-278 (603)
32 KOG0302|consensus 99.1 7.8E-10 1.7E-14 71.9 7.9 71 3-78 281-355 (440)
33 KOG0645|consensus 99.1 8.8E-10 1.9E-14 69.2 7.6 63 15-78 92-158 (312)
34 KOG0285|consensus 99.1 9.6E-10 2.1E-14 71.3 7.9 65 4-75 259-323 (460)
35 KOG0315|consensus 99.1 8.1E-10 1.8E-14 68.9 7.2 64 7-75 241-304 (311)
36 KOG0263|consensus 99.1 4.1E-10 8.9E-15 77.6 6.2 63 7-75 519-581 (707)
37 KOG0308|consensus 99.1 8.1E-10 1.8E-14 75.5 7.3 63 4-73 195-257 (735)
38 KOG0265|consensus 99.1 1E-09 2.2E-14 69.6 7.2 65 7-76 73-137 (338)
39 KOG0647|consensus 99.1 1.2E-09 2.5E-14 69.4 7.2 70 3-78 51-121 (347)
40 KOG1539|consensus 99.0 7.7E-10 1.7E-14 77.1 6.6 57 7-69 560-616 (910)
41 KOG0285|consensus 99.0 4.8E-10 1E-14 72.7 5.2 65 4-75 217-281 (460)
42 KOG0296|consensus 99.0 2.9E-09 6.2E-14 68.9 8.5 57 6-68 89-145 (399)
43 PTZ00420 coronin; Provisional 99.0 3.7E-09 7.9E-14 72.3 9.2 58 20-78 66-133 (568)
44 KOG0649|consensus 99.0 1.2E-09 2.5E-14 68.1 5.9 64 7-76 140-203 (325)
45 KOG0639|consensus 99.0 2.2E-10 4.8E-15 76.8 2.8 55 7-67 535-589 (705)
46 KOG0278|consensus 99.0 2.3E-09 5E-14 67.0 6.3 54 2-62 246-300 (334)
47 KOG0319|consensus 99.0 1.4E-09 3E-14 75.0 5.6 64 3-73 528-591 (775)
48 KOG0281|consensus 99.0 3.9E-10 8.5E-15 73.1 2.7 61 4-73 219-279 (499)
49 KOG0316|consensus 99.0 1.7E-09 3.6E-14 67.2 5.3 65 4-75 41-105 (307)
50 KOG0279|consensus 99.0 5E-09 1.1E-13 66.0 7.4 67 7-74 42-108 (315)
51 KOG0267|consensus 98.9 1.4E-09 3E-14 75.1 4.9 62 7-74 138-199 (825)
52 KOG0274|consensus 98.9 5.6E-09 1.2E-13 71.1 7.6 63 4-75 313-375 (537)
53 KOG1445|consensus 98.9 2.6E-09 5.6E-14 73.6 5.8 54 3-63 701-754 (1012)
54 KOG0277|consensus 98.9 6.7E-09 1.4E-13 65.0 7.0 69 3-78 171-242 (311)
55 KOG0265|consensus 98.9 4.3E-09 9.3E-14 66.8 6.2 60 4-70 198-261 (338)
56 KOG0303|consensus 98.9 7.7E-09 1.7E-13 67.7 7.4 59 4-70 156-214 (472)
57 KOG0274|consensus 98.9 9.9E-09 2.1E-13 69.9 8.3 67 3-76 229-296 (537)
58 KOG0643|consensus 98.9 1.2E-08 2.6E-13 64.2 7.7 59 7-71 36-94 (327)
59 cd00200 WD40 WD40 domain, foun 98.9 1.6E-08 3.4E-13 60.5 7.9 64 4-74 159-222 (289)
60 KOG0293|consensus 98.9 3.7E-09 8E-14 69.6 5.4 69 7-78 250-320 (519)
61 KOG4283|consensus 98.9 9.9E-09 2.1E-13 65.5 6.9 61 3-70 169-231 (397)
62 KOG0306|consensus 98.9 5.4E-09 1.2E-13 72.6 6.1 65 4-75 89-153 (888)
63 KOG0275|consensus 98.9 5.7E-10 1.2E-14 71.9 1.2 66 3-75 286-352 (508)
64 KOG0291|consensus 98.9 9.8E-09 2.1E-13 71.4 7.2 49 7-61 462-510 (893)
65 cd00200 WD40 WD40 domain, foun 98.9 1E-08 2.2E-13 61.4 6.5 56 22-78 3-59 (289)
66 KOG0273|consensus 98.9 1.1E-08 2.4E-13 68.0 7.0 58 20-78 268-326 (524)
67 KOG0276|consensus 98.9 1E-08 2.2E-13 70.3 7.0 68 3-76 120-188 (794)
68 KOG0650|consensus 98.9 1.2E-08 2.6E-13 69.6 7.2 59 19-78 391-449 (733)
69 KOG0284|consensus 98.9 3.7E-09 7.9E-14 69.3 4.5 65 4-75 204-268 (464)
70 KOG1446|consensus 98.8 1.9E-08 4E-13 63.9 7.1 50 19-69 91-140 (311)
71 KOG0292|consensus 98.8 3.4E-09 7.4E-14 74.8 3.8 65 4-75 33-97 (1202)
72 KOG0264|consensus 98.8 1.5E-08 3.2E-13 66.7 6.4 52 3-60 296-348 (422)
73 KOG1407|consensus 98.8 1.2E-08 2.5E-13 64.0 5.4 57 18-75 179-235 (313)
74 KOG0277|consensus 98.8 3.9E-08 8.4E-13 61.6 7.4 61 4-71 129-190 (311)
75 KOG0275|consensus 98.8 6.3E-09 1.4E-13 67.2 3.7 52 18-70 338-389 (508)
76 KOG0281|consensus 98.8 1.7E-09 3.8E-14 70.1 0.9 63 4-75 342-404 (499)
77 KOG0302|consensus 98.8 2.5E-08 5.3E-13 65.1 6.1 54 3-60 325-379 (440)
78 KOG0276|consensus 98.8 9.1E-09 2E-13 70.5 4.2 65 4-75 165-231 (794)
79 KOG2394|consensus 98.8 1.5E-08 3.3E-13 68.4 5.1 66 3-75 313-378 (636)
80 KOG0310|consensus 98.8 1.4E-08 3.1E-13 67.4 4.8 66 4-76 92-158 (487)
81 KOG0283|consensus 98.8 2.4E-08 5.2E-13 69.3 6.1 53 4-64 392-445 (712)
82 KOG0645|consensus 98.8 5.5E-08 1.2E-12 61.2 7.2 69 7-78 41-113 (312)
83 KOG0307|consensus 98.7 2.1E-08 4.5E-13 71.7 4.9 69 4-78 234-304 (1049)
84 KOG0294|consensus 98.7 6.9E-08 1.5E-12 61.8 6.7 65 4-75 65-131 (362)
85 KOG0288|consensus 98.7 9.1E-08 2E-12 62.9 7.3 61 7-73 367-431 (459)
86 KOG0310|consensus 98.7 9.4E-08 2E-12 63.6 7.3 66 4-76 135-202 (487)
87 KOG2096|consensus 98.7 2E-08 4.3E-13 64.6 3.9 39 21-60 79-117 (420)
88 KOG0772|consensus 98.7 3.1E-08 6.6E-13 66.8 4.7 59 4-66 341-402 (641)
89 KOG0295|consensus 98.7 4.3E-08 9.3E-13 63.6 5.2 66 7-78 219-285 (406)
90 smart00320 WD40 WD40 repeats. 98.7 9.7E-08 2.1E-12 41.0 4.8 37 20-57 4-40 (40)
91 KOG0296|consensus 98.7 9.4E-08 2E-12 62.1 6.4 49 19-68 181-229 (399)
92 KOG0305|consensus 98.7 1.1E-07 2.4E-12 64.0 6.8 66 7-78 327-395 (484)
93 PLN00181 protein SPA1-RELATED; 98.7 3.5E-07 7.6E-12 64.4 9.3 65 4-75 642-712 (793)
94 KOG0305|consensus 98.6 5.1E-08 1.1E-12 65.6 4.9 67 7-78 284-351 (484)
95 KOG0283|consensus 98.6 3.8E-08 8.1E-13 68.4 4.2 39 21-60 259-298 (712)
96 KOG1332|consensus 98.6 1.5E-07 3.2E-12 58.8 6.0 71 4-78 35-110 (299)
97 TIGR03866 PQQ_ABC_repeats PQQ- 98.6 5.2E-07 1.1E-11 55.5 8.5 63 7-76 233-296 (300)
98 KOG1034|consensus 98.6 1.2E-07 2.6E-12 61.1 5.7 51 4-61 160-213 (385)
99 KOG0293|consensus 98.6 9.8E-08 2.1E-12 63.1 5.2 59 19-78 215-277 (519)
100 KOG0639|consensus 98.6 7.2E-08 1.6E-12 65.1 4.6 68 4-76 489-556 (705)
101 KOG0647|consensus 98.6 2.3E-07 4.9E-12 59.2 6.4 57 4-68 96-154 (347)
102 KOG0313|consensus 98.6 1.7E-07 3.6E-12 61.2 5.9 65 7-74 326-392 (423)
103 KOG0278|consensus 98.6 1.4E-07 3.1E-12 59.2 5.2 59 7-70 126-184 (334)
104 KOG0282|consensus 98.6 1.5E-08 3.2E-13 67.4 0.9 59 19-78 205-266 (503)
105 KOG0268|consensus 98.6 1.9E-07 4.1E-12 60.8 5.8 66 7-78 171-237 (433)
106 KOG0646|consensus 98.6 5E-08 1.1E-12 64.7 3.0 56 19-75 266-323 (476)
107 KOG0308|consensus 98.6 3.4E-07 7.5E-12 63.0 7.1 69 7-76 144-218 (735)
108 KOG0640|consensus 98.6 1E-07 2.2E-12 61.4 4.0 66 4-76 240-308 (430)
109 KOG0270|consensus 98.5 4.7E-07 1E-11 60.0 7.1 69 3-78 267-337 (463)
110 KOG0318|consensus 98.5 4E-07 8.7E-12 61.5 6.9 57 21-78 183-243 (603)
111 KOG0973|consensus 98.5 1.8E-07 4E-12 66.5 5.2 58 20-78 121-179 (942)
112 PF08662 eIF2A: Eukaryotic tra 98.5 9.2E-07 2E-11 53.3 7.6 64 4-78 85-151 (194)
113 KOG1034|consensus 98.5 3E-07 6.4E-12 59.3 5.2 50 19-69 126-176 (385)
114 TIGR03866 PQQ_ABC_repeats PQQ- 98.5 1.5E-06 3.3E-11 53.5 8.3 65 4-76 13-78 (300)
115 KOG1274|consensus 98.5 4.5E-07 9.7E-12 64.2 5.9 57 7-69 122-178 (933)
116 KOG0300|consensus 98.5 6.1E-07 1.3E-11 58.1 6.0 59 7-71 340-399 (481)
117 KOG0299|consensus 98.5 2.9E-07 6.2E-12 61.1 4.6 49 26-75 200-248 (479)
118 KOG0267|consensus 98.5 1.4E-07 3E-12 65.6 3.2 66 4-76 94-159 (825)
119 KOG0641|consensus 98.4 2.6E-06 5.6E-11 53.2 8.2 66 7-78 257-327 (350)
120 KOG1272|consensus 98.4 2.6E-07 5.7E-12 61.7 4.1 51 18-69 283-333 (545)
121 KOG0289|consensus 98.4 8.5E-07 1.9E-11 58.9 6.3 46 29-75 348-393 (506)
122 KOG0294|consensus 98.4 9E-07 1.9E-11 56.8 6.2 66 7-78 111-176 (362)
123 KOG0290|consensus 98.4 6.4E-07 1.4E-11 57.2 5.2 52 3-60 267-319 (364)
124 KOG0642|consensus 98.4 4.7E-07 1E-11 61.4 4.8 52 7-59 320-374 (577)
125 KOG1007|consensus 98.4 4.5E-07 9.7E-12 57.9 4.3 62 4-72 195-259 (370)
126 KOG0268|consensus 98.4 1.7E-07 3.6E-12 61.1 2.3 51 7-62 255-305 (433)
127 KOG1538|consensus 98.4 5.9E-07 1.3E-11 62.6 4.9 47 7-59 37-83 (1081)
128 KOG0643|consensus 98.4 7.1E-07 1.5E-11 56.4 4.8 60 4-69 171-230 (327)
129 KOG1445|consensus 98.4 6.8E-07 1.5E-11 62.0 4.9 66 7-78 154-222 (1012)
130 KOG0313|consensus 98.4 1.8E-06 3.9E-11 56.5 6.4 67 4-78 283-353 (423)
131 KOG1009|consensus 98.4 7.2E-07 1.6E-11 58.6 4.5 58 20-78 115-173 (434)
132 KOG1446|consensus 98.4 3E-06 6.5E-11 54.1 7.2 53 20-73 6-58 (311)
133 KOG0646|consensus 98.4 8.8E-07 1.9E-11 58.9 4.8 63 7-75 107-178 (476)
134 KOG0771|consensus 98.3 5.6E-07 1.2E-11 59.0 3.8 57 3-67 167-223 (398)
135 KOG0299|consensus 98.3 3.7E-07 8.1E-12 60.6 2.9 64 4-74 226-289 (479)
136 KOG0640|consensus 98.3 9.2E-07 2E-11 57.0 4.6 58 7-70 287-346 (430)
137 KOG0269|consensus 98.3 7.5E-07 1.6E-11 62.3 4.3 69 7-78 114-184 (839)
138 KOG0292|consensus 98.3 3.3E-06 7.1E-11 60.3 7.2 63 4-73 75-137 (1202)
139 KOG0290|consensus 98.3 5.1E-06 1.1E-10 53.2 7.4 69 7-78 177-250 (364)
140 KOG2096|consensus 98.3 9.2E-07 2E-11 57.1 3.9 52 7-59 254-308 (420)
141 KOG2139|consensus 98.3 5.3E-06 1.1E-10 54.4 7.2 53 25-78 193-246 (445)
142 KOG0641|consensus 98.3 9.3E-06 2E-10 50.7 7.9 66 4-76 206-278 (350)
143 KOG0306|consensus 98.3 2.2E-06 4.8E-11 60.1 5.5 54 20-74 542-595 (888)
144 KOG0300|consensus 98.3 9.4E-07 2E-11 57.2 3.4 46 6-57 173-218 (481)
145 KOG1310|consensus 98.3 1.5E-06 3.2E-11 59.4 4.5 52 20-72 42-93 (758)
146 KOG2048|consensus 98.2 4.9E-06 1.1E-10 57.5 6.3 43 22-65 148-190 (691)
147 COG2319 FOG: WD40 repeat [Gene 98.2 2.5E-05 5.4E-10 48.4 8.7 63 7-75 138-202 (466)
148 KOG0973|consensus 98.2 6.2E-06 1.3E-10 59.1 6.3 55 7-67 155-209 (942)
149 KOG1188|consensus 98.2 3.7E-06 8.1E-11 54.4 4.8 52 3-60 144-197 (376)
150 PF02239 Cytochrom_D1: Cytochr 98.2 2.1E-05 4.6E-10 51.6 8.4 64 7-76 20-83 (369)
151 KOG0288|consensus 98.2 5.8E-07 1.3E-11 59.3 1.0 61 4-71 243-303 (459)
152 KOG4328|consensus 98.2 1.1E-05 2.4E-10 53.9 6.7 51 7-59 349-399 (498)
153 KOG0322|consensus 98.1 2.7E-06 5.8E-11 53.8 3.4 38 20-58 285-322 (323)
154 KOG1009|consensus 98.1 1.2E-05 2.7E-10 53.0 6.4 52 7-59 40-95 (434)
155 KOG1273|consensus 98.1 3.2E-06 6.9E-11 54.6 3.4 47 31-78 26-73 (405)
156 COG2319 FOG: WD40 repeat [Gene 98.1 4.9E-05 1.1E-09 47.1 8.6 63 4-73 180-244 (466)
157 KOG1063|consensus 98.1 9.9E-06 2.1E-10 56.4 5.8 49 7-61 556-604 (764)
158 KOG2445|consensus 98.1 2.1E-05 4.5E-10 50.6 6.8 57 21-78 5-67 (361)
159 KOG0303|consensus 98.1 6.8E-06 1.5E-10 54.3 4.3 58 20-78 73-139 (472)
160 KOG0270|consensus 98.1 2.1E-06 4.6E-11 56.9 1.8 53 25-78 240-294 (463)
161 PF08662 eIF2A: Eukaryotic tra 98.0 9.5E-05 2.1E-09 44.6 8.5 65 7-78 41-108 (194)
162 KOG1332|consensus 98.0 4.9E-06 1.1E-10 52.1 2.9 53 25-78 8-64 (299)
163 KOG1408|consensus 98.0 1.1E-05 2.3E-10 56.9 4.8 56 19-75 69-126 (1080)
164 KOG0974|consensus 98.0 2.4E-05 5.2E-10 56.2 6.5 48 23-71 170-218 (967)
165 KOG2111|consensus 98.0 3.3E-05 7.1E-10 49.8 6.4 48 7-60 208-257 (346)
166 KOG1036|consensus 98.0 8.1E-06 1.8E-10 52.2 3.1 42 30-72 234-275 (323)
167 KOG4378|consensus 98.0 5.2E-05 1.1E-09 51.6 7.0 65 7-78 235-301 (673)
168 KOG0301|consensus 98.0 2.5E-05 5.3E-10 54.4 5.5 52 19-73 170-221 (745)
169 KOG1007|consensus 98.0 3.3E-05 7.2E-10 49.5 5.8 52 3-60 238-290 (370)
170 KOG1524|consensus 97.9 2.4E-06 5.2E-11 58.3 0.4 52 20-73 96-147 (737)
171 KOG0772|consensus 97.9 2.8E-05 6E-10 53.0 5.4 52 4-61 293-349 (641)
172 KOG1188|consensus 97.9 2.4E-05 5.3E-10 50.8 4.9 54 7-66 54-109 (376)
173 KOG2394|consensus 97.9 7.5E-06 1.6E-10 55.8 2.5 48 20-68 282-329 (636)
174 KOG1036|consensus 97.9 0.0001 2.2E-09 47.3 6.8 51 7-64 79-129 (323)
175 KOG4547|consensus 97.8 0.00014 3.1E-09 49.7 7.6 54 20-76 136-189 (541)
176 KOG0301|consensus 97.8 0.00016 3.5E-09 50.6 7.9 54 7-69 204-257 (745)
177 KOG1274|consensus 97.8 0.0001 2.2E-09 52.7 6.9 40 20-60 222-263 (933)
178 KOG1524|consensus 97.8 5.4E-05 1.2E-09 52.0 5.4 57 20-78 178-235 (737)
179 KOG4328|consensus 97.8 2.2E-05 4.9E-10 52.5 3.5 49 7-60 305-354 (498)
180 KOG1408|consensus 97.8 8.3E-05 1.8E-09 52.6 6.2 65 4-75 620-687 (1080)
181 KOG4283|consensus 97.7 0.00019 4.1E-09 46.3 6.5 68 3-78 125-196 (397)
182 KOG4714|consensus 97.7 2.3E-05 5E-10 49.6 2.2 49 7-60 206-255 (319)
183 KOG2919|consensus 97.7 7.5E-05 1.6E-09 48.5 4.1 61 7-72 277-341 (406)
184 PF12894 Apc4_WD40: Anaphase-p 97.7 0.00025 5.4E-09 33.7 4.9 33 28-62 11-43 (47)
185 KOG0644|consensus 97.7 1E-05 2.2E-10 57.6 0.0 63 7-75 216-278 (1113)
186 KOG0644|consensus 97.7 3.8E-05 8.1E-10 54.9 2.8 54 21-75 183-236 (1113)
187 KOG0322|consensus 97.6 0.00011 2.4E-09 46.6 4.5 48 27-75 250-297 (323)
188 KOG1063|consensus 97.6 0.00038 8.3E-09 48.8 7.3 53 20-73 46-103 (764)
189 KOG4640|consensus 97.6 0.00021 4.6E-09 49.6 6.0 46 20-66 53-99 (665)
190 KOG2919|consensus 97.6 0.0001 2.2E-09 48.0 4.2 65 3-71 228-294 (406)
191 KOG0321|consensus 97.6 5.9E-05 1.3E-09 52.3 3.3 49 7-61 126-177 (720)
192 KOG3881|consensus 97.6 0.00013 2.8E-09 48.2 4.2 54 7-66 273-327 (412)
193 KOG4497|consensus 97.6 0.00037 8E-09 45.6 6.1 55 3-64 72-127 (447)
194 KOG1539|consensus 97.6 0.00062 1.3E-08 48.6 7.6 63 4-73 184-246 (910)
195 PRK01742 tolB translocation pr 97.5 0.00066 1.4E-08 45.2 7.0 43 20-63 195-240 (429)
196 KOG1587|consensus 97.5 0.00079 1.7E-08 46.6 7.4 67 6-78 225-299 (555)
197 KOG2106|consensus 97.5 0.0012 2.6E-08 45.2 8.0 40 20-60 439-478 (626)
198 PF02239 Cytochrom_D1: Cytochr 97.5 0.00093 2E-08 44.0 7.2 59 4-70 60-119 (369)
199 KOG3881|consensus 97.5 0.00063 1.4E-08 45.0 6.2 58 3-66 227-284 (412)
200 KOG0307|consensus 97.4 0.00018 3.8E-09 52.3 3.9 56 7-63 94-151 (1049)
201 KOG2695|consensus 97.4 0.0004 8.6E-09 45.6 5.1 64 7-72 278-345 (425)
202 KOG1912|consensus 97.4 0.00038 8.2E-09 49.7 4.9 66 7-78 39-117 (1062)
203 KOG1538|consensus 97.3 0.0005 1.1E-08 48.6 4.7 47 30-78 14-61 (1081)
204 KOG0280|consensus 97.3 0.0012 2.7E-08 42.5 6.1 56 7-66 192-249 (339)
205 KOG2139|consensus 97.3 0.0016 3.4E-08 43.1 6.7 46 7-58 222-267 (445)
206 TIGR02658 TTQ_MADH_Hv methylam 97.3 0.0042 9.2E-08 40.9 8.6 60 7-73 283-345 (352)
207 PF11768 DUF3312: Protein of u 97.3 0.0021 4.6E-08 44.2 7.4 36 26-62 257-292 (545)
208 KOG3914|consensus 97.3 0.00034 7.5E-09 46.1 3.2 41 26-68 192-232 (390)
209 KOG0321|consensus 97.2 0.0007 1.5E-08 47.2 4.7 67 7-74 78-147 (720)
210 KOG4378|consensus 97.2 0.00089 1.9E-08 45.9 5.0 59 4-69 103-161 (673)
211 KOG2445|consensus 97.2 0.00039 8.5E-09 44.9 3.1 49 20-69 280-331 (361)
212 PF15492 Nbas_N: Neuroblastoma 97.2 0.0011 2.4E-08 42.2 4.9 46 27-73 228-273 (282)
213 PRK05137 tolB translocation pr 97.2 0.0047 1E-07 41.1 8.2 43 20-63 193-238 (435)
214 KOG2079|consensus 97.2 0.00097 2.1E-08 48.9 5.0 48 27-75 129-176 (1206)
215 PF10313 DUF2415: Uncharacteri 97.1 0.0041 8.9E-08 29.0 5.4 32 29-61 1-35 (43)
216 PF15492 Nbas_N: Neuroblastoma 97.1 0.0044 9.6E-08 39.5 7.2 37 31-69 46-82 (282)
217 KOG2321|consensus 97.1 0.0033 7E-08 43.8 6.8 37 30-67 230-266 (703)
218 KOG0649|consensus 97.1 0.0026 5.5E-08 40.4 5.7 48 27-75 113-160 (325)
219 KOG1645|consensus 97.1 0.0011 2.5E-08 44.1 4.3 58 20-78 185-243 (463)
220 KOG2695|consensus 97.0 0.0018 4E-08 42.6 5.0 63 3-69 322-386 (425)
221 KOG1963|consensus 97.0 0.0031 6.7E-08 45.0 6.2 54 18-73 241-294 (792)
222 KOG4227|consensus 97.0 0.00075 1.6E-08 45.2 2.8 40 20-60 48-87 (609)
223 KOG1409|consensus 97.0 0.0027 5.9E-08 41.7 5.3 54 19-73 188-242 (404)
224 PRK01742 tolB translocation pr 97.0 0.0086 1.9E-07 39.9 7.7 32 31-63 250-284 (429)
225 PRK04922 tolB translocation pr 96.9 0.005 1.1E-07 41.0 6.6 43 20-63 195-240 (433)
226 KOG2048|consensus 96.9 0.011 2.4E-07 41.6 7.8 54 7-66 94-147 (691)
227 PRK02889 tolB translocation pr 96.9 0.011 2.3E-07 39.5 7.5 44 20-64 187-233 (427)
228 KOG1334|consensus 96.8 0.0011 2.4E-08 45.1 2.9 51 20-71 134-184 (559)
229 KOG0771|consensus 96.8 0.0054 1.2E-07 40.8 5.9 42 28-70 281-322 (398)
230 TIGR02276 beta_rpt_yvtn 40-res 96.8 0.011 2.4E-07 26.5 6.2 39 38-77 1-40 (42)
231 KOG2110|consensus 96.8 0.0077 1.7E-07 39.8 6.3 50 7-62 200-251 (391)
232 KOG0642|consensus 96.8 0.0022 4.8E-08 44.1 4.0 51 19-70 522-572 (577)
233 TIGR02658 TTQ_MADH_Hv methylam 96.7 0.016 3.6E-07 38.2 7.4 59 7-73 31-99 (352)
234 KOG2055|consensus 96.7 0.0073 1.6E-07 41.0 5.6 40 28-68 344-383 (514)
235 TIGR02800 propeller_TolB tol-p 96.6 0.014 3.1E-07 38.2 6.9 44 20-64 181-227 (417)
236 KOG1240|consensus 96.6 0.0024 5.2E-08 47.5 3.4 41 19-60 1039-1080(1431)
237 KOG0280|consensus 96.6 0.006 1.3E-07 39.4 4.8 44 20-64 157-202 (339)
238 KOG1645|consensus 96.6 0.0091 2E-07 40.0 5.7 52 2-61 216-268 (463)
239 KOG1523|consensus 96.6 0.012 2.6E-07 38.4 6.0 56 22-78 4-63 (361)
240 PRK03629 tolB translocation pr 96.6 0.028 6E-07 37.6 7.9 43 20-63 190-235 (429)
241 KOG1064|consensus 96.5 0.002 4.3E-08 49.7 2.3 58 6-68 2318-2375(2439)
242 KOG1310|consensus 96.5 0.01 2.2E-07 41.4 5.5 48 7-60 76-126 (758)
243 KOG1523|consensus 96.5 0.01 2.2E-07 38.7 5.1 42 19-61 46-87 (361)
244 PRK03629 tolB translocation pr 96.5 0.025 5.4E-07 37.8 7.2 38 30-68 244-284 (429)
245 PRK05137 tolB translocation pr 96.4 0.025 5.5E-07 37.7 6.9 52 7-64 230-283 (435)
246 PRK11028 6-phosphogluconolacto 96.4 0.024 5.2E-07 36.2 6.6 45 30-75 275-324 (330)
247 KOG2106|consensus 96.3 0.034 7.4E-07 38.4 7.3 63 7-73 226-289 (626)
248 KOG1587|consensus 96.3 0.006 1.3E-07 42.4 3.8 58 20-78 390-449 (555)
249 KOG3914|consensus 96.3 0.0078 1.7E-07 39.9 4.1 48 20-68 143-190 (390)
250 PF07433 DUF1513: Protein of u 96.3 0.065 1.4E-06 34.8 8.1 60 3-70 29-97 (305)
251 PRK04922 tolB translocation pr 96.2 0.044 9.4E-07 36.6 7.4 40 24-64 243-285 (433)
252 KOG1963|consensus 96.2 0.031 6.7E-07 40.2 6.6 61 4-71 39-102 (792)
253 PRK00178 tolB translocation pr 96.2 0.043 9.2E-07 36.4 7.1 43 20-63 190-235 (430)
254 KOG0974|consensus 96.1 0.015 3.3E-07 42.4 5.1 58 4-70 199-256 (967)
255 KOG2315|consensus 96.1 0.012 2.6E-07 40.6 4.3 51 7-66 340-396 (566)
256 PRK02889 tolB translocation pr 96.0 0.054 1.2E-06 36.2 7.1 45 7-58 224-269 (427)
257 KOG1832|consensus 96.0 0.016 3.5E-07 42.6 4.7 56 19-75 1092-1147(1516)
258 KOG4532|consensus 96.0 0.085 1.8E-06 34.1 7.5 63 3-67 226-290 (344)
259 PRK01029 tolB translocation pr 96.0 0.073 1.6E-06 35.7 7.6 44 21-65 319-365 (428)
260 PRK11028 6-phosphogluconolacto 95.9 0.052 1.1E-06 34.6 6.5 30 30-60 176-206 (330)
261 PRK00178 tolB translocation pr 95.9 0.075 1.6E-06 35.2 7.2 37 27-64 241-280 (430)
262 KOG4547|consensus 95.8 0.022 4.8E-07 39.3 4.5 49 4-59 166-220 (541)
263 KOG0650|consensus 95.7 0.0045 9.8E-08 43.3 1.1 63 3-72 588-651 (733)
264 KOG4190|consensus 95.7 0.0051 1.1E-07 43.0 1.3 55 20-75 727-788 (1034)
265 KOG1517|consensus 95.6 0.054 1.2E-06 40.5 6.0 51 7-60 1235-1288(1387)
266 KOG2055|consensus 95.6 0.03 6.4E-07 38.2 4.5 65 3-72 281-346 (514)
267 KOG2315|consensus 95.6 0.09 1.9E-06 36.5 6.7 46 23-69 306-354 (566)
268 TIGR02800 propeller_TolB tol-p 95.6 0.13 2.9E-06 33.6 7.4 39 24-63 229-270 (417)
269 PF10282 Lactonase: Lactonase, 95.6 0.28 6E-06 31.9 8.8 71 7-78 271-345 (345)
270 KOG4190|consensus 95.5 0.018 4E-07 40.4 3.4 61 3-67 758-820 (1034)
271 PF11715 Nup160: Nucleoporin N 95.5 0.063 1.4E-06 36.9 5.9 38 30-68 216-257 (547)
272 KOG2321|consensus 95.3 0.047 1E-06 38.3 4.8 47 21-68 168-214 (703)
273 PRK04792 tolB translocation pr 95.1 0.13 2.7E-06 34.8 6.2 42 21-63 210-254 (448)
274 PF04841 Vps16_N: Vps16, N-ter 95.0 0.21 4.6E-06 33.5 7.1 49 29-78 217-267 (410)
275 KOG4227|consensus 95.0 0.12 2.5E-06 35.1 5.8 62 7-69 82-145 (609)
276 PF06433 Me-amine-dh_H: Methyl 95.0 0.13 2.9E-06 33.9 6.0 49 20-70 281-331 (342)
277 PRK01029 tolB translocation pr 94.9 0.35 7.7E-06 32.5 8.0 55 7-68 355-412 (428)
278 PF14783 BBS2_Mid: Ciliary BBS 94.8 0.28 6.1E-06 27.4 6.2 43 31-76 2-48 (111)
279 PF07433 DUF1513: Protein of u 94.7 0.17 3.7E-06 32.9 5.9 41 28-68 216-256 (305)
280 KOG1517|consensus 94.6 0.16 3.5E-06 38.1 6.1 63 4-73 1189-1256(1387)
281 PRK04792 tolB translocation pr 94.6 0.28 6E-06 33.1 6.9 33 31-63 264-298 (448)
282 COG4946 Uncharacterized protei 94.5 0.6 1.3E-05 32.5 8.3 43 20-63 393-435 (668)
283 PF11768 DUF3312: Protein of u 94.5 0.25 5.3E-06 34.5 6.5 32 29-61 300-331 (545)
284 KOG0882|consensus 94.3 0.026 5.7E-07 38.5 1.5 44 25-69 198-241 (558)
285 KOG2314|consensus 94.0 0.19 4.2E-06 35.3 5.1 48 6-60 285-335 (698)
286 KOG0309|consensus 93.9 0.18 3.9E-06 36.7 5.0 66 3-74 138-204 (1081)
287 KOG0309|consensus 93.7 0.037 7.9E-07 40.0 1.5 49 7-60 184-233 (1081)
288 KOG4497|consensus 93.7 0.3 6.6E-06 32.5 5.5 65 7-78 346-410 (447)
289 KOG1409|consensus 93.7 0.06 1.3E-06 35.7 2.3 39 21-60 357-395 (404)
290 PLN02919 haloacid dehalogenase 93.6 0.53 1.2E-05 35.3 7.2 34 29-63 859-892 (1057)
291 PF07676 PD40: WD40-like Beta 93.6 0.3 6.5E-06 21.5 5.1 22 27-48 7-28 (39)
292 KOG1240|consensus 93.3 0.26 5.7E-06 37.5 5.2 58 7-68 1177-1234(1431)
293 KOG1354|consensus 92.9 0.34 7.4E-06 32.3 4.8 30 27-57 24-53 (433)
294 KOG3621|consensus 92.9 0.33 7.1E-06 34.8 5.0 34 26-60 122-155 (726)
295 KOG1916|consensus 92.8 0.1 2.2E-06 38.7 2.4 43 35-78 242-289 (1283)
296 PF10282 Lactonase: Lactonase, 92.7 1.1 2.3E-05 29.2 7.0 49 28-76 143-197 (345)
297 PF06977 SdiA-regulated: SdiA- 92.7 0.97 2.1E-05 28.6 6.5 54 22-77 15-71 (248)
298 KOG1334|consensus 92.7 0.074 1.6E-06 36.6 1.6 54 22-76 385-441 (559)
299 PF02897 Peptidase_S9_N: Proly 92.6 0.35 7.5E-06 31.9 4.7 34 32-66 127-165 (414)
300 PRK02888 nitrous-oxide reducta 92.5 1.3 2.8E-05 31.7 7.5 41 20-62 313-354 (635)
301 COG5170 CDC55 Serine/threonine 92.5 0.21 4.6E-06 33.0 3.5 41 28-70 280-321 (460)
302 PF04762 IKI3: IKI3 family; I 92.5 0.79 1.7E-05 34.1 6.6 50 27-78 119-174 (928)
303 KOG1354|consensus 92.4 0.25 5.5E-06 32.9 3.8 41 28-70 272-313 (433)
304 KOG3617|consensus 92.4 0.41 8.9E-06 35.6 5.0 39 20-59 92-131 (1416)
305 KOG1275|consensus 92.3 0.15 3.3E-06 37.6 2.9 48 18-68 207-263 (1118)
306 PF14655 RAB3GAP2_N: Rab3 GTPa 92.3 0.64 1.4E-05 31.5 5.6 47 24-71 303-349 (415)
307 KOG2314|consensus 92.2 0.35 7.5E-06 34.1 4.4 39 30-69 251-300 (698)
308 PRK04043 tolB translocation pr 92.1 2.1 4.5E-05 28.9 7.9 36 27-63 231-269 (419)
309 PF08596 Lgl_C: Lethal giant l 91.9 0.91 2E-05 30.5 6.0 58 7-66 61-122 (395)
310 PF01731 Arylesterase: Arylest 91.7 1.1 2.5E-05 23.8 5.2 31 29-59 54-84 (86)
311 KOG2066|consensus 91.6 0.91 2E-05 33.2 6.0 45 23-71 155-199 (846)
312 COG5354 Uncharacterized protei 91.3 1.4 3.1E-05 30.7 6.5 41 26-68 272-314 (561)
313 KOG4532|consensus 91.2 0.44 9.5E-06 30.9 3.8 31 30-61 205-235 (344)
314 PF04053 Coatomer_WDAD: Coatom 90.7 1.4 2.9E-05 30.2 6.0 46 4-59 128-173 (443)
315 smart00564 PQQ beta-propeller 90.7 0.71 1.5E-05 19.3 3.8 25 42-67 8-32 (33)
316 PF07569 Hira: TUP1-like enhan 90.5 0.54 1.2E-05 29.0 3.7 31 34-65 16-46 (219)
317 KOG1064|consensus 90.5 0.082 1.8E-06 41.6 0.1 49 6-70 2361-2409(2439)
318 KOG2041|consensus 89.7 0.26 5.6E-06 35.9 2.0 41 20-61 63-103 (1189)
319 COG3204 Uncharacterized protei 89.6 1.4 3E-05 28.8 5.1 51 26-77 83-135 (316)
320 KOG2066|consensus 89.6 2.3 4.9E-05 31.3 6.5 40 23-63 53-105 (846)
321 COG4946 Uncharacterized protei 89.3 3.9 8.5E-05 28.7 7.2 51 7-64 427-482 (668)
322 KOG4499|consensus 89.0 4.4 9.6E-05 26.1 7.1 42 33-75 216-257 (310)
323 PF08450 SGL: SMP-30/Gluconola 88.7 3.9 8.4E-05 25.0 7.3 46 30-77 185-231 (246)
324 PF01436 NHL: NHL repeat; Int 88.2 1.2 2.5E-05 18.4 3.7 25 31-56 4-28 (28)
325 PF08553 VID27: VID27 cytoplas 88.0 2.3 5E-05 31.3 5.7 30 27-58 576-605 (794)
326 COG5354 Uncharacterized protei 86.9 1.3 2.8E-05 30.9 3.9 45 23-69 27-71 (561)
327 KOG1272|consensus 86.8 0.31 6.7E-06 33.6 0.9 66 3-75 232-297 (545)
328 KOG1912|consensus 86.4 0.56 1.2E-05 34.4 2.0 60 4-68 500-560 (1062)
329 PF00930 DPPIV_N: Dipeptidyl p 86.2 2.7 5.8E-05 27.4 5.0 50 7-64 27-76 (353)
330 KOG2377|consensus 86.1 3.8 8.1E-05 28.8 5.7 33 26-59 64-96 (657)
331 COG3386 Gluconolactonase [Carb 85.8 4.1 8.9E-05 26.5 5.6 39 20-59 154-193 (307)
332 PF01011 PQQ: PQQ enzyme repea 85.7 2.1 4.5E-05 18.8 4.7 28 42-70 2-29 (38)
333 PF13360 PQQ_2: PQQ-like domai 85.7 3.5 7.5E-05 24.7 5.1 30 39-69 35-64 (238)
334 KOG0882|consensus 85.6 0.18 3.9E-06 34.6 -0.6 42 20-62 45-87 (558)
335 PF14269 Arylsulfotran_2: Aryl 85.6 3.9 8.6E-05 26.4 5.5 39 31-70 146-184 (299)
336 PF08450 SGL: SMP-30/Gluconola 84.9 3.3 7.2E-05 25.3 4.7 31 28-59 133-164 (246)
337 PF13570 PQQ_3: PQQ-like domai 83.3 2.9 6.2E-05 18.4 3.1 20 40-60 21-40 (40)
338 PLN02919 haloacid dehalogenase 83.3 4.5 9.7E-05 30.7 5.5 32 32-64 807-838 (1057)
339 COG3490 Uncharacterized protei 83.2 8.9 0.00019 25.4 6.2 34 35-69 120-159 (366)
340 KOG2109|consensus 82.3 1.5 3.2E-05 31.7 2.6 37 20-56 307-343 (788)
341 TIGR03300 assembly_YfgL outer 81.6 5.4 0.00012 26.0 5.0 32 39-71 319-350 (377)
342 PF13360 PQQ_2: PQQ-like domai 81.0 5.4 0.00012 23.8 4.6 28 37-65 209-236 (238)
343 KOG2114|consensus 80.8 7.2 0.00016 29.1 5.6 52 3-56 93-152 (933)
344 PF10168 Nup88: Nuclear pore c 80.7 6.6 0.00014 28.6 5.4 35 26-61 144-181 (717)
345 KOG1275|consensus 80.1 7.4 0.00016 29.4 5.5 39 21-60 305-343 (1118)
346 TIGR03075 PQQ_enz_alc_DH PQQ-d 79.9 7.3 0.00016 27.2 5.3 31 39-70 471-501 (527)
347 TIGR02608 delta_60_rpt delta-6 79.1 4.8 0.0001 19.6 3.2 19 30-48 2-20 (55)
348 KOG2114|consensus 78.3 22 0.00049 26.7 7.4 47 20-68 206-252 (933)
349 KOG4714|consensus 78.3 3.7 8E-05 26.7 3.3 32 30-62 181-213 (319)
350 PF12234 Rav1p_C: RAVE protein 78.2 9.1 0.0002 27.6 5.4 48 4-57 53-102 (631)
351 KOG1008|consensus 78.2 0.55 1.2E-05 33.7 -0.4 38 23-61 97-139 (783)
352 PRK04043 tolB translocation pr 78.1 19 0.0004 24.4 7.9 35 30-65 189-227 (419)
353 COG2706 3-carboxymuconate cycl 77.9 14 0.00031 24.7 5.9 51 26-76 288-342 (346)
354 PF12768 Rax2: Cortical protei 77.9 8.9 0.00019 24.8 4.9 50 6-62 19-75 (281)
355 COG5170 CDC55 Serine/threonine 77.8 4.6 9.9E-05 27.0 3.6 32 27-59 25-56 (460)
356 KOG4640|consensus 76.5 8.7 0.00019 27.7 4.9 48 29-78 21-70 (665)
357 COG3490 Uncharacterized protei 73.9 13 0.00028 24.7 4.9 36 7-46 144-179 (366)
358 PF04762 IKI3: IKI3 family; I 73.8 17 0.00036 27.4 6.0 33 27-61 303-335 (928)
359 COG2706 3-carboxymuconate cycl 73.6 11 0.00025 25.1 4.6 33 31-63 147-179 (346)
360 PF07995 GSDH: Glucose / Sorbo 73.0 12 0.00027 24.4 4.8 29 31-62 4-32 (331)
361 PF10584 Proteasome_A_N: Prote 72.6 0.73 1.6E-05 18.5 -0.6 8 35-42 7-14 (23)
362 KOG2041|consensus 72.6 9.1 0.0002 28.5 4.3 31 29-60 15-45 (1189)
363 KOG4649|consensus 72.4 23 0.0005 23.3 5.7 35 33-68 98-132 (354)
364 PF15390 DUF4613: Domain of un 70.8 17 0.00037 26.3 5.2 33 26-59 153-186 (671)
365 TIGR03606 non_repeat_PQQ dehyd 69.1 21 0.00045 24.8 5.3 38 23-61 24-61 (454)
366 PF06433 Me-amine-dh_H: Methyl 69.1 32 0.00069 23.1 6.5 59 3-68 68-135 (342)
367 PF04053 Coatomer_WDAD: Coatom 69.0 35 0.00076 23.5 7.0 34 23-58 27-60 (443)
368 PF10647 Gmad1: Lipoprotein Lp 68.9 8.2 0.00018 24.2 3.2 18 30-47 113-130 (253)
369 PRK10115 protease 2; Provision 68.8 17 0.00038 26.3 5.1 33 30-63 128-165 (686)
370 COG3391 Uncharacterized conser 68.8 32 0.00068 22.9 8.0 43 30-73 117-162 (381)
371 KOG1832|consensus 67.9 1 2.3E-05 33.8 -1.0 50 7-68 1251-1300(1516)
372 COG3391 Uncharacterized conser 67.9 33 0.00072 22.8 7.6 43 20-64 152-195 (381)
373 PF08801 Nucleoporin_N: Nup133 66.6 20 0.00043 24.0 4.8 31 29-60 190-220 (422)
374 PF15390 DUF4613: Domain of un 65.4 34 0.00073 24.9 5.7 29 33-61 343-371 (671)
375 PF04841 Vps16_N: Vps16, N-ter 64.7 41 0.00089 22.8 6.1 29 29-59 81-109 (410)
376 PF10214 Rrn6: RNA polymerase 64.1 31 0.00066 25.4 5.6 38 20-58 134-175 (765)
377 PRK13616 lipoprotein LpqB; Pro 63.0 14 0.00029 26.4 3.6 26 28-55 447-472 (591)
378 COG0823 TolB Periplasmic compo 62.8 41 0.00089 23.0 5.8 31 33-63 286-318 (425)
379 PF06977 SdiA-regulated: SdiA- 61.9 38 0.00083 21.5 5.5 37 30-68 172-209 (248)
380 PRK02888 nitrous-oxide reducta 61.3 47 0.001 24.2 6.0 38 21-60 368-405 (635)
381 PF07865 DUF1652: Protein of u 60.4 22 0.00047 18.2 3.8 17 53-69 29-45 (69)
382 KOG2395|consensus 60.1 14 0.00031 26.3 3.3 27 30-58 432-458 (644)
383 KOG3630|consensus 59.8 37 0.00079 26.7 5.4 31 28-59 198-228 (1405)
384 cd00216 PQQ_DH Dehydrogenases 59.4 39 0.00085 23.3 5.3 30 39-69 405-434 (488)
385 KOG2444|consensus 58.1 23 0.00051 22.5 3.7 31 38-69 112-142 (238)
386 PRK11138 outer membrane biogen 57.9 38 0.00083 22.4 4.9 29 40-69 335-363 (394)
387 KOG3616|consensus 57.3 22 0.00047 27.0 3.8 32 30-62 16-47 (1636)
388 PF12341 DUF3639: Protein of u 56.9 15 0.00033 15.2 3.6 24 30-56 3-26 (27)
389 PF10168 Nup88: Nuclear pore c 56.8 51 0.0011 24.3 5.6 24 28-51 84-107 (717)
390 COG5436 Predicted integral mem 56.8 41 0.00089 20.2 4.4 38 2-45 67-105 (182)
391 COG1946 TesB Acyl-CoA thioeste 55.8 37 0.0008 22.3 4.4 25 31-56 261-285 (289)
392 PF05935 Arylsulfotrans: Aryls 55.4 51 0.0011 22.8 5.3 40 30-70 272-312 (477)
393 PF12234 Rav1p_C: RAVE protein 55.2 80 0.0017 23.1 6.7 50 28-78 29-80 (631)
394 PF03088 Str_synth: Strictosid 55.0 30 0.00064 18.5 3.4 18 30-47 58-75 (89)
395 TIGR03054 photo_alph_chp1 puta 55.0 40 0.00087 19.5 4.5 26 46-72 47-72 (135)
396 KOG2566|consensus 51.9 79 0.0017 22.0 6.7 50 28-78 462-516 (518)
397 PF12657 TFIIIC_delta: Transcr 51.8 48 0.001 19.5 4.7 29 30-59 87-121 (173)
398 TIGR03300 assembly_YfgL outer 50.7 68 0.0015 20.9 7.3 29 40-69 145-173 (377)
399 PF06739 SBBP: Beta-propeller 50.5 24 0.00051 15.5 3.6 22 29-50 13-34 (38)
400 PF14655 RAB3GAP2_N: Rab3 GTPa 49.9 22 0.00048 24.3 2.9 25 38-64 77-101 (415)
401 COG5167 VID27 Protein involved 49.1 41 0.00089 24.3 4.1 17 41-58 574-590 (776)
402 TIGR02171 Fb_sc_TIGR02171 Fibr 49.0 94 0.002 23.8 6.0 41 20-60 340-386 (912)
403 TIGR02604 Piru_Ver_Nterm putat 49.0 69 0.0015 21.1 5.0 19 29-47 124-142 (367)
404 COG2133 Glucose/sorbosone dehy 49.0 54 0.0012 22.5 4.5 18 32-49 180-197 (399)
405 PF12566 DUF3748: Protein of u 47.2 24 0.00051 20.0 2.3 23 33-56 72-94 (122)
406 PF14761 HPS3_N: Hermansky-Pud 46.2 62 0.0013 20.3 4.2 39 7-49 42-80 (215)
407 KOG2280|consensus 46.0 51 0.0011 24.6 4.2 49 29-78 217-267 (829)
408 KOG2727|consensus 46.0 21 0.00045 27.4 2.3 38 33-71 326-363 (1244)
409 PF10008 DUF2251: Uncharacteri 45.4 52 0.0011 18.0 4.2 34 26-60 52-85 (97)
410 KOG1983|consensus 45.4 41 0.00088 25.8 3.8 26 37-63 243-268 (993)
411 PRK10526 acyl-CoA thioesterase 45.3 21 0.00046 22.9 2.2 22 33-55 263-284 (286)
412 PF14870 PSII_BNR: Photosynthe 43.7 92 0.002 20.4 6.0 33 26-59 142-174 (302)
413 PF03646 FlaG: FlaG protein; 43.2 41 0.00088 18.1 2.8 17 53-69 70-86 (107)
414 KOG2479|consensus 43.2 46 0.00099 23.4 3.5 26 37-62 502-527 (549)
415 PF10395 Utp8: Utp8 family; I 42.5 72 0.0016 23.5 4.5 30 28-58 129-158 (670)
416 KOG1920|consensus 42.4 63 0.0014 25.5 4.4 29 26-55 107-135 (1265)
417 KOG2467|consensus 42.3 26 0.00056 24.1 2.2 21 39-60 340-360 (477)
418 PF07250 Glyoxal_oxid_N: Glyox 42.1 78 0.0017 20.1 4.3 34 33-69 174-207 (243)
419 PRK08868 flagellar protein Fla 41.6 34 0.00073 20.1 2.4 18 52-69 103-120 (144)
420 KOG4460|consensus 41.6 42 0.00092 24.3 3.2 35 30-65 167-204 (741)
421 KOG1008|consensus 40.7 13 0.00028 27.2 0.7 51 7-59 133-184 (783)
422 PF08553 VID27: VID27 cytoplas 40.5 90 0.002 23.5 4.8 37 20-58 610-646 (794)
423 PF00780 CNH: CNH domain; Int 40.3 89 0.0019 19.3 5.3 28 41-70 239-266 (275)
424 cd03444 Thioesterase_II_repeat 39.2 64 0.0014 17.3 3.9 13 35-47 87-99 (104)
425 KOG1900|consensus 39.0 66 0.0014 25.5 4.1 34 26-60 240-273 (1311)
426 COG4831 Roadblock/LC7 domain [ 38.7 38 0.00083 18.6 2.2 20 28-47 12-31 (109)
427 COG4247 Phy 3-phytase (myo-ino 38.5 1.2E+02 0.0025 20.1 4.6 41 28-70 55-95 (364)
428 TIGR03074 PQQ_membr_DH membran 38.2 98 0.0021 23.1 4.7 30 39-69 690-720 (764)
429 PF02870 Methyltransf_1N: 6-O- 37.6 27 0.00059 17.4 1.5 21 36-57 8-28 (77)
430 PF02879 PGM_PMM_II: Phosphogl 37.4 50 0.0011 17.4 2.6 19 32-50 86-104 (104)
431 PF08309 LVIVD: LVIVD repeat; 37.1 46 0.001 15.1 3.3 21 40-61 11-31 (42)
432 KOG4460|consensus 37.0 1.4E+02 0.003 21.8 5.1 22 30-51 105-126 (741)
433 PRK08452 flagellar protein Fla 36.8 47 0.001 18.9 2.5 18 52-69 85-102 (124)
434 PF13449 Phytase-like: Esteras 36.4 73 0.0016 20.7 3.7 33 33-67 89-127 (326)
435 PRK07738 flagellar protein Fla 36.3 49 0.0011 18.7 2.5 18 52-69 78-95 (117)
436 PF08149 BING4CT: BING4CT (NUC 35.7 72 0.0016 16.8 3.3 29 27-56 8-36 (80)
437 cd01272 FE65_N Fe65 Phosphotyr 35.6 93 0.002 18.1 4.0 30 39-69 51-80 (138)
438 PF10636 hemP: Hemin uptake pr 35.5 39 0.00085 15.2 1.6 20 26-45 18-37 (38)
439 PF11090 DUF2833: Protein of u 34.7 68 0.0015 17.2 2.7 27 33-61 2-28 (86)
440 PF09142 TruB_C: tRNA Pseudour 33.7 47 0.001 16.0 1.9 17 33-49 29-45 (56)
441 COG4703 Uncharacterized protei 32.4 62 0.0013 16.7 2.2 25 19-43 22-46 (74)
442 PF05096 Glu_cyclase_2: Glutam 31.6 1.5E+02 0.0032 19.2 5.8 53 7-68 114-166 (264)
443 PF14727 PHTB1_N: PTHB1 N-term 31.3 76 0.0017 21.9 3.2 22 39-61 36-57 (418)
444 cd01211 GAPCenA GAPCenA Phosph 31.1 86 0.0019 18.0 2.9 21 47-68 48-68 (125)
445 TIGR00189 tesB acyl-CoA thioes 30.0 79 0.0017 19.7 3.0 13 36-48 254-266 (271)
446 KOG3617|consensus 29.5 23 0.00049 27.1 0.5 46 32-78 63-109 (1416)
447 KOG0183|consensus 28.7 37 0.00079 21.5 1.2 10 35-44 10-19 (249)
448 smart00135 LY Low-density lipo 27.8 60 0.0013 13.5 5.4 31 29-59 9-39 (43)
449 TIGR03074 PQQ_membr_DH membran 27.7 1.5E+02 0.0032 22.2 4.2 29 39-68 455-486 (764)
450 PF15644 Tox-PL: Papain fold t 27.7 1.1E+02 0.0023 16.7 2.9 22 40-62 88-109 (111)
451 TIGR03118 PEPCTERM_chp_1 conse 27.6 2E+02 0.0043 19.4 6.9 37 32-69 247-289 (336)
452 PF13983 YsaB: YsaB-like lipop 27.4 50 0.0011 17.0 1.4 12 33-44 62-73 (77)
453 TIGR03032 conserved hypothetic 27.2 2E+02 0.0044 19.4 6.2 30 39-69 212-243 (335)
454 PF08596 Lgl_C: Lethal giant l 27.0 1.5E+02 0.0033 20.1 4.0 28 30-58 3-30 (395)
455 KOG3611|consensus 26.6 1.3E+02 0.0029 22.4 3.9 33 21-55 457-489 (737)
456 smart00415 HSF heat shock fact 26.5 78 0.0017 17.1 2.2 15 33-47 21-35 (105)
457 KOG4379|consensus 26.5 2.1E+02 0.0046 20.5 4.6 45 3-47 213-261 (596)
458 PF09826 Beta_propel: Beta pro 26.4 1.8E+02 0.004 20.6 4.4 20 39-60 21-40 (521)
459 cd05805 MPG1_transferase GTP-m 25.8 1.3E+02 0.0029 20.4 3.6 20 32-51 231-250 (441)
460 PF00843 Arena_nucleocap: Aren 25.6 18 0.00038 25.3 -0.5 18 46-64 148-165 (533)
461 PF11635 Med16: Mediator compl 24.8 2.2E+02 0.0048 21.2 4.7 39 28-67 259-297 (753)
462 PRK10183 hypothetical protein; 24.7 1E+02 0.0022 15.1 2.3 20 26-45 36-55 (56)
463 PF11010 DUF2848: Protein of u 24.2 1.9E+02 0.004 18.0 4.6 32 20-51 45-77 (194)
464 COG3211 PhoX Predicted phospha 22.8 1.1E+02 0.0023 22.4 2.7 20 27-46 552-571 (616)
465 KOG2006|consensus 22.7 1.6E+02 0.0034 23.0 3.7 28 24-51 336-363 (1023)
466 PF00447 HSF_DNA-bind: HSF-typ 22.6 75 0.0016 16.9 1.7 13 33-45 18-30 (103)
467 PF13964 Kelch_6: Kelch motif 22.5 93 0.002 13.9 2.4 23 39-62 11-39 (50)
468 PF13860 FlgD_ig: FlgD Ig-like 22.4 1.2E+02 0.0027 15.3 2.4 15 53-68 29-43 (81)
469 KOG0084|consensus 22.2 56 0.0012 20.3 1.2 12 2-14 58-69 (205)
470 PF02055 Glyco_hydro_30: O-Gly 22.1 3E+02 0.0064 19.5 5.0 19 28-46 438-457 (496)
471 PF14779 BBS1: Ciliary BBSome 21.9 2.3E+02 0.0051 18.3 4.6 34 41-75 196-229 (257)
472 KOG4305|consensus 21.9 1.5E+02 0.0032 23.2 3.4 27 42-70 964-990 (1029)
473 COG5169 HSF1 Heat shock transc 21.6 92 0.002 20.4 2.1 18 33-50 29-46 (282)
474 COG5497 Predicted secreted pro 21.5 78 0.0017 20.0 1.7 16 31-46 24-39 (228)
475 cd03084 phosphohexomutase The 21.4 1.5E+02 0.0032 19.5 3.1 20 32-51 177-196 (355)
476 PF05907 DUF866: Eukaryotic pr 21.3 1.9E+02 0.0042 17.1 5.6 30 31-60 105-134 (161)
477 COG4246 Uncharacterized protei 21.2 1.1E+02 0.0025 20.2 2.4 24 28-51 73-96 (340)
478 PF09309 FCP1_C: FCP1, C-termi 21.2 32 0.00069 22.0 0.0 16 53-68 56-71 (263)
479 PF14567 SUKH_5: SMI1-KNR4 cel 21.0 1.2E+02 0.0026 17.5 2.3 27 34-62 88-114 (132)
480 PF10433 MMS1_N: Mono-function 20.7 1.9E+02 0.0041 20.0 3.6 28 32-60 47-74 (504)
481 KOG2280|consensus 20.7 2.2E+02 0.0048 21.6 4.0 38 20-59 75-112 (829)
No 1
>KOG0271|consensus
Probab=99.58 E-value=4.9e-15 Score=95.89 Aligned_cols=69 Identities=30% Similarity=0.489 Sum_probs=62.7
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEE-EEeeCCCCCeE-EeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQL-VELRRGSDPAT-LYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~-~~~~~~~~~~~-~~w 78 (78)
.+. +||+.... +.++..+|.+.|.||+|+|||+.||+|+.||+ |++||..+|+++ ..+++|.+.++ |+|
T Consensus 138 TvR-~WD~~TeT-----p~~t~KgH~~WVlcvawsPDgk~iASG~~dg~-I~lwdpktg~~~g~~l~gH~K~It~Law 208 (480)
T KOG0271|consen 138 TVR-LWDLDTET-----PLFTCKGHKNWVLCVAWSPDGKKIASGSKDGS-IRLWDPKTGQQIGRALRGHKKWITALAW 208 (480)
T ss_pred eEE-eeccCCCC-----cceeecCCccEEEEEEECCCcchhhccccCCe-EEEecCCCCCcccccccCcccceeEEee
Confidence 356 89998877 89999999999999999999999999999999 999999998766 88899999887 777
No 2
>KOG0272|consensus
Probab=99.56 E-value=6e-15 Score=95.97 Aligned_cols=63 Identities=25% Similarity=0.375 Sum_probs=59.8
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
|||++++. ++..|.+|..+|.+|+|+|+|..||||+.|++ ++|||++..+.++.+++|.+-++
T Consensus 329 vWDlRtgr-----~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt-~kVWDLR~r~~ly~ipAH~nlVS 391 (459)
T KOG0272|consen 329 VWDLRTGR-----CIMFLAGHIKEILSVAFSPNGYHLATGSSDNT-CKVWDLRMRSELYTIPAHSNLVS 391 (459)
T ss_pred eeecccCc-----EEEEecccccceeeEeECCCceEEeecCCCCc-EEEeeecccccceecccccchhh
Confidence 89999987 99999999999999999999999999999999 99999999999999999987654
No 3
>KOG0263|consensus
Probab=99.55 E-value=1.3e-14 Score=99.14 Aligned_cols=65 Identities=20% Similarity=0.388 Sum_probs=60.9
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
|++ +||+.++. .++.|.||.++|.+++|||+|.+|++|++|+. |.+||+.+|+.+..+.+|.+.+
T Consensus 558 tVR-lWDv~~G~-----~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~-I~iWDl~~~~~v~~l~~Ht~ti 622 (707)
T KOG0263|consen 558 TVR-LWDVSTGN-----SVRIFTGHKGPVTALAFSPCGRYLASGDEDGL-IKIWDLANGSLVKQLKGHTGTI 622 (707)
T ss_pred eEE-EEEcCCCc-----EEEEecCCCCceEEEEEcCCCceEeecccCCc-EEEEEcCCCcchhhhhcccCce
Confidence 688 99999987 89999999999999999999999999999999 9999999999999999886554
No 4
>KOG2110|consensus
Probab=99.49 E-value=2.8e-13 Score=87.12 Aligned_cols=68 Identities=43% Similarity=0.621 Sum_probs=62.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEe
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLY 77 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~ 77 (78)
+. +||+.+.. ...++.+|++++-+++|+++|++|||+|+.|++||||.+.+|..+.+|+++..+++++
T Consensus 155 V~-l~d~~nl~-----~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~Iy 222 (391)
T KOG2110|consen 155 VV-LFDTINLQ-----PVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIY 222 (391)
T ss_pred EE-EEEcccce-----eeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEE
Confidence 45 88988876 8889999999999999999999999999999999999999999999999998888764
No 5
>KOG0266|consensus
Probab=99.48 E-value=3.8e-13 Score=89.36 Aligned_cols=67 Identities=24% Similarity=0.417 Sum_probs=60.8
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+. +||+.... .+++++.+|...|++++|+|+|+.+++|+.|++ |+|||++++++...+.+|.++++.
T Consensus 227 ir-iwd~~~~~----~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~t-vriWd~~~~~~~~~l~~hs~~is~ 293 (456)
T KOG0266|consen 227 LR-IWDLKDDG----RNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGT-VRIWDVRTGECVRKLKGHSDGISG 293 (456)
T ss_pred EE-EeeccCCC----eEEEEecCCCCceEEEEecCCCCEEEEecCCCc-EEEEeccCCeEEEeeeccCCceEE
Confidence 56 89994432 489999999999999999999999999999999 999999999999999999998874
No 6
>KOG0273|consensus
Probab=99.47 E-value=2.7e-13 Score=89.40 Aligned_cols=69 Identities=20% Similarity=0.326 Sum_probs=63.9
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
.+. +||+..+. ++++|..|+.+|++++|||+|+++|+|+.||. |.+|++++++..+.+.+......|||
T Consensus 433 tV~-lwdv~~gv-----~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~-V~iws~~~~~l~~s~~~~~~Ifel~W 501 (524)
T KOG0273|consen 433 TVK-LWDVESGV-----PIHTLMKHQEPVYSVAFSPNGRYLASGSLDGC-VHIWSTKTGKLVKSYQGTGGIFELCW 501 (524)
T ss_pred eEE-EEEccCCc-----eeEeeccCCCceEEEEecCCCcEEEecCCCCe-eEeccccchheeEeecCCCeEEEEEE
Confidence 356 89998886 99999999999999999999999999999999 99999999999999998877778888
No 7
>KOG0269|consensus
Probab=99.38 E-value=1.2e-12 Score=90.16 Aligned_cols=70 Identities=20% Similarity=0.403 Sum_probs=58.0
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc--EEEEeeCCCCCeEEeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKV--QLVELRRGSDPATLYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~--~~~~~~~~~~~~~~~w 78 (78)
||| +||+|+.. ++...+.+|.++|.|+.|+|++.+||||++|+. |+|||+.+++ ...++....--.+++|
T Consensus 200 ~lq-lWDlRqp~----r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~-vkiWd~t~~~~~~~~tInTiapv~rVkW 271 (839)
T KOG0269|consen 200 YLQ-LWDLRQPD----RCEKKLTAHNGPVLCLNWHPNREWLATGGRDKM-VKIWDMTDSRAKPKHTINTIAPVGRVKW 271 (839)
T ss_pred eEE-EeeccCch----hHHHHhhcccCceEEEeecCCCceeeecCCCcc-EEEEeccCCCccceeEEeecceeeeeee
Confidence 799 99999987 688889999999999999999999999999999 9999988653 4455554433344666
No 8
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.38 E-value=1.4e-12 Score=59.53 Aligned_cols=38 Identities=39% Similarity=0.685 Sum_probs=36.0
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEee
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWD 57 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d 57 (78)
++.+++++|.++|++++|+|++++|++++.|+. |++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~-i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGT-IRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSE-EEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCE-EEEEC
Confidence 367889999999999999999999999999999 99997
No 9
>KOG0295|consensus
Probab=99.36 E-value=4.8e-12 Score=81.53 Aligned_cols=65 Identities=22% Similarity=0.287 Sum_probs=58.7
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
++ +||+..+- ++.++.+|.+.|..++|+|.|++|+++.+|++ +|+||+++++|..+++.|..-++
T Consensus 316 Ik-~wdv~tg~-----cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDkt-lrvwdl~~~~cmk~~~ah~hfvt 380 (406)
T KOG0295|consen 316 IK-IWDVSTGM-----CLFTLVGHDNWVRGVAFSPGGKYILSCADDKT-LRVWDLKNLQCMKTLEAHEHFVT 380 (406)
T ss_pred EE-EEeccCCe-----EEEEEecccceeeeeEEcCCCeEEEEEecCCc-EEEEEeccceeeeccCCCcceeE
Confidence 46 89998775 99999999999999999999999999999999 99999999999999987755443
No 10
>KOG2111|consensus
Probab=99.33 E-value=1.7e-11 Score=77.86 Aligned_cols=70 Identities=56% Similarity=0.826 Sum_probs=61.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEe
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLY 77 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~ 77 (78)
+| |.|+...... ....+.+|.+.|.|++.+.+|+.+||+|..|+.|||||..+|..+.+++++.+.+.++
T Consensus 161 vQ-i~dL~~~~~~---~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy 230 (346)
T KOG2111|consen 161 VQ-IVDLASTKPN---APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIY 230 (346)
T ss_pred EE-EEEhhhcCcC---CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEE
Confidence 57 7888776522 4677899999999999999999999999999999999999999999999988887753
No 11
>PTZ00421 coronin; Provisional
Probab=99.33 E-value=1.5e-11 Score=82.68 Aligned_cols=63 Identities=14% Similarity=0.278 Sum_probs=56.2
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
++ |||+.+.. ....+.+|.+.|.+++|+|+|+.|++++.|+. |++||++++..+..+.+|...
T Consensus 150 Vr-IWDl~tg~-----~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~-IrIwD~rsg~~v~tl~~H~~~ 212 (493)
T PTZ00421 150 VN-VWDVERGK-----AVEVIKCHSDQITSLEWNLDGSLLCTTSKDKK-LNIIDPRDGTIVSSVEAHASA 212 (493)
T ss_pred EE-EEECCCCe-----EEEEEcCCCCceEEEEEECCCCEEEEecCCCE-EEEEECCCCcEEEEEecCCCC
Confidence 56 99998765 77888999999999999999999999999999 999999999998888877543
No 12
>KOG0272|consensus
Probab=99.31 E-value=2e-12 Score=84.43 Aligned_cols=62 Identities=19% Similarity=0.230 Sum_probs=57.0
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
+||+.+.. ......||..+|.+++|.|||..++||+.|.. -||||+++|+++..+.+|.+++
T Consensus 287 lWD~~tk~-----ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~-~RvWDlRtgr~im~L~gH~k~I 348 (459)
T KOG0272|consen 287 LWDLETKS-----ELLLQEGHSKGVFSIAFQPDGSLAATGGLDSL-GRVWDLRTGRCIMFLAGHIKEI 348 (459)
T ss_pred hcccccch-----hhHhhcccccccceeEecCCCceeeccCccch-hheeecccCcEEEEecccccce
Confidence 78888776 77777899999999999999999999999999 9999999999999999987775
No 13
>KOG0315|consensus
Probab=99.31 E-value=1.3e-11 Score=76.66 Aligned_cols=66 Identities=20% Similarity=0.383 Sum_probs=56.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+. +||+.++.+. ++.+|.+|.+-|.+|.|..||+.++||++||+ ++|||+++-.+-+.++.. .|++
T Consensus 63 vR-lyD~~S~np~---Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt-~kIWdlR~~~~qR~~~~~-spVn 128 (311)
T KOG0315|consen 63 VR-LYDLNSNNPN---PVATFEGHTKNVTAVGFQCDGRWMYTGSEDGT-VKIWDLRSLSCQRNYQHN-SPVN 128 (311)
T ss_pred eE-EEEccCCCCC---ceeEEeccCCceEEEEEeecCeEEEecCCCce-EEEEeccCcccchhccCC-CCcc
Confidence 56 8999988743 89999999999999999999999999999999 999999997776666654 4444
No 14
>KOG0271|consensus
Probab=99.31 E-value=3.1e-12 Score=83.13 Aligned_cols=59 Identities=20% Similarity=0.387 Sum_probs=53.9
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
+++..+.+|+..|+.+.||||++++|+++.|++ |++||.++|+.+..|++|-+++= +.|
T Consensus 358 kpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkS-VkLW~g~tGk~lasfRGHv~~VYqvaw 417 (480)
T KOG0271|consen 358 KPITRMTGHQALVNHVSFSPDGRYIASASFDKS-VKLWDGRTGKFLASFRGHVAAVYQVAW 417 (480)
T ss_pred cchhhhhchhhheeeEEECCCccEEEEeecccc-eeeeeCCCcchhhhhhhccceeEEEEe
Confidence 577778899999999999999999999999999 99999999999999999987763 665
No 15
>KOG0286|consensus
Probab=99.29 E-value=1.4e-11 Score=77.81 Aligned_cols=60 Identities=22% Similarity=0.308 Sum_probs=55.4
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
.. +||++... +.++|.+|..-|++|.|-|+|..+++|++|++ +|+||++....+..+++.
T Consensus 211 ak-lWD~R~~~-----c~qtF~ghesDINsv~ffP~G~afatGSDD~t-cRlyDlRaD~~~a~ys~~ 270 (343)
T KOG0286|consen 211 AK-LWDVRSGQ-----CVQTFEGHESDINSVRFFPSGDAFATGSDDAT-CRLYDLRADQELAVYSHD 270 (343)
T ss_pred ee-eeeccCcc-----eeEeecccccccceEEEccCCCeeeecCCCce-eEEEeecCCcEEeeeccC
Confidence 45 99999987 99999999999999999999999999999999 999999998888888743
No 16
>KOG0264|consensus
Probab=99.29 E-value=1.9e-11 Score=79.89 Aligned_cols=71 Identities=27% Similarity=0.455 Sum_probs=58.8
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCC-CcEEEEeeCCCCCeE-EeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLK-KVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~-~~~~~~~~~~~~~~~-~~w 78 (78)
+|. |||+|+. ..++.+...+|.++|+|++|+| ++..|||||.|++ |.+||+|+ ..+++.+++|.+.+- +-|
T Consensus 251 ~L~-iwD~R~~---~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~t-V~LwDlRnL~~~lh~~e~H~dev~~V~W 324 (422)
T KOG0264|consen 251 KLM-IWDTRSN---TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKT-VALWDLRNLNKPLHTFEGHEDEVFQVEW 324 (422)
T ss_pred eEE-EEEcCCC---CCCCcccccccCCceeEEEeCCCCCceEEeccCCCc-EEEeechhcccCceeccCCCcceEEEEe
Confidence 567 9999973 2358888899999999999999 6788999999999 99999997 467888888876643 544
No 17
>KOG0286|consensus
Probab=99.28 E-value=2.1e-11 Score=77.01 Aligned_cols=63 Identities=11% Similarity=0.282 Sum_probs=59.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+||+.++. ....|.+|.+-|.+++++| +++.+++|+.|+. .++||++.+.+.+.|++|..-++
T Consensus 170 lWDie~g~-----~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~-aklWD~R~~~c~qtF~ghesDIN 233 (343)
T KOG0286|consen 170 LWDIETGQ-----QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKS-AKLWDVRSGQCVQTFEGHESDIN 233 (343)
T ss_pred EEEcccce-----EEEEecCCcccEEEEecCCCCCCeEEecccccc-eeeeeccCcceeEeecccccccc
Confidence 89999886 8999999999999999999 9999999999999 99999999999999999876654
No 18
>KOG0291|consensus
Probab=99.23 E-value=6.2e-11 Score=81.95 Aligned_cols=63 Identities=22% Similarity=0.401 Sum_probs=57.8
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+|+.+... .+..-++|...++++++||||.++|||++||. |+|||..+|-|..+|..|...++
T Consensus 334 VweWqsEs-----YVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgK-VKvWn~~SgfC~vTFteHts~Vt 396 (893)
T KOG0291|consen 334 VWEWQSES-----YVLKQQGHSDRITSLAYSPDGQLIATGAEDGK-VKVWNTQSGFCFVTFTEHTSGVT 396 (893)
T ss_pred EEEeeccc-----eeeeccccccceeeEEECCCCcEEEeccCCCc-EEEEeccCceEEEEeccCCCceE
Confidence 78877765 77777899999999999999999999999999 99999999999999999888776
No 19
>KOG0279|consensus
Probab=99.22 E-value=6.5e-11 Score=74.33 Aligned_cols=66 Identities=17% Similarity=0.265 Sum_probs=57.7
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
++ +||+++.+ ..+++.+|++.++.+++||||...++|++||. +.+||++.++.++.+++......|
T Consensus 174 vK-vWnl~~~~-----l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~-~~LwdL~~~k~lysl~a~~~v~sl 239 (315)
T KOG0279|consen 174 VK-VWNLRNCQ-----LRTTFIGHSGYVNTVTVSPDGSLCASGGKDGE-AMLWDLNEGKNLYSLEAFDIVNSL 239 (315)
T ss_pred EE-EEccCCcc-----hhhccccccccEEEEEECCCCCEEecCCCCce-EEEEEccCCceeEeccCCCeEeeE
Confidence 56 89998876 88899999999999999999999999999999 999999999998888765433334
No 20
>KOG0266|consensus
Probab=99.21 E-value=1.1e-10 Score=77.70 Aligned_cols=63 Identities=27% Similarity=0.431 Sum_probs=56.3
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc--EEEEeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKV--QLVELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~--~~~~~~~~~~~ 73 (78)
+. +||++..+ +..++.+|+++|++++|+++|+.|++++.|+. |++||+.++. ++..+.++..+
T Consensus 270 vr-iWd~~~~~-----~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~-i~vwd~~~~~~~~~~~~~~~~~~ 334 (456)
T KOG0266|consen 270 VR-IWDVRTGE-----CVRKLKGHSDGISGLAFSPDGNLLVSASYDGT-IRVWDLETGSKLCLKLLSGAENS 334 (456)
T ss_pred EE-EEeccCCe-----EEEeeeccCCceEEEEECCCCCEEEEcCCCcc-EEEEECCCCceeeeecccCCCCC
Confidence 45 99999865 99999999999999999999999999999999 9999999999 56777766555
No 21
>KOG0282|consensus
Probab=99.19 E-value=2.9e-11 Score=79.96 Aligned_cols=65 Identities=18% Similarity=0.269 Sum_probs=57.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
+. ||+++... +++++|.+|..+|..++|+++|+.+.+++.|+. +++||+++|.++..+....-+.
T Consensus 239 vk-lW~vy~~~----~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~-lKlwDtETG~~~~~f~~~~~~~ 303 (503)
T KOG0282|consen 239 VK-LWNVYDDR----RCLRTFKGHRKPVRDASFNNCGTSFLSASFDRF-LKLWDTETGQVLSRFHLDKVPT 303 (503)
T ss_pred EE-EEEEecCc----ceehhhhcchhhhhhhhccccCCeeeeeeccee-eeeeccccceEEEEEecCCCce
Confidence 45 89998833 599999999999999999999999999999999 9999999999999887655443
No 22
>PTZ00421 coronin; Provisional
Probab=99.17 E-value=5.6e-10 Score=75.20 Aligned_cols=73 Identities=19% Similarity=0.391 Sum_probs=59.0
Q ss_pred eeeEEEcccCCc--CCCCCcEEecCCccCEEEEEECCCC-CEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 4 LQCSQDLSSTEL--SSSSSPVTINAHQSELACLALNQTG-TMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 4 ~~~i~d~~~~~~--~~~~~~~~~~~h~~~i~~v~fs~dg-~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
+. +||+..... .....+.++.+|...|.+++|+|++ +.|++++.|+. |++||++++..+..+..|.+.+. +.|
T Consensus 100 Ik-IWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt-VrIWDl~tg~~~~~l~~h~~~V~sla~ 176 (493)
T PTZ00421 100 IM-GWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV-VNVWDVERGKAVEVIKCHSDQITSLEW 176 (493)
T ss_pred EE-EEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE-EEEEECCCCeEEEEEcCCCCceEEEEE
Confidence 45 899875431 1224677899999999999999986 69999999999 99999999999999988877665 554
No 23
>KOG0319|consensus
Probab=99.16 E-value=1.2e-10 Score=80.09 Aligned_cols=64 Identities=16% Similarity=0.301 Sum_probs=58.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
++ ||++.+.. ...++.+|+-.|.+|.|+|..+.++|+|.|++ |+||.+.+.+|+.++++|...+
T Consensus 487 aK-iW~le~~~-----l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~T-vKIW~is~fSClkT~eGH~~aV 550 (775)
T KOG0319|consen 487 AK-IWDLEQLR-----LLGVLSGHTRGVWCVSFSKNDQLLATCSGDKT-VKIWSISTFSCLKTFEGHTSAV 550 (775)
T ss_pred ee-eecccCce-----EEEEeeCCccceEEEEeccccceeEeccCCce-EEEEEeccceeeeeecCcccee
Confidence 45 89988665 99999999999999999999999999999999 9999999999999999987553
No 24
>KOG0284|consensus
Probab=99.14 E-value=2.2e-11 Score=79.44 Aligned_cols=68 Identities=22% Similarity=0.355 Sum_probs=60.9
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
++ +||-++++ |+.++.+|++.|..+.|+|+|++|+|+|+|.. ++++|+++-+.++.+++|.+-++ +.|
T Consensus 246 VK-lWDprSg~-----cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~-~kv~DiR~mkEl~~~r~Hkkdv~~~~W 314 (464)
T KOG0284|consen 246 VK-LWDPRSGS-----CLATLHGHKNTVLAVKFNPNGNWLLTGSKDQS-CKVFDIRTMKELFTYRGHKKDVTSLTW 314 (464)
T ss_pred eE-eecCCCcc-----hhhhhhhccceEEEEEEcCCCCeeEEccCCce-EEEEehhHhHHHHHhhcchhhheeecc
Confidence 56 89999887 99999999999999999999999999999999 99999998788888898876654 555
No 25
>KOG0289|consensus
Probab=99.13 E-value=1.6e-10 Score=76.04 Aligned_cols=58 Identities=21% Similarity=0.449 Sum_probs=51.0
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
+. +||+.+.. .+..|++|.++|.+|+|+.+|.+|+++.+|+. |++||+|.-+...++.
T Consensus 371 vk-iwdlks~~-----~~a~Fpght~~vk~i~FsENGY~Lat~add~~-V~lwDLRKl~n~kt~~ 428 (506)
T KOG0289|consen 371 VK-IWDLKSQT-----NVAKFPGHTGPVKAISFSENGYWLATAADDGS-VKLWDLRKLKNFKTIQ 428 (506)
T ss_pred EE-EEEcCCcc-----ccccCCCCCCceeEEEeccCceEEEEEecCCe-EEEEEehhhcccceee
Confidence 45 89998876 88899999999999999999999999999999 9999999766555544
No 26
>KOG1407|consensus
Probab=99.12 E-value=2.3e-10 Score=71.55 Aligned_cols=66 Identities=18% Similarity=0.205 Sum_probs=61.8
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
+||+...- |.++|..+.-||..++||.||++||++|+|.. |-|=++.+|..+.+++......++.|
T Consensus 215 LWD~~ELi-----C~R~isRldwpVRTlSFS~dg~~lASaSEDh~-IDIA~vetGd~~~eI~~~~~t~tVAW 280 (313)
T KOG1407|consen 215 LWDVDELI-----CERCISRLDWPVRTLSFSHDGRMLASASEDHF-IDIAEVETGDRVWEIPCEGPTFTVAW 280 (313)
T ss_pred ccChhHhh-----hheeeccccCceEEEEeccCcceeeccCccce-EEeEecccCCeEEEeeccCCceeEEe
Confidence 89998887 99999999999999999999999999999999 99999999999999998777777887
No 27
>PTZ00420 coronin; Provisional
Probab=99.12 E-value=9.5e-10 Score=75.13 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=53.0
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
++ +||+++.. ....+. |...|.+++|+|+|+.|++++.|+. |++||++++..+.++.+|...
T Consensus 150 Ir-IWDl~tg~-----~~~~i~-~~~~V~SlswspdG~lLat~s~D~~-IrIwD~Rsg~~i~tl~gH~g~ 211 (568)
T PTZ00420 150 VN-IWDIENEK-----RAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKH-MHIIDPRKQEIASSFHIHDGG 211 (568)
T ss_pred EE-EEECCCCc-----EEEEEe-cCCcEEEEEECCCCCEEEEEecCCE-EEEEECCCCcEEEEEecccCC
Confidence 56 89998765 555564 5678999999999999999999999 999999999999999887654
No 28
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.11 E-value=9e-10 Score=77.21 Aligned_cols=62 Identities=15% Similarity=0.392 Sum_probs=53.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQLVELRRGSD 72 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~ 72 (78)
+. +||+.+.. ....+.+|.+.|.+++|+| ++++|++++.|+. |++||++++..+..+..+..
T Consensus 557 v~-lWd~~~~~-----~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~-v~iWd~~~~~~~~~~~~~~~ 619 (793)
T PLN00181 557 VQ-VWDVARSQ-----LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGS-VKLWSINQGVSIGTIKTKAN 619 (793)
T ss_pred EE-EEECCCCe-----EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCE-EEEEECCCCcEEEEEecCCC
Confidence 56 89987654 7788899999999999997 8899999999999 99999999988887775543
No 29
>KOG1273|consensus
Probab=99.11 E-value=2.9e-10 Score=72.78 Aligned_cols=58 Identities=24% Similarity=0.387 Sum_probs=53.3
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
|||..+.. ..+++.+|--||.|++||+||+.|+|+|.|.. |.+||+..|.+++.++-.
T Consensus 49 I~D~~T~~-----iar~lsaH~~pi~sl~WS~dgr~LltsS~D~s-i~lwDl~~gs~l~rirf~ 106 (405)
T KOG1273|consen 49 IYDFDTFR-----IARMLSAHVRPITSLCWSRDGRKLLTSSRDWS-IKLWDLLKGSPLKRIRFD 106 (405)
T ss_pred EEEccccc-----hhhhhhccccceeEEEecCCCCEeeeecCCce-eEEEeccCCCceeEEEcc
Confidence 89988876 88889999999999999999999999999999 999999999988888743
No 30
>KOG0316|consensus
Probab=99.10 E-value=2.8e-10 Score=70.55 Aligned_cols=62 Identities=18% Similarity=0.387 Sum_probs=53.4
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC--cEEEEeeCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK--VQLVELRRGSD 72 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~--~~~~~~~~~~~ 72 (78)
+| +||+.++. ..+.|++|.+.|+.|+|+.+.+.+++|+.|.+ +|+||.++. ++++.+....+
T Consensus 83 v~-vwDV~TGk-----v~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s-~r~wDCRS~s~ePiQildea~D 146 (307)
T KOG0316|consen 83 VQ-VWDVNTGK-----VDRRFRGHLAQVNTVRFNEESSVVASGSFDSS-VRLWDCRSRSFEPIQILDEAKD 146 (307)
T ss_pred EE-EEEcccCe-----eeeecccccceeeEEEecCcceEEEeccccce-eEEEEcccCCCCccchhhhhcC
Confidence 57 99998886 99999999999999999999999999999999 999999976 45565554433
No 31
>KOG0318|consensus
Probab=99.10 E-value=8.6e-10 Score=74.00 Aligned_cols=60 Identities=23% Similarity=0.317 Sum_probs=52.0
Q ss_pred EEEcccCCcCCCCCcEEec---CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTIN---AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSD 72 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~---~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~ 72 (78)
+||-.+++ .+..|. +|++.|.+++|+||++.++|++.|.+ ++|||+.+++++.++..+..
T Consensus 216 iyDGktge-----~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt-~KIWdVs~~slv~t~~~~~~ 278 (603)
T KOG0318|consen 216 IYDGKTGE-----KVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKT-IKIWDVSTNSLVSTWPMGST 278 (603)
T ss_pred EEcCCCcc-----EEEEecCCCCccccEEEEEECCCCceEEEecCCce-EEEEEeeccceEEEeecCCc
Confidence 56655555 666676 89999999999999999999999999 99999999999999986544
No 32
>KOG0302|consensus
Probab=99.09 E-value=7.8e-10 Score=71.89 Aligned_cols=71 Identities=21% Similarity=0.472 Sum_probs=59.1
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC---CcEEEEeeCCCCCeE-EeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK---KVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~---~~~~~~~~~~~~~~~-~~w 78 (78)
++. |||+|+... +......+|.+-|+.|+||..-.+||+|+.||+ ++|||++. +.++..|..|..|++ +.|
T Consensus 281 sIr-IWDiRs~~~---~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt-~~iwDLR~~~~~~pVA~fk~Hk~pItsieW 355 (440)
T KOG0302|consen 281 SIR-IWDIRSGPK---KAAVSTKAHNSDVNVISWNRREPLLASGGDDGT-LSIWDLRQFKSGQPVATFKYHKAPITSIEW 355 (440)
T ss_pred eEE-EEEecCCCc---cceeEeeccCCceeeEEccCCcceeeecCCCce-EEEEEhhhccCCCcceeEEeccCCeeEEEe
Confidence 456 999998741 233334799999999999998889999999999 99999984 678899999999987 666
No 33
>KOG0645|consensus
Probab=99.08 E-value=8.8e-10 Score=69.15 Aligned_cols=63 Identities=19% Similarity=0.450 Sum_probs=52.8
Q ss_pred cCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC---cEEEEeeCCCCCeE-EeC
Q psy1940 15 LSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK---VQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 15 ~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~---~~~~~~~~~~~~~~-~~w 78 (78)
..+-+++.++.||.++|.|++||++|++||++++|++ |-||.+..+ .++..+..|.+-+. +.|
T Consensus 92 ~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKS-VWiWe~deddEfec~aVL~~HtqDVK~V~W 158 (312)
T KOG0645|consen 92 DGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKS-VWIWEIDEDDEFECIAVLQEHTQDVKHVIW 158 (312)
T ss_pred CCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCe-EEEEEecCCCcEEEEeeeccccccccEEEE
Confidence 3445689999999999999999999999999999999 999988744 57788888876655 444
No 34
>KOG0285|consensus
Probab=99.08 E-value=9.6e-10 Score=71.31 Aligned_cols=65 Identities=18% Similarity=0.342 Sum_probs=58.7
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+. +||++... .+.++.+|.++|.++.+.|-.-.+++++.|++ |++||++.|+-...+.+|...++
T Consensus 259 ~R-vWDiRtr~-----~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~t-vrlWDl~agkt~~tlt~hkksvr 323 (460)
T KOG0285|consen 259 IR-VWDIRTRA-----SVHVLSGHTNPVASVMCQPTDPQVITGSHDST-VRLWDLRAGKTMITLTHHKKSVR 323 (460)
T ss_pred EE-Eeeecccc-----eEEEecCCCCcceeEEeecCCCceEEecCCce-EEEeeeccCceeEeeecccceee
Confidence 45 89999987 99999999999999999997778999999999 99999999998888888777665
No 35
>KOG0315|consensus
Probab=99.08 E-value=8.1e-10 Score=68.86 Aligned_cols=64 Identities=20% Similarity=0.213 Sum_probs=56.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
||.+.+.- +....+.+|+..++..+||.||.+|+|++.|+. +++||++.++.++.+.+|+++..
T Consensus 241 iwn~~~~~----kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~-~rlW~~~~~k~v~qy~gh~K~~v 304 (311)
T KOG0315|consen 241 IWNTDDFF----KLELVLTGHQRWVWDCAFSADGEYLVTASSDHT-ARLWDLSAGKEVRQYQGHHKAAV 304 (311)
T ss_pred EEecCCce----eeEEEeecCCceEEeeeeccCccEEEecCCCCc-eeecccccCceeeecCCcccccE
Confidence 66665542 577788999999999999999999999999999 99999999999999999887654
No 36
>KOG0263|consensus
Probab=99.07 E-value=4.1e-10 Score=77.56 Aligned_cols=63 Identities=21% Similarity=0.360 Sum_probs=58.3
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+|...... +.+.|.+|-+-+.|++|.|+..++++||.|.+ +|+||+.+|..++.|.+|..++.
T Consensus 519 LWs~d~~~-----PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~t-VRlWDv~~G~~VRiF~GH~~~V~ 581 (707)
T KOG0263|consen 519 LWSTDHNK-----PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRT-VRLWDVSTGNSVRIFTGHKGPVT 581 (707)
T ss_pred eeecccCC-----chhhhcccccccceEEECCcccccccCCCCce-EEEEEcCCCcEEEEecCCCCceE
Confidence 67766654 88889999999999999999999999999999 99999999999999999999987
No 37
>KOG0308|consensus
Probab=99.06 E-value=8.1e-10 Score=75.50 Aligned_cols=63 Identities=27% Similarity=0.395 Sum_probs=57.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
|+ +||=+... .+..++||..-|..+..++||+.+++++.||+ ||+||+...+|+.++..|.+.
T Consensus 195 lr-~wDprt~~-----kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgt-IrlWdLgqQrCl~T~~vH~e~ 257 (735)
T KOG0308|consen 195 LR-LWDPRTCK-----KIMKLRGHTDNVRVLLVNDDGTRLLSASSDGT-IRLWDLGQQRCLATYIVHKEG 257 (735)
T ss_pred eE-Eecccccc-----ceeeeeccccceEEEEEcCCCCeEeecCCCce-EEeeeccccceeeeEEeccCc
Confidence 56 88877765 78889999999999999999999999999999 999999999999999988766
No 38
>KOG0265|consensus
Probab=99.06 E-value=1e-09 Score=69.56 Aligned_cols=65 Identities=12% Similarity=0.150 Sum_probs=57.4
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+|.+..-+ +...++.+|++.|..+.|.+|++.+++++.|++ ++.||+++|++++++++|..-++.
T Consensus 73 LWnv~gdc----eN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~-v~~wD~~tG~~~rk~k~h~~~vNs 137 (338)
T KOG0265|consen 73 LWNVYGDC----ENFWVLKGHSGAVMELHGMRDGSHILSCGTDKT-VRGWDAETGKRIRKHKGHTSFVNS 137 (338)
T ss_pred EEeccccc----cceeeeccccceeEeeeeccCCCEEEEecCCce-EEEEecccceeeehhccccceeee
Confidence 56665443 577788899999999999999999999999999 999999999999999999877764
No 39
>KOG0647|consensus
Probab=99.05 E-value=1.2e-09 Score=69.42 Aligned_cols=70 Identities=11% Similarity=0.306 Sum_probs=56.8
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
.+. +|++++...- ..+....|.+||.+++|+.||+.+++|+.|+. +++||+.++ ++..+..|..+++ +.|
T Consensus 51 tVR-~wevq~~g~~---~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~-~k~wDL~S~-Q~~~v~~Hd~pvkt~~w 121 (347)
T KOG0647|consen 51 TVR-IWEVQNSGQL---VPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQ-AKLWDLASG-QVSQVAAHDAPVKTCHW 121 (347)
T ss_pred ceE-EEEEecCCcc---cchhhhccCCCeEEEEEccCCceEEeeccCCc-eEEEEccCC-CeeeeeecccceeEEEE
Confidence 356 8999885322 23445679999999999999999999999999 999999999 5577888888887 444
No 40
>KOG1539|consensus
Probab=99.04 E-value=7.7e-10 Score=77.15 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=50.3
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
++|+.... .++.|.+|++.|+...|||||++|++++.|++ ||+||+.++.++-.+.-
T Consensus 560 vvD~~t~k-----vvR~f~gh~nritd~~FS~DgrWlisasmD~t-Ir~wDlpt~~lID~~~v 616 (910)
T KOG1539|consen 560 VVDVVTRK-----VVREFWGHGNRITDMTFSPDGRWLISASMDST-IRTWDLPTGTLIDGLLV 616 (910)
T ss_pred EEEchhhh-----hhHHhhccccceeeeEeCCCCcEEEEeecCCc-EEEEeccCcceeeeEec
Confidence 56776554 88889999999999999999999999999999 99999999988766553
No 41
>KOG0285|consensus
Probab=99.04 E-value=4.8e-10 Score=72.70 Aligned_cols=65 Identities=26% Similarity=0.421 Sum_probs=59.7
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
++ .||+..+. .++.+.+|-..|.|++..|.-..|+|++.|.+ +|+||+++...+..+.+|..++.
T Consensus 217 VK-CwDLe~nk-----vIR~YhGHlS~V~~L~lhPTldvl~t~grDst-~RvWDiRtr~~V~~l~GH~~~V~ 281 (460)
T KOG0285|consen 217 VK-CWDLEYNK-----VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDST-IRVWDIRTRASVHVLSGHTNPVA 281 (460)
T ss_pred eE-EEechhhh-----hHHHhccccceeEEEeccccceeEEecCCcce-EEEeeecccceEEEecCCCCcce
Confidence 35 79998886 88889999999999999999999999999999 99999999999999999988765
No 42
>KOG0296|consensus
Probab=99.03 E-value=2.9e-09 Score=68.92 Aligned_cols=57 Identities=21% Similarity=0.365 Sum_probs=52.1
Q ss_pred eEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 6 CSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 6 ~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
.+||+.+++ ....+.+|++.|.++.||.||++||||+.+|. |+||+..++.....+.
T Consensus 89 flW~~~~ge-----~~~eltgHKDSVt~~~FshdgtlLATGdmsG~-v~v~~~stg~~~~~~~ 145 (399)
T KOG0296|consen 89 FLWDISTGE-----FAGELTGHKDSVTCCSFSHDGTLLATGDMSGK-VLVFKVSTGGEQWKLD 145 (399)
T ss_pred EEEEccCCc-----ceeEecCCCCceEEEEEccCceEEEecCCCcc-EEEEEcccCceEEEee
Confidence 489998887 88889999999999999999999999999999 9999999998777665
No 43
>PTZ00420 coronin; Provisional
Probab=99.02 E-value=3.7e-09 Score=72.33 Aligned_cols=58 Identities=22% Similarity=0.414 Sum_probs=46.6
Q ss_pred CcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCCCc--------EEEEeeCCCCCeE-EeC
Q psy1940 20 SPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLKKV--------QLVELRRGSDPAT-LYW 78 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~~~--------~~~~~~~~~~~~~-~~w 78 (78)
.+..+.+|.++|.+++|+|+ ++.|++|+.|+. |++||+.++. .+..+.+|...++ +.|
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~Dgt-IrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf 133 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLT-IRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDW 133 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCe-EEEEECCCCCccccccccceEEeecCCCcEEEEEE
Confidence 66788999999999999996 799999999999 9999998642 3345667766654 444
No 44
>KOG0649|consensus
Probab=99.01 E-value=1.2e-09 Score=68.14 Aligned_cols=64 Identities=20% Similarity=0.326 Sum_probs=53.2
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
.||+.++. ..+++++|++.|.+++-......+.+|++||+ +|+||.++++++..++....+..+
T Consensus 140 ~~dlE~G~-----i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGt-vRvWd~kt~k~v~~ie~yk~~~~l 203 (325)
T KOG0649|consen 140 QVDLEDGR-----IQREYRGHTDYVHSVVGRNANGQILSGAEDGT-VRVWDTKTQKHVSMIEPYKNPNLL 203 (325)
T ss_pred EEEecCCE-----EEEEEcCCcceeeeeeecccCcceeecCCCcc-EEEEeccccceeEEeccccChhhc
Confidence 46888775 88999999999999988555557899999999 999999999999888765555443
No 45
>KOG0639|consensus
Probab=99.00 E-value=2.2e-10 Score=76.85 Aligned_cols=55 Identities=24% Similarity=0.393 Sum_probs=50.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEe
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~ 67 (78)
|||+++.. .++.|++|.+...||..++||+.|.||+.|.+ +|.||++.++.+.+.
T Consensus 535 vwDLhnq~-----~VrqfqGhtDGascIdis~dGtklWTGGlDnt-vRcWDlregrqlqqh 589 (705)
T KOG0639|consen 535 VWDLHNQT-----LVRQFQGHTDGASCIDISKDGTKLWTGGLDNT-VRCWDLREGRQLQQH 589 (705)
T ss_pred EEEcccce-----eeecccCCCCCceeEEecCCCceeecCCCccc-eeehhhhhhhhhhhh
Confidence 89999987 99999999999999999999999999999999 999999998766443
No 46
>KOG0278|consensus
Probab=98.97 E-value=2.3e-09 Score=67.03 Aligned_cols=54 Identities=24% Similarity=0.443 Sum_probs=44.9
Q ss_pred ceeeeEEEcccCCcCCCCCcEEe-cCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 2 LYLQCSQDLSSTELSSSSSPVTI-NAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 2 ~~~~~i~d~~~~~~~~~~~~~~~-~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
.|+- -||..+.+ .+-.+ .+|-++|.|+.|+|||...++||+||+ ||+|.+..++
T Consensus 246 ~~~~-kfDy~Tge-----Ei~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGT-irlWQt~~~~ 300 (334)
T KOG0278|consen 246 FKVY-KFDYNTGE-----EIGSYNKGHFGPVHCVRFSPDGELYASGSEDGT-IRLWQTTPGK 300 (334)
T ss_pred eEEE-EEeccCCc-----eeeecccCCCCceEEEEECCCCceeeccCCCce-EEEEEecCCC
Confidence 3555 67877766 44445 799999999999999999999999999 9999887664
No 47
>KOG0319|consensus
Probab=98.97 E-value=1.4e-09 Score=75.03 Aligned_cols=64 Identities=17% Similarity=0.280 Sum_probs=59.5
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
.++ ||.+.+.+ |.++|.||...|..+.|-.+|+.|++++.||- +++|+++++.|+.++..|.+.
T Consensus 528 TvK-IW~is~fS-----ClkT~eGH~~aVlra~F~~~~~qliS~~adGl-iKlWnikt~eC~~tlD~H~Dr 591 (775)
T KOG0319|consen 528 TVK-IWSISTFS-----CLKTFEGHTSAVLRASFIRNGKQLISAGADGL-IKLWNIKTNECEMTLDAHNDR 591 (775)
T ss_pred eEE-EEEeccce-----eeeeecCccceeEeeeeeeCCcEEEeccCCCc-EEEEeccchhhhhhhhhccce
Confidence 367 99999988 99999999999999999999999999999999 999999999999999888664
No 48
>KOG0281|consensus
Probab=98.96 E-value=3.9e-10 Score=73.07 Aligned_cols=61 Identities=26% Similarity=0.430 Sum_probs=54.3
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
++ |||..+.. +.+.+.||.+.|.|+.|.. +.+++|+.|.+ |++||.++|+++.++.+|.+.
T Consensus 219 ik-iWD~n~~~-----c~~~L~GHtGSVLCLqyd~--rviisGSSDsT-vrvWDv~tge~l~tlihHcea 279 (499)
T KOG0281|consen 219 IK-IWDKNSLE-----CLKILTGHTGSVLCLQYDE--RVIVSGSSDST-VRVWDVNTGEPLNTLIHHCEA 279 (499)
T ss_pred eE-EeccccHH-----HHHhhhcCCCcEEeeeccc--eEEEecCCCce-EEEEeccCCchhhHHhhhcce
Confidence 56 89988887 9999999999999998864 59999999999 999999999999998887654
No 49
>KOG0316|consensus
Probab=98.96 E-value=1.7e-09 Score=67.16 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=58.8
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
++ +|....+. +++++.+|..+|..++.+.|...+++++.|+. +.+||+++|+.++.+++|...++
T Consensus 41 vr-LWNp~rg~-----liktYsghG~EVlD~~~s~Dnskf~s~GgDk~-v~vwDV~TGkv~Rr~rgH~aqVN 105 (307)
T KOG0316|consen 41 VR-LWNPLRGA-----LIKTYSGHGHEVLDAALSSDNSKFASCGGDKA-VQVWDVNTGKVDRRFRGHLAQVN 105 (307)
T ss_pred EE-eecccccc-----eeeeecCCCceeeeccccccccccccCCCCce-EEEEEcccCeeeeecccccceee
Confidence 44 67766665 99999999999999999999999999999998 99999999999999999987766
No 50
>KOG0279|consensus
Probab=98.96 E-value=5e-09 Score=66.01 Aligned_cols=67 Identities=18% Similarity=0.274 Sum_probs=58.2
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
+|++..-+..-...++.|.+|...|..++.++||++.++++.|++ +|+||+.+|+..+.|.+|...+
T Consensus 42 ~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~-lrlWDl~~g~~t~~f~GH~~dV 108 (315)
T KOG0279|consen 42 VWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGT-LRLWDLATGESTRRFVGHTKDV 108 (315)
T ss_pred EEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccce-EEEEEecCCcEEEEEEecCCce
Confidence 677766554444678899999999999999999999999999999 9999999999999999887544
No 51
>KOG0267|consensus
Probab=98.94 E-value=1.4e-09 Score=75.13 Aligned_cols=62 Identities=18% Similarity=0.313 Sum_probs=56.7
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
+||++..+ |.+.+.+|...+.+++|+|+|.+++++++|.+ ++|||..-|+.+.+|+.|...+
T Consensus 138 iwD~Rk~G-----c~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~t-vki~d~~agk~~~ef~~~e~~v 199 (825)
T KOG0267|consen 138 IWDIRKKG-----CSHTYKSHTRVVDVLRLSPDGRWVASGGEDNT-VKIWDLTAGKLSKEFKSHEGKV 199 (825)
T ss_pred ehhhhccC-----ceeeecCCcceeEEEeecCCCceeeccCCcce-eeeecccccccccccccccccc
Confidence 89999776 99999999999999999999999999999999 9999999999999998765544
No 52
>KOG0274|consensus
Probab=98.94 E-value=5.6e-09 Score=71.07 Aligned_cols=63 Identities=19% Similarity=0.385 Sum_probs=56.9
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+. +|++.++. +++++.+|.++|+++..+ +..+++|+.|++ |++||+.++++++.+.+|...+.
T Consensus 313 Vk-VW~v~n~~-----~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~-v~VW~~~~~~cl~sl~gH~~~V~ 375 (537)
T KOG0274|consen 313 VK-VWDVTNGA-----CLNLLRGHTGPVNCVQLD--EPLLVSGSYDGT-VKVWDPRTGKCLKSLSGHTGRVY 375 (537)
T ss_pred EE-EEeccCcc-----eEEEeccccccEEEEEec--CCEEEEEecCce-EEEEEhhhceeeeeecCCcceEE
Confidence 45 89998776 999999999999999988 789999999998 99999999999999999887665
No 53
>KOG1445|consensus
Probab=98.93 E-value=2.6e-09 Score=73.58 Aligned_cols=54 Identities=24% Similarity=0.369 Sum_probs=48.9
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcE
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQ 63 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~ 63 (78)
.+. +||+++.. ....|.+|++.|..++|||||+.+|+.+.||. +|+|..++++.
T Consensus 701 Ti~-lWDl~~~~-----~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~-~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 701 TIE-LWDLANAK-----LYSRLVGHTDQIFGIAWSPDGRRIATVCKDGT-LRVYEPRSREQ 754 (1012)
T ss_pred eee-eeehhhhh-----hhheeccCcCceeEEEECCCCcceeeeecCce-EEEeCCCCCCC
Confidence 467 99999886 77789999999999999999999999999999 99999988753
No 54
>KOG0277|consensus
Probab=98.92 E-value=6.7e-09 Score=64.96 Aligned_cols=69 Identities=25% Similarity=0.368 Sum_probs=55.7
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCC-cEEEEeeCCCCCeE-EeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKK-VQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~-~~~~~~~~~~~~~~-~~w 78 (78)
+++ +||++... ....+..|..+|.|..|+. +.+.|+|++.|+. ||+||+++- .++.++.+|.-.++ ++|
T Consensus 171 ~l~-lwdvr~~g-----k~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~-vr~wDir~~r~pl~eL~gh~~AVRkvk~ 242 (311)
T KOG0277|consen 171 TLR-LWDVRSPG-----KFMSIEAHNSEILCCDWSKYNHNVLATGGVDNL-VRGWDIRNLRTPLFELNGHGLAVRKVKF 242 (311)
T ss_pred eEE-EEEecCCC-----ceeEEEeccceeEeecccccCCcEEEecCCCce-EEEEehhhccccceeecCCceEEEEEec
Confidence 567 99998876 4455999999999999988 6789999999999 999999974 56777777765554 443
No 55
>KOG0265|consensus
Probab=98.92 E-value=4.3e-09 Score=66.82 Aligned_cols=60 Identities=22% Similarity=0.406 Sum_probs=54.1
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC----CcEEEEeeCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK----KVQLVELRRG 70 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~----~~~~~~~~~~ 70 (78)
+| +||++++. ..+++.+|.++|..++.+|+|.++.+-++|.+ +++||++. .+++..+.+|
T Consensus 198 ik-vWd~r~~d-----~~~~lsGh~DtIt~lsls~~gs~llsnsMd~t-vrvwd~rp~~p~~R~v~if~g~ 261 (338)
T KOG0265|consen 198 IK-VWDLRKND-----GLYTLSGHADTITGLSLSRYGSFLLSNSMDNT-VRVWDVRPFAPSQRCVKIFQGH 261 (338)
T ss_pred ee-eeccccCc-----ceEEeecccCceeeEEeccCCCccccccccce-EEEEEecccCCCCceEEEeecc
Confidence 68 99999987 99999999999999999999999999999999 99999985 3567777764
No 56
>KOG0303|consensus
Probab=98.92 E-value=7.7e-09 Score=67.73 Aligned_cols=59 Identities=17% Similarity=0.316 Sum_probs=52.4
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
+. +|++.+++ ...++. |.+.|.+++||.||++|+|.+.|+. |||||.+++..+.+-..|
T Consensus 156 v~-iWnv~tge-----ali~l~-hpd~i~S~sfn~dGs~l~TtckDKk-vRv~dpr~~~~v~e~~~h 214 (472)
T KOG0303|consen 156 VS-IWNVGTGE-----ALITLD-HPDMVYSMSFNRDGSLLCTTCKDKK-VRVIDPRRGTVVSEGVAH 214 (472)
T ss_pred EE-EEeccCCc-----eeeecC-CCCeEEEEEeccCCceeeeecccce-eEEEcCCCCcEeeecccc
Confidence 35 89998887 777777 9999999999999999999999999 999999999998877544
No 57
>KOG0274|consensus
Probab=98.92 E-value=9.9e-09 Score=69.88 Aligned_cols=67 Identities=22% Similarity=0.224 Sum_probs=58.6
Q ss_pred eeeeEEEcccCCcCCCCCcEE-ecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 3 YLQCSQDLSSTELSSSSSPVT-INAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~-~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+++ +||..+.. ...+ +.+|.+.|.+++|...+..|++|+.|.+ +++||+.+|.|...+.+|...+.+
T Consensus 229 tl~-~~~~~~~~-----~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t-~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 229 TLH-LWDLNNGY-----LILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKT-ERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred eeE-Eeecccce-----EEEeeccCCCCCceeEEEecCCCEEEEEecCCc-EEeEecCCCcEEEEecCCCceEEE
Confidence 346 78877765 6666 9999999999999888899999999999 999999999999999998877663
No 58
>KOG0643|consensus
Probab=98.91 E-value=1.2e-08 Score=64.24 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=53.2
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
+|-..+++ .+-++.+|.+.|+|+..+.+.++++||+.|.+ +++||+.+|+++..++...
T Consensus 36 vw~s~nGe-----rlGty~GHtGavW~~Did~~s~~liTGSAD~t-~kLWDv~tGk~la~~k~~~ 94 (327)
T KOG0643|consen 36 VWYSLNGE-----RLGTYDGHTGAVWCCDIDWDSKHLITGSADQT-AKLWDVETGKQLATWKTNS 94 (327)
T ss_pred EEEecCCc-----eeeeecCCCceEEEEEecCCcceeeeccccce-eEEEEcCCCcEEEEeecCC
Confidence 56666666 89999999999999999999999999999999 9999999999999888653
No 59
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.90 E-value=1.6e-08 Score=60.54 Aligned_cols=64 Identities=27% Similarity=0.432 Sum_probs=53.8
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
+. +||+++.. ....+..|..++.++.|+|+++.+++++.|+. +++||++++..+..+..+..++
T Consensus 159 i~-i~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-i~i~d~~~~~~~~~~~~~~~~i 222 (289)
T cd00200 159 IK-LWDLRTGK-----CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGT-IKLWDLSTGKCLGTLRGHENGV 222 (289)
T ss_pred EE-EEEccccc-----cceeEecCccccceEEECCCcCEEEEecCCCc-EEEEECCCCceecchhhcCCce
Confidence 45 88887654 77788899999999999999999999999999 9999999988888886555443
No 60
>KOG0293|consensus
Probab=98.90 E-value=3.7e-09 Score=69.60 Aligned_cols=69 Identities=9% Similarity=0.082 Sum_probs=56.4
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC--CCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG--SDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~--~~~~~~~w 78 (78)
+|++-.-. .-+..+++.+|..+|.-|.||||.++|++++.|.. +++||+.+|.+...++.+ -....++|
T Consensus 250 iw~v~~d~--~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~-~~lwDv~tgd~~~~y~~~~~~S~~sc~W 320 (519)
T KOG0293|consen 250 IWIVVYDV--HFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEV-LSLWDVDTGDLRHLYPSGLGFSVSSCAW 320 (519)
T ss_pred EEEEecCc--ceeeeeeeecccCceEEEEECCCCCeEEecCchHh-eeeccCCcchhhhhcccCcCCCcceeEE
Confidence 55554433 13478899999999999999999999999999999 999999999999888865 23344776
No 61
>KOG4283|consensus
Probab=98.89 E-value=9.9e-09 Score=65.48 Aligned_cols=61 Identities=21% Similarity=0.368 Sum_probs=51.1
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCC-EEEEEcCCCCEEEEeeCCCC-cEEEEeeCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGT-MIATASSKGTLIRVWDTLKK-VQLVELRRG 70 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~-~l~s~~~d~~~i~i~d~~~~-~~~~~~~~~ 70 (78)
.++ +.|+.+++ ..+++.+|.+.|.+|.|+|... .|++|+.||. ||+||++.. .+...+..|
T Consensus 169 ~Vr-LCDi~SGs-----~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~-irlWDiRrasgcf~~lD~h 231 (397)
T KOG4283|consen 169 QVR-LCDIASGS-----FSHTLSGHRDGVLAVEWSPSSEWVLATGSADGA-IRLWDIRRASGCFRVLDQH 231 (397)
T ss_pred cEE-EEeccCCc-----ceeeeccccCceEEEEeccCceeEEEecCCCce-EEEEEeecccceeEEeecc
Confidence 367 88999887 9999999999999999999665 6789999999 999999975 455555443
No 62
>KOG0306|consensus
Probab=98.89 E-value=5.4e-09 Score=72.61 Aligned_cols=65 Identities=32% Similarity=0.473 Sum_probs=58.1
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+| ||+..+.+ ...+|.+|+..|+++.|+.+|..|++||.|+. |.+||+-...-+..+++|.+.++
T Consensus 89 Vq-if~~~s~~-----~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~-IIvwDlV~E~Gl~rL~GHkd~iT 153 (888)
T KOG0306|consen 89 VQ-IFSLESEE-----ILITFNGHKAAVTTLKFDKIGTRLASGSKDTD-IIVWDLVGEEGLFRLRGHKDSIT 153 (888)
T ss_pred EE-eeccCCCc-----eeeeecccccceEEEEEcccCceEeecCCCcc-EEEEEeccceeeEEeecchHHHh
Confidence 46 78877665 88899999999999999999999999999999 99999998888899999877654
No 63
>KOG0275|consensus
Probab=98.88 E-value=5.7e-10 Score=71.93 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=60.4
Q ss_pred eeeeEEEcccCCcCCCCCcEEec-CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTIN-AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~-~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+++ +|.++++. |++.|. +|...|.|+.||.|++.+.+++.|.+ +|+.-+.+|+++.++++|+..++
T Consensus 286 kIK-vWri~tG~-----ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~t-vRiHGlKSGK~LKEfrGHsSyvn 352 (508)
T KOG0275|consen 286 KIK-VWRIETGQ-----CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQT-VRIHGLKSGKCLKEFRGHSSYVN 352 (508)
T ss_pred cEE-EEEEecch-----HHHHhhhhhccCeeEEEEccCcchhhcccccce-EEEeccccchhHHHhcCcccccc
Confidence 456 89999887 988897 99999999999999999999999999 99999999999999999976654
No 64
>KOG0291|consensus
Probab=98.88 E-value=9.8e-09 Score=71.39 Aligned_cols=49 Identities=18% Similarity=0.435 Sum_probs=45.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
+|+++++. ..-.+.||.+||.+++|+|+|+.|+++|-|.+ ||+||+-+.
T Consensus 462 vWS~qTGq-----llDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT-VRiW~if~s 510 (893)
T KOG0291|consen 462 VWSVQTGQ-----LLDILSGHEGPVSGLSFSPDGSLLASGSWDKT-VRIWDIFSS 510 (893)
T ss_pred EEEeecCe-----eeehhcCCCCcceeeEEccccCeEEeccccce-EEEEEeecc
Confidence 88988876 88889999999999999999999999999999 999997654
No 65
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.88 E-value=1e-08 Score=61.37 Aligned_cols=56 Identities=30% Similarity=0.553 Sum_probs=48.2
Q ss_pred EEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe-EEeC
Q psy1940 22 VTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA-TLYW 78 (78)
Q Consensus 22 ~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~-~~~w 78 (78)
+++.+|.++|.+++|+|+++.|++++.|+. +++||+.++.....+..+..++ .+.|
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~-i~i~~~~~~~~~~~~~~~~~~i~~~~~ 59 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGT-IKVWDLETGELLRTLKGHTGPVRDVAA 59 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcE-EEEEEeeCCCcEEEEecCCcceeEEEE
Confidence 457799999999999999999999999999 9999999888878887777666 4543
No 66
>KOG0273|consensus
Probab=98.87 E-value=1.1e-08 Score=68.05 Aligned_cols=58 Identities=24% Similarity=0.404 Sum_probs=53.1
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC-eEEeC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP-ATLYW 78 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~-~~~~w 78 (78)
...+|..|++||.++.|+.+|++|++++.|++ +.+||..+|.+-+.++-|..+ ..+-|
T Consensus 268 l~~tl~~HkgPI~slKWnk~G~yilS~~vD~t-tilwd~~~g~~~q~f~~~s~~~lDVdW 326 (524)
T KOG0273|consen 268 LISTLGQHKGPIFSLKWNKKGTYILSGGVDGT-TILWDAHTGTVKQQFEFHSAPALDVDW 326 (524)
T ss_pred hhhhhhccCCceEEEEEcCCCCEEEeccCCcc-EEEEeccCceEEEeeeeccCCccceEE
Confidence 78888999999999999999999999999999 999999999999999888887 55666
No 67
>KOG0276|consensus
Probab=98.87 E-value=1e-08 Score=70.31 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=59.3
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
.++ +||-.+.= .+.++|.+|.-.|.+|+|+| |.+.+|+++.|++ |+||.+.+..+..++++|...+++
T Consensus 120 ~iK-lW~we~~w----a~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrT-VKVWslgs~~~nfTl~gHekGVN~ 188 (794)
T KOG0276|consen 120 TIK-LWDWENEW----ACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRT-VKVWSLGSPHPNFTLEGHEKGVNC 188 (794)
T ss_pred EEE-EeeccCce----eeeeEEcCcceEEEEEEecCCCccceeeeecccc-EEEEEcCCCCCceeeeccccCcce
Confidence 356 77765543 48999999999999999999 7789999999999 999999999999999999888873
No 68
>KOG0650|consensus
Probab=98.87 E-value=1.2e-08 Score=69.63 Aligned_cols=59 Identities=17% Similarity=0.446 Sum_probs=53.4
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
.+...+++|++.+.+|+-.|.|..|++|+.||+ +|||.+.+|+|++.+........+.|
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGt-vriWEi~TgRcvr~~~~d~~I~~vaw 449 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGT-VRIWEIATGRCVRTVQFDSEIRSVAW 449 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCcceeeecCCCCc-EEEEEeecceEEEEEeecceeEEEEe
Confidence 367788999999999999999999999999999 99999999999999987766666766
No 69
>KOG0284|consensus
Probab=98.86 E-value=3.7e-09 Score=69.31 Aligned_cols=65 Identities=15% Similarity=0.289 Sum_probs=57.8
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+. |||..... .-..+++|.--|.++.|.|.-..+++++.|.. |++||.++|.++.++.+|+..+-
T Consensus 204 ik-iWdf~~~k-----ee~vL~GHgwdVksvdWHP~kgLiasgskDnl-VKlWDprSg~cl~tlh~HKntVl 268 (464)
T KOG0284|consen 204 IK-IWDFRMPK-----EERVLRGHGWDVKSVDWHPTKGLIASGSKDNL-VKLWDPRSGSCLATLHGHKNTVL 268 (464)
T ss_pred EE-EEeccCCc-----hhheeccCCCCcceeccCCccceeEEccCCce-eEeecCCCcchhhhhhhccceEE
Confidence 35 88887765 66778999999999999999999999999998 99999999999999998887654
No 70
>KOG1446|consensus
Probab=98.84 E-value=1.9e-08 Score=63.94 Aligned_cols=50 Identities=18% Similarity=0.206 Sum_probs=44.7
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+.++.|.||+..|++++.+|.+..+++++.|++ ||+||++..++...+.-
T Consensus 91 kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~t-vrLWDlR~~~cqg~l~~ 140 (311)
T KOG1446|consen 91 KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKT-VRLWDLRVKKCQGLLNL 140 (311)
T ss_pred ceEEEcCCCCceEEEEEecCCCCeEEecccCCe-EEeeEecCCCCceEEec
Confidence 499999999999999999999999999999999 99999997766555543
No 71
>KOG0292|consensus
Probab=98.83 E-value=3.4e-09 Score=74.82 Aligned_cols=65 Identities=15% Similarity=0.193 Sum_probs=60.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+| +||-+=.. ++..|..|.+||..|.|.|++-.+++|+.|-. |++|+..+.+|+.++.+|.+.++
T Consensus 33 IQ-lWDYRM~t-----li~rFdeHdGpVRgv~FH~~qplFVSGGDDyk-IkVWnYk~rrclftL~GHlDYVR 97 (1202)
T KOG0292|consen 33 IQ-LWDYRMGT-----LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYK-IKVWNYKTRRCLFTLLGHLDYVR 97 (1202)
T ss_pred ee-eehhhhhh-----HHhhhhccCCccceeeecCCCCeEEecCCccE-EEEEecccceehhhhccccceeE
Confidence 58 99988665 99999999999999999999999999999999 99999999999999999988776
No 72
>KOG0264|consensus
Probab=98.83 E-value=1.5e-08 Score=66.67 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=47.2
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~ 60 (78)
+++ +||+|+.. ++.+++.+|++.|.+|.|||. .+.||+++.|+. +.+||+..
T Consensus 296 tV~-LwDlRnL~----~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~r-l~vWDls~ 348 (422)
T KOG0264|consen 296 TVA-LWDLRNLN----KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRR-LNVWDLSR 348 (422)
T ss_pred cEE-Eeechhcc----cCceeccCCCcceEEEEeCCCCCceeEecccCCc-EEEEeccc
Confidence 467 99999987 699999999999999999994 579999999999 99999874
No 73
>KOG1407|consensus
Probab=98.81 E-value=1.2e-08 Score=64.04 Aligned_cols=57 Identities=23% Similarity=0.362 Sum_probs=50.9
Q ss_pred CCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 18 SSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 18 ~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
-+.++++++|.....||.|+|+|++||+|+.|.. +.+||+..--|++.+.+..-|++
T Consensus 179 Lkpv~si~AH~snCicI~f~p~GryfA~GsADAl-vSLWD~~ELiC~R~isRldwpVR 235 (313)
T KOG1407|consen 179 LKPVQSIKAHPSNCICIEFDPDGRYFATGSADAL-VSLWDVDELICERCISRLDWPVR 235 (313)
T ss_pred cccccccccCCcceEEEEECCCCceEeeccccce-eeccChhHhhhheeeccccCceE
Confidence 3588999999999999999999999999999999 99999998888888887766665
No 74
>KOG0277|consensus
Probab=98.80 E-value=3.9e-08 Score=61.60 Aligned_cols=61 Identities=25% Similarity=0.376 Sum_probs=49.9
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
++ +||-.... .+++|.+|.+-|+..+|+| .++.++++|.|++ .++||++.......++.|.
T Consensus 129 iK-LW~~~r~~-----Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~-l~lwdvr~~gk~~~i~ah~ 190 (311)
T KOG0277|consen 129 IK-LWDPNRPN-----SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGT-LRLWDVRSPGKFMSIEAHN 190 (311)
T ss_pred eE-eecCCCCc-----ceEeecCCccEEEEEecCCCCCCeEEEccCCce-EEEEEecCCCceeEEEecc
Confidence 45 77755444 8999999999999999999 7899999999999 9999998643334477765
No 75
>KOG0275|consensus
Probab=98.79 E-value=6.3e-09 Score=67.21 Aligned_cols=52 Identities=23% Similarity=0.323 Sum_probs=48.2
Q ss_pred CCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 18 SSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 18 ~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
.++.+.|++|...|+...|++||.++.+++.||+ |++|+..+++|+.+++..
T Consensus 338 GK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgt-vkvW~~KtteC~~Tfk~~ 389 (508)
T KOG0275|consen 338 GKCLKEFRGHSSYVNEATFTDDGHHIISASSDGT-VKVWHGKTTECLSTFKPL 389 (508)
T ss_pred chhHHHhcCccccccceEEcCCCCeEEEecCCcc-EEEecCcchhhhhhccCC
Confidence 3699999999999999999999999999999999 999999999999888743
No 76
>KOG0281|consensus
Probab=98.78 E-value=1.7e-09 Score=70.13 Aligned_cols=63 Identities=27% Similarity=0.398 Sum_probs=55.2
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
++ +|++.+.+ .++++.+|+-.|-|+.+. |+++++|+.|.+ ||+||+..|.+++.+++|.+-++
T Consensus 342 ik-vW~~st~e-----fvRtl~gHkRGIAClQYr--~rlvVSGSSDnt-IRlwdi~~G~cLRvLeGHEeLvR 404 (499)
T KOG0281|consen 342 IK-VWSTSTCE-----FVRTLNGHKRGIACLQYR--DRLVVSGSSDNT-IRLWDIECGACLRVLEGHEELVR 404 (499)
T ss_pred EE-EEecccee-----eehhhhcccccceehhcc--CeEEEecCCCce-EEEEeccccHHHHHHhchHHhhh
Confidence 56 89988876 999999999999988765 789999999999 99999999999999998876544
No 77
>KOG0302|consensus
Probab=98.78 E-value=2.5e-08 Score=65.07 Aligned_cols=54 Identities=19% Similarity=0.328 Sum_probs=47.3
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
++. |||+++...+ +.+.+|.-|+.+|++|.|+| +.+.|++++.|.. |.+||+.-
T Consensus 325 t~~-iwDLR~~~~~--~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Q-itiWDlsv 379 (440)
T KOG0302|consen 325 TLS-IWDLRQFKSG--QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQ-ITIWDLSV 379 (440)
T ss_pred eEE-EEEhhhccCC--CcceeEEeccCCeeEEEeccccCceEEeccCCCc-EEEEEeec
Confidence 567 9999998744 68999999999999999999 5678889999999 99999864
No 78
>KOG0276|consensus
Probab=98.77 E-value=9.1e-09 Score=70.52 Aligned_cols=65 Identities=20% Similarity=0.387 Sum_probs=58.0
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCC--CEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTG--TMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg--~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
++ +|.+.+.. +..++.+|...|+||.|-+-| -+|+||+.|.+ ++|||.++..|++++++|..-++
T Consensus 165 VK-VWslgs~~-----~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~t-iKvWDyQtk~CV~TLeGHt~Nvs 231 (794)
T KOG0276|consen 165 VK-VWSLGSPH-----PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLT-IKVWDYQTKSCVQTLEGHTNNVS 231 (794)
T ss_pred EE-EEEcCCCC-----CceeeeccccCcceEEeccCCCcceEEecCCCce-EEEeecchHHHHHHhhcccccce
Confidence 56 78887776 999999999999999998755 49999999999 99999999999999999987766
No 79
>KOG2394|consensus
Probab=98.77 E-value=1.5e-08 Score=68.39 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=54.5
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
||. |||....+ ....++.--+.+.|++|||||+++++|++|.- |.||....++++..=++|...++
T Consensus 313 fLR-vF~fdt~e-----Llg~mkSYFGGLLCvcWSPDGKyIvtGGEDDL-VtVwSf~erRVVARGqGHkSWVs 378 (636)
T KOG2394|consen 313 FLR-IFDFDTQE-----LLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDL-VTVWSFEERRVVARGQGHKSWVS 378 (636)
T ss_pred eEE-EeeccHHH-----HHHHHHhhccceEEEEEcCCccEEEecCCcce-EEEEEeccceEEEecccccccee
Confidence 456 66665544 55555666778899999999999999999998 99999999999988888887776
No 80
>KOG0310|consensus
Probab=98.76 E-value=1.4e-08 Score=67.43 Aligned_cols=66 Identities=20% Similarity=0.269 Sum_probs=54.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+| +||+.+.. .++.+++|+.|++.+.|+|+ ++.|++|+.|+. +++||+.++.....+.+|.+.+++
T Consensus 92 V~-vfD~k~r~-----iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v-~k~~d~s~a~v~~~l~~htDYVR~ 158 (487)
T KOG0310|consen 92 VK-VFDMKSRV-----ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKV-VKYWDLSTAYVQAELSGHTDYVRC 158 (487)
T ss_pred EE-EeccccHH-----HHHHHhhccCceeEEEecccCCeEEEecCCCce-EEEEEcCCcEEEEEecCCcceeEe
Confidence 56 88855543 78889999999999999995 567777888887 999999999887788899888773
No 81
>KOG0283|consensus
Probab=98.76 E-value=2.4e-08 Score=69.29 Aligned_cols=53 Identities=19% Similarity=0.371 Sum_probs=46.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQL 64 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~~ 64 (78)
+. ||++.... |+++| .|.+-|+||+|+| |.+++++|+.|+. +|||++...+++
T Consensus 392 VR-LWh~~~~~-----CL~~F-~HndfVTcVaFnPvDDryFiSGSLD~K-vRiWsI~d~~Vv 445 (712)
T KOG0283|consen 392 VR-LWHPGRKE-----CLKVF-SHNDFVTCVAFNPVDDRYFISGSLDGK-VRLWSISDKKVV 445 (712)
T ss_pred EE-eecCCCcc-----eeeEE-ecCCeeEEEEecccCCCcEeecccccc-eEEeecCcCeeE
Confidence 56 88887665 99999 4999999999999 8899999999999 999999876654
No 82
>KOG0645|consensus
Probab=98.76 E-value=5.5e-08 Score=61.24 Aligned_cols=69 Identities=19% Similarity=0.330 Sum_probs=53.0
Q ss_pred EEEcccCCcCCCCCcEEec-CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC--cEEEEeeCCCCCeE-EeC
Q psy1940 7 SQDLSSTELSSSSSPVTIN-AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK--VQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~-~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~--~~~~~~~~~~~~~~-~~w 78 (78)
+|++..+. .-.+..++. +|+..|.+++|+|.|++|+++|.|.+ +-||.-..+ +++..+++|...+. +.|
T Consensus 41 iw~~~~~~--s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t-~~Iw~k~~~efecv~~lEGHEnEVK~Vaw 113 (312)
T KOG0645|consen 41 IWSTSSGD--SWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT-VVIWKKEDGEFECVATLEGHENEVKCVAW 113 (312)
T ss_pred EEecCCCC--cEEEEEeccccchheeeeeeecCCCcEEEEeeccce-EEEeecCCCceeEEeeeeccccceeEEEE
Confidence 66665421 112444443 79999999999999999999999999 999975544 68999999988876 444
No 83
>KOG0307|consensus
Probab=98.72 E-value=2.1e-08 Score=71.68 Aligned_cols=69 Identities=19% Similarity=0.272 Sum_probs=59.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCC-CEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTG-TMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg-~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
+| +||+|... ..++++++|+..|.++.|++.+ .+|++++.|+. |.+|+.++|+.+.+++...+... +.|
T Consensus 234 iq-lWDlR~as----sP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~-ii~wN~~tgEvl~~~p~~~nW~fdv~w 304 (1049)
T KOG0307|consen 234 IQ-LWDLRFAS----SPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNR-IICWNPNTGEVLGELPAQGNWCFDVQW 304 (1049)
T ss_pred eE-eecccccC----CchhhhcccccceeeeccCCCCchhhhcccCCCC-eeEecCCCceEeeecCCCCcceeeeee
Confidence 57 99999987 6888899999999999999965 89999999999 99999999999999987555432 444
No 84
>KOG0294|consensus
Probab=98.72 E-value=6.9e-08 Score=61.83 Aligned_cols=65 Identities=15% Similarity=0.228 Sum_probs=58.0
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCC--EEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGT--MIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~--~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+. |||++... ....+-.|.+.|+++.|.+..+ +|.+|++||. |.+||+.+..++..+++|...++
T Consensus 65 I~-IYDm~k~~-----qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~-i~iw~~~~W~~~~slK~H~~~Vt 131 (362)
T KOG0294|consen 65 IH-IYDMRKRK-----QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGH-IIIWRVGSWELLKSLKAHKGQVT 131 (362)
T ss_pred EE-EEeccchh-----hhcceeccccceEEEEecCCcchhheeeecCCCc-EEEEEcCCeEEeeeecccccccc
Confidence 45 89998876 7888889999999999999876 9999999999 99999999999999999877655
No 85
>KOG0288|consensus
Probab=98.71 E-value=9.1e-08 Score=62.93 Aligned_cols=61 Identities=20% Similarity=0.329 Sum_probs=47.6
Q ss_pred EEEcccCCcCCCCCcEEecCCc----cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQ----SELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~----~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
++|++..+ ..+++.+.. .-.+.+.|||++.|+++|+.||. |.||++.++++...+...+.+
T Consensus 367 viDlRt~e-----I~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgs-v~iW~v~tgKlE~~l~~s~s~ 431 (459)
T KOG0288|consen 367 VIDLRTKE-----IRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGS-VYIWSVFTGKLEKVLSLSTSN 431 (459)
T ss_pred eeeccccc-----EEEEeeccccccccccceeEECCCCceeeeccCCCc-EEEEEccCceEEEEeccCCCC
Confidence 66777765 556665321 12678999999999999999999 999999999998888754433
No 86
>KOG0310|consensus
Probab=98.71 E-value=9.4e-08 Score=63.64 Aligned_cols=66 Identities=24% Similarity=0.468 Sum_probs=52.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCCC-cEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLKK-VQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~~-~~~~~~~~~~~~~~~ 76 (78)
.+ +||+.+.. ....+.+|++.|.|.+|+|. +..++||+-||. ||+||+++. ..+.++.++....++
T Consensus 135 ~k-~~d~s~a~-----v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~-vrl~DtR~~~~~v~elnhg~pVe~v 202 (487)
T KOG0310|consen 135 VK-YWDLSTAY-----VQAELSGHTDYVRCGDISPANDHIVVTGSYDGK-VRLWDTRSLTSRVVELNHGCPVESV 202 (487)
T ss_pred EE-EEEcCCcE-----EEEEecCCcceeEeeccccCCCeEEEecCCCce-EEEEEeccCCceeEEecCCCceeeE
Confidence 35 88987765 46688999999999999995 458899999999 999999986 677777755444433
No 87
>KOG2096|consensus
Probab=98.70 E-value=2e-08 Score=64.64 Aligned_cols=39 Identities=28% Similarity=0.535 Sum_probs=36.0
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
+.++.+|++.|++++|+.||++|+|++.|++ ||+||+++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~-Ir~w~~~D 117 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRS-IRLWDVRD 117 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCce-EEEEecch
Confidence 4456899999999999999999999999999 99999885
No 88
>KOG0772|consensus
Probab=98.69 E-value=3.1e-08 Score=66.79 Aligned_cols=59 Identities=19% Similarity=0.280 Sum_probs=45.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCcc--CEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC-cEEEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQS--ELACLALNQTGTMIATASSKGTLIRVWDTLKK-VQLVE 66 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~--~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~-~~~~~ 66 (78)
+| +||..+.. .....+.=.+|.+ .|.||+||+||++|++-+.|++ +++||++.- +++..
T Consensus 341 IQ-~W~~~~~~--v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~t-LKvWDLrq~kkpL~~ 402 (641)
T KOG0772|consen 341 IQ-IWDKGSRT--VRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDT-LKVWDLRQFKKPLNV 402 (641)
T ss_pred ee-eeecCCcc--cccceEeeeccCCCCceeEEEeccccchhhhccCCCc-eeeeeccccccchhh
Confidence 68 99986544 2233444458877 8999999999999999999999 999999864 34433
No 89
>KOG0295|consensus
Probab=98.69 E-value=4.3e-08 Score=63.63 Aligned_cols=66 Identities=29% Similarity=0.442 Sum_probs=60.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
.||+.++- ++++|++|...+..++-+.||+.+|+++.|.+ +++|-..++.+...++.|.-++. +.|
T Consensus 219 ~We~~tg~-----cv~t~~~h~ewvr~v~v~~DGti~As~s~dqt-l~vW~~~t~~~k~~lR~hEh~vEci~w 285 (406)
T KOG0295|consen 219 AWECDTGY-----CVKTFPGHSEWVRMVRVNQDGTIIASCSNDQT-LRVWVVATKQCKAELREHEHPVECIAW 285 (406)
T ss_pred EEecccce-----eEEeccCchHhEEEEEecCCeeEEEecCCCce-EEEEEeccchhhhhhhccccceEEEEe
Confidence 79998887 99999999999999999999999999999999 99999999988888988887766 444
No 90
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.68 E-value=9.7e-08 Score=41.04 Aligned_cols=37 Identities=32% Similarity=0.641 Sum_probs=33.6
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEee
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWD 57 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d 57 (78)
+...+..|...|.++.|++++..+++++.|+. +++||
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGT-IKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCe-EEEcC
Confidence 56677889999999999999999999999999 99996
No 91
>KOG0296|consensus
Probab=98.67 E-value=9.4e-08 Score=62.06 Aligned_cols=49 Identities=24% Similarity=0.363 Sum_probs=46.3
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
...+++.+|+.++++=.|.|||+.++++..|++ |++||+.++.++..+.
T Consensus 181 ~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgt-i~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 181 ALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGT-IIVWNPKTGQPLHKIT 229 (399)
T ss_pred ceeeEecCCCCCcccccccCCCceEEEEecCce-EEEEecCCCceeEEec
Confidence 388899999999999999999999999999999 9999999999988876
No 92
>KOG0305|consensus
Probab=98.66 E-value=1.1e-07 Score=63.98 Aligned_cols=66 Identities=26% Similarity=0.410 Sum_probs=58.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEE--cCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATA--SSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~--~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
|||..... ..+++..|.+.|.+++|+| ....||+| +.|+. |++||+.+|..+..+..+....+|.|
T Consensus 327 Iwd~~~~~-----p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~-i~fwn~~~g~~i~~vdtgsQVcsL~W 395 (484)
T KOG0305|consen 327 IWDGLSPE-----PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRC-IKFWNTNTGARIDSVDTGSQVCSLIW 395 (484)
T ss_pred eccCCCcc-----ccEEEeccceeeeEeeeCCCccCceEEcCCCcccE-EEEEEcCCCcEecccccCCceeeEEE
Confidence 88986555 8899999999999999999 67789886 67889 99999999999999988888888877
No 93
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.65 E-value=3.5e-07 Score=64.43 Aligned_cols=65 Identities=14% Similarity=0.272 Sum_probs=52.3
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC------cEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK------VQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~------~~~~~~~~~~~~~~ 75 (78)
+. +||+++.. ....++.+|...|.++.|. +++.|++++.|++ |++||++.+ ..+..+.+|...++
T Consensus 642 I~-iwD~~~~~----~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~-ikiWd~~~~~~~~~~~~l~~~~gh~~~i~ 712 (793)
T PLN00181 642 VY-YYDLRNPK----LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNT-LKLWDLSMSISGINETPLHSFMGHTNVKN 712 (793)
T ss_pred EE-EEECCCCC----ccceEecCCCCCEEEEEEe-CCCEEEEEECCCE-EEEEeCCCCccccCCcceEEEcCCCCCee
Confidence 56 89987653 3567788999999999997 7889999999999 999999743 56777877766544
No 94
>KOG0305|consensus
Probab=98.65 E-value=5.1e-08 Score=65.57 Aligned_cols=67 Identities=18% Similarity=0.399 Sum_probs=56.2
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
.+|++..+. ...++.+|..+|+.++|++|+++||+|+.|+. +.|||.....+...+..|.+.+. +.|
T Consensus 284 ~~dvR~~~~----~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~-~~Iwd~~~~~p~~~~~~H~aAVKA~aw 351 (484)
T KOG0305|consen 284 NHDVRISQH----VVSTLQGHRQEVCGLKWSPDGNQLASGGNDNV-VFIWDGLSPEPKFTFTEHTAAVKALAW 351 (484)
T ss_pred EEEEecchh----hhhhhhcccceeeeeEECCCCCeeccCCCccc-eEeccCCCccccEEEeccceeeeEeee
Confidence 678887762 23348899999999999999999999999999 99999988888888888877776 544
No 95
>KOG0283|consensus
Probab=98.64 E-value=3.8e-08 Score=68.36 Aligned_cols=39 Identities=28% Similarity=0.617 Sum_probs=34.7
Q ss_pred cEEec-CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 21 PVTIN-AHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 21 ~~~~~-~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.+.++ +|++.|+++.||+||++||+|++|+. ||||.+..
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~v-irVWkVie 298 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGV-IRVWKVIE 298 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCce-EEEEEEec
Confidence 34455 89999999999999999999999999 99998765
No 96
>KOG1332|consensus
Probab=98.62 E-value=1.5e-07 Score=58.79 Aligned_cols=71 Identities=17% Similarity=0.294 Sum_probs=55.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC--CCCEEEEEcCCCCEEEEeeCCCCc--EEEEeeCCCCCeE-EeC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ--TGTMIATASSKGTLIRVWDTLKKV--QLVELRRGSDPAT-LYW 78 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~--dg~~l~s~~~d~~~i~i~d~~~~~--~~~~~~~~~~~~~-~~w 78 (78)
++ ||+++++.+ .+.+.++.+|++|+..++|-. .|+.||+++.|+. |.||.-.+|+ ...+...|...++ +.|
T Consensus 35 Vk-If~v~~n~~--s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgk-VIiWke~~g~w~k~~e~~~h~~SVNsV~w 110 (299)
T KOG1332|consen 35 VK-IFEVRNNGQ--SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGK-VIIWKEENGRWTKAYEHAAHSASVNSVAW 110 (299)
T ss_pred EE-EEEEcCCCC--ceeeeEecCCCCCeeEEeecccccCcEeeEeecCce-EEEEecCCCchhhhhhhhhhcccceeecc
Confidence 45 788887763 358899999999999999944 7999999999999 9999988773 3445555666655 544
No 97
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.62 E-value=5.2e-07 Score=55.51 Aligned_cols=63 Identities=14% Similarity=0.096 Sum_probs=47.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEE-cCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATA-SSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~-~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+||+.+.. ....+ .+...+.+++|+|+|++|+++ +.++. |.+||+++++++..++.+..|-.+
T Consensus 233 v~d~~~~~-----~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~-i~v~d~~~~~~~~~~~~~~~~~~~ 296 (300)
T TIGR03866 233 VVDAKTYE-----VLDYL-LVGQRVWQLAFTPDEKYLLTTNGVSND-VSVIDVAALKVIKSIKVGRLPWGV 296 (300)
T ss_pred EEECCCCc-----EEEEE-EeCCCcceEEECCCCCEEEEEcCCCCe-EEEEECCCCcEEEEEEccccccee
Confidence 67775443 33333 244578899999999999886 56888 999999999999999877666543
No 98
>KOG1034|consensus
Probab=98.62 E-value=1.2e-07 Score=61.08 Aligned_cols=51 Identities=14% Similarity=0.328 Sum_probs=45.5
Q ss_pred eeeEEEcccCCcCCCCCcEEec---CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTIN---AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~---~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
+. +|++++.. ++..|. +|.++|.++.|+++|.++++++.|.+ +.+|++...
T Consensus 160 vR-lwnI~~~~-----Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhs-lk~W~l~~~ 213 (385)
T KOG1034|consen 160 VR-LWNIQTDV-----CVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHS-LKLWRLNVK 213 (385)
T ss_pred EE-EEeccCCe-----EEEEecccccccCcEEEEEEcCCCCeeeccCCcce-EEEEecChh
Confidence 45 89998876 888884 79999999999999999999999999 999999843
No 99
>KOG0293|consensus
Probab=98.61 E-value=9.8e-08 Score=63.07 Aligned_cols=59 Identities=22% Similarity=0.380 Sum_probs=50.2
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC---cEEEEeeCCCCCeE-EeC
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK---VQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~---~~~~~~~~~~~~~~-~~w 78 (78)
+..+.+..|.++|+-+.||++|++||+++.|.+ ..+|++..- +..+++.+|.+++. +.|
T Consensus 215 qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~T-aiiw~v~~d~~~kl~~tlvgh~~~V~yi~w 277 (519)
T KOG0293|consen 215 QTWQILQDHTDEVWFLQFSHNGKYLASASKDST-AIIWIVVYDVHFKLKKTLVGHSQPVSYIMW 277 (519)
T ss_pred hhhhhHhhCCCcEEEEEEcCCCeeEeeccCCce-EEEEEEecCcceeeeeeeecccCceEEEEE
Confidence 467788899999999999999999999999999 999986543 34678889999987 655
No 100
>KOG0639|consensus
Probab=98.61 E-value=7.2e-08 Score=65.10 Aligned_cols=68 Identities=19% Similarity=0.297 Sum_probs=54.7
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
|. |||+....+. ....+........+++.|||.+..+++..||. |+|||+.+...++.|++|.+.+.+
T Consensus 489 ls-iWDLAapTpr---ikaeltssapaCyALa~spDakvcFsccsdGn-I~vwDLhnq~~VrqfqGhtDGasc 556 (705)
T KOG0639|consen 489 LS-IWDLAAPTPR---IKAELTSSAPACYALAISPDAKVCFSCCSDGN-IAVWDLHNQTLVRQFQGHTDGASC 556 (705)
T ss_pred ee-eeeccCCCcc---hhhhcCCcchhhhhhhcCCccceeeeeccCCc-EEEEEcccceeeecccCCCCCcee
Confidence 56 9999887621 23334444456678999999999999999999 999999999999999999887653
No 101
>KOG0647|consensus
Probab=98.60 E-value=2.3e-07 Score=59.25 Aligned_cols=57 Identities=21% Similarity=0.257 Sum_probs=48.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCC--EEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGT--MIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~--~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
++ +||+.++ ....+..|.++|.++.|-+... .|+|||-|++ ++.||++....+..+.
T Consensus 96 ~k-~wDL~S~------Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKT-lKfWD~R~~~pv~t~~ 154 (347)
T KOG0647|consen 96 AK-LWDLASG------QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKT-LKFWDTRSSNPVATLQ 154 (347)
T ss_pred eE-EEEccCC------CeeeeeecccceeEEEEecCCCcceeEecccccc-eeecccCCCCeeeeee
Confidence 46 8999876 5677889999999999977655 8999999999 9999999887776664
No 102
>KOG0313|consensus
Probab=98.60 E-value=1.7e-07 Score=61.23 Aligned_cols=65 Identities=15% Similarity=0.262 Sum_probs=53.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCCCc-EEEEeeCCCCCe
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLKKV-QLVELRRGSDPA 74 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~~~-~~~~~~~~~~~~ 74 (78)
+||=+.++ ..-..++|-+|++.|.++.|+|. -..|++++.|++ +++||+++.+ +++.+.+|.+.+
T Consensus 326 l~DPR~~~--gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t-~klWDvRS~k~plydI~~h~DKv 392 (423)
T KOG0313|consen 326 LWDPRTGD--GSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNT-VKLWDVRSTKAPLYDIAGHNDKV 392 (423)
T ss_pred ecCCCCCC--CceeEEeeecchhhhhheecCCCCceEEEEEecCCe-EEEEEeccCCCcceeeccCCceE
Confidence 77877764 22467888999999999999994 568999999999 9999999887 889988875543
No 103
>KOG0278|consensus
Probab=98.58 E-value=1.4e-07 Score=59.19 Aligned_cols=59 Identities=19% Similarity=0.359 Sum_probs=50.7
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
+||+.+.+ -+...+.+|.+.|..+-|....+.+.+++.|++ ||+||.+++..++.+.-.
T Consensus 126 vfdln~p~----App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~t-VRLWD~rTgt~v~sL~~~ 184 (334)
T KOG0278|consen 126 VFDLNRPK----APPKEISGHTGGIRTVLWCHEDKCILSSADDKT-VRLWDHRTGTEVQSLEFN 184 (334)
T ss_pred hhhccCCC----CCchhhcCCCCcceeEEEeccCceEEeeccCCc-eEEEEeccCcEEEEEecC
Confidence 67776665 467778999999999999998899999999999 999999999888877643
No 104
>KOG0282|consensus
Probab=98.58 E-value=1.5e-08 Score=67.41 Aligned_cols=59 Identities=10% Similarity=0.348 Sum_probs=53.8
Q ss_pred CCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCC-CcEEEEeeCCCCCeE-EeC
Q psy1940 19 SSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLK-KVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~-~~~~~~~~~~~~~~~-~~w 78 (78)
+.++++.+|...|+++.|.| .+.+|++++.|+. |.||++.+ +.+++++.+|..+++ ++|
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~-vklW~vy~~~~~lrtf~gH~k~Vrd~~~ 266 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGL-VKLWNVYDDRRCLRTFKGHRKPVRDASF 266 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCce-EEEEEEecCcceehhhhcchhhhhhhhc
Confidence 57889999999999999999 8999999999999 99999887 899999999998876 554
No 105
>KOG0268|consensus
Probab=98.57 E-value=1.9e-07 Score=60.82 Aligned_cols=66 Identities=14% Similarity=0.243 Sum_probs=57.0
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCC-CEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTG-TMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg-~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
|||.+... ++..+.-..+.|.++.|+|-. ..|+++++|++ |.+||++.+.+++++-....+..+||
T Consensus 171 IWD~~R~~-----Pv~smswG~Dti~svkfNpvETsILas~~sDrs-IvLyD~R~~~Pl~KVi~~mRTN~Isw 237 (433)
T KOG0268|consen 171 IWDEQRDN-----PVSSMSWGADSISSVKFNPVETSILASCASDRS-IVLYDLRQASPLKKVILTMRTNTICW 237 (433)
T ss_pred ecccccCC-----ccceeecCCCceeEEecCCCcchheeeeccCCc-eEEEecccCCccceeeeeccccceec
Confidence 88887766 777888778899999999954 57777889999 99999999999998888888888888
No 106
>KOG0646|consensus
Probab=98.57 E-value=5e-08 Score=64.70 Aligned_cols=56 Identities=25% Similarity=0.559 Sum_probs=47.7
Q ss_pred CCcEEecCCcc--CEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 19 SSPVTINAHQS--ELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 19 ~~~~~~~~h~~--~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
.....+.+|.+ +|+|++.|-||+.|++|++||. +.|||+.+.++++++.....|++
T Consensus 266 t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~-VcvWdi~S~Q~iRtl~~~kgpVt 323 (476)
T KOG0646|consen 266 TQINVLVGHENESAITCLAISTDGTLLLSGDEDGK-VCVWDIYSKQCIRTLQTSKGPVT 323 (476)
T ss_pred ceeeeeccccCCcceeEEEEecCccEEEeeCCCCC-EEEEecchHHHHHHHhhhccccc
Confidence 35677889988 9999999999999999999999 99999999988887764444443
No 107
>KOG0308|consensus
Probab=98.57 E-value=3.4e-07 Score=63.03 Aligned_cols=69 Identities=22% Similarity=0.413 Sum_probs=57.3
Q ss_pred EEEcccCCc-----CCCCCcEEec-CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 7 SQDLSSTEL-----SSSSSPVTIN-AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 7 i~d~~~~~~-----~~~~~~~~~~-~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+||+..+.. .++.....+. ++..+|++++.++.|+.+++|+..+. +|+||.++++.+..+++|.+-+++
T Consensus 144 lWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~-lr~wDprt~~kimkLrGHTdNVr~ 218 (735)
T KOG0308|consen 144 LWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD-LRLWDPRTCKKIMKLRGHTDNVRV 218 (735)
T ss_pred EEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc-eEEeccccccceeeeeccccceEE
Confidence 799885521 2333444444 89999999999999999999999999 999999999999999999988774
No 108
>KOG0640|consensus
Probab=98.55 E-value=1e-07 Score=61.37 Aligned_cols=66 Identities=20% Similarity=0.381 Sum_probs=51.7
Q ss_pred eeeEEEcccCCcCCCCCcEE---ecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVT---INAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~---~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+. +||+.+.. +... -..|++.|++|.+|+.|+..++++.||. |++||--+++|+.++...++...+
T Consensus 240 ~r-lYdv~T~Q-----cfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~-IklwDGVS~rCv~t~~~AH~gsev 308 (430)
T KOG0640|consen 240 LR-LYDVNTYQ-----CFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGA-IKLWDGVSNRCVRTIGNAHGGSEV 308 (430)
T ss_pred ee-EEecccee-----EeeecCcccccccceeEEEecCCccEEEEeccCCc-EEeeccccHHHHHHHHhhcCCcee
Confidence 34 77776654 2111 1479999999999999999999999999 999998899999888765555444
No 109
>KOG0270|consensus
Probab=98.55 E-value=4.7e-07 Score=59.95 Aligned_cols=69 Identities=14% Similarity=0.238 Sum_probs=53.7
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCC-CcEEEEeeCCCCCeEEeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLK-KVQLVELRRGSDPATLYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~-~~~~~~~~~~~~~~~~~w 78 (78)
.+. +||+..+. +..++..|.++|.++.|.| .+..|++|+.|++ +++.|.|. +..-..++-..+..++.|
T Consensus 267 TV~-lWD~~~g~-----p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~-V~l~D~R~~~~s~~~wk~~g~VEkv~w 337 (463)
T KOG0270|consen 267 TVK-LWDVDTGK-----PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGT-VALKDCRDPSNSGKEWKFDGEVEKVAW 337 (463)
T ss_pred eEE-EEEcCCCC-----cceehhhcCCceeEEEecCCCceEEEeccccce-EEeeeccCccccCceEEeccceEEEEe
Confidence 356 99999886 8888988999999999998 5789999999999 99999993 333344444445555555
No 110
>KOG0318|consensus
Probab=98.55 E-value=4e-07 Score=61.52 Aligned_cols=57 Identities=25% Similarity=0.432 Sum_probs=47.5
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee---CCCCCe-EEeC
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR---RGSDPA-TLYW 78 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~---~~~~~~-~~~w 78 (78)
..+++.|..-|+|+.|||||+++++++.|+. +.+||=.+|+.+.++. +|...+ .|.|
T Consensus 183 k~s~r~HskFV~~VRysPDG~~Fat~gsDgk-i~iyDGktge~vg~l~~~~aHkGsIfalsW 243 (603)
T KOG0318|consen 183 KSSFREHSKFVNCVRYSPDGSRFATAGSDGK-IYIYDGKTGEKVGELEDSDAHKGSIFALSW 243 (603)
T ss_pred eecccccccceeeEEECCCCCeEEEecCCcc-EEEEcCCCccEEEEecCCCCccccEEEEEE
Confidence 3445678999999999999999999999999 9999999999999998 554443 2444
No 111
>KOG0973|consensus
Probab=98.53 E-value=1.8e-07 Score=66.54 Aligned_cols=58 Identities=14% Similarity=0.304 Sum_probs=52.5
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
+...+++|.+.|..+.|+|++.+|++++-|++ |.|||.++.+.+..+++|+..+. +.|
T Consensus 121 ~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~Dns-Viiwn~~tF~~~~vl~~H~s~VKGvs~ 179 (942)
T KOG0973|consen 121 VVSILRGHDSDVLDVNWSPDDSLLVSVSLDNS-VIIWNAKTFELLKVLRGHQSLVKGVSW 179 (942)
T ss_pred EEEEEecCCCccceeccCCCccEEEEecccce-EEEEccccceeeeeeecccccccceEE
Confidence 56778999999999999999999999999999 99999999999999999887664 544
No 112
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.53 E-value=9.2e-07 Score=53.27 Aligned_cols=64 Identities=16% Similarity=0.366 Sum_probs=47.8
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCC---CCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSK---GTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d---~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
++ +||++ . +.+..+. ..+++.|.|||+|++|+.++.+ |. +.+||+++.+.+.+.++. ....+.|
T Consensus 85 v~-lyd~~-~-----~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~-l~~wd~~~~~~i~~~~~~-~~t~~~W 151 (194)
T PF08662_consen 85 VT-LYDVK-G-----KKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGD-LEFWDVRKKKKISTFEHS-DATDVEW 151 (194)
T ss_pred cE-EEcCc-c-----cEeEeec--CCCceEEEECCCCCEEEEEEccCCCcE-EEEEECCCCEEeeccccC-cEEEEEE
Confidence 45 77874 2 3555553 5678999999999999998744 67 999999988888887643 4455666
No 113
>KOG1034|consensus
Probab=98.50 E-value=3e-07 Score=59.31 Aligned_cols=50 Identities=12% Similarity=0.308 Sum_probs=45.3
Q ss_pred CCcEEecCCccCEEEEEECCCC-CEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 19 SSPVTINAHQSELACLALNQTG-TMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg-~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
++...+.+|.+.|+.|.|.|+. ++++++|+|.+ ||+|++++..|+..+-+
T Consensus 126 ~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~s-vRlwnI~~~~Cv~VfGG 176 (385)
T KOG1034|consen 126 QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHS-VRLWNIQTDVCVAVFGG 176 (385)
T ss_pred hhccceeccCccchhhhcCCCCCcEEEEecCCce-EEEEeccCCeEEEEecc
Confidence 3888899999999999999964 79999999999 99999999999988854
No 114
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.50 E-value=1.5e-06 Score=53.46 Aligned_cols=65 Identities=25% Similarity=0.315 Sum_probs=48.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEE-EEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMI-ATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l-~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+. +||+.+.. ..+.+..+.. +.+++|+|+|+.+ ++++.++. +++||..+++.+..+..+..+..+
T Consensus 13 v~-~~d~~t~~-----~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~~~~~~~~~ 78 (300)
T TIGR03866 13 IS-VIDTATLE-----VTRTFPVGQR-PRGITLSKDGKLLYVCASDSDT-IQVIDLATGEVIGTLPSGPDPELF 78 (300)
T ss_pred EE-EEECCCCc-----eEEEEECCCC-CCceEECCCCCEEEEEECCCCe-EEEEECCCCcEEEeccCCCCccEE
Confidence 44 78876654 7777776644 5779999999976 56678888 999999999887777665555444
No 115
>KOG1274|consensus
Probab=98.48 E-value=4.5e-07 Score=64.17 Aligned_cols=57 Identities=18% Similarity=0.397 Sum_probs=48.6
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+.++.+.+ ..+++++|+++|.++.|+|.|++||+++.||. ++|||+.++.+...+.+
T Consensus 122 ~~~~~D~s-----~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~-v~iw~~~~~~~~~tl~~ 178 (933)
T KOG1274|consen 122 LLNLDDSS-----QEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGK-VQIWDLQDGILSKTLTG 178 (933)
T ss_pred EEeccccc-----hheeecccCCceeeeeEcCCCCEEEEEecCce-EEEEEcccchhhhhccc
Confidence 34554444 88899999999999999999999999999999 99999999987666653
No 116
>KOG0300|consensus
Probab=98.47 E-value=6.1e-07 Score=58.08 Aligned_cols=59 Identities=20% Similarity=0.386 Sum_probs=48.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC-CcEEEEeeCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK-KVQLVELRRGS 71 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~-~~~~~~~~~~~ 71 (78)
+||.+... ..+.+|++|...|.++.|+.|. .+++++.|.+ |++||+++ ...+.+++..+
T Consensus 340 LWDFReaI----~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrT-vKvWdLrNMRsplATIRtdS 399 (481)
T KOG0300|consen 340 LWDFREAI----QSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRT-VKVWDLRNMRSPLATIRTDS 399 (481)
T ss_pred eccchhhc----ceeeeecccccceeEEEEecCC-ceeecCCCce-EEEeeeccccCcceeeecCC
Confidence 79988655 4788899999999999999764 6889999999 99999986 45666666443
No 117
>KOG0299|consensus
Probab=98.47 E-value=2.9e-07 Score=61.15 Aligned_cols=49 Identities=18% Similarity=0.375 Sum_probs=46.0
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+|-..+.+++.|+||++|++|+.|.. |.|||.++.+.++.+.+|.+++.
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~-v~Iw~~~t~ehv~~~~ghr~~V~ 248 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRH-VQIWDCDTLEHVKVFKGHRGAVS 248 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCce-EEEecCcccchhhccccccccee
Confidence 88899999999999999999999999 99999999999999999987764
No 118
>KOG0267|consensus
Probab=98.46 E-value=1.4e-07 Score=65.56 Aligned_cols=66 Identities=17% Similarity=0.313 Sum_probs=58.5
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
++ +||+.... .++++.+|...+.++.|+|-|.+.++++.|.. +.+||++.-.|.+.+.+|...+++
T Consensus 94 iK-~wDleeAk-----~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd-~~iwD~Rk~Gc~~~~~s~~~vv~~ 159 (825)
T KOG0267|consen 94 IK-VWDLEEAK-----IVRTLTGHLLNITSVDFHPYGEFFASGSTDTD-LKIWDIRKKGCSHTYKSHTRVVDV 159 (825)
T ss_pred ee-eeehhhhh-----hhhhhhccccCcceeeeccceEEecccccccc-ceehhhhccCceeeecCCcceeEE
Confidence 57 89998664 89999999999999999999999999999999 999999987788888887666654
No 119
>KOG0641|consensus
Probab=98.45 E-value=2.6e-06 Score=53.16 Aligned_cols=66 Identities=12% Similarity=0.254 Sum_probs=52.6
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC----cEEEEeeCCC-CCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK----VQLVELRRGS-DPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~----~~~~~~~~~~-~~~~~~w 78 (78)
+||++-+. .++.|..|...|.|+.|||...++.+++.|.. |++-|++.. -.+.....|. +.+++.|
T Consensus 257 lydirg~r-----~iq~f~phsadir~vrfsp~a~yllt~syd~~-ikltdlqgdla~el~~~vv~ehkdk~i~~rw 327 (350)
T KOG0641|consen 257 LYDIRGGR-----MIQRFHPHSADIRCVRFSPGAHYLLTCSYDMK-IKLTDLQGDLAHELPIMVVAEHKDKAIQCRW 327 (350)
T ss_pred EEEeeCCc-----eeeeeCCCccceeEEEeCCCceEEEEecccce-EEEeecccchhhcCceEEEEeccCceEEEEe
Confidence 79998775 88899999999999999999999999999999 999998732 2333333444 4456777
No 120
>KOG1272|consensus
Probab=98.45 E-value=2.6e-07 Score=61.69 Aligned_cols=51 Identities=24% Similarity=0.428 Sum_probs=44.7
Q ss_pred CCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 18 SSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 18 ~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
...+..+..|.++|++|++.++|.+++|.+.|.. ++|||++.-..+..++.
T Consensus 283 kePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~-~kIWDlR~~~ql~t~~t 333 (545)
T KOG1272|consen 283 KEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRK-VKIWDLRNFYQLHTYRT 333 (545)
T ss_pred cchHHHHHhcCCCcceEEECCCCcEEeecccccc-eeEeeeccccccceeec
Confidence 3466667789999999999999999999999999 99999998877766654
No 121
>KOG0289|consensus
Probab=98.44 E-value=8.5e-07 Score=58.89 Aligned_cols=46 Identities=17% Similarity=0.484 Sum_probs=42.8
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
-.+.+.+|.|||..|++|..|+. ++|||+.++..+..|++|..+++
T Consensus 348 v~~ts~~fHpDgLifgtgt~d~~-vkiwdlks~~~~a~Fpght~~vk 393 (506)
T KOG0289|consen 348 VEYTSAAFHPDGLIFGTGTPDGV-VKIWDLKSQTNVAKFPGHTGPVK 393 (506)
T ss_pred ceeEEeeEcCCceEEeccCCCce-EEEEEcCCccccccCCCCCCcee
Confidence 35889999999999999999999 99999999999999999998876
No 122
>KOG0294|consensus
Probab=98.44 E-value=9e-07 Score=56.85 Aligned_cols=66 Identities=15% Similarity=0.331 Sum_probs=56.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
+||+.+-. ++.++++|++.|+.++..|.|+...+.+.|+. +|.||+-.|+.-+.++-...+..+.|
T Consensus 111 iw~~~~W~-----~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~-lr~WNLV~Gr~a~v~~L~~~at~v~w 176 (362)
T KOG0294|consen 111 IWRVGSWE-----LLKSLKAHKGQVTDLSIHPSGKLALSVGGDQV-LRTWNLVRGRVAFVLNLKNKATLVSW 176 (362)
T ss_pred EEEcCCeE-----EeeeecccccccceeEecCCCceEEEEcCCce-eeeehhhcCccceeeccCCcceeeEE
Confidence 88887776 99999999999999999999999999999999 99999998887666665555544555
No 123
>KOG0290|consensus
Probab=98.42 E-value=6.4e-07 Score=57.18 Aligned_cols=52 Identities=17% Similarity=0.277 Sum_probs=46.5
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.++ |.|++..+ ..+..+++|++.|+.|+|-| ..+++.|++.|.. +.+||+..
T Consensus 267 ~V~-iLDiR~P~----tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~q-aliWDl~q 319 (364)
T KOG0290|consen 267 KVV-ILDIRVPC----TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQ-ALIWDLQQ 319 (364)
T ss_pred eEE-EEEecCCC----cceehhhcCcccccceEecCCCCceeeecCCcce-EEEEeccc
Confidence 467 88999887 68899999999999999999 5789999999999 99999874
No 124
>KOG0642|consensus
Probab=98.42 E-value=4.7e-07 Score=61.35 Aligned_cols=52 Identities=21% Similarity=0.403 Sum_probs=44.0
Q ss_pred EEEc---ccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 7 SQDL---SSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 7 i~d~---~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
+|.+ ......+.+.+.+|++|.+||.|+..++.+.++++|+-||+ |++|++.
T Consensus 320 ~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~-I~~w~~p 374 (577)
T KOG0642|consen 320 LWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGT-IRCWNLP 374 (577)
T ss_pred hhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCce-eeeeccC
Confidence 6777 33334556689999999999999999999999999999999 9999544
No 125
>KOG1007|consensus
Probab=98.41 E-value=4.5e-07 Score=57.87 Aligned_cols=62 Identities=31% Similarity=0.463 Sum_probs=49.1
Q ss_pred eeeEEEcccCCcCCCCCcEEe-cCCccCEEEEEECCCC-CEEEEEcCCCCEEEEeeCCCC-cEEEEeeCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTI-NAHQSELACLALNQTG-TMIATASSKGTLIRVWDTLKK-VQLVELRRGSD 72 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~-~~h~~~i~~v~fs~dg-~~l~s~~~d~~~i~i~d~~~~-~~~~~~~~~~~ 72 (78)
++ .||+++-. +...+ ++|...+..+.|+|.- ..|++++.||. |++||.+.. .++.++++|..
T Consensus 195 l~-~~D~RT~~-----~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgy-vriWD~R~tk~pv~el~~HsH 259 (370)
T KOG1007|consen 195 LQ-FWDLRTMK-----KNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGY-VRIWDTRKTKFPVQELPGHSH 259 (370)
T ss_pred EE-EEEccchh-----hhcchhhhhcceeeeccCCCCceEEEEEcCCCcc-EEEEeccCCCccccccCCCce
Confidence 57 79998654 44444 5899999999999976 47889999999 999999864 57777777654
No 126
>KOG0268|consensus
Probab=98.40 E-value=1.7e-07 Score=61.10 Aligned_cols=51 Identities=16% Similarity=0.200 Sum_probs=46.0
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
+||++... ..+.++.+|.+.|.+|.|||.|+-+++||.|++ ||||.++.+.
T Consensus 255 ~~DmR~l~----~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDks-IRIf~~~~~~ 305 (433)
T KOG0268|consen 255 TYDMRNLS----RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKS-IRIFPVNHGH 305 (433)
T ss_pred ehhhhhhc----ccchhhcccceeEEEeccCCCcchhccccccce-EEEeecCCCc
Confidence 46888876 688888999999999999999999999999999 9999998764
No 127
>KOG1538|consensus
Probab=98.40 E-value=5.9e-07 Score=62.64 Aligned_cols=47 Identities=19% Similarity=0.405 Sum_probs=43.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
+||..+++ ..+++.+|++.|++++|+.||+.+|+|+.|+. |.+|...
T Consensus 37 iyD~ndG~-----llqtLKgHKDtVycVAys~dGkrFASG~aDK~-VI~W~~k 83 (1081)
T KOG1538|consen 37 VYDTSDGT-----LLQPLKGHKDTVYCVAYAKDGKRFASGSADKS-VIIWTSK 83 (1081)
T ss_pred EEeCCCcc-----cccccccccceEEEEEEccCCceeccCCCcee-EEEeccc
Confidence 67877766 99999999999999999999999999999999 9999765
No 128
>KOG0643|consensus
Probab=98.39 E-value=7.1e-07 Score=56.40 Aligned_cols=60 Identities=17% Similarity=0.125 Sum_probs=52.0
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+. +||++++. +.+..-+.|...|+.+.|+||.++++|++.|.+ .++||.++-++++++..
T Consensus 171 is-~~da~~g~----~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dtt-akl~D~~tl~v~Kty~t 230 (327)
T KOG0643|consen 171 IS-IYDARTGK----ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTT-AKLVDVRTLEVLKTYTT 230 (327)
T ss_pred EE-EEEcccCc----eeeechhhhccccccccccCCcceEEecccCcc-ceeeeccceeeEEEeee
Confidence 45 79998865 366666789999999999999999999999999 99999999998888764
No 129
>KOG1445|consensus
Probab=98.38 E-value=6.8e-07 Score=62.02 Aligned_cols=66 Identities=17% Similarity=0.378 Sum_probs=54.5
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC-CcEEEEeeCCCCC--eEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK-KVQLVELRRGSDP--ATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~-~~~~~~~~~~~~~--~~~~w 78 (78)
|||+.... ....+.+|...|-+..|+.||+.|++++.|+. |+|||.+. ++.++..++|... .++.|
T Consensus 154 i~D~stqk-----~~~el~~h~d~vQSa~WseDG~llatscKdkq-irifDPRa~~~piQ~te~H~~~rdsRv~w 222 (1012)
T KOG1445|consen 154 ITDISTQK-----TAVELSGHTDKVQSADWSEDGKLLATSCKDKQ-IRIFDPRASMEPIQTTEGHGGMRDSRVLW 222 (1012)
T ss_pred EEEcccCc-----eeecccCCchhhhccccccCCceEeeecCCcc-eEEeCCccCCCccccccccccchhheeee
Confidence 78987765 78888999999999999999999999999999 99999885 4677777766443 33555
No 130
>KOG0313|consensus
Probab=98.37 E-value=1.8e-06 Score=56.50 Aligned_cols=67 Identities=21% Similarity=0.374 Sum_probs=53.2
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc---EEEEeeCCCCCeE-EeC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKV---QLVELRRGSDPAT-LYW 78 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~---~~~~~~~~~~~~~-~~w 78 (78)
+. .||+..+. +.-++. ...++++|..+|..++|++|+.|.. +|+||.+++. ..+.+.+|.+.+. +.|
T Consensus 283 Ik-~WDletg~-----~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~-irl~DPR~~~gs~v~~s~~gH~nwVssvkw 353 (423)
T KOG0313|consen 283 IK-VWDLETGG-----LKSTLT-TNKSLNCISYSPLSKLLASGSSDRH-IRLWDPRTGDGSVVSQSLIGHKNWVSSVKW 353 (423)
T ss_pred EE-EEEeeccc-----ceeeee-cCcceeEeecccccceeeecCCCCc-eeecCCCCCCCceeEEeeecchhhhhheec
Confidence 56 89998876 555554 3457899999999999999999999 9999999762 4577788877665 555
No 131
>KOG1009|consensus
Probab=98.37 E-value=7.2e-07 Score=58.63 Aligned_cols=58 Identities=17% Similarity=0.361 Sum_probs=51.1
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
..+.+++|...|..++|+||+.++++++.|.. +++||+..|..+..+..|..-++ ++|
T Consensus 115 v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns-~~l~Dv~~G~l~~~~~dh~~yvqgvaw 173 (434)
T KOG1009|consen 115 VKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNS-VRLWDVHAGQLLAILDDHEHYVQGVAW 173 (434)
T ss_pred EEEEecccccchhhhhccCCCceeeeeeccce-EEEEEeccceeEeeccccccccceeec
Confidence 35667899999999999999999999999999 99999999999999887766555 666
No 132
>KOG1446|consensus
Probab=98.36 E-value=3e-06 Score=54.09 Aligned_cols=53 Identities=15% Similarity=0.327 Sum_probs=45.8
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
..+.|+.-.+.|+++.|+++|.+|+++++|.+ +++||..+|+++.++...+..
T Consensus 6 ~ak~f~~~~~~i~sl~fs~~G~~litss~dDs-l~LYd~~~g~~~~ti~skkyG 58 (311)
T KOG1446|consen 6 PAKVFRETNGKINSLDFSDDGLLLITSSEDDS-LRLYDSLSGKQVKTINSKKYG 58 (311)
T ss_pred cccccccCCCceeEEEecCCCCEEEEecCCCe-EEEEEcCCCceeeEeeccccc
Confidence 55667767889999999999999999999999 999999999999888765433
No 133
>KOG0646|consensus
Probab=98.36 E-value=8.8e-07 Score=58.93 Aligned_cols=63 Identities=25% Similarity=0.318 Sum_probs=52.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC---------CcEEEEeeCCCCCeE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK---------KVQLVELRRGSDPAT 75 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~---------~~~~~~~~~~~~~~~ 75 (78)
+|.+.++. .+.++.+|=..|+|+.|+.||.+|.||+.||. |.+|++.+ -+.++.+..|.-+++
T Consensus 107 lWelssG~-----LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~-V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsIT 178 (476)
T KOG0646|consen 107 LWELSSGI-----LLNVLSAHYQSITCLKFSDDGSHIITGSKDGA-VLVWLLTDLVSADNDHSVKPLHIFSDHTLSIT 178 (476)
T ss_pred EEEecccc-----HHHHHHhhccceeEEEEeCCCcEEEecCCCcc-EEEEEEEeecccccCCCccceeeeccCcceeE
Confidence 78888876 88888999999999999999999999999999 99997542 245667777765554
No 134
>KOG0771|consensus
Probab=98.35 E-value=5.6e-07 Score=59.00 Aligned_cols=57 Identities=21% Similarity=0.312 Sum_probs=46.0
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEe
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~ 67 (78)
|+. +|+.-+.. ....+..|..+|.++.|||||+.|++-+.| . .+|||+++|.++...
T Consensus 167 ~lR-v~~~Ps~~-----t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~-~~VW~~~~g~~~a~~ 223 (398)
T KOG0771|consen 167 TLR-VWEWPSML-----TILEEIAHHAEVKDLDFSPDGKFLASIGAD-S-ARVWSVNTGAALARK 223 (398)
T ss_pred eEE-EEecCcch-----hhhhhHhhcCccccceeCCCCcEEEEecCC-c-eEEEEeccCchhhhc
Confidence 566 77754443 555667899999999999999999999999 6 999999999655444
No 135
>KOG0299|consensus
Probab=98.34 E-value=3.7e-07 Score=60.62 Aligned_cols=64 Identities=19% Similarity=0.274 Sum_probs=56.2
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
+| |||.++.+ .+++|.+|.++|.+++|-..-..|++++.|.+ +++|++..-..+.++.+|++.+
T Consensus 226 v~-Iw~~~t~e-----hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drs-vkvw~~~~~s~vetlyGHqd~v 289 (479)
T KOG0299|consen 226 VQ-IWDCDTLE-----HVKVFKGHRGAVSSLAFRKGTSELYSASADRS-VKVWSIDQLSYVETLYGHQDGV 289 (479)
T ss_pred EE-EecCcccc-----hhhcccccccceeeeeeecCccceeeeecCCc-eEEEehhHhHHHHHHhCCccce
Confidence 46 99999887 88889999999999999988889999999999 9999998777777777776554
No 136
>KOG0640|consensus
Probab=98.34 E-value=9.2e-07 Score=57.04 Aligned_cols=58 Identities=24% Similarity=0.338 Sum_probs=50.0
Q ss_pred EEEcccCCcCCCCCcEEec-CCc-cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 7 SQDLSSTELSSSSSPVTIN-AHQ-SELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~-~h~-~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
|||--++. |+.+|. +|. .+|.+..|..+|+++.+++.|.. +++|.+.+|+++.++-+.
T Consensus 287 lwDGVS~r-----Cv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~-vkLWEi~t~R~l~~YtGA 346 (430)
T KOG0640|consen 287 LWDGVSNR-----CVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDST-VKLWEISTGRMLKEYTGA 346 (430)
T ss_pred eeccccHH-----HHHHHHhhcCCceeeeEEEccCCeEEeecCCcce-eeeeeecCCceEEEEecC
Confidence 77765554 888886 674 47999999999999999999999 999999999999998764
No 137
>KOG0269|consensus
Probab=98.33 E-value=7.5e-07 Score=62.29 Aligned_cols=69 Identities=19% Similarity=0.330 Sum_probs=56.3
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
+||+.... .++....|..|+-.++++.|++ ....|++|+.||+ |++||++..+....+++....++ +.|
T Consensus 114 vWdlnk~~--rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~-vK~~DlR~~~S~~t~~~nSESiRDV~f 184 (839)
T KOG0269|consen 114 VWDLNKSI--RNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGT-VKCWDLRSKKSKSTFRSNSESIRDVKF 184 (839)
T ss_pred EEecCccc--cchhhhHhhhhccceeeeeeccCCccEEEecCCCce-EEEEeeecccccccccccchhhhceee
Confidence 79987632 3367788999999999999988 5689999999999 99999999888888877666554 443
No 138
>KOG0292|consensus
Probab=98.32 E-value=3.3e-06 Score=60.33 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=56.2
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
++ +|...+.. +..++.+|-+.|..+.|.+.=-++.++|.|.+ ||||+-.++.++..+.+|...
T Consensus 75 Ik-VWnYk~rr-----clftL~GHlDYVRt~~FHheyPWIlSASDDQT-IrIWNwqsr~~iavltGHnHY 137 (1202)
T KOG0292|consen 75 IK-VWNYKTRR-----CLFTLLGHLDYVRTVFFHHEYPWILSASDDQT-IRIWNWQSRKCIAVLTGHNHY 137 (1202)
T ss_pred EE-EEecccce-----ehhhhccccceeEEeeccCCCceEEEccCCCe-EEEEeccCCceEEEEecCceE
Confidence 45 77776654 99999999999999999999999999999999 999999999999999987543
No 139
>KOG0290|consensus
Probab=98.31 E-value=5.1e-06 Score=53.18 Aligned_cols=69 Identities=17% Similarity=0.275 Sum_probs=48.4
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCC-CEEEEEcCCCCEEEEeeCCCCcE---EEEeeC-CCCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTG-TMIATASSKGTLIRVWDTLKKVQ---LVELRR-GSDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg-~~l~s~~~d~~~i~i~d~~~~~~---~~~~~~-~~~~~~~~w 78 (78)
|||+..+... .....+=+|..+|..|+|..+| ..+|+.+.||+ +|+||+++-.. +.+-+. +..-.+|.|
T Consensus 177 iWdie~~~~~--~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGS-vRmFDLR~leHSTIIYE~p~~~~pLlRLsw 250 (364)
T KOG0290|consen 177 IWDIETGVSG--TVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGS-VRMFDLRSLEHSTIIYEDPSPSTPLLRLSW 250 (364)
T ss_pred EEEEeecccc--ceeeEEEecCcceeEEEeccCccceEEEecCCCc-EEEEEecccccceEEecCCCCCCcceeecc
Confidence 8999876311 1234455899999999999865 58999999999 99999997543 233333 223355665
No 140
>KOG2096|consensus
Probab=98.30 E-value=9.2e-07 Score=57.13 Aligned_cols=52 Identities=23% Similarity=0.325 Sum_probs=42.6
Q ss_pred EEEccc---CCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 7 SQDLSS---TELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 7 i~d~~~---~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
+|++-- ++-++.+.+..+.+|+..|...+||++.+.++|.+.||. +|+||+.
T Consensus 254 VwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~-wriwdtd 308 (420)
T KOG2096|consen 254 VWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGK-WRIWDTD 308 (420)
T ss_pred EEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCc-EEEeecc
Confidence 555432 333445567778899999999999999999999999999 9999976
No 141
>KOG2139|consensus
Probab=98.29 E-value=5.3e-06 Score=54.36 Aligned_cols=53 Identities=25% Similarity=0.448 Sum_probs=42.3
Q ss_pred cCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe-EEeC
Q psy1940 25 NAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA-TLYW 78 (78)
Q Consensus 25 ~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~-~~~w 78 (78)
++| .+|.++.|++||..+++++.+...|+|||+.++.++...+.+...+ .|+|
T Consensus 193 pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkw 246 (445)
T KOG2139|consen 193 PGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKW 246 (445)
T ss_pred CCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEE
Confidence 456 6899999999999999999887669999999998776665544444 3665
No 142
>KOG0641|consensus
Probab=98.29 E-value=9.3e-06 Score=50.72 Aligned_cols=66 Identities=17% Similarity=0.270 Sum_probs=55.0
Q ss_pred eeeEEEcccCCcCCCCCcEEecC--C-----ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINA--H-----QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~--h-----~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+. .||++-+. ++.++.. | ...|.+++..|.|++|+++-.|.+ ..+||++.++.++.+..|...+++
T Consensus 206 ir-fwdlrv~~-----~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dss-c~lydirg~r~iq~f~phsadir~ 278 (350)
T KOG0641|consen 206 IR-FWDLRVNS-----CVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSS-CMLYDIRGGRMIQRFHPHSADIRC 278 (350)
T ss_pred EE-EEeeeccc-----eeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCc-eEEEEeeCCceeeeeCCCccceeE
Confidence 45 89998876 7776642 2 356889999999999999999999 999999999999999888777663
No 143
>KOG0306|consensus
Probab=98.28 E-value=2.2e-06 Score=60.07 Aligned_cols=54 Identities=11% Similarity=0.194 Sum_probs=49.2
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
-..++.||+-||.|+..|||++.++|||.|+. |++|-+.=|.|.+.+.+|.+.+
T Consensus 542 FflsLYGHkLPV~smDIS~DSklivTgSADKn-VKiWGLdFGDCHKS~fAHdDSv 595 (888)
T KOG0306|consen 542 FFLSLYGHKLPVLSMDISPDSKLIVTGSADKN-VKIWGLDFGDCHKSFFAHDDSV 595 (888)
T ss_pred eeeeecccccceeEEeccCCcCeEEeccCCCc-eEEeccccchhhhhhhcccCce
Confidence 55567899999999999999999999999999 9999999899999999888774
No 144
>KOG0300|consensus
Probab=98.27 E-value=9.4e-07 Score=57.24 Aligned_cols=46 Identities=22% Similarity=0.384 Sum_probs=43.0
Q ss_pred eEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEee
Q psy1940 6 CSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWD 57 (78)
Q Consensus 6 ~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d 57 (78)
|||.+.++. |+.++.+|.+.|++|+|++.|.++++++.|++ ..||.
T Consensus 173 ~iWs~Esg~-----CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~t-aHIW~ 218 (481)
T KOG0300|consen 173 RIWSLESGA-----CLATYTGHTGSVNSIKFHNSGLLLLTASGDET-AHIWK 218 (481)
T ss_pred eEEeecccc-----ceeeecccccceeeEEeccccceEEEccCCcc-hHHHH
Confidence 489988876 99999999999999999999999999999999 99996
No 145
>KOG1310|consensus
Probab=98.27 E-value=1.5e-06 Score=59.43 Aligned_cols=52 Identities=23% Similarity=0.479 Sum_probs=45.8
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSD 72 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~ 72 (78)
..+.+.||++=|+++.|+.||.+|++|+.|-. +.|||.-..+.++.+..++.
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r-~ivWd~~~~KllhsI~TgHt 93 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTR-LIVWDPFEYKLLHSISTGHT 93 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcce-EEeecchhcceeeeeecccc
Confidence 45567899999999999999999999999999 99999988888888875543
No 146
>KOG2048|consensus
Probab=98.23 E-value=4.9e-06 Score=57.53 Aligned_cols=43 Identities=35% Similarity=0.506 Sum_probs=37.8
Q ss_pred EEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEE
Q psy1940 22 VTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLV 65 (78)
Q Consensus 22 ~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~ 65 (78)
..|...++.|.+++|+|+|..+++|+.||. |++||+.++.-++
T Consensus 148 r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~-Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 148 RSLMRQKSRVLSLSWNPTGTKIAGGSIDGV-IRIWDVKSGQTLH 190 (691)
T ss_pred eecccccceEEEEEecCCccEEEecccCce-EEEEEcCCCceEE
Confidence 344556789999999999999999999999 9999999987766
No 147
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.20 E-value=2.5e-05 Score=48.42 Aligned_cols=63 Identities=32% Similarity=0.508 Sum_probs=52.7
Q ss_pred EEEccc-CCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcC-CCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 7 SQDLSS-TELSSSSSPVTINAHQSELACLALNQTGTMIATASS-KGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 7 i~d~~~-~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~-d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+||... . .....+..|...|..++|+|++..+++++. |+. +++|++..+..+..+..|...+.
T Consensus 138 ~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~ 202 (466)
T COG2319 138 LWDLSTPG-----KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGT-IKLWDLRTGKPLSTLAGHTDPVS 202 (466)
T ss_pred EEEecCCC-----eEEEEEecCcccEEEEEECCCCCEEEecCCCCCc-eEEEEcCCCceEEeeccCCCceE
Confidence 677665 3 377778899999999999999998998886 999 99999998888888887666654
No 148
>KOG0973|consensus
Probab=98.19 E-value=6.2e-06 Score=59.08 Aligned_cols=55 Identities=20% Similarity=0.229 Sum_probs=47.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEe
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~ 67 (78)
+|+.++.. ..+++++|++.|-.++|.|-|++||+-+.|++ ++||++.+-...+.+
T Consensus 155 iwn~~tF~-----~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt-ikvwrt~dw~i~k~I 209 (942)
T KOG0973|consen 155 IWNAKTFE-----LLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT-LKVWRTSDWGIEKSI 209 (942)
T ss_pred EEccccce-----eeeeeecccccccceEECCccCeeeeecCCce-EEEEEcccceeeEee
Confidence 78887775 99999999999999999999999999999999 999997765444443
No 149
>KOG1188|consensus
Probab=98.18 E-value=3.7e-06 Score=54.45 Aligned_cols=52 Identities=17% Similarity=0.309 Sum_probs=43.7
Q ss_pred eeeeEEEcccCCcCCCCCcEEe-cCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTI-NAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~-~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.++ +||+|+.. +.+..+ ..|.+-|+++.|.| +-+.|+|||.||- |.+||+..
T Consensus 144 ~v~-lwDvR~~q----q~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGL-vnlfD~~~ 197 (376)
T KOG1188|consen 144 SVV-LWDVRSEQ----QLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGL-VNLFDTKK 197 (376)
T ss_pred EEE-EEEecccc----chhhhhhhhccCcceeEEecCCCCCeEEeecccce-EEeeecCC
Confidence 467 99999876 334444 58999999999999 6789999999999 99999873
No 150
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.18 E-value=2.1e-05 Score=51.61 Aligned_cols=64 Identities=19% Similarity=0.266 Sum_probs=47.8
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+.|..+.+ .+..+......-..+.|+|||+++++++.|+. |.++|+.+++.+.+++.+..+..+
T Consensus 20 viD~~t~~-----~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~-vsviD~~~~~~v~~i~~G~~~~~i 83 (369)
T PF02239_consen 20 VIDGATNK-----VVARIPTGGAPHAGLKFSPDGRYLYVANRDGT-VSVIDLATGKVVATIKVGGNPRGI 83 (369)
T ss_dssp EEETTT-S-----EEEEEE-STTEEEEEE-TT-SSEEEEEETTSE-EEEEETTSSSEEEEEE-SSEEEEE
T ss_pred EEECCCCe-----EEEEEcCCCCceeEEEecCCCCEEEEEcCCCe-EEEEECCcccEEEEEecCCCcceE
Confidence 56766554 78888765544445789999999999999999 999999999999999987776654
No 151
>KOG0288|consensus
Probab=98.18 E-value=5.8e-07 Score=59.27 Aligned_cols=61 Identities=20% Similarity=0.309 Sum_probs=52.0
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
++ +|++.+.. ..++|.+|++.|.++.|......+++++.|.+ |+.||+..+.|.+++...+
T Consensus 243 ~r-~Wnvd~~r-----~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRt-iK~WDl~k~~C~kt~l~~S 303 (459)
T KOG0288|consen 243 LR-LWNVDSLR-----LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRT-IKLWDLQKAYCSKTVLPGS 303 (459)
T ss_pred ee-eeeccchh-----hhhhhcccccceeeehhhccccceeeccccch-hhhhhhhhhheeccccccc
Confidence 45 89988775 89999999999999999987777999999999 9999999888877665443
No 152
>KOG4328|consensus
Probab=98.16 E-value=1.1e-05 Score=53.91 Aligned_cols=51 Identities=20% Similarity=0.259 Sum_probs=41.2
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
|||+++...... .....-.|.-+|+++.|||+|-.|+|-+.|.. |||||..
T Consensus 349 IWD~R~l~~K~s-p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~-IRv~dss 399 (498)
T KOG4328|consen 349 IWDLRQLRGKAS-PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNE-IRVFDSS 399 (498)
T ss_pred eeehhhhcCCCC-cceecccccceeeeeEEcCCCCceEeeccCCc-eEEeecc
Confidence 999999874322 22333479999999999998777999999999 9999983
No 153
>KOG0322|consensus
Probab=98.14 E-value=2.7e-06 Score=53.77 Aligned_cols=38 Identities=18% Similarity=0.402 Sum_probs=35.6
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~ 58 (78)
....+.-|++.|++++|+||...+|++++|.. |.+|++
T Consensus 285 pLAVLkyHsagvn~vAfspd~~lmAaaskD~r-ISLWkL 322 (323)
T KOG0322|consen 285 PLAVLKYHSAGVNAVAFSPDCELMAAASKDAR-ISLWKL 322 (323)
T ss_pred chhhhhhhhcceeEEEeCCCCchhhhccCCce-EEeeec
Confidence 77778889999999999999999999999999 999985
No 154
>KOG1009|consensus
Probab=98.13 E-value=1.2e-05 Score=53.00 Aligned_cols=52 Identities=12% Similarity=0.310 Sum_probs=42.0
Q ss_pred EEEcccCCcCCC----CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 7 SQDLSSTELSSS----SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 7 i~d~~~~~~~~~----~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
||.+....++.+ +....+..|...|+++.|+|+|..||+|+.++. +.+|-..
T Consensus 40 iW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~-v~lWk~~ 95 (434)
T KOG1009|consen 40 IWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGE-VFLWKQG 95 (434)
T ss_pred eeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCce-EEEEEec
Confidence 788777664332 234556789999999999999999999999999 9999654
No 155
>KOG1273|consensus
Probab=98.11 E-value=3.2e-06 Score=54.62 Aligned_cols=47 Identities=21% Similarity=0.370 Sum_probs=43.2
Q ss_pred EEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 31 LACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
-.|+.||+-|.+||+|..||. +.|||..+...-+.+.+|-.|++ +||
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~-vvI~D~~T~~iar~lsaH~~pi~sl~W 73 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGR-VVIYDFDTFRIARMLSAHVRPITSLCW 73 (405)
T ss_pred cceEEeccCcceeeeeccCCc-EEEEEccccchhhhhhccccceeEEEe
Confidence 578999999999999999999 99999999888788888988887 888
No 156
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.10 E-value=4.9e-05 Score=47.10 Aligned_cols=63 Identities=33% Similarity=0.495 Sum_probs=50.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCC-EEEEEcCCCCEEEEeeCCCCcEEE-EeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGT-MIATASSKGTLIRVWDTLKKVQLV-ELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~-~l~s~~~d~~~i~i~d~~~~~~~~-~~~~~~~~ 73 (78)
++ +|++.... ....+.+|...+.+++|+|++. .+++++.|+. +++||...+..+. .+..|...
T Consensus 180 ~~-~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~ 244 (466)
T COG2319 180 IK-LWDLRTGK-----PLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGT-IRLWDLSTGKLLRSTLSGHSDS 244 (466)
T ss_pred eE-EEEcCCCc-----eEEeeccCCCceEEEEEcCCcceEEEEecCCCc-EEEEECCCCcEEeeecCCCCcc
Confidence 45 78877643 7788888999999999999998 5656699999 9999998888777 56666554
No 157
>KOG1063|consensus
Probab=98.10 E-value=9.9e-06 Score=56.38 Aligned_cols=49 Identities=12% Similarity=0.213 Sum_probs=40.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
+|...+-. ..+.+.+|+-.|..++|||||++|+++++|.+ +.+|.....
T Consensus 556 lw~t~~W~-----~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt-~sl~~~~~~ 604 (764)
T KOG1063|consen 556 LWNTANWL-----QVQELEGHSLTVTRLAFSPDGRYLLSVSRDRT-VSLYEVQED 604 (764)
T ss_pred EEeccchh-----hhheecccceEEEEEEECCCCcEEEEeecCce-EEeeeeecc
Confidence 56655543 56678999999999999999999999999999 999976543
No 158
>KOG2445|consensus
Probab=98.10 E-value=2.1e-05 Score=50.64 Aligned_cols=57 Identities=21% Similarity=0.395 Sum_probs=44.0
Q ss_pred cEEec-CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC----cEEEEeeCCCCC-eEEeC
Q psy1940 21 PVTIN-AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK----VQLVELRRGSDP-ATLYW 78 (78)
Q Consensus 21 ~~~~~-~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~----~~~~~~~~~~~~-~~~~w 78 (78)
.+.|. +|++-|+++.|++-|+++|||+.|++ +.|||.++. .+....+.|... .++.|
T Consensus 5 ~~pi~s~h~DlihdVs~D~~GRRmAtCSsDq~-vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~W 67 (361)
T KOG2445|consen 5 MAPIDSGHKDLIHDVSFDFYGRRMATCSSDQT-VKIWDSTSDSGTWSCTSSWRAHDGSIWRVVW 67 (361)
T ss_pred ccccccCCcceeeeeeecccCceeeeccCCCc-EEEEeccCCCCceEEeeeEEecCCcEEEEEe
Confidence 34444 79999999999999999999999999 999996543 466666665544 44655
No 159
>KOG0303|consensus
Probab=98.07 E-value=6.8e-06 Score=54.28 Aligned_cols=58 Identities=19% Similarity=0.297 Sum_probs=46.2
Q ss_pred CcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCC-------cEEEEeeCCCCCeE-EeC
Q psy1940 20 SPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKK-------VQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~-------~~~~~~~~~~~~~~-~~w 78 (78)
..-.+.+|.+++..++|+| +...+|+||+|.+ |.||++..+ +.+..+.+|...+. +.|
T Consensus 73 ~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~-v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~w 139 (472)
T KOG0303|consen 73 SYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTK-VMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQW 139 (472)
T ss_pred CCCCccCccccccccccCccCCceeecCCCCce-EEEEECCCcccccCcccceEEEeecceeEEEEee
Confidence 3445679999999999999 6678999999999 999998754 35677778877766 444
No 160
>KOG0270|consensus
Probab=98.05 E-value=2.1e-06 Score=56.93 Aligned_cols=53 Identities=19% Similarity=0.423 Sum_probs=45.8
Q ss_pred cCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 25 NAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 25 ~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
.+|++.|.+++|+.. .+.||+||.|.+ |.+||+.+|++-..+..|.+.++ +.|
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~T-V~lWD~~~g~p~~s~~~~~k~Vq~l~w 294 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKT-VKLWDVDTGKPKSSITHHGKKVQTLEW 294 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCce-EEEEEcCCCCcceehhhcCCceeEEEe
Confidence 368889999999885 468999999999 99999999999999998777776 666
No 161
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.03 E-value=9.5e-05 Score=44.55 Aligned_cols=65 Identities=14% Similarity=0.221 Sum_probs=43.0
Q ss_pred EEEcccCCcCCCCCcEEecC-CccCEEEEEECCCCCEEEEE--cCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINA-HQSELACLALNQTGTMIATA--SSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~-h~~~i~~v~fs~dg~~l~s~--~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
+|.++..+ .....+.. ..++|.+++|+|+|+.|+.. ..++. |.+||++ +..+..+.. .....+.|
T Consensus 41 l~~~~~~~----~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~-v~lyd~~-~~~i~~~~~-~~~n~i~w 108 (194)
T PF08662_consen 41 LFYLNEKN----IPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAK-VTLYDVK-GKKIFSFGT-QPRNTISW 108 (194)
T ss_pred EEEEecCC----CccceeeccCCCceEEEEECcCCCEEEEEEccCCcc-cEEEcCc-ccEeEeecC-CCceEEEE
Confidence 55554433 24444443 35579999999999987654 45678 9999997 777777753 23334665
No 162
>KOG1332|consensus
Probab=98.02 E-value=4.9e-06 Score=52.14 Aligned_cols=53 Identities=28% Similarity=0.469 Sum_probs=46.3
Q ss_pred cCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC---cEEEEeeCCCCCeE-EeC
Q psy1940 25 NAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK---VQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 25 ~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~---~~~~~~~~~~~~~~-~~w 78 (78)
..|.+.|..+..+.-|++|||++.|++ |+||.++++ ..+.++.+|..|+- +.|
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~t-VkIf~v~~n~~s~ll~~L~Gh~GPVwqv~w 64 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGT-VKIFEVRNNGQSKLLAELTGHSGPVWKVAW 64 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCcc-EEEEEEcCCCCceeeeEecCCCCCeeEEee
Confidence 479999999999999999999999999 999998865 46789999999975 555
No 163
>KOG1408|consensus
Probab=98.02 E-value=1.1e-05 Score=56.87 Aligned_cols=56 Identities=21% Similarity=0.357 Sum_probs=45.3
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEc--CCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATAS--SKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~--~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+..+.+..|..++.+++||++|+++++|. .... +++|++.....+.++-.|+..++
T Consensus 69 tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa-~kVw~la~h~vVAEfvdHKY~vt 126 (1080)
T KOG1408|consen 69 TQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPA-SKVWSLAFHGVVAEFVDHKYNVT 126 (1080)
T ss_pred chhheecccCcceeEEEEcCCCcEEEecccCCCcc-ceeeeeccccchhhhhhccccce
Confidence 36666778889999999999999999986 5556 99999998777777777665544
No 164
>KOG0974|consensus
Probab=98.01 E-value=2.4e-05 Score=56.16 Aligned_cols=48 Identities=21% Similarity=0.302 Sum_probs=41.8
Q ss_pred EecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEE-EeeCCC
Q psy1940 23 TINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLV-ELRRGS 71 (78)
Q Consensus 23 ~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~-~~~~~~ 71 (78)
.+.+|.+.|-++.|+.||+++++.|+|.+ +|+|++.+++.+. ...+|.
T Consensus 170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRs-iRlW~i~s~~~~~~~~fgHs 218 (967)
T KOG0974|consen 170 RLKGHEGSIFSIVTSLDGRYIASVSDDRS-IRLWPIDSREVLGCTGFGHS 218 (967)
T ss_pred eecccCCceEEEEEccCCcEEEEEecCcc-eeeeecccccccCccccccc
Confidence 57899999999999999999999999999 9999999987665 444443
No 165
>KOG2111|consensus
Probab=98.00 E-value=3.3e-05 Score=49.78 Aligned_cols=48 Identities=17% Similarity=0.356 Sum_probs=40.5
Q ss_pred EEEcccCCcCCCCCcEEecC--CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINA--HQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~--h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
|||..++. .++.++. ....|.+++|||++++|+++|..|+ +.||.++.
T Consensus 208 IFdt~~g~-----~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgT-lHiF~l~~ 257 (346)
T KOG2111|consen 208 IFDTEDGT-----LLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGT-LHIFSLRD 257 (346)
T ss_pred EEEcCCCc-----EeeeeecCCchheEEEEEeCCCccEEEEEcCCCe-EEEEEeec
Confidence 78888776 7777863 3557999999999999999999999 99997765
No 166
>KOG1036|consensus
Probab=97.96 E-value=8.1e-06 Score=52.20 Aligned_cols=42 Identities=21% Similarity=0.455 Sum_probs=37.4
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCC
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSD 72 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~ 72 (78)
||++++|+|--..||||+.||. |.+||+.+.+.+.++.+...
T Consensus 234 PVNai~Fhp~~~tfaTgGsDG~-V~~Wd~~~rKrl~q~~~~~~ 275 (323)
T KOG1036|consen 234 PVNAIAFHPIHGTFATGGSDGI-VNIWDLFNRKRLKQLAKYET 275 (323)
T ss_pred EeceeEeccccceEEecCCCce-EEEccCcchhhhhhccCCCC
Confidence 6899999999889999999999 99999999988888776544
No 167
>KOG4378|consensus
Probab=97.96 E-value=5.2e-05 Score=51.63 Aligned_cols=65 Identities=18% Similarity=0.275 Sum_probs=50.3
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC-cEEEEeeCCCCCeE-EeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK-VQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~-~~~~~~~~~~~~~~-~~w 78 (78)
+||++... ...++. ...|..+++|+++|.+|++|...|. +..||++.. .++..+..|...++ +.|
T Consensus 235 ~yD~~s~~-----s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~-~i~YD~R~~k~Pv~v~sah~~sVt~vaf 301 (673)
T KOG4378|consen 235 IYDIRSQA-----STDRLT-YSHPLSTVAFSECGTYLCAGNSKGE-LIAYDMRSTKAPVAVRSAHDASVTRVAF 301 (673)
T ss_pred Eeeccccc-----ccceee-ecCCcceeeecCCceEEEeecCCce-EEEEecccCCCCceEeeecccceeEEEe
Confidence 78887543 334442 3458899999999999999999999 999999975 46677777877766 554
No 168
>KOG0301|consensus
Probab=97.95 E-value=2.5e-05 Score=54.45 Aligned_cols=52 Identities=23% Similarity=0.361 Sum_probs=44.6
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
+..++|.+|.+-|+.+++-+++ .+++++.||. |+.||+ +|.++.++.+|..-
T Consensus 170 ~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~-Ir~w~~-~ge~l~~~~ghtn~ 221 (745)
T KOG0301|consen 170 TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGS-IRLWDL-DGEVLLEMHGHTNF 221 (745)
T ss_pred chhhhhccchhheeeeEEecCC-CeEeecCCce-EEEEec-cCceeeeeeccceE
Confidence 5889999999999999998665 5889999999 999998 78888888887643
No 169
>KOG1007|consensus
Probab=97.95 E-value=3.3e-05 Score=49.53 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=45.6
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~ 60 (78)
|+. |||.+... .+++.+.+|.-.+++|.|+|. ..++.+++.|.. |.+|.+.+
T Consensus 238 yvr-iWD~R~tk----~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~-V~Lsca~s 290 (370)
T KOG1007|consen 238 YVR-IWDTRKTK----FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSA-VNLSCASS 290 (370)
T ss_pred cEE-EEeccCCC----ccccccCCCceEEEEEEecCccceEEEecCCCce-eEEEeccc
Confidence 788 99999987 689999999999999999995 467889999998 99987654
No 170
>KOG1524|consensus
Probab=97.94 E-value=2.4e-06 Score=58.33 Aligned_cols=52 Identities=17% Similarity=0.335 Sum_probs=40.5
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
.-+...+|.+.+.+-.|+|||.-|+|+++||. |++|. ++|....++-....+
T Consensus 96 VE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~-iKiWS-rsGMLRStl~Q~~~~ 147 (737)
T KOG1524|consen 96 VERSISAHAAAISSGRWSPDGAGLLTAGEDGV-IKIWS-RSGMLRSTVVQNEES 147 (737)
T ss_pred hhhhhhhhhhhhhhcccCCCCceeeeecCCce-EEEEe-ccchHHHHHhhcCce
Confidence 44556789999999999999999999999999 99997 566544444333333
No 171
>KOG0772|consensus
Probab=97.93 E-value=2.8e-05 Score=52.96 Aligned_cols=52 Identities=27% Similarity=0.482 Sum_probs=39.5
Q ss_pred eeeEEEcccCCcCCCCCcEEec-----CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTIN-----AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~-----~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
|. |||+.+.. +..++|. +..-++.+.+|+|||+.+|+|..||+ |.+||.++.
T Consensus 293 lR-iWdv~~~k----~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGS-IQ~W~~~~~ 349 (641)
T KOG0772|consen 293 LR-IWDVNNTK----SQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGS-IQIWDKGSR 349 (641)
T ss_pred EE-EEecCCch----hheeEEeeccCCCcccCceeeecCCCcchhhhcccCCc-eeeeecCCc
Confidence 56 89998765 3444442 22335678899999999999999999 999997654
No 172
>KOG1188|consensus
Probab=97.93 E-value=2.4e-05 Score=50.77 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=43.4
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECC--CCCEEEEEcCCCCEEEEeeCCCCcEEEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQ--TGTMIATASSKGTLIRVWDTLKKVQLVE 66 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~--dg~~l~s~~~d~~~i~i~d~~~~~~~~~ 66 (78)
+||..++ +.+..|.++.+.++.++|.. .+..+.+++.||. |++||+|+......
T Consensus 54 lyd~~tg-----~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~-Vr~wD~Rs~~e~a~ 109 (376)
T KOG1188|consen 54 LYDKGTG-----QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGT-VRLWDIRSQAESAR 109 (376)
T ss_pred EEeccch-----hhhheecCCCCcccceEEecCCCCCeeEEeccCCe-EEEEEeecchhhhh
Confidence 5665554 38888999999999999976 5678999999999 99999998754433
No 173
>KOG2394|consensus
Probab=97.91 E-value=7.5e-06 Score=55.77 Aligned_cols=48 Identities=19% Similarity=0.288 Sum_probs=38.0
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
.+..+.-.++.|+.++|+|||++||+.+.||. +||||..+.+++-.++
T Consensus 282 Pv~~w~~~~g~in~f~FS~DG~~LA~VSqDGf-LRvF~fdt~eLlg~mk 329 (636)
T KOG2394|consen 282 PVARWHIGEGSINEFAFSPDGKYLATVSQDGF-LRIFDFDTQELLGVMK 329 (636)
T ss_pred ccceeEeccccccceeEcCCCceEEEEecCce-EEEeeccHHHHHHHHH
Confidence 34444445668999999999999999999999 9999988776554443
No 174
>KOG1036|consensus
Probab=97.87 E-value=0.0001 Score=47.33 Aligned_cols=51 Identities=24% Similarity=0.417 Sum_probs=41.3
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQL 64 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~ 64 (78)
.+|+... ....+..|..+|.||.+++....+++|+-|++ |++||.+...+.
T Consensus 79 ~~Dln~~------~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~-ik~wD~R~~~~~ 129 (323)
T KOG1036|consen 79 RYDLNTG------NEDQIGTHDEGIRCIEYSYEVGCVISGSWDKT-IKFWDPRNKVVV 129 (323)
T ss_pred EEEecCC------cceeeccCCCceEEEEeeccCCeEEEcccCcc-EEEEeccccccc
Confidence 5665433 45567789999999999998889999999999 999999954333
No 175
>KOG4547|consensus
Probab=97.85 E-value=0.00014 Score=49.68 Aligned_cols=54 Identities=19% Similarity=0.262 Sum_probs=47.0
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
..+.+...+..+.++..+|||+.|++++ +. |.+||+++++.+..|.+|..+++.
T Consensus 136 ~~~~~~~~~~~~~sl~is~D~~~l~~as--~~-ik~~~~~~kevv~~ftgh~s~v~t 189 (541)
T KOG4547|consen 136 IIRIWKEQKPLVSSLCISPDGKILLTAS--RQ-IKVLDIETKEVVITFTGHGSPVRT 189 (541)
T ss_pred eeeeeccCCCccceEEEcCCCCEEEecc--ce-EEEEEccCceEEEEecCCCcceEE
Confidence 5666667777888999999999999988 44 999999999999999999999873
No 176
>KOG0301|consensus
Probab=97.84 E-value=0.00016 Score=50.55 Aligned_cols=54 Identities=15% Similarity=0.279 Sum_probs=44.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+|++ .++ ++..+.+|++-+++++..+++..++++++|++ +|||+.. ++.+.+..
T Consensus 204 ~w~~-~ge-----~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrt-lriW~~~--e~~q~I~l 257 (745)
T KOG0301|consen 204 LWDL-DGE-----VLLEMHGHTNFVYSISMALSDGLIVSTGEDRT-LRIWKKD--ECVQVITL 257 (745)
T ss_pred EEec-cCc-----eeeeeeccceEEEEEEecCCCCeEEEecCCce-EEEeecC--ceEEEEec
Confidence 6777 444 88889999999999998888889999999999 9999866 56665554
No 177
>KOG1274|consensus
Probab=97.83 E-value=0.0001 Score=52.75 Aligned_cols=40 Identities=23% Similarity=0.386 Sum_probs=32.7
Q ss_pred CcEEec--CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 20 SPVTIN--AHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 20 ~~~~~~--~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
....++ -+...++.++|+|.|+|||+++.||. |.|||..+
T Consensus 222 ~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~-I~vWnv~t 263 (933)
T KOG1274|consen 222 LQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQ-ILVWNVDT 263 (933)
T ss_pred eheeecccccccceEEEEEcCCCcEEeeeccCCc-EEEEeccc
Confidence 444444 23444899999999999999999999 99999985
No 178
>KOG1524|consensus
Probab=97.83 E-value=5.4e-05 Score=51.96 Aligned_cols=57 Identities=16% Similarity=0.272 Sum_probs=46.6
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
.+...++|.+-|.++.|++..+.+++|++|-. .+|||.. |..+++-..|..|++ +.|
T Consensus 178 k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~k-fKvWD~~-G~~Lf~S~~~ey~ITSva~ 235 (737)
T KOG1524|consen 178 KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFR-FKIWDAQ-GANLFTSAAEEYAITSVAF 235 (737)
T ss_pred ceeEEeccCcEEEEeecCccccceeecCCcee-EEeeccc-CcccccCChhccceeeeee
Confidence 45557899999999999999999999999999 9999965 666666666666655 555
No 179
>KOG4328|consensus
Probab=97.82 E-value=2.2e-05 Score=52.49 Aligned_cols=49 Identities=29% Similarity=0.415 Sum_probs=42.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~ 60 (78)
+||++... +....++.|+..|.+++++|. -.+|+|++.|++ .+|||++.
T Consensus 305 ~iD~R~~~----s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T-~kIWD~R~ 354 (498)
T KOG4328|consen 305 VIDLRTDG----SEYENLRLHKKKITSVALNPVCPWFLATASLDQT-AKIWDLRQ 354 (498)
T ss_pred EEEeecCC----ccchhhhhhhcccceeecCCCCchheeecccCcc-eeeeehhh
Confidence 78888765 456677889999999999995 578999999999 99999985
No 180
>KOG1408|consensus
Probab=97.81 E-value=8.3e-05 Score=52.60 Aligned_cols=65 Identities=20% Similarity=0.293 Sum_probs=55.6
Q ss_pred eeeEEEcccCCcCCCCCcEEec---CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 4 LQCSQDLSSTELSSSSSPVTIN---AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~---~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+. |||+.++. ..+.|+ .|.+..-.+...|.|-++++...|++ +-++|..+|+++..+.+|...++
T Consensus 620 ir-if~i~sgK-----q~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdkt-l~~~Df~sgEcvA~m~GHsE~VT 687 (1080)
T KOG1408|consen 620 IR-IFDIESGK-----QVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKT-LCFVDFVSGECVAQMTGHSEAVT 687 (1080)
T ss_pred eE-EEeccccc-----eeeeecccccCCCceEEEEECCCccEEEEeecCCc-eEEEEeccchhhhhhcCcchhee
Confidence 45 78888775 788886 46666777889999999999999999 99999999999999999987765
No 181
>KOG4283|consensus
Probab=97.73 E-value=0.00019 Score=46.34 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=53.4
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCC---CEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTG---TMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg---~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
||+ +||..+.. ....|. -.+.|++-++||.. .++|+|..|-. |++-|+.+|.+-+.+.+|.+.+= +-|
T Consensus 125 tlK-VWDtnTlQ-----~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~-VrLCDi~SGs~sH~LsGHr~~vlaV~W 196 (397)
T KOG4283|consen 125 TLK-VWDTNTLQ-----EAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQ-VRLCDIASGSFSHTLSGHRDGVLAVEW 196 (397)
T ss_pred eEE-Eeecccce-----eeEEee-cCceeehhhcChhhhcceEEEEecCCCc-EEEEeccCCcceeeeccccCceEEEEe
Confidence 788 99987765 555554 45678889999954 47788888888 99999999999999999987653 444
No 182
>KOG4714|consensus
Probab=97.71 E-value=2.3e-05 Score=49.58 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=42.5
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
+||.++.. -..-.+.+|+.+|+.|-|.| ++..|.++++||. +--||..+
T Consensus 206 l~d~rn~~----~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGs-lw~wdas~ 255 (319)
T KOG4714|consen 206 LWDARNVA----MPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGS-LWHWDAST 255 (319)
T ss_pred EEEccccc----chHHHHHHhhhhhhheeccCCCchheeEecCCCc-EEEEcCCC
Confidence 89999875 35555679999999999999 7899999999999 99999874
No 183
>KOG2919|consensus
Probab=97.67 E-value=7.5e-05 Score=48.55 Aligned_cols=61 Identities=18% Similarity=0.373 Sum_probs=44.0
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEE-EEEE--CCCCCEEEEEcCCCCEEEEeeCCC-CcEEEEeeCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELA-CLAL--NQTGTMIATASSKGTLIRVWDTLK-KVQLVELRRGSD 72 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~-~v~f--s~dg~~l~s~~~d~~~i~i~d~~~-~~~~~~~~~~~~ 72 (78)
.||+++.. ..+..+..|.+--+ .|-| .|+|+.|++|+.||. |++||..+ |..+..+..+++
T Consensus 277 ~WDiR~~~----~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~-V~vwdlk~~gn~~sv~~~~sd 341 (406)
T KOG2919|consen 277 CWDIRYSR----DPVYALERHVGDTNQRILFDLDPKGEILASGDTDGS-VRVWDLKDLGNEVSVTGNYSD 341 (406)
T ss_pred EEeehhcc----chhhhhhhhccCccceEEEecCCCCceeeccCCCcc-EEEEecCCCCCcccccccccc
Confidence 79999875 46666777755222 3444 789999999999999 99999987 654555544443
No 184
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.67 E-value=0.00025 Score=33.71 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=28.9
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
..+|.+++|+|....||.+..+|. |.++.+ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~-v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGE-VLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCe-EEEEEC-CCc
Confidence 446899999999999999999999 999988 444
No 185
>KOG0644|consensus
Probab=97.66 E-value=1e-05 Score=57.61 Aligned_cols=63 Identities=25% Similarity=0.374 Sum_probs=55.6
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
||...+.. +....+||.+.|..++-+....++++++.|.. |++|-++++.++..+++|...++
T Consensus 216 iwS~et~~-----~lAs~rGhs~ditdlavs~~n~~iaaaS~D~v-IrvWrl~~~~pvsvLrghtgavt 278 (1113)
T KOG0644|consen 216 IWSMETAR-----CLASCRGHSGDITDLAVSSNNTMIAAASNDKV-IRVWRLPDGAPVSVLRGHTGAVT 278 (1113)
T ss_pred eeeccchh-----hhccCCCCccccchhccchhhhhhhhcccCce-EEEEecCCCchHHHHhcccccee
Confidence 66655554 88889999999999999999999999999998 99999999999999999886655
No 186
>KOG0644|consensus
Probab=97.66 E-value=3.8e-05 Score=54.86 Aligned_cols=54 Identities=22% Similarity=0.364 Sum_probs=48.2
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
++.+.+|.+.|+|+.|...|.++.+++.|.- ++||.+.++.++...++|..-++
T Consensus 183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~l-vKiwS~et~~~lAs~rGhs~dit 236 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRL-VKIWSMETARCLASCRGHSGDIT 236 (1113)
T ss_pred HHHHHhhhhheeeeeeccccceEeecCccce-eeeeeccchhhhccCCCCccccc
Confidence 3445789999999999999999999999998 99999999999999999876543
No 187
>KOG0322|consensus
Probab=97.65 E-value=0.00011 Score=46.63 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=43.0
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
....|..+.+.||++.+||++-|+. ||||.-++...+..+.-|++.++
T Consensus 250 knpGv~gvrIRpD~KIlATAGWD~R-iRVyswrtl~pLAVLkyHsagvn 297 (323)
T KOG0322|consen 250 KNPGVSGVRIRPDGKILATAGWDHR-IRVYSWRTLNPLAVLKYHSAGVN 297 (323)
T ss_pred cCCCccceEEccCCcEEeecccCCc-EEEEEeccCCchhhhhhhhccee
Confidence 3556888999999999999999999 99999999999999988877765
No 188
>KOG1063|consensus
Probab=97.64 E-value=0.00038 Score=48.80 Aligned_cols=53 Identities=13% Similarity=0.373 Sum_probs=43.7
Q ss_pred CcEEecCCccCEEEEEECCCCC---EEEEEcCCCCEEEEeeCCCC--cEEEEeeCCCCC
Q psy1940 20 SPVTINAHQSELACLALNQTGT---MIATASSKGTLIRVWDTLKK--VQLVELRRGSDP 73 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~---~l~s~~~d~~~i~i~d~~~~--~~~~~~~~~~~~ 73 (78)
.+.++++|.++|+|+.|-|+.+ .+++|+.|+. |++|.++.. .++..+++|..+
T Consensus 46 i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~-v~lW~l~~~~~~~i~~~~g~~~~ 103 (764)
T KOG1063|consen 46 IVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGR-VILWKLRDEYLIKIYTIQGHCKE 103 (764)
T ss_pred eEEeccCCccceEEEEEcccccccceEEEccCCCc-EEEEEEeehheEEEEeecCccee
Confidence 6778899999999999998877 8999999999 999998843 355666665444
No 189
>KOG4640|consensus
Probab=97.63 E-value=0.00021 Score=49.59 Aligned_cols=46 Identities=28% Similarity=0.340 Sum_probs=38.4
Q ss_pred CcEEecCCccCEE-EEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEE
Q psy1940 20 SPVTINAHQSELA-CLALNQTGTMIATASSKGTLIRVWDTLKKVQLVE 66 (78)
Q Consensus 20 ~~~~~~~h~~~i~-~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~ 66 (78)
.+-+++-|.-++. +++|.|||+.||.|-.||+ |++.|+.++..+..
T Consensus 53 Rlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~-I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 53 RLWTIPIPGENVTASLCWRPDGKLLAVGFKDGT-IRLHDVEKGGRLVS 99 (665)
T ss_pred eeEeccCCCCccceeeeecCCCCEEEEEecCCe-EEEEEccCCCceec
Confidence 4455565655666 9999999999999999999 99999999877766
No 190
>KOG2919|consensus
Probab=97.63 E-value=0.0001 Score=47.96 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=48.1
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCC-CCEEEEeeCCCC-cEEEEeeCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSK-GTLIRVWDTLKK-VQLVELRRGS 71 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d-~~~i~i~d~~~~-~~~~~~~~~~ 71 (78)
|.| -++++.-. ...+.+.+-+|++.|.-+.|.+||+.|.+|++. .. |.+||++.. ..+..+.+|.
T Consensus 228 Y~q-~~giy~~~--~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dk-Il~WDiR~~~~pv~~L~rhv 294 (406)
T KOG2919|consen 228 YGQ-RVGIYNDD--GRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDK-ILCWDIRYSRDPVYALERHV 294 (406)
T ss_pred ccc-eeeeEecC--CCCceeeecccCCCeeeEEeccCcCeecccccCCCe-EEEEeehhccchhhhhhhhc
Confidence 445 45555543 335788888999999999999999999998664 45 999999853 4556665554
No 191
>KOG0321|consensus
Probab=97.62 E-value=5.9e-05 Score=52.34 Aligned_cols=49 Identities=16% Similarity=0.220 Sum_probs=40.9
Q ss_pred EEEcccCCcCCCCCcEE--ecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCCC
Q psy1940 7 SQDLSSTELSSSSSPVT--INAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~--~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~~ 61 (78)
.||+.... +... +-+|.+.+.+++|.|+ -..|++|+.|+. |.|||++-.
T Consensus 126 ~Wdvk~s~-----l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~-illWD~R~n 177 (720)
T KOG0321|consen 126 PWDVKTSR-----LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGE-ILLWDCRCN 177 (720)
T ss_pred eeeeccce-----eecceeecccccccchhhhccCCCcceeeccCCCc-EEEEEEecc
Confidence 79988765 4444 7799999999999994 568999999999 999998843
No 192
>KOG3881|consensus
Probab=97.58 E-value=0.00013 Score=48.15 Aligned_cols=54 Identities=13% Similarity=0.158 Sum_probs=45.1
Q ss_pred EEEcccCCcCCCCCcEE-ecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEE
Q psy1940 7 SQDLSSTELSSSSSPVT-INAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVE 66 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~-~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~ 66 (78)
.||++... .... +.+-.+.|++|.-.|.+.+|++++.|.. +||+|+.+.+.+..
T Consensus 273 ~FD~r~~k-----l~g~~~kg~tGsirsih~hp~~~~las~GLDRy-vRIhD~ktrkll~k 327 (412)
T KOG3881|consen 273 KFDLRGGK-----LLGCGLKGITGSIRSIHCHPTHPVLASCGLDRY-VRIHDIKTRKLLHK 327 (412)
T ss_pred eecccCce-----eeccccCCccCCcceEEEcCCCceEEeecccee-EEEeecccchhhhh
Confidence 67877664 4444 7888999999999999999999999999 99999999765543
No 193
>KOG4497|consensus
Probab=97.57 E-value=0.00037 Score=45.63 Aligned_cols=55 Identities=22% Similarity=0.232 Sum_probs=44.2
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEE-EEEcCCCCEEEEeeCCCCcEE
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMI-ATASSKGTLIRVWDTLKKVQL 64 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l-~s~~~d~~~i~i~d~~~~~~~ 64 (78)
.+| +|++.+.+ -...++..+.++.+++|||||+.+ .+...|-. |.+|.+.+.++.
T Consensus 72 ~vq-vwsl~Qpe-----w~ckIdeg~agls~~~WSPdgrhiL~tseF~lr-iTVWSL~t~~~~ 127 (447)
T KOG4497|consen 72 KVQ-VWSLVQPE-----WYCKIDEGQAGLSSISWSPDGRHILLTSEFDLR-ITVWSLNTQKGY 127 (447)
T ss_pred eEE-EEEeecce-----eEEEeccCCCcceeeeECCCcceEeeeecceeE-EEEEEeccceeE
Confidence 367 89998876 777788888899999999999654 56677777 999998876543
No 194
>KOG1539|consensus
Probab=97.56 E-value=0.00062 Score=48.63 Aligned_cols=63 Identities=13% Similarity=0.173 Sum_probs=56.8
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
+| ||.++++. .+++|+++...|+++.=+|--..+|.|..+|. |.+++++.++.+.+++.....
T Consensus 184 lq-l~Nvrt~K-----~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~-ViifNlK~dkil~sFk~d~g~ 246 (910)
T KOG1539|consen 184 LQ-LWNVRTGK-----VVYTFQEFFSRITAIEQSPALDVVAIGLENGT-VIIFNLKFDKILMSFKQDWGR 246 (910)
T ss_pred EE-EEEeccCc-----EEEEecccccceeEeccCCcceEEEEeccCce-EEEEEcccCcEEEEEEccccc
Confidence 57 89998876 99999999999999999998889999999999 999999999999999875333
No 195
>PRK01742 tolB translocation protein TolB; Provisional
Probab=97.52 E-value=0.00066 Score=45.16 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=34.3
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCC---CCEEEEeeCCCCcE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSK---GTLIRVWDTLKKVQ 63 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d---~~~i~i~d~~~~~~ 63 (78)
..+.+..|...+.+.+|||||+.|+..+.+ .. |.+||+.++..
T Consensus 195 ~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~-i~i~dl~tg~~ 240 (429)
T PRK01742 195 NQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQ-LVVHDLRSGAR 240 (429)
T ss_pred CceEeccCCCccccceEcCCCCEEEEEEecCCCcE-EEEEeCCCCce
Confidence 456667788889999999999999887643 36 99999988753
No 196
>KOG1587|consensus
Probab=97.50 E-value=0.00079 Score=46.58 Aligned_cols=67 Identities=22% Similarity=0.447 Sum_probs=47.5
Q ss_pred eEEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcE--EEEe----eCCCCCeE-Ee
Q psy1940 6 CSQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQ--LVEL----RRGSDPAT-LY 77 (78)
Q Consensus 6 ~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~--~~~~----~~~~~~~~-~~ 77 (78)
++|++.+.. ..-..+. -..+|.++.|+| +.+.++.|..+|. |-+||++.+.. ...+ ..|..++. ++
T Consensus 225 ~vW~~~~p~----~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~Gq-V~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vv 298 (555)
T KOG1587|consen 225 LVWSLKNPN----TPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQ-VVLWDLRKGSDTPPSGLSALEVSHSEPVTAVV 298 (555)
T ss_pred EEEecCCCC----CceEEEe-cCCceeEEEeccCCcceEEeeccCce-EEEEEccCCCCCCCcccccccccCCcCeEEEE
Confidence 478888764 3444443 467899999999 6789999999999 99999997654 2222 23555554 66
Q ss_pred C
Q psy1940 78 W 78 (78)
Q Consensus 78 w 78 (78)
|
T Consensus 299 W 299 (555)
T KOG1587|consen 299 W 299 (555)
T ss_pred E
Confidence 6
No 197
>KOG2106|consensus
Probab=97.50 E-value=0.0012 Score=45.24 Aligned_cols=40 Identities=20% Similarity=0.365 Sum_probs=32.9
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
...++.....++++++|+|+|.+||.|+.|+. |.+|-+..
T Consensus 439 ~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~-iyiy~Vs~ 478 (626)
T KOG2106|consen 439 DLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNH-IYIYRVSA 478 (626)
T ss_pred eeEEEEecCCceEEEEEcCCCCEEEEecCCCe-EEEEEECC
Confidence 33344444779999999999999999999999 99997664
No 198
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.48 E-value=0.00093 Score=44.01 Aligned_cols=59 Identities=20% Similarity=0.268 Sum_probs=41.7
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEc-CCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATAS-SKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~-~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
+. ++|+.+.. .+.+++...+ ..++++|+||++++++. .++. +.++|.++.+.++.++.+
T Consensus 60 vs-viD~~~~~-----~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~-v~v~D~~tle~v~~I~~~ 119 (369)
T PF02239_consen 60 VS-VIDLATGK-----VVATIKVGGN-PRGIAVSPDGKYVYVANYEPGT-VSVIDAETLEPVKTIPTG 119 (369)
T ss_dssp EE-EEETTSSS-----EEEEEE-SSE-EEEEEE--TTTEEEEEEEETTE-EEEEETTT--EEEEEE--
T ss_pred EE-EEECCccc-----EEEEEecCCC-cceEEEcCCCCEEEEEecCCCc-eeEeccccccceeecccc
Confidence 45 78888776 8888876554 46799999999998774 5777 999999999998888643
No 199
>KOG3881|consensus
Probab=97.46 E-value=0.00063 Score=44.99 Aligned_cols=58 Identities=16% Similarity=0.192 Sum_probs=51.0
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEE
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVE 66 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~ 66 (78)
++. +||.+..- +++.+|.--..+|+++...|+|++++++...+. +..||.+.++.+..
T Consensus 227 qvR-~YDt~~qR----RPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~-l~~FD~r~~kl~g~ 284 (412)
T KOG3881|consen 227 QVR-LYDTRHQR----RPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQ-LAKFDLRGGKLLGC 284 (412)
T ss_pred eEE-EecCcccC----cceeEeccccCcceeeeecCCCcEEEEecccch-hheecccCceeecc
Confidence 466 88888654 688999888899999999999999999999999 99999999987765
No 200
>KOG0307|consensus
Probab=97.45 E-value=0.00018 Score=52.34 Aligned_cols=56 Identities=23% Similarity=0.297 Sum_probs=43.1
Q ss_pred EEEcccC-CcCCCCCcEEecCCccCEEEEEECCCC-CEEEEEcCCCCEEEEeeCCCCcE
Q psy1940 7 SQDLSST-ELSSSSSPVTINAHQSELACLALNQTG-TMIATASSKGTLIRVWDTLKKVQ 63 (78)
Q Consensus 7 i~d~~~~-~~~~~~~~~~~~~h~~~i~~v~fs~dg-~~l~s~~~d~~~i~i~d~~~~~~ 63 (78)
+||.... ..++...+.+.+.|.++|..+.|++.. +.||+|+.||. |.|||++.-+.
T Consensus 94 ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~ge-I~iWDlnn~~t 151 (1049)
T KOG0307|consen 94 LYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGE-ILIWDLNKPET 151 (1049)
T ss_pred EecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCc-EEEeccCCcCC
Confidence 5665543 122334677788999999999999965 59999999999 99999986443
No 201
>KOG2695|consensus
Probab=97.44 E-value=0.0004 Score=45.62 Aligned_cols=64 Identities=14% Similarity=0.230 Sum_probs=51.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcE---EEEeeCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQ---LVELRRGSD 72 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~---~~~~~~~~~ 72 (78)
.+|++....++.-+.+.+. |...|.++..-. ++.+|.+.+++|. |.+||.+-.++ +.++++|.+
T Consensus 278 ~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gk-ikLyD~R~~K~~~~V~qYeGHvN 345 (425)
T KOG2695|consen 278 VIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGK-IKLYDLRATKCKKSVMQYEGHVN 345 (425)
T ss_pred EEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCc-eeEeeehhhhcccceeeeecccc
Confidence 5688887666666777774 888999886654 6789999999999 99999997666 888888753
No 202
>KOG1912|consensus
Probab=97.40 E-value=0.00038 Score=49.73 Aligned_cols=66 Identities=24% Similarity=0.284 Sum_probs=56.5
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCC------CC------EEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCe
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQT------GT------MIATASSKGTLIRVWDTLKKVQLVELRRGSDPA 74 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d------g~------~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 74 (78)
+.|.++.. .++++..|+..|++|.|.|- +. .||++...|. |.+||...+..+..+.++.+++
T Consensus 39 VVDs~s~q-----~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~Gr-Iil~d~~~~s~~~~l~~~~~~~ 112 (1062)
T KOG1912|consen 39 VVDSRSLQ-----LIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGR-IILVDFVLASVINWLSHSNDSV 112 (1062)
T ss_pred EEehhhhh-----hhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCc-EEEEEehhhhhhhhhcCCCcch
Confidence 67877776 88899999999999999882 22 6778888999 9999999999999999888887
Q ss_pred E-EeC
Q psy1940 75 T-LYW 78 (78)
Q Consensus 75 ~-~~w 78 (78)
. +||
T Consensus 113 qdl~W 117 (1062)
T KOG1912|consen 113 QDLCW 117 (1062)
T ss_pred hheee
Confidence 6 888
No 203
>KOG1538|consensus
Probab=97.32 E-value=0.0005 Score=48.61 Aligned_cols=47 Identities=21% Similarity=0.285 Sum_probs=40.8
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
.|+.++|-|||+.|+.+..+. +.+||++.|..++.+++|.+.+. +.|
T Consensus 14 ci~d~afkPDGsqL~lAAg~r--lliyD~ndG~llqtLKgHKDtVycVAy 61 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGSR--LLVYDTSDGTLLQPLKGHKDTVYCVAY 61 (1081)
T ss_pred chheeEECCCCceEEEecCCE--EEEEeCCCcccccccccccceEEEEEE
Confidence 788999999999988877554 89999999999999999998876 444
No 204
>KOG0280|consensus
Probab=97.31 E-value=0.0012 Score=42.48 Aligned_cols=56 Identities=25% Similarity=0.189 Sum_probs=41.5
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCC-CcEEEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLK-KVQLVE 66 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~-~~~~~~ 66 (78)
-||+|... .-..+..+.|...|.+|.=|| ++.+++||+-|.. |++||.++ +++++.
T Consensus 192 ~~D~R~p~---~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~-i~~~DtRnm~kPl~~ 249 (339)
T KOG0280|consen 192 CWDIRIPK---TFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDEC-IRVLDTRNMGKPLFK 249 (339)
T ss_pred EEEecCCc---ceeeecceeeecceEEEecCCCCCceEEEeccccc-eeeeehhcccCcccc
Confidence 68988332 012333567899999998776 6899999999999 99999984 555543
No 205
>KOG2139|consensus
Probab=97.31 E-value=0.0016 Score=43.10 Aligned_cols=46 Identities=15% Similarity=0.264 Sum_probs=34.7
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~ 58 (78)
|||...+. ..-.....-+.++-+.|||||.+|.+++.|+. .++|..
T Consensus 222 iWdpdtg~-----~~pL~~~glgg~slLkwSPdgd~lfaAt~dav-frlw~e 267 (445)
T KOG2139|consen 222 IWDPDTGQ-----KIPLIPKGLGGFSLLKWSPDGDVLFAATCDAV-FRLWQE 267 (445)
T ss_pred EEcCCCCC-----cccccccCCCceeeEEEcCCCCEEEEecccce-eeeehh
Confidence 78876654 22112344567788999999999999999999 999943
No 206
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.29 E-value=0.0042 Score=40.88 Aligned_cols=60 Identities=17% Similarity=0.282 Sum_probs=45.2
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCC-EEEEEc-CCCCEEEEeeCCCCcEEEEe-eCCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGT-MIATAS-SKGTLIRVWDTLKKVQLVEL-RRGSDP 73 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~-~l~s~~-~d~~~i~i~d~~~~~~~~~~-~~~~~~ 73 (78)
++|..+.. ....+.. ...+..++|+|||+ +|++.. .++. |.++|+.+++.+..+ +-+..|
T Consensus 283 ViD~~t~k-----vi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~-VsViD~~t~k~i~~i~~vg~~P 345 (352)
T TIGR02658 283 VVDAKTGK-----RLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKT-LYIFDAETGKELSSVNQLGRGP 345 (352)
T ss_pred EEECCCCe-----EEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCc-EEEEECcCCeEEeeeccCCCCC
Confidence 66766554 6666653 34788999999999 888666 5787 999999999999998 544433
No 207
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.28 E-value=0.0021 Score=44.24 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=32.0
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
.....+.|.+++|+.+.|+.|..||+ |.+||...+.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgS-iiLyD~~~~~ 292 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGS-IILYDTTRGV 292 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCe-EEEEEcCCCe
Confidence 45668889999999999999999999 9999988764
No 208
>KOG3914|consensus
Probab=97.25 E-value=0.00034 Score=46.11 Aligned_cols=41 Identities=20% Similarity=0.373 Sum_probs=36.0
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
||+.-|..++.- ++..|++++.|++ +++||+++|+++.++.
T Consensus 192 GH~eFVS~isl~-~~~~LlS~sGD~t-lr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 192 GHKEFVSTISLT-DNYLLLSGSGDKT-LRLWDITSGKLLDTCD 232 (390)
T ss_pred ccHhheeeeeec-cCceeeecCCCCc-EEEEecccCCcccccc
Confidence 799999999987 4567999999999 9999999999887765
No 209
>KOG0321|consensus
Probab=97.23 E-value=0.0007 Score=47.22 Aligned_cols=67 Identities=18% Similarity=0.148 Sum_probs=49.3
Q ss_pred EEEcccCCcC-CCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEE--eeCCCCCe
Q psy1940 7 SQDLSSTELS-SSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVE--LRRGSDPA 74 (78)
Q Consensus 7 i~d~~~~~~~-~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~--~~~~~~~~ 74 (78)
++|..+.... +....+.+..|.+.|-.++|-|....|++++.|.+ +++||++.+.++.. +.+|...+
T Consensus 78 l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT-~r~Wdvk~s~l~G~~~~~GH~~Sv 147 (720)
T KOG0321|consen 78 LFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDST-IRPWDVKTSRLVGGRLNLGHTGSV 147 (720)
T ss_pred eecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCce-eeeeeeccceeecceeeccccccc
Confidence 4555544321 11234566799999999999997679999999999 99999998887755 66665443
No 210
>KOG4378|consensus
Probab=97.23 E-value=0.00089 Score=45.86 Aligned_cols=59 Identities=24% Similarity=0.255 Sum_probs=48.7
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
++ |||++..- +.+.+..|+..|.++.++....+||+++..|. |.|..+.++..-..+..
T Consensus 103 Vk-iwdl~~kl-----~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGd-iiih~~~t~~~tt~f~~ 161 (673)
T KOG4378|consen 103 VK-IWDLRAKL-----IHRFLKDHQSTVTYVDYNNTDEYIASVSDGGD-IIIHGTKTKQKTTTFTI 161 (673)
T ss_pred ee-ehhhHHHH-----HhhhccCCcceeEEEEecCCcceeEEeccCCc-EEEEecccCccccceec
Confidence 45 89988543 67777899999999999999999999999999 99999887765555543
No 211
>KOG2445|consensus
Probab=97.20 E-value=0.00039 Score=44.95 Aligned_cols=49 Identities=20% Similarity=0.366 Sum_probs=39.1
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC---CCcEEEEeeC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL---KKVQLVELRR 69 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~---~~~~~~~~~~ 69 (78)
.+..+..|+++|+.+.|+-.|+.|++.+.||. +|+|... .-+|...+..
T Consensus 280 ~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~-VRLWkany~n~~kC~sv~~~ 331 (361)
T KOG2445|consen 280 KVSELDDHNGEVWRVRWNMTGTILSSTGDDGC-VRLWKANYNNLWKCTSVLKA 331 (361)
T ss_pred EeeeccCCCCceEEEEEeeeeeEEeecCCCce-eeehhhhhhhhheeeeEEec
Confidence 34556789999999999999999999999999 9999644 2245555543
No 212
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.19 E-value=0.0011 Score=42.24 Aligned_cols=46 Identities=15% Similarity=0.370 Sum_probs=38.9
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
.++.|..++.||||+.||+...+|. |-+|++.+-++....+....|
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~-lsLW~iPsL~~~~~W~~~eqP 273 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGS-LSLWEIPSLRLQRSWKQDEQP 273 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCe-EEEEecCcchhhcccchhhCC
Confidence 4678999999999999999999999 999999988777776654433
No 213
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.19 E-value=0.0047 Score=41.14 Aligned_cols=43 Identities=9% Similarity=-0.005 Sum_probs=34.7
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcC---CCCEEEEeeCCCCcE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASS---KGTLIRVWDTLKKVQ 63 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~---d~~~i~i~d~~~~~~ 63 (78)
..+.+..|...+.+.+|+|||+.|+..+. +.. |.+||+.++..
T Consensus 193 ~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~-i~~~dl~~g~~ 238 (435)
T PRK05137 193 NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPR-VYLLDLETGQR 238 (435)
T ss_pred CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCE-EEEEECCCCcE
Confidence 55667778889999999999999887653 356 99999988764
No 214
>KOG2079|consensus
Probab=97.17 E-value=0.00097 Score=48.88 Aligned_cols=48 Identities=25% Similarity=0.475 Sum_probs=42.0
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
.+++|.+++|+.||+.++.|-.+|. |.+||+..++.++.+..+..|.+
T Consensus 129 v~~~Vtsvafn~dg~~l~~G~~~G~-V~v~D~~~~k~l~~i~e~~ap~t 176 (1206)
T KOG2079|consen 129 VQGPVTSVAFNQDGSLLLAGLGDGH-VTVWDMHRAKILKVITEHGAPVT 176 (1206)
T ss_pred cCCcceeeEecCCCceeccccCCCc-EEEEEccCCcceeeeeecCCccc
Confidence 4679999999999999999999999 99999999998888876666543
No 215
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=97.15 E-value=0.0041 Score=29.01 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=26.1
Q ss_pred cCEEEEEECCCC---CEEEEEcCCCCEEEEeeCCCC
Q psy1940 29 SELACLALNQTG---TMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 29 ~~i~~v~fs~dg---~~l~s~~~d~~~i~i~d~~~~ 61 (78)
+.+.+++|||+. ..|+-+...+. |-++|++++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~-vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGR-VHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCe-EEEEEcccC
Confidence 468899999844 58888888888 999999964
No 216
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.14 E-value=0.0044 Score=39.54 Aligned_cols=37 Identities=35% Similarity=0.430 Sum_probs=30.7
Q ss_pred EEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 31 LACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
=..++||||++.||.+...|+ |++||+- |..+..++.
T Consensus 46 WRkl~WSpD~tlLa~a~S~G~-i~vfdl~-g~~lf~I~p 82 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAESTGT-IRVFDLM-GSELFVIPP 82 (282)
T ss_pred heEEEECCCCcEEEEEcCCCe-EEEEecc-cceeEEcCc
Confidence 357999999999999999999 9999986 455556654
No 217
>KOG2321|consensus
Probab=97.11 E-value=0.0033 Score=43.76 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=33.0
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEe
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~ 67 (78)
.|++++|+.+|-.++.|..+|. +.|||++..+++..-
T Consensus 230 svTal~F~d~gL~~aVGts~G~-v~iyDLRa~~pl~~k 266 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVGTSTGS-VLIYDLRASKPLLVK 266 (703)
T ss_pred cceEEEecCCceeEEeeccCCc-EEEEEcccCCceeec
Confidence 4899999999999999999999 999999988766543
No 218
>KOG0649|consensus
Probab=97.09 E-value=0.0026 Score=40.36 Aligned_cols=48 Identities=21% Similarity=0.149 Sum_probs=42.1
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
.-.+|+++...|..+.+..++.|+. +..||+++|+.-+++++|.+.+.
T Consensus 113 evPeINam~ldP~enSi~~AgGD~~-~y~~dlE~G~i~r~~rGHtDYvH 160 (325)
T KOG0649|consen 113 EVPEINAMWLDPSENSILFAGGDGV-IYQVDLEDGRIQREYRGHTDYVH 160 (325)
T ss_pred cCCccceeEeccCCCcEEEecCCeE-EEEEEecCCEEEEEEcCCcceee
Confidence 3457899999998888888889998 99999999999999999988764
No 219
>KOG1645|consensus
Probab=97.07 E-value=0.0011 Score=44.14 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=50.1
Q ss_pred CcEEecCCccCEEEEEECCCCC-EEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 20 SPVTINAHQSELACLALNQTGT-MIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~-~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
..+-+.+|...|..++|||... ++..++.+.. |+|.|+++..++..+-.+..+-.+||
T Consensus 185 ssq~lp~~g~~IrdlafSp~~~GLl~~asl~nk-iki~dlet~~~vssy~a~~~~wSC~w 243 (463)
T KOG1645|consen 185 SSQILPGEGSFIRDLAFSPFNEGLLGLASLGNK-IKIMDLETSCVVSSYIAYNQIWSCCW 243 (463)
T ss_pred hhhcccccchhhhhhccCccccceeeeeccCce-EEEEecccceeeeheeccCCceeeee
Confidence 4456678888999999999766 7888899998 99999999999999888888888888
No 220
>KOG2695|consensus
Probab=97.05 E-value=0.0018 Score=42.61 Aligned_cols=63 Identities=16% Similarity=0.146 Sum_probs=47.2
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEE--EEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELA--CLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~--~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
++. +||++-...+ +.++++.+|-+.-. -+-..+....+++++.|.. .|||.+++|..+.+++.
T Consensus 322 kik-LyD~R~~K~~--~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcy-tRiWsl~~ghLl~tipf 386 (425)
T KOG2695|consen 322 KIK-LYDLRATKCK--KSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCY-TRIWSLDSGHLLCTIPF 386 (425)
T ss_pred cee-Eeeehhhhcc--cceeeeecccccccccccccccccceEEEccCeeE-EEEEecccCceeeccCC
Confidence 356 8999887622 24888999965433 2344666678888999999 99999999999888764
No 221
>KOG1963|consensus
Probab=97.00 E-value=0.0031 Score=45.05 Aligned_cols=54 Identities=19% Similarity=0.362 Sum_probs=42.9
Q ss_pred CCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 18 SSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 18 ~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
....+.+.=|.++|++++|++||.+|++|+..+. .-+|...+++. +-+++-..+
T Consensus 241 ~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~V-Lv~Wq~~T~~k-qfLPRLgs~ 294 (792)
T KOG1963|consen 241 SETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGV-LVLWQLETGKK-QFLPRLGSP 294 (792)
T ss_pred cccceEEEecccccceeEEecCCceEeecccceE-EEEEeecCCCc-ccccccCCe
Confidence 3456666678889999999999999999999998 99999998873 444443343
No 222
>KOG4227|consensus
Probab=96.98 E-value=0.00075 Score=45.19 Aligned_cols=40 Identities=15% Similarity=0.334 Sum_probs=35.0
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
+.+-+.+|.+-|+++.||..|.+|++|+.|.. +++|.+..
T Consensus 48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~-~~~W~~de 87 (609)
T KOG4227|consen 48 CQKDVREHTGCINALQFSHNDRFLASGGDDMH-GRVWNVDE 87 (609)
T ss_pred hhhhhhhhccccceeeeccCCeEEeecCCcce-eeeechHH
Confidence 34445789999999999999999999999999 99998763
No 223
>KOG1409|consensus
Probab=96.97 E-value=0.0027 Score=41.72 Aligned_cols=54 Identities=22% Similarity=0.393 Sum_probs=43.9
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEE-EEeeCCCCC
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQL-VELRRGSDP 73 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~-~~~~~~~~~ 73 (78)
..+.++.+|.+++.+.+|.|....|.++.+|.. +.+||+.-++-+ .++.+|.+.
T Consensus 188 ~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~-vi~wdigg~~g~~~el~gh~~k 242 (404)
T KOG1409|consen 188 QLITTFNGHTGEVTCLKWDPGQRLLFSGASDHS-VIMWDIGGRKGTAYELQGHNDK 242 (404)
T ss_pred ceEEEEcCcccceEEEEEcCCCcEEEeccccCc-eEEEeccCCcceeeeeccchhh
Confidence 478889999999999999998899999999999 999998755433 444454443
No 224
>PRK01742 tolB translocation protein TolB; Provisional
Probab=96.95 E-value=0.0086 Score=39.90 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=23.3
Q ss_pred EEEEEECCCCCEEEEEc-CCCCEEEEe--eCCCCcE
Q psy1940 31 LACLALNQTGTMIATAS-SKGTLIRVW--DTLKKVQ 63 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~-~d~~~i~i~--d~~~~~~ 63 (78)
...++|+|||+.|+.++ .++. +.|| |+.++..
T Consensus 250 ~~~~~wSPDG~~La~~~~~~g~-~~Iy~~d~~~~~~ 284 (429)
T PRK01742 250 NGAPAFSPDGSRLAFASSKDGV-LNIYVMGANGGTP 284 (429)
T ss_pred cCceeECCCCCEEEEEEecCCc-EEEEEEECCCCCe
Confidence 34689999999888764 6787 7766 6655554
No 225
>PRK04922 tolB translocation protein TolB; Provisional
Probab=96.95 E-value=0.005 Score=41.04 Aligned_cols=43 Identities=23% Similarity=0.199 Sum_probs=33.7
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCC---CCEEEEeeCCCCcE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSK---GTLIRVWDTLKKVQ 63 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d---~~~i~i~d~~~~~~ 63 (78)
..+.+..+...+.+.+|+|||+.|+..+.+ .. +.+||+.++..
T Consensus 195 ~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~-l~~~dl~~g~~ 240 (433)
T PRK04922 195 NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSA-IYVQDLATGQR 240 (433)
T ss_pred CceEeecCCCccccccCCCCCCEEEEEecCCCCcE-EEEEECCCCCE
Confidence 455666777788999999999999987633 36 88999988764
No 226
>KOG2048|consensus
Probab=96.86 E-value=0.011 Score=41.55 Aligned_cols=54 Identities=15% Similarity=0.222 Sum_probs=46.7
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVE 66 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~ 66 (78)
-||+.+.. ....+....++|++++.+|.++.++.+++||. +..++..+++..+.
T Consensus 94 EwDl~~lk-----~~~~~d~~gg~IWsiai~p~~~~l~IgcddGv-l~~~s~~p~~I~~~ 147 (691)
T KOG2048|consen 94 EWDLHTLK-----QKYNIDSNGGAIWSIAINPENTILAIGCDDGV-LYDFSIGPDKITYK 147 (691)
T ss_pred EEecccCc-----eeEEecCCCcceeEEEeCCccceEEeecCCce-EEEEecCCceEEEE
Confidence 58988876 77888888999999999999999999999997 99999888765544
No 227
>PRK02889 tolB translocation protein TolB; Provisional
Probab=96.85 E-value=0.011 Score=39.50 Aligned_cols=44 Identities=16% Similarity=0.097 Sum_probs=33.7
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCC---CCEEEEeeCCCCcEE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSK---GTLIRVWDTLKKVQL 64 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d---~~~i~i~d~~~~~~~ 64 (78)
..+.+..+...+.+.+|+|||+.|+..+.+ .. |.+||+.+++..
T Consensus 187 ~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~-I~~~dl~~g~~~ 233 (427)
T PRK02889 187 NAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPV-VYVHDLATGRRR 233 (427)
T ss_pred CceEeccCCCCcccceEcCCCCEEEEEEccCCCcE-EEEEECCCCCEE
Confidence 445566677889999999999999876532 35 889999888653
No 228
>KOG1334|consensus
Probab=96.85 E-value=0.0011 Score=45.05 Aligned_cols=51 Identities=22% Similarity=0.391 Sum_probs=43.6
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
....+..|.+-++.|.|+..|+.|++++.|.. |.+||=.++.....++.++
T Consensus 134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~-vv~WdW~~~~~~l~f~SGH 184 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQ-VVVWDWVSGSPKLSFESGH 184 (559)
T ss_pred hhhcccCCCCccceeeecccCceeeccCccce-EEeehhhccCccccccccc
Confidence 45667899999999999999999999999999 9999988777766666443
No 229
>KOG0771|consensus
Probab=96.84 E-value=0.0054 Score=40.80 Aligned_cols=42 Identities=17% Similarity=0.392 Sum_probs=36.4
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
...|++++-|+||++++.|+.||. |.|++..+-+.++..+..
T Consensus 281 ~~siSsl~VS~dGkf~AlGT~dGs-Vai~~~~~lq~~~~vk~a 322 (398)
T KOG0771|consen 281 FKSISSLAVSDDGKFLALGTMDGS-VAIYDAKSLQRLQYVKEA 322 (398)
T ss_pred cCcceeEEEcCCCcEEEEeccCCc-EEEEEeceeeeeEeehhh
Confidence 357899999999999999999999 999999887777766643
No 230
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=96.84 E-value=0.011 Score=26.47 Aligned_cols=39 Identities=21% Similarity=0.274 Sum_probs=30.6
Q ss_pred CCCCEEEEEc-CCCCEEEEeeCCCCcEEEEeeCCCCCeEEe
Q psy1940 38 QTGTMIATAS-SKGTLIRVWDTLKKVQLVELRRGSDPATLY 77 (78)
Q Consensus 38 ~dg~~l~s~~-~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~ 77 (78)
|+|++|+++. .++. |.++|..++..+..++-+..|..++
T Consensus 1 pd~~~lyv~~~~~~~-v~~id~~~~~~~~~i~vg~~P~~i~ 40 (42)
T TIGR02276 1 PDGTKLYVTNSGSNT-VSVIDTATNKVIATIPVGGYPFGVA 40 (42)
T ss_pred CCCCEEEEEeCCCCE-EEEEECCCCeEEEEEECCCCCceEE
Confidence 6788777665 4566 9999999999999998877777654
No 231
>KOG2110|consensus
Probab=96.80 E-value=0.0077 Score=39.80 Aligned_cols=50 Identities=10% Similarity=0.166 Sum_probs=38.5
Q ss_pred EEEcccCCcCCCCCcEEecCCc--cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQ--SELACLALNQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~--~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
+|.+.+++ .+..|+... -.|.+++|+||+.+|++.+..++ |.+|.+....
T Consensus 200 Vf~v~~G~-----kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeT-VHiFKL~~~~ 251 (391)
T KOG2110|consen 200 VFSVPEGQ-----KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTET-VHIFKLEKVS 251 (391)
T ss_pred EEEcCCcc-----EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCe-EEEEEecccc
Confidence 56665554 777776443 24679999999999999999999 9999876543
No 232
>KOG0642|consensus
Probab=96.79 E-value=0.0022 Score=44.13 Aligned_cols=51 Identities=22% Similarity=0.412 Sum_probs=43.4
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
+.++...+|...+.++++.|.|-+|++++.|+. +++|....-.++.....|
T Consensus 522 ~~l~s~~a~~~svtslai~~ng~~l~s~s~d~s-v~l~kld~k~~~~es~~~ 572 (577)
T KOG0642|consen 522 KILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGS-VRLWKLDVKTCVLESTAH 572 (577)
T ss_pred ccchheeeccceecceeecCCCceEEeecCCce-eehhhccchheeeccccc
Confidence 377888899999999999999999999999999 999988766666555444
No 233
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.69 E-value=0.016 Score=38.16 Aligned_cols=59 Identities=14% Similarity=0.154 Sum_probs=41.7
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcC----------CCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASS----------KGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~----------d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
++|..+.+ .+.+++....+- .+ +||||+.|+.+.. +.. |.+||+.+.+.+.+++-..+|
T Consensus 31 ViD~~~~~-----v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~-V~v~D~~t~~~~~~i~~p~~p 99 (352)
T TIGR02658 31 TIDGEAGR-----VLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDY-VEVIDPQTHLPIADIELPEGP 99 (352)
T ss_pred EEECCCCE-----EEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCE-EEEEECccCcEEeEEccCCCc
Confidence 44555443 566666443332 24 9999999998866 556 999999999999888865543
No 234
>KOG2055|consensus
Probab=96.66 E-value=0.0073 Score=40.97 Aligned_cols=40 Identities=10% Similarity=0.282 Sum_probs=35.3
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
.+.|..+.|+.||+.|++++.+|. |-+||++...+++.+-
T Consensus 344 eG~v~~~~fsSdsk~l~~~~~~Ge-V~v~nl~~~~~~~rf~ 383 (514)
T KOG2055|consen 344 EGVVSDFTFSSDSKELLASGGTGE-VYVWNLRQNSCLHRFV 383 (514)
T ss_pred ccEEeeEEEecCCcEEEEEcCCce-EEEEecCCcceEEEEe
Confidence 345778999999999999999999 9999999998887774
No 235
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=96.64 E-value=0.014 Score=38.16 Aligned_cols=44 Identities=23% Similarity=0.191 Sum_probs=33.4
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCC---CCEEEEeeCCCCcEE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSK---GTLIRVWDTLKKVQL 64 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d---~~~i~i~d~~~~~~~ 64 (78)
..+.+..+...+.+.+|+|||++|+..+.+ .. |.+||+.++...
T Consensus 181 ~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~-i~v~d~~~g~~~ 227 (417)
T TIGR02800 181 NPQTITRSREPILSPAWSPDGQKLAYVSFESGKPE-IYVQDLATGQRE 227 (417)
T ss_pred CCEEeecCCCceecccCCCCCCEEEEEEcCCCCcE-EEEEECCCCCEE
Confidence 445555666678889999999999887644 36 999999887543
No 236
>KOG1240|consensus
Probab=96.63 E-value=0.0024 Score=47.54 Aligned_cols=41 Identities=24% Similarity=0.471 Sum_probs=34.7
Q ss_pred CCcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCC
Q psy1940 19 SSPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~ 60 (78)
..+..+..|+..+..++-+++ +.+++|||.||+ |++||.+.
T Consensus 1039 ~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGt-VKvW~~~k 1080 (1431)
T KOG1240|consen 1039 ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGT-VKVWNLRK 1080 (1431)
T ss_pred eEeehhhhccccccceeecCCCCceEEEecCCce-EEEeeehh
Confidence 467788889888888887765 599999999999 99999773
No 237
>KOG0280|consensus
Probab=96.62 E-value=0.006 Score=39.42 Aligned_cols=44 Identities=18% Similarity=0.307 Sum_probs=36.9
Q ss_pred CcEEecCCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCC-CCcEE
Q psy1940 20 SPVTINAHQSELACLALNQ-TGTMIATASSKGTLIRVWDTL-KKVQL 64 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~-~~~~~ 64 (78)
.+++.+.|+-+++..+|+. +-+.+++|+.|+. +..||++ ++..+
T Consensus 157 ~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~-l~~~D~R~p~~~i 202 (339)
T KOG0280|consen 157 KVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGS-LSCWDIRIPKTFI 202 (339)
T ss_pred ecccccccceeeeeeecccCCCceEEecCCCce-EEEEEecCCccee
Confidence 4557789999999999987 5579999999999 9999999 55544
No 238
>KOG1645|consensus
Probab=96.61 E-value=0.0091 Score=40.02 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=43.4
Q ss_pred ceeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCC-CEEEEEcCCCCEEEEeeCCCC
Q psy1940 2 LYLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTG-TMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 2 ~~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg-~~l~s~~~d~~~i~i~d~~~~ 61 (78)
.+++ |.|+++.. ++.++..| .++++.+|..|. .++++|...|. |.|||++..
T Consensus 216 nkik-i~dlet~~-----~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~-VlvyD~R~~ 268 (463)
T KOG1645|consen 216 NKIK-IMDLETSC-----VVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGM-VLVYDMRQP 268 (463)
T ss_pred ceEE-EEecccce-----eeeheecc-CCceeeeeccCCcceeEEeccCce-EEEEEccCC
Confidence 3677 88999887 77888888 789999998864 68888999998 999999854
No 239
>KOG1523|consensus
Probab=96.58 E-value=0.012 Score=38.44 Aligned_cols=56 Identities=20% Similarity=0.319 Sum_probs=45.5
Q ss_pred EEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC---cEEEEeeCCCCCeE-EeC
Q psy1940 22 VTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK---VQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 22 ~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~---~~~~~~~~~~~~~~-~~w 78 (78)
+.|..-..+|+|-+|++|++.+|.+..... +.||..... +..+++..|...++ ++|
T Consensus 4 ~~~~~~~~pitchAwn~drt~iAv~~~~~e-vhiy~~~~~~~w~~~htls~Hd~~vtgvdW 63 (361)
T KOG1523|consen 4 VVFHRLLEPITCHAWNSDRTQIAVSPNNHE-VHIYSMLGADLWEPAHTLSEHDKIVTGVDW 63 (361)
T ss_pred EEeeeccCceeeeeecCCCceEEeccCCce-EEEEEecCCCCceeceehhhhCcceeEEee
Confidence 344445678999999999999999999998 999987654 46788888888877 776
No 240
>PRK03629 tolB translocation protein TolB; Provisional
Probab=96.56 E-value=0.028 Score=37.61 Aligned_cols=43 Identities=9% Similarity=0.157 Sum_probs=31.8
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEc---CCCCEEEEeeCCCCcE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATAS---SKGTLIRVWDTLKKVQ 63 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~---~d~~~i~i~d~~~~~~ 63 (78)
..+.+..+...+.+.+|||||+.|+..+ .+.. +.++|+.+|+.
T Consensus 190 ~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~-i~i~dl~~G~~ 235 (429)
T PRK03629 190 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSA-LVIQTLANGAV 235 (429)
T ss_pred CCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcE-EEEEECCCCCe
Confidence 3445555667889999999999998654 2345 88999988753
No 241
>KOG1064|consensus
Probab=96.49 E-value=0.002 Score=49.73 Aligned_cols=58 Identities=16% Similarity=0.220 Sum_probs=45.7
Q ss_pred eEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 6 CSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 6 ~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
|+||..-.. +..+++ ..|.+..+++++-|.-..|.+|+.+|. |.+||++..+.++.++
T Consensus 2318 ~lwDtl~~~--~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~-v~l~D~rqrql~h~~~ 2375 (2439)
T KOG1064|consen 2318 CLWDTLLPP--MNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGE-VCLFDIRQRQLRHTFQ 2375 (2439)
T ss_pred cchhcccCc--ccceee--eecCCCceEEEEcCcceEEEecCCcCc-EEEeehHHHHHHHHhh
Confidence 467765433 223444 789999999999999999999999999 9999999777665554
No 242
>KOG1310|consensus
Probab=96.47 E-value=0.01 Score=41.36 Aligned_cols=48 Identities=10% Similarity=0.167 Sum_probs=41.0
Q ss_pred EEEcccCCcCCCCCcEEec-CCccCEEEEEECC--CCCEEEEEcCCCCEEEEeeCCC
Q psy1940 7 SQDLSSTELSSSSSPVTIN-AHQSELACLALNQ--TGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~-~h~~~i~~v~fs~--dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
|||..... ..+.+. +|..-|-|+.|-| ..+.+++|..|.. |++||+.+
T Consensus 76 vWd~~~~K-----llhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~-i~lfdl~~ 126 (758)
T KOG1310|consen 76 VWDPFEYK-----LLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKL-IKLFDLDS 126 (758)
T ss_pred eecchhcc-----eeeeeecccccceeEEeeeccCCCeEEEeccCcce-EEEEeccc
Confidence 88887654 778776 8999999999999 4568889999999 99999885
No 243
>KOG1523|consensus
Probab=96.46 E-value=0.01 Score=38.75 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=37.7
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
+..+++..|...|+.|.|+|..+.|++++.|.. ..+|...++
T Consensus 46 ~~~htls~Hd~~vtgvdWap~snrIvtcs~drn-ayVw~~~~~ 87 (361)
T KOG1523|consen 46 EPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRN-AYVWTQPSG 87 (361)
T ss_pred eeceehhhhCcceeEEeecCCCCceeEccCCCC-ccccccCCC
Confidence 467889999999999999999999999999999 999987443
No 244
>PRK03629 tolB translocation protein TolB; Provisional
Probab=96.46 E-value=0.025 Score=37.83 Aligned_cols=38 Identities=21% Similarity=0.149 Sum_probs=26.4
Q ss_pred CEEEEEECCCCCEEEEE-cCCC--CEEEEeeCCCCcEEEEee
Q psy1940 30 ELACLALNQTGTMIATA-SSKG--TLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~-~~d~--~~i~i~d~~~~~~~~~~~ 68 (78)
.....+|||||+.|+.. +.++ . |.+||+.++.......
T Consensus 244 ~~~~~~~SPDG~~La~~~~~~g~~~-I~~~d~~tg~~~~lt~ 284 (429)
T PRK03629 244 HNGAPAFSPDGSKLAFALSKTGSLN-LYVMDLASGQIRQVTD 284 (429)
T ss_pred CcCCeEECCCCCEEEEEEcCCCCcE-EEEEECCCCCEEEccC
Confidence 34568999999988854 4444 5 7788998876544433
No 245
>PRK05137 tolB translocation protein TolB; Provisional
Probab=96.38 E-value=0.025 Score=37.72 Aligned_cols=52 Identities=13% Similarity=0.084 Sum_probs=33.3
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEE-EEcCCCC-EEEEeeCCCCcEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIA-TASSKGT-LIRVWDTLKKVQL 64 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~-s~~~d~~-~i~i~d~~~~~~~ 64 (78)
+||+..+ ....+..+.+.+.+.+|+|||+.|+ +.+.++. -|.++|+.++...
T Consensus 230 ~~dl~~g------~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~ 283 (435)
T PRK05137 230 LLDLETG------QRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT 283 (435)
T ss_pred EEECCCC------cEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE
Confidence 5566543 2344555666777899999999876 5555554 0555688777553
No 246
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=96.37 E-value=0.024 Score=36.17 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=30.6
Q ss_pred CEEEEEECCCCCEEEEEcC-CCCEEEEeeCC--CCc--EEEEeeCCCCCeE
Q psy1940 30 ELACLALNQTGTMIATASS-KGTLIRVWDTL--KKV--QLVELRRGSDPAT 75 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~-d~~~i~i~d~~--~~~--~~~~~~~~~~~~~ 75 (78)
....++|+|||++|+++.. +++ |.+|++. ++. .+..+..+..|..
T Consensus 275 ~p~~~~~~~dg~~l~va~~~~~~-v~v~~~~~~~g~l~~~~~~~~g~~P~~ 324 (330)
T PRK11028 275 QPRGFNIDHSGKYLIAAGQKSHH-ISVYEIDGETGLLTELGRYAVGQGPMW 324 (330)
T ss_pred cCCceEECCCCCEEEEEEccCCc-EEEEEEcCCCCcEEEccccccCCCceE
Confidence 3457899999999998775 788 9999764 343 3344444445543
No 247
>KOG2106|consensus
Probab=96.33 E-value=0.034 Score=38.41 Aligned_cols=63 Identities=13% Similarity=0.193 Sum_probs=43.9
Q ss_pred EEEcccCCcCCCCCcEEecCC-ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAH-QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h-~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
.|+.+... -.+....|..+ +.-|.|+.|.++|. ++||..+|. |.||+..+.+..+....|...
T Consensus 226 Fw~~~~~~--l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~-i~Iw~~~~~~~~k~~~aH~gg 289 (626)
T KOG2106|consen 226 FWTLRGGS--LVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGN-ILIWSKGTNRISKQVHAHDGG 289 (626)
T ss_pred EEEccCCc--eEEEeeccccccceEEEEEEEcCCCC-EEeecCCce-EEEEeCCCceEEeEeeecCCc
Confidence 57666544 11234445443 45789999999997 679999999 999999877666665555443
No 248
>KOG1587|consensus
Probab=96.32 E-value=0.006 Score=42.36 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=43.5
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC-CCcEEEEeeCCCCCeE-EeC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL-KKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~-~~~~~~~~~~~~~~~~-~~w 78 (78)
....+..|.++|+++.++|-+..+...+.|.+ ++||... ...++..+..+.+.+. +.|
T Consensus 390 ~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~-vriWs~~~~~~Pl~~~~~~~~~v~~vaW 449 (555)
T KOG1587|consen 390 GHSTFITHIGPVYAVSRNPFYPKNFLSVGDWT-VRIWSEDVIASPLLSLDSSPDYVTDVAW 449 (555)
T ss_pred ccccccccCcceEeeecCCCccceeeeeccce-eEeccccCCCCcchhhhhccceeeeeEE
Confidence 34567789999999999998866665555999 9999877 5667766666666443 555
No 249
>KOG3914|consensus
Probab=96.31 E-value=0.0078 Score=39.94 Aligned_cols=48 Identities=23% Similarity=0.146 Sum_probs=37.4
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
+...+-+|-..+..|+++||++++.++..|.. ||+-.......+..+.
T Consensus 143 ~~~~~lGhvSml~dVavS~D~~~IitaDRDEk-IRvs~ypa~f~Iesfc 190 (390)
T KOG3914|consen 143 RCEPILGHVSMLLDVAVSPDDQFIITADRDEK-IRVSRYPATFVIESFC 190 (390)
T ss_pred CcchhhhhhhhhheeeecCCCCEEEEecCCce-EEEEecCcccchhhhc
Confidence 34445689999999999999999999999999 9997655444444443
No 250
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.30 E-value=0.065 Score=34.82 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=39.9
Q ss_pred eeeeEEEcccCCc---CCCCCcEEecCCccCEEEEEECCCCCEEEEEcC-----CCCEEEEeeCC-CCcEEEEeeCC
Q psy1940 3 YLQCSQDLSSTEL---SSSSSPVTINAHQSELACLALNQTGTMIATASS-----KGTLIRVWDTL-KKVQLVELRRG 70 (78)
Q Consensus 3 ~~~~i~d~~~~~~---~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~-----d~~~i~i~d~~-~~~~~~~~~~~ 70 (78)
|+. +||.++... .....-+.|.+| ..||+||++|++... .|. |-|||.. +-..+.+++.+
T Consensus 29 ~~~-v~D~~~g~~~~~~~a~~gRHFyGH------g~fs~dG~~LytTEnd~~~g~G~-IgVyd~~~~~~ri~E~~s~ 97 (305)
T PF07433_consen 29 FAL-VFDCRTGQLLQRLWAPPGRHFYGH------GVFSPDGRLLYTTENDYETGRGV-IGVYDAARGYRRIGEFPSH 97 (305)
T ss_pred EEE-EEEcCCCceeeEEcCCCCCEEecC------EEEcCCCCEEEEeccccCCCcEE-EEEEECcCCcEEEeEecCC
Confidence 456 788877651 111233344455 679999999998643 466 9999998 45677777643
No 251
>PRK04922 tolB translocation protein TolB; Provisional
Probab=96.23 E-value=0.044 Score=36.61 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=27.2
Q ss_pred ecCCccCEEEEEECCCCCEEE-EEcCCC--CEEEEeeCCCCcEE
Q psy1940 24 INAHQSELACLALNQTGTMIA-TASSKG--TLIRVWDTLKKVQL 64 (78)
Q Consensus 24 ~~~h~~~i~~v~fs~dg~~l~-s~~~d~--~~i~i~d~~~~~~~ 64 (78)
+..+.+...+.+|+|||+.|+ +.+.++ . |.+||+.++...
T Consensus 243 l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~-Iy~~d~~~g~~~ 285 (433)
T PRK04922 243 VASFRGINGAPSFSPDGRRLALTLSRDGNPE-IYVMDLGSRQLT 285 (433)
T ss_pred eccCCCCccCceECCCCCEEEEEEeCCCCce-EEEEECCCCCeE
Confidence 333444455789999999776 444444 5 888899887653
No 252
>KOG1963|consensus
Probab=96.16 E-value=0.031 Score=40.23 Aligned_cols=61 Identities=20% Similarity=0.310 Sum_probs=50.3
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCC---CEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTG---TMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg---~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
++ +|-..++. +++.+..|..++.++.+.|.. .++.+++.||. |++||-..+..+..+..+.
T Consensus 39 V~-VyS~~Tg~-----~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~-I~vwd~~~~~Llkt~~~~~ 102 (792)
T KOG1963|consen 39 VK-VYSTATGE-----CITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGT-IRVWDWSDGELLKTFDNNL 102 (792)
T ss_pred EE-EEecchHh-----hhhhcccccCccceeeecCCCccceEEEEEecCcc-EEEecCCCcEEEEEEecCC
Confidence 45 67766666 888999999999999887743 47779999999 9999999999988887543
No 253
>PRK00178 tolB translocation protein TolB; Provisional
Probab=96.16 E-value=0.043 Score=36.40 Aligned_cols=43 Identities=19% Similarity=0.085 Sum_probs=32.4
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCC---CCEEEEeeCCCCcE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSK---GTLIRVWDTLKKVQ 63 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d---~~~i~i~d~~~~~~ 63 (78)
..+.+..+...+.+.+|||||+.|+..+.+ .. |.+||+.++..
T Consensus 190 ~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~-l~~~~l~~g~~ 235 (430)
T PRK00178 190 RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPR-IFVQNLDTGRR 235 (430)
T ss_pred CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCE-EEEEECCCCCE
Confidence 445566677788999999999999876533 35 88889987754
No 254
>KOG0974|consensus
Probab=96.12 E-value=0.015 Score=42.43 Aligned_cols=58 Identities=21% Similarity=0.161 Sum_probs=43.4
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
+. +|++.+.+ ....+.-+|...+..+.|.|. .++|+++|.+ .|+|+.+ +..+.++..|
T Consensus 199 iR-lW~i~s~~----~~~~~~fgHsaRvw~~~~~~n--~i~t~gedct-crvW~~~-~~~l~~y~~h 256 (967)
T KOG0974|consen 199 IR-LWPIDSRE----VLGCTGFGHSARVWACCFLPN--RIITVGEDCT-CRVWGVN-GTQLEVYDEH 256 (967)
T ss_pred ee-eeeccccc----ccCcccccccceeEEEEeccc--eeEEeccceE-EEEEecc-cceehhhhhh
Confidence 35 78888876 222345589999999999988 8999999999 9999654 4444455443
No 255
>KOG2315|consensus
Probab=96.11 E-value=0.012 Score=40.60 Aligned_cols=51 Identities=18% Similarity=0.300 Sum_probs=35.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcC------CCCEEEEeeCCCCcEEEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASS------KGTLIRVWDTLKKVQLVE 66 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~------d~~~i~i~d~~~~~~~~~ 66 (78)
+||+.+.. ++..+..... .-..|+|||.+++|+.. |.. ++||+.. |+.+++
T Consensus 340 vwDv~n~K-----~i~~~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg-~Kiwhyt-G~~l~~ 396 (566)
T KOG2315|consen 340 VWDVPNRK-----LIAKFKAANT--TVFEWSPDGEYFLTATTAPRLRVDNG-IKIWHYT-GSLLHE 396 (566)
T ss_pred EEeccchh-----hccccccCCc--eEEEEcCCCcEEEEEeccccEEecCC-eEEEEec-Cceeeh
Confidence 78888754 7766654432 34689999999999854 566 8899864 555443
No 256
>PRK02889 tolB translocation protein TolB; Provisional
Probab=96.03 E-value=0.054 Score=36.18 Aligned_cols=45 Identities=16% Similarity=0.283 Sum_probs=29.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEE-EEcCCCCEEEEeeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIA-TASSKGTLIRVWDT 58 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~-s~~~d~~~i~i~d~ 58 (78)
+||+..+. ...+....+...+.+|+|||+.|+ +.+.++. ..+|.+
T Consensus 224 ~~dl~~g~------~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~-~~Iy~~ 269 (427)
T PRK02889 224 VHDLATGR------RRVVANFKGSNSAPAWSPDGRTLAVALSRDGN-SQIYTV 269 (427)
T ss_pred EEECCCCC------EEEeecCCCCccceEECCCCCEEEEEEccCCC-ceEEEE
Confidence 55765443 222333344556889999999887 5677887 777754
No 257
>KOG1832|consensus
Probab=96.01 E-value=0.016 Score=42.65 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=48.3
Q ss_pred CCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+...+|+-|.....|++|+-+.++|+.|+..|. |+++++.+|........|..+++
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Ge-ik~~nv~sG~~e~s~ncH~SavT 1147 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGE-IKIFNVSSGSMEESVNCHQSAVT 1147 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccce-EEEEEccCccccccccccccccc
Confidence 467788888889999999999999999999999 99999999987777776666554
No 258
>KOG4532|consensus
Probab=96.01 E-value=0.085 Score=34.07 Aligned_cols=63 Identities=13% Similarity=0.087 Sum_probs=42.8
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCC--EEEEEcCCCCEEEEeeCCCCcEEEEe
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGT--MIATASSKGTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~--~l~s~~~d~~~i~i~d~~~~~~~~~~ 67 (78)
|+. |||+++-..-+.....+=+.|.+.+....|++.|. +|.-...-+. +.+-|+++++..+.+
T Consensus 226 ~~~-I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~-~hv~D~R~~~~~q~I 290 (344)
T KOG4532|consen 226 TCA-IYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSR-VHVVDTRNYVNHQVI 290 (344)
T ss_pred cEE-EEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcce-EEEEEcccCceeeEE
Confidence 455 99999876333333333356899999999998653 5555555566 889999988644433
No 259
>PRK01029 tolB translocation protein TolB; Provisional
Probab=96.00 E-value=0.073 Score=35.74 Aligned_cols=44 Identities=23% Similarity=0.255 Sum_probs=30.9
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCC---CCEEEEeeCCCCcEEE
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSK---GTLIRVWDTLKKVQLV 65 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d---~~~i~i~d~~~~~~~~ 65 (78)
...+..+...+...+|||||+.|+..+.+ .. |.+||+.+++...
T Consensus 319 ~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~-I~v~dl~~g~~~~ 365 (428)
T PRK01029 319 PRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQ-ICVYDLATGRDYQ 365 (428)
T ss_pred eEEeccCCCCccceeECCCCCEEEEEEcCCCCcE-EEEEECCCCCeEE
Confidence 34444445566788999999998876543 35 8899998886543
No 260
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=95.92 E-value=0.052 Score=34.63 Aligned_cols=30 Identities=7% Similarity=0.213 Sum_probs=25.2
Q ss_pred CEEEEEECCCCCEEEEEcC-CCCEEEEeeCCC
Q psy1940 30 ELACLALNQTGTMIATASS-KGTLIRVWDTLK 60 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~-d~~~i~i~d~~~ 60 (78)
....++|+|||++++++.+ ++. |.+||+..
T Consensus 176 ~p~~~~~~pdg~~lyv~~~~~~~-v~v~~~~~ 206 (330)
T PRK11028 176 GPRHMVFHPNQQYAYCVNELNSS-VDVWQLKD 206 (330)
T ss_pred CCceEEECCCCCEEEEEecCCCE-EEEEEEeC
Confidence 3567999999999988876 777 99999873
No 261
>PRK00178 tolB translocation protein TolB; Provisional
Probab=95.87 E-value=0.075 Score=35.24 Aligned_cols=37 Identities=22% Similarity=0.197 Sum_probs=25.5
Q ss_pred CccCEEEEEECCCCCEEE-EEcCCC--CEEEEeeCCCCcEE
Q psy1940 27 HQSELACLALNQTGTMIA-TASSKG--TLIRVWDTLKKVQL 64 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~-s~~~d~--~~i~i~d~~~~~~~ 64 (78)
..+.....+|+|||+.|+ +.+.++ . |.++|+.++...
T Consensus 241 ~~g~~~~~~~SpDG~~la~~~~~~g~~~-Iy~~d~~~~~~~ 280 (430)
T PRK00178 241 FEGLNGAPAWSPDGSKLAFVLSKDGNPE-IYVMDLASRQLS 280 (430)
T ss_pred CCCCcCCeEECCCCCEEEEEEccCCCce-EEEEECCCCCeE
Confidence 334455789999999887 444454 4 777798877643
No 262
>KOG4547|consensus
Probab=95.79 E-value=0.022 Score=39.34 Aligned_cols=49 Identities=20% Similarity=0.417 Sum_probs=36.8
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCC-----CCEEEEEc-CCCCEEEEeeCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQT-----GTMIATAS-SKGTLIRVWDTL 59 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d-----g~~l~s~~-~d~~~i~i~d~~ 59 (78)
+. +||+.+.+ .+.+|.+|.++|++++|--+ |.++.++. .+.. +.+|-+.
T Consensus 166 ik-~~~~~~ke-----vv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~-i~~w~v~ 220 (541)
T KOG4547|consen 166 IK-VLDIETKE-----VVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERG-ITVWVVE 220 (541)
T ss_pred EE-EEEccCce-----EEEEecCCCcceEEEEEEEeccccccceeeeccccccc-eeEEEEE
Confidence 35 78888876 99999999999999999776 77776653 3333 6677544
No 263
>KOG0650|consensus
Probab=95.73 E-value=0.0045 Score=43.26 Aligned_cols=63 Identities=14% Similarity=0.110 Sum_probs=49.1
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC-cEEEEeeCCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK-VQLVELRRGSD 72 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~-~~~~~~~~~~~ 72 (78)
|+. |||+.... .++.+......|.+++.+|.|..|+.++.|+. +-+||+.-+ +..+.++.|.+
T Consensus 588 ~vR-iYdL~kqe-----lvKkL~tg~kwiS~msihp~GDnli~gs~d~k-~~WfDldlsskPyk~lr~H~~ 651 (733)
T KOG0650|consen 588 SVR-IYDLSKQE-----LVKKLLTGSKWISSMSIHPNGDNLILGSYDKK-MCWFDLDLSSKPYKTLRLHEK 651 (733)
T ss_pred ceE-EEehhHHH-----HHHHHhcCCeeeeeeeecCCCCeEEEecCCCe-eEEEEcccCcchhHHhhhhhh
Confidence 567 88887765 77777777778999999999999999999999 999998754 34455554443
No 264
>KOG4190|consensus
Probab=95.73 E-value=0.0051 Score=43.04 Aligned_cols=55 Identities=15% Similarity=0.274 Sum_probs=43.9
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC-------cEEEEeeCCCCCeE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK-------VQLVELRRGSDPAT 75 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~-------~~~~~~~~~~~~~~ 75 (78)
....|.+|+..|..++--.+.+.+++++.|++ +++|.+++. .|..++..|.++++
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKT-VKLWSik~EgD~~~tsaCQfTY~aHkk~i~ 788 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKT-VKLWSIKPEGDEIGTSACQFTYQAHKKPIH 788 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCce-EEEEEeccccCccccceeeeEhhhccCccc
Confidence 46678899999998866557778999999999 999988752 36678888887764
No 265
>KOG1517|consensus
Probab=95.60 E-value=0.054 Score=40.49 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=41.4
Q ss_pred EEEcccCCcCCCCCcEEecCCccC--EEEEEECCCCC-EEEEEcCCCCEEEEeeCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSE--LACLALNQTGT-MIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~--i~~v~fs~dg~-~l~s~~~d~~~i~i~d~~~ 60 (78)
+||.+-..+. ..+.+.+.|+.. |.-+.+.+.|- .|++|+.+|. |.+||++.
T Consensus 1235 vyD~R~a~~d--s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~-I~~~DlR~ 1288 (1387)
T KOG1517|consen 1235 VYDRRMAPPD--SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGD-IQLLDLRM 1288 (1387)
T ss_pred EeecccCCcc--ccceeecccCCcccceeEEeecCCCcceeeeccCCe-EEEEeccc
Confidence 6787765422 367778889887 99999998764 5999999999 99999997
No 266
>KOG2055|consensus
Probab=95.60 E-value=0.03 Score=38.17 Aligned_cols=65 Identities=17% Similarity=0.262 Sum_probs=47.5
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCC-ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCC
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAH-QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSD 72 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h-~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~ 72 (78)
|+- .||+....-. .+..+.++ +..+.....||++++|+.++..|. |.+.-..+++.+..++....
T Consensus 281 y~y-syDle~ak~~---k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~-I~lLhakT~eli~s~KieG~ 346 (514)
T KOG2055|consen 281 YLY-SYDLETAKVT---KLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGH-IHLLHAKTKELITSFKIEGV 346 (514)
T ss_pred EEE-Eeeccccccc---cccCCCCcccchhheeEecCCCCeEEEcccCce-EEeehhhhhhhhheeeeccE
Confidence 566 7999776522 22223344 445678888999999999999999 99999998888777665433
No 267
>KOG2315|consensus
Probab=95.57 E-value=0.09 Score=36.53 Aligned_cols=46 Identities=17% Similarity=0.350 Sum_probs=37.3
Q ss_pred EecCCccCEEEEEECCCCCEEEEEcCC---CCEEEEeeCCCCcEEEEeeC
Q psy1940 23 TINAHQSELACLALNQTGTMIATASSK---GTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 23 ~~~~h~~~i~~v~fs~dg~~l~s~~~d---~~~i~i~d~~~~~~~~~~~~ 69 (78)
.+.-..++=+++-|||.|+.++-++.+ |. +.|||+.+.+++..+..
T Consensus 306 v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~-mEvwDv~n~K~i~~~~a 354 (566)
T KOG2315|consen 306 VFDFPEGPRNTAFFNPHGNIILLAGFGNLPGD-MEVWDVPNRKLIAKFKA 354 (566)
T ss_pred eEeCCCCCccceEECCCCCEEEEeecCCCCCc-eEEEeccchhhcccccc
Confidence 344456777899999999999999877 57 99999999888777654
No 268
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=95.55 E-value=0.13 Score=33.64 Aligned_cols=39 Identities=23% Similarity=0.223 Sum_probs=26.6
Q ss_pred ecCCccCEEEEEECCCCCEEEE-EcCCC--CEEEEeeCCCCcE
Q psy1940 24 INAHQSELACLALNQTGTMIAT-ASSKG--TLIRVWDTLKKVQ 63 (78)
Q Consensus 24 ~~~h~~~i~~v~fs~dg~~l~s-~~~d~--~~i~i~d~~~~~~ 63 (78)
+..+.+.+.+.+|+|||+.|+. .+.++ . |.+||+.++..
T Consensus 229 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~-i~~~d~~~~~~ 270 (417)
T TIGR02800 229 VASFPGMNGAPAFSPDGSKLAVSLSKDGNPD-IYVMDLDGKQL 270 (417)
T ss_pred eecCCCCccceEECCCCCEEEEEECCCCCcc-EEEEECCCCCE
Confidence 4445556677899999997764 44443 5 77788887654
No 269
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=95.55 E-value=0.28 Score=31.88 Aligned_cols=71 Identities=13% Similarity=0.083 Sum_probs=40.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeC--CCCcEEEEe--eCCCCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDT--LKKVQLVEL--RRGSDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~--~~~~~~~~~--~~~~~~~~~~w 78 (78)
+|++.... +.-+.+..+.........++|+|+|++|+++..+...|.+|++ .+|.....- .....|+.+.|
T Consensus 271 vf~~d~~~-g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 271 VFDLDPAT-GTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEEECTTT-TTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred EEEEecCC-CceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 66763221 1112334444444456899999999999988655433888854 567654333 24556666654
No 270
>KOG4190|consensus
Probab=95.53 E-value=0.018 Score=40.42 Aligned_cols=61 Identities=18% Similarity=0.279 Sum_probs=46.4
Q ss_pred eeeeEEEcccCCc--CCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEe
Q psy1940 3 YLQCSQDLSSTEL--SSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 3 ~~~~i~d~~~~~~--~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~ 67 (78)
.++ +|.++.... +.+.|..+++.|+.+|+++.|-.|-+++++ .|+. |.+||.--|+.+..+
T Consensus 758 TVK-LWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~g-iHlWDPFigr~Laq~ 820 (1034)
T KOG4190|consen 758 TVK-LWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGG-IHLWDPFIGRLLAQM 820 (1034)
T ss_pred eEE-EEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCc-ceeecccccchhHhh
Confidence 356 888887642 333488889999999999999988887764 5677 999997766655433
No 271
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.49 E-value=0.063 Score=36.87 Aligned_cols=38 Identities=26% Similarity=0.362 Sum_probs=29.3
Q ss_pred CEEEEEECC----CCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 30 ELACLALNQ----TGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 30 ~i~~v~fs~----dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
...+++.++ +.++|++.+.|+. +|+||+.++.++....
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~-LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHT-LRIWSLETGQCLATID 257 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSE-EEEEETTTTCEEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCe-EEEEECCCCeEEEEec
Confidence 445566666 6789999999999 9999999999977654
No 272
>KOG2321|consensus
Probab=95.33 E-value=0.047 Score=38.27 Aligned_cols=47 Identities=19% Similarity=0.416 Sum_probs=38.6
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
+..|....++++++..++.-.+|++|+.+|. +..||.++...+..+.
T Consensus 168 L~P~~~~~~~lN~v~in~~hgLla~Gt~~g~-VEfwDpR~ksrv~~l~ 214 (703)
T KOG2321|consen 168 LNPFETDSGELNVVSINEEHGLLACGTEDGV-VEFWDPRDKSRVGTLD 214 (703)
T ss_pred ccccccccccceeeeecCccceEEecccCce-EEEecchhhhhheeee
Confidence 4445556689999999999999999999999 9999999876655554
No 273
>PRK04792 tolB translocation protein TolB; Provisional
Probab=95.07 E-value=0.13 Score=34.78 Aligned_cols=42 Identities=21% Similarity=0.156 Sum_probs=29.9
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCC-C--CEEEEeeCCCCcE
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSK-G--TLIRVWDTLKKVQ 63 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d-~--~~i~i~d~~~~~~ 63 (78)
.+.+..+..++.+.+|||||+.|+..+.+ + . |.++|+.+++.
T Consensus 210 ~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~-L~~~dl~tg~~ 254 (448)
T PRK04792 210 EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAE-IFVQDIYTQVR 254 (448)
T ss_pred ceEeecCCCcccCceECCCCCEEEEEEecCCCcE-EEEEECCCCCe
Confidence 34444556678889999999988876432 2 4 77789887754
No 274
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=95.02 E-value=0.21 Score=33.49 Aligned_cols=49 Identities=22% Similarity=0.387 Sum_probs=38.4
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC--CCCeEEeC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG--SDPATLYW 78 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~--~~~~~~~w 78 (78)
+++..++.||+|+++|--..+|. +.+.+..-.+.+.++.-. ..|..+.|
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~-l~v~ssDf~~~~~e~~~~~~~~p~~~~W 267 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGN-LWVVSSDFSEKLCEFDTDSKSPPKQMAW 267 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCC-EEEEECcccceeEEeecCcCCCCcEEEE
Confidence 57999999999999999999998 888876555555555543 66777777
No 275
>KOG4227|consensus
Probab=95.01 E-value=0.12 Score=35.10 Aligned_cols=62 Identities=11% Similarity=0.133 Sum_probs=46.4
Q ss_pred EEEcccCC-cCCCCCcEEec-CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 7 SQDLSSTE-LSSSSSPVTIN-AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 7 i~d~~~~~-~~~~~~~~~~~-~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+|.+.+.- ....|.+.... .|...|.|++|+...+.+++|+.+++ |...|+.+.+.+..+..
T Consensus 82 ~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~-VI~HDiEt~qsi~V~~~ 145 (609)
T KOG4227|consen 82 VWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT-VIKHDIETKQSIYVANE 145 (609)
T ss_pred eechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcce-eEeeecccceeeeeecc
Confidence 56555432 22335565554 45689999999999999999999999 99999998887766643
No 276
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.01 E-value=0.13 Score=33.89 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=33.8
Q ss_pred CcEEecCCccCEEEEEECCCCC-EEEEE-cCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 20 SPVTINAHQSELACLALNQTGT-MIATA-SSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~-~l~s~-~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
.+..+.. ..++.+|+.+.|.+ +|++. ..++. +.+||..+|+.++++++-
T Consensus 281 rv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~-l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 281 RVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGT-LDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp EEEEEEE-EEEESEEEEESSSS-EEEEEETTTTE-EEEEETTT--EEEEE---
T ss_pred EEEEEeC-CCccceEEEccCCCcEEEEEcCCCCe-EEEEeCcCCcEEeehhcc
Confidence 6666653 24688999999877 55444 55788 999999999999998753
No 277
>PRK01029 tolB translocation protein TolB; Provisional
Probab=94.90 E-value=0.35 Score=32.51 Aligned_cols=55 Identities=5% Similarity=0.032 Sum_probs=33.5
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcC---CCCEEEEeeCCCCcEEEEee
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASS---KGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~---d~~~i~i~d~~~~~~~~~~~ 68 (78)
+||+.... ...+......+....|+|||+.|+..+. +.. +.++|+.+++......
T Consensus 355 v~dl~~g~------~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~-L~~vdl~~g~~~~Lt~ 412 (428)
T PRK01029 355 VYDLATGR------DYQLTTSPENKESPSWAIDSLHLVYSAGNSNESE-LYLISLITKKTRKIVI 412 (428)
T ss_pred EEECCCCC------eEEccCCCCCccceEECCCCCEEEEEECCCCCce-EEEEECCCCCEEEeec
Confidence 55665432 2334333345677899999998875432 234 7788988776544443
No 278
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=94.85 E-value=0.28 Score=27.41 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=27.8
Q ss_pred EEEEEECC---CC-CEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 31 LACLALNQ---TG-TMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 31 i~~v~fs~---dg-~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
|+++++.. || +.|++|++|.. ||+|+- ...+.++.....+..|
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~-IRvf~~--~e~~~Ei~e~~~v~~L 48 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFE-IRVFKG--DEIVAEITETDKVTSL 48 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcE-EEEEeC--CcEEEEEecccceEEE
Confidence 34444433 44 58888999998 999863 3566666665555544
No 279
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=94.74 E-value=0.17 Score=32.90 Aligned_cols=41 Identities=24% Similarity=0.454 Sum_probs=31.8
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
.+.+-+|+++++|..+++.+-.+..+.+||..+++.+....
T Consensus 216 ~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~ 256 (305)
T PF07433_consen 216 NGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVP 256 (305)
T ss_pred CCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccc
Confidence 46788999999998776555544339999999998876654
No 280
>KOG1517|consensus
Probab=94.63 E-value=0.16 Score=38.11 Aligned_cols=63 Identities=19% Similarity=0.298 Sum_probs=42.7
Q ss_pred eeeEEEcccCCcCCCCCcEEec-CCccCEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCC---cEEEEeeCCCCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTIN-AHQSELACLALNQ-TGTMIATASSKGTLIRVWDTLKK---VQLVELRRGSDP 73 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~-~h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~---~~~~~~~~~~~~ 73 (78)
+. |||..... ..+-++ +...-+++++-+. .|+.+++|-.||+ +|+||.+.. ..+...+.|.+.
T Consensus 1189 IR-IWDa~~E~-----~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGs-vRvyD~R~a~~ds~v~~~R~h~~~ 1256 (1387)
T KOG1517|consen 1189 IR-IWDAHKEQ-----VVADIPYGSSTLVTALSADLVHGNIIAAGFADGS-VRVYDRRMAPPDSLVCVYREHNDV 1256 (1387)
T ss_pred EE-EEecccce-----eEeecccCCCccceeecccccCCceEEEeecCCc-eEEeecccCCccccceeecccCCc
Confidence 45 89987654 444444 3444566664433 4799999999999 999998854 345666666554
No 281
>PRK04792 tolB translocation protein TolB; Provisional
Probab=94.60 E-value=0.28 Score=33.15 Aligned_cols=33 Identities=24% Similarity=0.205 Sum_probs=22.6
Q ss_pred EEEEEECCCCCEEEE-EcCCCC-EEEEeeCCCCcE
Q psy1940 31 LACLALNQTGTMIAT-ASSKGT-LIRVWDTLKKVQ 63 (78)
Q Consensus 31 i~~v~fs~dg~~l~s-~~~d~~-~i~i~d~~~~~~ 63 (78)
....+|+|||+.|+. .+.++. -|.++|+.++..
T Consensus 264 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~ 298 (448)
T PRK04792 264 NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL 298 (448)
T ss_pred cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe
Confidence 346899999998875 455664 055568877654
No 282
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=94.54 E-value=0.6 Score=32.52 Aligned_cols=43 Identities=12% Similarity=0.133 Sum_probs=35.9
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQ 63 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~ 63 (78)
.++.+...-+.|.+++.+|||++++.+-.... +.+.|+.+|..
T Consensus 393 e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~e-l~vididngnv 435 (668)
T COG4946 393 EVKRIEKDLGNIEAVKVSPDGKKVVVANDRFE-LWVIDIDNGNV 435 (668)
T ss_pred eEEEeeCCccceEEEEEcCCCcEEEEEcCceE-EEEEEecCCCe
Confidence 56667777788999999999999998877777 88889998865
No 283
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=94.52 E-value=0.25 Score=34.52 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=28.0
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
-....++|.|+|..+++|++.|. +.+||+.-+
T Consensus 300 ~~P~~iaWHp~gai~~V~s~qGe-lQ~FD~ALs 331 (545)
T PF11768_consen 300 FIPTLIAWHPDGAIFVVGSEQGE-LQCFDMALS 331 (545)
T ss_pred ccceEEEEcCCCcEEEEEcCCce-EEEEEeecC
Confidence 34567999999999999999999 999998754
No 284
>KOG0882|consensus
Probab=94.26 E-value=0.026 Score=38.50 Aligned_cols=44 Identities=14% Similarity=0.188 Sum_probs=37.9
Q ss_pred cCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 25 NAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 25 ~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
...++...++.|+|+|..+++-..|.. ||+++.++|+.++++..
T Consensus 198 ~K~Kt~pts~Efsp~g~qistl~~Drk-VR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 198 PKAKTEPTSFEFSPDGAQISTLNPDRK-VRGFVFKTGKLVQEIDE 241 (558)
T ss_pred cccccCccceEEccccCcccccCcccE-EEEEEeccchhhhhhhc
Confidence 345666789999999999999999999 99999999988877753
No 285
>KOG2314|consensus
Probab=93.97 E-value=0.19 Score=35.32 Aligned_cols=48 Identities=8% Similarity=0.066 Sum_probs=35.6
Q ss_pred eEEEcccCCcCCCCCcEEecC--CccCEE-EEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 6 CSQDLSSTELSSSSSPVTINA--HQSELA-CLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 6 ~i~d~~~~~~~~~~~~~~~~~--h~~~i~-~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
||||++++. ..+.|.. ....++ -+.||.|++++|-...+ + |.||+..+
T Consensus 285 ~IWDI~tG~-----lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-s-isIyEtps 335 (698)
T KOG2314|consen 285 IIWDIATGL-----LKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-S-ISIYETPS 335 (698)
T ss_pred EEEEccccc-----hhcceeccCCCccccceEEeccCCceeEEeccc-e-EEEEecCc
Confidence 499999987 6666655 333444 46999999999987765 4 89998765
No 286
>KOG0309|consensus
Probab=93.90 E-value=0.18 Score=36.69 Aligned_cols=66 Identities=20% Similarity=0.267 Sum_probs=45.7
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc-EEEEeeCCCCCe
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKV-QLVELRRGSDPA 74 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~-~~~~~~~~~~~~ 74 (78)
|+. .||+++.. .....+..-...-..|+|+...-.+.+.+.... |++||.+.|. ++..+++|-..+
T Consensus 138 ~vh-~wd~rSp~----~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~-i~vwd~r~gs~pl~s~K~~vs~v 204 (1081)
T KOG0309|consen 138 YVH-AWDMRSPH----RPFYSTSSWRSAASQVKWNYKDPNVLASSHGND-IFVWDLRKGSTPLCSLKGHVSSV 204 (1081)
T ss_pred cce-eeeccCCC----cceeeeecccccCceeeecccCcchhhhccCCc-eEEEeccCCCcceEEecccceee
Confidence 677 89998875 455555544455578999985545555677777 9999999764 667777655444
No 287
>KOG0309|consensus
Probab=93.75 E-value=0.037 Score=40.02 Aligned_cols=49 Identities=24% Similarity=0.432 Sum_probs=42.5
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCC-CCEEEEEcCCCCEEEEeeCCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQT-GTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~ 60 (78)
+||++.++ .....+.+|-..|+++.|+.. -+.+.+++.|++ ++.||...
T Consensus 184 vwd~r~gs----~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~t-vkfw~y~k 233 (1081)
T KOG0309|consen 184 VWDLRKGS----TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGT-VKFWDYSK 233 (1081)
T ss_pred EEeccCCC----cceEEecccceeeehHHHhhhhhhhhcccCCCCc-eeeecccc
Confidence 89999887 588889999999999999873 467889999999 99999764
No 288
>KOG4497|consensus
Probab=93.71 E-value=0.3 Score=32.49 Aligned_cols=65 Identities=11% Similarity=0.211 Sum_probs=44.0
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
+||+++.. ++..-..+.+|....|.|....|+.+..... +..|-..-..++.....+=+...++|
T Consensus 346 ~Wdlq~l~------l~avLiQk~piraf~WdP~~prL~vctg~sr-LY~W~psg~~~V~vP~~GF~i~~l~W 410 (447)
T KOG4497|consen 346 LWDLQNLK------LHAVLIQKHPIRAFEWDPGRPRLVVCTGKSR-LYFWAPSGPRVVGVPKKGFNIQKLQW 410 (447)
T ss_pred EEechhhh------hhhhhhhccceeEEEeCCCCceEEEEcCCce-EEEEcCCCceEEecCCCCceeeeEEe
Confidence 78988764 3333345679999999999999998877766 77887654445444444434444666
No 289
>KOG1409|consensus
Probab=93.70 E-value=0.06 Score=35.68 Aligned_cols=39 Identities=15% Similarity=0.364 Sum_probs=30.8
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.+.+..-...|..+.+..+-..|+|++.|.. |.|||+++
T Consensus 357 LA~phei~tgItamhlqetlglLvTsG~~Rv-i~iwd~~~ 395 (404)
T KOG1409|consen 357 LAIPHEIKTGITAMHLQETLGLLVTSGTDRV-IKIWDVRS 395 (404)
T ss_pred cccccccccceeEEEhhhhccceeecCCceE-EEEEechh
Confidence 4444322446888999988889999999998 99999875
No 290
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.58 E-value=0.53 Score=35.31 Aligned_cols=34 Identities=32% Similarity=0.365 Sum_probs=29.1
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcE
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTLKKVQ 63 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~ 63 (78)
.....++++++|+.+++-+.++. |++||++++..
T Consensus 859 ~~P~GIavd~dG~lyVaDt~Nn~-Irvid~~~~~~ 892 (1057)
T PLN02919 859 SEPAGLALGENGRLFVADTNNSL-IRYLDLNKGEA 892 (1057)
T ss_pred CCceEEEEeCCCCEEEEECCCCE-EEEEECCCCcc
Confidence 35678999999998888888898 99999998764
No 291
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=93.56 E-value=0.3 Score=21.46 Aligned_cols=22 Identities=18% Similarity=0.142 Sum_probs=14.9
Q ss_pred CccCEEEEEECCCCCEEEEEcC
Q psy1940 27 HQSELACLALNQTGTMIATASS 48 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~ 48 (78)
....-...+|||||+.|+-++.
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~ 28 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSN 28 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEE
T ss_pred CCccccCEEEecCCCEEEEEec
Confidence 3445577899999998875543
No 292
>KOG1240|consensus
Probab=93.31 E-value=0.26 Score=37.47 Aligned_cols=58 Identities=12% Similarity=0.217 Sum_probs=43.3
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
.||++..... -....+...+.|++++.+|-++.++.|...|. +.+||++=+..+...+
T Consensus 1177 ~~D~r~~~~~---w~lk~~~~hG~vTSi~idp~~~WlviGts~G~-l~lWDLRF~~~i~sw~ 1234 (1431)
T KOG1240|consen 1177 SWDTRMRHDA---WRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQ-LVLWDLRFRVPILSWE 1234 (1431)
T ss_pred EecchhhhhH---HhhhcCccccceeEEEecCCceEEEEecCCce-EEEEEeecCceeeccc
Confidence 5777765411 11222344578999999999999999999999 9999999777766554
No 293
>KOG1354|consensus
Probab=92.89 E-value=0.34 Score=32.34 Aligned_cols=30 Identities=13% Similarity=0.399 Sum_probs=26.6
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEee
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWD 57 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d 57 (78)
..+-|.+|.|+.+|.+||||..+|. |.+|.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGR-Vv~f~ 53 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGR-VVLFE 53 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCe-EEEee
Confidence 4567889999999999999999999 88884
No 294
>KOG3621|consensus
Probab=92.86 E-value=0.33 Score=34.80 Aligned_cols=34 Identities=15% Similarity=0.327 Sum_probs=29.6
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.|+..|+++.|+++|..+++|...|. |..-.+.+
T Consensus 122 ~~~~rVTal~Ws~~~~k~ysGD~~Gk-v~~~~L~s 155 (726)
T KOG3621|consen 122 SHKCRVTALEWSKNGMKLYSGDSQGK-VVLTELDS 155 (726)
T ss_pred cCCceEEEEEecccccEEeecCCCce-EEEEEech
Confidence 47889999999999999999999998 77766555
No 295
>KOG1916|consensus
Probab=92.77 E-value=0.1 Score=38.67 Aligned_cols=43 Identities=23% Similarity=0.387 Sum_probs=33.5
Q ss_pred EECCCCCEEEEEcCCCCEEEEeeCC-----CCcEEEEeeCCCCCeEEeC
Q psy1940 35 ALNQTGTMIATASSKGTLIRVWDTL-----KKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 35 ~fs~dg~~l~s~~~d~~~i~i~d~~-----~~~~~~~~~~~~~~~~~~w 78 (78)
..||||+.++++..||. ++.|.+. .-+|++..+.|.+.-.+||
T Consensus 242 ~lSpDGtv~a~a~~dG~-v~f~Qiyi~g~~~~rclhewkphd~~p~vC~ 289 (1283)
T KOG1916|consen 242 SLSPDGTVFAWAISDGS-VGFYQIYITGKIVHRCLHEWKPHDKHPRVCW 289 (1283)
T ss_pred eeCCCCcEEEEeecCCc-cceeeeeeeccccHhhhhccCCCCCCCceee
Confidence 47999999999999998 8877543 3457777777776667776
No 296
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=92.74 E-value=1.1 Score=29.21 Aligned_cols=49 Identities=14% Similarity=0.237 Sum_probs=30.8
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc--EE----EEeeCCCCCeEE
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKKV--QL----VELRRGSDPATL 76 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~--~~----~~~~~~~~~~~~ 76 (78)
.....++.|+|||+++++.......|.+|++.... .. ..++.+..|..+
T Consensus 143 ~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~ 197 (345)
T PF10282_consen 143 GPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHL 197 (345)
T ss_dssp STCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEE
T ss_pred cccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEE
Confidence 34578999999999988875544339999887654 21 234455555544
No 297
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=92.69 E-value=0.97 Score=28.56 Aligned_cols=54 Identities=17% Similarity=0.111 Sum_probs=31.9
Q ss_pred EEecCCccCEEEEEECCCCC-EEEEEcCCCCEEEEeeCCCCcEEEEee--CCCCCeEEe
Q psy1940 22 VTINAHQSELACLALNQTGT-MIATASSKGTLIRVWDTLKKVQLVELR--RGSDPATLY 77 (78)
Q Consensus 22 ~~~~~h~~~i~~v~fs~dg~-~l~s~~~d~~~i~i~d~~~~~~~~~~~--~~~~~~~~~ 77 (78)
+.+.+-...++.++|+|+.+ .+++..+.+. |...|. +|+.++.++ +..+++.+.
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~-i~els~-~G~vlr~i~l~g~~D~EgI~ 71 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGE-IYELSL-DGKVLRRIPLDGFGDYEGIT 71 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTE-EEEEET-T--EEEEEE-SS-SSEEEEE
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCE-EEEEcC-CCCEEEEEeCCCCCCceeEE
Confidence 34556666799999999755 5555666666 777786 588887775 345555543
No 298
>KOG1334|consensus
Probab=92.68 E-value=0.074 Score=36.60 Aligned_cols=54 Identities=11% Similarity=0.212 Sum_probs=40.6
Q ss_pred EEecCCcc--CEEEEEE-CCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeEE
Q psy1940 22 VTINAHQS--ELACLAL-NQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATL 76 (78)
Q Consensus 22 ~~~~~h~~--~i~~v~f-s~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~ 76 (78)
+.+.+|.+ .|..+-| -|...++++|+.=|. |.|||-.+++.++.+++....+++
T Consensus 385 ~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGh-IFiW~K~t~eii~~MegDr~VVNC 441 (559)
T KOG1334|consen 385 RVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGH-IFIWDKKTGEIIRFMEGDRHVVNC 441 (559)
T ss_pred hhhcccccccccceeeeccCccceEEecCccce-EEEEecchhHHHHHhhcccceEec
Confidence 33778855 4667765 678889999998899 999999988877777665444443
No 299
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=92.64 E-value=0.35 Score=31.93 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=25.4
Q ss_pred EEEEECCCCCEEEEE----cCC-CCEEEEeeCCCCcEEEE
Q psy1940 32 ACLALNQTGTMIATA----SSK-GTLIRVWDTLKKVQLVE 66 (78)
Q Consensus 32 ~~v~fs~dg~~l~s~----~~d-~~~i~i~d~~~~~~~~~ 66 (78)
...++||||+++|-+ +.| .. ++++|+.+|+.+..
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~-l~v~Dl~tg~~l~d 165 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYT-LRVFDLETGKFLPD 165 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEE-EEEEETTTTEEEEE
T ss_pred eeeeECCCCCEEEEEecCCCCceEE-EEEEECCCCcCcCC
Confidence 367899999988855 222 35 99999999977643
No 300
>PRK02888 nitrous-oxide reductase; Validated
Probab=92.53 E-value=1.3 Score=31.69 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=30.0
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcC-CCCEEEEeeCCCCc
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASS-KGTLIRVWDTLKKV 62 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~-d~~~i~i~d~~~~~ 62 (78)
....+... .....+.+||||+++++++. +.+ +.|.|+.+.+
T Consensus 313 v~~yIPVG-KsPHGV~vSPDGkylyVanklS~t-VSVIDv~k~k 354 (635)
T PRK02888 313 LTRYVPVP-KNPHGVNTSPDGKYFIANGKLSPT-VTVIDVRKLD 354 (635)
T ss_pred eEEEEECC-CCccceEECCCCCEEEEeCCCCCc-EEEEEChhhh
Confidence 45555433 34478999999998887655 667 9999998754
No 301
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=92.51 E-value=0.21 Score=33.01 Aligned_cols=41 Identities=15% Similarity=0.301 Sum_probs=31.5
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC-cEEEEeeCC
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKK-VQLVELRRG 70 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~-~~~~~~~~~ 70 (78)
...|+.+.|++.|+++++-+.- + +.|||++.. .++.+++.|
T Consensus 280 vsSISD~kFs~ngryIlsRdyl-t-vkiwDvnm~k~pikTi~~h 321 (460)
T COG5170 280 VSSISDFKFSDNGRYILSRDYL-T-VKIWDVNMAKNPIKTIPMH 321 (460)
T ss_pred hhhhcceEEcCCCcEEEEeccc-e-EEEEecccccCCceeechH
Confidence 4567889999999999876544 4 999999865 577777654
No 302
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=92.47 E-value=0.79 Score=34.05 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=36.4
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee------CCCCCeEEeC
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR------RGSDPATLYW 78 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~------~~~~~~~~~w 78 (78)
-...|.+++||||+..|+....++. +.+.+ ++-..+.+.+ +..+++++=|
T Consensus 119 vd~GI~a~~WSPD~Ella~vT~~~~-l~~mt-~~fd~i~E~~l~~~~~~~~~~VsVGW 174 (928)
T PF04762_consen 119 VDSGILAASWSPDEELLALVTGEGN-LLLMT-RDFDPISEVPLDSDDFGESKHVSVGW 174 (928)
T ss_pred EcCcEEEEEECCCcCEEEEEeCCCE-EEEEe-ccceEEEEeecCccccCCCceeeecc
Confidence 4668999999999999999999988 77764 4455555544 3345666655
No 303
>KOG1354|consensus
Probab=92.42 E-value=0.25 Score=32.94 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=30.2
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC-CCcEEEEeeCC
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTL-KKVQLVELRRG 70 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~-~~~~~~~~~~~ 70 (78)
-..|+.+.|++.|+++++-+-- + +++||++ ..+++.+++-|
T Consensus 272 IsSISDvKFs~sGryilsRDyl-t-vk~wD~nme~~pv~t~~vh 313 (433)
T KOG1354|consen 272 ISSISDVKFSHSGRYILSRDYL-T-VKLWDLNMEAKPVETYPVH 313 (433)
T ss_pred hhhhhceEEccCCcEEEEeccc-e-eEEEeccccCCcceEEeeh
Confidence 3457789999999999875543 5 9999985 45666666654
No 304
>KOG3617|consensus
Probab=92.37 E-value=0.41 Score=35.59 Aligned_cols=39 Identities=21% Similarity=0.463 Sum_probs=32.9
Q ss_pred CcEEe-cCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 20 SPVTI-NAHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 20 ~~~~~-~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
..++. ..|..+|..+.||++|+.|+|+..-|. +..|...
T Consensus 92 e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~-v~lwr~d 131 (1416)
T KOG3617|consen 92 ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGS-VHLWRYD 131 (1416)
T ss_pred eeeeeccCCCCCceeEEecCCCCeEEEcCCCce-eEEEEee
Confidence 33444 479999999999999999999999998 9999644
No 305
>KOG1275|consensus
Probab=92.29 E-value=0.15 Score=37.61 Aligned_cols=48 Identities=17% Similarity=0.272 Sum_probs=36.2
Q ss_pred CCCcEEecCCccCEEEEEECCCCCEEEEEcC---------CCCEEEEeeCCCCcEEEEee
Q psy1940 18 SSSPVTINAHQSELACLALNQTGTMIATASS---------KGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 18 ~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~---------d~~~i~i~d~~~~~~~~~~~ 68 (78)
.+.+++|.+|++.|+.+ +-.|+.|+|++. |.. ++|||++.-+.+.-+.
T Consensus 207 ~~~iht~~aHs~siSDf--Dv~GNlLitCG~S~R~~~l~~D~F-vkVYDLRmmral~PI~ 263 (1118)
T KOG1275|consen 207 FETIHTFDAHSGSISDF--DVQGNLLITCGYSMRRYNLAMDPF-VKVYDLRMMRALSPIQ 263 (1118)
T ss_pred Cceeeeeeccccceeee--eccCCeEEEeecccccccccccch-hhhhhhhhhhccCCcc
Confidence 35899999999998754 567899999864 456 8999998765544433
No 306
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=92.28 E-value=0.64 Score=31.54 Aligned_cols=47 Identities=15% Similarity=0.229 Sum_probs=37.8
Q ss_pred ecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 24 INAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 24 ~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
|.-..-.+.+|..+|.+++.|+.+.-|. |.++|+.++..++-.++..
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~tDslGR-V~LiD~~~~~vvrmWKGYR 349 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVTDSLGR-VLLIDVARGIVVRMWKGYR 349 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEEcCCCc-EEEEECCCChhhhhhccCc
Confidence 3334445789999999999988888899 9999999998887777653
No 307
>KOG2314|consensus
Probab=92.23 E-value=0.35 Score=34.11 Aligned_cols=39 Identities=10% Similarity=0.201 Sum_probs=30.8
Q ss_pred CEEEEEECCCCCEEEEEc-----------CCCCEEEEeeCCCCcEEEEeeC
Q psy1940 30 ELACLALNQTGTMIATAS-----------SKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~-----------~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
.+.-+.|||..++|+|=+ +... +.|||+++|...+.++.
T Consensus 251 ~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~-l~IWDI~tG~lkrsF~~ 300 (698)
T KOG2314|consen 251 GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQ-LIIWDIATGLLKRSFPV 300 (698)
T ss_pred CceeeecCCccceEEEecCCccccCcccCCCce-EEEEEccccchhcceec
Confidence 456789999999999853 2245 99999999988777764
No 308
>PRK04043 tolB translocation protein TolB; Provisional
Probab=92.08 E-value=2.1 Score=28.91 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=23.7
Q ss_pred CccCEEEEEECCCCCEEEE-EcCC--CCEEEEeeCCCCcE
Q psy1940 27 HQSELACLALNQTGTMIAT-ASSK--GTLIRVWDTLKKVQ 63 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s-~~~d--~~~i~i~d~~~~~~ 63 (78)
..+......|||||+.++. .+.+ .. |.++|+.++..
T Consensus 231 ~~g~~~~~~~SPDG~~la~~~~~~g~~~-Iy~~dl~~g~~ 269 (419)
T PRK04043 231 SQGMLVVSDVSKDGSKLLLTMAPKGQPD-IYLYDTNTKTL 269 (419)
T ss_pred CCCcEEeeEECCCCCEEEEEEccCCCcE-EEEEECCCCcE
Confidence 4445566789999987764 3334 34 66678877754
No 309
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=91.91 E-value=0.91 Score=30.52 Aligned_cols=58 Identities=17% Similarity=0.169 Sum_probs=36.2
Q ss_pred EEEcccCCcCCCC----CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEE
Q psy1940 7 SQDLSSTELSSSS----SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVE 66 (78)
Q Consensus 7 i~d~~~~~~~~~~----~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~ 66 (78)
+-|+.+..+..-+ ....+...+++|.+++.| |-.++|.|.++|+ +.|.|+|.-..++.
T Consensus 61 l~di~~r~~~~~~~gf~P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~-l~viD~RGPavI~~ 122 (395)
T PF08596_consen 61 LTDISDRAPPSLKEGFLPLTLLDAKQGPVTALKNS-DIGFVAIGYESGS-LVVIDLRGPAVIYN 122 (395)
T ss_dssp EEE-GGG--TT-SEEEEEEEEE---S-SEEEEEE--BTSEEEEEETTSE-EEEEETTTTEEEEE
T ss_pred eEEehhhCCcccccccCchhheeccCCcEeEEecC-CCcEEEEEecCCc-EEEEECCCCeEEee
Confidence 5566665422111 233345668999999998 5559999999999 99999986666655
No 310
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=91.72 E-value=1.1 Score=23.78 Aligned_cols=31 Identities=23% Similarity=0.176 Sum_probs=22.7
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
..-+.|.++|++++|..++.-+..|.+|...
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 3447899999999888776554338888654
No 311
>KOG2066|consensus
Probab=91.60 E-value=0.91 Score=33.17 Aligned_cols=45 Identities=22% Similarity=0.440 Sum_probs=36.3
Q ss_pred EecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 23 TINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 23 ~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
.+..-.++|.++.|. |+++|=+..+| |++||+.+++.+..++..+
T Consensus 155 ~l~~~eG~I~~i~W~--g~lIAWand~G--v~vyd~~~~~~l~~i~~p~ 199 (846)
T KOG2066|consen 155 VLSEGEGPIHSIKWR--GNLIAWANDDG--VKVYDTPTRQRLTNIPPPS 199 (846)
T ss_pred eeecCccceEEEEec--CcEEEEecCCC--cEEEeccccceeeccCCCC
Confidence 455568899999997 78899888887 7999999998887776443
No 312
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=91.32 E-value=1.4 Score=30.72 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=31.3
Q ss_pred CCccCEEEEEECCCCCEEEEEc--CCCCEEEEeeCCCCcEEEEee
Q psy1940 26 AHQSELACLALNQTGTMIATAS--SKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~--~d~~~i~i~d~~~~~~~~~~~ 68 (78)
.-.++|...+|+|+++.+++.+ .+.. +.++|++.. ....++
T Consensus 272 ~~~~pVhdf~W~p~S~~F~vi~g~~pa~-~s~~~lr~N-l~~~~P 314 (561)
T COG5354 272 DLKDPVHDFTWEPLSSRFAVISGYMPAS-VSVFDLRGN-LRFYFP 314 (561)
T ss_pred cccccceeeeecccCCceeEEecccccc-eeecccccc-eEEecC
Confidence 4478999999999999888765 6666 899998855 444444
No 313
>KOG4532|consensus
Probab=91.20 E-value=0.44 Score=30.93 Aligned_cols=31 Identities=13% Similarity=0.132 Sum_probs=27.0
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
.=-+.+||.....+|++..||+ +-|||++.-
T Consensus 205 ~gF~~S~s~~~~~FAv~~Qdg~-~~I~DVR~~ 235 (344)
T KOG4532|consen 205 HGFYNSFSENDLQFAVVFQDGT-CAIYDVRNM 235 (344)
T ss_pred CceeeeeccCcceEEEEecCCc-EEEEEeccc
Confidence 3357889998999999999999 999999864
No 314
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=90.72 E-value=1.4 Score=30.19 Aligned_cols=46 Identities=11% Similarity=0.149 Sum_probs=27.9
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
+. +||..+.. .++.+... +|..|.||++|++++-.+.+. +.|.+..
T Consensus 128 i~-~yDw~~~~-----~i~~i~v~--~vk~V~Ws~~g~~val~t~~~--i~il~~~ 173 (443)
T PF04053_consen 128 IC-FYDWETGK-----LIRRIDVS--AVKYVIWSDDGELVALVTKDS--IYILKYN 173 (443)
T ss_dssp EE-EE-TTT-------EEEEESS---E-EEEEE-TTSSEEEEE-S-S--EEEEEE-
T ss_pred EE-EEEhhHcc-----eeeEEecC--CCcEEEEECCCCEEEEEeCCe--EEEEEec
Confidence 44 88887765 77777643 488999999999999988775 5665533
No 315
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=90.65 E-value=0.71 Score=19.27 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=20.0
Q ss_pred EEEEEcCCCCEEEEeeCCCCcEEEEe
Q psy1940 42 MIATASSKGTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 42 ~l~s~~~d~~~i~i~d~~~~~~~~~~ 67 (78)
.++.++.++. +..+|.++|+.+-++
T Consensus 8 ~v~~~~~~g~-l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGT-LYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCE-EEEEEcccCcEEEEc
Confidence 5777888898 999999998876553
No 316
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=90.54 E-value=0.54 Score=29.00 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=25.7
Q ss_pred EEECCCCCEEEEEcCCCCEEEEeeCCCCcEEE
Q psy1940 34 LALNQTGTMIATASSKGTLIRVWDTLKKVQLV 65 (78)
Q Consensus 34 v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~ 65 (78)
+.+...+++|.+...+|. +.+||+.+++.+.
T Consensus 16 ~~l~~~~~~Ll~iT~~G~-l~vWnl~~~k~~~ 46 (219)
T PF07569_consen 16 SFLECNGSYLLAITSSGL-LYVWNLKKGKAVL 46 (219)
T ss_pred EEEEeCCCEEEEEeCCCe-EEEEECCCCeecc
Confidence 335667899999999999 9999999887653
No 317
>KOG1064|consensus
Probab=90.50 E-value=0.082 Score=41.56 Aligned_cols=49 Identities=27% Similarity=0.388 Sum_probs=38.0
Q ss_pred eEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 6 CSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 6 ~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
|+||+++.. ..++++. +. ...++++++..|. ++||++..-..++.++..
T Consensus 2361 ~l~D~rqrq-----l~h~~~~---------~~-~~~~f~~~ss~g~-ikIw~~s~~~ll~~~p~e 2409 (2439)
T KOG1064|consen 2361 CLFDIRQRQ-----LRHTFQA---------LD-TREYFVTGSSEGN-IKIWRLSEFGLLHTFPSE 2409 (2439)
T ss_pred EEeehHHHH-----HHHHhhh---------hh-hhheeeccCcccc-eEEEEccccchhhcCchh
Confidence 489998876 6666654 34 5578999999999 999999877777777653
No 318
>KOG2041|consensus
Probab=89.68 E-value=0.26 Score=35.92 Aligned_cols=41 Identities=22% Similarity=0.409 Sum_probs=36.2
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
-.+++.||...|.-+.|+..-..|-|+..+|. |.+|=+-.|
T Consensus 63 mNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl-IiVWmlykg 103 (1189)
T KOG2041|consen 63 MNQTLEGHNASVMVVTWNENNQKLTTSDTSGL-IIVWMLYKG 103 (1189)
T ss_pred hhhhhccCcceEEEEEeccccccccccCCCce-EEEEeeecc
Confidence 45678899999999999999999999999998 999977655
No 319
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.60 E-value=1.4 Score=28.83 Aligned_cols=51 Identities=18% Similarity=0.129 Sum_probs=37.0
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee--CCCCCeEEe
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR--RGSDPATLY 77 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~--~~~~~~~~~ 77 (78)
+-...++++.|+|+.+.|.+...... -.++=...|..+..++ +-++++.+.
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~-~iVElt~~GdlirtiPL~g~~DpE~Ie 135 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPA-AIVELTKEGDLIRTIPLTGFSDPETIE 135 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCc-eEEEEecCCceEEEecccccCChhHeE
Confidence 33445899999999998888887776 6666556788888876 445665543
No 320
>KOG2066|consensus
Probab=89.59 E-value=2.3 Score=31.27 Aligned_cols=40 Identities=13% Similarity=0.271 Sum_probs=27.9
Q ss_pred EecCCccCEEEEEECC-------------CCCEEEEEcCCCCEEEEeeCCCCcE
Q psy1940 23 TINAHQSELACLALNQ-------------TGTMIATASSKGTLIRVWDTLKKVQ 63 (78)
Q Consensus 23 ~~~~h~~~i~~v~fs~-------------dg~~l~s~~~d~~~i~i~d~~~~~~ 63 (78)
.|..|.+.|+-..+.- +|.+++||+.||. |.|..+-+...
T Consensus 53 ~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGk-v~I~sl~~~~~ 105 (846)
T KOG2066|consen 53 ALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGK-VVIGSLFTDDE 105 (846)
T ss_pred eeccccceEEEEecCCcccccccccccccCCceEEEecCCCc-EEEeeccCCcc
Confidence 3455666665544433 4999999999999 88877665543
No 321
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=89.32 E-value=3.9 Score=28.74 Aligned_cols=51 Identities=16% Similarity=0.169 Sum_probs=37.3
Q ss_pred EEEcccCCcCCCCCcEEe-cCCccCEEEEEECCCCCEEEEEcCCC----CEEEEeeCCCCcEE
Q psy1940 7 SQDLSSTELSSSSSPVTI-NAHQSELACLALNQTGTMIATASSKG----TLIRVWDTLKKVQL 64 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~-~~h~~~i~~v~fs~dg~~l~s~~~d~----~~i~i~d~~~~~~~ 64 (78)
++|+.++ .++.+ +...+.|..+.|+|+++++|-+=.+| . |+++|+..++..
T Consensus 427 vididng------nv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~-Iklydm~~~Kiy 482 (668)
T COG4946 427 VIDIDNG------NVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQS-IKLYDMDGGKIY 482 (668)
T ss_pred EEEecCC------CeeEecccccceeEEEEEcCCceeEEEecCcceeeee-EEEEecCCCeEE
Confidence 4566554 34444 35677899999999999999775554 5 999999877654
No 322
>KOG4499|consensus
Probab=89.05 E-value=4.4 Score=26.08 Aligned_cols=42 Identities=17% Similarity=0.283 Sum_probs=32.8
Q ss_pred EEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 33 CLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
.++..-+|+..++.-..++ |.-.|..+|+.+.++.-....++
T Consensus 216 Gm~ID~eG~L~Va~~ng~~-V~~~dp~tGK~L~eiklPt~qit 257 (310)
T KOG4499|consen 216 GMTIDTEGNLYVATFNGGT-VQKVDPTTGKILLEIKLPTPQIT 257 (310)
T ss_pred cceEccCCcEEEEEecCcE-EEEECCCCCcEEEEEEcCCCceE
Confidence 3455668888888877888 88899999999988876655555
No 323
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=88.72 E-value=3.9 Score=25.03 Aligned_cols=46 Identities=22% Similarity=0.217 Sum_probs=34.3
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC-CCCeEEe
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG-SDPATLY 77 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~-~~~~~~~ 77 (78)
..-.+++..+|+..++.-..+. |.++|.+ |+.+..++-. ..+.+++
T Consensus 185 ~pDG~~vD~~G~l~va~~~~~~-I~~~~p~-G~~~~~i~~p~~~~t~~~ 231 (246)
T PF08450_consen 185 YPDGLAVDSDGNLWVADWGGGR-IVVFDPD-GKLLREIELPVPRPTNCA 231 (246)
T ss_dssp EEEEEEEBTTS-EEEEEETTTE-EEEEETT-SCEEEEEE-SSSSEEEEE
T ss_pred CCCcceEcCCCCEEEEEcCCCE-EEEECCC-ccEEEEEcCCCCCEEEEE
Confidence 4678999999998887777787 9999987 8888877754 4555554
No 324
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=88.15 E-value=1.2 Score=18.37 Aligned_cols=25 Identities=16% Similarity=0.348 Sum_probs=16.5
Q ss_pred EEEEEECCCCCEEEEEcCCCCEEEEe
Q psy1940 31 LACLALNQTGTMIATASSKGTLIRVW 56 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~~d~~~i~i~ 56 (78)
...++.+++|+.+++=+..+. |.+|
T Consensus 4 P~gvav~~~g~i~VaD~~n~r-V~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHR-VQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTE-EEEE
T ss_pred CcEEEEeCCCCEEEEECCCCE-EEEC
Confidence 356788888877666655555 6553
No 325
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=87.95 E-value=2.3 Score=31.29 Aligned_cols=30 Identities=37% Similarity=0.759 Sum_probs=25.1
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEeeC
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~ 58 (78)
......|++=+.+| +||.|+.+|. ||+||-
T Consensus 576 ~~~~Fs~~aTt~~G-~iavgs~~G~-IRLyd~ 605 (794)
T PF08553_consen 576 SKNNFSCFATTEDG-YIAVGSNKGD-IRLYDR 605 (794)
T ss_pred cCCCceEEEecCCc-eEEEEeCCCc-EEeecc
Confidence 45567888888777 6999999999 999993
No 326
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=86.92 E-value=1.3 Score=30.91 Aligned_cols=45 Identities=20% Similarity=0.414 Sum_probs=33.2
Q ss_pred EecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 23 TINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 23 ~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
.+....-++..+.|||.|++|++....+ |.+|+-.+...+..+++
T Consensus 27 ~~~~~~~p~~~~~~SP~G~~l~~~~~~~--V~~~~g~~~~~l~~~~~ 71 (561)
T COG5354 27 RFESENWPVAYVSESPLGTYLFSEHAAG--VECWGGPSKAKLVRFRH 71 (561)
T ss_pred cccccCcchhheeecCcchheehhhccc--eEEccccchhheeeeec
Confidence 3444556788899999999999877666 89998777655555543
No 327
>KOG1272|consensus
Probab=86.76 E-value=0.31 Score=33.57 Aligned_cols=66 Identities=23% Similarity=0.374 Sum_probs=52.1
Q ss_pred eeeeEEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
||. -.|+..+. .+..++...+.+..+.=+|-.-.+-+|...|+ |.+|...+.+.+.++--|..+++
T Consensus 232 ~L~-Y~DVS~Gk-----lVa~~~t~~G~~~vm~qNP~NaVih~GhsnGt-VSlWSP~skePLvKiLcH~g~V~ 297 (545)
T KOG1272|consen 232 FLK-YQDVSTGK-----LVASIRTGAGRTDVMKQNPYNAVIHLGHSNGT-VSLWSPNSKEPLVKILCHRGPVS 297 (545)
T ss_pred ceE-EEeechhh-----hhHHHHccCCccchhhcCCccceEEEcCCCce-EEecCCCCcchHHHHHhcCCCcc
Confidence 344 44776665 77788888888888888998888889999999 99999998888777766666654
No 328
>KOG1912|consensus
Probab=86.41 E-value=0.56 Score=34.43 Aligned_cols=60 Identities=17% Similarity=0.262 Sum_probs=43.6
Q ss_pred eeeEEEcccCCcCCCCCcEEec-CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 4 LQCSQDLSSTELSSSSSPVTIN-AHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~-~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
|+ +-|++++- ++..+.++ ....+|..|.-|..|.+|+..=.|.. +.+||+++..+++.+.
T Consensus 500 l~-vtdLrtGl---sk~fR~l~~~despI~~irvS~~~~yLai~Fr~~p-lEiwd~kt~~~lr~mS 560 (1062)
T KOG1912|consen 500 LV-VTDLRTGL---SKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREP-LEIWDLKTLRMLRLMS 560 (1062)
T ss_pred EE-EEEccccc---ccccccCCCCCcCcceeeeecccCceEEEEecccc-hHHHhhccchHHHHHh
Confidence 45 66777653 12333333 34678999999999999999999999 9999998766554443
No 329
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=86.25 E-value=2.7 Score=27.44 Aligned_cols=50 Identities=12% Similarity=0.126 Sum_probs=33.1
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQL 64 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~ 64 (78)
++|+.+. ....+......+....|||+|+.++-.. ++. +-+.+..++...
T Consensus 27 i~d~~~~------~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~n-ly~~~~~~~~~~ 76 (353)
T PF00930_consen 27 IYDIETG------EITPLTPPPPKLQDAKWSPDGKYIAFVR-DNN-LYLRDLATGQET 76 (353)
T ss_dssp EEETTTT------EEEESS-EETTBSEEEE-SSSTEEEEEE-TTE-EEEESSTTSEEE
T ss_pred EEecCCC------ceEECcCCccccccceeecCCCeeEEEe-cCc-eEEEECCCCCeE
Confidence 5566553 3333333356778899999999999876 456 888888777443
No 330
>KOG2377|consensus
Probab=86.06 E-value=3.8 Score=28.78 Aligned_cols=33 Identities=9% Similarity=0.277 Sum_probs=29.1
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
...++|.+|.||+|.+.||.-..+++ |.+++..
T Consensus 64 ~d~G~I~SIkFSlDnkilAVQR~~~~-v~f~nf~ 96 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNKILAVQRTSKT-VDFCNFI 96 (657)
T ss_pred cCCCceeEEEeccCcceEEEEecCce-EEEEecC
Confidence 45679999999999999999999998 9988763
No 331
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=85.83 E-value=4.1 Score=26.55 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=25.2
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCC-CCEEEEeeCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSK-GTLIRVWDTL 59 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d-~~~i~i~d~~ 59 (78)
..+.+..+-..-|.++|||||+.|+.+... +. |.-++..
T Consensus 154 ~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~-i~r~~~d 193 (307)
T COG3386 154 VVRLLDDDLTIPNGLAFSPDGKTLYVADTPANR-IHRYDLD 193 (307)
T ss_pred EEEeecCcEEecCceEECCCCCEEEEEeCCCCe-EEEEecC
Confidence 334344444444789999999888887665 44 6666554
No 332
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=85.74 E-value=2.1 Score=18.78 Aligned_cols=28 Identities=14% Similarity=0.224 Sum_probs=22.7
Q ss_pred EEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 42 MIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 42 ~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
.+..++.++. +.-.|.++|+.+-.++..
T Consensus 2 ~v~~~~~~g~-l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 2 RVYVGTPDGY-LYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp EEEEETTTSE-EEEEETTTTSEEEEEESS
T ss_pred EEEEeCCCCE-EEEEECCCCCEEEeeeCC
Confidence 3556689998 999999999999877643
No 333
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=85.69 E-value=3.5 Score=24.70 Aligned_cols=30 Identities=20% Similarity=0.202 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
++..+++++.++. +..+|+.+|+.+..+..
T Consensus 35 ~~~~v~~~~~~~~-l~~~d~~tG~~~W~~~~ 64 (238)
T PF13360_consen 35 DGGRVYVASGDGN-LYALDAKTGKVLWRFDL 64 (238)
T ss_dssp ETTEEEEEETTSE-EEEEETTTSEEEEEEEC
T ss_pred eCCEEEEEcCCCE-EEEEECCCCCEEEEeec
Confidence 5667777788888 99999999998876664
No 334
>KOG0882|consensus
Probab=85.59 E-value=0.18 Score=34.62 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=35.6
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcC-CCCEEEEeeCCCCc
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASS-KGTLIRVWDTLKKV 62 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~-d~~~i~i~d~~~~~ 62 (78)
-+..++.|-+.|.+++-+.||..+.|.+. |+. ++++|+.+-.
T Consensus 45 fVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs-~KvfDvEn~D 87 (558)
T KOG0882|consen 45 FVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHS-VKVFDVENFD 87 (558)
T ss_pred ehhhhHHHHHHHHhhhccccceeEeeccCcccc-eeEEEeeccc
Confidence 45667889999999999999999999777 998 9999887643
No 335
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=85.58 E-value=3.9 Score=26.45 Aligned_cols=39 Identities=13% Similarity=0.157 Sum_probs=33.8
Q ss_pred EEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 31 LACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
|++|...++|.+|+|+..-.. |.+.|.++|+.+-.+.+.
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~-i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTST-IYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred eeeeeecCCccEEEEecccCE-EEEEECCCCcEEEEeCCC
Confidence 789999999999999988888 999999999988777543
No 336
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=84.88 E-value=3.3 Score=25.34 Aligned_cols=31 Identities=19% Similarity=0.166 Sum_probs=23.7
Q ss_pred ccCEEEEEECCCCCEEE-EEcCCCCEEEEeeCC
Q psy1940 28 QSELACLALNQTGTMIA-TASSKGTLIRVWDTL 59 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~-s~~~d~~~i~i~d~~ 59 (78)
-...+.|+|+|||+.|+ +-+..+. |..+|+.
T Consensus 133 ~~~pNGi~~s~dg~~lyv~ds~~~~-i~~~~~~ 164 (246)
T PF08450_consen 133 LGFPNGIAFSPDGKTLYVADSFNGR-IWRFDLD 164 (246)
T ss_dssp ESSEEEEEEETTSSEEEEEETTTTE-EEEEEEE
T ss_pred cccccceEECCcchheeecccccce-eEEEecc
Confidence 34568999999999776 5566676 8888875
No 337
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=83.33 E-value=2.9 Score=18.39 Aligned_cols=20 Identities=15% Similarity=0.323 Sum_probs=15.1
Q ss_pred CCEEEEEcCCCCEEEEeeCCC
Q psy1940 40 GTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 40 g~~l~s~~~d~~~i~i~d~~~ 60 (78)
+..++.++.|+. +..+|+++
T Consensus 21 ~g~vyv~~~dg~-l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGN-LYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSE-EEEEETT-
T ss_pred CCEEEEEcCCCE-EEEEeCCC
Confidence 457888899999 99998764
No 338
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=83.33 E-value=4.5 Score=30.67 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=27.6
Q ss_pred EEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEE
Q psy1940 32 ACLALNQTGTMIATASSKGTLIRVWDTLKKVQL 64 (78)
Q Consensus 32 ~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~ 64 (78)
..++++++|+.+++-+.++. |++||..++...
T Consensus 807 ~Gvavd~dG~LYVADs~N~r-IrviD~~tg~v~ 838 (1057)
T PLN02919 807 LGVLCAKDGQIYVADSYNHK-IKKLDPATKRVT 838 (1057)
T ss_pred ceeeEeCCCcEEEEECCCCE-EEEEECCCCeEE
Confidence 58999999998888888888 999999877654
No 339
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.19 E-value=8.9 Score=25.40 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=25.0
Q ss_pred EECCCCCEEEEEcCC-----CCEEEEeeCCCC-cEEEEeeC
Q psy1940 35 ALNQTGTMIATASSK-----GTLIRVWDTLKK-VQLVELRR 69 (78)
Q Consensus 35 ~fs~dg~~l~s~~~d-----~~~i~i~d~~~~-~~~~~~~~ 69 (78)
.|||||.+|++...| |. |-|||.+.+ ..+.+++.
T Consensus 120 vfs~dG~~LYATEndfd~~rGV-iGvYd~r~~fqrvgE~~t 159 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGV-IGVYDAREGFQRVGEFST 159 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCce-EEEEecccccceeccccc
Confidence 699999999986444 56 999998865 34455554
No 340
>KOG2109|consensus
Probab=82.27 E-value=1.5 Score=31.71 Aligned_cols=37 Identities=27% Similarity=0.510 Sum_probs=31.4
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEe
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVW 56 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~ 56 (78)
....|++|+.+|..+.|.+.|..+++++-.|..|.++
T Consensus 307 ~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvf 343 (788)
T KOG2109|consen 307 DIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVF 343 (788)
T ss_pred hhhheeeecCcccccccccCceEEEEEeeccceeeeE
Confidence 6777899999999999999999999999888534444
No 341
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=81.61 E-value=5.4 Score=25.99 Aligned_cols=32 Identities=9% Similarity=0.158 Sum_probs=27.0
Q ss_pred CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
.+..+++++.+|. +.++|..+|+.+..++.+.
T Consensus 319 ~g~~l~~~~~~G~-l~~~d~~tG~~~~~~~~~~ 350 (377)
T TIGR03300 319 VGGYLVVGDFEGY-LHWLSREDGSFVARLKTDG 350 (377)
T ss_pred ECCEEEEEeCCCE-EEEEECCCCCEEEEEEcCC
Confidence 4668899999999 9999999999998887543
No 342
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=80.99 E-value=5.4 Score=23.85 Aligned_cols=28 Identities=18% Similarity=0.163 Sum_probs=20.7
Q ss_pred CCCCCEEEEEcCCCCEEEEeeCCCCcEEE
Q psy1940 37 NQTGTMIATASSKGTLIRVWDTLKKVQLV 65 (78)
Q Consensus 37 s~dg~~l~s~~~d~~~i~i~d~~~~~~~~ 65 (78)
..++..|+.++.++. +..+|+++|+.+-
T Consensus 209 ~~~~~~l~~~~~~~~-l~~~d~~tG~~~W 236 (238)
T PF13360_consen 209 SVDGGTLYVTSSDGR-LYALDLKTGKVVW 236 (238)
T ss_dssp ECCCTEEEEEETTTE-EEEEETTTTEEEE
T ss_pred eeeCCEEEEEeCCCE-EEEEECCCCCEEe
Confidence 456667777777888 8888888887654
No 343
>KOG2114|consensus
Probab=80.83 E-value=7.2 Score=29.11 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=37.5
Q ss_pred eeeeEEEcccCCcCC-CCCc---EEec----CCccCEEEEEECCCCCEEEEEcCCCCEEEEe
Q psy1940 3 YLQCSQDLSSTELSS-SSSP---VTIN----AHQSELACLALNQTGTMIATASSKGTLIRVW 56 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~-~~~~---~~~~----~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~ 56 (78)
+++ +||+....+.. ..+. +.+. ....|+++++.+.+-+.+|.|-.+|. |..+
T Consensus 93 llk-iw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~-V~~~ 152 (933)
T KOG2114|consen 93 LLK-IWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGL-VICY 152 (933)
T ss_pred EEE-EecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcE-EEEE
Confidence 688 99998876443 3344 2221 23456889999999999999988998 7776
No 344
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=80.67 E-value=6.6 Score=28.64 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=29.5
Q ss_pred CCccCEEEEEECCC---CCEEEEEcCCCCEEEEeeCCCC
Q psy1940 26 AHQSELACLALNQT---GTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 26 ~h~~~i~~v~fs~d---g~~l~s~~~d~~~i~i~d~~~~ 61 (78)
.+...|..+.|.|. +.+|+.=..|++ +|+||+...
T Consensus 144 ~~~~~i~qv~WhP~s~~~~~l~vLtsdn~-lR~y~~~~~ 181 (717)
T PF10168_consen 144 NSSLEIKQVRWHPWSESDSHLVVLTSDNT-LRLYDISDP 181 (717)
T ss_pred CCCceEEEEEEcCCCCCCCeEEEEecCCE-EEEEecCCC
Confidence 34567889999996 589999999999 999998754
No 345
>KOG1275|consensus
Probab=80.09 E-value=7.4 Score=29.41 Aligned_cols=39 Identities=15% Similarity=0.417 Sum_probs=31.1
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.+.+..-++.|.+..+|+.|..++.+..+|. |.+|--++
T Consensus 305 ~~~v~p~~s~i~~fDiSsn~~alafgd~~g~-v~~wa~~~ 343 (1118)
T KOG1275|consen 305 VKMVNPNGSGISAFDISSNGDALAFGDHEGH-VNLWADRP 343 (1118)
T ss_pred eeEEccCCCcceeEEecCCCceEEEecccCc-EeeecCCC
Confidence 3444444556899999999999999999999 99996443
No 346
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=79.93 E-value=7.3 Score=27.19 Aligned_cols=31 Identities=16% Similarity=0.408 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
.|..++.++.+|. ++.+|.++|+.+.+++-+
T Consensus 471 ~g~lvf~g~~~G~-l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 471 AGDLVFYGTLEGY-FKAFDAKTGEELWKFKTG 501 (527)
T ss_pred CCcEEEEECCCCe-EEEEECCCCCEeEEEeCC
Confidence 4557777888999 999999999999888754
No 347
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=79.11 E-value=4.8 Score=19.60 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=15.8
Q ss_pred CEEEEEECCCCCEEEEEcC
Q psy1940 30 ELACLALNQTGTMIATASS 48 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~ 48 (78)
..++++..|||+.|+++..
T Consensus 2 ~~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGYV 20 (55)
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 4578999999999998854
No 348
>KOG2114|consensus
Probab=78.30 E-value=22 Score=26.72 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=33.5
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
...++..|..+++|.+|++....+..++.. . +.+||......-..++
T Consensus 206 ~~~~ld~~G~~lnCss~~~~t~qfIca~~e-~-l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 206 SLKVLDNNGISLNCSSFSDGTYQFICAGSE-F-LYFYDSDGRGPCFAFE 252 (933)
T ss_pred ceeeeccCCccceeeecCCCCccEEEecCc-e-EEEEcCCCcceeeeec
Confidence 456688999999999999654436655544 3 8899987655556666
No 349
>KOG4714|consensus
Probab=78.28 E-value=3.7 Score=26.67 Aligned_cols=32 Identities=13% Similarity=0.427 Sum_probs=24.9
Q ss_pred CEEEEEECCC-CCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 30 ELACLALNQT-GTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 30 ~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
.|.+++-.|. ...++.|+.||. +.+||.+...
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~-~~l~d~rn~~ 213 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGI-VGLWDARNVA 213 (319)
T ss_pred cchhhhCCcccccEEEEecCCCe-EEEEEccccc
Confidence 4778877884 456677888898 9999999763
No 350
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=78.24 E-value=9.1 Score=27.61 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=34.6
Q ss_pred eeeEEEcccCCcCCCCCcEEecCCccCEEEEEE--CCCCCEEEEEcCCCCEEEEee
Q psy1940 4 LQCSQDLSSTELSSSSSPVTINAHQSELACLAL--NQTGTMIATASSKGTLIRVWD 57 (78)
Q Consensus 4 ~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~f--s~dg~~l~s~~~d~~~i~i~d 57 (78)
|. |||.+... -....+| ...++|..+.| .|||+.+.+.+..+. |.++-
T Consensus 53 Lt-IWD~~~~~---lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~-v~l~~ 102 (631)
T PF12234_consen 53 LT-IWDTRSGV---LEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHH-VLLYT 102 (631)
T ss_pred EE-EEEcCCcE---EEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcE-EEEEE
Confidence 45 89987653 1122333 45678998877 569999999999999 88873
No 351
>KOG1008|consensus
Probab=78.21 E-value=0.55 Score=33.67 Aligned_cols=38 Identities=16% Similarity=0.315 Sum_probs=29.2
Q ss_pred EecCCccCEEEEEECC-CCCEEEEE----cCCCCEEEEeeCCCC
Q psy1940 23 TINAHQSELACLALNQ-TGTMIATA----SSKGTLIRVWDTLKK 61 (78)
Q Consensus 23 ~~~~h~~~i~~v~fs~-dg~~l~s~----~~d~~~i~i~d~~~~ 61 (78)
+.++|..+.++++|++ |.+.||+| ..|.. +.|||+.++
T Consensus 97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~-~~Iwdi~s~ 139 (783)
T KOG1008|consen 97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSS-LKIWDINSL 139 (783)
T ss_pred ecccccccccccccccccHHHHHhhhhhhcccCC-ccceecccc
Confidence 3457788899999998 66777776 33446 899999877
No 352
>PRK04043 tolB translocation protein TolB; Provisional
Probab=78.10 E-value=19 Score=24.45 Aligned_cols=35 Identities=6% Similarity=-0.145 Sum_probs=24.3
Q ss_pred CEEEEEECCCCCE-EEEEcCC---CCEEEEeeCCCCcEEE
Q psy1940 30 ELACLALNQTGTM-IATASSK---GTLIRVWDTLKKVQLV 65 (78)
Q Consensus 30 ~i~~v~fs~dg~~-l~s~~~d---~~~i~i~d~~~~~~~~ 65 (78)
.+..-.|||||+. ++..+.+ .. |.++|+.+|+...
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~-Iyv~dl~tg~~~~ 227 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPT-LYKYNLYTGKKEK 227 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCE-EEEEECCCCcEEE
Confidence 6778999999985 5543332 44 8888998876433
No 353
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=77.88 E-value=14 Score=24.69 Aligned_cols=51 Identities=14% Similarity=0.182 Sum_probs=32.8
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeC--CCCcEEE--EeeCCCCCeEE
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDT--LKKVQLV--ELRRGSDPATL 76 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~--~~~~~~~--~~~~~~~~~~~ 76 (78)
.+...-+...|+|+|++|+++.+++..|.+|.. .+|+.-. +......|+.+
T Consensus 288 teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv 342 (346)
T COG2706 288 TEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCV 342 (346)
T ss_pred cCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEE
Confidence 344445789999999999999888755888854 4554332 22234455443
No 354
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=77.85 E-value=8.9 Score=24.77 Aligned_cols=50 Identities=8% Similarity=0.177 Sum_probs=31.2
Q ss_pred eEEEcccCCcCCCCCcEEec-CCccCEEEEEECCCCCEEEEEc------CCCCEEEEeeCCCCc
Q psy1940 6 CSQDLSSTELSSSSSPVTIN-AHQSELACLALNQTGTMIATAS------SKGTLIRVWDTLKKV 62 (78)
Q Consensus 6 ~i~d~~~~~~~~~~~~~~~~-~h~~~i~~v~fs~dg~~l~s~~------~d~~~i~i~d~~~~~ 62 (78)
|+||..+. ....+. +=.+.|+.+.|..+.+.+++|. .... +..||..+..
T Consensus 19 C~yd~~~~------qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~-la~yd~~~~~ 75 (281)
T PF12768_consen 19 CLYDTDNS------QWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSN-LATYDFKNQT 75 (281)
T ss_pred EEEECCCC------EeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCcee-EEEEecCCCe
Confidence 57776543 333332 3367899999986666666663 3344 7788877553
No 355
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=77.82 E-value=4.6 Score=27.01 Aligned_cols=32 Identities=16% Similarity=0.432 Sum_probs=27.9
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
....|.+|.|...|.+|++|...|. |.+|.-.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGR-Vvlfer~ 56 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGR-VVLFERE 56 (460)
T ss_pred ccceeeEEEeccccceEeecCCCce-EEEeecc
Confidence 4567899999999999999999999 9888644
No 356
>KOG4640|consensus
Probab=76.50 E-value=8.7 Score=27.70 Aligned_cols=48 Identities=21% Similarity=0.336 Sum_probs=36.2
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee-CCCCCe-EEeC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR-RGSDPA-TLYW 78 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~-~~~~~~-~~~w 78 (78)
..|.-+.|+|.-..+|.+.++|. +.+...+ ...+..++ .+.... ++||
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~ge-lli~R~n-~qRlwtip~p~~~v~~sL~W 70 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGE-LLIHRLN-WQRLWTIPIPGENVTASLCW 70 (665)
T ss_pred cceEEEEEcCccchhheeccCCc-EEEEEec-cceeEeccCCCCccceeeee
Confidence 35677899999999999999998 8888777 55566666 333333 5888
No 357
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.92 E-value=13 Score=24.69 Aligned_cols=36 Identities=14% Similarity=0.044 Sum_probs=27.9
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEE
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATA 46 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~ 46 (78)
+||.+..- ..+..+..|.-.-..+.+.+||+.++.+
T Consensus 144 vYd~r~~f----qrvgE~~t~GiGpHev~lm~DGrtlvva 179 (366)
T COG3490 144 VYDAREGF----QRVGEFSTHGIGPHEVTLMADGRTLVVA 179 (366)
T ss_pred EEeccccc----ceecccccCCcCcceeEEecCCcEEEEe
Confidence 78877543 3566677887777889999999988876
No 358
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=73.77 E-value=17 Score=27.43 Aligned_cols=33 Identities=15% Similarity=0.307 Sum_probs=26.8
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
....|..+.||+|++.||..-.|. |.+|-..+-
T Consensus 303 ~~~~v~~l~Wn~ds~iLAv~~~~~--vqLWt~~NY 335 (928)
T PF04762_consen 303 EEEKVIELAWNSDSEILAVWLEDR--VQLWTRSNY 335 (928)
T ss_pred CCceeeEEEECCCCCEEEEEecCC--ceEEEeeCC
Confidence 456789999999999999977554 899977664
No 359
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=73.58 E-value=11 Score=25.12 Aligned_cols=33 Identities=9% Similarity=0.078 Sum_probs=25.6
Q ss_pred EEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcE
Q psy1940 31 LACLALNQTGTMIATASSKGTLIRVWDTLKKVQ 63 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~ 63 (78)
+.+..|+|++++|++.+..-.-|.+|++..|..
T Consensus 147 ~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L 179 (346)
T COG2706 147 VHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKL 179 (346)
T ss_pred cceeeeCCCCCEEEEeecCCceEEEEEcccCcc
Confidence 889999999999998744321189999987753
No 360
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=72.98 E-value=12 Score=24.36 Aligned_cols=29 Identities=21% Similarity=0.284 Sum_probs=22.6
Q ss_pred EEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 31 LACLALNQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
..+++|.|||+.+++ ...|. |++++ ..+.
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~-i~~~~-~~g~ 32 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGR-IWVVD-KDGS 32 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTE-EEEEE-TTTE
T ss_pred ceEEEEeCCCcEEEE-eCCce-EEEEe-CCCc
Confidence 478999999988776 55898 99998 4444
No 361
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=72.62 E-value=0.73 Score=18.54 Aligned_cols=8 Identities=13% Similarity=0.522 Sum_probs=5.8
Q ss_pred EECCCCCE
Q psy1940 35 ALNQTGTM 42 (78)
Q Consensus 35 ~fs~dg~~ 42 (78)
.|||+|+.
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 48888874
No 362
>KOG2041|consensus
Probab=72.57 E-value=9.1 Score=28.49 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=26.5
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
..+.|++|+....+++.|+.||- +++..+.+
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGl-LKVlKl~t 45 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGL-LKVLKLGT 45 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccce-eEEEEccc
Confidence 45789999999999999999998 98875543
No 363
>KOG4649|consensus
Probab=72.44 E-value=23 Score=23.30 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=29.5
Q ss_pred EEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 33 CLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
.....+++..+..++.|+. ....|.++..++.+.+
T Consensus 98 ~a~~d~~~glIycgshd~~-~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 98 RAQCDFDGGLIYCGSHDGN-FYALDPKTYGCVYKSK 132 (354)
T ss_pred ceEEcCCCceEEEecCCCc-EEEecccccceEEecc
Confidence 3456788999999999999 9999999988887754
No 364
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=70.84 E-value=17 Score=26.27 Aligned_cols=33 Identities=15% Similarity=0.402 Sum_probs=24.1
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCC-CEEEEeeCC
Q psy1940 26 AHQSELACLALNQTGTMIATASSKG-TLIRVWDTL 59 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~-~~i~i~d~~ 59 (78)
..++-|.|..|.+||++|+.+-... . ..+||-.
T Consensus 153 ~~~G~IhCACWT~DG~RLVVAvGSsLH-SyiWd~~ 186 (671)
T PF15390_consen 153 KTSGLIHCACWTKDGQRLVVAVGSSLH-SYIWDSA 186 (671)
T ss_pred cCCceEEEEEecCcCCEEEEEeCCeEE-EEEecCc
Confidence 4567899999999999888764332 3 6678743
No 365
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=69.13 E-value=21 Score=24.77 Aligned_cols=38 Identities=11% Similarity=0.040 Sum_probs=27.4
Q ss_pred EecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 23 TINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 23 ~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
++...-...+.++|-|||+.|++-...|. |++++..++
T Consensus 24 ~va~GL~~Pw~maflPDG~llVtER~~G~-I~~v~~~~~ 61 (454)
T TIGR03606 24 VLLSGLNKPWALLWGPDNQLWVTERATGK-ILRVNPETG 61 (454)
T ss_pred EEECCCCCceEEEEcCCCeEEEEEecCCE-EEEEeCCCC
Confidence 34334445689999999988887665688 888876544
No 366
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=69.08 E-value=32 Score=23.08 Aligned_cols=59 Identities=15% Similarity=0.151 Sum_probs=37.3
Q ss_pred eeeeEEEcccCCcCCCCCcE--Eec-CCc----cCEEEEEECCCCCEEEEE--cCCCCEEEEeeCCCCcEEEEee
Q psy1940 3 YLQCSQDLSSTELSSSSSPV--TIN-AHQ----SELACLALNQTGTMIATA--SSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~--~~~-~h~----~~i~~v~fs~dg~~l~s~--~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
++. +||..+.. ... .++ .|. ...+..++|.||++++.. +--.+ |.|-|+..++.+.+++
T Consensus 68 vv~-~~D~~TL~-----~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~S-VtVVDl~~~kvv~ei~ 135 (342)
T PF06433_consen 68 VVE-IWDTQTLS-----PTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATS-VTVVDLAAKKVVGEID 135 (342)
T ss_dssp EEE-EEETTTTE-----EEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEE-EEEEETTTTEEEEEEE
T ss_pred EEE-EEecCcCc-----ccceEecCCcchheecccccceEEccCCcEEEEEccCCCCe-EEEEECCCCceeeeec
Confidence 467 89988875 222 122 111 122457899999988864 44455 8899999888777765
No 367
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=68.98 E-value=35 Score=23.53 Aligned_cols=34 Identities=12% Similarity=0.299 Sum_probs=20.5
Q ss_pred EecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeC
Q psy1940 23 TINAHQSELACLALNQTGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 23 ~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~ 58 (78)
.+.........++++|.|++++.++ ||. -.++..
T Consensus 27 ~lg~~~~~p~~ls~npngr~v~V~g-~ge-Y~iyt~ 60 (443)
T PF04053_consen 27 ELGSCEIYPQSLSHNPNGRFVLVCG-DGE-YEIYTA 60 (443)
T ss_dssp EEEE-SS--SEEEE-TTSSEEEEEE-TTE-EEEEET
T ss_pred cCCCCCcCCeeEEECCCCCEEEEEc-CCE-EEEEEc
Confidence 3334444567899999999998855 444 566653
No 368
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=68.85 E-value=8.2 Score=24.20 Aligned_cols=18 Identities=22% Similarity=0.412 Sum_probs=16.4
Q ss_pred CEEEEEECCCCCEEEEEc
Q psy1940 30 ELACLALNQTGTMIATAS 47 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~ 47 (78)
.|.++++||||..++...
T Consensus 113 ~I~~l~vSpDG~RvA~v~ 130 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVV 130 (253)
T ss_pred ceEEEEECCCCcEEEEEE
Confidence 899999999999998766
No 369
>PRK10115 protease 2; Provisional
Probab=68.85 E-value=17 Score=26.27 Aligned_cols=33 Identities=21% Similarity=0.142 Sum_probs=23.5
Q ss_pred CEEEEEECCCCCEEEEEcCC-----CCEEEEeeCCCCcE
Q psy1940 30 ELACLALNQTGTMIATASSK-----GTLIRVWDTLKKVQ 63 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d-----~~~i~i~d~~~~~~ 63 (78)
.+..+.+||||++|+-+... -. +.+-|+.+|..
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~-l~v~d~~tg~~ 165 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYG-IRFRNLETGNW 165 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEE-EEEEECCCCCC
Confidence 35678999999988865322 24 77888887763
No 370
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=68.77 E-value=32 Score=22.92 Aligned_cols=43 Identities=21% Similarity=0.317 Sum_probs=34.0
Q ss_pred CEEEEEECCCCCEEEEEcC---CCCEEEEeeCCCCcEEEEeeCCCCC
Q psy1940 30 ELACLALNQTGTMIATASS---KGTLIRVWDTLKKVQLVELRRGSDP 73 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~---d~~~i~i~d~~~~~~~~~~~~~~~~ 73 (78)
....++++|+++.++.+.. ++. +.+.|..++..+...+.+..|
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~-vsvid~~t~~~~~~~~vG~~P 162 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNT-VSVIDAATNKVTATIPVGNTP 162 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCce-EEEEeCCCCeEEEEEecCCCc
Confidence 3457999999988888766 577 999999999888887765544
No 371
>KOG1832|consensus
Probab=67.90 E-value=1 Score=33.82 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=33.5
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
+||++..+ .++.|......+ .-.|.|.|+.++-- -.|||+++-+.++..+
T Consensus 1251 LWDvR~~~-----aIh~FD~ft~~~-~G~FHP~g~eVIIN------SEIwD~RTF~lLh~VP 1300 (1516)
T KOG1832|consen 1251 LWDVRIPE-----AIHRFDQFTDYG-GGGFHPSGNEVIIN------SEIWDMRTFKLLHSVP 1300 (1516)
T ss_pred eeeeccHH-----HHhhhhhheecc-cccccCCCceEEee------chhhhhHHHHHHhcCc
Confidence 78888876 777776555333 24588988877652 3588888766555544
No 372
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=67.88 E-value=33 Score=22.82 Aligned_cols=43 Identities=19% Similarity=0.253 Sum_probs=29.8
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEc-CCCCEEEEeeCCCCcEE
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATAS-SKGTLIRVWDTLKKVQL 64 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~-~d~~~i~i~d~~~~~~~ 64 (78)
..++......+ ..++++|+|+.++... .++. +.+.|.......
T Consensus 152 ~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~-v~vi~~~~~~v~ 195 (381)
T COG3391 152 VTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNT-VSVIDTSGNSVV 195 (381)
T ss_pred EEEEEecCCCc-ceEEECCCCCeEEEEecCCCe-EEEEeCCCccee
Confidence 45554444445 7899999999777665 5666 999997665554
No 373
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=66.60 E-value=20 Score=24.02 Aligned_cols=31 Identities=26% Similarity=0.527 Sum_probs=25.2
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
+.|.+++..+..+.|++.+.++. |.+||+..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~-Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGS-IQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE--EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCc-EEEEEEeC
Confidence 34899999988899999999999 99999975
No 374
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=65.36 E-value=34 Score=24.90 Aligned_cols=29 Identities=24% Similarity=0.368 Sum_probs=24.7
Q ss_pred EEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 33 CLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
-++|+|.+..++.++....+|.||.+...
T Consensus 343 liAfn~kaq~VAVASNTcn~ilVYSv~~s 371 (671)
T PF15390_consen 343 LIAFNPKAQVVAVASNTCNIILVYSVTPS 371 (671)
T ss_pred eeeeCCcCCEEEEEecCCcEEEEEEeccc
Confidence 47999999999999999877889987653
No 375
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=64.74 E-value=41 Score=22.76 Aligned_cols=29 Identities=21% Similarity=0.445 Sum_probs=22.7
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
+.|-++.|+.+. .|+....||. +++||..
T Consensus 81 ~~iv~~~wt~~e-~LvvV~~dG~-v~vy~~~ 109 (410)
T PF04841_consen 81 GRIVGMGWTDDE-ELVVVQSDGT-VRVYDLF 109 (410)
T ss_pred CCEEEEEECCCC-eEEEEEcCCE-EEEEeCC
Confidence 677788888654 5666788999 9999986
No 376
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=64.11 E-value=31 Score=25.36 Aligned_cols=38 Identities=29% Similarity=0.363 Sum_probs=29.6
Q ss_pred CcEEecC---CccCEEEEEECC-CCCEEEEEcCCCCEEEEeeC
Q psy1940 20 SPVTINA---HQSELACLALNQ-TGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 20 ~~~~~~~---h~~~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~ 58 (78)
.+.++.. ...+...|+|+| +.+.||.....|. -.|||+
T Consensus 134 ~l~~i~~~~tgg~~~aDv~FnP~~~~q~AiVD~~G~-Wsvw~i 175 (765)
T PF10214_consen 134 PLLTISSSDTGGFPHADVAFNPWDQRQFAIVDEKGN-WSVWDI 175 (765)
T ss_pred eeEEechhhcCCCccceEEeccCccceEEEEeccCc-EEEEEe
Confidence 4455542 244667899999 5679999999999 999999
No 377
>PRK13616 lipoprotein LpqB; Provisional
Probab=63.04 E-value=14 Score=26.42 Aligned_cols=26 Identities=19% Similarity=0.294 Sum_probs=20.6
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEE
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRV 55 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i 55 (78)
.+.|.++.|||||+.++... ++. +.+
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~-v~V 472 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGK-VYL 472 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCE-EEE
Confidence 45799999999999998766 355 555
No 378
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=62.84 E-value=41 Score=23.04 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=18.9
Q ss_pred EEEECCCCCEEEEEcC-CCCE-EEEeeCCCCcE
Q psy1940 33 CLALNQTGTMIATASS-KGTL-IRVWDTLKKVQ 63 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~-d~~~-i~i~d~~~~~~ 63 (78)
.=.|+|||+.++-.+. .|.. |-+.|...+..
T Consensus 286 ~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~ 318 (425)
T COG0823 286 SPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV 318 (425)
T ss_pred CccCCCCCCEEEEEeCCCCCcceEEECCCCCce
Confidence 4579999998886543 3330 44556655443
No 379
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=61.87 E-value=38 Score=21.46 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=22.6
Q ss_pred CEEEEEECCC-CCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 30 ELACLALNQT-GTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 30 ~i~~v~fs~d-g~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
-++++++.|. |.+++-+.+... +..+| .+|+.+..+.
T Consensus 172 d~S~l~~~p~t~~lliLS~es~~-l~~~d-~~G~~~~~~~ 209 (248)
T PF06977_consen 172 DLSGLSYDPRTGHLLILSDESRL-LLELD-RQGRVVSSLS 209 (248)
T ss_dssp ---EEEEETTTTEEEEEETTTTE-EEEE--TT--EEEEEE
T ss_pred cccceEEcCCCCeEEEEECCCCe-EEEEC-CCCCEEEEEE
Confidence 4678999885 566666777777 88899 6677665554
No 380
>PRK02888 nitrous-oxide reductase; Validated
Probab=61.31 E-value=47 Score=24.21 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=28.0
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
........+|+. .+|+++|+...|--.|.. |-.||+..
T Consensus 368 vaevevGlGPLH-TaFDg~G~aytslf~dsq-v~kwn~~~ 405 (635)
T PRK02888 368 VAEPELGLGPLH-TAFDGRGNAYTTLFLDSQ-IVKWNIEA 405 (635)
T ss_pred EEeeccCCCcce-EEECCCCCEEEeEeecce-eEEEehHH
Confidence 344444455544 789999998888888888 99999876
No 381
>PF07865 DUF1652: Protein of unknown function (DUF1652); InterPro: IPR012448 The proteins in this entry have not been characterised.
Probab=60.39 E-value=22 Score=18.16 Aligned_cols=17 Identities=12% Similarity=0.233 Sum_probs=13.0
Q ss_pred EEEeeCCCCcEEEEeeC
Q psy1940 53 IRVWDTLKKVQLVELRR 69 (78)
Q Consensus 53 i~i~d~~~~~~~~~~~~ 69 (78)
|+++|..+|.......+
T Consensus 29 vrl~d~~sg~~~l~vtG 45 (69)
T PF07865_consen 29 VRLFDPASGRVELTVTG 45 (69)
T ss_pred EEEecCCCCcEEEEEcC
Confidence 99999999987555543
No 382
>KOG2395|consensus
Probab=60.09 E-value=14 Score=26.35 Aligned_cols=27 Identities=37% Similarity=0.769 Sum_probs=21.9
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEeeC
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~d~ 58 (78)
-.+|++-..+| +++.||.+|. ||+||-
T Consensus 432 nFsc~aTT~sG-~IvvgS~~Gd-IRLYdr 458 (644)
T KOG2395|consen 432 NFSCFATTESG-YIVVGSLKGD-IRLYDR 458 (644)
T ss_pred ccceeeecCCc-eEEEeecCCc-EEeehh
Confidence 44677766666 7999999999 999995
No 383
>KOG3630|consensus
Probab=59.82 E-value=37 Score=26.71 Aligned_cols=31 Identities=10% Similarity=0.177 Sum_probs=25.9
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
.....+++|+|.|+.++.|...|+ +..|-..
T Consensus 198 t~~~Tav~WSprGKQl~iG~nnGt-~vQy~P~ 228 (1405)
T KOG3630|consen 198 TNSQTAVLWSPRGKQLFIGRNNGT-EVQYEPS 228 (1405)
T ss_pred ccceeeEEeccccceeeEecCCCe-EEEeecc
Confidence 345689999999999999999998 8877543
No 384
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=59.36 E-value=39 Score=23.26 Aligned_cols=30 Identities=20% Similarity=0.460 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
.+..++.++.|+. +..+|..+|+.+-..+-
T Consensus 405 ~g~~v~~g~~dG~-l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 405 AGNLVFAGAADGY-FRAFDATTGKELWKFRT 434 (488)
T ss_pred cCCeEEEECCCCe-EEEEECCCCceeeEEEC
Confidence 4567888899999 99999999998877664
No 385
>KOG2444|consensus
Probab=58.13 E-value=23 Score=22.47 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=20.2
Q ss_pred CCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 38 QTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 38 ~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
.++.+..++..|+. ||.|++..++.+-..-+
T Consensus 112 ~~~~~~c~~~~dg~-ir~~n~~p~k~~g~~g~ 142 (238)
T KOG2444|consen 112 RDSSLGCVGAQDGR-IRACNIKPNKVLGYVGQ 142 (238)
T ss_pred cccceeEEeccCCc-eeeeccccCceeeeecc
Confidence 35556777777777 77777777666544433
No 386
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=57.93 E-value=38 Score=22.36 Aligned_cols=29 Identities=7% Similarity=0.081 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 40 GTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 40 g~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+..|+.++.+|. +.+.|..+|+.+...+-
T Consensus 335 ~g~l~v~~~~G~-l~~ld~~tG~~~~~~~~ 363 (394)
T PRK11138 335 NGYLVVGDSEGY-LHWINREDGRFVAQQKV 363 (394)
T ss_pred CCEEEEEeCCCE-EEEEECCCCCEEEEEEc
Confidence 457788899999 99999999998876653
No 387
>KOG3616|consensus
Probab=57.35 E-value=22 Score=27.00 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=26.4
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
-+.+|.=.|.|+.++.+..|++ |++|+..+..
T Consensus 16 ~~~aiqshp~~~s~v~~~~d~s-i~lfn~~~r~ 47 (1636)
T KOG3616|consen 16 FTTAIQSHPGGQSFVLAHQDGS-IILFNFIPRR 47 (1636)
T ss_pred eeeeeeecCCCceEEEEecCCc-EEEEeecccc
Confidence 4567777799999999999999 9999866544
No 388
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=56.86 E-value=15 Score=15.22 Aligned_cols=24 Identities=29% Similarity=0.595 Sum_probs=18.0
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEe
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVW 56 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~ 56 (78)
.|.+++.++ ++++.+...+. +|+|
T Consensus 3 ~i~aia~g~--~~vavaTS~~~-lRif 26 (27)
T PF12341_consen 3 EIEAIAAGD--SWVAVATSAGY-LRIF 26 (27)
T ss_pred eEEEEEccC--CEEEEEeCCCe-EEec
Confidence 467777664 47888888888 9987
No 389
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=56.81 E-value=51 Score=24.33 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=20.5
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCC
Q psy1940 28 QSELACLALNQTGTMIATASSKGT 51 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~ 51 (78)
.-.|..|.+||+|++|+-.+..+.
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v 107 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGV 107 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcE
Confidence 346889999999999999998874
No 390
>COG5436 Predicted integral membrane protein [Function unknown]
Probab=56.80 E-value=41 Score=20.21 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=23.2
Q ss_pred ceeeeEEEcccCCcCCCCCcEEecCCccCEEEEEE-CCCCCEEEE
Q psy1940 2 LYLQCSQDLSSTELSSSSSPVTINAHQSELACLAL-NQTGTMIAT 45 (78)
Q Consensus 2 ~~~~~i~d~~~~~~~~~~~~~~~~~h~~~i~~v~f-s~dg~~l~s 45 (78)
+|.-|.||+.++- ++.-.....+.+++++ .+.|+-+.|
T Consensus 67 ~~a~C~fdvsegp------vri~a~~nvpyWSvsiyds~~nn~fS 105 (182)
T COG5436 67 LYAFCRFDVSEGP------VRIEAKGNVPYWSVSIYDSNGNNFFS 105 (182)
T ss_pred hhheeEeeccCCc------EEEEecCCCceEEEEEEcCCCCceEE
Confidence 4556888887653 3322223557788766 556776665
No 391
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=55.82 E-value=37 Score=22.26 Aligned_cols=25 Identities=24% Similarity=0.428 Sum_probs=18.1
Q ss_pred EEEEEECCCCCEEEEEcCCCCEEEEe
Q psy1940 31 LACLALNQTGTMIATASSKGTLIRVW 56 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~~d~~~i~i~ 56 (78)
+..=-|+.+|+.+|+....|. +|..
T Consensus 261 ~~G~lf~r~G~LiA~~~QEG~-~r~~ 285 (289)
T COG1946 261 VRGQLFDRDGQLIASVVQEGL-IRYH 285 (289)
T ss_pred eeeEEEcCCCCEEEEEeeeEE-Eecc
Confidence 344457888888888888876 7653
No 392
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=55.38 E-value=51 Score=22.81 Aligned_cols=40 Identities=8% Similarity=0.058 Sum_probs=26.0
Q ss_pred CEEEEEECC-CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 30 ELACLALNQ-TGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 30 ~i~~v~fs~-dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
.++++.+.+ ++..++|+..-.. |...|.++++....+..+
T Consensus 272 H~Nsi~yd~~dd~iivSsR~~s~-V~~Id~~t~~i~Wilg~~ 312 (477)
T PF05935_consen 272 HINSIDYDPSDDSIIVSSRHQSA-VIKIDYRTGKIKWILGPP 312 (477)
T ss_dssp -EEEEEEETTTTEEEEEETTT-E-EEEEE-TTS-EEEEES-S
T ss_pred ccCccEEeCCCCeEEEEcCcceE-EEEEECCCCcEEEEeCCC
Confidence 478999988 5666666555556 888898888887776544
No 393
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=55.24 E-value=80 Score=23.06 Aligned_cols=50 Identities=22% Similarity=0.264 Sum_probs=28.3
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee--CCCCCeEEeC
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR--RGSDPATLYW 78 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~--~~~~~~~~~w 78 (78)
-..+.-+.-|.-++ ++....+++.+.|||.+.+....+-. .+.....+-|
T Consensus 29 i~~~~li~gss~~k-~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDW 80 (631)
T PF12234_consen 29 ISNPSLISGSSIKK-IAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDW 80 (631)
T ss_pred CCCcceEeecccCc-EEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeecee
Confidence 33445566666554 44445555449999999887543332 2333344655
No 394
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=54.98 E-value=30 Score=18.46 Aligned_cols=18 Identities=17% Similarity=0.135 Sum_probs=13.2
Q ss_pred CEEEEEECCCCCEEEEEc
Q psy1940 30 ELACLALNQTGTMIATAS 47 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~ 47 (78)
--+.|++++|+++++.+.
T Consensus 58 fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 58 FPNGVALSPDESFVLVAE 75 (89)
T ss_dssp SEEEEEE-TTSSEEEEEE
T ss_pred ccCeEEEcCCCCEEEEEe
Confidence 458899999999777654
No 395
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=54.97 E-value=40 Score=19.53 Aligned_cols=26 Identities=19% Similarity=0.275 Sum_probs=20.1
Q ss_pred EcCCCCEEEEeeCCCCcEEEEeeCCCC
Q psy1940 46 ASSKGTLIRVWDTLKKVQLVELRRGSD 72 (78)
Q Consensus 46 ~~~d~~~i~i~d~~~~~~~~~~~~~~~ 72 (78)
...||. +.++|..+|+.+..++.+.+
T Consensus 47 d~~~G~-v~V~~~~~G~~va~~~~g~~ 72 (135)
T TIGR03054 47 DRPDGA-VAVVETPDGRLVAILEPGQN 72 (135)
T ss_pred cCCCCe-EEEEECCCCCEEEEecCCCC
Confidence 456777 99999999999888875543
No 396
>KOG2566|consensus
Probab=51.94 E-value=79 Score=22.03 Aligned_cols=50 Identities=20% Similarity=0.320 Sum_probs=30.9
Q ss_pred ccCEEEEEE-CCCCCEEEEE----cCCCCEEEEeeCCCCcEEEEeeCCCCCeEEeC
Q psy1940 28 QSELACLAL-NQTGTMIATA----SSKGTLIRVWDTLKKVQLVELRRGSDPATLYW 78 (78)
Q Consensus 28 ~~~i~~v~f-s~dg~~l~s~----~~d~~~i~i~d~~~~~~~~~~~~~~~~~~~~w 78 (78)
...|...+| +|||+..++- +.+.. ++|-|..++.....--.+....++.|
T Consensus 462 ~~~ve~~aflnpdGskvvVllnk~s~~~~-~~I~D~ss~~~y~~tl~p~si~T~~~ 516 (518)
T KOG2566|consen 462 NLDVEATAFLNPDGSKVVVLLNKNSLDSP-LTIKDPSSGVHYLLTLSPRSIHTLYW 516 (518)
T ss_pred ccccceeEEEcCCCcEEEEEeccCCCCCc-eEEecCCCCceEEEecCCCeEEEEEe
Confidence 556667666 8999987764 44456 88888876543322223345555665
No 397
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=51.80 E-value=48 Score=19.46 Aligned_cols=29 Identities=17% Similarity=0.422 Sum_probs=23.2
Q ss_pred CEEEEEECCCC------CEEEEEcCCCCEEEEeeCC
Q psy1940 30 ELACLALNQTG------TMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 30 ~i~~v~fs~dg------~~l~s~~~d~~~i~i~d~~ 59 (78)
.+.+++|||.| -.|++-..++. +.+|...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~-l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGR-LSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCe-EEEEecC
Confidence 67899999943 37778888898 9999755
No 398
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=50.74 E-value=68 Score=20.89 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=22.3
Q ss_pred CCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 40 GTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 40 g~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+..++.+..++. +..+|.++|+.+.+++.
T Consensus 145 ~~~v~v~~~~g~-l~a~d~~tG~~~W~~~~ 173 (377)
T TIGR03300 145 NGLVVVRTNDGR-LTALDAATGERLWTYSR 173 (377)
T ss_pred CCEEEEECCCCe-EEEEEcCCCceeeEEcc
Confidence 456777788898 99999999987766543
No 399
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=50.49 E-value=24 Score=15.54 Aligned_cols=22 Identities=18% Similarity=0.305 Sum_probs=18.1
Q ss_pred cCEEEEEECCCCCEEEEEcCCC
Q psy1940 29 SELACLALNQTGTMIATASSKG 50 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~ 50 (78)
...+.|++.++|+..++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 3568899999999888887665
No 400
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=49.85 E-value=22 Score=24.33 Aligned_cols=25 Identities=32% Similarity=0.404 Sum_probs=19.8
Q ss_pred CCCCEEEEEcCCCCEEEEeeCCCCcEE
Q psy1940 38 QTGTMIATASSKGTLIRVWDTLKKVQL 64 (78)
Q Consensus 38 ~dg~~l~s~~~d~~~i~i~d~~~~~~~ 64 (78)
+|.+.++.|..+|. +++|.. +|..+
T Consensus 77 ~dw~~I~VG~ssG~-vrfyte-~G~LL 101 (415)
T PF14655_consen 77 PDWTCIAVGTSSGY-VRFYTE-NGVLL 101 (415)
T ss_pred CCcEEEEEEecccE-EEEEec-cchHH
Confidence 45789999999999 999986 45443
No 401
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=49.10 E-value=41 Score=24.31 Aligned_cols=17 Identities=53% Similarity=0.765 Sum_probs=15.2
Q ss_pred CEEEEEcCCCCEEEEeeC
Q psy1940 41 TMIATASSKGTLIRVWDT 58 (78)
Q Consensus 41 ~~l~s~~~d~~~i~i~d~ 58 (78)
.++|+++..|. ||+||-
T Consensus 574 GyIa~as~kGD-irLyDR 590 (776)
T COG5167 574 GYIAAASRKGD-IRLYDR 590 (776)
T ss_pred ceEEEecCCCc-eeeehh
Confidence 48999999999 999983
No 402
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=49.01 E-value=94 Score=23.79 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=26.4
Q ss_pred CcEEe-cCCccCEEEEEECCCCCEEEE-EcCCC---C-EEEEeeCCC
Q psy1940 20 SPVTI-NAHQSELACLALNQTGTMIAT-ASSKG---T-LIRVWDTLK 60 (78)
Q Consensus 20 ~~~~~-~~h~~~i~~v~fs~dg~~l~s-~~~d~---~-~i~i~d~~~ 60 (78)
..+.+ -.+..+|.+=+|||||+.|+- .+..+ . .|-+-|+++
T Consensus 340 n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 340 ASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred CceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 34434 346778888899999999987 34333 2 155556654
No 403
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=49.00 E-value=69 Score=21.14 Aligned_cols=19 Identities=21% Similarity=0.225 Sum_probs=14.5
Q ss_pred cCEEEEEECCCCCEEEEEc
Q psy1940 29 SELACLALNQTGTMIATAS 47 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~ 47 (78)
...+.++|.|||...++-+
T Consensus 124 ~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 124 HSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred ccccCceECCCCCEEEecc
Confidence 3477899999998766554
No 404
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=48.98 E-value=54 Score=22.48 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=14.5
Q ss_pred EEEEECCCCCEEEEEcCC
Q psy1940 32 ACLALNQTGTMIATASSK 49 (78)
Q Consensus 32 ~~v~fs~dg~~l~s~~~d 49 (78)
..|.|+|||+++++.++.
T Consensus 180 ~~l~f~pDG~Lyvs~G~~ 197 (399)
T COG2133 180 GRLVFGPDGKLYVTTGSN 197 (399)
T ss_pred ccEEECCCCcEEEEeCCC
Confidence 479999999888776655
No 405
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=47.18 E-value=24 Score=20.05 Aligned_cols=23 Identities=4% Similarity=0.131 Sum_probs=17.5
Q ss_pred EEEECCCCCEEEEEcCCCCEEEEe
Q psy1940 33 CLALNQTGTMIATASSKGTLIRVW 56 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~~~i~i~ 56 (78)
.=.|||||++|.-...|.. ..-.
T Consensus 72 vHvfSpDG~~lSFTYNDhV-mhe~ 94 (122)
T PF12566_consen 72 VHVFSPDGSWLSFTYNDHV-MHEL 94 (122)
T ss_pred ceEECCCCCEEEEEecchh-hccc
Confidence 3479999999988888875 4433
No 406
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=46.24 E-value=62 Score=20.31 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=27.8
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCC
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSK 49 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d 49 (78)
.|++.+. ......+|..- +.|..+.++..|++|+|-.++
T Consensus 42 v~~l~~~---~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k 80 (215)
T PF14761_consen 42 VYDLEQE---ECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEK 80 (215)
T ss_pred EEEcccC---CCceeEEEcch-hheeEEEeccccceEEEEEee
Confidence 5676622 22466667644 788999999999999996444
No 407
>KOG2280|consensus
Probab=46.00 E-value=51 Score=24.65 Aligned_cols=49 Identities=18% Similarity=0.292 Sum_probs=36.6
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee--CCCCCeEEeC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR--RGSDPATLYW 78 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~--~~~~~~~~~w 78 (78)
+.+..++.||.+++|+--.++|. |.+-++...+.+-++. .+..|.+++|
T Consensus 217 ~~~~ki~VS~n~~~laLyt~~G~-i~~vs~D~~~~lce~~~~~~~~p~qm~W 267 (829)
T KOG2280|consen 217 SSVVKISVSPNRRFLALYTETGK-IWVVSIDLSQILCEFNCTDHDPPKQMAW 267 (829)
T ss_pred ceEEEEEEcCCcceEEEEecCCc-EEEEecchhhhhhccCCCCCCchHhcee
Confidence 45667889999999999999998 8887776665554444 5666666776
No 408
>KOG2727|consensus
Probab=46.00 E-value=21 Score=27.40 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=29.3
Q ss_pred EEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCC
Q psy1940 33 CLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGS 71 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~ 71 (78)
.++.||+|++.|.-..=+. |.+-|+..+..++.++|..
T Consensus 326 ~lslSP~gtlAAVTD~lgR-VlLlDta~~ivvr~wKGYR 363 (1244)
T KOG2727|consen 326 KLSLSPSGTLAAVTDSLGR-VLLLDTAALIVVRLWKGYR 363 (1244)
T ss_pred eeeeCCCccEEEEecccCc-EEEEehhhhhHHHHhcccc
Confidence 5788999998888888888 8888888776666555543
No 409
>PF10008 DUF2251: Uncharacterized protein conserved in bacteria (DUF2251); InterPro: IPR014449 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=45.43 E-value=52 Score=18.02 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=19.4
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.|....-.|.||.||...+- .-+|..=.++|...
T Consensus 52 ~~~~~~~~I~Wsedg~~a~L-~Ingy~hA~FDF~~ 85 (97)
T PF10008_consen 52 KDEPRIVSICWSEDGQKAAL-LINGYPHAVFDFAN 85 (97)
T ss_pred CCCCceEEEEEcccccEEEE-EECCcEEEEEEecc
Confidence 35556678999999875443 22333133566543
No 410
>KOG1983|consensus
Probab=45.43 E-value=41 Score=25.75 Aligned_cols=26 Identities=15% Similarity=0.396 Sum_probs=24.0
Q ss_pred CCCCCEEEEEcCCCCEEEEeeCCCCcE
Q psy1940 37 NQTGTMIATASSKGTLIRVWDTLKKVQ 63 (78)
Q Consensus 37 s~dg~~l~s~~~d~~~i~i~d~~~~~~ 63 (78)
+++|..++++..|+. +..||...+..
T Consensus 243 ~~~~~~~v~~h~Dgs-~~fWd~s~g~~ 268 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGS-YAFWDVSSGKL 268 (993)
T ss_pred ccCCceEEEEEecCC-EEeeecCCCce
Confidence 788999999999999 99999998865
No 411
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=45.29 E-value=21 Score=22.88 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=14.1
Q ss_pred EEEECCCCCEEEEEcCCCCEEEE
Q psy1940 33 CLALNQTGTMIATASSKGTLIRV 55 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~~~i~i 55 (78)
.=-|+++|++++++..++. +|.
T Consensus 263 g~i~~~~G~LvAs~~Qegl-~r~ 284 (286)
T PRK10526 263 GEFYTQDGVLVASTVQEGV-MRN 284 (286)
T ss_pred EEEECCCCCEEEEEEeeEE-EEe
Confidence 3346777777777776665 554
No 412
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=43.65 E-value=92 Score=20.41 Aligned_cols=33 Identities=15% Similarity=0.271 Sum_probs=20.1
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
.-.+.+..+.-++||+++++++.... ..-||..
T Consensus 142 ~~~gs~~~~~r~~dG~~vavs~~G~~-~~s~~~G 174 (302)
T PF14870_consen 142 ETSGSINDITRSSDGRYVAVSSRGNF-YSSWDPG 174 (302)
T ss_dssp S----EEEEEE-TTS-EEEEETTSSE-EEEE-TT
T ss_pred CCcceeEeEEECCCCcEEEEECcccE-EEEecCC
Confidence 44567888889999999988876665 6677644
No 413
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=43.25 E-value=41 Score=18.14 Aligned_cols=17 Identities=12% Similarity=0.169 Sum_probs=13.6
Q ss_pred EEEeeCCCCcEEEEeeC
Q psy1940 53 IRVWDTLKKVQLVELRR 69 (78)
Q Consensus 53 i~i~d~~~~~~~~~~~~ 69 (78)
|.|.|..+|+.++.++.
T Consensus 70 VkViD~~T~eVIRqIP~ 86 (107)
T PF03646_consen 70 VKVIDKETGEVIRQIPP 86 (107)
T ss_dssp EEEEETTT-SEEEEE-H
T ss_pred EEEEECCCCcEEEeCCc
Confidence 89999999999999874
No 414
>KOG2479|consensus
Probab=43.18 E-value=46 Score=23.36 Aligned_cols=26 Identities=12% Similarity=0.318 Sum_probs=21.8
Q ss_pred CCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 37 NQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 37 s~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
-|+|++|..-...+.+||+|++..+.
T Consensus 502 ~~dGKYll~KDPnkpiiRlYsvP~~t 527 (549)
T KOG2479|consen 502 QPDGKYLLVKDPNKPIIRLYSVPPNT 527 (549)
T ss_pred CCCCcEEEEeCCCCceEEEeeCCCCc
Confidence 56999999998888779999988664
No 415
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=42.54 E-value=72 Score=23.47 Aligned_cols=30 Identities=17% Similarity=0.460 Sum_probs=27.9
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeC
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~ 58 (78)
+..|-.|.|.++++.+++..+.|. |.+||.
T Consensus 129 ~~kvv~Ik~~~~~~~I~vvl~nG~-i~~~d~ 158 (670)
T PF10395_consen 129 DDKVVGIKFSSDGKIIYVVLENGS-IQIYDF 158 (670)
T ss_pred ccceEEEEEecCCCEEEEEEcCCc-EEEEec
Confidence 567888999999999999999999 999998
No 416
>KOG1920|consensus
Probab=42.44 E-value=63 Score=25.47 Aligned_cols=29 Identities=7% Similarity=0.172 Sum_probs=23.9
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEE
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRV 55 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i 55 (78)
.-.+.|.+++||||+..++-.+.+++ +.+
T Consensus 107 ~vd~GI~aaswS~Dee~l~liT~~~t-ll~ 135 (1265)
T KOG1920|consen 107 NVDNGISAASWSPDEELLALITGRQT-LLF 135 (1265)
T ss_pred eccCceEEEeecCCCcEEEEEeCCcE-EEE
Confidence 34678999999999999999888876 554
No 417
>KOG2467|consensus
Probab=42.32 E-value=26 Score=24.14 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=19.0
Q ss_pred CCCEEEEEcCCCCEEEEeeCCC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
-|-.|+|++.|.. ..+||+++
T Consensus 340 ~Gy~lvtgGTDnH-lvLvDLr~ 360 (477)
T KOG2467|consen 340 RGYKLVTGGTDNH-LVLVDLRP 360 (477)
T ss_pred cCceEecCCccce-EEEEeccc
Confidence 5788999999999 99999985
No 418
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=42.11 E-value=78 Score=20.10 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=25.4
Q ss_pred EEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 33 CLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
-+-.-|||+.++.+..+. .|||..+...++.++.
T Consensus 174 ~~~llPdG~lFi~an~~s---~i~d~~~n~v~~~lP~ 207 (243)
T PF07250_consen 174 FVHLLPDGNLFIFANRGS---IIYDYKTNTVVRTLPD 207 (243)
T ss_pred eEEEcCCCCEEEEEcCCc---EEEeCCCCeEEeeCCC
Confidence 466689999998887653 5779888877666653
No 419
>PRK08868 flagellar protein FlaG; Provisional
Probab=41.58 E-value=34 Score=20.09 Aligned_cols=18 Identities=0% Similarity=0.213 Sum_probs=15.9
Q ss_pred EEEEeeCCCCcEEEEeeC
Q psy1940 52 LIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 52 ~i~i~d~~~~~~~~~~~~ 69 (78)
+|+|.|..++..++.++.
T Consensus 103 VVkViD~~T~EVIRQIP~ 120 (144)
T PRK08868 103 VVTIYEASTGDIIRQIPD 120 (144)
T ss_pred EEEEEECCCCceeeeCCC
Confidence 399999999999999875
No 420
>KOG4460|consensus
Probab=41.57 E-value=42 Score=24.28 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=26.9
Q ss_pred CEEEEEECCCC---CEEEEEcCCCCEEEEeeCCCCcEEE
Q psy1940 30 ELACLALNQTG---TMIATASSKGTLIRVWDTLKKVQLV 65 (78)
Q Consensus 30 ~i~~v~fs~dg---~~l~s~~~d~~~i~i~d~~~~~~~~ 65 (78)
.+..++|.|+. .+|..-+.|.+ ||+||...-..+.
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnv-iRiy~lS~~tely 204 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNV-IRIYSLSEPTELY 204 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcE-EEEEecCCcchhh
Confidence 45678999964 67888889998 9999987654443
No 421
>KOG1008|consensus
Probab=40.68 E-value=13 Score=27.18 Aligned_cols=51 Identities=6% Similarity=0.093 Sum_probs=35.0
Q ss_pred EEEcccCCcCCCCCcEEecC-CccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 7 SQDLSSTELSSSSSPVTINA-HQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~-h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
|||+.+.-. +++..-.|.+ .....+++.|-.+-+.+.+|..... +.++|++
T Consensus 133 Iwdi~s~lt-vPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~-~~ifdlR 184 (783)
T KOG1008|consen 133 IWDINSLLT-VPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRS-VHIFDLR 184 (783)
T ss_pred ceecccccC-CCccccccccccccCccccccccCcchhhcccccch-hhhhhhh
Confidence 788877621 2223333333 3445568888888889999888888 9999988
No 422
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=40.52 E-value=90 Score=23.49 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=28.2
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~ 58 (78)
.-..|++-..||..|.-+.||+++++-+ +.. +.+.|+
T Consensus 610 AKT~lp~lG~pI~~iDvt~DGkwilaTc-~ty-LlLi~t 646 (794)
T PF08553_consen 610 AKTALPGLGDPIIGIDVTADGKWILATC-KTY-LLLIDT 646 (794)
T ss_pred hhhcCCCCCCCeeEEEecCCCcEEEEee-cce-EEEEEE
Confidence 4445667789999999999999998755 445 777774
No 423
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=40.28 E-value=89 Score=19.26 Aligned_cols=28 Identities=14% Similarity=0.037 Sum_probs=21.7
Q ss_pred CEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 41 TMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 41 ~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
.+|.+... +. |.|+++.+++.++.+...
T Consensus 239 pyli~~~~-~~-iEV~~~~~~~lvQ~i~~~ 266 (275)
T PF00780_consen 239 PYLIAFSS-NS-IEVRSLETGELVQTIPLP 266 (275)
T ss_pred CEEEEECC-CE-EEEEECcCCcEEEEEECC
Confidence 36666555 56 999999999999988853
No 424
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=39.18 E-value=64 Score=17.28 Aligned_cols=13 Identities=15% Similarity=0.532 Sum_probs=6.5
Q ss_pred EECCCCCEEEEEc
Q psy1940 35 ALNQTGTMIATAS 47 (78)
Q Consensus 35 ~fs~dg~~l~s~~ 47 (78)
-|+++|+.++++.
T Consensus 87 l~~~~G~LvAs~~ 99 (104)
T cd03444 87 IFTRDGELVASVA 99 (104)
T ss_pred EECCCCCEEEEEE
Confidence 4455555555544
No 425
>KOG1900|consensus
Probab=38.96 E-value=66 Score=25.51 Aligned_cols=34 Identities=15% Similarity=0.341 Sum_probs=31.1
Q ss_pred CCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 26 AHQSELACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.+..+|..++.......+++-++.++ |++||+..
T Consensus 240 ~~~dpI~qi~ID~SR~IlY~lsek~~-v~~Y~i~~ 273 (1311)
T KOG1900|consen 240 SSKDPIRQITIDNSRNILYVLSEKGT-VSAYDIGG 273 (1311)
T ss_pred CCCCcceeeEeccccceeeeeccCce-EEEEEccC
Confidence 67889999999998999999999999 99999876
No 426
>COG4831 Roadblock/LC7 domain [Function unknown]
Probab=38.70 E-value=38 Score=18.60 Aligned_cols=20 Identities=10% Similarity=0.247 Sum_probs=14.1
Q ss_pred ccCEEEEEECCCCCEEEEEc
Q psy1940 28 QSELACLALNQTGTMIATAS 47 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~ 47 (78)
.+.+-.-.|||||+++.--+
T Consensus 12 ~Gv~AAGefs~DGkLv~Ykg 31 (109)
T COG4831 12 KGVMAAGEFSPDGKLVEYKG 31 (109)
T ss_pred cceeEeceeCCCCceEEeeC
Confidence 34456668999999876543
No 427
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=38.45 E-value=1.2e+02 Score=20.13 Aligned_cols=41 Identities=24% Similarity=0.329 Sum_probs=30.7
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
...|+-=.-+|+.+.+.+.-..+- .++||+. |++++.++.+
T Consensus 55 DPAIwVh~t~P~kS~vItt~Kk~G-l~VYDLs-GkqLqs~~~G 95 (364)
T COG4247 55 DPAIWVHATNPDKSLVITTVKKAG-LRVYDLS-GKQLQSVNPG 95 (364)
T ss_pred CcceEeccCCcCcceEEEeeccCC-eEEEecC-CCeeeecCCC
Confidence 344565566889889999888888 9999985 7777766543
No 428
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=38.19 E-value=98 Score=23.10 Aligned_cols=30 Identities=20% Similarity=0.314 Sum_probs=23.7
Q ss_pred CCCEEEE-EcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 39 TGTMIAT-ASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 39 dg~~l~s-~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
.|..++. ++.|+. ++-+|.++|+.+-+.+-
T Consensus 690 agglvF~~gt~d~~-l~A~D~~tGk~lW~~~l 720 (764)
T TIGR03074 690 AGGLVFIGATQDNY-LRAYDLSTGKELWKARL 720 (764)
T ss_pred cCCEEEEEeCCCCE-EEEEECCCCceeeEeeC
Confidence 4556665 789999 99999999998877653
No 429
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=37.60 E-value=27 Score=17.45 Aligned_cols=21 Identities=24% Similarity=0.188 Sum_probs=17.0
Q ss_pred ECCCCCEEEEEcCCCCEEEEee
Q psy1940 36 LNQTGTMIATASSKGTLIRVWD 57 (78)
Q Consensus 36 fs~dg~~l~s~~~d~~~i~i~d 57 (78)
=||-|..++++++.|- +.|+=
T Consensus 8 ~sPlG~l~l~a~e~gL-~~i~f 28 (77)
T PF02870_consen 8 DSPLGPLLLAASEKGL-CGIDF 28 (77)
T ss_dssp EETTEEEEEEEETTCE-EEEEE
T ss_pred cCCCeEEEEEEECCeE-EEEEE
Confidence 3788999999999987 77753
No 430
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain II found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 2F7L_A 3PDK_B 1KFQ_B 1KFI_A 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B ....
Probab=37.35 E-value=50 Score=17.41 Aligned_cols=19 Identities=11% Similarity=0.274 Sum_probs=13.8
Q ss_pred EEEEECCCCCEEEEEcCCC
Q psy1940 32 ACLALNQTGTMIATASSKG 50 (78)
Q Consensus 32 ~~v~fs~dg~~l~s~~~d~ 50 (78)
..++|.+|+..++...++|
T Consensus 86 ~g~~~DgDaDRl~~vd~~G 104 (104)
T PF02879_consen 86 LGIAFDGDADRLGVVDENG 104 (104)
T ss_dssp EEEEE-TTSSBEEEEETTS
T ss_pred EEEEECCcCceeEEECCCC
Confidence 5788999999888766543
No 431
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=37.05 E-value=46 Score=15.06 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=16.1
Q ss_pred CCEEEEEcCCCCEEEEeeCCCC
Q psy1940 40 GTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 40 g~~l~s~~~d~~~i~i~d~~~~ 61 (78)
|+++..+..++. +.|.|+.+-
T Consensus 11 g~yaYva~~~~G-l~IvDISnP 31 (42)
T PF08309_consen 11 GNYAYVADGNNG-LVIVDISNP 31 (42)
T ss_pred CCEEEEEeCCCC-EEEEECCCC
Confidence 677887777677 899998754
No 432
>KOG4460|consensus
Probab=36.98 E-value=1.4e+02 Score=21.84 Aligned_cols=22 Identities=32% Similarity=0.394 Sum_probs=19.3
Q ss_pred CEEEEEECCCCCEEEEEcCCCC
Q psy1940 30 ELACLALNQTGTMIATASSKGT 51 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~ 51 (78)
+|..|..|+.|+.++-++.+|.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi 126 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGL 126 (741)
T ss_pred EEEEEEecCCCceEEEecCCee
Confidence 5678899999999999999985
No 433
>PRK08452 flagellar protein FlaG; Provisional
Probab=36.76 E-value=47 Score=18.94 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=15.9
Q ss_pred EEEEeeCCCCcEEEEeeC
Q psy1940 52 LIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 52 ~i~i~d~~~~~~~~~~~~ 69 (78)
+|.|.|..+++.++.+|.
T Consensus 85 vVkVvD~~T~eVIRqIP~ 102 (124)
T PRK08452 85 VVSVKEANGGKVIREIPS 102 (124)
T ss_pred EEEEEECCCCceeeeCCC
Confidence 399999999999999875
No 434
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=36.45 E-value=73 Score=20.71 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=25.1
Q ss_pred EEEECCCCCEEEEEcCC------CCEEEEeeCCCCcEEEEe
Q psy1940 33 CLALNQTGTMIATASSK------GTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d------~~~i~i~d~~~~~~~~~~ 67 (78)
+|++.++|.++++...+ .. |..+|.. |..+..+
T Consensus 89 gi~~~~~g~~~is~E~~~~~~~~p~-I~~~~~~-G~~~~~~ 127 (326)
T PF13449_consen 89 GIAVPPDGSFWISSEGGRTGGIPPR-IRRFDLD-GRVIRRF 127 (326)
T ss_pred HeEEecCCCEEEEeCCccCCCCCCE-EEEECCC-CcccceE
Confidence 78887888888887777 77 8888876 7665554
No 435
>PRK07738 flagellar protein FlaG; Provisional
Probab=36.33 E-value=49 Score=18.67 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=15.9
Q ss_pred EEEEeeCCCCcEEEEeeC
Q psy1940 52 LIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 52 ~i~i~d~~~~~~~~~~~~ 69 (78)
+|+|.|..+++.+++++.
T Consensus 78 vVkVvD~~T~EVIRQIPp 95 (117)
T PRK07738 78 YVQVVDERTNEVIREIPP 95 (117)
T ss_pred EEEEEECCCCeeeeeCCC
Confidence 389999999999999875
No 436
>PF08149 BING4CT: BING4CT (NUC141) domain; InterPro: IPR012952 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This C-terminal domain is found in the BING4 family of nucleolar WD40 repeat proteins [].
Probab=35.69 E-value=72 Score=16.84 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=23.2
Q ss_pred CccCEEEEEECCCCCEEEEEcCCCCEEEEe
Q psy1940 27 HQSELACLALNQTGTMIATASSKGTLIRVW 56 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~ 56 (78)
....|.++.|.|-...|..|...|. -.+-
T Consensus 8 ~~~~v~~~~F~PfEDvLgvGh~~G~-sSii 36 (80)
T PF08149_consen 8 PGSPVESLRFCPFEDVLGVGHSKGF-SSII 36 (80)
T ss_pred CCCeeeeeEEechHHeeEeeccCce-eEEe
Confidence 4568999999998889999888886 4443
No 437
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor protein-binding. It contains an N-terminal WW domain followed by two PTB domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=35.63 E-value=93 Score=18.12 Aligned_cols=30 Identities=13% Similarity=0.137 Sum_probs=22.9
Q ss_pred CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+|+-+.--.+++. +++-|..+...+..++-
T Consensus 51 eGk~~~m~L~~g~-lkLiDP~~~s~LhSqPI 80 (138)
T cd01272 51 DGKDLFMDLDEGA-LKLIDPENLTVLHSQPI 80 (138)
T ss_pred CcceeEEEecCCc-eEeeCCCCCceEEeeee
Confidence 6777777788888 88888888776666653
No 438
>PF10636 hemP: Hemin uptake protein hemP; InterPro: IPR019600 This entry represents bacterial proteins that are involved in the uptake of the iron source hemin []. ; PDB: 2JRA_B 2LOJ_A.
Probab=35.47 E-value=39 Score=15.19 Aligned_cols=20 Identities=25% Similarity=0.476 Sum_probs=16.8
Q ss_pred CCccCEEEEEECCCCCEEEE
Q psy1940 26 AHQSELACLALNQTGTMIAT 45 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s 45 (78)
.|.+..+.+.....|+.+.+
T Consensus 18 ~H~g~~Y~LR~Tr~gKLILT 37 (38)
T PF10636_consen 18 EHGGQIYRLRITRQGKLILT 37 (38)
T ss_dssp EETTEEEEEEEETTTEEEEE
T ss_pred EeCCeEEEeeEccCCcEEEc
Confidence 58888999999889988765
No 439
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=34.69 E-value=68 Score=17.17 Aligned_cols=27 Identities=19% Similarity=0.550 Sum_probs=19.2
Q ss_pred EEEECCCCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 33 CLALNQTGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
++..+-.|..||.|+.+|. .+|-+.+.
T Consensus 2 ~v~~~~~g~~lAiGG~~g~--~~Wfvtt~ 28 (86)
T PF11090_consen 2 CVTIEHKGRPLAIGGNNGG--CLWFVTTN 28 (86)
T ss_pred eEEEecCCeEEEEccccCC--eEEEEECc
Confidence 4666778899999998865 46655544
No 440
>PF09142 TruB_C: tRNA Pseudouridine synthase II, C terminal; InterPro: IPR015225 Pseudouridine synthases catalyse the isomerisation of uridine to pseudouridine (Psi) in a variety of RNA molecules, and may function as RNA chaperones. Pseudouridine is the most abundant modified nucleotide found in all cellular RNAs. There are four distinct families of pseudouridine synthases that share no global sequence similarity, but which do share the same fold of their catalytic domain(s) and uracil-binding site and are descended from a common molecular ancestor. The catalytic domain consists of two subdomains, each of which has an alpha+beta structure that has some similarity to the ferredoxin-like fold (note: some pseudouridine synthases contain additional domains). The active site is the most conserved structural region of the superfamily and is located between the two homologous domains. These families are []: Pseudouridine synthase I, TruA. Pseudouridine synthase II, TruB, which contains and additional C-terminal PUA domain. Pseudouridine synthase RsuA (ribosomal small subunit) and RluC/RluD (ribosomal large subunits), both of which contain an additional N-terminal alpha-L RNA-binding motif. Pseudouridine synthase TruD, which has a natural circular permutation in the catalytic domain, as well as an insertion of a family-specific alpha+beta subdomain. TruB is responsible for the pseudouridine residue present in the T loops of virtually all tRNAs. TruB recognises the preformed 3-D structure of the T loop primarily through shape complementarity. It accesses its substrate uridyl residue by flipping out the nucleotide and disrupts the tertiary structure of tRNA []. The C-terminal domain adopts a secondary structure consisting of a four-stranded beta sheet and one alpha helix, similar to that found in PUA domains. It is predominantly involved in RNA-binding, being mostly found in tRNA pseudouridine synthase B (TruB) []. ; GO: 0003723 RNA binding, 0009982 pseudouridine synthase activity, 0001522 pseudouridine synthesis, 0009451 RNA modification; PDB: 1SGV_B.
Probab=33.69 E-value=47 Score=15.99 Aligned_cols=17 Identities=18% Similarity=0.354 Sum_probs=9.6
Q ss_pred EEEECCCCCEEEEEcCC
Q psy1940 33 CLALNQTGTMIATASSK 49 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d 49 (78)
..+|.|||+.++-....
T Consensus 29 ~aa~~pdG~lvAL~~~~ 45 (56)
T PF09142_consen 29 VAAFAPDGRLVALLEER 45 (56)
T ss_dssp EEEE-TTS-EEEEEEEE
T ss_pred EEEECCCCcEEEEEEcc
Confidence 34678888877765433
No 441
>COG4703 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.38 E-value=62 Score=16.65 Aligned_cols=25 Identities=0% Similarity=0.029 Sum_probs=18.4
Q ss_pred CCcEEecCCccCEEEEEECCCCCEE
Q psy1940 19 SSPVTINAHQSELACLALNQTGTMI 43 (78)
Q Consensus 19 ~~~~~~~~h~~~i~~v~fs~dg~~l 43 (78)
+..+.|....-+|..|+|+++...+
T Consensus 22 k~~rnFEr~G~vv~eV~ys~~~e~F 46 (74)
T COG4703 22 KRQRNFERNGEVVCEVKYSEDNETF 46 (74)
T ss_pred hhhhhhhcCCEEEEEEEecCCCceE
Confidence 4555676667788899999987744
No 442
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=31.59 E-value=1.5e+02 Score=19.24 Aligned_cols=53 Identities=11% Similarity=0.041 Sum_probs=29.2
Q ss_pred EEEcccCCcCCCCCcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 7 SQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 7 i~d~~~~~~~~~~~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
+||..+.+ ...+++-. ++=+.++ .||+.|+.+.-... +..+|..+-+....+.
T Consensus 114 ~yd~~tl~-----~~~~~~y~-~EGWGLt--~dg~~Li~SDGS~~-L~~~dP~~f~~~~~i~ 166 (264)
T PF05096_consen 114 VYDPNTLK-----KIGTFPYP-GEGWGLT--SDGKRLIMSDGSSR-LYFLDPETFKEVRTIQ 166 (264)
T ss_dssp EEETTTTE-----EEEEEE-S-SS--EEE--ECSSCEEEE-SSSE-EEEE-TTT-SEEEEEE
T ss_pred EEccccce-----EEEEEecC-CcceEEE--cCCCEEEEECCccc-eEEECCcccceEEEEE
Confidence 56655544 45555422 2335555 46777877776777 8999988766655554
No 443
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=31.30 E-value=76 Score=21.85 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=18.3
Q ss_pred CCCEEEEEcCCCCEEEEeeCCCC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLKK 61 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~~ 61 (78)
+...++.|+..|. +|||+...+
T Consensus 36 ~~d~IivGS~~G~-LrIy~P~~~ 57 (418)
T PF14727_consen 36 GSDKIIVGSYSGI-LRIYDPSGN 57 (418)
T ss_pred CccEEEEeccccE-EEEEccCCC
Confidence 3469999999999 999988653
No 444
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=31.08 E-value=86 Score=17.99 Aligned_cols=21 Identities=14% Similarity=0.343 Sum_probs=14.6
Q ss_pred cCCCCEEEEeeCCCCcEEEEee
Q psy1940 47 SSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 47 ~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
...|. |++.|..++..+..++
T Consensus 48 ~seG~-V~l~D~~t~~~ias~~ 68 (125)
T cd01211 48 NIEGT-VKLIDAQSNKVIASFS 68 (125)
T ss_pred CCCce-EEEEcCCCCcEEEEEE
Confidence 45666 8888888877665554
No 445
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=30.03 E-value=79 Score=19.73 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=5.4
Q ss_pred ECCCCCEEEEEcC
Q psy1940 36 LNQTGTMIATASS 48 (78)
Q Consensus 36 fs~dg~~l~s~~~ 48 (78)
|+.+|..+++...
T Consensus 254 ~d~~G~lvAs~~Q 266 (271)
T TIGR00189 254 FTRDGVLIASTVQ 266 (271)
T ss_pred ECCCCCEEEEEEe
Confidence 3444444444333
No 446
>KOG3617|consensus
Probab=29.52 E-value=23 Score=27.14 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=35.5
Q ss_pred EEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE-EeC
Q psy1940 32 ACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT-LYW 78 (78)
Q Consensus 32 ~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~-~~w 78 (78)
.++.|.|..-.|+.+-+.|. +.+|..++.+.-.....|..++. +.|
T Consensus 63 tSLCWHpe~~vLa~gwe~g~-~~v~~~~~~e~htv~~th~a~i~~l~w 109 (1416)
T KOG3617|consen 63 TSLCWHPEEFVLAQGWEMGV-SDVQKTNTTETHTVVETHPAPIQGLDW 109 (1416)
T ss_pred hhhccChHHHHHhhccccce-eEEEecCCceeeeeccCCCCCceeEEe
Confidence 46889998888888888898 99999888776555566766665 544
No 447
>KOG0183|consensus
Probab=28.66 E-value=37 Score=21.49 Aligned_cols=10 Identities=10% Similarity=0.424 Sum_probs=7.9
Q ss_pred EECCCCCEEE
Q psy1940 35 ALNQTGTMIA 44 (78)
Q Consensus 35 ~fs~dg~~l~ 44 (78)
.|||||.+|=
T Consensus 10 vFSPDGhL~Q 19 (249)
T KOG0183|consen 10 VFSPDGHLFQ 19 (249)
T ss_pred EECCCCCEEe
Confidence 4899998664
No 448
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=27.77 E-value=60 Score=13.51 Aligned_cols=31 Identities=13% Similarity=-0.083 Sum_probs=19.1
Q ss_pred cCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 29 SELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 29 ~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
..++.++|+|.+..|+-+......|...++.
T Consensus 9 ~~~~~la~d~~~~~lYw~D~~~~~I~~~~~~ 39 (43)
T smart00135 9 GHPNGLAVDWIEGRLYWTDWGLDVIEVANLD 39 (43)
T ss_pred CCcCEEEEeecCCEEEEEeCCCCEEEEEeCC
Confidence 3456799999887666544333226666554
No 449
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=27.70 E-value=1.5e+02 Score=22.24 Aligned_cols=29 Identities=24% Similarity=0.391 Sum_probs=24.5
Q ss_pred CCC---EEEEEcCCCCEEEEeeCCCCcEEEEee
Q psy1940 39 TGT---MIATASSKGTLIRVWDTLKKVQLVELR 68 (78)
Q Consensus 39 dg~---~l~s~~~d~~~i~i~d~~~~~~~~~~~ 68 (78)
+|+ .++.++.+|. +.++|.++|+.+...+
T Consensus 455 ~G~~~~~v~~~~K~G~-~~vlDr~tG~~l~~~~ 486 (764)
T TIGR03074 455 DGTTVPALVAPTKQGQ-IYVLDRRTGEPIVPVE 486 (764)
T ss_pred CCcEeeEEEEECCCCE-EEEEECCCCCEEeece
Confidence 564 8899999999 9999999999886554
No 450
>PF15644 Tox-PL: Papain fold toxin 1; PDB: 3B21_A.
Probab=27.66 E-value=1.1e+02 Score=16.66 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=15.9
Q ss_pred CCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 40 GTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 40 g~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
|..+...-.+|. |+++|.++|.
T Consensus 88 gHa~nvv~~~G~-i~~~D~Q~G~ 109 (111)
T PF15644_consen 88 GHAFNVVNQNGK-IVFLDPQSGK 109 (111)
T ss_dssp TTEEEEEEE-SS-EEEEBTTTTB
T ss_pred ceEEEEEeCCCe-EEEEeCCCCC
Confidence 555666677788 9999998875
No 451
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=27.59 E-value=2e+02 Score=19.41 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=26.9
Q ss_pred EEEEECC------CCCEEEEEcCCCCEEEEeeCCCCcEEEEeeC
Q psy1940 32 ACLALNQ------TGTMIATASSKGTLIRVWDTLKKVQLVELRR 69 (78)
Q Consensus 32 ~~v~fs~------dg~~l~s~~~d~~~i~i~d~~~~~~~~~~~~ 69 (78)
+.++.-| .|..|+--=-||+ |..||..+|+.+-.+..
T Consensus 247 WG~a~APa~FG~~sg~lLVGNFGDG~-InaFD~~sG~~~g~L~~ 289 (336)
T TIGR03118 247 WGLAIAPESFGSLSGALLVGNFGDGT-INAYDPQSGAQLGQLLD 289 (336)
T ss_pred ceeeeChhhhCCCCCCeEEeecCCce-eEEecCCCCceeeeecC
Confidence 4565544 4666666566899 99999999988777764
No 452
>PF13983 YsaB: YsaB-like lipoprotein
Probab=27.41 E-value=50 Score=17.00 Aligned_cols=12 Identities=8% Similarity=0.385 Sum_probs=9.3
Q ss_pred EEEECCCCCEEE
Q psy1940 33 CLALNQTGTMIA 44 (78)
Q Consensus 33 ~v~fs~dg~~l~ 44 (78)
-.+|.|||.+|=
T Consensus 62 vCSFD~dGqFLH 73 (77)
T PF13983_consen 62 VCSFDADGQFLH 73 (77)
T ss_pred EEeECCCCcEEE
Confidence 457999998763
No 453
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=27.25 E-value=2e+02 Score=19.39 Aligned_cols=30 Identities=17% Similarity=0.165 Sum_probs=20.9
Q ss_pred CCCEEEEEcCCCCEEEEeeCCCCc--EEEEeeC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLKKV--QLVELRR 69 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~~~--~~~~~~~ 69 (78)
+|+.-++-+..|. +...|..+|+ .+..+++
T Consensus 212 dgrLwvldsgtGe-v~~vD~~~G~~e~Va~vpG 243 (335)
T TIGR03032 212 QGKLWLLNSGRGE-LGYVDPQAGKFQPVAFLPG 243 (335)
T ss_pred CCeEEEEECCCCE-EEEEcCCCCcEEEEEECCC
Confidence 6777777778888 8888887774 4444443
No 454
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=26.96 E-value=1.5e+02 Score=20.13 Aligned_cols=28 Identities=7% Similarity=0.197 Sum_probs=22.1
Q ss_pred CEEEEEECCCCCEEEEEcCCCCEEEEeeC
Q psy1940 30 ELACLALNQTGTMIATASSKGTLIRVWDT 58 (78)
Q Consensus 30 ~i~~v~fs~dg~~l~s~~~d~~~i~i~d~ 58 (78)
.|..++|.++..-|+.+...|. |-+|..
T Consensus 3 ~v~~vs~a~~t~Elav~~~~Ge-Vv~~k~ 30 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGE-VVLFKF 30 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS--EEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCc-EEEEEc
Confidence 4788999999888999999998 887743
No 455
>KOG3611|consensus
Probab=26.56 E-value=1.3e+02 Score=22.42 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=25.4
Q ss_pred cEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEE
Q psy1940 21 PVTINAHQSELACLALNQTGTMIATASSKGTLIRV 55 (78)
Q Consensus 21 ~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i 55 (78)
++.|+ +..+|..+..++....|+.++.++. ++|
T Consensus 457 lqvf~-~~~pI~~m~Ls~~~~~LyVgs~~gV-~qv 489 (737)
T KOG3611|consen 457 LQVFP-DAEPIRSMQLSSKRGSLYVGSRSGV-VQV 489 (737)
T ss_pred EeecC-CCCceeEEEecccCCeEEEEccCcE-EEe
Confidence 33343 3378999999998888999999886 666
No 456
>smart00415 HSF heat shock factor.
Probab=26.55 E-value=78 Score=17.08 Aligned_cols=15 Identities=7% Similarity=0.158 Sum_probs=11.6
Q ss_pred EEEECCCCCEEEEEc
Q psy1940 33 CLALNQTGTMIATAS 47 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~ 47 (78)
.|.|+++|+.+....
T Consensus 21 iI~W~~~G~~f~I~d 35 (105)
T smart00415 21 IISWSPSGKSFVIWD 35 (105)
T ss_pred EEEECCCCCEEEEcC
Confidence 589999998776543
No 457
>KOG4379|consensus
Probab=26.47 E-value=2.1e+02 Score=20.45 Aligned_cols=45 Identities=11% Similarity=0.038 Sum_probs=27.8
Q ss_pred eeeeEEEcccCCcCCCCCcEEe----cCCccCEEEEEECCCCCEEEEEc
Q psy1940 3 YLQCSQDLSSTELSSSSSPVTI----NAHQSELACLALNQTGTMIATAS 47 (78)
Q Consensus 3 ~~~~i~d~~~~~~~~~~~~~~~----~~h~~~i~~v~fs~dg~~l~s~~ 47 (78)
|+-.+|-..+...++......+ -.|++.+.-.+|.||++.|+.+|
T Consensus 213 Y~~l~w~~it~~~~D~~~Y~i~krd~l~gKnv~hy~A~epda~~lvi~S 261 (596)
T KOG4379|consen 213 YMDLTWARITHSTNDEWSYNICKRDELTGKNVVHYCAFEPDAESLVIAS 261 (596)
T ss_pred EEEEEEEEecccCCchhhhhhhhhhhhcCCcceeEEeecCCCceEEEEe
Confidence 5554555555443333322222 25677888889999999888766
No 458
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=26.35 E-value=1.8e+02 Score=20.59 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=16.3
Q ss_pred CCCEEEEEcCCCCEEEEeeCCC
Q psy1940 39 TGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 39 dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
||++|+... ++. +.|+|+.+
T Consensus 21 DG~yIY~v~-~~~-l~Iida~p 40 (521)
T PF09826_consen 21 DGEYIYVVS-GGR-LYIIDAYP 40 (521)
T ss_pred CCCEEEEEe-CCE-EEEEECCC
Confidence 899999988 566 89999853
No 459
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional
Probab=25.78 E-value=1.3e+02 Score=20.41 Aligned_cols=20 Identities=10% Similarity=0.240 Sum_probs=17.6
Q ss_pred EEEEECCCCCEEEEEcCCCC
Q psy1940 32 ACLALNQTGTMIATASSKGT 51 (78)
Q Consensus 32 ~~v~fs~dg~~l~s~~~d~~ 51 (78)
..++|+|||.++....++|.
T Consensus 231 lgia~DgDaDR~~vvd~~G~ 250 (441)
T cd05805 231 FGVIIDPNGERLILVDEAGR 250 (441)
T ss_pred EEEEEcCCCCEEEEECCCCC
Confidence 57899999999999988876
No 460
>PF00843 Arena_nucleocap: Arenavirus nucleocapsid protein; InterPro: IPR000229 Arenaviruses are single stranded RNA viruses. The arenavirus S RNAs that have been characterised include conserved terminal sequences, an ambisense arrangement of the coding regions for the precursor glycoprotein (GPC) and nucleocapsid (N) proteins and an intergenic region capable of forming a base-paired "hairpin" structure. The mature glycoproteins that result are G1 and G2 and the N protein []. This family represents the nucleocapsid protein that encapsulates the viral ssRNA [].; GO: 0019013 viral nucleocapsid; PDB: 3MX5_A 3MX2_C 3MWT_C 3Q7C_A 3MWP_B 3Q7B_A 3T5Q_E 3T5N_A 3R3L_B.
Probab=25.57 E-value=18 Score=25.27 Aligned_cols=18 Identities=33% Similarity=0.693 Sum_probs=10.1
Q ss_pred EcCCCCEEEEeeCCCCcEE
Q psy1940 46 ASSKGTLIRVWDTLKKVQL 64 (78)
Q Consensus 46 ~~~d~~~i~i~d~~~~~~~ 64 (78)
+..+|. |||||+.+...+
T Consensus 148 ~~~~GV-VrvWDvkd~~lL 165 (533)
T PF00843_consen 148 GGRNGV-VRVWDVKDPSLL 165 (533)
T ss_dssp --SSSE-E-SEE-S-GGGG
T ss_pred CCCCCe-EEEEecCCHHHH
Confidence 467887 999999876544
No 461
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=24.76 E-value=2.2e+02 Score=21.15 Aligned_cols=39 Identities=21% Similarity=0.224 Sum_probs=31.1
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCCEEEEeeCCCCcEEEEe
Q psy1940 28 QSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVEL 67 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~~~~~~~~ 67 (78)
.+.|.+|.-..-+..++.+-.||+ |.++|..+-+.+...
T Consensus 259 ~~~V~si~~~~~~~~v~~~~~DGs-I~~~dr~t~~~~~~~ 297 (753)
T PF11635_consen 259 NKRVVSITSPELDIVVAFAFSDGS-IEFRDRNTMKELNET 297 (753)
T ss_pred CCeEEEEEecccCcEEEEEEcCCe-EEEEecCcchhhccc
Confidence 456778887778889999999999 999998876655444
No 462
>PRK10183 hypothetical protein; Provisional
Probab=24.67 E-value=1e+02 Score=15.12 Aligned_cols=20 Identities=25% Similarity=0.350 Sum_probs=15.5
Q ss_pred CCccCEEEEEECCCCCEEEE
Q psy1940 26 AHQSELACLALNQTGTMIAT 45 (78)
Q Consensus 26 ~h~~~i~~v~fs~dg~~l~s 45 (78)
.|.+..+.+.....|+.+.+
T Consensus 36 ~H~G~~Y~LR~Tr~GKLILT 55 (56)
T PRK10183 36 DHDGQEYLLRKTQAGKLLLT 55 (56)
T ss_pred EECCcEEEeEEccCCceEec
Confidence 47788888888888887764
No 463
>PF11010 DUF2848: Protein of unknown function (DUF2848); InterPro: IPR021269 This bacterial family of proteins has no known function.
Probab=24.24 E-value=1.9e+02 Score=17.96 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=24.5
Q ss_pred CcEEec-CCccCEEEEEECCCCCEEEEEcCCCC
Q psy1940 20 SPVTIN-AHQSELACLALNQTGTMIATASSKGT 51 (78)
Q Consensus 20 ~~~~~~-~h~~~i~~v~fs~dg~~l~s~~~d~~ 51 (78)
.+.... .+++++-.+-|..+|..+++.++|++
T Consensus 45 ~i~v~g~~tSGE~E~vli~~~g~~~v~vgSDHT 77 (194)
T PF11010_consen 45 EIEVLGEDTSGEAEPVLIRHGGELYVGVGSDHT 77 (194)
T ss_pred eEEeccCCCCceEEEEEEEECCeEEEEecCCCc
Confidence 344443 45778888888889999999999986
No 464
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=22.79 E-value=1.1e+02 Score=22.37 Aligned_cols=20 Identities=10% Similarity=0.140 Sum_probs=16.4
Q ss_pred CccCEEEEEECCCCCEEEEE
Q psy1940 27 HQSELACLALNQTGTMIATA 46 (78)
Q Consensus 27 h~~~i~~v~fs~dg~~l~s~ 46 (78)
+..++...+|+||++.|..+
T Consensus 552 ~g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 552 IGCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred CcceeecceeCCCCceEEEE
Confidence 45688999999999877765
No 465
>KOG2006|consensus
Probab=22.67 E-value=1.6e+02 Score=22.95 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=22.8
Q ss_pred ecCCccCEEEEEECCCCCEEEEEcCCCC
Q psy1940 24 INAHQSELACLALNQTGTMIATASSKGT 51 (78)
Q Consensus 24 ~~~h~~~i~~v~fs~dg~~l~s~~~d~~ 51 (78)
+....=||.-++..+||++++.++..|.
T Consensus 336 y~ssnwpiry~s~~~dg~~lavAgl~gl 363 (1023)
T KOG2006|consen 336 YTSSNWPIRYVSIDYDGKHLAVAGLHGL 363 (1023)
T ss_pred cccccCceeEEeecCCccEEEEeecccc
Confidence 3344557888999999999999999885
No 466
>PF00447 HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR000232 Heat shock factor (HSF) is a transcriptional activator of heat shock genes []: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs []. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus []. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats []. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear []. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus []. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1FBQ_B 1FYL_B 1FBS_A 1FYM_B 3HTS_B 2HTS_A 3HSF_A 1FBU_B 1FYK_A 2LDU_A ....
Probab=22.65 E-value=75 Score=16.93 Aligned_cols=13 Identities=8% Similarity=0.153 Sum_probs=9.4
Q ss_pred EEEECCCCCEEEE
Q psy1940 33 CLALNQTGTMIAT 45 (78)
Q Consensus 33 ~v~fs~dg~~l~s 45 (78)
.|.|+++|+.++.
T Consensus 18 ~I~W~~~G~~fiI 30 (103)
T PF00447_consen 18 IIRWSPDGDSFII 30 (103)
T ss_dssp TCEECTTSSEEEE
T ss_pred EEEEeCCCCEEEE
Confidence 4789999975543
No 467
>PF13964 Kelch_6: Kelch motif
Probab=22.50 E-value=93 Score=13.86 Aligned_cols=23 Identities=9% Similarity=0.200 Sum_probs=13.6
Q ss_pred CCCEEEEEcCCC------CEEEEeeCCCCc
Q psy1940 39 TGTMIATASSKG------TLIRVWDTLKKV 62 (78)
Q Consensus 39 dg~~l~s~~~d~------~~i~i~d~~~~~ 62 (78)
+++..+.|+.+. . +.+||+.+.+
T Consensus 11 ~~~iyv~GG~~~~~~~~~~-v~~yd~~t~~ 39 (50)
T PF13964_consen 11 GGKIYVFGGYDNSGKYSND-VERYDPETNT 39 (50)
T ss_pred CCEEEEECCCCCCCCcccc-EEEEcCCCCc
Confidence 345555555443 4 7788887653
No 468
>PF13860 FlgD_ig: FlgD Ig-like domain; PDB: 3C12_A 3OSV_A.
Probab=22.38 E-value=1.2e+02 Score=15.32 Aligned_cols=15 Identities=7% Similarity=0.341 Sum_probs=7.2
Q ss_pred EEEeeCCCCcEEEEee
Q psy1940 53 IRVWDTLKKVQLVELR 68 (78)
Q Consensus 53 i~i~d~~~~~~~~~~~ 68 (78)
|.|+|. .|..++++.
T Consensus 29 v~I~d~-~G~~V~t~~ 43 (81)
T PF13860_consen 29 VTIYDS-NGQVVRTIS 43 (81)
T ss_dssp EEEEET-TS-EEEEEE
T ss_pred EEEEcC-CCCEEEEEE
Confidence 556664 355554443
No 469
>KOG0084|consensus
Probab=22.23 E-value=56 Score=20.35 Aligned_cols=12 Identities=33% Similarity=0.318 Sum_probs=9.3
Q ss_pred ceeeeEEEcccCC
Q psy1940 2 LYLQCSQDLSSTE 14 (78)
Q Consensus 2 ~~~~~i~d~~~~~ 14 (78)
++|| |||..-.+
T Consensus 58 iKlQ-IWDTAGQE 69 (205)
T KOG0084|consen 58 IKLQ-IWDTAGQE 69 (205)
T ss_pred EEEE-eeeccccH
Confidence 5799 99987554
No 470
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=22.11 E-value=3e+02 Score=19.51 Aligned_cols=19 Identities=26% Similarity=0.536 Sum_probs=14.2
Q ss_pred ccCEEEEEE-CCCCCEEEEE
Q psy1940 28 QSELACLAL-NQTGTMIATA 46 (78)
Q Consensus 28 ~~~i~~v~f-s~dg~~l~s~ 46 (78)
...|..++| +|||+.++..
T Consensus 438 ~~~l~~vAF~nPDGs~vvVv 457 (496)
T PF02055_consen 438 DSGLEAVAFLNPDGSIVVVV 457 (496)
T ss_dssp TTTEEEEEEEETTSEEEEEE
T ss_pred CCceeEEEEECCCCCEEEEE
Confidence 346888988 6999876654
No 471
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=21.93 E-value=2.3e+02 Score=18.28 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=26.2
Q ss_pred CEEEEEcCCCCEEEEeeCCCCcEEEEeeCCCCCeE
Q psy1940 41 TMIATASSKGTLIRVWDTLKKVQLVELRRGSDPAT 75 (78)
Q Consensus 41 ~~l~s~~~d~~~i~i~d~~~~~~~~~~~~~~~~~~ 75 (78)
+.|+.|.+++. |.|.|.+.-..+.++.-..-|+.
T Consensus 196 scLViGTE~~~-i~iLd~~af~il~~~~lpsvPv~ 229 (257)
T PF14779_consen 196 SCLVIGTESGE-IYILDPQAFTILKQVQLPSVPVF 229 (257)
T ss_pred ceEEEEecCCe-EEEECchhheeEEEEecCCCceE
Confidence 58999999999 99999887677776665555543
No 472
>KOG4305|consensus
Probab=21.88 E-value=1.5e+02 Score=23.16 Aligned_cols=27 Identities=11% Similarity=-0.008 Sum_probs=20.0
Q ss_pred EEEEEcCCCCEEEEeeCCCCcEEEEeeCC
Q psy1940 42 MIATASSKGTLIRVWDTLKKVQLVELRRG 70 (78)
Q Consensus 42 ~l~s~~~d~~~i~i~d~~~~~~~~~~~~~ 70 (78)
++.+ =.|.. |.|||+++++.++.+.++
T Consensus 964 yiia-~~~~f-IeI~~~~t~eli~~i~~~ 990 (1029)
T KOG4305|consen 964 YIIA-FGDNF-IEIRDLETGELIQIILGQ 990 (1029)
T ss_pred eEEE-ecCce-EEEEecccceeeEEeecc
Confidence 4443 34567 999999999988877654
No 473
>COG5169 HSF1 Heat shock transcription factor [Transcription]
Probab=21.64 E-value=92 Score=20.35 Aligned_cols=18 Identities=6% Similarity=0.126 Sum_probs=12.8
Q ss_pred EEEECCCCCEEEEEcCCC
Q psy1940 33 CLALNQTGTMIATASSKG 50 (78)
Q Consensus 33 ~v~fs~dg~~l~s~~~d~ 50 (78)
-|.|+|||+.++.-..+.
T Consensus 29 ~I~Ws~~G~sfvI~~~~~ 46 (282)
T COG5169 29 LIQWSPDGRSFVILDPEE 46 (282)
T ss_pred ceEECCCCCEEEEeCcch
Confidence 488999998766554443
No 474
>COG5497 Predicted secreted protein [Function unknown]
Probab=21.50 E-value=78 Score=20.05 Aligned_cols=16 Identities=25% Similarity=0.351 Sum_probs=13.1
Q ss_pred EEEEEECCCCCEEEEE
Q psy1940 31 LACLALNQTGTMIATA 46 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~ 46 (78)
..-+-|||||++++-+
T Consensus 24 ~~~lGFS~dG~~Faf~ 39 (228)
T COG5497 24 FKNLGFSPDGRYFAFA 39 (228)
T ss_pred eEEeeeccCCCEEeeh
Confidence 4568899999999875
No 475
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). These enzymes play important and diverse roles in carbohydrate metabolism in organisms from bacteria to humans. Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=21.36 E-value=1.5e+02 Score=19.46 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=17.1
Q ss_pred EEEEECCCCCEEEEEcCCCC
Q psy1940 32 ACLALNQTGTMIATASSKGT 51 (78)
Q Consensus 32 ~~v~fs~dg~~l~s~~~d~~ 51 (78)
..++|++||..+....++|.
T Consensus 177 lG~a~DgDgDRl~~vd~~G~ 196 (355)
T cd03084 177 FGVAFDGDADRLIVVDENGG 196 (355)
T ss_pred EEEEEcCCCceeEEECCCCc
Confidence 56899999999998888775
No 476
>PF05907 DUF866: Eukaryotic protein of unknown function (DUF866); InterPro: IPR008584 This family consists of a number of hypothetical eukaryotic proteins of unknown function with an average length of around 165 residues.; PDB: 1ZSO_B.
Probab=21.30 E-value=1.9e+02 Score=17.08 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=14.7
Q ss_pred EEEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 31 LACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 31 i~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
+--+.|+|++.+.+.+.+.|..+.=.|+..
T Consensus 105 ~e~~~f~p~~~~~~~~~esG~~f~~vdL~e 134 (161)
T PF05907_consen 105 LEPVEFSPRGGWVAVSVESGTKFEDVDLSE 134 (161)
T ss_dssp EEEEEE---S-EEEEET-TS-EEEEE--TT
T ss_pred cEeEEEecCCcEEEEEecCCCEEEeccCCC
Confidence 456789999999999887776232345444
No 477
>COG4246 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.21 E-value=1.1e+02 Score=20.18 Aligned_cols=24 Identities=13% Similarity=0.290 Sum_probs=18.2
Q ss_pred ccCEEEEEECCCCCEEEEEcCCCC
Q psy1940 28 QSELACLALNQTGTMIATASSKGT 51 (78)
Q Consensus 28 ~~~i~~v~fs~dg~~l~s~~~d~~ 51 (78)
-+.+++++|-|+|+.+.....+|.
T Consensus 73 fgalSairf~~dG~~fiav~DtG~ 96 (340)
T COG4246 73 FGALSAIRFLPDGSQFIAVTDTGH 96 (340)
T ss_pred ccchheeEeccCCceeEEEeecCc
Confidence 346789999999977777666664
No 478
>PF09309 FCP1_C: FCP1, C-terminal; InterPro: IPR015388 The C-terminal domain of FCP-1 is required for interaction with the carboxy terminal domain of RAP74. Interaction relies extensively on van der Waals contacts between hydrophobic residues situated within alpha-helices in both domains []. ; PDB: 1ONV_B 1J2X_B.
Probab=21.19 E-value=32 Score=22.00 Aligned_cols=16 Identities=13% Similarity=0.293 Sum_probs=0.0
Q ss_pred EEEeeCCCCcEEEEee
Q psy1940 53 IRVWDTLKKVQLVELR 68 (78)
Q Consensus 53 i~i~d~~~~~~~~~~~ 68 (78)
||+||..+|++++.-.
T Consensus 56 vr~YD~~TGKLIRkg~ 71 (263)
T PF09309_consen 56 VRIYDPVTGKLIRKGP 71 (263)
T ss_dssp ----------------
T ss_pred eeeecCcccceeeccC
Confidence 8999999999886544
No 479
>PF14567 SUKH_5: SMI1-KNR4 cell-wall; PDB: 2PAG_A.
Probab=20.96 E-value=1.2e+02 Score=17.46 Aligned_cols=27 Identities=11% Similarity=0.302 Sum_probs=14.2
Q ss_pred EEECCCCCEEEEEcCCCCEEEEeeCCCCc
Q psy1940 34 LALNQTGTMIATASSKGTLIRVWDTLKKV 62 (78)
Q Consensus 34 v~fs~dg~~l~s~~~d~~~i~i~d~~~~~ 62 (78)
|-+..+|.-.+.-..+|. |+.|+. +|.
T Consensus 88 ipice~~~~yYcl~~~g~-V~~W~~-~g~ 114 (132)
T PF14567_consen 88 IPICEDGGDYYCLDQEGE-VVYWSH-NGE 114 (132)
T ss_dssp EEEEEETTEEEEE-TTS--EEEE------
T ss_pred eeEEecCCcEEEEeCCCe-EEEecC-CCC
Confidence 445556666666678898 999987 565
No 480
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=20.69 E-value=1.9e+02 Score=19.97 Aligned_cols=28 Identities=25% Similarity=0.424 Sum_probs=22.4
Q ss_pred EEEEECCCCCEEEEEcCCCCEEEEeeCCC
Q psy1940 32 ACLALNQTGTMIATASSKGTLIRVWDTLK 60 (78)
Q Consensus 32 ~~v~fs~dg~~l~s~~~d~~~i~i~d~~~ 60 (78)
.-++-+|.|+.++.+..++. +.++.++.
T Consensus 47 ~~l~vDP~~R~i~v~a~e~~-~~v~~l~~ 74 (504)
T PF10433_consen 47 QYLAVDPSGRCIAVSAYEGN-FLVYPLNR 74 (504)
T ss_dssp -EEEE-TTSSEEEEEEBTTE-EEEEE-SS
T ss_pred cEEEECCcCCEEEEEecCCe-EEEEEecc
Confidence 45788999999999999998 99998776
No 481
>KOG2280|consensus
Probab=20.65 E-value=2.2e+02 Score=21.58 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=25.6
Q ss_pred CcEEecCCccCEEEEEECCCCCEEEEEcCCCCEEEEeeCC
Q psy1940 20 SPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTL 59 (78)
Q Consensus 20 ~~~~~~~h~~~i~~v~fs~dg~~l~s~~~d~~~i~i~d~~ 59 (78)
....+.-..+++-.+.||.+.. |.....+|. +.+|+.-
T Consensus 75 lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~-v~Vy~~~ 112 (829)
T KOG2280|consen 75 LLGRILWKHGELIGMGWSDDEE-LICVQKDGT-VHVYGLL 112 (829)
T ss_pred chHHHHhcCCCeeeecccCCce-EEEEeccce-EEEeecc
Confidence 3333333334677789997765 556688998 9999864
Done!