Query psy195
Match_columns 691
No_of_seqs 302 out of 3193
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 20:26:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy195.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/195hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00926 2A1704 Peptide:H+ sy 100.0 2.1E-62 4.6E-67 565.1 58.1 623 35-679 1-654 (654)
2 KOG1237|consensus 100.0 7.3E-50 1.6E-54 453.5 33.8 465 17-686 33-570 (571)
3 COG3104 PTR2 Dipeptide/tripept 100.0 1.2E-46 2.6E-51 408.4 34.9 447 12-680 12-491 (498)
4 TIGR00924 yjdL_sub1_fam amino 100.0 2.8E-38 6.2E-43 356.4 45.1 445 14-681 3-473 (475)
5 PRK10207 dipeptide/tripeptide 100.0 4.3E-38 9.3E-43 355.8 45.0 441 15-682 8-482 (489)
6 PRK15462 dipeptide/tripeptide 100.0 5.4E-36 1.2E-40 335.6 43.9 337 18-375 6-366 (493)
7 PRK09584 tppB putative tripept 100.0 1.8E-35 3.9E-40 335.7 44.6 446 12-683 13-486 (500)
8 PF00854 PTR2: POT family; In 100.0 9.2E-28 2E-32 262.6 17.2 280 88-378 1-312 (372)
9 KOG0569|consensus 99.9 5.2E-22 1.1E-26 220.2 21.0 387 60-688 63-466 (485)
10 PRK05122 major facilitator sup 99.9 2.9E-19 6.4E-24 196.4 38.3 177 17-205 11-188 (399)
11 PRK11646 multidrug resistance 99.9 3.3E-19 7.2E-24 197.0 37.0 176 14-211 5-180 (400)
12 KOG0254|consensus 99.9 7.9E-21 1.7E-25 216.7 24.6 279 57-377 89-382 (513)
13 PRK12382 putative transporter; 99.9 1E-18 2.2E-23 191.8 38.0 173 18-202 12-185 (392)
14 PRK10077 xylE D-xylose transpo 99.9 6.3E-19 1.4E-23 198.3 33.5 153 53-210 51-209 (479)
15 PRK03545 putative arabinose tr 99.9 3.4E-18 7.5E-23 187.7 37.5 170 22-211 10-179 (390)
16 PRK10489 enterobactin exporter 99.8 1.7E-18 3.6E-23 191.9 34.2 172 22-211 18-192 (417)
17 PRK15402 multidrug efflux syst 99.8 1.4E-17 3.1E-22 183.7 40.0 173 20-212 9-184 (406)
18 TIGR00887 2A0109 phosphate:H+ 99.8 1.8E-18 4E-23 196.7 33.8 160 53-219 52-230 (502)
19 PRK10054 putative transporter; 99.8 3.3E-18 7.1E-23 188.8 33.7 174 18-211 4-177 (395)
20 PRK10504 putative transporter; 99.8 1.3E-17 2.7E-22 187.7 38.4 180 18-217 7-186 (471)
21 TIGR01299 synapt_SV2 synaptic 99.8 1E-17 2.2E-22 196.7 37.9 157 41-209 186-348 (742)
22 PRK11551 putative 3-hydroxyphe 99.8 3.2E-17 6.9E-22 180.5 38.9 168 22-209 16-183 (406)
23 TIGR00900 2A0121 H+ Antiporter 99.8 1.8E-17 3.8E-22 178.1 35.0 169 26-212 4-175 (365)
24 TIGR00893 2A0114 d-galactonate 99.8 2.1E-17 4.6E-22 178.4 35.8 152 43-213 15-166 (399)
25 TIGR00879 SP MFS transporter, 99.8 7.7E-18 1.7E-22 187.1 33.0 140 54-210 68-211 (481)
26 TIGR00710 efflux_Bcr_CflA drug 99.8 8.3E-17 1.8E-21 174.9 39.1 175 20-214 4-178 (385)
27 PRK10213 nepI ribonucleoside t 99.8 1.1E-16 2.4E-21 176.5 39.7 177 13-209 12-188 (394)
28 cd06174 MFS The Major Facilita 99.8 3E-17 6.4E-22 174.7 33.7 167 25-211 3-169 (352)
29 PRK09874 drug efflux system pr 99.8 4.9E-17 1.1E-21 178.7 36.3 173 19-212 12-189 (408)
30 PRK03633 putative MFS family t 99.8 2.7E-16 5.7E-21 172.3 37.2 153 18-183 3-155 (381)
31 PRK14995 methyl viologen resis 99.8 1.6E-16 3.4E-21 180.6 36.3 173 24-215 9-181 (495)
32 TIGR00711 efflux_EmrB drug res 99.8 6.2E-17 1.3E-21 182.2 32.5 169 25-213 6-174 (485)
33 PRK11195 lysophospholipid tran 99.8 4.2E-16 9.2E-21 171.8 38.4 164 21-208 3-166 (393)
34 PF07690 MFS_1: Major Facilita 99.8 2.2E-17 4.7E-22 176.7 27.1 165 28-211 3-167 (352)
35 TIGR00894 2A0114euk Na(+)-depe 99.8 1.9E-16 4.1E-21 178.1 35.7 147 51-214 70-217 (465)
36 PRK11663 regulatory protein Uh 99.8 3.7E-16 8.1E-21 174.5 36.8 150 39-208 41-190 (434)
37 TIGR00891 2A0112 putative sial 99.8 2.4E-16 5.3E-21 172.1 34.4 172 18-207 9-180 (405)
38 PRK12307 putative sialic acid 99.8 3.3E-16 7.1E-21 173.6 35.5 163 21-203 18-180 (426)
39 TIGR00890 2A0111 Oxalate/Forma 99.8 3.4E-16 7.4E-21 168.6 33.7 151 42-212 23-173 (377)
40 KOG2532|consensus 99.8 9.3E-17 2E-21 179.8 30.1 150 51-216 67-216 (466)
41 PRK03699 putative transporter; 99.8 6.8E-16 1.5E-20 169.9 36.5 175 18-211 4-178 (394)
42 TIGR00897 2A0118 polyol permea 99.8 2.5E-15 5.5E-20 166.0 40.7 155 18-183 10-167 (402)
43 PRK10473 multidrug efflux syst 99.8 3.1E-15 6.7E-20 164.2 41.0 167 25-211 7-173 (392)
44 TIGR00898 2A0119 cation transp 99.8 1.9E-16 4.1E-21 179.8 32.2 142 48-211 115-259 (505)
45 PRK15403 multidrug efflux syst 99.8 2.6E-15 5.7E-20 166.7 40.3 145 48-211 42-186 (413)
46 TIGR00902 2A0127 phenyl propri 99.8 2.1E-15 4.6E-20 165.4 38.5 158 23-204 6-167 (382)
47 PRK10091 MFS transport protein 99.8 8.4E-16 1.8E-20 168.5 35.0 172 20-211 2-173 (382)
48 TIGR00895 2A0115 benzoate tran 99.8 5.9E-16 1.3E-20 168.3 33.5 150 42-210 37-186 (398)
49 PRK09556 uhpT sugar phosphate 99.8 1.3E-16 2.9E-21 179.7 29.3 154 45-212 52-208 (467)
50 PRK11102 bicyclomycin/multidru 99.8 2.4E-15 5.3E-20 163.6 38.2 155 38-212 8-162 (377)
51 TIGR00899 2A0120 sugar efflux 99.8 1.1E-15 2.4E-20 165.7 35.2 167 28-213 4-173 (375)
52 TIGR00892 2A0113 monocarboxyla 99.8 3.6E-16 7.7E-21 175.8 31.8 150 46-215 43-193 (455)
53 PRK09528 lacY galactoside perm 99.8 3E-16 6.6E-21 174.1 30.8 180 20-214 9-189 (420)
54 TIGR00903 2A0129 major facilit 99.8 2.6E-15 5.7E-20 164.3 37.6 155 39-214 9-163 (368)
55 PRK11273 glpT sn-glycerol-3-ph 99.8 1.3E-15 2.8E-20 171.0 35.6 170 24-211 28-203 (452)
56 PRK10642 proline/glycine betai 99.8 1.4E-15 3E-20 172.6 35.0 178 20-206 15-203 (490)
57 TIGR02332 HpaX 4-hydroxyphenyl 99.8 1.8E-15 3.8E-20 168.0 34.8 179 20-212 7-185 (412)
58 PRK15011 sugar efflux transpor 99.8 3.9E-15 8.5E-20 163.9 37.3 174 20-214 14-192 (393)
59 PRK10406 alpha-ketoglutarate t 99.8 6.4E-15 1.4E-19 164.4 39.5 170 30-207 31-210 (432)
60 PLN00028 nitrate transmembrane 99.8 4.8E-15 1E-19 167.7 38.9 178 22-213 37-216 (476)
61 PRK09705 cynX putative cyanate 99.8 3.1E-15 6.7E-20 164.9 35.3 152 36-207 24-175 (393)
62 PRK11652 emrD multidrug resist 99.7 1.8E-14 3.9E-19 158.2 41.0 170 20-209 7-176 (394)
63 COG2814 AraJ Arabinose efflux 99.7 8.1E-15 1.8E-19 158.7 36.1 181 17-217 9-189 (394)
64 TIGR00882 2A0105 oligosacchari 99.7 3.2E-15 6.9E-20 164.6 33.6 177 21-212 2-179 (396)
65 PF00083 Sugar_tr: Sugar (and 99.7 1.1E-21 2.4E-26 219.1 -19.9 160 57-230 46-208 (451)
66 PRK08633 2-acyl-glycerophospho 99.7 4.8E-15 1E-19 184.5 37.1 154 20-183 8-164 (1146)
67 PRK03893 putative sialic acid 99.7 1.6E-14 3.4E-19 163.6 37.4 165 19-203 18-182 (496)
68 PRK11043 putative transporter; 99.7 3.6E-14 7.8E-19 156.2 38.4 160 34-212 16-177 (401)
69 PF05977 MFS_3: Transmembrane 99.7 3.4E-14 7.5E-19 161.6 39.2 177 21-213 10-187 (524)
70 PRK15075 citrate-proton sympor 99.7 2.2E-14 4.8E-19 160.2 35.8 178 17-202 11-198 (434)
71 TIGR00881 2A0104 phosphoglycer 99.7 2.2E-15 4.7E-20 162.4 26.9 150 44-212 17-167 (379)
72 TIGR00712 glpT glycerol-3-phos 99.7 6.7E-15 1.4E-19 164.5 31.5 154 44-212 49-202 (438)
73 PRK11128 putative 3-phenylprop 99.7 2.3E-14 5.1E-19 157.1 35.2 155 30-208 13-171 (382)
74 PRK09952 shikimate transporter 99.7 2.6E-14 5.5E-19 160.0 35.4 179 19-205 20-209 (438)
75 TIGR00886 2A0108 nitrite extru 99.7 4.5E-15 9.7E-20 160.5 28.2 167 22-200 2-171 (366)
76 PRK06814 acylglycerophosphoeth 99.7 1.6E-14 3.4E-19 180.1 35.6 129 57-203 52-182 (1140)
77 PRK10133 L-fucose transporter; 99.7 9.5E-14 2.1E-18 155.5 37.6 152 20-182 25-177 (438)
78 COG2271 UhpC Sugar phosphate p 99.7 1.1E-14 2.4E-19 156.2 25.1 180 17-215 21-205 (448)
79 TIGR00889 2A0110 nucleoside tr 99.7 1.9E-13 4.2E-18 152.1 34.8 141 28-182 9-154 (418)
80 TIGR00792 gph sugar (Glycoside 99.6 7E-14 1.5E-18 155.4 28.8 176 32-213 10-191 (437)
81 PRK11010 ampG muropeptide tran 99.6 1.4E-12 3.1E-17 148.1 39.0 171 23-211 14-190 (491)
82 TIGR00885 fucP L-fucose:H+ sym 99.6 1E-12 2.2E-17 146.0 36.1 178 23-211 5-202 (410)
83 KOG1330|consensus 99.6 5E-15 1.1E-19 160.2 15.9 181 16-215 28-208 (493)
84 TIGR00896 CynX cyanate transpo 99.6 2.4E-13 5.3E-18 147.1 28.0 148 41-208 20-167 (355)
85 TIGR00901 2A0125 AmpG-related 99.6 7E-13 1.5E-17 143.5 30.8 158 43-211 10-173 (356)
86 TIGR00805 oat sodium-independe 99.6 3.5E-13 7.5E-18 157.4 29.7 190 20-214 31-279 (633)
87 TIGR00883 2A0106 metabolite-pr 99.6 6.3E-13 1.4E-17 144.1 28.2 160 43-209 14-184 (394)
88 PRK15034 nitrate/nitrite trans 99.6 3E-12 6.6E-17 142.9 33.8 148 21-180 34-185 (462)
89 PRK11902 ampG muropeptide tran 99.6 3E-11 6.6E-16 133.4 40.8 162 31-210 9-176 (402)
90 TIGR01301 GPH_sucrose GPH fami 99.5 1E-10 2.2E-15 131.5 38.6 193 22-218 5-220 (477)
91 COG2223 NarK Nitrate/nitrite t 99.5 1.4E-11 3.1E-16 132.6 30.0 183 19-221 12-198 (417)
92 KOG0255|consensus 99.5 1.2E-11 2.5E-16 141.5 29.7 154 50-225 111-266 (521)
93 PRK09848 glucuronide transport 99.5 3.5E-11 7.6E-16 134.9 31.4 148 28-179 15-172 (448)
94 KOG0252|consensus 99.5 4.9E-13 1.1E-17 144.3 14.8 117 53-176 80-198 (538)
95 PRK09669 putative symporter Ya 99.5 4.3E-11 9.3E-16 134.1 29.7 176 29-210 17-198 (444)
96 PRK10429 melibiose:sodium symp 99.5 4.3E-11 9.4E-16 135.3 29.6 145 29-179 14-164 (473)
97 PF03825 Nuc_H_symport: Nucleo 99.4 1.1E-09 2.3E-14 121.3 37.5 135 28-176 9-143 (400)
98 PF13347 MFS_2: MFS/sugar tran 99.4 7.6E-11 1.6E-15 131.4 28.2 180 31-216 11-198 (428)
99 TIGR00806 rfc RFC reduced fola 99.4 2.2E-11 4.8E-16 134.4 21.7 151 40-211 44-198 (511)
100 COG0738 FucP Fucose permease [ 99.4 2.7E-09 5.9E-14 114.5 33.5 134 40-183 31-165 (422)
101 PRK10642 proline/glycine betai 99.4 6.3E-11 1.4E-15 134.6 22.6 153 21-183 250-403 (490)
102 TIGR02718 sider_RhtX_FptX side 99.3 4.1E-09 8.8E-14 115.8 36.0 176 23-214 3-182 (390)
103 TIGR00788 fbt folate/biopterin 99.3 9.7E-10 2.1E-14 124.3 31.4 173 20-210 24-203 (468)
104 PRK15011 sugar efflux transpor 99.3 1.2E-10 2.5E-15 128.4 23.1 178 16-213 211-388 (393)
105 KOG2533|consensus 99.3 5.6E-10 1.2E-14 125.9 28.4 155 50-217 74-228 (495)
106 PRK09556 uhpT sugar phosphate 99.3 1.5E-10 3.2E-15 130.7 21.4 183 21-213 258-446 (467)
107 KOG3764|consensus 99.3 3.2E-11 6.9E-16 128.4 14.6 147 51-215 100-246 (464)
108 PRK05122 major facilitator sup 99.3 2.5E-10 5.4E-15 125.5 21.9 166 32-219 227-392 (399)
109 PRK09705 cynX putative cyanate 99.3 5.7E-10 1.2E-14 123.1 24.7 176 21-215 205-380 (393)
110 PF01306 LacY_symp: LacY proto 99.3 1E-08 2.2E-13 112.5 33.9 178 20-215 6-187 (412)
111 cd06174 MFS The Major Facilita 99.3 4.4E-10 9.5E-15 119.4 21.7 173 21-212 175-348 (352)
112 TIGR00890 2A0111 Oxalate/Forma 99.3 2.1E-10 4.6E-15 123.5 19.1 169 22-208 206-374 (377)
113 TIGR01299 synapt_SV2 synaptic 99.3 4E-10 8.7E-15 133.0 22.6 134 60-213 598-731 (742)
114 KOG2615|consensus 99.3 5.4E-10 1.2E-14 118.6 21.1 119 52-183 63-181 (451)
115 PRK03699 putative transporter; 99.2 5.1E-10 1.1E-14 123.3 21.4 170 21-210 205-374 (394)
116 KOG2504|consensus 99.2 1.2E-09 2.5E-14 124.2 24.8 174 24-217 45-222 (509)
117 TIGR00926 2A1704 Peptide:H+ sy 99.2 8.1E-08 1.7E-12 112.3 40.0 590 52-680 15-652 (654)
118 PRK09952 shikimate transporter 99.2 6.2E-10 1.3E-14 124.7 21.8 182 18-213 247-430 (438)
119 PF06609 TRI12: Fungal trichot 99.2 2.7E-08 5.9E-13 114.0 35.1 147 44-211 66-212 (599)
120 PTZ00207 hypothetical protein; 99.2 1.9E-09 4E-14 124.0 25.2 152 42-210 47-199 (591)
121 TIGR00899 2A0120 sugar efflux 99.2 8.8E-10 1.9E-14 119.5 21.2 170 23-212 201-370 (375)
122 PRK11551 putative 3-hydroxyphe 99.2 1.4E-09 2.9E-14 119.9 21.8 163 28-209 227-389 (406)
123 TIGR00883 2A0106 metabolite-pr 99.2 3.2E-10 7E-15 122.8 16.3 166 20-202 218-387 (394)
124 KOG0253|consensus 99.2 1.2E-08 2.5E-13 107.8 26.4 167 36-223 92-260 (528)
125 TIGR00889 2A0110 nucleoside tr 99.2 1.4E-09 3E-14 121.1 20.8 183 24-216 211-402 (418)
126 PRK12382 putative transporter; 99.2 1.5E-09 3.4E-14 119.0 20.7 160 32-213 227-386 (392)
127 PRK09874 drug efflux system pr 99.2 1.3E-09 2.7E-14 119.9 19.9 164 32-214 230-396 (408)
128 PRK03633 putative MFS family t 99.2 3.1E-09 6.7E-14 116.5 22.6 155 34-211 213-367 (381)
129 PRK10489 enterobactin exporter 99.2 2.5E-09 5.4E-14 118.6 21.4 159 37-214 239-397 (417)
130 TIGR00893 2A0114 d-galactonate 99.1 2.7E-09 6E-14 115.1 20.7 178 21-212 215-395 (399)
131 TIGR00880 2_A_01_02 Multidrug 99.1 4.2E-10 9.1E-15 103.1 12.1 131 64-213 5-135 (141)
132 PRK11273 glpT sn-glycerol-3-ph 99.1 2.1E-09 4.5E-14 120.8 20.2 176 21-213 253-432 (452)
133 PRK11663 regulatory protein Uh 99.1 3.4E-09 7.3E-14 118.5 21.6 177 22-214 244-422 (434)
134 PRK03545 putative arabinose tr 99.1 5.5E-09 1.2E-13 114.8 22.7 173 23-215 207-379 (390)
135 TIGR00892 2A0113 monocarboxyla 99.1 1.1E-09 2.4E-14 123.3 17.1 175 22-214 242-419 (455)
136 TIGR00902 2A0127 phenyl propri 99.1 7.6E-09 1.6E-13 113.6 22.9 168 21-210 205-373 (382)
137 COG2271 UhpC Sugar phosphate p 99.1 1.6E-09 3.6E-14 116.8 16.9 179 21-215 252-433 (448)
138 PRK11462 putative transporter; 99.1 5.8E-08 1.3E-12 109.6 29.7 147 29-181 17-169 (460)
139 PRK03893 putative sialic acid 99.1 3.3E-09 7.1E-14 120.2 19.1 148 39-203 293-440 (496)
140 TIGR00891 2A0112 putative sial 99.1 2.7E-09 5.8E-14 116.5 17.7 139 34-183 251-389 (405)
141 TIGR00897 2A0118 polyol permea 99.1 1.1E-08 2.3E-13 113.2 22.6 177 21-214 222-399 (402)
142 PRK09528 lacY galactoside perm 99.1 1.9E-09 4.1E-14 119.8 16.6 160 35-213 237-400 (420)
143 COG2807 CynX Cyanate permease 99.1 2.2E-07 4.9E-12 98.7 30.4 161 34-215 25-185 (395)
144 COG2223 NarK Nitrate/nitrite t 99.0 6E-09 1.3E-13 112.5 17.7 183 20-215 217-400 (417)
145 PRK15075 citrate-proton sympor 99.0 1.1E-08 2.4E-13 114.3 20.6 144 30-183 247-393 (434)
146 PRK10406 alpha-ketoglutarate t 99.0 1.7E-08 3.7E-13 112.7 21.8 163 32-211 254-419 (432)
147 COG2211 MelB Na+/melibiose sym 99.0 1.1E-07 2.5E-12 105.5 26.5 150 28-183 19-174 (467)
148 TIGR00879 SP MFS transporter, 99.0 1.1E-08 2.3E-13 113.7 18.6 162 40-214 303-468 (481)
149 PF11700 ATG22: Vacuole efflux 99.0 2.9E-08 6.3E-13 112.1 22.2 183 21-214 281-466 (477)
150 PRK11010 ampG muropeptide tran 99.0 2.8E-08 6.1E-13 113.1 22.1 178 24-216 225-403 (491)
151 TIGR00900 2A0121 H+ Antiporter 99.0 2.9E-08 6.2E-13 106.5 19.5 152 21-183 210-362 (365)
152 PRK10504 putative transporter; 99.0 4.2E-08 9.2E-13 110.5 21.6 154 21-183 261-414 (471)
153 TIGR02332 HpaX 4-hydroxyphenyl 99.0 1.9E-08 4.2E-13 111.7 18.1 165 22-204 243-409 (412)
154 PRK15402 multidrug efflux syst 99.0 1E-07 2.2E-12 105.3 23.4 153 23-183 217-369 (406)
155 COG2814 AraJ Arabinose efflux 99.0 4.4E-08 9.5E-13 106.7 19.9 176 21-217 211-387 (394)
156 PRK11128 putative 3-phenylprop 98.9 9E-08 1.9E-12 105.0 22.4 149 21-183 205-354 (382)
157 PRK10091 MFS transport protein 98.9 6.5E-08 1.4E-12 106.1 21.2 171 23-212 201-372 (382)
158 TIGR00711 efflux_EmrB drug res 98.9 3.5E-08 7.6E-13 111.1 19.4 153 23-183 257-409 (485)
159 TIGR00895 2A0115 benzoate tran 98.9 4.2E-08 9.1E-13 106.6 19.2 145 24-181 253-397 (398)
160 TIGR00712 glpT glycerol-3-phos 98.9 3.1E-08 6.8E-13 110.8 18.6 175 22-213 252-430 (438)
161 TIGR01272 gluP glucose/galacto 98.9 9.1E-08 2E-12 102.4 20.9 159 22-202 141-301 (310)
162 PRK14995 methyl viologen resis 98.9 3.6E-08 7.8E-13 112.2 18.8 152 22-183 260-412 (495)
163 KOG2563|consensus 98.9 8E-07 1.7E-11 96.9 27.8 195 16-218 37-237 (480)
164 PLN00028 nitrate transmembrane 98.9 4.2E-08 9.1E-13 111.2 19.1 175 23-216 254-433 (476)
165 PRK12307 putative sialic acid 98.9 1.1E-07 2.5E-12 105.3 21.5 133 38-183 248-382 (426)
166 TIGR02718 sider_RhtX_FptX side 98.9 1.2E-07 2.7E-12 104.1 21.3 174 23-209 210-384 (390)
167 TIGR00896 CynX cyanate transpo 98.9 1.2E-07 2.6E-12 102.6 20.6 151 21-184 197-348 (355)
168 KOG4686|consensus 98.9 6.8E-08 1.5E-12 98.8 17.1 155 15-183 258-413 (459)
169 PF05631 DUF791: Protein of un 98.9 4.2E-06 9.2E-11 89.6 31.5 150 50-213 62-213 (354)
170 COG2270 Permeases of the major 98.9 3E-08 6.4E-13 107.3 15.2 173 22-212 253-425 (438)
171 TIGR00882 2A0105 oligosacchari 98.9 1E-07 2.2E-12 105.0 19.1 170 23-211 217-390 (396)
172 TIGR00881 2A0104 phosphoglycer 98.9 5.5E-08 1.2E-12 104.7 16.5 161 22-198 217-379 (379)
173 TIGR00792 gph sugar (Glycoside 98.8 8.5E-08 1.8E-12 106.6 18.2 155 21-183 222-379 (437)
174 TIGR00710 efflux_Bcr_CflA drug 98.8 2.9E-07 6.3E-12 100.0 21.8 148 23-178 208-356 (385)
175 PRK10133 L-fucose transporter; 98.8 1.9E-07 4.2E-12 104.7 20.8 162 24-207 261-424 (438)
176 TIGR00894 2A0114euk Na(+)-depe 98.8 2.1E-07 4.5E-12 104.8 21.0 180 21-214 261-448 (465)
177 PRK08633 2-acyl-glycerophospho 98.8 9.8E-08 2.1E-12 119.3 20.1 149 23-183 234-383 (1146)
178 KOG2325|consensus 98.8 3.6E-07 7.8E-12 101.8 21.7 159 14-181 27-188 (488)
179 PF05977 MFS_3: Transmembrane 98.8 3E-07 6.4E-12 105.2 21.6 169 26-213 223-391 (524)
180 PRK10213 nepI ribonucleoside t 98.8 5.1E-07 1.1E-11 99.7 22.9 167 21-208 216-383 (394)
181 PF03209 PUCC: PUCC protein; 98.8 1E-05 2.2E-10 87.9 32.2 130 48-183 6-150 (403)
182 PRK10077 xylE D-xylose transpo 98.8 3.8E-07 8.2E-12 102.7 22.0 160 43-212 293-453 (479)
183 PRK06814 acylglycerophosphoeth 98.8 1.5E-07 3.2E-12 117.8 18.9 172 21-203 225-409 (1140)
184 PF11700 ATG22: Vacuole efflux 98.7 9.6E-05 2.1E-09 83.8 37.8 114 58-181 71-211 (477)
185 PRK15034 nitrate/nitrite trans 98.7 7.5E-07 1.6E-11 99.9 20.2 181 21-213 252-451 (462)
186 TIGR00901 2A0125 AmpG-related 98.7 3.1E-07 6.7E-12 99.4 16.6 140 23-168 211-355 (356)
187 PRK09848 glucuronide transport 98.7 2.3E-07 5.1E-12 104.0 15.9 156 21-183 228-387 (448)
188 KOG3626|consensus 98.7 5.5E-06 1.2E-10 96.2 27.2 176 39-219 114-346 (735)
189 PRK11902 ampG muropeptide tran 98.7 1.7E-06 3.6E-11 95.7 22.2 151 42-212 230-386 (402)
190 COG2807 CynX Cyanate permease 98.7 1.3E-06 2.8E-11 93.0 20.0 161 22-200 209-369 (395)
191 PF13347 MFS_2: MFS/sugar tran 98.7 6.3E-07 1.4E-11 100.0 18.7 156 21-183 225-383 (428)
192 PRK11646 multidrug resistance 98.7 7.2E-07 1.6E-11 98.8 18.7 132 39-183 226-358 (400)
193 PRK10054 putative transporter; 98.7 5.9E-07 1.3E-11 99.2 17.2 164 22-204 207-372 (395)
194 TIGR00887 2A0109 phosphate:H+ 98.7 5.4E-07 1.2E-11 102.8 16.9 170 32-210 299-483 (502)
195 PF07690 MFS_1: Major Facilita 98.6 2.2E-07 4.8E-12 99.2 12.6 141 26-175 211-352 (352)
196 TIGR00898 2A0119 cation transp 98.6 1E-06 2.2E-11 100.2 18.2 139 51-211 352-490 (505)
197 PRK11195 lysophospholipid tran 98.6 2.7E-06 5.9E-11 93.9 21.0 135 36-183 220-355 (393)
198 PRK10473 multidrug efflux syst 98.6 3.9E-06 8.5E-11 92.1 21.8 69 39-108 221-289 (392)
199 PRK11043 putative transporter; 98.6 5.8E-06 1.3E-10 91.0 22.9 140 32-183 214-356 (401)
200 KOG2504|consensus 98.6 6.9E-07 1.5E-11 101.8 15.4 177 21-216 298-476 (509)
201 PRK11102 bicyclomycin/multidru 98.6 6.3E-06 1.4E-10 89.6 21.9 147 24-179 197-344 (377)
202 TIGR00903 2A0129 major facilit 98.6 4.1E-06 8.8E-11 91.9 20.4 165 21-211 192-360 (368)
203 KOG4686|consensus 98.5 6.8E-07 1.5E-11 91.6 12.0 132 44-184 66-198 (459)
204 PRK10429 melibiose:sodium symp 98.5 3.6E-06 7.8E-11 95.4 18.3 159 21-183 231-392 (473)
205 PRK09669 putative symporter Ya 98.5 6.8E-06 1.5E-10 92.2 18.6 156 21-183 229-387 (444)
206 KOG2816|consensus 98.4 4.2E-05 9.2E-10 86.0 24.5 127 67-217 72-200 (463)
207 TIGR00886 2A0108 nitrite extru 98.4 1.8E-06 3.9E-11 93.3 12.7 139 23-170 227-365 (366)
208 TIGR00885 fucP L-fucose:H+ sym 98.4 1.5E-05 3.2E-10 88.8 19.9 166 23-204 234-400 (410)
209 PRK11652 emrD multidrug resist 98.4 3.7E-05 8E-10 84.4 22.4 133 41-183 227-359 (394)
210 KOG2532|consensus 98.4 7.2E-06 1.6E-10 92.4 16.7 182 21-215 258-446 (466)
211 PF03825 Nuc_H_symport: Nucleo 98.4 4.8E-05 1E-09 84.4 21.9 182 26-215 212-394 (400)
212 KOG0253|consensus 98.3 1.7E-05 3.6E-10 84.5 14.5 148 19-178 324-490 (528)
213 KOG3098|consensus 98.3 0.00078 1.7E-08 75.3 28.6 104 63-179 56-159 (461)
214 PF06813 Nodulin-like: Nodulin 98.3 0.00014 3E-09 75.3 21.1 133 42-181 22-154 (250)
215 PF03137 OATP: Organic Anion T 98.2 1.4E-07 3.1E-12 108.1 -1.6 181 35-220 16-254 (539)
216 PF03092 BT1: BT1 family; Int 98.2 0.00065 1.4E-08 76.3 27.6 154 43-209 11-168 (433)
217 COG2211 MelB Na+/melibiose sym 98.2 7.8E-05 1.7E-09 83.2 19.4 157 21-183 236-395 (467)
218 TIGR01272 gluP glucose/galacto 98.2 0.0004 8.6E-09 74.4 24.2 88 119-210 11-107 (310)
219 PRK11462 putative transporter; 98.2 9.4E-05 2E-09 83.6 19.8 156 21-183 228-386 (460)
220 KOG0569|consensus 98.2 9E-05 2E-09 83.3 19.0 160 19-183 267-429 (485)
221 PF03209 PUCC: PUCC protein; 98.2 0.00015 3.2E-09 79.1 20.1 172 32-212 219-394 (403)
222 TIGR00924 yjdL_sub1_fam amino 98.1 9.5E-05 2.1E-09 84.0 18.9 179 27-216 278-468 (475)
223 COG0477 ProP Permeases of the 98.1 0.00026 5.6E-09 72.1 19.2 148 42-204 23-173 (338)
224 PF01306 LacY_symp: LacY proto 98.1 0.00017 3.6E-09 79.7 18.6 174 21-213 220-397 (412)
225 PRK15403 multidrug efflux syst 98.1 0.00029 6.2E-09 78.4 20.5 153 21-183 218-372 (413)
226 PRK10207 dipeptide/tripeptide 98.0 0.00017 3.8E-09 82.1 16.6 143 34-181 282-438 (489)
227 COG2270 Permeases of the major 98.0 0.0023 5E-08 70.0 23.9 129 40-178 34-171 (438)
228 PF12832 MFS_1_like: MFS_1 lik 97.9 8.6E-05 1.9E-09 62.5 9.8 65 31-97 10-74 (77)
229 KOG3762|consensus 97.9 0.00028 6.1E-09 78.8 16.3 68 35-104 25-92 (618)
230 COG0738 FucP Fucose permease [ 97.9 0.00068 1.5E-08 73.6 18.9 167 23-211 238-404 (422)
231 PRK09584 tppB putative tripept 97.9 0.00067 1.4E-08 77.6 18.9 143 32-179 283-439 (500)
232 TIGR00788 fbt folate/biopterin 97.7 0.0002 4.3E-09 81.2 11.4 131 49-184 280-413 (468)
233 KOG3764|consensus 97.6 0.00011 2.4E-09 79.2 7.5 164 35-214 284-452 (464)
234 KOG2533|consensus 97.6 0.0007 1.5E-08 76.9 13.5 165 22-203 274-443 (495)
235 TIGR01301 GPH_sucrose GPH fami 97.6 0.0021 4.6E-08 72.8 17.2 196 14-217 251-472 (477)
236 TIGR00769 AAA ADP/ATP carrier 97.5 0.17 3.7E-06 57.3 30.9 153 20-182 6-189 (472)
237 PF01770 Folate_carrier: Reduc 97.5 0.12 2.6E-06 57.2 28.2 153 41-211 23-177 (412)
238 KOG3762|consensus 97.4 0.0011 2.5E-08 74.1 11.9 171 28-218 378-549 (618)
239 PF05978 UNC-93: Ion channel r 97.4 0.006 1.3E-07 58.6 15.1 107 63-182 43-149 (156)
240 KOG4332|consensus 97.3 0.0026 5.6E-08 65.3 11.3 90 46-145 61-152 (454)
241 PF06609 TRI12: Fungal trichot 97.2 0.0081 1.8E-07 69.5 15.9 163 9-182 299-465 (599)
242 PTZ00207 hypothetical protein; 97.2 0.0043 9.4E-08 71.9 13.5 180 21-216 353-552 (591)
243 KOG0637|consensus 97.1 0.0098 2.1E-07 65.7 15.2 156 22-181 33-202 (498)
244 KOG0254|consensus 97.0 0.02 4.4E-07 65.6 16.7 141 19-167 292-440 (513)
245 KOG2615|consensus 97.0 0.0086 1.9E-07 64.7 12.4 150 23-183 262-413 (451)
246 PF00083 Sugar_tr: Sugar (and 96.7 8.5E-06 1.8E-10 91.1 -13.1 133 44-183 275-410 (451)
247 TIGR00805 oat sodium-independe 96.5 0.014 3E-07 68.8 10.7 82 22-104 331-415 (633)
248 TIGR00880 2_A_01_02 Multidrug 96.4 0.021 4.6E-07 51.5 9.7 81 596-676 57-138 (141)
249 PRK03612 spermidine synthase; 96.4 0.23 5.1E-06 57.1 19.8 152 20-182 16-169 (521)
250 PRK15462 dipeptide/tripeptide 96.1 0.47 1E-05 54.2 20.1 143 34-181 281-437 (493)
251 KOG0255|consensus 96.1 0.51 1.1E-05 54.1 20.6 105 69-182 362-466 (521)
252 KOG2816|consensus 96.0 0.048 1E-06 61.7 11.2 127 43-182 263-390 (463)
253 KOG2563|consensus 95.9 0.036 7.7E-07 61.3 9.4 150 23-183 268-420 (480)
254 KOG0252|consensus 95.9 0.022 4.8E-07 63.0 7.6 132 73-214 364-496 (538)
255 PF06779 DUF1228: Protein of u 95.4 0.19 4.1E-06 43.1 10.0 67 41-109 12-78 (85)
256 KOG1330|consensus 94.4 0.071 1.5E-06 59.2 6.1 87 603-689 134-222 (493)
257 PF03219 TLC: TLC ATP/ADP tran 94.2 13 0.00029 42.4 26.2 110 69-183 71-205 (491)
258 PF02487 CLN3: CLN3 protein; 93.4 15 0.00033 40.7 25.6 123 60-205 62-184 (402)
259 PF06963 FPN1: Ferroportin1 (F 93.2 4.3 9.2E-05 45.6 17.6 133 42-180 279-414 (432)
260 TIGR00806 rfc RFC reduced fola 93.1 1.6 3.4E-05 49.6 13.9 68 590-659 115-182 (511)
261 PF03137 OATP: Organic Anion T 93.0 0.028 6E-07 64.9 0.0 155 25-183 309-513 (539)
262 COG3104 PTR2 Dipeptide/tripept 92.3 3.7 8E-05 46.4 15.3 134 41-179 304-451 (498)
263 PF06963 FPN1: Ferroportin1 (F 91.9 25 0.00055 39.5 32.1 179 23-209 4-193 (432)
264 KOG3098|consensus 91.4 9 0.0002 43.3 17.3 106 65-177 287-407 (461)
265 KOG4332|consensus 90.1 2.9 6.4E-05 43.6 10.9 138 59-211 284-426 (454)
266 KOG3626|consensus 89.1 1.5 3.3E-05 51.9 9.0 74 23-96 394-469 (735)
267 COG3202 ATP/ADP translocase [E 87.1 61 0.0013 36.9 29.8 151 21-183 27-209 (509)
268 KOG3574|consensus 86.0 33 0.00072 37.9 16.0 153 16-178 26-189 (510)
269 TIGR00769 AAA ADP/ATP carrier 85.9 70 0.0015 36.5 21.2 144 53-207 157-345 (472)
270 KOG3097|consensus 83.1 13 0.00027 40.2 11.2 112 19-146 27-138 (390)
271 PF02487 CLN3: CLN3 protein; 82.5 17 0.00036 40.4 12.6 60 119-182 336-395 (402)
272 TIGR00939 2a57 Equilibrative N 78.7 33 0.00072 38.7 13.6 116 58-179 308-429 (437)
273 PF06813 Nodulin-like: Nodulin 72.9 6.8 0.00015 40.7 5.7 88 591-679 96-184 (250)
274 PF00854 PTR2: POT family; In 72.3 8.3 0.00018 42.1 6.6 96 587-682 30-129 (372)
275 KOG3810|consensus 72.3 1.3E+02 0.0028 33.1 14.9 129 42-183 25-155 (433)
276 PF03219 TLC: TLC ATP/ADP tran 69.4 2.2E+02 0.0047 32.8 22.5 147 53-210 172-364 (491)
277 KOG1479|consensus 66.5 2.2E+02 0.0047 31.8 17.9 57 590-646 343-399 (406)
278 KOG2325|consensus 64.5 10 0.00022 43.2 5.2 180 21-212 262-471 (488)
279 PF03092 BT1: BT1 family; Int 60.9 52 0.0011 36.9 10.2 124 54-183 252-379 (433)
280 PF01770 Folate_carrier: Reduc 59.8 1E+02 0.0022 34.4 12.0 100 55-164 283-382 (412)
281 KOG1237|consensus 59.7 68 0.0015 37.5 11.1 77 287-371 196-273 (571)
282 KOG1479|consensus 52.4 48 0.001 36.9 7.7 129 43-178 265-399 (406)
283 COG3202 ATP/ADP translocase [E 51.3 4.3E+02 0.0093 30.3 19.5 149 54-213 177-370 (509)
284 COG4262 Predicted spermidine s 50.6 3.8E+02 0.0083 29.5 15.2 128 39-175 28-160 (508)
285 KOG0637|consensus 47.5 56 0.0012 36.9 7.3 91 15-106 273-380 (498)
286 PF11947 DUF3464: Protein of u 46.0 93 0.002 29.8 7.6 81 79-173 56-145 (153)
287 PF06645 SPC12: Microsomal sig 45.3 67 0.0015 26.9 5.9 49 162-220 12-60 (76)
288 KOG4112|consensus 42.8 62 0.0013 28.1 5.2 54 158-221 23-76 (101)
289 TIGR00939 2a57 Equilibrative N 38.4 6.2E+02 0.013 28.5 15.8 55 591-645 373-427 (437)
290 PF02694 UPF0060: Uncharacteri 36.7 3.1E+02 0.0068 24.6 9.1 50 56-106 53-102 (107)
291 COG5336 Uncharacterized protei 35.8 1.2E+02 0.0027 27.1 6.1 31 63-93 48-78 (116)
292 PF12133 Sars6: Open reading f 35.3 72 0.0016 24.6 4.0 38 598-648 7-44 (62)
293 PF12832 MFS_1_like: MFS_1 lik 34.1 1.4E+02 0.003 24.9 6.1 30 319-349 37-66 (77)
294 KOG3810|consensus 31.3 3.7E+02 0.0081 29.7 10.1 96 60-165 274-369 (433)
295 PRK02237 hypothetical protein; 31.1 4E+02 0.0086 24.0 10.0 48 57-105 56-103 (109)
296 PF06779 DUF1228: Protein of u 30.8 3.3E+02 0.0071 23.3 7.9 48 129-183 5-52 (85)
297 PF09527 ATPase_gene1: Putativ 29.1 2.6E+02 0.0057 21.4 6.7 30 65-94 8-37 (55)
298 PF01733 Nucleoside_tran: Nucl 28.4 21 0.00046 38.0 0.4 112 62-179 187-305 (309)
299 KOG2082|consensus 28.2 9.9E+02 0.022 29.0 13.4 22 88-109 496-517 (1075)
300 PF05631 DUF791: Protein of un 27.0 8.7E+02 0.019 26.6 19.8 153 22-176 120-300 (354)
301 PRK10633 hypothetical protein; 26.7 1.7E+02 0.0037 24.9 5.3 22 668-689 58-79 (80)
302 PF14344 DUF4397: Domain of un 25.8 76 0.0017 28.5 3.5 45 444-489 65-111 (122)
303 PRK03612 spermidine synthase; 24.1 1.1E+03 0.025 27.0 16.0 23 156-178 147-169 (521)
304 PF05915 DUF872: Eukaryotic pr 23.6 2.8E+02 0.0061 25.2 6.6 64 621-684 39-109 (115)
305 PRK10263 DNA translocase FtsK; 23.5 4.2E+02 0.0091 34.1 10.0 16 168-183 141-156 (1355)
306 PF07672 MFS_Mycoplasma: Mycop 23.3 2.8E+02 0.0061 29.0 7.4 64 154-219 2-65 (267)
307 PF06196 DUF997: Protein of un 21.9 2.6E+02 0.0057 23.7 5.7 27 663-689 53-79 (80)
308 PF07672 MFS_Mycoplasma: Mycop 21.9 7.9E+02 0.017 25.8 10.3 95 63-162 147-246 (267)
309 COG1742 Uncharacterized conser 21.9 5.2E+02 0.011 23.1 7.5 48 55-103 53-100 (109)
310 PF12676 DUF3796: Protein of u 21.0 3.4E+02 0.0074 24.7 6.6 39 650-689 79-117 (118)
No 1
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=2.1e-62 Score=565.11 Aligned_cols=623 Identities=45% Similarity=0.740 Sum_probs=504.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy195 35 FCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLN 114 (691)
Q Consensus 35 ~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~ 114 (691)
++|||+...+..|+++.+|++.+.+..+...+...+++.++++|+++|+++||++++.++.+++.+|.+++++++.+...
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999998876543221
Q ss_pred Cchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCc
Q psy195 115 IPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEAC 193 (691)
Q Consensus 115 ~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~ 193 (691)
.... ...++++.+.++|.|+++|++.++++||++ +.++++|.++++|+|+++|+|+++++.+.+++.+..+|||...+
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~-~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~ 159 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE-ERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC 159 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcC-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc
Confidence 1112 457789999999999999999999999998 66667799999999999999999999999998765556665568
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccccCCCCCcchhHHHHHHHHHhhhcccccccccccchhhhcccccCCccHHHHH
Q psy195 194 FPLAFGVPALLMFLAIIVFIIGKPMYKINKPKGNVALEVFQCTIRAIKNKFKTKKSERTKEHWLDYANDKYDQGTIEDIK 273 (691)
Q Consensus 194 w~~~F~i~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~i~~vi~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~k 273 (691)
|+.+|.+++++++++++++..+++++++.+|.+++..++.+++..+.+++...... +...+|++++.....+++++|+|
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~-~~~~~~ld~a~~~~~~~~V~evk 238 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE-HWPLHWLDYAKDKHDIRMIRSTK 238 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc-ccchhHHHHhccccccchHHHHH
Confidence 99999999999999999999999888877787787888888888777765433221 11156777766666667889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHhcCcccCCceeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCC-C
Q psy195 274 TLLRILLLFVPLPIFWALFDQQGSRWTFQANRMDGRVFGTSLEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLN-R 352 (691)
Q Consensus 274 ~~l~~l~l~~~~~~~~~~~~q~~s~~~~~~~~~~~~l~~G~~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~-s 352 (691)
++++++++++..+++|..+.|.++.+..|+.+++.++ +++++++++++.+|++.++++.|++++.++|+++|++.+ +
T Consensus 239 rll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l--~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~ls 316 (654)
T TIGR00926 239 RLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDV--GGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTRFT 316 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCcc--CCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999998877 788999999999999999999999999999999999777 9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEEecCC--CceeEecCCCcc----cccccc--c---cc
Q psy195 353 PLRKLTVGGLLAALSFVVSALVEFNIRAHSQIAPQDRHFSLRIYNSMD--CDFVFHSPLKNE----RVLRAM--D---ML 421 (691)
Q Consensus 353 ~l~~i~iG~ll~~~s~li~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~--~---~~ 421 (691)
+++|+++|++++++++++++.+|..++++.+..|..+.+.+..+|..+ |.+.+..+..+. .-+++. + ++
T Consensus 317 ~l~k~~iG~~la~la~~va~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (654)
T TIGR00926 317 SLRKMAVGGLLAALSFFVAALVQLKVNPTLPEEPSANEIFLQVLNTDCTICDFSVLSKRVLPHDVYLHLDKKNTSGDQGL 396 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcceEEEEecCCCCcceEEEEecCCcccccccccCcccccccccc
Confidence 999999999999999999999999999999999999999999999977 999998776431 123443 2 11
Q ss_pred cccc-----c--cccccccccc-----cCCCCCCCcccccccceeeee-ccCCcceeeeeecchhhhhhcccCcceeeee
Q psy195 422 ALNN-----I--PINGTQHFAA-----LFEPSTSCPYVLNKTFQSSVL-GADGKITEYYLIRDEKQQAHLKRLGEFHDLR 488 (691)
Q Consensus 422 ~~~~-----~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (691)
.++. . +.+++ ... ..|.+.++...+++++.++++ ..++..+.-...++ ...||++|.+.+|+++
T Consensus 397 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 473 (654)
T TIGR00926 397 FTTKSSAKGWTLTYDLS--YDGACGLTGNCPKTTDAHELEPKISYVLLLSQGGYQLTANTDKP-TDAKTEKGMGSVRLVN 473 (654)
T ss_pred ccccccccccceEEEEe--ccccccccCCCCccccceeecCCceEEEEEecCCcceeeeeecC-ccCCCCCCCceEEEEe
Confidence 1111 1 12222 111 113333455667778888888 44443232233444 6679999999999999
Q ss_pred ccCchhhhhhhhccccccccceeeecCCccc-cCCCCCCcccceeecC-cccceeeecccchhhh---ccccccCCceeE
Q psy195 489 NINSSLKMQILYGSELQGKRITLESDDGFYQ-DIDLPTGACYTEYIEG-IPAGVYEVRSENKVLK---SNMELQDDNVYV 563 (691)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 563 (691)
+.+++ -.+++.++.++. ..+..+.+.|..+..| .++..... .....+. .....+.||.|+
T Consensus 474 ~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 538 (654)
T TIGR00926 474 TLNGE--------------FGMISLCTSDSDSVTPCNPRDPYDFYFRGTKYPANTCD-RIDNAKSSTFLSNQLDMGIYYL 538 (654)
T ss_pred cCCCc--------------ceeeEEecccCcccccCCcccccccccccceeeeeecc-cccccccccccccccccceEEE
Confidence 87554 034555555543 4444667888887777 66553311 1111111 112257799999
Q ss_pred EeeccCCCCccccccccccCCCCceeeehhhHHHHHHHHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHH
Q psy195 564 LNLNTEASPEHRTARLLKDDSSNKVSMLWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVA 643 (691)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~ 643 (691)
+.++++...+...++.+++.++|.+|++||+|||++++++|+++++|++||+|+|||++||+.++|+|+++.++||+|+.
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~ 618 (654)
T TIGR00926 539 IVITENSKIDELQAQIVELVSVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVV 618 (654)
T ss_pred EEEcCCCCCCcceeEEEEecCCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876521233367788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCchHHHHHHHHHHHHHHHHHHHhhhccc
Q psy195 644 IVAEAKIFENQAYEFLLFASLMVVDMGVFALLAMRY 679 (691)
Q Consensus 644 ~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 679 (691)
++++...++.||.+|++||++|++.+++|.++++.|
T Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~Y 654 (654)
T TIGR00926 619 VIAEFENFSVQAAEFFLFASLMLVVMAIFSILAYFY 654 (654)
T ss_pred HHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999876
No 2
>KOG1237|consensus
Probab=100.00 E-value=7.3e-50 Score=453.53 Aligned_cols=465 Identities=32% Similarity=0.548 Sum_probs=399.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHH
Q psy195 17 PKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSI 96 (691)
Q Consensus 17 ~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~i 96 (691)
...++++.++++.+.+++.+++++..++..|++..+|.+...+...+..+...+...++++++++|.|+||++++.++.+
T Consensus 33 ~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~ 112 (571)
T KOG1237|consen 33 TGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSL 112 (571)
T ss_pred echhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-cCCCC--------------Cch--h-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcch--hhhH
Q psy195 97 VYLGGNVLLTVTA-IDPLN--------------IPK--R-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQ--SAQL 156 (691)
Q Consensus 97 l~~ig~ill~~s~-~~~~~--------------~~~--~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~--~~~r 156 (691)
++.+|+.++++++ .+.+. ..+ + ..++.++.+.++|.|+.+|++.++.+|||++..+ ...+
T Consensus 113 i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~ 192 (571)
T KOG1237|consen 113 ISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGI 192 (571)
T ss_pred HHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCc
Confidence 9999988887663 33211 112 1 6888999999999999999999999999983222 3345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcccccccCCCCCcchhHHHHH
Q psy195 157 EKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYKINKPKGNVALEVFQCT 236 (691)
Q Consensus 157 g~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~i~~vi 236 (691)
.++++|+++..++|..++-.+..++++ +.+|..+|.++.+++++++++|+.+.+.|++++|.++|..++.+++
T Consensus 193 ~~fFnW~yf~~~~g~l~a~t~~vyiq~-------~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vl 265 (571)
T KOG1237|consen 193 PSFFNWFYFSQNGGALLAQTVLVYIQD-------NVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVL 265 (571)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhh-------cccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHH
Confidence 589999999999999999999989877 6889999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccccccc---------------ccc-cchhhhcccc----------------cCCccHHHHHHHHHHHHHHHH
Q psy195 237 IRAIKNKFKTKKSE---------------RTK-EHWLDYANDK----------------YDQGTIEDIKTLLRILLLFVP 284 (691)
Q Consensus 237 ~~~i~~~~~~~~~~---------------~~~-~~~l~~~~~~----------------~~~~~v~~~k~~l~~l~l~~~ 284 (691)
..+.++|....+.+ +.+ .+++|++... +..+++||.|++++.++++..
T Consensus 266 vaa~~k~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~ 345 (571)
T KOG1237|consen 266 VAAAFKRKAVVSLDPEELYYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLT 345 (571)
T ss_pred HHHHHHHhccCCCcchhccccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHH
Confidence 99998876433211 111 3455554321 456789999999999999999
Q ss_pred HHHHHHHHhcccchHHHHHHHhcCcccCCc-eeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCC---C-CchhHHHH
Q psy195 285 LPIFWALFDQQGSRWTFQANRMDGRVFGTS-LEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGL---N-RPLRKLTV 359 (691)
Q Consensus 285 ~~~~~~~~~q~~s~~~~~~~~~~~~l~~G~-~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~---~-s~l~~i~i 359 (691)
.++++.++.|+.+.++.|+..|++++ ++ +++|++.++.+..+.+++..|+.+++++|+.+|... . ++++|+.+
T Consensus 346 ~i~~~~~~aq~~t~~v~Q~~~mdr~~--~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~ 423 (571)
T KOG1237|consen 346 TIIYSTVYAQMVTFFVLQATTMDRHL--GSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGI 423 (571)
T ss_pred HHHHHHHHHhhhhheehhhhhcCCCC--CCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeec
Confidence 99999999999999999999999998 77 999999999999999999999999999999998754 2 89999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEEecCCCceeEecCCCcccccccccccccccccccccccccccCC
Q psy195 360 GGLLAALSFVVSALVEFNIRAHSQIAPQDRHFSLRIYNSMDCDFVFHSPLKNERVLRAMDMLALNNIPINGTQHFAALFE 439 (691)
Q Consensus 360 G~ll~~~s~li~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (691)
|+++..++|..++.+|.++.+....
T Consensus 424 G~~~si~sm~~aa~vE~krl~~~~~------------------------------------------------------- 448 (571)
T KOG1237|consen 424 GLVLSILSMAVAGIVEAKRLKTAVS------------------------------------------------------- 448 (571)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhh-------------------------------------------------------
Confidence 9999999999999999876321000
Q ss_pred CCCCCcccccccceeeeeccCCcceeeeeecchhhhhhcccCcceeeeeccCchhhhhhhhccccccccceeeecCCccc
Q psy195 440 PSTSCPYVLNKTFQSSVLGADGKITEYYLIRDEKQQAHLKRLGEFHDLRNINSSLKMQILYGSELQGKRITLESDDGFYQ 519 (691)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (691)
T Consensus 449 -------------------------------------------------------------------------------- 448 (571)
T KOG1237|consen 449 -------------------------------------------------------------------------------- 448 (571)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCcccceeecCcccceeeecccchhhhccccccCCceeEEeeccCCCCccccccccccCCCCceeeehhhHHHHH
Q psy195 520 DIDLPTGACYTEYIEGIPAGVYEVRSENKVLKSNMELQDDNVYVLNLNTEASPEHRTARLLKDDSSNKVSMLWLFPQYII 599 (691)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~w~~pq~~~ 599 (691)
...+++++|++||+|||++
T Consensus 449 -------------------------------------------------------------~~~~~~~mSi~W~iPQyvL 467 (571)
T KOG1237|consen 449 -------------------------------------------------------------LLVETNPMSILWQIPQYVL 467 (571)
T ss_pred -------------------------------------------------------------ccCCCCCeeHHHHHHHHHH
Confidence 0123468899999999999
Q ss_pred HHHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHhhhhhcCCc----------------hHHHHHHHHH
Q psy195 600 ITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIVAEAKIFEN----------------QAYEFLLFAS 663 (691)
Q Consensus 600 ~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v~~~~~~~~----------------~~~~~~~~a~ 663 (691)
+|++|++++++++||+|+|||++|||.++|+|+++.++||+++..+..+..... -.++||+++.
T Consensus 468 ig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~~~~w~~~~~ln~~~ld~Fy~lla~ 547 (571)
T KOG1237|consen 468 LGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTGKAAEWLGFANLNKGRLDYFYWLLAV 547 (571)
T ss_pred HHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCChhHhhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998766653322111 1347999999
Q ss_pred HHHHHHHHHHhhhccceecCCCc
Q psy195 664 LMVVDMGVFALLAMRYKYVEEDE 686 (691)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~ 686 (691)
+..++...|.+++++|++++.++
T Consensus 548 ~~~~n~~~~~~~~~~y~~~~~~~ 570 (571)
T KOG1237|consen 548 YSAVNFLYFLICAKRYDYKDDKD 570 (571)
T ss_pred HHhhhhhheEEEEEeeeeccccC
Confidence 99999999999999999987664
No 3
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-46 Score=408.40 Aligned_cols=447 Identities=28% Similarity=0.433 Sum_probs=352.9
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCch
Q psy195 12 SPSEQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLL----YDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGK 87 (691)
Q Consensus 12 ~~~~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg----~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGR 87 (691)
..+...+|||.++.++.++++||++|||+...+..|++.+++ ++++++..+.+.|....++.+++|||++||++|+
T Consensus 12 ~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~ 91 (498)
T COG3104 12 LEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT 91 (498)
T ss_pred cccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 445566799999999999999999999999999999999888 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHH
Q psy195 88 FLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSI 167 (691)
Q Consensus 88 kk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~ 167 (691)
||++..|.+++++|+++++.++.... ..++++++++++|+|++++++.++++|++| +.+++ |...++++|+++
T Consensus 92 ~~tI~lGail~~iGh~~L~~~~~~~~-----~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~-~~Dpr-rD~gFt~fY~~i 164 (498)
T COG3104 92 RRTIVLGAILMAIGHLVLAISSVSGP-----GGLYIGLALIIVGTGLFKPNISSLLGELYP-KDDPR-RDGGFTLFYMGI 164 (498)
T ss_pred hHHHHHHHHHHHHHHHHHhccccccc-----cHHHHHHHHHHhccccccccHHHHHHHhcC-CCCcc-cCCCccEEEEEe
Confidence 99999999999999999998741111 688999999999999999999999999998 66666 899999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcccccccCC--CCCcc-----hh-HHHHHHHH
Q psy195 168 NAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYKINKP--KGNVA-----LE-VFQCTIRA 239 (691)
Q Consensus 168 nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~~~~~--~~~~~-----~~-i~~vi~~~ 239 (691)
|+|++++|.+++++.+ +.||+.+|.++++.+.++++.++++++.+...+. ...+. .. ....+...
T Consensus 165 NiGsl~~p~i~~~~~~-------~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (498)
T COG3104 165 NIGSLIAPIITGLLAI-------NYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMI 237 (498)
T ss_pred ehHHHHHHHHHHHHHH-------hhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHH
Confidence 9999999999999987 6889999999999999999999999876654432 22221 11 11111111
Q ss_pred Hhhh--cccccccccccchhh-----------hcccccCCccHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH-
Q psy195 240 IKNK--FKTKKSERTKEHWLD-----------YANDKYDQGTIEDIKTLLRILLLFVPLPIFWALFDQQGSRWTFQANR- 305 (691)
Q Consensus 240 i~~~--~~~~~~~~~~~~~l~-----------~~~~~~~~~~v~~~k~~l~~l~l~~~~~~~~~~~~q~~s~~~~~~~~- 305 (691)
+... ........ ...+. .....+.+.+ +|+||++..+++++..++||+++.|.++.+..|+.+
T Consensus 238 ~~~~~~~~l~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~ 314 (498)
T COG3104 238 LAALLTLLLNQNTF--SGVLLVISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRN 314 (498)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHh
Confidence 1100 00000000 00000 0011233334 889999999999999999999999999999999876
Q ss_pred hcCcccCCceeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q psy195 306 MDGRVFGTSLEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLNRPLRKLTVGGLLAALSFVVSALVEFNIRAHSQIA 385 (691)
Q Consensus 306 ~~~~l~~G~~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~s~l~~i~iG~ll~~~s~li~a~v~~~~~~~~~~~ 385 (691)
.+++. .++++|++++|++|++.++++.|+++++++|+.++++..++..|+++|+.+++++++++........+
T Consensus 315 v~~~~--~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~----- 387 (498)
T COG3104 315 VNRQI--FGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGG----- 387 (498)
T ss_pred hcccc--cceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC-----
Confidence 46664 45999999999999999999999999888887666532288999999999999999988777532210
Q ss_pred CCCCceeEEEEecCCCceeEecCCCcccccccccccccccccccccccccccCCCCCCCcccccccceeeeeccCCccee
Q psy195 386 PQDRHFSLRIYNSMDCDFVFHSPLKNERVLRAMDMLALNNIPINGTQHFAALFEPSTSCPYVLNKTFQSSVLGADGKITE 465 (691)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (691)
T Consensus 388 -------------------------------------------------------------------------------- 387 (498)
T COG3104 388 -------------------------------------------------------------------------------- 387 (498)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchhhhhhcccCcceeeeeccCchhhhhhhhccccccccceeeecCCccccCCCCCCcccceeecCcccceeeecc
Q psy195 466 YYLIRDEKQQAHLKRLGEFHDLRNINSSLKMQILYGSELQGKRITLESDDGFYQDIDLPTGACYTEYIEGIPAGVYEVRS 545 (691)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (691)
T Consensus 388 -------------------------------------------------------------------------------- 387 (498)
T COG3104 388 -------------------------------------------------------------------------------- 387 (498)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhccccccCCceeEEeeccCCCCccccccccccCCCCceeeehhhHHHHHHHHHhHhhcchheeeecccCchhhhH
Q psy195 546 ENKVLKSNMELQDDNVYVLNLNTEASPEHRTARLLKDDSSNKVSMLWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKS 625 (691)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~ 625 (691)
.+++.|++|++|+|++++++|++.+|+|+|.+++.||++|+|
T Consensus 388 --------------------------------------~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s 429 (498)
T COG3104 388 --------------------------------------PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKS 429 (498)
T ss_pred --------------------------------------CCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHH
Confidence 012358999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhc-------CCchHHHHHHHHHHHHHHHHHHHhhhccce
Q psy195 626 AVSACWLLTTAFGNLIVAIVAEAKI-------FENQAYEFLLFASLMVVDMGVFALLAMRYK 680 (691)
Q Consensus 626 ~~~a~~~~~~~~g~~i~~~v~~~~~-------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 680 (691)
..+|.|+++++.|+.+...+++..- ....-..|...+...++..++...++++.+
T Consensus 430 ~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~ 491 (498)
T COG3104 430 FIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLN 491 (498)
T ss_pred HHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9999999999999999888877322 111122455555555555555555555444
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2.8e-38 Score=356.43 Aligned_cols=445 Identities=22% Similarity=0.323 Sum_probs=341.3
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHH
Q psy195 14 SEQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLV--LLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTI 91 (691)
Q Consensus 14 ~~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~--lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i 91 (691)
++..++||.++.+++.++++++++|++.++++.|++++ +|++..+++.+.+.+.++..++++++|+++||++||||++
T Consensus 3 ~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l 82 (475)
T TIGR00924 3 KTFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM 82 (475)
T ss_pred CcccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH
Confidence 34567999999999999999999999999999999987 9999999999999999999999999999999933999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHH
Q psy195 92 VILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGS 171 (691)
Q Consensus 92 ~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~ 171 (691)
.++.+++.++.++++.+..+ ..+++++++.|+|.|+..++.+++++|++| +.++++|++++++++++.|+|+
T Consensus 83 ~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~-~~~~~~r~~~~~~~~~~~niG~ 154 (475)
T TIGR00924 83 VLGGIVLMLGHFMLAMSIYP-------DLIFYGLGTIAVGSGLFKANPSSMVGKLYE-RGDMPRRDGGFTLFYMSINIGS 154 (475)
T ss_pred HHHHHHHHHHHHHHHhcccH-------hHHHHHHHHHHhccccccCCHHHHHHHhcC-CCCcccccceehhHHHHHHHHH
Confidence 99999999998888765322 667789999999999999999999999998 4444568999999999999999
Q ss_pred HHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcccccccCCCCCcchh----H-H--H----HHHHHH
Q psy195 172 LISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYKINKPKGNVALE----V-F--Q----CTIRAI 240 (691)
Q Consensus 172 ~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~----i-~--~----vi~~~i 240 (691)
++||.+++++.+ ..+|+..|.++++.++++++.++..++.+++.++++++... . . . .+....
T Consensus 155 ~ig~~l~g~l~~-------~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (475)
T TIGR00924 155 FISPLLAGVIAE-------NYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVF 227 (475)
T ss_pred HHHHHHHHHHHH-------hcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHH
Confidence 999999999877 46899999998877777766666666555433322221110 0 0 0 000011
Q ss_pred hhhcccccccccc--c--------chhhhcccccCCccHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH-hcCc
Q psy195 241 KNKFKTKKSERTK--E--------HWLDYANDKYDQGTIEDIKTLLRILLLFVPLPIFWALFDQQGSRWTFQANR-MDGR 309 (691)
Q Consensus 241 ~~~~~~~~~~~~~--~--------~~l~~~~~~~~~~~v~~~k~~l~~l~l~~~~~~~~~~~~q~~s~~~~~~~~-~~~~ 309 (691)
+..+........+ . -+..+.. ........++++..+.+++++...++|+.+.|..++++.+..+ ++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~ 306 (475)
T TIGR00924 228 FCAWLMHHVVIANILLMTVTLAVIIFFFRLA-FKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHE 306 (475)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHH-HhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccc
Confidence 1100000000000 0 0000000 0111222344555667888899999999999999998877654 7777
Q ss_pred ccCCceeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCC-CchhHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q psy195 310 VFGTSLEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLN-RPLRKLTVGGLLAALSFVVSALVEFNIRAHSQIAPQD 388 (691)
Q Consensus 310 l~~G~~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~-s~l~~i~iG~ll~~~s~li~a~v~~~~~~~~~~~~~~ 388 (691)
. +++++|+++++++|++.+++++|++++ +++.++||+.. +...|+.+|+++.+++++++++.....
T Consensus 307 ~--~~~~ip~~~~~~~n~~~iil~~p~~~~-~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---------- 373 (475)
T TIGR00924 307 M--LGMSVPVIWFQSLNPFWVVVGSPVLAM-IWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFA---------- 373 (475)
T ss_pred c--cceEECHHHHHhhhHHHHHHHHHHHHH-HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc----------
Confidence 7 788999999999999999999999994 56777776555 788899999999999999888763110
Q ss_pred CceeEEEEecCCCceeEecCCCcccccccccccccccccccccccccccCCCCCCCcccccccceeeeeccCCcceeeee
Q psy195 389 RHFSLRIYNSMDCDFVFHSPLKNERVLRAMDMLALNNIPINGTQHFAALFEPSTSCPYVLNKTFQSSVLGADGKITEYYL 468 (691)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (691)
.
T Consensus 374 -----------------------------------------------~-------------------------------- 374 (475)
T TIGR00924 374 -----------------------------------------------D-------------------------------- 374 (475)
T ss_pred -----------------------------------------------C--------------------------------
Confidence 0
Q ss_pred ecchhhhhhcccCcceeeeeccCchhhhhhhhccccccccceeeecCCccccCCCCCCcccceeecCcccceeeecccch
Q psy195 469 IRDEKQQAHLKRLGEFHDLRNINSSLKMQILYGSELQGKRITLESDDGFYQDIDLPTGACYTEYIEGIPAGVYEVRSENK 548 (691)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (691)
T Consensus 375 -------------------------------------------------------------------------------- 374 (475)
T TIGR00924 375 -------------------------------------------------------------------------------- 374 (475)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccccccCCceeEEeeccCCCCccccccccccCCCCceeeehhhHHHHHHHHHhHhhcchheeeecccCchhhhHHHH
Q psy195 549 VLKSNMELQDDNVYVLNLNTEASPEHRTARLLKDDSSNKVSMLWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKSAVS 628 (691)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~ 628 (691)
++.++|++|++||+++.+++|++.+|++.++.+++||+++||.++
T Consensus 375 -----------------------------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~ 419 (475)
T TIGR00924 375 -----------------------------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQML 419 (475)
T ss_pred -----------------------------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHH
Confidence 001247999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCCchH-HHHHHHHHHHHHHHHHHHhhhcccee
Q psy195 629 ACWLLTTAFGNLIVAIVAEAKIFENQA-YEFLLFASLMVVDMGVFALLAMRYKY 681 (691)
Q Consensus 629 a~~~~~~~~g~~i~~~v~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~ 681 (691)
|+|.++.++|+.+...+........++ ..|...++++++..+++++..++.++
T Consensus 420 g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 473 (475)
T TIGR00924 420 GMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPWLNR 473 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999988877765554444 45667777777777777777776553
No 5
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=4.3e-38 Score=355.77 Aligned_cols=441 Identities=22% Similarity=0.343 Sum_probs=340.1
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHH
Q psy195 15 EQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVIL 94 (691)
Q Consensus 15 ~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig 94 (691)
.+++|||.++.+++.+++++++||++..+++.|+++++|++..+++++.+.+....++.++++|+++||++||||++.++
T Consensus 8 ~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 8 GLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred chhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 34679999999999999999999999999999999999999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q psy195 95 SIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIS 174 (691)
Q Consensus 95 ~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~ig 174 (691)
.+++.++.+++.++..+ . ..++++|+++++|.|+.+|+..++++|+|| +.+ ++|++.++++++++|+|.++|
T Consensus 88 ~~~~~~g~~~~~~~~~~-~-----~ll~~~~~l~~ig~g~~~~~~~~li~~~~p-~~~-~~~~~~~~~~~~~~nig~~~g 159 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLK-P-----DLIFIALGTIAVGNGLFKANPASLLSKCYP-PKD-PRLDGAFTLFYMSINIGSLIS 159 (489)
T ss_pred HHHHHHHHHHHHHhccc-h-----hHHHHHHHHHHhccccccCCHHHHHHHhcC-CCc-hhhhcchhHHHHHHHHHHHHH
Confidence 99999999888875321 0 446689999999999999999999999997 322 367889999999999999999
Q ss_pred HHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhccccccc--CCCCCcc--hhHHHHH------HHHHhhhc
Q psy195 175 TFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYKIN--KPKGNVA--LEVFQCT------IRAIKNKF 244 (691)
Q Consensus 175 p~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~~~--~~~~~~~--~~i~~vi------~~~i~~~~ 244 (691)
|.+++++.+ ..|||++|+++++.++++++.+...++.+++. +|++.+. +...... ........
T Consensus 160 ~~l~g~l~~-------~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~ 232 (489)
T PRK10207 160 LSLAPVIAD-------KFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLM 232 (489)
T ss_pred HHHHHHHHH-------hhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999987 56899999998776666666666665444332 2222211 1111100 00000000
Q ss_pred ccccccccc-c----------chhhhcccccCCccHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH-hcCcccC
Q psy195 245 KTKKSERTK-E----------HWLDYANDKYDQGTIEDIKTLLRILLLFVPLPIFWALFDQQGSRWTFQANR-MDGRVFG 312 (691)
Q Consensus 245 ~~~~~~~~~-~----------~~l~~~~~~~~~~~v~~~k~~l~~l~l~~~~~~~~~~~~q~~s~~~~~~~~-~~~~l~~ 312 (691)
... .... . .+..+ ..+ .+..+++|.+..+.++....++|..+.|..+.++.+..+ .++..
T Consensus 233 -~~~-~~~~~~~~~~~~i~~~~f~~~---~~~-~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~-- 304 (489)
T PRK10207 233 -HNV-EVANLVLIVLSIVVTIIFFRE---AFK-LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEI-- 304 (489)
T ss_pred -hhh-hHHHHHHHHHHHHHHHHHHHH---Hhc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccc--
Confidence 000 0000 0 00000 011 123445667677777888899999999999999988864 66655
Q ss_pred CceeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCC-CchhHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCce
Q psy195 313 TSLEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLN-RPLRKLTVGGLLAALSFVVSALVEFNIRAHSQIAPQDRHF 391 (691)
Q Consensus 313 G~~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~-s~l~~i~iG~ll~~~s~li~a~v~~~~~~~~~~~~~~~~~ 391 (691)
.++++++++++++|++.++++.|+.+ .++|+++||+.. ++..|+.+|+++.++++++++.......
T Consensus 305 ~G~~i~~~~~~~~n~~~iii~~pl~~-~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~------------ 371 (489)
T PRK10207 305 LGFSINPVSFQALNPFWVVVASPILA-GIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFA------------ 371 (489)
T ss_pred cceEECHHHHHhHhHHHHHHHHHHHH-HHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc------------
Confidence 67889999999999999999999998 588999999877 9999999999999999888766542110
Q ss_pred eEEEEecCCCceeEecCCCcccccccccccccccccccccccccccCCCCCCCcccccccceeeeeccCCcceeeeeecc
Q psy195 392 SLRIYNSMDCDFVFHSPLKNERVLRAMDMLALNNIPINGTQHFAALFEPSTSCPYVLNKTFQSSVLGADGKITEYYLIRD 471 (691)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (691)
..
T Consensus 372 -------------------------------------------~~----------------------------------- 373 (489)
T PRK10207 372 -------------------------------------------DA----------------------------------- 373 (489)
T ss_pred -------------------------------------------CC-----------------------------------
Confidence 00
Q ss_pred hhhhhhcccCcceeeeeccCchhhhhhhhccccccccceeeecCCccccCCCCCCcccceeecCcccceeeecccchhhh
Q psy195 472 EKQQAHLKRLGEFHDLRNINSSLKMQILYGSELQGKRITLESDDGFYQDIDLPTGACYTEYIEGIPAGVYEVRSENKVLK 551 (691)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (691)
T Consensus 374 -------------------------------------------------------------------------------- 373 (489)
T PRK10207 374 -------------------------------------------------------------------------------- 373 (489)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCceeEEeeccCCCCccccccccccCCCCceeeehhhHHHHHHHHHhHhhcchheeeecccCchhhhHHHHHHH
Q psy195 552 SNMELQDDNVYVLNLNTEASPEHRTARLLKDDSSNKVSMLWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKSAVSACW 631 (691)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~ 631 (691)
..+.|++|++++|++.|++|.++++++++++++.||++++|.++|+|
T Consensus 374 ---------------------------------~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~ 420 (489)
T PRK10207 374 ---------------------------------QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW 420 (489)
T ss_pred ---------------------------------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHH
Confidence 00136899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhc------CC-----chHHHHHHHHHHHHHHHHHHHhhhccceec
Q psy195 632 LLTTAFGNLIVAIVAEAKI------FE-----NQAYEFLLFASLMVVDMGVFALLAMRYKYV 682 (691)
Q Consensus 632 ~~~~~~g~~i~~~v~~~~~------~~-----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 682 (691)
.++.++|+.++..++.... ++ .-...|..+++..++..++++++.++.++.
T Consensus 421 ~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999877764321 11 124567888888888888888888887754
No 6
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=5.4e-36 Score=335.57 Aligned_cols=337 Identities=23% Similarity=0.381 Sum_probs=257.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
+|||.++.+++.++++++++|++..+++.|+++.+|++..+++.+.+.+.+..+++++++|+++||++||||++.+|.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999977999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
..++.+++...... . ..++++..+.++|.|..+++.+++++|+|| + ++++|+++++++|...|+|++++|.+
T Consensus 86 ~~lg~lll~~~~~~-~-----~~~~l~l~li~iG~G~~~~~~~alv~elfp-~-~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 86 MAIGHVVLGASEIH-P-----SFLYLSLAIIVCGYGLFKSNVSCLLGELYE-P-TDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHHHHHhhcc-h-----hHHHHHHHHHHHhcccccccHHHHHHHHCC-C-CCccccceehHHHHHHHHHHHHHHHH
Confidence 99998766543210 0 335566677778899999999999999997 2 22468999999999999999999999
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcccccccCC-CCCcc--hhHHH----HH-HHH-----Hhhhc
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYKINKP-KGNVA--LEVFQ----CT-IRA-----IKNKF 244 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~~~~~-~~~~~--~~i~~----vi-~~~-----i~~~~ 244 (691)
++++.+ ..||+.+|.++++.++++++.++..++.+.+..+ ++++. ++... .+ ... .....
T Consensus 158 ~g~L~~-------~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (493)
T PRK15462 158 CGYAQE-------EYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVL 230 (493)
T ss_pred HHHHHh-------hhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999977 5689999999888787777777776655433211 11111 11000 00 000 00000
Q ss_pred cccccccccc---------chhhhcccccCCccHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH-hcCcccCCc
Q psy195 245 KTKKSERTKE---------HWLDYANDKYDQGTIEDIKTLLRILLLFVPLPIFWALFDQQGSRWTFQANR-MDGRVFGTS 314 (691)
Q Consensus 245 ~~~~~~~~~~---------~~l~~~~~~~~~~~v~~~k~~l~~l~l~~~~~~~~~~~~q~~s~~~~~~~~-~~~~l~~G~ 314 (691)
...... ... -+.-.. . ......+|+||+...+.++....+||..|.|.++.+.+++.+ .|+++ ++
T Consensus 231 ~~~~~~-~~~~~~~~~~~~~~~~~~-~-~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~--~g 305 (493)
T PRK15462 231 FWKEWS-VYALIVATIIGLGVLAKI-Y-RKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDM--FG 305 (493)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHH-H-HhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchh--cc
Confidence 000000 000 000000 0 011345678899999999999999999999999999999866 78888 89
Q ss_pred eeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCC-CchhHHHHHHHHHHHHHHHHHHHH
Q psy195 315 LEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLN-RPLRKLTVGGLLAALSFVVSALVE 375 (691)
Q Consensus 315 ~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~-s~l~~i~iG~ll~~~s~li~a~v~ 375 (691)
+++|+.++|++|++.++++.|++.. ++..+.|+++. +...|+.+|+++++++++++.+..
T Consensus 306 ~~ip~~~~qslNp~~ii~l~P~~a~-lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~ 366 (493)
T PRK15462 306 YTVPTAMFQSINAFAVMLCGVFLAW-VVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSA 366 (493)
T ss_pred eeeCHHHHHhHhHHHHHHHHHHHHH-HHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999995 44555444334 889999999999999998887655
No 7
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=1.8e-35 Score=335.67 Aligned_cols=446 Identities=24% Similarity=0.352 Sum_probs=329.2
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHH
Q psy195 12 SPSEQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTI 91 (691)
Q Consensus 12 ~~~~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i 91 (691)
+.+.+ ++||.++.+++.++++++++|++..+++.|+++++|++..+++.+.+.+.......++++|+++||++|||+++
T Consensus 13 ~~~~~-~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~ 91 (500)
T PRK09584 13 SLNAF-KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI 91 (500)
T ss_pred Chhhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 34444 68899999999999999999999999999999999999999999998888888888889999999944999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHH
Q psy195 92 VILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGS 171 (691)
Q Consensus 92 ~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~ 171 (691)
.++.++..++..+++++... . ..++++++++|+|.|...++..++++|++| +. +++|++++++++++.|+|+
T Consensus 92 ~~g~~~~~ig~~l~~~~~~~-~-----~~l~~~~~l~gig~g~~~~~~~~l~~~~f~-~~-~~~~~~~~~~~~~~~~iG~ 163 (500)
T PRK09584 92 MLGAIVLAIGYALVAWSGHD-A-----GIVYMGMATIAVGNGLFKANPSSLLSTCYE-KD-DPRLDGAFTMYYMSINIGS 163 (500)
T ss_pred HHHHHHHHHHHHHHHHhccc-H-----HHHHHHHHHHHHhhhcccCCHHHHHHHhcC-CC-chhhhhcchHHHHHHHHHH
Confidence 99999999998877764211 1 556788999999999999999999999997 32 3456678999999999999
Q ss_pred HHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhccccccc--CCCCCcc--hhH----HHHHHHHHhhh
Q psy195 172 LISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYKIN--KPKGNVA--LEV----FQCTIRAIKNK 243 (691)
Q Consensus 172 ~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~~~--~~~~~~~--~~i----~~vi~~~i~~~ 243 (691)
++||.+++++.+ ..||++.|.+.++.++++++.++..++.+++. +|++++. ... ...........
T Consensus 164 ~~gp~i~g~l~~-------~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
T PRK09584 164 FFSMLATPWLAA-------KYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIAT 236 (500)
T ss_pred HHHHHHHHHHHH-------hhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHH
Confidence 999999999987 57899999998877777666555544433332 1222211 111 11111111111
Q ss_pred cccccccccc--cch------hhhcccccCCccHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH-hcCcccCCc
Q psy195 244 FKTKKSERTK--EHW------LDYANDKYDQGTIEDIKTLLRILLLFVPLPIFWALFDQQGSRWTFQANR-MDGRVFGTS 314 (691)
Q Consensus 244 ~~~~~~~~~~--~~~------l~~~~~~~~~~~v~~~k~~l~~l~l~~~~~~~~~~~~q~~s~~~~~~~~-~~~~l~~G~ 314 (691)
......+... ... .......+ +....|++|.+..+.+++..+++|..+.|.++.+..++.+ .++.. ++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~--~g 313 (500)
T PRK09584 237 WLLHNQEIARMALGVVALGIVVIFGKEAF-AMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSI--LG 313 (500)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccc--cc
Confidence 1000000000 000 00000011 1233456677777778888899999999999999998866 56566 67
Q ss_pred eeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEE
Q psy195 315 LEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLNRPLRKLTVGGLLAALSFVVSALVEFNIRAHSQIAPQDRHFSLR 394 (691)
Q Consensus 315 ~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~s~l~~i~iG~ll~~~s~li~a~v~~~~~~~~~~~~~~~~~~~~ 394 (691)
+.+++++++++|++.++++.|+.++ +++.++||. ++.+|+.+|++++++++++++......
T Consensus 314 ~~i~~~~~~s~n~i~iil~~p~~~~-~~~~l~~r~--~~~~~~~~G~~l~~l~f~~l~~~~~~~---------------- 374 (500)
T PRK09584 314 IAVEPEQYQALNPFWIMIGSPILAA-IYNKMGDRL--PMPHKFAIGMVLCSGAFLVLPLGAKFA---------------- 374 (500)
T ss_pred eEECHHHHHHHhHHHHHHHHHHHHH-HHHHhCcCC--CcHHHHHHHHHHHHHHHHHHHHHHHhc----------------
Confidence 8899999999999999999999985 443333331 788999999999999999887655211
Q ss_pred EEecCCCceeEecCCCcccccccccccccccccccccccccccCCCCCCCcccccccceeeeeccCCcceeeeeecchhh
Q psy195 395 IYNSMDCDFVFHSPLKNERVLRAMDMLALNNIPINGTQHFAALFEPSTSCPYVLNKTFQSSVLGADGKITEYYLIRDEKQ 474 (691)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (691)
.
T Consensus 375 -----------------------------------------~-------------------------------------- 375 (500)
T PRK09584 375 -----------------------------------------N-------------------------------------- 375 (500)
T ss_pred -----------------------------------------C--------------------------------------
Confidence 0
Q ss_pred hhhcccCcceeeeeccCchhhhhhhhccccccccceeeecCCccccCCCCCCcccceeecCcccceeeecccchhhhccc
Q psy195 475 QAHLKRLGEFHDLRNINSSLKMQILYGSELQGKRITLESDDGFYQDIDLPTGACYTEYIEGIPAGVYEVRSENKVLKSNM 554 (691)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (691)
T Consensus 376 -------------------------------------------------------------------------------- 375 (500)
T PRK09584 376 -------------------------------------------------------------------------------- 375 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCceeEEeeccCCCCccccccccccCCCCceeeehhhHHHHHHHHHhHhhcchheeeecccCchhhhHHHHHHHHHH
Q psy195 555 ELQDDNVYVLNLNTEASPEHRTARLLKDDSSNKVSMLWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLT 634 (691)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~ 634 (691)
+.+.+|.+|++++|++.|++|++.+|.+++++.+.||+++||+++|+|.++
T Consensus 376 -----------------------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~ 426 (500)
T PRK09584 376 -----------------------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLT 426 (500)
T ss_pred -----------------------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 001246889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhh------cCCc-----hHHHHHHHHHHHHHHHHHHHhhhccceecC
Q psy195 635 TAFGNLIVAIVAEAK------IFEN-----QAYEFLLFASLMVVDMGVFALLAMRYKYVE 683 (691)
Q Consensus 635 ~~~g~~i~~~v~~~~------~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 683 (691)
.++|+++...+.... .+.. -...|..++++.++..+++++..++.++..
T Consensus 427 ~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~~ 486 (500)
T PRK09584 427 TAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRMT 486 (500)
T ss_pred HHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999987776321 1111 134667777777767777777777666543
No 8
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.95 E-value=9.2e-28 Score=262.65 Aligned_cols=280 Identities=34% Similarity=0.620 Sum_probs=199.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCch-h-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHH
Q psy195 88 FLTIVILSIVYLGGNVLLTVTAIDPLNIPK-R-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYF 165 (691)
Q Consensus 88 kk~i~ig~il~~ig~ill~~s~~~~~~~~~-~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~ 165 (691)
+|++++|.+++++|++++++++.+.....+ . ..++++++++++|.|+.+|++.++++||++ +.++++|.++++|+|+
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~-~~~~~~~~~~F~~fY~ 79 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYD-EDDDSRRDSFFNWFYW 79 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSS-TTTTTHHHHHHHHHHH
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhc-ccchhhhhhhHHHHHH
Confidence 589999999999999998888766543221 1 688999999999999999999999999998 6657889999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhccccccc-CCCCCcchh-HHHHHHHHHhhh
Q psy195 166 SINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYKIN-KPKGNVALE-VFQCTIRAIKNK 243 (691)
Q Consensus 166 ~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~~~-~~~~~~~~~-i~~vi~~~i~~~ 243 (691)
++|+|+++++.+.+++.+ +.+|.++|.++++.++++++.++.+++++... +|.+++..+ ...+.....+++
T Consensus 80 ~in~G~~~~~~~~~~i~~-------~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (372)
T PF00854_consen 80 GINIGSLFSPTLVPYIQQ-------NYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVAAFKKR 152 (372)
T ss_dssp HHHHHHHHHHHCCCHHHH-------CS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHHHHHHH
T ss_pred HHhhhhHhhcccchhhcc-------ccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHHHHHHh
Confidence 999999999999999987 68899999999999999999999999988877 666676666 333333333333
Q ss_pred cccccccc----------cc----c--chhh---------hccc-ccCCccHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy195 244 FKTKKSER----------TK----E--HWLD---------YAND-KYDQGTIEDIKTLLRILLLFVPLPIFWALFDQQGS 297 (691)
Q Consensus 244 ~~~~~~~~----------~~----~--~~l~---------~~~~-~~~~~~v~~~k~~l~~l~l~~~~~~~~~~~~q~~s 297 (691)
....+.+. +. . .... .... ...++++++.|...+.++.+.+..+++..+.|...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~~~~~~~~ 232 (372)
T PF00854_consen 153 KLAVPKGSSWLDWALFQYSERSIFGIIVFIRAAVIFFPEIFFWALFCQVQRVEELKALIRFLPIFLFWIFYWQMYSQLNT 232 (372)
T ss_dssp CCCH-HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHTTTSSTTTHHHCCHHHCHHHCCCHHHHHHHHCTCCHH
T ss_pred hcccccchHHHHHhhhhhhhhhhhhhhhhccchhhhhhhhhhcccCCccceeeeeeeeeeccccCeEEEEeeehhhhhhh
Confidence 32221100 00 0 0000 0000 12345667777777777888888888888888777
Q ss_pred hHHHHHHHhcCcccCCc-eeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCC-CchhHHHHHHHHHHHHHHHHHHHH
Q psy195 298 RWTFQANRMDGRVFGTS-LEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLN-RPLRKLTVGGLLAALSFVVSALVE 375 (691)
Q Consensus 298 ~~~~~~~~~~~~l~~G~-~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~-s~l~~i~iG~ll~~~s~li~a~v~ 375 (691)
....+...++... ++ +++|++.++++|++.++++.|+++++++|+++ ++.. +++.|+.+|++++++++++++.++
T Consensus 233 ~~~~~~~~~~~~~--~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~-~~~~~~~~~k~~~G~~~~~~~~~~~~~v~ 309 (372)
T PF00854_consen 233 FFLLQVPQMDRGI--GGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLR-RGIQPSPPQKFGIGMVFAILAMFVAAIVE 309 (372)
T ss_dssp HHHHCGGGTTT-S--S------SGGGTTHHHHHCHHHHHHHHHHCCCTTT-T------HHHHHHH-HHHHHHHHTTTHHH
T ss_pred HHHHhcccccccc--ccccccccchhhhHHHHHHHHHHHHHHHHHhHHhh-hcccchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 7777777777766 66 88999999999999999999999999999888 4444 899999999999999999998888
Q ss_pred Hhh
Q psy195 376 FNI 378 (691)
Q Consensus 376 ~~~ 378 (691)
..+
T Consensus 310 ~~r 312 (372)
T PF00854_consen 310 IRR 312 (372)
T ss_dssp H--
T ss_pred hhh
Confidence 643
No 9
>KOG0569|consensus
Probab=99.89 E-value=5.2e-22 Score=220.23 Aligned_cols=387 Identities=14% Similarity=0.136 Sum_probs=249.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhh
Q psy195 60 TVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPC 138 (691)
Q Consensus 60 g~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~ 138 (691)
+.+++++.+|.++|++++|+++||+ |||..++++.++..++.++...+. .+.. .+++++|++.|+..|.....
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~~~-----e~li~GR~i~Gl~~gl~~~~ 136 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAPSF-----EMLILGRLIVGLACGLSTGL 136 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHhHHHHHH
Confidence 5678899999999999999999998 999999999998888888777663 2222 78999999999999999999
Q ss_pred hhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH-HhhccccccCCCCchhHHHHHHHHHHH--HHHHHHHhh
Q psy195 139 VSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP-IFRHDMQCFGQEACFPLAFGVPALLMF--LAIIVFIIG 215 (691)
Q Consensus 139 ~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~-~l~~~~~~~g~~~~w~~~F~i~~~l~~--l~~l~~~~~ 215 (691)
.+.|+.| .+|.+.||.......++.++|.++|..++. .+..+ ...|++.+.+..+..+ +++..++++
T Consensus 137 ~pmyl~E----~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt------~~~W~~l~~~~~i~~~~~l~~l~~~PE 206 (485)
T KOG0569|consen 137 VPMYLTE----ISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGT------EDLWPYLLAFPLIPALLQLALLPFLPE 206 (485)
T ss_pred HHHHHhh----cChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCC------CcchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999 555999999999999999999998855443 33321 5679988877776444 444556677
Q ss_pred ccccccc-CCCCCcchhHHHHHHHHHhhhcccccccccc-cchh--hhccccc--CCccH-------HHHHHHHHHHHHH
Q psy195 216 KPMYKIN-KPKGNVALEVFQCTIRAIKNKFKTKKSERTK-EHWL--DYANDKY--DQGTI-------EDIKTLLRILLLF 282 (691)
Q Consensus 216 ~~~~~~~-~~~~~~~~~i~~vi~~~i~~~~~~~~~~~~~-~~~l--~~~~~~~--~~~~v-------~~~k~~l~~l~l~ 282 (691)
+|+|.-. +.+.+++++.++ ..+... .+.++ ++.. .+.+... .+... ..++..+..+.+.
T Consensus 207 SPk~Ll~~k~~~~~A~~sl~-------~y~G~~-~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~ 278 (485)
T KOG0569|consen 207 SPKYLLIKKGDEEEARKALK-------FYRGKE-DVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVS 278 (485)
T ss_pred CcchHHHHcCCHHHHHHHHH-------HHhCCC-cchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHH
Confidence 7777544 333333333322 222111 11111 1111 1111111 11111 1133444455666
Q ss_pred HHHHHHHHHHhcccchHHHHHHHhcCcccCCceeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHH
Q psy195 283 VPLPIFWALFDQQGSRWTFQANRMDGRVFGTSLEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLNRPLRKLTVGGL 362 (691)
Q Consensus 283 ~~~~~~~~~~~q~~s~~~~~~~~~~~~l~~G~~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~s~l~~i~iG~l 362 (691)
+.+++.+.....+|++..+...+..... .+..+..+..+|....++.. ++.|.++||.. +..+..
T Consensus 279 ~~qq~sGi~ai~~Yst~i~~~aG~~~~~----a~~an~~~g~v~~~~t~~~~-----~lid~~gRRpL------ll~~~~ 343 (485)
T KOG0569|consen 279 FAQQFSGINAIFFYSTSIFKTAGFTPEE----AQYANLGIGIVNLLSTLVSP-----FLIDRLGRRPL------LLISLS 343 (485)
T ss_pred HHHHhcCcceeHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHHHHHHHHH-----HHHHhcCCcHH------HHHHHH
Confidence 6677777766666666655533322211 01112333444444444444 44445687764 677777
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCCceeEEEEecCCCceeEecCCCcccccccccccccccccccccccccccCCCCC
Q psy195 363 LAALSFVVSALVEFNIRAHSQIAPQDRHFSLRIYNSMDCDFVFHSPLKNERVLRAMDMLALNNIPINGTQHFAALFEPST 442 (691)
Q Consensus 363 l~~~s~li~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (691)
++.++.+++.+.....+...+ --....+.+...+.|.|.
T Consensus 344 ~~~~~~~~~~~~~~l~~~~~~---~~~y~~i~~~~~~~~~f~-------------------------------------- 382 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSNSFGS---WLSYLCIAAIFLFIISFA-------------------------------------- 382 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHhhh--------------------------------------
Confidence 777766666555543311000 000000000000000000
Q ss_pred CCcccccccceeeeeccCCcceeeeeecchhhhhhcccCcceeeeeccCchhhhhhhhccccccccceeeecCCccccCC
Q psy195 443 SCPYVLNKTFQSSVLGADGKITEYYLIRDEKQQAHLKRLGEFHDLRNINSSLKMQILYGSELQGKRITLESDDGFYQDID 522 (691)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (691)
T Consensus 383 -------------------------------------------------------------------------------- 382 (485)
T KOG0569|consen 383 -------------------------------------------------------------------------------- 382 (485)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccceeecCcccceeeecccchhhhccccccCCceeEEeeccCCCCccccccccccCCCCceeeehhhHHHHHHHH
Q psy195 523 LPTGACYTEYIEGIPAGVYEVRSENKVLKSNMELQDDNVYVLNLNTEASPEHRTARLLKDDSSNKVSMLWLFPQYIIITA 602 (691)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~w~~pq~~~~~~ 602 (691)
.+ .-++.|.++
T Consensus 383 ---------------------------------~G-----------------------------~gpi~~fi~------- 393 (485)
T KOG0569|consen 383 ---------------------------------IG-----------------------------PGPIPWFIG------- 393 (485)
T ss_pred ---------------------------------cC-----------------------------CCchhHHHH-------
Confidence 01 126999999
Q ss_pred HhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHHHhhhccceec
Q psy195 603 AEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIVAEAKIFENQAYEFLLFASLMVVDMGVFALLAMRYKYV 682 (691)
Q Consensus 603 ~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 682 (691)
+|.+ |++-|+.+++...+.+|++|+++....+....-.+.+.|++|++.+++..++.+...+|+|+|
T Consensus 394 aELf-------------~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 394 AELF-------------PQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHhC-------------CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 9999 999999999999999999999998888776554556889999999999999999999999999
Q ss_pred CCCccc
Q psy195 683 EEDEDE 688 (691)
Q Consensus 683 ~~~~~~ 688 (691)
+.+|+.
T Consensus 461 ~~~eI~ 466 (485)
T KOG0569|consen 461 TPYEII 466 (485)
T ss_pred CHHHHH
Confidence 977653
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.88 E-value=2.9e-19 Score=196.37 Aligned_cols=177 Identities=15% Similarity=0.061 Sum_probs=145.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHH
Q psy195 17 PKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSI 96 (691)
Q Consensus 17 ~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~i 96 (691)
.+..|.+..+.+..+...++.....+.++.++.+++|.|..+.|++.+++.++..++.++.|+++||+ ||||++..+.+
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~ 89 (399)
T PRK05122 11 LRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLC 89 (399)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHH
Confidence 34567777788888888888888888999999999999999999999999999999999999999998 99999999988
Q ss_pred HHHHHHHHHHHhhc-CCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q psy195 97 VYLGGNVLLTVTAI-DPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIST 175 (691)
Q Consensus 97 l~~ig~ill~~s~~-~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp 175 (691)
++.++.+.+..+.. .+........++++|++.|+|.+...+...++..|++| +++|+++.++...+.++|..+|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~g~ 165 (399)
T PRK05122 90 GCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVG----ALHTGRVISWNGIATYGALAIGA 165 (399)
T ss_pred HHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcC----hhhhccchhhhhhhhhHHHHHHH
Confidence 88777665544321 10000001578899999999999999999999999887 88899999999999999999999
Q ss_pred HHHHHhhccccccCCCCchhHHHHHHHHHH
Q psy195 176 FITPIFRHDMQCFGQEACFPLAFGVPALLM 205 (691)
Q Consensus 176 ~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~ 205 (691)
.+++.+.+ ..+|+..+.+..++.
T Consensus 166 ~l~~~l~~-------~~g~~~~~~~~~~~~ 188 (399)
T PRK05122 166 PLGVLLYH-------WGGLAGLGLLIMLLA 188 (399)
T ss_pred HHHHHHHH-------cccHHHHHHHHHHHH
Confidence 99998876 467998777655443
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.87 E-value=3.3e-19 Score=196.96 Aligned_cols=176 Identities=19% Similarity=0.258 Sum_probs=151.8
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHH
Q psy195 14 SEQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVI 93 (691)
Q Consensus 14 ~~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~i 93 (691)
++.+|.+| ++++...++...+++.+.+.++.|+++++|++..+.|.+.+...+...+..+++|+++||+ |||+++.+
T Consensus 5 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~ 81 (400)
T PRK11646 5 SQARNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVT 81 (400)
T ss_pred cccccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHH
Confidence 44567777 5666778888999999999999999999999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHH
Q psy195 94 LSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLI 173 (691)
Q Consensus 94 g~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~i 173 (691)
+.++..++.+++.....+ +.++++|++.|++.+...+...+++.|.+| +++|+++.++.+...++|..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~-------~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~~~~~~~~g~~i 150 (400)
T PRK11646 82 GMLMRAAGFATMAIAHEP-------WLLWLSCILSGLGGTLFDPPRTALVIKLIR----PHQRGRFFSLLMMQDSAGAVI 150 (400)
T ss_pred HHHHHHHHHHHHHHhccH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHH
Confidence 999988888877664322 678899999999999999999999999877 889999999999999999999
Q ss_pred HHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 174 STFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 174 gp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
||.+++++.. .+|+..|++.++..++..++
T Consensus 151 g~~l~g~l~~--------~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 151 GALLGSWLLQ--------YDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHH--------hhHHHHHHHHHHHHHHHHHH
Confidence 9999998864 46999988877655544433
No 12
>KOG0254|consensus
Probab=99.87 E-value=7.9e-21 Score=216.75 Aligned_cols=279 Identities=16% Similarity=0.164 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchh
Q psy195 57 KTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIK 136 (691)
Q Consensus 57 ~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~ 136 (691)
.+.+++.+...+++.++.+++|.++|++ |||++++++.+++.+|.++.+.+.. . .+++++|++.|+|.|+..
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~~--~-----~~l~~GR~l~G~g~G~~~ 160 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAPS--W-----YQLIVGRILTGLGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhhh--H-----HHHHHHHHHhccchhhhh
Confidence 3558999999999999999999999998 9999999999999999999988742 2 899999999999999999
Q ss_pred hhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHH--HHHh
Q psy195 137 PCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAII--VFII 214 (691)
Q Consensus 137 ~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l--~~~~ 214 (691)
..+|.+++| .++++.||...+..++..++|..++..++....+. ..+||..+.+..+..++.++ .+.+
T Consensus 161 ~~~piy~sE----iap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~------~~~Wr~~~~~~~i~~~~~~~~~~~~p 230 (513)
T KOG0254|consen 161 VLAPVYISE----IAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV------YAGWRIPLGLALIPAVILALGMLFLP 230 (513)
T ss_pred hcchhhHhh----cCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC------CccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999 45599999999999999999999996666554331 13799777765554333333 3333
Q ss_pred hcccccccCCCCCcchhHHHHHHHHHhhhcccccccccc--cchh-hhcccc--------cCCcc-HHHHHHHHHHHHHH
Q psy195 215 GKPMYKINKPKGNVALEVFQCTIRAIKNKFKTKKSERTK--EHWL-DYANDK--------YDQGT-IEDIKTLLRILLLF 282 (691)
Q Consensus 215 ~~~~~~~~~~~~~~~~~i~~vi~~~i~~~~~~~~~~~~~--~~~l-~~~~~~--------~~~~~-v~~~k~~l~~l~l~ 282 (691)
.+|++..++.+..+..+.++ +.+...+.+.+. .+.. +..... +.+.. ..-.|+....+.+.
T Consensus 231 esp~~L~~~g~~~~a~~~l~-------~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~ 303 (513)
T KOG0254|consen 231 ESPRWLIEKGRLEEAKRSLK-------RLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQ 303 (513)
T ss_pred CChHHHHHcCChHHHHHHHH-------HHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHH
Confidence 45554433222222222111 111101111111 0000 000000 00000 12345666677888
Q ss_pred HHHHHHHHHHhcccchHHHHHHHhcCc-ccCCceeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHH
Q psy195 283 VPLPIFWALFDQQGSRWTFQANRMDGR-VFGTSLEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLNRPLRKLTVGG 361 (691)
Q Consensus 283 ~~~~~~~~~~~q~~s~~~~~~~~~~~~-l~~G~~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~s~l~~i~iG~ 361 (691)
.+++..+.+...+|+....+..+.... . .....+..++.+..++.. ++.|.++||.. +..|.
T Consensus 304 ~fqq~tG~~~~~~Y~~~if~~~g~~~~~~------~~~~~~~~v~~~~t~~~~-----~lvd~~gRr~l------ll~s~ 366 (513)
T KOG0254|consen 304 LFQQLTGINYVFYYSTTIFKSAGLKSDTF------LASIILGVVNFLGTLVAT-----YLVDRFGRRKL------LLFGA 366 (513)
T ss_pred HHHHHhCCceEEeehHHHHHhcCCCCchH------HHHHHHHHHHHHHHHHHH-----HHHHHhccHHH------HHHhH
Confidence 888888888888888777655443321 1 112233334444444433 44455687765 88899
Q ss_pred HHHHHHHHHHHHHHHh
Q psy195 362 LLAALSFVVSALVEFN 377 (691)
Q Consensus 362 ll~~~s~li~a~v~~~ 377 (691)
..+++++++.+..-..
T Consensus 367 ~~m~~~~~~~~~~~~~ 382 (513)
T KOG0254|consen 367 AGMSICLVILAVVGVF 382 (513)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999888877653
No 13
>PRK12382 putative transporter; Provisional
Probab=99.86 E-value=1e-18 Score=191.78 Aligned_cols=173 Identities=13% Similarity=0.072 Sum_probs=138.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
...+.++.+.+..++...+.....+.+|.|+.+++|+|..+.|++.+.+.++..++++++|+++||+ ||||++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~ 90 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLA 90 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHH
Confidence 3456666666777777777777778899999999999999999999999999999999999999998 999999998887
Q ss_pred HHHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 98 ~~ig~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
..++.+...... .+.....+...++++|++.|+|.+...+...+++.|.+| +++|++++++...+.+.|..++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~----~~~r~~a~~~~~~~~~~g~~~g~~ 166 (392)
T PRK12382 91 CGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVG----PKHSGKVMSWNGMAMYGALAAGAP 166 (392)
T ss_pred HHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----ccccchhhhHHHHHHHHHHHHHHH
Confidence 766654332221 110000011678899999999999988888889999887 889999999999999999999999
Q ss_pred HHHHhhccccccCCCCchhHHHHHHH
Q psy195 177 ITPIFRHDMQCFGQEACFPLAFGVPA 202 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~w~~~F~i~~ 202 (691)
+++++.+ ..+|+..+.+..
T Consensus 167 ~~~~l~~-------~~g~~~~~~~~~ 185 (392)
T PRK12382 167 LGLLLHS-------HFGFAALALTTM 185 (392)
T ss_pred HHHHHHh-------ccChHHHHHHHH
Confidence 9988866 467887665543
No 14
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.85 E-value=6.3e-19 Score=198.33 Aligned_cols=153 Identities=11% Similarity=0.101 Sum_probs=119.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhc--CCCC-Cc-hh-HHHHHHHHH
Q psy195 53 LYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAI--DPLN-IP-KR-TFTLVGLLL 127 (691)
Q Consensus 53 g~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~--~~~~-~~-~~-~~l~i~~~l 127 (691)
+++..+++++.+++.++..++++++|+++||+ ||||++.++.+++.++.++.+.+.. .... .. .. ..++++|++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 89999999999999999999999999999998 9999999999998888777665321 0000 00 11 567899999
Q ss_pred HHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cccCCCCchhHHHHHHHHHHH
Q psy195 128 IAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDM-QCFGQEACFPLAFGVPALLMF 206 (691)
Q Consensus 128 ~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~-~~~g~~~~w~~~F~i~~~l~~ 206 (691)
.|++.|...+..+++++|++| +++|++.++....+..+|.++++.++..+.... ...-...+||+.|.+.++..+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~----~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~ 205 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAP----AHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPAL 205 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCC----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHH
Confidence 999999999999999999887 889999999999999999999888776553210 000014579999988766555
Q ss_pred HHHH
Q psy195 207 LAII 210 (691)
Q Consensus 207 l~~l 210 (691)
+.++
T Consensus 206 ~~~~ 209 (479)
T PRK10077 206 LFLM 209 (479)
T ss_pred HHHH
Confidence 4443
No 15
>PRK03545 putative arabinose transporter; Provisional
Probab=99.85 E-value=3.4e-18 Score=187.69 Aligned_cols=170 Identities=11% Similarity=0.084 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.++.+.+..++.....+...+.+| .+.+++|.+..+.|++.+.+.++..++.++.|+++||+ ||||++..+.++..++
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIAS 87 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHH
Confidence 344444444443333333333344 45678999999999999999999999999999999998 9999999999998888
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.++...+.. . +.++++|+++|++.+...+...++++|++| +++|++++++...+.++|.+++|.+++.+
T Consensus 88 ~~~~~~~~~--~-----~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~----~~~r~~~~g~~~~~~~~g~~ig~~l~~~l 156 (390)
T PRK03545 88 HVLSALAWN--F-----TVLLISRIGIAFAHAIFWSITASLAIRVAP----AGKKAQALSLLATGTALAMVLGLPLGRVI 156 (390)
T ss_pred HHHHHHhcc--H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----hhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 887776532 2 788999999999999988999999999887 88999999999999999999999999988
Q ss_pred hccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 182 RHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 182 ~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
.+ ..+||+.|.+.+++.++..+.
T Consensus 157 ~~-------~~gw~~~f~~~~~~~~l~~~~ 179 (390)
T PRK03545 157 GQ-------YLGWRTTFLAIGGGALITLLL 179 (390)
T ss_pred HH-------HhcHHHHHHHHHHHHHHHHHH
Confidence 76 468999999877665554433
No 16
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.85 E-value=1.7e-18 Score=191.90 Aligned_cols=172 Identities=14% Similarity=0.101 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.+..++...++..++.......+|.+. ++++.+..++|++.+.+.++..++.+++|+++||+ |||+++.++.++..++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~ 95 (417)
T PRK10489 18 AFRAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLG 95 (417)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHH
Confidence 344444455566666555555666665 45788999999999999999999999999999998 9999999888777776
Q ss_pred HHHHHHhh---cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 102 NVLLTVTA---IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 102 ~ill~~s~---~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
.+++.... .+++ +.+++.|++.|++.|...++..+++.|.+| +++|+++.++.+...++|..+||.++
T Consensus 96 ~~~~~~~~~~~~~~~-----~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~g~~l~ 166 (417)
T PRK10489 96 FIGLALNAFLPEPSL-----LAIYLLGLWDGFFGSLGVTALLAATPALVG----RENLMQAGAITMLTVRLGSVISPALG 166 (417)
T ss_pred HHHHHHHHHcCCCcH-----HHHHHHHHHHHHHHHHHHHHHhhhhhhccC----HHHHHHHHHHHHHHHhHHHHhHHHHH
Confidence 66554321 1111 667789999999998888888899999776 78899999999999999999999999
Q ss_pred HHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
+.+.+ ..+|++.|.+.++..+++.+.
T Consensus 167 g~l~~-------~~~~~~~~~~~~~~~~~~~~~ 192 (417)
T PRK10489 167 GLLIA-------AGGVAWNYGLAAAGTFITLLP 192 (417)
T ss_pred HHHHH-------HHhhHHHHHHHHHHHHHHHHH
Confidence 98876 356888888766655544433
No 17
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.84 E-value=1.4e-17 Score=183.67 Aligned_cols=173 Identities=12% Similarity=0.035 Sum_probs=134.5
Q ss_pred chHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERF---CYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSI 96 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~---~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~i 96 (691)
++..+..+...+.+.. +.....+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||++.++.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~ 86 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVA 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 4444444444444433 33334444554 4578999999999999999999999999999999998 99999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 97 VYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 97 l~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
+..++.++...+.. . +.+++.|++.|++.+...+...+++.|.+| +++|.+..++......+|..++|.
T Consensus 87 ~~~~~~~~~~~~~~--~-----~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~ 155 (406)
T PRK15402 87 FFILTCLAILLAQS--I-----EQFTLLRFLQGIGLCFIGAVGYAAIQESFE----EADAIKITALMANVALLAPLLGPL 155 (406)
T ss_pred HHHHHHHHHHHHcc--H-----HHHHHHHHHHHhHhhhHHHHHHHHHHHHhC----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777665432 2 678899999999999888888999999887 778888888888888889999999
Q ss_pred HHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 177 ITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
+++.+.+ ..+|+..|.+.+++.++..+..
T Consensus 156 i~~~l~~-------~~~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 156 VGAALIH-------VLPWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred HHHHHHH-------ccCccHHHHHHHHHHHHHHHHH
Confidence 9988876 4679999988776655554433
No 18
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.84 E-value=1.8e-18 Score=196.66 Aligned_cols=160 Identities=14% Similarity=0.111 Sum_probs=121.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCch-hHHHHHHHHHHHHH
Q psy195 53 LYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPK-RTFTLVGLLLIAVG 131 (691)
Q Consensus 53 g~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~-~~~l~i~~~l~gig 131 (691)
+.+..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++.+.+... .... ...++++|++.|++
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~r~l~G~~ 128 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGS--SPKSVMATLCFWRFWLGVG 128 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCc--ccchHHHHHHHHHHHHHHH
Confidence 45667789999999999999999999999998 99999999999988888777664210 0000 16789999999999
Q ss_pred hhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-c---------------CCCCchh
Q psy195 132 TGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQC-F---------------GQEACFP 195 (691)
Q Consensus 132 ~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~-~---------------g~~~~w~ 195 (691)
.|+..+..+.+++|.+| +++|+++.++.+....+|.++++.++..+...... . ....+||
T Consensus 129 ~g~~~~~~~~~~~e~~p----~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR 204 (502)
T TIGR00887 129 IGGDYPLSAIITSEFAT----KKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR 204 (502)
T ss_pred HhhhhHHHHHHHHHhcC----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence 99999999999999888 99999999999999999999999887654321000 0 0013699
Q ss_pred HHHHHHHHHHHHHHH--HHHhhcccc
Q psy195 196 LAFGVPALLMFLAII--VFIIGKPMY 219 (691)
Q Consensus 196 ~~F~i~~~l~~l~~l--~~~~~~~~~ 219 (691)
..|.+.++..++..+ .+++++|++
T Consensus 205 ~~~~~~~ip~~i~~~~~~~lpESpr~ 230 (502)
T TIGR00887 205 ILIGFGAVPALLALYFRLTIPETPRY 230 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 998776654443333 234455554
No 19
>PRK10054 putative transporter; Provisional
Probab=99.84 E-value=3.3e-18 Score=188.77 Aligned_cols=174 Identities=14% Similarity=0.183 Sum_probs=149.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
+.+|+++.+.+..++...+++...++++.|+++++|++..++|++.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~ 82 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITA 82 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHH
Confidence 3577888888889999999999999999999999999999999999999999999999999999997 999999999988
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
..++.+++.+.... +.+++++.+.+.+.+...++..++.+|.+| +++|++.+++.+...++|.++||.+
T Consensus 83 ~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~lg~~igp~l 151 (395)
T PRK10054 83 FASGFIAIPLVNNV-------TLVVLFFALINCAYSVFSTVLKAWFADNLS----STSKTKIFSLNYTMLNIGWTVGPPL 151 (395)
T ss_pred HHHHHHHHHHHhHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777665321 566677888888888888889999999776 8889999999999999999999999
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
++++.. .+|+..|.+.+++.++++++
T Consensus 152 ~~~l~~--------~g~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 152 GTLLVM--------QSINLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHH--------hccCcHHHHHHHHHHHHHHH
Confidence 998764 36898888877666655433
No 20
>PRK10504 putative transporter; Provisional
Probab=99.84 E-value=1.3e-17 Score=187.75 Aligned_cols=180 Identities=12% Similarity=0.095 Sum_probs=149.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
+.++.++.+.+..++..+..+.+.+.+|.+.. ++|.+..+.+++.+.+.++..++.+++|+++||+ ||||++..+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~ 84 (471)
T PRK10504 7 SVRWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVL 84 (471)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHH
Confidence 34567777888788877787777787888775 6999999999999999999999999999999998 999999998888
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
..++.++...+.. . ..++++|++.|+|.|...+...+++.|.+| +++|++..++.....++|..+||.+
T Consensus 85 ~~~~~~~~~~~~~--~-----~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~g~~~ 153 (471)
T PRK10504 85 FTLGSLFCALSGT--L-----NELLLARVLQGVGGAMMVPVGRLTVMKIVP----REQYMAAMTFVTLPGQVGPLLGPAL 153 (471)
T ss_pred HHHHHHHHHHhCC--H-----HHHHHHHHHHHhhhHHHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 8877776655422 2 678899999999999999999999999887 8899999999999999999999999
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKP 217 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~ 217 (691)
++.+.+ ..+|++.|.+......++.+......+
T Consensus 154 ~g~l~~-------~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 154 GGLLVE-------YASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHh-------hccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 998877 467999998877655555544444333
No 21
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.83 E-value=1e-17 Score=196.72 Aligned_cols=157 Identities=17% Similarity=0.067 Sum_probs=127.5
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH
Q psy195 41 RTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTF 120 (691)
Q Consensus 41 ~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~ 120 (691)
...+...+.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++..++.++.+++.. . +.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~s--~-----~~ 257 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQG--Y-----GF 257 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhh--H-----HH
Confidence 44455667778999999999999999999999999999999998 9999999999888888877766522 2 78
Q ss_pred HHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc---cC---CCCch
Q psy195 121 TLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQC---FG---QEACF 194 (691)
Q Consensus 121 l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~---~g---~~~~w 194 (691)
++++|++.|+|.|+..+..+++++|.+| ++.|+..+++...+..+|.++++.++..+....++ .+ ...+|
T Consensus 258 llv~R~l~G~g~g~~~p~~~~~isE~~p----~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gW 333 (742)
T TIGR01299 258 FLFCRLLSGFGIGGAIPIVFSYFAEFLA----QEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSW 333 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccH
Confidence 8899999999999999999999999887 89999999999999999999999877655431110 00 02469
Q ss_pred hHHHHHHHHHHHHHH
Q psy195 195 PLAFGVPALLMFLAI 209 (691)
Q Consensus 195 ~~~F~i~~~l~~l~~ 209 (691)
|+.|++.++..++++
T Consensus 334 R~l~~i~~lp~ll~l 348 (742)
T TIGR01299 334 RVFVIVCAFPCVFAI 348 (742)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988877665544443
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.83 E-value=3.2e-17 Score=180.55 Aligned_cols=168 Identities=17% Similarity=0.127 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.+...+...++..+..+......| .+.+++|+++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 93 (406)
T PRK11551 16 TIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALFGLF 93 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHH
Confidence 333444444444444444433344 45577999999999999999999999999999999998 9999999998888777
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.++...... . ..++++|++.|++.+...+...++++|.+| +++|+++.++.+.+.++|..+++.+++.+
T Consensus 94 ~~~~~~~~~--~-----~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 162 (406)
T PRK11551 94 SLATAQAWD--F-----PSLLVARLLTGVGLGGALPNLIALTSEAVG----PRLRGTAVSLMYCGVPFGGALASVIGVLA 162 (406)
T ss_pred HHHHHHhcc--H-----HHHHHHHHHHHhhHHHHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766665422 2 778899999999999999999999999887 88999999999999999999999988777
Q ss_pred hccccccCCCCchhHHHHHHHHHHHHHH
Q psy195 182 RHDMQCFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 182 ~~~~~~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
.+ ..+|+..|.+.+++.++..
T Consensus 163 ~~-------~~~~~~~~~~~~~~~~~~~ 183 (406)
T PRK11551 163 AG-------DAAWRHIFYVGGVGPLLLV 183 (406)
T ss_pred cc-------ccCHHHHHHHHHHHHHHHH
Confidence 65 4679998888665544443
No 23
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.83 E-value=1.8e-17 Score=178.06 Aligned_cols=169 Identities=12% Similarity=0.032 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHH
Q psy195 26 IVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLL 105 (691)
Q Consensus 26 l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill 105 (691)
++...++..++.......+|.|.. +++.+..+.+++.+++.++..++.++.|+++||+ ||||++.++.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 445566666666666667777775 5899999999999999999999999999999998 99999999988877777666
Q ss_pred HHhhc-C--CCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 106 TVTAI-D--PLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 106 ~~s~~-~--~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
..... + +. +.++++|++.|++.+...+...++++|.+| +++|++.+++.+.+.++|.++||.+++.+.
T Consensus 82 ~~~~~~~~~~~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 82 PFVALLGGLNI-----WQVYVLAGILAIAQAFFTPAYQAMLPDLVP----EEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHcCCCcH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----HHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 55431 1 12 778899999999999999999999999887 789999999999999999999999999887
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 183 HDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 183 ~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
+ ..+|+..|.+.++..+++.+..
T Consensus 153 ~-------~~g~~~~~~~~~~~~~~~~~~~ 175 (365)
T TIGR00900 153 A-------TLGIKWAIWVDAVGFAISALLI 175 (365)
T ss_pred H-------HhhHHHHHHHHHHHHHHHHHHH
Confidence 6 4679998888766555544433
No 24
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.83 E-value=2.1e-17 Score=178.37 Aligned_cols=152 Identities=12% Similarity=0.112 Sum_probs=131.2
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHH
Q psy195 43 VLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTL 122 (691)
Q Consensus 43 ~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~ 122 (691)
....++.+++|++..+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++.++.+.+.. . +.++
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~ 86 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAGA--Y-----VSLY 86 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHcC--H-----HHHH
Confidence 344457788999999999999999999999999999999998 9999999999988888887776532 2 7889
Q ss_pred HHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHH
Q psy195 123 VGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPA 202 (691)
Q Consensus 123 i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~ 202 (691)
++|++.|++.|...+...++++|.+| +++|++.+++.....++|.++++.+++.+.+ ..+|+..|.+.+
T Consensus 87 ~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~~~~~~~ 155 (399)
T TIGR00893 87 ILRVLLGAAEAPFFPGIILIVASWFP----ASERATAVSIFNSAQGLGGIIGGPLVGWILI-------HFSWQWAFIIEG 155 (399)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHhCC----HHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-------hCCchHHHHHHH
Confidence 99999999999999999999999887 8899999999999999999999999998766 467999998877
Q ss_pred HHHHHHHHHHH
Q psy195 203 LLMFLAIIVFI 213 (691)
Q Consensus 203 ~l~~l~~l~~~ 213 (691)
++.++..++..
T Consensus 156 ~~~~~~~~~~~ 166 (399)
T TIGR00893 156 VLGIIWGVLWL 166 (399)
T ss_pred HHHHHHHHHhh
Confidence 66555544433
No 25
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.83 E-value=7.7e-18 Score=187.08 Aligned_cols=140 Identities=18% Similarity=0.328 Sum_probs=117.7
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhHHHHHHHHHHHHHh
Q psy195 54 YDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAI-DPLNIPKRTFTLVGLLLIAVGT 132 (691)
Q Consensus 54 ~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~-~~~~~~~~~~l~i~~~l~gig~ 132 (691)
.+..+.+++.+++.++..++.+++|+++||+ |||+++.++.++..++.++...... .+. +.++++|++.|+|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~r~l~G~~~ 141 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFALSV-----EMLIVGRVLLGIGV 141 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccccch-----HHHHHHHHHHHhhh
Confidence 3389999999999999999999999999998 9999999999998888888765422 111 47899999999999
Q ss_pred hchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH---HHhhccccccCCCCchhHHHHHHHHHHHHHH
Q psy195 133 GGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT---PIFRHDMQCFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 133 G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~---~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
|...+...++++|.+| +++|+++.++.+.+.++|.++++.++ ..... ..+||+.|.+.++..++.+
T Consensus 142 ~~~~~~~~~~i~~~~~----~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-------~~~w~~~f~~~~~~~~~~~ 210 (481)
T TIGR00879 142 GIASALVPMYLSEIAP----KALRGALTSLYQLAITFGILVAYGFGSGKVSLNN-------TLGWRIPLGLQLIPAGLLF 210 (481)
T ss_pred hHHHhHHHHHHHccCC----hhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC-------CccHHHHHHHHHHHHHHHH
Confidence 9999999999999887 88999999999999999999999988 44333 4689999988655444443
Q ss_pred H
Q psy195 210 I 210 (691)
Q Consensus 210 l 210 (691)
+
T Consensus 211 ~ 211 (481)
T TIGR00879 211 L 211 (481)
T ss_pred H
Confidence 3
No 26
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.82 E-value=8.3e-17 Score=174.95 Aligned_cols=175 Identities=10% Similarity=0.078 Sum_probs=140.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
++..+.+....+....+.....+.+|. +.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 344444444444445555555555554 4567999999999999999999999999999999998 99999999998888
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.++...... . +.++++|++.|++.+...+...+++.|.+| +++|++.+++.+...++|..+++.+++
T Consensus 82 ~~~~~~~~~~~--~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~g~~~~~ 150 (385)
T TIGR00710 82 LSSLGLALSNN--I-----ETLLVLRFVQAFGASAGSVISQALVRDIYP----GEELSRIYSILMPVLALAPAVAPLLGG 150 (385)
T ss_pred HHHHHHHHHcc--H-----HHHHHHHHHHHcchhHHHHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887766532 2 778899999999999999999999999887 889999999999999999999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
.+.+ ..+|+..|.+.++..++..+....
T Consensus 151 ~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 151 YILV-------WLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHH-------HcCHHHHHHHHHHHHHHHHHHHHH
Confidence 8876 467999888877665555444433
No 27
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.82 E-value=1.1e-16 Score=176.50 Aligned_cols=177 Identities=14% Similarity=0.153 Sum_probs=144.9
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHH
Q psy195 13 PSEQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIV 92 (691)
Q Consensus 13 ~~~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ 92 (691)
.+..++.|+....+.+..++.....|...+.+|.+ .+++|+++.+.++..+.+.++..++.++.|+++||+ |||+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~ 89 (394)
T PRK10213 12 DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVI 89 (394)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHH
Confidence 34555666665555555545555555555566654 567999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHH
Q psy195 93 ILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSL 172 (691)
Q Consensus 93 ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~ 172 (691)
.+.++..++.++...+. +. +.+++.|++.|++.|...+...+++.|++| +++|+++.++...+.++|.+
T Consensus 90 ~~~~~~~~~~~~~~~~~--~~-----~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~----~~~~~~a~~~~~~~~~~g~~ 158 (394)
T PRK10213 90 LFAVLLTLSCLLVSFAN--SF-----SLLLIGRACLGLALGGFWAMSASLTMRLVP----PRTVPKALSVIFGAVSIALV 158 (394)
T ss_pred HHHHHHHHHHHHHHHHC--hH-----HHHHHHHHHHHHhhHHHHHHHHHHHHHHcC----HhHHHHHHHHHHHHHHHHHH
Confidence 99999988887776642 22 789999999999999999999999999887 88999999999999999999
Q ss_pred HHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHH
Q psy195 173 ISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 173 igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
++|.+++++.+ ..+|+..|.+.+++.++..
T Consensus 159 ig~~l~~~l~~-------~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 159 IAAPLGSFLGE-------LIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHh-------hcCHHHHHHHHHHHHHHHH
Confidence 99999999876 4689999988766554443
No 28
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.82 E-value=3e-17 Score=174.65 Aligned_cols=167 Identities=17% Similarity=0.301 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHH
Q psy195 25 FIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVL 104 (691)
Q Consensus 25 ~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~il 104 (691)
.+....++...+++...+.++.|.. ++|.+..+.+.+.+...++..++.++.|+++||+ |||+.+.++.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 3445566667777777777777764 5799999999999999999999999999999998 9999999999999888887
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy195 105 LTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHD 184 (691)
Q Consensus 105 l~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~ 184 (691)
...... . +.++++|++.|++.+...+...++..|.+| +++|++.+++.+...++|..++|.+++.+.+
T Consensus 81 ~~~~~~--~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~- 148 (352)
T cd06174 81 LAFASS--L-----WLLLVGRFLLGLGGGALYPAAAALIAEWFP----PKERGRALGLFSAGFGLGALLGPLLGGLLAE- 148 (352)
T ss_pred HHHhcc--H-----HHHHHHHHHHHcccccccHhHHHHHHHhCC----ccchhhhhhHHHHHHHHHHHHHHHHHHHHHH-
Confidence 776521 2 778899999999999999999999999887 7899999999999999999999999998876
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 185 MQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 185 ~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
..+|+..|.+.++..++..+.
T Consensus 149 ------~~~~~~~~~~~~~~~~~~~~~ 169 (352)
T cd06174 149 ------SLGWRWLFLILAILGLLLALL 169 (352)
T ss_pred ------HhhHHHHHHHHHHHHHHHHHH
Confidence 456998888877665555444
No 29
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.82 E-value=4.9e-17 Score=178.72 Aligned_cols=173 Identities=15% Similarity=0.128 Sum_probs=139.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHH
Q psy195 19 YPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKT-----ATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVI 93 (691)
Q Consensus 19 ~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~-----ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~i 93 (691)
..|.+..+++..++..+++....+++|.|++ ++|++..+ +|.+.+++.++..++.++.|+++||+ |||+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~ 89 (408)
T PRK09874 12 WKRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLR 89 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHH
Confidence 3556667777777888888878888999886 58888654 48888999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHH
Q psy195 94 LSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLI 173 (691)
Q Consensus 94 g~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~i 173 (691)
+.++..++.+++..... . +.++++|++.|++.+. .+...+++.+++| +++|++..++...+.++|.++
T Consensus 90 ~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~ 157 (408)
T PRK09874 90 SALGMGIVMVLMGLAQN--I-----WQFLILRALLGLLGGF-VPNANALIATQVP----RNKSGWALGTLSTGGVSGALL 157 (408)
T ss_pred HHHHHHHHHHHHHHHhh--H-----HHHHHHHHHHHHhhhh-HHhHHHHHHHhcC----HhhhhHHHHHHHHHHHHHHHH
Confidence 98888887777665422 1 7788899999988654 5677788889877 888999999999999999999
Q ss_pred HHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 174 STFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 174 gp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
+|.+++.+.+ ..+|+..|.+.+++.++..+..
T Consensus 158 ~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~ 189 (408)
T PRK09874 158 GPLAGGLLAD-------SYGLRPVFFITASVLFLCFLVT 189 (408)
T ss_pred HHHHHHHHHH-------HhCHHHHHHHHHHHHHHHHHHH
Confidence 9999998876 4679999888777655554433
No 30
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.80 E-value=2.7e-16 Score=172.30 Aligned_cols=153 Identities=12% Similarity=0.104 Sum_probs=134.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
.++|.++.+++..++...+...+.+.+|.|+. ++|.|..++|++.+.+.++..+++++.|+++||+ |||+++..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~ 80 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLI 80 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHH
Confidence 45677888888888888888888888998886 5899999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
..++.++...+.. . +.++++|++.|++.|...+...+...+..+ +++|++.++++..+.++|..+||.+
T Consensus 81 ~~~~~~~~~~~~~--~-----~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~g~~~ 149 (381)
T PRK03633 81 FAAGCAGLGLMVG--F-----WSWLAWRFVAGIGCAMIWVVVESALMCSGT----SRNRGRLLAAYMMVYYLGTVLGQLL 149 (381)
T ss_pred HHHHHHHHHHhcc--H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877766432 2 778899999999999988888777788665 7789999999999999999999999
Q ss_pred HHHhhc
Q psy195 178 TPIFRH 183 (691)
Q Consensus 178 ~~~l~~ 183 (691)
++.+.+
T Consensus 150 ~~~l~~ 155 (381)
T PRK03633 150 VSKVST 155 (381)
T ss_pred Hhcccc
Confidence 988755
No 31
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.80 E-value=1.6e-16 Score=180.62 Aligned_cols=173 Identities=10% Similarity=0.074 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHH
Q psy195 24 FFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNV 103 (691)
Q Consensus 24 ~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~i 103 (691)
..+++..+....-.-.+..-+| .+.+++|.+..+.+++.+.+.++..++.+++|+++||+ |||+++.++.+++.++.+
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHH
Confidence 3333434333333323333344 44578999999999999999999999999999999998 999999999999999998
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 104 LLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 104 ll~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
+++.+.. . +.++++|+++|+|.|+..+.....+.+.++ ++++|+++++++....++|..+||.+++++.+
T Consensus 87 ~~~~a~~--~-----~~li~~r~l~G~g~~~~~~~~~~~l~~~~~---~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 87 AAAFSPT--A-----SWLIATRALLAIGAAMIVPATLAGIRATFT---EEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHcCC--H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8877532 2 789999999999999988888777777663 37889999999999999999999999999987
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 184 DMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 184 ~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
..+||+.|++...+.++.+++....
T Consensus 157 -------~~gwr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 157 -------HFYWGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred -------cCChHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999998766555554444333
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.80 E-value=6.2e-17 Score=182.21 Aligned_cols=169 Identities=9% Similarity=0.103 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHH
Q psy195 25 FIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVL 104 (691)
Q Consensus 25 ~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~il 104 (691)
.+++..+...+........+| .+.+++|.+..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIP-TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHH
Confidence 333444444444433333344 55678999999999999999999999999999999998 9999999999999888887
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy195 105 LTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHD 184 (691)
Q Consensus 105 l~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~ 184 (691)
...+. +. ..++++|++.|++.|...+...+++.|.+| +++|+++.+++.....+|..+||.+++++.+
T Consensus 84 ~~~~~--~~-----~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~----~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~- 151 (485)
T TIGR00711 84 CGVAP--NL-----ELMIIFRVIQGFGGGPLIPLSFSTLLNIYP----PEKRGRAMAIWGLTVLVAPALGPTLGGWIIE- 151 (485)
T ss_pred HhCcC--CH-----HHHHHHHHHHHhhhhhHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-
Confidence 76643 22 788999999999999999999999999887 8899999999999999999999999998876
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 185 MQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 185 ~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
..+|++.|++.+.+.++.+++..
T Consensus 152 ------~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 152 ------NYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred ------CcCceehhhhhhHHHHHHHHHHH
Confidence 57899998887665554444333
No 33
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.80 E-value=4.2e-16 Score=171.84 Aligned_cols=164 Identities=18% Similarity=0.182 Sum_probs=133.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++.++...++..++.......++.. .+++|.+..+.+++.+.+.+...++.+++|+++||+ ||||++.++.++..+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 456666777777766655444444444 568899999999999999999999999999999998 999999999998888
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
+.+++.... . .++.|+++|++.|...|...+++.|.+| +++|+++.++.....++|.++||.++++
T Consensus 81 ~~~~~~~~~---------~-~~~~r~l~G~~~a~~~pa~~a~i~~~~~----~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 81 GCLLMLFGI---------H-PLLAYGLVGIGAAAYSPAKYGILTELLP----GEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred HHHHHHHHH---------H-HHHHHHHHHHHHHHHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777655431 2 3678999999999999999999999998 8999999999999999999999999999
Q ss_pred hhccccccCCCCchhHHHHHHHHHHHHH
Q psy195 181 FRHDMQCFGQEACFPLAFGVPALLMFLA 208 (691)
Q Consensus 181 l~~~~~~~g~~~~w~~~F~i~~~l~~l~ 208 (691)
+.+. .|+..+.+.+...+++
T Consensus 147 l~~~--------~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 147 LADP--------HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHH--------HHHHHHHHHHHHHHHH
Confidence 8762 2666666555443333
No 34
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.79 E-value=2.2e-17 Score=176.65 Aligned_cols=165 Identities=19% Similarity=0.357 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHH
Q psy195 28 INEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTV 107 (691)
Q Consensus 28 ~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~ 107 (691)
+..++..++.....+.++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++..+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhh
Confidence 445555666666666677688889999999999999999999999999999999997 9999999999998888555544
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy195 108 TAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQC 187 (691)
Q Consensus 108 s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~ 187 (691)
+ ++. +.++++|++.|++.+...+...+++.|.+| +++|++.+++...+.++|.+++|.+++.+.+
T Consensus 82 ~--~~~-----~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 146 (352)
T PF07690_consen 82 A--SNF-----WLLLIARFLLGIGSGFFSPASNALIADWFP----PEERGRAFGILSAGFSLGSILGPLLGGFLIS---- 146 (352)
T ss_dssp H--CCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----TCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_pred h--hhH-----HHHhhhccccccccccccccccccccccch----hhhhhhccccccchhhhhhhcccchhhhhhh----
Confidence 3 222 778999999999999999999999999987 7899999999999999999999999998875
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHH
Q psy195 188 FGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 188 ~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
..+|+..|++.+++.++..++
T Consensus 147 ---~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 147 ---YFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp ---HCHHCCHHHHHHHHHHHHHHH
T ss_pred ---ccccccccccccchhhhhhhh
Confidence 467999999988877776654
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.79 E-value=1.9e-16 Score=178.11 Aligned_cols=147 Identities=10% Similarity=0.080 Sum_probs=125.7
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q psy195 51 VLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAV 130 (691)
Q Consensus 51 ~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gi 130 (691)
+++++..+.|.+.+.+.++..++.+++|+++||+ |||+++.++.++..++.++...+..... ..+++.|++.|+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAGGGI-----ALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHHcCc-----hHHHHHHHHHHH
Confidence 6889999999999999999999999999999998 9999999999888888776654322112 678899999999
Q ss_pred HhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC-CchhHHHHHHHHHHHHHH
Q psy195 131 GTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQE-ACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 131 g~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~-~~w~~~F~i~~~l~~l~~ 209 (691)
+.|...+....+++|++| +++|+++.++...+.++|.++++.+++++.+ . .+|+..|++.++..++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~-------~~~gw~~~f~i~~~~~~~~~ 212 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAP----PKERSRLLGMSTSGFQLGTFIFLPISGWLCE-------SWGGWPMIFYVFGIVGCAWS 212 (465)
T ss_pred hcccchhhHHHHHHhcCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccCCCCeehhhhhHHHHHHH
Confidence 999999999999999998 8999999999999999999999999998876 4 389999998777655554
Q ss_pred HHHHh
Q psy195 210 IVFII 214 (691)
Q Consensus 210 l~~~~ 214 (691)
++++.
T Consensus 213 ~~~~~ 217 (465)
T TIGR00894 213 LLWFV 217 (465)
T ss_pred HHHHH
Confidence 44433
No 36
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.79 E-value=3.7e-16 Score=174.45 Aligned_cols=150 Identities=9% Similarity=0.035 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q psy195 39 GMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKR 118 (691)
Q Consensus 39 ~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~ 118 (691)
.....++.+ .+++|++..+.|++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++...+...
T Consensus 41 ~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~------- 111 (434)
T PRK11663 41 SFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGFSSSL------- 111 (434)
T ss_pred hHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHHHhHH-------
Confidence 333445555 456999999999999999999999999999999998 99999999999888888877665321
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHH
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAF 198 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F 198 (691)
+.+++.|++.|++.|...+...+++++++| +++|++.+++++.+.++|..+++.+.+++.+ ..+|+..|
T Consensus 112 ~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~----~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~gw~~~f 180 (434)
T PRK11663 112 WAFALLWVLNAFFQGWGWPVCAKLLTAWYS----RTERGGWWAIWNTAHNVGGALIPLVVGAIAL-------HYGWRYGM 180 (434)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cccHHHHH
Confidence 677888999999999988999999999997 8899999999999999999999999998876 46799999
Q ss_pred HHHHHHHHHH
Q psy195 199 GVPALLMFLA 208 (691)
Q Consensus 199 ~i~~~l~~l~ 208 (691)
.+.+++.++.
T Consensus 181 ~~~~i~~~~~ 190 (434)
T PRK11663 181 MIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHH
Confidence 8877654443
No 37
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.79 E-value=2.4e-16 Score=172.09 Aligned_cols=172 Identities=14% Similarity=0.162 Sum_probs=139.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
.+++.+..+++..+...+..+......+ .+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~ 86 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVL 86 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 3456666666666666666665544444 56778999999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
..++.++...... + +.++++|++.|++.+...+...+++.|++| +++|+++.++...+.++|..+++.+
T Consensus 87 ~~~~~~~~~~~~~--~-----~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~l 155 (405)
T TIGR00891 87 FSAGTLACGFAPG--Y-----ITMFIARLVIGIGMGGEYGSSAAYVIESWP----KHLRNKASGLLISGYAVGAVVAAQV 155 (405)
T ss_pred HHHHHHHHHHhcc--H-----HHHHHHHHHHHhhhhhhhHHHHHHHHHhCC----hhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 8888877766422 2 778899999999999999999999999887 8899999999999999999999999
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHH
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFL 207 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l 207 (691)
.+.+.+. . ..+|+..|.+.++..++
T Consensus 156 ~~~l~~~---~--~~~w~~~f~~~~~~~~~ 180 (405)
T TIGR00891 156 YSLVVPV---W--GDGWRALFFISILPIIF 180 (405)
T ss_pred HHHHHHh---c--CccHHHHHHHHHHHHHH
Confidence 8887652 0 12499888875544333
No 38
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.79 E-value=3.3e-16 Score=173.59 Aligned_cols=163 Identities=15% Similarity=0.196 Sum_probs=134.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+.+....+..+...+..+.. ..+..++.+++|+++.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~ 95 (426)
T PRK12307 18 NALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSV 95 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHH
Confidence 34444444444444554443 3344556788999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
+.++...+... +.++++|++.|+|.|...+...++++|.+| +++|+++.++...+..+|.++++.+.+.
T Consensus 96 ~~~~~~~~~~~-------~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 96 GTGLSGLASGV-------IMLTLSRFIVGMGMAGEYACASTYAVESWP----KHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHhHH-------HHHHHHHHHHHHHHhhHHHHHHHHHHHhCC----HhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 88877765322 788999999999999999999999999887 8899999999999999999999988887
Q ss_pred hhccccccCCCCchhHHHHHHHH
Q psy195 181 FRHDMQCFGQEACFPLAFGVPAL 203 (691)
Q Consensus 181 l~~~~~~~g~~~~w~~~F~i~~~ 203 (691)
+.+ ..+|+..|.+...
T Consensus 165 l~~-------~~~w~~~f~i~~~ 180 (426)
T PRK12307 165 FAE-------AYGWRAAFFVGLL 180 (426)
T ss_pred Hcc-------cCCHHHHHHHHHH
Confidence 766 4689999887543
No 39
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.78 E-value=3.4e-16 Score=168.58 Aligned_cols=151 Identities=15% Similarity=0.103 Sum_probs=124.8
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q psy195 42 TVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFT 121 (691)
Q Consensus 42 ~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l 121 (691)
+.+..++.+++|++..+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++.++.+.+... +.+
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 94 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIADSL-------AAL 94 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHHHH-------HHH
Confidence 4456677789999999999999999999999999999999998 99999999999999998887775322 778
Q ss_pred HHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHH
Q psy195 122 LVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVP 201 (691)
Q Consensus 122 ~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~ 201 (691)
+++|++.|++.|...+.......+++| ++|+++.++...+.++|.++++.+.+.+.+ ..+||..|.+.
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~f~~~ 162 (377)
T TIGR00890 95 YLTYGLASAGVGIAYGIALNTAVKWFP-----DKRGLASGIIIGGYGLGSFILSPLITSVIN-------LEGVPAAFIYM 162 (377)
T ss_pred HHHHHHHhHHHHHHHHhHHHHHHHHcC-----cccHHHHHHHHHhcchhHhHHHHHHHHHHh-------cccHHHHHHHH
Confidence 899999999999888777888888775 468999999999999998876666655544 46799999887
Q ss_pred HHHHHHHHHHH
Q psy195 202 ALLMFLAIIVF 212 (691)
Q Consensus 202 ~~l~~l~~l~~ 212 (691)
+++.++..+..
T Consensus 163 ~~~~~~~~~~~ 173 (377)
T TIGR00890 163 GIIFLLVIVLG 173 (377)
T ss_pred HHHHHHHHHHH
Confidence 77655554433
No 40
>KOG2532|consensus
Probab=99.78 E-value=9.3e-17 Score=179.77 Aligned_cols=150 Identities=15% Similarity=0.196 Sum_probs=133.9
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q psy195 51 VLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAV 130 (691)
Q Consensus 51 ~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gi 130 (691)
+++++..+.+++.+.+.+|+.++.+++|+++||+ |-|+++.++.++..+++++.+.+...+. +.+++.|+++|+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~~~-----~~~~~~R~lqGl 140 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASIGF-----YLLLVLRFLQGL 140 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHhcc-----hhhHHHHHHhHH
Confidence 5789999999999999999999999999999998 9999999999999999999988753222 667999999999
Q ss_pred HhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 131 GTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 131 g~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
+.|...|++..+.+.+.| +++|+++.+..+.+..+|.+++-.+++++.+. ..||+..|++.+++.++..+
T Consensus 141 ~~g~~~pa~~~i~~~W~P----~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s------~~GW~sifY~~g~~g~i~~~ 210 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAP----PNERSTFIAILTAGSQLGTIITMPVSGLLCES------SLGWPSIFYVFGIVGLIWFI 210 (466)
T ss_pred HHhHHHhhhhceeeeECC----HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc------CCCCchHHHHHHHHHHHHHH
Confidence 999999999999999998 99999999999999999999999999998873 47899999998887776666
Q ss_pred HHHhhc
Q psy195 211 VFIIGK 216 (691)
Q Consensus 211 ~~~~~~ 216 (691)
+++...
T Consensus 211 ~w~~~~ 216 (466)
T KOG2532|consen 211 LWFLFY 216 (466)
T ss_pred HHHHHh
Confidence 655543
No 41
>PRK03699 putative transporter; Provisional
Probab=99.78 E-value=6.8e-16 Score=169.93 Aligned_cols=175 Identities=7% Similarity=-0.010 Sum_probs=139.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
|++|..+...+..++...........++. +.+++|+|..+.+++.+.+.++..++.+++|+++||+ ||||++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 45566776666666655554444444554 5578999999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
..++.++...+.. . ..++++|++.|++.|...+...+++.|.+| +++|+...+..+...++|+.++|.+
T Consensus 82 ~~i~~~l~~~~~~--~-----~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~~ 150 (394)
T PRK03699 82 MILAVAGLMFSHS--L-----ALFSIAMFVLGVVSGITMSIGTFLITHVYE----GKQRGSRLLFTDSFFSMAGMIFPII 150 (394)
T ss_pred HHHHHHHHHHcch--H-----HHHHHHHHHHHHhhHhhccchhHHhhhhcc----cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887776422 1 678899999999999988888999999887 6789999998888888999999988
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
.+.+... ..+||..|.+.+++.++.+++
T Consensus 151 ~~~l~~~------~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 151 AAYLLAR------SIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHhc------cccHHHHHHHHHHHHHHHHHH
Confidence 8876542 468999998877655544433
No 42
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.78 E-value=2.5e-15 Score=165.95 Aligned_cols=155 Identities=12% Similarity=0.084 Sum_probs=128.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
+.||.+....+..++...+.+...++++.++ +++|++..++|++.+.+.++..++.+++|+++||+ ||||++.++.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHH
Confidence 4678888888888887788777777888888 56899999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHhh--cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHH-HHH
Q psy195 98 YLGGNVLLTVTA--IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGS-LIS 174 (691)
Q Consensus 98 ~~ig~ill~~s~--~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~-~ig 174 (691)
..++.+++.... .++. ..+++.|++.|+|.+...+...+.+.+.+| +++|+++.++.+.+.++|. .++
T Consensus 88 ~~~~~~~~~~~~~~~~~~-----~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~g~~~~g 158 (402)
T TIGR00897 88 WCVGHAAFIVFGLGHANY-----PLILLFYGIRGLGYPLFAYSFLVWVVYNTK----QDNLSSAVGWFWAVYSIGIGVFG 158 (402)
T ss_pred HHHHHHHHHHHhccCccH-----HHHHHHHHHHHcchHHHHhHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 888766543211 1112 667789999999988877777788888776 8899999999999999996 578
Q ss_pred HHHHHHhhc
Q psy195 175 TFITPIFRH 183 (691)
Q Consensus 175 p~i~~~l~~ 183 (691)
|.+++++.+
T Consensus 159 ~~~~~~l~~ 167 (402)
T TIGR00897 159 SYYSSYAIP 167 (402)
T ss_pred HHHHHhccc
Confidence 988887765
No 43
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.78 E-value=3.1e-15 Score=164.21 Aligned_cols=167 Identities=14% Similarity=0.084 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHH
Q psy195 25 FIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVL 104 (691)
Q Consensus 25 ~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~il 104 (691)
...+..+....+++...+.+|.+ .+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHH
Confidence 33444445556665555556554 467999999999999999999999999999999998 9999999999888888877
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy195 105 LTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHD 184 (691)
Q Consensus 105 l~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~ 184 (691)
+..+.. . ..++++|++.|++.+...+...+++.|.+| +++|++..++.+...++|..++|.+++.+.+
T Consensus 85 ~~~~~~--~-----~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~----~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~- 152 (392)
T PRK10473 85 CSLAET--S-----SLFLAGRFLQGIGAGCCYVVAFAILRDTLD----DRRRAKVLSLLNGITCIIPVLAPVLGHLIML- 152 (392)
T ss_pred HHHhCc--H-----HHHHHHHHHHHhhhhHHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 765422 1 667889999999999988889999999887 8899999999999999999999999888765
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 185 MQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 185 ~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
..+|+..|.+.+++.++..++
T Consensus 153 ------~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 153 ------KFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred ------CcChHHHHHHHHHHHHHHHHH
Confidence 467998888877655554443
No 44
>TIGR00898 2A0119 cation transport protein.
Probab=99.78 E-value=1.9e-16 Score=179.84 Aligned_cols=142 Identities=15% Similarity=0.128 Sum_probs=121.2
Q ss_pred HHHhcCCC---HHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q psy195 48 MHLVLLYD---EKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVG 124 (691)
Q Consensus 48 l~~~lg~s---~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~ 124 (691)
+.+++|++ ..+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++.++.+++. ++ +.++++
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~--~~-----~~~~~~ 186 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP--NY-----TVFLVF 186 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc--cH-----HHHHHH
Confidence 45678998 89999999999999999999999999997 999999999988888887776652 22 788999
Q ss_pred HHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHH
Q psy195 125 LLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALL 204 (691)
Q Consensus 125 ~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l 204 (691)
|++.|++.|...+...++++|.+| +++|+...++...+..+|.++++.++..+.+ ||..|.+.++.
T Consensus 187 r~l~G~~~~~~~~~~~~~~~e~~~----~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----------wr~~~~~~~i~ 252 (505)
T TIGR00898 187 RLLVGMGIGGIWVQAVVLNTEFLP----KKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----------WRWLQLAVSLP 252 (505)
T ss_pred HHHHHhhccchHHHHHHHhheecC----hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----------HHHHHHHHHHH
Confidence 999999999999999999999887 8889999999988999999999888765532 99888887765
Q ss_pred HHHHHHH
Q psy195 205 MFLAIIV 211 (691)
Q Consensus 205 ~~l~~l~ 211 (691)
.++..+.
T Consensus 253 ~~~~~~~ 259 (505)
T TIGR00898 253 TFLFFLL 259 (505)
T ss_pred HHHHHHH
Confidence 5544443
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.78 E-value=2.6e-15 Score=166.69 Aligned_cols=145 Identities=11% Similarity=0.091 Sum_probs=124.9
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHH
Q psy195 48 MHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLL 127 (691)
Q Consensus 48 l~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l 127 (691)
+.+++|.+..++++..+++.++..++.++.|+++||+ |||+++.++.+++.++.++...+.. . ..++++|++
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~--~-----~~l~~~r~l 113 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTTS--M-----TQFLIARFI 113 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcCC--H-----HHHHHHHHH
Confidence 4568999999999999999999999999999999998 9999999999988888887776532 2 788999999
Q ss_pred HHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHH
Q psy195 128 IAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFL 207 (691)
Q Consensus 128 ~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l 207 (691)
+|++.+...+...++..|.+| ++++++.+++...+.++|..+||.+++.+.+ ..+|+..|.+.++..++
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------~~gw~~~f~~~~~~~~i 182 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFG----QTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------FVHWKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHH
Confidence 999998777777788889887 7889999999999999999999999988876 46899999887776555
Q ss_pred HHHH
Q psy195 208 AIIV 211 (691)
Q Consensus 208 ~~l~ 211 (691)
+.+.
T Consensus 183 ~~~~ 186 (413)
T PRK15403 183 AFVG 186 (413)
T ss_pred HHHH
Confidence 5544
No 46
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.77 E-value=2.1e-15 Score=165.39 Aligned_cols=158 Identities=8% Similarity=-0.026 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHH----HHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIV----ILSIVY 98 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~----ig~il~ 98 (691)
.+.+.+..++...++....+++|.|++ ++|+|..+.|++.+.+.+...+++++.|.++||+ ||++... ++..+.
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 344445555666666677788999995 5899999999999999999999999999999998 9854332 222111
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 99 LGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 99 ~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
.+ .+...++. . +.+++.|++.+.+.+...|...++..+ ..++|++.++......++|.+++|.++
T Consensus 84 ~~--~~~~~~~~--~-----~~l~~~~~l~~~~~~~~~p~~~al~~~------~~~~~~~~~g~~~~~~slG~~~g~~l~ 148 (382)
T TIGR00902 84 AA--AFSAGAHN--A-----WLLFIAIGLFALFFSAGMPIGDALANT------WQKQFGLDYGKVRLIGSAAFIIGSALF 148 (382)
T ss_pred HH--HHHHhhhh--H-----HHHHHHHHHHHHHHccchhHHHHHHHH------HHHHcCCCccHHHHHHHHHHHHHHHHH
Confidence 11 11112211 1 778888999998888877877776544 246788899999999999999999999
Q ss_pred HHhhccccccCCCCchhHHHHHHHHH
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPALL 204 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~l 204 (691)
+.+.+ ..||+..|.+..++
T Consensus 149 g~l~~-------~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 149 GGLIG-------MFDEQNILAILTAG 167 (382)
T ss_pred HHHHH-------HcChhHHHHHHHHH
Confidence 99877 46899888876554
No 47
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.77 E-value=8.4e-16 Score=168.49 Aligned_cols=172 Identities=11% Similarity=0.121 Sum_probs=143.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
++.++.+.+..+....+.+...+.+|. +.+++|++..+.|++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence 455666777777776776666666665 4568999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.++...+.. . +.++++|++.|++.|...+...+++.|.+| +++|++.++....+..+|..++|.+++
T Consensus 80 ~~~~l~~~~~~--~-----~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~g~~l~~ 148 (382)
T PRK10091 80 IGNAMFTLSSS--Y-----LMLAIGRLVSGFPHGAFFGVGAIVLSKIIK----PGKVTAAVAGMVSGMTVANLLGIPLGT 148 (382)
T ss_pred HHHHHHHHhCc--H-----HHHHHHHHHHHhhhHHHHHHHHHHHHHhCC----hHHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 88888776532 2 788999999999999988888888999876 778999999999999999999999988
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
++.+ ..+||+.|.+.+++.++..+.
T Consensus 149 ~l~~-------~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 149 YLSQ-------EFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHhh-------hccHHHHHHHHHHHHHHHHHH
Confidence 8866 467999999877765544443
No 48
>TIGR00895 2A0115 benzoate transport.
Probab=99.77 E-value=5.9e-16 Score=168.25 Aligned_cols=150 Identities=15% Similarity=0.149 Sum_probs=126.7
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q psy195 42 TVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFT 121 (691)
Q Consensus 42 ~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l 121 (691)
.....++.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++.++..... +. +.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~ 108 (398)
T TIGR00895 37 GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFSVFTLLCALAT--NV-----TQL 108 (398)
T ss_pred HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHcc--ch-----HHH
Confidence 3445556678999999999999999999999999999999998 999999999888888777766542 22 678
Q ss_pred HHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHH
Q psy195 122 LVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVP 201 (691)
Q Consensus 122 ~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~ 201 (691)
++++++.|++.|...+...++++|.+| +++|++..++...+.++|..+++.+.+++.+ ..+|+..|.+.
T Consensus 109 ~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~g~~~~~~~~ 177 (398)
T TIGR00895 109 LILRFLAGLGLGGLMPNLNALVSEYAP----KRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP-------VFGWRSLFYVG 177 (398)
T ss_pred HHHHHHHhcccccchhhHHHHHHHHcC----HHhhchhHhhHhhHHHHHHHHHHHHHHHHhh-------cccceeehhhh
Confidence 889999999999999999999999887 8899999999999999999999999998876 46799888877
Q ss_pred HHHHHHHHH
Q psy195 202 ALLMFLAII 210 (691)
Q Consensus 202 ~~l~~l~~l 210 (691)
+++.++..+
T Consensus 178 ~~~~~~~~~ 186 (398)
T TIGR00895 178 GIAPLLLLL 186 (398)
T ss_pred hhHHHHHHH
Confidence 544444333
No 49
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.77 E-value=1.3e-16 Score=179.74 Aligned_cols=154 Identities=12% Similarity=-0.040 Sum_probs=123.3
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh---cCCCCCchhHHH
Q psy195 45 SLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA---IDPLNIPKRTFT 121 (691)
Q Consensus 45 ~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~---~~~~~~~~~~~l 121 (691)
...+.+++|++..+.|++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++.+... .++. ..+
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l 125 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGSGSVSL-----GLM 125 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhcccchH-----HHH
Confidence 4456788999999999999999999999999999999998 999999888887777666555421 1112 788
Q ss_pred HHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHH
Q psy195 122 LVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVP 201 (691)
Q Consensus 122 ~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~ 201 (691)
++.|++.|++.|...|....+++|++| +++|+++++++..+.++|.++++.+..++.... + ..+|+..|.+.
T Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~----~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~--~--~~~~~~~f~~~ 197 (467)
T PRK09556 126 IALWALSGFFQSTGGPCSYSTITRWTP----RRKRGRFLGFWNISHNLGGAGAGGVALWGANYF--F--DGHVIGMFIFP 197 (467)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHcC----ccceeeeEEeeecccchhhhHHHHHHHHHHHhh--c--cCcchhHHHHH
Confidence 999999999999999999999999998 888999999999999999999988877654410 0 12588888776
Q ss_pred HHHHHHHHHHH
Q psy195 202 ALLMFLAIIVF 212 (691)
Q Consensus 202 ~~l~~l~~l~~ 212 (691)
+++.++..++.
T Consensus 198 g~~~~~~~i~~ 208 (467)
T PRK09556 198 SIIALIIGFIG 208 (467)
T ss_pred HHHHHHHHHHH
Confidence 66554443333
No 50
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.77 E-value=2.4e-15 Score=163.60 Aligned_cols=155 Identities=14% Similarity=0.135 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCch
Q psy195 38 YGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPK 117 (691)
Q Consensus 38 y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~ 117 (691)
....+.+|.+.+ ++|++..+++++.+.+.++..++.+++|+++||+ |||+++.++.++..++.+++..... .
T Consensus 8 ~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~~--~---- 79 (377)
T PRK11102 8 DMYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQT--I---- 79 (377)
T ss_pred HHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHcc--H----
Confidence 344567777764 6899999999999999999999999999999998 9999999999988888887766532 2
Q ss_pred hHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHH
Q psy195 118 RTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLA 197 (691)
Q Consensus 118 ~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~ 197 (691)
+.++++|++.|++.+...+...+++.|.+| +++|++.+++.+...++|..++|.+++.+.+ ..+|+..
T Consensus 80 -~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~~ 147 (377)
T PRK11102 80 -DQLIYMRFLHGLAAAAASVVINALMRDMFP----KEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV-------WFSWHAI 147 (377)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcChHHH
Confidence 678899999999999999999999999887 8899999999999999999999999998876 4679999
Q ss_pred HHHHHHHHHHHHHHH
Q psy195 198 FGVPALLMFLAIIVF 212 (691)
Q Consensus 198 F~i~~~l~~l~~l~~ 212 (691)
|.+.+++.++..++.
T Consensus 148 ~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 148 FWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887776655554443
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.77 E-value=1.1e-15 Score=165.72 Aligned_cols=167 Identities=13% Similarity=0.048 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHH-HHHHHHHHHHHHH
Q psy195 28 INEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVI-LSIVYLGGNVLLT 106 (691)
Q Consensus 28 ~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~i-g~il~~ig~ill~ 106 (691)
+..++..++.....+.++.|+++++|.+..+.|++.+.+.+...+..++.|+++||+ ||||.+++ +.++..++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 445666777778889999999999999999999999999999999999999999998 99987665 4444445555555
Q ss_pred HhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHH--HHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy195 107 VTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEK--FFSLFYFSINAGSLISTFITPIFRHD 184 (691)
Q Consensus 107 ~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~--~~~~~~~~~nlG~~igp~i~~~l~~~ 184 (691)
.+.. + +.+++.|++.+.+.+...|...++..|..| +++|++ ..++.....++|..+||.+++++.+
T Consensus 83 ~~~~--~-----~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~- 150 (375)
T TIGR00899 83 WNRN--Y-----FLLLVLGVLLSSFASTANPQLFALAREHAD----RTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL- 150 (375)
T ss_pred hcch--H-----HHHHHHHHHHHhhhhhhHHHHHHHHHHHhh----hcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-
Confidence 4321 1 667778888887777777777777777654 444443 3577777889999999999998876
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 185 MQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 185 ~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
..+|+..|.+.++..++.+++.+
T Consensus 151 ------~~~~~~~f~~~~~~~~~~~~~~~ 173 (375)
T TIGR00899 151 ------GFGFTVMFLTAALAFVLCGVLVW 173 (375)
T ss_pred ------hcccHHHHHHHHHHHHHHHHHHH
Confidence 46799999987776555544433
No 52
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.77 E-value=3.6e-16 Score=175.84 Aligned_cols=150 Identities=8% Similarity=-0.030 Sum_probs=121.0
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHH-HH
Q psy195 46 LYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTL-VG 124 (691)
Q Consensus 46 ~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~-i~ 124 (691)
..+.+++|++..+++++.+.+.++..++.+++|+++||+ |||++++.+.++..++.++++.+.. . +.++ ..
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~--~-----~~l~~~~ 114 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSSN--V-----IELYLTA 114 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhhh--H-----HHHHHHH
Confidence 345578999999999999999999999999999999998 9999999998888888877766422 1 4444 35
Q ss_pred HHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHH
Q psy195 125 LLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALL 204 (691)
Q Consensus 125 ~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l 204 (691)
|++.|++.|...+...+++.++++ ++|+++.++.+.+.++|..++|.+.+.+.+ ..+||.+|++.+++
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~-----~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~-------~~gwr~~f~~~~~~ 182 (455)
T TIGR00892 115 GFITGLGLAFNFQPSLTMLGKYFY-----RRRPLANGLAMAGSPVFLSTLAPLNQYLFE-------SFGWRGSFLILGGL 182 (455)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHH-----hhHHHHHHHHHhcccHHHHHHHHHHHHHHH-------HhChHHHHHHHHHH
Confidence 688899998766666677788773 679999999999999999999999998876 46899999998877
Q ss_pred HHHHHHHHHhh
Q psy195 205 MFLAIIVFIIG 215 (691)
Q Consensus 205 ~~l~~l~~~~~ 215 (691)
.+++.+..+..
T Consensus 183 ~~~~~v~~~~~ 193 (455)
T TIGR00892 183 LLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHh
Confidence 66554444333
No 53
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.77 E-value=3e-16 Score=174.11 Aligned_cols=180 Identities=11% Similarity=0.045 Sum_probs=119.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
.+.+|.+.+..++..++++...++++.|+++++|++..+.|.+.+.+.++..+++++.|+++||+ ||||++.++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 87 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL 87 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 35667766777777787778889999999999999999999999999999999999999999998 99999988766555
Q ss_pred HHHHHHHHh-hcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVT-AIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 100 ig~ill~~s-~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
++...+... ..+... .....+.++.++..|...+...+...++.+ ...++++..++..+...++|.+++|.++
T Consensus 88 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 161 (420)
T PRK09528 88 VLFGPFFIYVFAPLLQ----YNILLGAIVGGIYLGFGFLAGAGAIEAYIE--RVSRRSGFEYGRARMWGSLGWALCAFIA 161 (420)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhhhccchhhhhhHHH--HHHhhccccchhhHHhhhHHHHHHHHHH
Confidence 443322111 000000 011222222333333222222222222221 1134567778888888899999999999
Q ss_pred HHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
+.+.+ .+|+..|++.+++.++.+++.+.
T Consensus 162 g~l~~--------~~~~~~f~~~~~~~~~~~~~~~~ 189 (420)
T PRK09528 162 GILFN--------INPQINFWLGSGSALILLVLLFF 189 (420)
T ss_pred HHHHh--------cCchHhHHHHHHHHHHHHHHHhc
Confidence 98865 36888888877665555444433
No 54
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.77 E-value=2.6e-15 Score=164.27 Aligned_cols=155 Identities=14% Similarity=0.061 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q psy195 39 GMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKR 118 (691)
Q Consensus 39 ~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~ 118 (691)
...+.+| .+.+++|++..+.|++.+.+.++..++.+++|+++||+ |||+++..+.+....+.+..... +++
T Consensus 9 ~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~--~~~----- 79 (368)
T TIGR00903 9 TFSPVLS-LVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLDP--FNY----- 79 (368)
T ss_pred HHHhhHH-HHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHh--ccH-----
Confidence 3334444 45678999999999999999999999999999999998 99987765544443333212211 122
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHH
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAF 198 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F 198 (691)
..++++|++.|+|.|.. .+.....+|++| +++|+++.++.+.+.++|.++++.+++++.+ ..+||..|
T Consensus 80 ~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~----~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------~~gWr~~f 147 (368)
T TIGR00903 80 EWLLACQLLAALGQPFL-LNAFAPAASQIR----EERRDLVISLLSFAMYLGIIFALAAGLKIYT-------AGGLQLLI 147 (368)
T ss_pred HHHHHHHHHHHhHhHHH-HHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccchHHHH
Confidence 78999999999999964 445555689887 8999999999999999999999999998876 57899999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy195 199 GVPALLMFLAIIVFII 214 (691)
Q Consensus 199 ~i~~~l~~l~~l~~~~ 214 (691)
.+.+++.++..+++..
T Consensus 148 ~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 148 IPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8866665554444333
No 55
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.76 E-value=1.3e-15 Score=171.05 Aligned_cols=170 Identities=12% Similarity=0.042 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 24 FFIVINEFCERFCYYGM---RTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 24 ~~l~~~~~~~~~~~y~i---~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++...++....++.. ......++.++ |++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i 105 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHH
Confidence 33333343444444432 23344567777 99999999999999999999999999999998 999999999988888
Q ss_pred HHHHHHHhhc--CCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHH-HHHHH
Q psy195 101 GNVLLTVTAI--DPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSL-ISTFI 177 (691)
Q Consensus 101 g~ill~~s~~--~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~-igp~i 177 (691)
+.+++++... .+. ..+++.|++.|++.|...+.....+++++| +++|+++.++++.+.++|+. ++|.+
T Consensus 106 ~~~~~~~~~~~~~~~-----~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~l~ 176 (452)
T PRK11273 106 VMLFMGFVPWATSSI-----AVMFVLLFLCGWFQGMGWPPCGRTMVHWWS----QKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred HHHHHHhhhcccccH-----HHHHHHHHHHHHHHhccchHHHHHHHHhCC----hHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 8877765421 111 567888999999999988888888999887 88899999999999998864 45554
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
...+.. ..+|+..|++.+++.++..++
T Consensus 177 ~~~~~~-------~~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 177 LLGMAW-------FNDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHHH-------hccHHHHHHHHHHHHHHHHHH
Confidence 433322 247999998877665554333
No 56
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.76 E-value=1.4e-15 Score=172.62 Aligned_cols=178 Identities=14% Similarity=0.108 Sum_probs=125.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH----HHH--HHHHHHHHHHHhHHHHHHHhHhcCchhHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKT----ATV--MFHIWTGLCYFFPLFGGIIADTYLGKFLTIVI 93 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~----ag~--i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~i 93 (691)
++.+....+..+++.+-+. +..+...++.++++.+... .+. +.++..++..++++++|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 3444455555556554443 4455666777777543321 111 24667788899999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchh---HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHH
Q psy195 94 LSIVYLGGNVLLTVTAIDPLNIPKR---TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAG 170 (691)
Q Consensus 94 g~il~~ig~ill~~s~~~~~~~~~~---~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG 170 (691)
+.+++.++.++.+++. ++..-+. ..++++|+++|+|.|+..++..++++|++| +++|++..++...+..+|
T Consensus 93 ~~~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p----~~~Rg~~~~~~~~~~~~G 166 (490)
T PRK10642 93 TIVIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSP----DRKRGFMGSWLDFGSIAG 166 (490)
T ss_pred HHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCC----CCCCcHHHHHHHHHHHHH
Confidence 9999999998887752 1100000 248899999999999999999999999998 788999999988888888
Q ss_pred HHHHHHHHHHhhcccc--ccCCCCchhHHHHHHHHHHH
Q psy195 171 SLISTFITPIFRHDMQ--CFGQEACFPLAFGVPALLMF 206 (691)
Q Consensus 171 ~~igp~i~~~l~~~~~--~~g~~~~w~~~F~i~~~l~~ 206 (691)
..+|+.+...+..... ... ..|||..|++.++..+
T Consensus 167 ~~lg~~~~~~~~~~~~~~~~~-~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 167 FVLGAGVVVLISTIVGEANFL-DWGWRIPFFIALPLGI 203 (490)
T ss_pred HHHHHHHHHHHHHhcCHHHhc-CccHHHHHHHHHHHHH
Confidence 8888766554321000 000 3679999988654333
No 57
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.76 E-value=1.8e-15 Score=167.98 Aligned_cols=179 Identities=8% Similarity=0.003 Sum_probs=140.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
++.++.+++..++...... ........+++++|++..+.|++.+++.++..++++++|+++||+ |||+++..+.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~d~~-~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRI-NIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWG 84 (412)
T ss_pred hHHHHHHHHHHHHHHhhhh-hHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHH
Confidence 4444444443333333332 334455578899999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.++.+++... ..++++|++.|++.|...+....+++|++| +++|++..+++..+.++|.++++.+++
T Consensus 85 ~~~~~~~~~~~~-------~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~----~~~rg~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T TIGR02332 85 IASTATMFATGP-------ESLYLLRILVGIAEAGFLPGILLYLTFWFP----AYFRARANALFMIAMPVTMALGLILSG 153 (412)
T ss_pred HHHHHHHHhcCH-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888775322 788999999999999999999999999998 889999999999999999999999998
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
++.......+ ..+||..|.+.++..++.+++.
T Consensus 154 ~l~~~~~~~~-~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 154 YILALDGLMA-LKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred HHHhCCCCCC-ccchhHHHHHHHHHHHHHHHHH
Confidence 8753100000 3589999998776655444333
No 58
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.76 E-value=3.9e-15 Score=163.92 Aligned_cols=174 Identities=10% Similarity=0.073 Sum_probs=121.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHhHHHHHHHhHhcCchhHHHHH-HHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTG-LCYFFPLFGGIIADTYLGKFLTIVI-LSIV 97 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i-~~~i~~l~~G~LaDr~lGRkk~i~i-g~il 97 (691)
.+..+.+++..++...+.....+.++.|+.+++|++.++.|++.+...+ +..++++++|+ +||+ ||||.+++ +.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~ 91 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLL 91 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHH
Confidence 4445666666788888888888999999999999999999999876655 55566666666 9998 99987654 4444
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHH-HHHHHHHhhchhhhhhhhhhccCCCcchhhhH--HHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVG-LLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQL--EKFFSLFYFSINAGSLIS 174 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~-~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~r--g~~~~~~~~~~nlG~~ig 174 (691)
..++..+.+++... +.+++. +++.+.+ +...|....+..|..+ ++.| +...++.+.+.++|.++|
T Consensus 92 ~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~lg~~~g 159 (393)
T PRK15011 92 GVLACTLFAWNRNY-------FVLLFVGVFLSSFG-STANPQMFALAREHAD----KTGREAVMFSSFLRAQVSLAWVIG 159 (393)
T ss_pred HHHHHHHHHHhhHH-------HHHHHHHHHHHHHH-HhhHHHHHHHHHHHhh----hccchHHHHHHHHHHHHHHHHHHh
Confidence 44555555443211 444334 4444444 4556777777777554 3333 444578888899999999
Q ss_pred HHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 175 TFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 175 p~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
|.+++++.+ ..|||..|.+.+++.++..+..+.
T Consensus 160 ~~i~~~l~~-------~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 160 PPLAYALAM-------GFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred hHHHHHHHH-------hcChHHHHHHHHHHHHHHHHHHHh
Confidence 999999876 468999998877665555444333
No 59
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.76 E-value=6.4e-15 Score=164.36 Aligned_cols=170 Identities=15% Similarity=0.217 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHHHHHH---HHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHH
Q psy195 30 EFCERFCYYGMRTVLSLYMHLVLL---YDEKTATVMFH---IWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNV 103 (691)
Q Consensus 30 ~~~~~~~~y~i~~~l~~yl~~~lg---~s~~~ag~i~~---~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~i 103 (691)
.+++.+.+. ..+++..++.++++ .+..+.+.+.+ ...++..++++++|+++||+ ||||++.++.+++.++.+
T Consensus 31 ~~~~~~d~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 31 NLVEWFDFY-VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 344444433 45667778888874 55554444444 44445559999999999998 999999999999999888
Q ss_pred HHHHhhcCCCCCc---hhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 104 LLTVTAIDPLNIP---KRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 104 ll~~s~~~~~~~~---~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
+.+++. ++... ....+++.|+++|+|.|+..+...++++|++| +++|++..++.+.+.+.|.++++.+...
T Consensus 109 ~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p----~~~rg~~~~~~~~~~~~G~~~~~~~~~~ 182 (432)
T PRK10406 109 VIACLP--GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAV----EGRKGFYASFQYVTLIGGQLLALLVVVV 182 (432)
T ss_pred HHhhcC--CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCC----CCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877642 11100 00468899999999999999999999999887 7889999999988889998888876654
Q ss_pred hhcccccc-CCCCchhHHHHHHHHHHHH
Q psy195 181 FRHDMQCF-GQEACFPLAFGVPALLMFL 207 (691)
Q Consensus 181 l~~~~~~~-g~~~~w~~~F~i~~~l~~l 207 (691)
+....... -...|||.+|.+.++..++
T Consensus 183 ~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 183 LQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 43200000 0035799999886665443
No 60
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.76 E-value=4.8e-15 Score=167.68 Aligned_cols=178 Identities=15% Similarity=0.085 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.+.......++.....++..+.+ .++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 37 AFHLSWISFFTCFVSTFAAAPLL-PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHH
Confidence 33333333444444444444433 356778999999999999999999999999999999998 9999999998888888
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.++.+.+... ..++++|++.|++.+... ....++++++| +++|+++.++.....++|+.+++.+.+.+
T Consensus 115 ~~~~~~~~s~-------~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~----~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 115 VFCMSLVSSA-------TGFIAVRFFIGFSLATFV-SCQYWMSTMFN----GKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHHHHHhcCH-------HHHHHHHHHHHHHHHhhH-HHHHHHHHhcC----hhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776665322 677789999999988754 34567899897 88999999998888888888887766554
Q ss_pred hccccccC--CCCchhHHHHHHHHHHHHHHHHHH
Q psy195 182 RHDMQCFG--QEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 182 ~~~~~~~g--~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
.......+ +..+||..|.+.+++.++..++.+
T Consensus 183 ~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 183 FPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 32100000 024799999987776655444333
No 61
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.75 E-value=3.1e-15 Score=164.88 Aligned_cols=152 Identities=14% Similarity=0.111 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy195 36 CYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNI 115 (691)
Q Consensus 36 ~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~ 115 (691)
.++...+.+| .+.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.+++.++.++.+++.. +
T Consensus 24 ~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~~--~-- 97 (393)
T PRK09705 24 LLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYPQ--S-- 97 (393)
T ss_pred hhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCcc--h--
Confidence 3344445455 45678999999999999999999999999999999998 9999999999999999998887632 2
Q ss_pred chhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchh
Q psy195 116 PKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFP 195 (691)
Q Consensus 116 ~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~ 195 (691)
..++++|++.|+|.|...+..+.++.+++| ++|+++.+.+..+.++|..+|+.+++++.+. ..+|+
T Consensus 98 ---~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------~~~w~ 163 (393)
T PRK09705 98 ---ALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-----QRTPLVMGLWSAALMGGGGLGAAITPWLVQH------SETWY 163 (393)
T ss_pred ---HHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCHH
Confidence 778899999999999999999999988774 5689999999999999999999999887662 23799
Q ss_pred HHHHHHHHHHHH
Q psy195 196 LAFGVPALLMFL 207 (691)
Q Consensus 196 ~~F~i~~~l~~l 207 (691)
..+.+.++..++
T Consensus 164 ~~~~~~~~~~~~ 175 (393)
T PRK09705 164 QTLAWWALPAVV 175 (393)
T ss_pred HHHHHHHHHHHH
Confidence 777654444333
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.75 E-value=1.8e-14 Score=158.21 Aligned_cols=170 Identities=15% Similarity=0.138 Sum_probs=134.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
.|..+......++..++.....+.+|.+ .+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~~ 84 (394)
T PRK11652 7 VNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 4445555555555455544444445544 567999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.++..... +. ..++++|++.|++.+...+....+..|.++ ++++++..++...+..+|..++|.+++
T Consensus 85 ~~~~~~~~~~--~~-----~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~i~~ 153 (394)
T PRK11652 85 LGTLVALFAH--SL-----TVLIAASAIQGLGTGVGGVMARTLPRDLYE----GTQLRHANSLLNMGILVSPLLAPLIGG 153 (394)
T ss_pred HHHHHHHHHc--cH-----HHHHHHHHHHHhhhhHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877766542 22 778899999999998888888888888776 778899999999999999999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
.+.+ ..+|+..|.+.++..++..
T Consensus 154 ~l~~-------~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 154 LLTT-------LFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHh-------ccChHHHHHHHHHHHHHHH
Confidence 8876 4679999988765544433
No 63
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.74 E-value=8.1e-15 Score=158.72 Aligned_cols=181 Identities=10% Similarity=0.103 Sum_probs=157.0
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHH
Q psy195 17 PKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSI 96 (691)
Q Consensus 17 ~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~i 96 (691)
+..+..++.+.+..|+....-+.....+|.- .+++|.|...+|+.++.|..+..++.|+...++||+ .||++++....
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~i-A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPI-AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 3446666777777777767767666666655 467999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 97 VYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 97 l~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
+++++.++.+++. ++ ..+.++|++.|+..|.+.+...+..++..| +++|+++.+....+..++..+|..
T Consensus 87 lFi~~n~l~alAp--~f-----~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvp----p~~~~~Aiaiv~~G~tlA~v~GvP 155 (394)
T COG2814 87 LFIVSNLLSALAP--SF-----AVLLLARALAGLAHGVFWSIAAALAARLVP----PGKRGRALALVFTGLTLATVLGVP 155 (394)
T ss_pred HHHHHHHHHHHhc--cH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----ccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999999999873 23 899999999999999999999999999887 999999999999999999999999
Q ss_pred HHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q psy195 177 ITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKP 217 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~ 217 (691)
++.++.+ ..|||..|.+.+++.++.++..+...|
T Consensus 156 LGt~ig~-------~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 156 LGTFLGQ-------LFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHH-------HhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999987 578999999988877777766666555
No 64
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.74 E-value=3.2e-15 Score=164.55 Aligned_cols=177 Identities=11% Similarity=0.053 Sum_probs=130.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.+|.+....++...++....++++.|+++++|++..+.|++.+++.++..+++++.|+++||+ ||||.+..+.+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4567777778888888888889999999999999999999999999999999999999999998 999999887666555
Q ss_pred HHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 101 g~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
+...+.... .+.........+.+++++.+++.+...+....+..|. .++++..++......++|.++||.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~g~~~g~~~~g 154 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV------SRNSNFEYGKARMFGCVGWALCASIAG 154 (396)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh------hhhcccccchhhhhcccHHHHHHHHHh
Confidence 443322110 0000000003345667788888888788877776662 123345667777888999999999998
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
.+.+ .+|+..|++.+++.++..++.
T Consensus 155 ~l~~--------~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 155 ILFS--------IDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred hhhc--------cCchHHHHHHHHHHHHHHHHH
Confidence 7754 479999988776655554433
No 65
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.73 E-value=1.1e-21 Score=219.12 Aligned_cols=160 Identities=18% Similarity=0.236 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcC-CCCCchhHHHHHHHHHHHHHhhch
Q psy195 57 KTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAID-PLNIPKRTFTLVGLLLIAVGTGGI 135 (691)
Q Consensus 57 ~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~-~~~~~~~~~l~i~~~l~gig~G~~ 135 (691)
...+++.+...++..++.+++|+++||+ |||+++.++.++..+|.++..++... +. ..+.++|++.|+|.|+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSYNNF-----WMLLIGRFLIGFGIGGA 119 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccccccc-----ccccccccccccccccc
Confidence 4578899999999999999999999998 99999999999999999888776411 22 78899999999999999
Q ss_pred hhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHH--HHHHHHH
Q psy195 136 KPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMF--LAIIVFI 213 (691)
Q Consensus 136 ~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~--l~~l~~~ 213 (691)
.+..+.++.|..| ++.|+....+.+.+..+|.+++..++..+... ..+.+||..+.+..+..+ +....++
T Consensus 120 ~~~~~~~~~E~~~----~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~----~~~~~Wr~~~~~~~~~~l~~~~~~~~~ 191 (451)
T PF00083_consen 120 YVVSPIYISEIAP----PKHRGFLSSLFQLFWALGILLASLIGYIVSYY----SDNWGWRILLIFGAIPSLLVLLLRFFL 191 (451)
T ss_pred ccccccccccccc----cccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccc
Confidence 9999999999665 89999999999999999998888776554321 002459987776665432 3334556
Q ss_pred hhcccccccCCCCCcch
Q psy195 214 IGKPMYKINKPKGNVAL 230 (691)
Q Consensus 214 ~~~~~~~~~~~~~~~~~ 230 (691)
+++|++...+.+.+++.
T Consensus 192 pESP~wL~~~~~~~~A~ 208 (451)
T PF00083_consen 192 PESPRWLLSKGRDEEAE 208 (451)
T ss_pred ccccceecccccccccc
Confidence 77777765544444333
No 66
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.73 E-value=4.8e-15 Score=184.51 Aligned_cols=154 Identities=12% Similarity=0.113 Sum_probs=122.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDE--KTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~--~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
.+.+..+++..++..++..+....+..++...++.+. ...+++.+++.++..++++++|+++||+ |||++++++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 4556666666666666555555556566665566653 4568889999999999999999999998 999999998877
Q ss_pred HHHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 98 ~~ig~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
.+++.++..+.. ..++ +.++++|++.|++.|...+...++++|.+| +++|++++++...+.++|.++|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~-----~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~----~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 87 EVGLTLLIVLAYYLGWF-----WLAFAVTFLLGAQSAIYSPAKYGIIPELVG----KENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred HHHHHHHHHHHHHHccH-----HHHHHHHHHHHHHHHhhchHHHhhhHHhcC----cccchhhhhHHHHHHHHHHHHHHH
Confidence 666655544331 1122 788999999999999999999999999887 788999999999999999999999
Q ss_pred HHHHhhc
Q psy195 177 ITPIFRH 183 (691)
Q Consensus 177 i~~~l~~ 183 (691)
+++++..
T Consensus 158 l~~~l~~ 164 (1146)
T PRK08633 158 LFSFLFE 164 (1146)
T ss_pred HHHHHHH
Confidence 9998765
No 67
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.73 E-value=1.6e-14 Score=163.56 Aligned_cols=165 Identities=13% Similarity=0.109 Sum_probs=136.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHH
Q psy195 19 YPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVY 98 (691)
Q Consensus 19 ~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~ 98 (691)
+++.+..+.+..++..+.+..... +..++.+++|++..+++++.+.+.++..++.+++|+++||+ |||+++.++.++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 95 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITL-VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 344555555555555555544443 44556678999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 99 LGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 99 ~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
.++.+++.+... + +.++++|++.|++.+...+...+++.|.+| +++|++..++...+.++|..++|.+.
T Consensus 96 ~~~~~~~~~~~~--~-----~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~~~ 164 (496)
T PRK03893 96 SVGTLACGFAPG--Y-----WTLFIARLVIGMGMAGEYGSSATYVIESWP----KHLRNKASGFLISGFSIGAVVAAQVY 164 (496)
T ss_pred HHHHHHHHHHhH--H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887776522 1 778899999999999999999999999887 88999999999999999999999999
Q ss_pred HHhhccccccCCCCchhHHHHHHHH
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPAL 203 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~ 203 (691)
+.+.+ ..+|+..|.+..+
T Consensus 165 ~~l~~-------~~~w~~~f~~~~~ 182 (496)
T PRK03893 165 SLVVP-------VWGWRALFFIGIL 182 (496)
T ss_pred HHHhc-------cCCHHHHHHHHHH
Confidence 98876 5789998876443
No 68
>PRK11043 putative transporter; Provisional
Probab=99.72 E-value=3.6e-14 Score=156.22 Aligned_cols=160 Identities=11% Similarity=0.138 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHH--HHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcC
Q psy195 34 RFCYYGMRTVLSLY--MHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAID 111 (691)
Q Consensus 34 ~~~~y~i~~~l~~y--l~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~ 111 (691)
..++.+...++|.+ +.+++|.+..+++++.+++.++..++.+++|+++||+ |||+++.++.++..++.++.....
T Consensus 16 ~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-- 92 (401)
T PRK11043 16 MLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE-- 92 (401)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc--
Confidence 33444333444433 5678999999999999999999999999999999998 999999999888888777766542
Q ss_pred CCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q psy195 112 PLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQE 191 (691)
Q Consensus 112 ~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~ 191 (691)
+. +.++++|++.|++.+...+...+++.|.+| ++++++.++......++|..++|.+++++.+ .
T Consensus 93 ~~-----~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------~ 156 (401)
T PRK11043 93 SA-----AQLLVLRFVQAVGVCSAAVIWQALVIDRYP----AQKANRVFATIMPLVALSPALAPLLGAWLLN-------H 156 (401)
T ss_pred CH-----HHHHHHHHHHHhhhHHHHHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------c
Confidence 12 778889999999988888888889999887 7778888888888889999999999998876 4
Q ss_pred CchhHHHHHHHHHHHHHHHHH
Q psy195 192 ACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 192 ~~w~~~F~i~~~l~~l~~l~~ 212 (691)
.+|+..|.+.++..++..+..
T Consensus 157 ~g~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 157 FGWQAIFATLFAITLLLILPT 177 (401)
T ss_pred CChHHHHHHHHHHHHHHHHHH
Confidence 689998888776655544433
No 69
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.72 E-value=3.4e-14 Score=161.64 Aligned_cols=177 Identities=16% Similarity=0.175 Sum_probs=136.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.+..++...++.+++......-++-++ .++.-|+...+++..+..+-..+..+++|.++||+ .|||+++.+-++..+
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 4556666677777777664444444444 45678999999999999999999999999999998 999999999887766
Q ss_pred HHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 101 g~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
..+++++.. ..... .+.+++..++.|++.+...|+..+++.+.+| +++...+.++.....|+..++||.++|
T Consensus 88 ~~~~L~~l~~~~~~~---~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~----~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 88 VALLLAVLAFFGLLS---PWLLLILTFLLGIGSAFFNPAWQAIIPELVP----KEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHhCcCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----HhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 555554432 11111 1778888899999999999999999999887 888999999999999999999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
.+.. ..|-...|.+.++..++.++.+.
T Consensus 161 ~Lva-------~~G~~~~f~inalsfl~~i~~l~ 187 (524)
T PF05977_consen 161 ILVA-------FFGAAAAFLINALSFLISILALL 187 (524)
T ss_pred HHHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876 34556777777665555444433
No 70
>PRK15075 citrate-proton symporter; Provisional
Probab=99.71 E-value=2.2e-14 Score=160.15 Aligned_cols=178 Identities=11% Similarity=0.093 Sum_probs=121.9
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH-HHHH-----HHHHHhHHHHHHHhHhcCchhHH
Q psy195 17 PKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMF-HIWT-----GLCYFFPLFGGIIADTYLGKFLT 90 (691)
Q Consensus 17 ~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~-~~~~-----i~~~i~~l~~G~LaDr~lGRkk~ 90 (691)
++.++.....++..++..+-... .......+.++++.++.+.+... +... ++..+++++.|+++||+ ||||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~ 88 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFL-FGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKG 88 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHH
Confidence 33444444444544444444433 34455577788998877654332 2222 12236789999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCch---hHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHH
Q psy195 91 IVILSIVYLGGNVLLTVTAIDPLNIPK---RTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSI 167 (691)
Q Consensus 91 i~ig~il~~ig~ill~~s~~~~~~~~~---~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~ 167 (691)
+.++.+++.++.++.+++.. ...-. ...++++|++.|++.|...++...+++|++| +++|++..++...+.
T Consensus 89 l~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p----~~~rg~~~~~~~~~~ 162 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVPG--YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIAT----PGRKGFYTSWQSASQ 162 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCC----cccchHHHHHHHHHH
Confidence 99999999998888876521 10000 0246899999999999999999999999988 889999999988888
Q ss_pred HHHHHHHHHHHHHhhcccccc-CCCCchhHHHHHHH
Q psy195 168 NAGSLISTFITPIFRHDMQCF-GQEACFPLAFGVPA 202 (691)
Q Consensus 168 nlG~~igp~i~~~l~~~~~~~-g~~~~w~~~F~i~~ 202 (691)
++|..+++.+++.+....... ....+||..|.+..
T Consensus 163 ~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 163 QVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 888888887776653210000 00467999998744
No 71
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.71 E-value=2.2e-15 Score=162.44 Aligned_cols=150 Identities=12% Similarity=0.065 Sum_probs=127.2
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q psy195 44 LSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLV 123 (691)
Q Consensus 44 l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i 123 (691)
...++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++...+.. . +.+++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~ 88 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFSTS--L-----WVMAA 88 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhhh--H-----HHHHH
Confidence 44567788999999999999999999999999999999998 9999999999998888888776532 2 78889
Q ss_pred HHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHH-HHHHHhhccccccCCCCchhHHHHHHH
Q psy195 124 GLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIST-FITPIFRHDMQCFGQEACFPLAFGVPA 202 (691)
Q Consensus 124 ~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp-~i~~~l~~~~~~~g~~~~w~~~F~i~~ 202 (691)
+|++.|++.|...+...++++|.+| +++|++..++...+.++|..+++ .+++.+.. ..+|+..|.+.+
T Consensus 89 ~~~~~g~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 157 (379)
T TIGR00881 89 LWALNGIFQGMGWPPCGRTVTKWFS----RSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE-------LYSWHWVFIVPG 157 (379)
T ss_pred HHHHHHhhccccCCchHHHHHHhcC----HhhheeeEeehhccchhHHHHHHHHHHHHHHh-------cCCchhHHHHHH
Confidence 9999999999999999999999887 78899999999999999999999 45555544 467998888777
Q ss_pred HHHHHHHHHH
Q psy195 203 LLMFLAIIVF 212 (691)
Q Consensus 203 ~l~~l~~l~~ 212 (691)
++.++..++.
T Consensus 158 ~~~~~~~~~~ 167 (379)
T TIGR00881 158 IIAIIVSLIC 167 (379)
T ss_pred HHHHHHHHHH
Confidence 6555444333
No 72
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.71 E-value=6.7e-15 Score=164.51 Aligned_cols=154 Identities=12% Similarity=0.011 Sum_probs=122.4
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q psy195 44 LSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLV 123 (691)
Q Consensus 44 l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i 123 (691)
...++++ .|++..+.+++.+++.++..++.+++|+++||+ |||+.+.++.++..++.++...... .. .....+.+
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l~~ 123 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPW--AT-SSIAIMFV 123 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccc--cc-chHHHHHH
Confidence 4456665 599999999999999999999999999999997 9999999998888887776554311 00 00156678
Q ss_pred HHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHH
Q psy195 124 GLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPAL 203 (691)
Q Consensus 124 ~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~ 203 (691)
.|++.|++.|...+.....+.|++| +++|++++++++.+.++|+.+++.+.+..... ..+||..|++.++
T Consensus 124 ~~~l~g~~~g~~~~~~~~~i~~~~~----~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~------~~~w~~~f~~~~~ 193 (438)
T TIGR00712 124 LLFLNGWFQGMGWPPCGRTMVHWWS----QSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW------FNDWHAALYFPAI 193 (438)
T ss_pred HHHHHHHHhhcchHHHHHHHHHhcC----cccchhHHHHHHHHHHhHhHHHHHHHHHHHHH------hhhhHHHHHHHHH
Confidence 8999999999988888999999887 88899999999999999999988877654331 3579999998777
Q ss_pred HHHHHHHHH
Q psy195 204 LMFLAIIVF 212 (691)
Q Consensus 204 l~~l~~l~~ 212 (691)
+.++..++.
T Consensus 194 ~~~i~~~~~ 202 (438)
T TIGR00712 194 CAIIVALFA 202 (438)
T ss_pred HHHHHHHHH
Confidence 665544333
No 73
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.71 E-value=2.3e-14 Score=157.08 Aligned_cols=155 Identities=10% Similarity=0.020 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchh----HHHHHHHHHHHHHHHHH
Q psy195 30 EFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKF----LTIVILSIVYLGGNVLL 105 (691)
Q Consensus 30 ~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRk----k~i~ig~il~~ig~ill 105 (691)
.++...++....+++|.|++ ++|.|..++|++.+++.++..++.+++|.++||+ ||+ +.+.++.++.. +++
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~---~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA---VAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH---HHH
Confidence 34444566677788999995 5899999999999999999999999999999998 984 33322222111 111
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy195 106 TVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDM 185 (691)
Q Consensus 106 ~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~ 185 (691)
... .++. +.+++.|++.|++.+...|...++..++ .++|++.++..+...++|.++||.+++++.+
T Consensus 88 ~~~-~~~~-----~~l~i~~~l~g~~~~~~~~~~~a~~~~~------~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~-- 153 (382)
T PRK11128 88 WFG-AHSF-----WLLFVAIGLFNLFFSPLVPLTDALANTW------QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS-- 153 (382)
T ss_pred HHh-cccH-----HHHHHHHHHHHHHHcccccHHHHHHHHH------HhhccCCcchHHHHHHHHHHHHHHHHHHHHH--
Confidence 111 1112 6777899999999988888877776663 3456777888888889999999999999887
Q ss_pred cccCCCCchhHHHHHHHHHHHHH
Q psy195 186 QCFGQEACFPLAFGVPALLMFLA 208 (691)
Q Consensus 186 ~~~g~~~~w~~~F~i~~~l~~l~ 208 (691)
..+|+..|++.++..++.
T Consensus 154 -----~~g~~~~f~~~~~~~~~~ 171 (382)
T PRK11128 154 -----WFGEQAILWILTAGVASM 171 (382)
T ss_pred -----HcChhHHHHHHHHHHHHH
Confidence 468999888766544433
No 74
>PRK09952 shikimate transporter; Provisional
Probab=99.71 E-value=2.6e-14 Score=159.98 Aligned_cols=179 Identities=8% Similarity=-0.009 Sum_probs=122.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHH-----HHHHHHHHHhHHHHHHHhHhcCchhHHH
Q psy195 19 YPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVL--LYDEKTATVMF-----HIWTGLCYFFPLFGGIIADTYLGKFLTI 91 (691)
Q Consensus 19 ~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~l--g~s~~~ag~i~-----~~~~i~~~i~~l~~G~LaDr~lGRkk~i 91 (691)
++|.++..++..+++.+-........+.+..+++ +.++.. +.+. ++..++..++.++.|+++||+ |||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 3444555555555555444433333444555554 666663 4443 233455668888899999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCchh---HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHH
Q psy195 92 VILSIVYLGGNVLLTVTAIDPLNIPKR---TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSIN 168 (691)
Q Consensus 92 ~ig~il~~ig~ill~~s~~~~~~~~~~---~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~n 168 (691)
.++.+++.++.++.+++.. +..... ..++++|+++|++.|+..+....+++|++| +++|+...+....+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p----~~~rg~~~~~~~~g~~ 171 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPS--FSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAP----KNKKAFYSSGVQVGYG 171 (438)
T ss_pred HHHHHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCC----CCCCcHHHHHHHHHHH
Confidence 9999999998888777522 100000 258889999999999999999999999887 7889999999888888
Q ss_pred HHHHHHHHHHHHhhccccccC-CCCchhHHHHHHHHHH
Q psy195 169 AGSLISTFITPIFRHDMQCFG-QEACFPLAFGVPALLM 205 (691)
Q Consensus 169 lG~~igp~i~~~l~~~~~~~g-~~~~w~~~F~i~~~l~ 205 (691)
+|.+++..+...+........ ...+||..|.+.++..
T Consensus 172 ~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 172 VGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV 209 (438)
T ss_pred HHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH
Confidence 888888776665432100000 0357999998876543
No 75
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.71 E-value=4.5e-15 Score=160.54 Aligned_cols=167 Identities=13% Similarity=0.107 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.++..++..++.....+...+.+|.++++++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 345556666666666666777777788899999999999999999999999999999999998 9999999999999998
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.++...+.. +. +.++++|++.|++.+.. +...++++|.+| +++|++..++.....++|..+++.+++.+
T Consensus 81 ~~~~~~~~~-~~-----~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 81 CLWAGLAVQ-SY-----SVLLLLRLFIGIAGGSF-ASCMPWISFFFP----KKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHhh-hH-----HHHHHHHHHHHHhchhh-HhHHHHHHHhcC----HhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 887776530 12 77889999999996654 556788999887 88899999999888888888888777655
Q ss_pred hcccc-ccC--CCCchhHHHHH
Q psy195 182 RHDMQ-CFG--QEACFPLAFGV 200 (691)
Q Consensus 182 ~~~~~-~~g--~~~~w~~~F~i 200 (691)
..... ..+ ...+|++.|++
T Consensus 150 ~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 150 IGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHHhcccccccccccchhHH
Confidence 43100 000 02479988843
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.70 E-value=1.6e-14 Score=180.05 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHH--HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhc
Q psy195 57 KTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSI--VYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGG 134 (691)
Q Consensus 57 ~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~i--l~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~ 134 (691)
...+++.+++.+...++.+++|+++||+ |||+++.+... +.+.+..+.... .+++ +.++++|+++|++.+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~-~~s~-----~~l~~~~~l~gi~~a~ 124 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFH-LNSV-----PLLFAALFLMGIHSAL 124 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHH-HhhH-----HHHHHHHHHHHHHHHh
Confidence 4567788899999999999999999998 99998644222 111222122111 1222 7899999999999999
Q ss_pred hhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHH
Q psy195 135 IKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPAL 203 (691)
Q Consensus 135 ~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~ 203 (691)
..|...+++.++++ +++|+++.++..++.++|.++||.+++++.. ..+|+..|.+..+
T Consensus 125 ~~p~~~a~l~~~~~----~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~-------~~~~~~~~~~~~~ 182 (1140)
T PRK06814 125 FGPIKYSILPDHLN----KDELLGANALVEAGTFIAILLGTIIGGLATI-------SGNFVILVALLMG 182 (1140)
T ss_pred hchHHHHhhHhhcC----ccccchhhHHHHHHHHHHHHHHHHHHHHHHh-------ccccHHHHHHHHH
Confidence 99999999999998 8899999999999999999999999999877 4678888844333
No 77
>PRK10133 L-fucose transporter; Provisional
Probab=99.69 E-value=9.5e-14 Score=155.51 Aligned_cols=152 Identities=16% Similarity=0.110 Sum_probs=119.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
...+..+.+..+...+........+|. +++++|.+..+.|++.+.+.++..++.++.|+++||+ ||||++.++.+++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~ 102 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 334444444444445555444444554 4889999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 100 ig~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
++.+++.... .+++ ..++++|+++|+|.|...+..+++++|..| +++|....+..+....+|..+|+.++
T Consensus 103 ~~~~l~~~~~~a~~~-----~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~----~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 103 LGAALFWPAAEIMNY-----TLFLVGLFIIAAGLGCLETAANPFVTVLGP----ESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHhcCCH-----HHHHHHHHHHHHHHHHHHhhHHHHHHHhCC----hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987753221 2222 788999999999999999999999998654 56666678888888899999999887
Q ss_pred HHhh
Q psy195 179 PIFR 182 (691)
Q Consensus 179 ~~l~ 182 (691)
+.+.
T Consensus 174 ~~l~ 177 (438)
T PRK10133 174 QSLI 177 (438)
T ss_pred HHHH
Confidence 6543
No 78
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1.1e-14 Score=156.20 Aligned_cols=180 Identities=13% Similarity=0.109 Sum_probs=152.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHH
Q psy195 17 PKYPKAVFFIVINEFCERFCYYGMRTV---LSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVI 93 (691)
Q Consensus 17 ~~~~r~~~~l~~~~~~~~~~~y~i~~~---l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~i 93 (691)
+.+.|--+.++...++...+||.+.-+ ..+++.++.++|.++.|.+.+.+.+...++-.+.|.++||. +.|+.+..
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~ 99 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehH
Confidence 334455566777777888888877655 45678888999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHH
Q psy195 94 LSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLI 173 (691)
Q Consensus 94 g~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~i 173 (691)
|+++..+..+++.++.. + ..+.+..++.|..+|.-.|+....++.+|+ +++||+..++++.+-|+|+++
T Consensus 100 gLilsai~nil~Gfs~s--~-----~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfs----r~eRG~~~siWn~shNiGGal 168 (448)
T COG2271 100 GLILSAIVNILFGFSPS--L-----FLFAVLWVLNGWFQGMGWPPCARTITHWFS----RKERGTWWSIWNTSHNIGGAL 168 (448)
T ss_pred HHHHHHHHHHHHhhhhH--H-----HHHHHHHHHHHHHhcCCCcHHHHHHHHHcC----ccccCceEEEehhhhhcccch
Confidence 99999998888887642 1 778888889999999999999999999998 899999999999999999999
Q ss_pred HHHHH--HHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 174 STFIT--PIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 174 gp~i~--~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
.|.+. +++.. +.+||.+|++++++.++..++.+..
T Consensus 169 ~~~~~~la~~~~-------~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 169 APLVALLAFFAF-------HGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHHHHHHHHHHh-------ccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99988 77665 4689999999998766555444433
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.66 E-value=1.9e-13 Score=152.06 Aligned_cols=141 Identities=11% Similarity=0.057 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCch-hHHHHHHHHHHHHHHHHHH
Q psy195 28 INEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGK-FLTIVILSIVYLGGNVLLT 106 (691)
Q Consensus 28 ~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGR-kk~i~ig~il~~ig~ill~ 106 (691)
+..++...++-...+.++.|+.+++|++..+.|++.+.+.++..+++++.|.++||+ || |+++.++.++..++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHH
Confidence 334444445545668899999999999999999999999999999999999999997 76 6677777766666655555
Q ss_pred HhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCC----cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 107 VTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIV----PEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 107 ~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~----~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
.... . +.+++.|++.+++.+...+...++..+...+ ......|.+.++ .+|.++||.+++.+.
T Consensus 88 ~~~~--~-----~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~ 154 (418)
T TIGR00889 88 QVTT--P-----AGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLD 154 (418)
T ss_pred HhcC--H-----HHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhc
Confidence 4321 1 5667788888887766655544432111100 011122334444 467888888888763
No 80
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.65 E-value=7e-14 Score=155.38 Aligned_cols=176 Identities=17% Similarity=0.130 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHh----cCchhH-HHHHHHHHHHHHHHHHH
Q psy195 32 CERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADT----YLGKFL-TIVILSIVYLGGNVLLT 106 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr----~lGRkk-~i~ig~il~~ig~ill~ 106 (691)
...+.+..+.++++.|+++.+|+++.++|.+.++..+...+..|+.|+++|| + |||| .++++.++..++.+++.
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~-Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRW-GKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCC-CCcchhHHHhHHHHHHHHHHHH
Confidence 3344555666789999999999999999999999999999999999999998 5 8855 56677777777766665
Q ss_pred HhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy195 107 VTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDM 185 (691)
Q Consensus 107 ~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~ 185 (691)
.. |....... ..+++.+++.+++.+....+..++.+|..+ ++++|++..++...+.++|..+++.+.+.+....
T Consensus 89 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~---~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~ 163 (437)
T TIGR00792 89 TT--PDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITL---DPRERESLSTFRRFGATLGGLLVAVIVLPLVSYF 163 (437)
T ss_pred hC--CCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 22111111 455667777888888887788888888653 4688999999999988998887777655443211
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 186 QCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 186 ~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
+..+...+|+..+.+.+++.++..++..
T Consensus 164 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 191 (437)
T TIGR00792 164 GGGDDKFGWFMFALVLALIGVVSLIICF 191 (437)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 0000135799888877766555544433
No 81
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.64 E-value=1.4e-12 Score=148.10 Aligned_cols=171 Identities=14% Similarity=0.112 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhc----CchhHH-HHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTY----LGKFLT-IVILSIV 97 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~----lGRkk~-i~ig~il 97 (691)
.+.++...+......+...+.++.++.+ .|.+..+.|... ..... +++.++.|.++||+ +||||. +.++.++
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~ 90 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLL 90 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHH
Confidence 3334444455566666667778888764 599999999863 22222 36889999999994 288886 5566555
Q ss_pred HHHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 98 ~~ig~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
..++...+++.. ..++ +.+.+.+++.+++.+...+...++.+|++| +++|+++.++...+.++|.++++.
T Consensus 91 ~~~~~~~~a~~~~~~~l-----~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~----~~~rg~~~~i~~~g~~lG~llg~~ 161 (491)
T PRK11010 91 LLVAIAAMGFLEPGTQL-----RWLAALAVVIAFCSASQDIVFDAWKTDVLP----AEERGAGAAISVLGYRLAMLVSGG 161 (491)
T ss_pred HHHHHHHHHHcCCcchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 555555554431 1111 567778889999999999999999999987 889999999999999999999999
Q ss_pred HHHHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 177 ITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
+..++.+. ..|||..|++.+++.++..+.
T Consensus 162 l~~~l~~~------~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 162 LALWLADR------YLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHhc------ccCHHHHHHHHHHHHHHHHHH
Confidence 88887651 257999999877765555443
No 82
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.63 E-value=1e-12 Score=146.02 Aligned_cols=178 Identities=13% Similarity=0.090 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
++.+....+...+.+....+.+ ..+++++|++..++|++.+.+.++..++++++|++.||+ |||+++.++.+++.++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~-~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMV-PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 4444444444454543333444 455789999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 103 VLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 103 ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
+++..+. .+++ +.++++|++.|+|.|...+..++++.+..| +++|++..+..+...++|..+||.+++.+
T Consensus 83 ~l~~~~~~~~~~-----~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 83 FLFWPAAEIMNY-----TLFLVGLFILTAGLGFLETAANPYILVMGP----ESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHhhccH-----HHHHHHHHHHHhhHHHHHhhhhHHHHHHCC----HhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765432 2222 778899999999999999999999999665 77889999999999999999999998876
Q ss_pred hccc-ccc------------------CCCCchhHHHHHHHHHHHHHHHH
Q psy195 182 RHDM-QCF------------------GQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 182 ~~~~-~~~------------------g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
.... ... +...+||.+|.+.+++.++..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 154 ILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4310 000 00135999998777655544433
No 83
>KOG1330|consensus
Probab=99.62 E-value=5e-15 Score=160.18 Aligned_cols=181 Identities=12% Similarity=0.153 Sum_probs=152.3
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHH
Q psy195 16 QPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILS 95 (691)
Q Consensus 16 ~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~ 95 (691)
.+...+.+..++++++.+++--|.+.. ...=.++.+|.+++..|++...+.++..+++|++|+++||| .|++++.+|.
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~ 105 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGI 105 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHH
Confidence 334455666777777777777775544 33345667999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q psy195 96 IVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIST 175 (691)
Q Consensus 96 il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp 175 (691)
.++.+++++.+++... +.+.+.|.+.|+|.+.+.|..+++++|.|| ..+|++.++++|+++++|+.+|.
T Consensus 106 ~iW~~Av~~~~fs~~F-------wq~~l~R~~vGiGeAs~~~ia~s~IaD~f~----~~~Rs~~~~ify~~ipvGsglG~ 174 (493)
T KOG1330|consen 106 FIWTLAVFASGFSNHF-------WQVLLCRGFVGIGEASYSPIAPSLIADSFP----DDKRSRVLGIFYFAIPVGSGLGY 174 (493)
T ss_pred HHHHHHHHHHHHHHHH-------HHHHHHHHHhccchhhhcccchhHhhhcCc----chhhhHHHHHhhhhcccccceeE
Confidence 9999999988887422 899999999999999999999999999998 89999999999999999999999
Q ss_pred HHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 176 FITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 176 ~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
.++..+.+. +..||++|...+++.++.+++..+.
T Consensus 175 vvgs~va~~------~~~Wr~af~~~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 175 VVGSVVASL------TFWWRWAFRGSAVLGVIVGLLVFLF 208 (493)
T ss_pred EeeeeeccC------ccceEEEEEeehHHHHHHHHHHHhh
Confidence 988887663 3349999999888876665554443
No 84
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.61 E-value=2.4e-13 Score=147.12 Aligned_cols=148 Identities=15% Similarity=0.140 Sum_probs=118.7
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH
Q psy195 41 RTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTF 120 (691)
Q Consensus 41 ~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~ 120 (691)
.+.+| .+.+++|++..++|++.+.+.++..++.++.|+++||+ ||||++.++.++..++.++. .. ++. ..
T Consensus 20 ~~~lp-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~--~~~-----~~ 89 (355)
T TIGR00896 20 GPLLP-QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA--PGT-----AL 89 (355)
T ss_pred cccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh--ccH-----HH
Confidence 34444 45678999999999999999999999999999999998 99999999988877776655 32 212 67
Q ss_pred HHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHH
Q psy195 121 TLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGV 200 (691)
Q Consensus 121 l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i 200 (691)
++++|++.|+|.+...+..+.+..|.+| ++|+++.++++.+.++|..+++.+.+.+.+. . ..+|+..|.+
T Consensus 90 l~~~~~~~g~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~---~--~~~w~~~f~~ 159 (355)
T TIGR00896 90 LFAGTALIGVGIAIINVLLPSLIKRDFP-----QRVGLMTGLYSMALMGGAALAAAATVPLAQH---S--GGHWQQALAW 159 (355)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHhCc-----chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---h--hhhHHHHHHH
Confidence 7899999999999988888888888764 4789999999999999999999988877652 0 1248888876
Q ss_pred HHHHHHHH
Q psy195 201 PALLMFLA 208 (691)
Q Consensus 201 ~~~l~~l~ 208 (691)
.++..++.
T Consensus 160 ~~~~~~~~ 167 (355)
T TIGR00896 160 WALPALLA 167 (355)
T ss_pred HHHHHHHH
Confidence 65544433
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.61 E-value=7e-13 Score=143.46 Aligned_cols=158 Identities=15% Similarity=0.120 Sum_probs=109.9
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhc----CchhHHH-HHHHHHHHHHHHHHHHhhcCCCCCch
Q psy195 43 VLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTY----LGKFLTI-VILSIVYLGGNVLLTVTAIDPLNIPK 117 (691)
Q Consensus 43 ~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~----lGRkk~i-~ig~il~~ig~ill~~s~~~~~~~~~ 117 (691)
.+|.++ +++|+|.++.|..... .+...+ .++.|.++||+ +||||.+ +.+.++..+.+..+++.. + . ..
T Consensus 10 ~~~~~~-~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~-~-~--~~ 82 (356)
T TIGR00901 10 TLPYWL-RSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV-P-S--TD 82 (356)
T ss_pred HHHHHH-HHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC-c-c--hh
Confidence 455554 5789999999998655 343444 88999999996 4899975 555555555544444321 1 0 00
Q ss_pred hHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cCCCCchhH
Q psy195 118 RTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQC-FGQEACFPL 196 (691)
Q Consensus 118 ~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~-~g~~~~w~~ 196 (691)
.+.+.+..++.+++.+...+...++++|++| +++|+++.++...+.++|.++++.+++.+....++ .....+||.
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILS----DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 0445555666778888888999999999887 89999999999999999999999999877652100 000123999
Q ss_pred HHHHHHHHHHHHHHH
Q psy195 197 AFGVPALLMFLAIIV 211 (691)
Q Consensus 197 ~F~i~~~l~~l~~l~ 211 (691)
.|.+.++..+++.++
T Consensus 159 ~f~i~ai~~l~~~~~ 173 (356)
T TIGR00901 159 IFFWTALLILPGLLV 173 (356)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998877766555444
No 86
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.60 E-value=3.5e-13 Score=157.42 Aligned_cols=190 Identities=13% Similarity=0.086 Sum_probs=142.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
+|.+.+.+....+....+.+........+.++++++..+.|++.+.+.++..++.++.|+++||+ ||+|.+.+|++++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 44443333333333334445555556667788999999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHHhhcC--CCC---------------------C-----------------c--h-h-HHHHHHHHHHHHHhhch
Q psy195 100 GGNVLLTVTAID--PLN---------------------I-----------------P--K-R-TFTLVGLLLIAVGTGGI 135 (691)
Q Consensus 100 ig~ill~~s~~~--~~~---------------------~-----------------~--~-~-~~l~i~~~l~gig~G~~ 135 (691)
+|.++++++++- .+. . . . . ..++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 999988776310 000 0 0 1 1 56789999999999999
Q ss_pred hhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCC---------------CCchhHHHHH
Q psy195 136 KPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQ---------------EACFPLAFGV 200 (691)
Q Consensus 136 ~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~---------------~~~w~~~F~i 200 (691)
.+...+++.|.+| +++|+...++++.+..+|.++|+.+++++.+...+|+. ..+|+.+|.+
T Consensus 190 ~~~~~~~i~d~~~----~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli 265 (633)
T TIGR00805 190 FPLGISYIDDFAK----SKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLI 265 (633)
T ss_pred hhcCchhhhccCC----ccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 9999999999887 88999999999999999999999999987652211210 0137888888
Q ss_pred HHHHHHHHHHHHHh
Q psy195 201 PALLMFLAIIVFII 214 (691)
Q Consensus 201 ~~~l~~l~~l~~~~ 214 (691)
.+++.++.++.++.
T Consensus 266 ~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 266 CGGVALLTSIPFFF 279 (633)
T ss_pred HHHHHHHHHHHHHh
Confidence 77766655544433
No 87
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.59 E-value=6.3e-13 Score=144.07 Aligned_cols=160 Identities=13% Similarity=0.101 Sum_probs=111.6
Q ss_pred HHHHHHHHhcC--CCHHHHHHHHHH-----HHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy195 43 VLSLYMHLVLL--YDEKTATVMFHI-----WTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNI 115 (691)
Q Consensus 43 ~l~~yl~~~lg--~s~~~ag~i~~~-----~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~ 115 (691)
+...++.++.. .++.+.+.+.+. ..++..+++++.|+++||+ ||||++.++.++..++.++...+.. ...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~--~~~ 90 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPS--YAT 90 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCC--hhh
Confidence 34445555543 344555544432 2233346889999999998 9999999999998888887776521 100
Q ss_pred ch--h-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC-CC
Q psy195 116 PK--R-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFG-QE 191 (691)
Q Consensus 116 ~~--~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g-~~ 191 (691)
.. . ..++++|++.|++.|...+..+++++|.+| +++|++..++...+..+|.++++.+...+........ ..
T Consensus 91 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~ 166 (394)
T TIGR00883 91 IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAP----PGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLE 166 (394)
T ss_pred hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCC----cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhc
Confidence 00 0 357899999999999999999999999887 8889999999999999999999887765432000000 13
Q ss_pred CchhHHHHHHHHHHHHHH
Q psy195 192 ACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 192 ~~w~~~F~i~~~l~~l~~ 209 (691)
.+|+..|.+.+++.+++.
T Consensus 167 ~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 167 WGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 579998887665544443
No 88
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.58 E-value=3e-12 Score=142.93 Aligned_cols=148 Identities=11% Similarity=0.095 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHL-VLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~-~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
|.+++..+. +...+....+.+.+...+.+ ++|+|.++.+++.+++.++..++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~~-f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSC-LLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 444444433 33334444444445556554 7999999999999999999999999999999998 99999999999888
Q ss_pred HHHHHHHHhh---cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTA---IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 100 ig~ill~~s~---~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
+.+++..++. .+++ ..+++.|++.|++ |...+.....++++|| +++||++.++.....|+|..+++.
T Consensus 112 i~~~~~~~a~~~~~~s~-----~~lli~r~l~Gig-g~~f~~~~~~vs~wfp----~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPF-----GIFIVIALLCGFA-GANFASSMGNISFFFP----KAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHHHHHHHHHcccCCCH-----HHHHHHHHHHHHH-HHhHHHHHHHHHHHCC----HhHhHHHHHHHHHHHhhHHHHHHH
Confidence 8888777641 1222 7899999999998 6677888889999998 899999999997777777776666
Q ss_pred HHHH
Q psy195 177 ITPI 180 (691)
Q Consensus 177 i~~~ 180 (691)
+.+.
T Consensus 182 l~p~ 185 (462)
T PRK15034 182 VAPL 185 (462)
T ss_pred HHHH
Confidence 5554
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.58 E-value=3e-11 Score=133.38 Aligned_cols=162 Identities=12% Similarity=0.076 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhc----CchhH-HHHHHHHHHHHHHHHH
Q psy195 31 FCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTY----LGKFL-TIVILSIVYLGGNVLL 105 (691)
Q Consensus 31 ~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~----lGRkk-~i~ig~il~~ig~ill 105 (691)
+.....+.-....+|.|+.+ .|++.++.|++..+... .+..++.|+++||+ +|||| .+.++.++..+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 33444455556779999985 59999999998766655 69999999999995 16766 6777777766666665
Q ss_pred HHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy195 106 TVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHD 184 (691)
Q Consensus 106 ~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~ 184 (691)
.+.. ...+ +.+++..++.++..+...+...++++|.+| +++|+++.++...+.++|..+++.+.+.+.+.
T Consensus 86 ~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~al~~~~~~----~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 86 AFCPPHAAL-----WPLAGLAVLVAFLSASQDIVFDAYSTDVLH----PEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HhcCccchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 5431 1111 445566666778888888999999999887 88899999999999999999999988887652
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 185 MQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 185 ~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
..+||..|.+.+++.++..+
T Consensus 157 ------~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 157 ------VLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred ------ccCHHHHHHHHHHHHHHHHH
Confidence 24799999987776554443
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.52 E-value=1e-10 Score=131.52 Aligned_cols=193 Identities=11% Similarity=0.088 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhH----hcCchhHHHHHH-HH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIAD----TYLGKFLTIVIL-SI 96 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaD----r~lGRkk~i~ig-~i 96 (691)
.+..+....+...+++-...++++.|+ +.+|.+...++.+..+..+...+..|+.|+++| |+ ||||.++++ .+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHH
Confidence 344444455555667666667777776 579999999999999999999999999999999 57 999998875 55
Q ss_pred HHHHHHHHHHHhhcCC------CCCchh----HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHH
Q psy195 97 VYLGGNVLLTVTAIDP------LNIPKR----TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFS 166 (691)
Q Consensus 97 l~~ig~ill~~s~~~~------~~~~~~----~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~ 166 (691)
...++.++++.+.... ...... ..+.++..+..++.....++..++++|.+| .++++++.+.++....
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p--~~~~~~~~a~~~~~~~ 160 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTG--GDARRTRIANAYFSFF 160 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--chhHHHHHHHHHHHHH
Confidence 5555555555432100 000000 234555556667888888899999999886 2222346899999999
Q ss_pred HHHHHHHHHHHHHHhh--ccccc----cCCC--CchhHHHHHHHHHHHHHHHHHHhhccc
Q psy195 167 INAGSLISTFITPIFR--HDMQC----FGQE--ACFPLAFGVPALLMFLAIIVFIIGKPM 218 (691)
Q Consensus 167 ~nlG~~igp~i~~~l~--~~~~~----~g~~--~~w~~~F~i~~~l~~l~~l~~~~~~~~ 218 (691)
.++|.++|+.++++.. ..... ..+. .+.+..|.+.++++++..++.....++
T Consensus 161 ~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E 220 (477)
T TIGR01301 161 MAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKE 220 (477)
T ss_pred HHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 9999999999888642 10000 0000 256789998887777776665554443
No 91
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.51 E-value=1.4e-11 Score=132.59 Aligned_cols=183 Identities=12% Similarity=0.106 Sum_probs=144.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHH
Q psy195 19 YPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVY 98 (691)
Q Consensus 19 ~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~ 98 (691)
++|.+++-.+. +...+..+.+.+.+..++.+++|+|+.|.++++++-.+...+..++-|.+.||+ |.|++..++.++.
T Consensus 12 ~~~~L~~S~~a-f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLWLSTLA-FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLL 89 (417)
T ss_pred hhHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHH
Confidence 45555554443 333455556777788888999999999999999999999999999999999998 9999999898888
Q ss_pred HHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 99 LGGNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 99 ~ig~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
.+-++.++++. .++. +.+++..++.|++.|.+ +...++.+.+|| ++++|.+.+++. ..|+|..+...+
T Consensus 90 ~IP~~~~~~a~~~~~~-----~~ll~~gll~G~~GasF-av~m~~~s~~fP----~~~qG~AlGI~g-~GN~G~av~q~~ 158 (417)
T COG2223 90 LIPCLGLAFAVTYPST-----WQLLVIGLLLGLAGASF-AVGMPNASFFFP----KEKQGLALGIAG-AGNLGVAVAQLV 158 (417)
T ss_pred HHHHHHHHHHccCCch-----HHHHHHHHHHhccccee-hcccccccccCC----hhhhhHHHHHhc-cccccHHHHHHH
Confidence 88777777763 3333 68888899999886665 566777999998 899999999999 889999999999
Q ss_pred HHHhhccccccCCCCc---hhHHHHHHHHHHHHHHHHHHhhcccccc
Q psy195 178 TPIFRHDMQCFGQEAC---FPLAFGVPALLMFLAIIVFIIGKPMYKI 221 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~---w~~~F~i~~~l~~l~~l~~~~~~~~~~~ 221 (691)
++.+.. ..+ |+..-.+..+.+++..+.+++..+..++
T Consensus 159 ~P~v~~-------~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~ 198 (417)
T COG2223 159 APLVAV-------AFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPE 198 (417)
T ss_pred HHHHHH-------HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 998876 345 8877777777777766666666554433
No 92
>KOG0255|consensus
Probab=99.50 E-value=1.2e-11 Score=141.52 Aligned_cols=154 Identities=11% Similarity=0.064 Sum_probs=125.0
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q psy195 50 LVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIA 129 (691)
Q Consensus 50 ~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~g 129 (691)
+..+.+.....+..+++.+|..+|+++.|.++|++ |||++++++.++.+++.++.+++. ++ ..+.+.|++.|
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~--~~-----~~~~~~Rfl~G 182 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP--NY-----WMFLIFRFLSG 182 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC--cH-----HHHHHHHHHHH
Confidence 45678888999999999999999999999999996 999999999999999888777763 23 88999999999
Q ss_pred HHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHH
Q psy195 130 VGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 130 ig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
++.++...+...+++|.++ ++.|+.+.++ ......|+.+++..++++.. +||+.+++..+..++.+
T Consensus 183 ~~~~~~~~~~~~~~~E~~~----~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---------~Wr~~~~~~~~~~~~~~ 248 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVS----PKQRGLALTL-GGFFFVGGLMLPAGAAYITR---------DWRWLFWIISIPSGLFL 248 (521)
T ss_pred hhccchhHHhHhhheeecC----cchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---------hHHHHHHHHHHHHHHHH
Confidence 9999999999999999887 8999999999 66777777778887777754 49998888766555443
Q ss_pred HH-HHh-hcccccccCCC
Q psy195 210 IV-FII-GKPMYKINKPK 225 (691)
Q Consensus 210 l~-~~~-~~~~~~~~~~~ 225 (691)
+. ++. ..+++...+.+
T Consensus 249 ~~~~l~~Es~rwl~~~g~ 266 (521)
T KOG0255|consen 249 LLWFLPPESPRWLLSKGR 266 (521)
T ss_pred HHHHccCcChHHHHHcCc
Confidence 33 233 45555544433
No 93
>PRK09848 glucuronide transporter; Provisional
Probab=99.48 E-value=3.5e-11 Score=134.89 Aligned_cols=148 Identities=14% Similarity=0.101 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhc---CchhHHH-HHHHHHHHHHHH
Q psy195 28 INEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTY---LGKFLTI-VILSIVYLGGNV 103 (691)
Q Consensus 28 ~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~---lGRkk~i-~ig~il~~ig~i 103 (691)
+..+....++....++++.|+++.+|++..++|.+.+...+...+..++.|+++||. .||||.. .++.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 345555666666778888999999999999999999999999999999999999994 2777754 555554444443
Q ss_pred HHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHH-----HHHHHHHHH
Q psy195 104 LLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSIN-----AGSLISTFI 177 (691)
Q Consensus 104 ll~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~n-----lG~~igp~i 177 (691)
++.... ........ ...++..++.+++.+...++..++..+..+ ++++|.+..++..++.+ +|..++|.+
T Consensus 95 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~---~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i 170 (448)
T PRK09848 95 LVFWVP-TDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQ---QPQSRARLGAARGIAASLTFVCLAFLIGPSI 170 (448)
T ss_pred HHHhCc-CCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332111 01111111 334455567788888888877887776554 45678888777665433 455555555
Q ss_pred HH
Q psy195 178 TP 179 (691)
Q Consensus 178 ~~ 179 (691)
.+
T Consensus 171 ~~ 172 (448)
T PRK09848 171 KN 172 (448)
T ss_pred HH
Confidence 54
No 94
>KOG0252|consensus
Probab=99.47 E-value=4.9e-13 Score=144.30 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=92.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc-hh-HHHHHHHHHHHH
Q psy195 53 LYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIP-KR-TFTLVGLLLIAV 130 (691)
Q Consensus 53 g~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~-~~-~~l~i~~~l~gi 130 (691)
+++....+.+..+..++..+++++.||++|++ |||++....+++.++++++.+++.. ...+ +. ..+...|+++|+
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~--~~~~~~~m~~L~~~R~~LGi 156 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVG--TTSPLGVMMTLCFFRFLLGI 156 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCC--CCCCcchhhHHHHHHHHhhc
Confidence 37788899999999999999999999999998 9999999999999998885555411 1111 22 778899999999
Q ss_pred HhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 131 GTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 131 g~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
|.|+-.|...+..+| -+..++||...++......+|.+.|..
T Consensus 157 GIGGDYPlSAtI~SE----~an~~~RGa~iaavFa~Qg~GilaG~i 198 (538)
T KOG0252|consen 157 GIGGDYPLSATIMSE----SANKKTRGAFIAAVFAMQGFGILAGGI 198 (538)
T ss_pred cccCCCcchHHHhhh----hhhhccccceeEEEEEecchhHhhccH
Confidence 999999999999999 555888888776655544444444433
No 95
>PRK09669 putative symporter YagG; Provisional
Probab=99.45 E-value=4.3e-11 Score=134.09 Aligned_cols=176 Identities=14% Similarity=0.099 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHh----cCchhH-HHHHHHHHHHHHHH
Q psy195 29 NEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADT----YLGKFL-TIVILSIVYLGGNV 103 (691)
Q Consensus 29 ~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr----~lGRkk-~i~ig~il~~ig~i 103 (691)
..+.....+..+..+++.|+++.+|+|...+|.+..+..+...+..|+.|+++|| + |||| .++++.+...++.+
T Consensus 17 g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 17 GDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHHHHHH
Confidence 3344455555667789999999999999999999999999999999999999999 6 8755 45566666666655
Q ss_pred HHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 104 LLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 104 ll~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
++.. .|....... ..+++..++.+.+..+...+..++.+|+.+ ++++|++..++.....++|..+++.+...+.
T Consensus 96 l~f~--~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~---~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 96 LTFY--TPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITN---DPRERHSLQSWRFALSFIGGLIVSVIALPLV 170 (444)
T ss_pred HHHh--CCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 232221122 445555566677777777778888988764 4678999999999999999888877554333
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 183 HDMQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 183 ~~~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
...+..+...+|+..+.+.+++.++..+
T Consensus 171 ~~~~~~~~~~g~~~~~~i~~ii~~v~~~ 198 (444)
T PRK09669 171 DILGKGDEQKGYFYAMMVMGLLGVVLFF 198 (444)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 2110000124677666665555444433
No 96
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.45 E-value=4.3e-11 Score=135.33 Aligned_cols=145 Identities=14% Similarity=0.041 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhH----hcCch-hHHHHHHHHHHHHHHH
Q psy195 29 NEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIAD----TYLGK-FLTIVILSIVYLGGNV 103 (691)
Q Consensus 29 ~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaD----r~lGR-kk~i~ig~il~~ig~i 103 (691)
..+...+.+..+.++++.|+++.+|+++..+|.+..+..+...+..|+.|+++| |+ || |+-++++.+...++..
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVLF 92 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHHH
Confidence 344556666677788999999999999999999999999999999999999999 76 98 5556667776666665
Q ss_pred HHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 104 LLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 104 ll~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++... |....... ..+++..++.+++......+..++.+|..+ ++++|.+..++.....++|+.+.+.+..
T Consensus 93 llf~~--p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~---~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 93 LLFSA--HLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTL---DKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHcC--CCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55432 22211111 344455566678888888888888888653 5889999999978888888666655544
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.42 E-value=1.1e-09 Score=121.28 Aligned_cols=135 Identities=17% Similarity=0.149 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHH
Q psy195 28 INEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTV 107 (691)
Q Consensus 28 ~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~ 107 (691)
...++..+.+-...++++.|+++ .|+|..+.|.+.++..+...+++++.|+++||...+||.+.+..++..+...+...
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555667889999975 78999999999999999999999999999999834667766655554444333333
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 108 TAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 108 s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
...+ +.+++..++..+......|...++..+... +++.-++...+..++|..++.+
T Consensus 88 ~~~f-------~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~------~~~~~YG~iRlwGSiGf~~~~~ 143 (400)
T PF03825_consen 88 SSSF-------WWLFVIMLLFSFFFSPTMPLSDSIALSYLG------DRGKDYGRIRLWGSIGFIVAAL 143 (400)
T ss_pred hccH-------HHHHHHHHHHHHHHccHHHHHHHHHHHHcc------cccCCCCcchhhhhHHHHHHHH
Confidence 2221 445555566666666655665555555332 2333444455555666665544
No 98
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.42 E-value=7.6e-11 Score=131.45 Aligned_cols=180 Identities=13% Similarity=0.096 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhH----hcCchhHHH-HHHHHHHHHHHHHH
Q psy195 31 FCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIAD----TYLGKFLTI-VILSIVYLGGNVLL 105 (691)
Q Consensus 31 ~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaD----r~lGRkk~i-~ig~il~~ig~ill 105 (691)
+...+.+.....+++.|+++.+|+++..+|.+..+..+...+..|+.|+++| |+ ||||.. ++|.++..++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 3334444455567889999999999999999999999999999999999999 87 977755 45777777777666
Q ss_pred HHhhcC-CCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 106 TVTAID-PLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 106 ~~s~~~-~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
... .| ....... ..+.+..++..++......+..++.+|..+ ++++|.+..++...+..+|.++...+.+.+.+
T Consensus 90 f~~-~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~---~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~ 165 (428)
T PF13347_consen 90 FSP-PPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTP---DPDERTRLSSWRMIFSMIGSLLASFLAPILVS 165 (428)
T ss_pred hcc-ccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccc---cHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 543 11 1111111 344666677788899998999999999765 46789999999999999998777776665543
Q ss_pred cccccCCC-CchhHHHHHHHHHHHHHHHHHHhhc
Q psy195 184 DMQCFGQE-ACFPLAFGVPALLMFLAIIVFIIGK 216 (691)
Q Consensus 184 ~~~~~g~~-~~w~~~F~i~~~l~~l~~l~~~~~~ 216 (691)
..+. +.. .+|+....+.+++.++..++.....
T Consensus 166 ~~g~-~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ 198 (428)
T PF13347_consen 166 WFGG-GDTSNGYRWMALVLAIVGLVFFLITFFFV 198 (428)
T ss_pred hhcc-CccchHHHHHHHHHHHHHHHHhhhhhhee
Confidence 2110 001 2688777766665555554444443
No 99
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.40 E-value=2.2e-11 Score=134.44 Aligned_cols=151 Identities=10% Similarity=0.062 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q psy195 40 MRTVLSLYMHLVLLYDEKT-ATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKR 118 (691)
Q Consensus 40 i~~~l~~yl~~~lg~s~~~-ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~ 118 (691)
..++...|+.+++|++..+ .|.+.+++..+..++.+++|+++||+ |.|+++.++.+...+..+++.++...
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~Sl------- 115 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGTSV------- 115 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 3455777888999999999 99999999999999999999999997 99999999999999988888876321
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhH--
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPL-- 196 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~-- 196 (691)
..+.+.|++.|++.|... +...+++.++| +++|+++.++...+.++|.++++.+++++.. .+|+.
T Consensus 116 ~~L~i~R~llGvaEA~~~-A~~syI~~WfP----~kER~ratsi~~sg~~vG~~Ia~~L~qll~s--------~gWr~y~ 182 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARI-AYSSYIFSLVP----PSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT--------LGWISYS 182 (511)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCchhHH
Confidence 789999999999999998 99999999998 9999999999999999999999999998432 45763
Q ss_pred -HHHHHHHHHHHHHHH
Q psy195 197 -AFGVPALLMFLAIIV 211 (691)
Q Consensus 197 -~F~i~~~l~~l~~l~ 211 (691)
..++..+...+++++
T Consensus 183 ~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 183 TLNIISLVFMTFSVFL 198 (511)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 444444444444443
No 100
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.35 E-value=2.7e-09 Score=114.52 Aligned_cols=134 Identities=16% Similarity=0.190 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh-cCCCCCchh
Q psy195 40 MRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA-IDPLNIPKR 118 (691)
Q Consensus 40 i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~-~~~~~~~~~ 118 (691)
....+...+++.++++..+++++...+..+..+.+++.|++.+|+ |+|+.+.+|+.++.+|+.++.-++ ...+
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~~~~y----- 104 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAASSKSY----- 104 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhhhhhH-----
Confidence 444577788889999999999999999999999999999999997 999999999999999998876442 2222
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
.++++++++++.|.|...+..+++++...+ ++.-.+-.+..+....+|+++||+++.++..
T Consensus 105 ~~FL~~lFila~Gi~~LetaaNp~v~~lg~----~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 105 GFFLVALFILASGIGLLETAANPYVTLLGK----PESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHHhhhHHHHhccchHHHHhCC----chhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 788999999999999999999999999887 4444555777888899999999999987654
No 101
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.35 E-value=6.3e-11 Score=134.57 Aligned_cols=153 Identities=12% Similarity=0.142 Sum_probs=114.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+.+...+...++....+|++..++|.|+++.+|++..+++.+.....++..++.+++|+++||+ |||+++.++.++..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~ 328 (490)
T PRK10642 250 RSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALFV 328 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence 3333333334455678888889999999888999999888888888899999999999999998 999999888765444
Q ss_pred HHHH-HHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVL-LTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 101 g~il-l~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
+.+. +......+. ..+++++++.+++.+...+..+++..+.+| ++.|+++.++.+....+++.++|.+.+
T Consensus 329 ~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p----~~~Rg~~~g~~~~~~~~~g~~~p~i~g 399 (490)
T PRK10642 329 LAIPAFILINSNVI-----GLIFAGLLMLAVILNCFTGVMASTLPAMFP----THIRYSALAAAFNISVLVAGLTPTLAA 399 (490)
T ss_pred HHHHHHHHHhCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 221111111 566778888888877777778888889888 888999999755556666778888888
Q ss_pred Hhhc
Q psy195 180 IFRH 183 (691)
Q Consensus 180 ~l~~ 183 (691)
++.+
T Consensus 400 ~l~~ 403 (490)
T PRK10642 400 WLVE 403 (490)
T ss_pred HHHH
Confidence 8765
No 102
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=4.1e-09 Score=115.81 Aligned_cols=176 Identities=8% Similarity=-0.043 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH--HHHHHHHHHHhHHHH-HHHhHhcCchhHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVM--FHIWTGLCYFFPLFG-GIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i--~~~~~i~~~i~~l~~-G~LaDr~lGRkk~i~ig~il~~ 99 (691)
+..+....+.+...+....+.+|.|+++ .|.|..+.|.. .+...+...+.+++. ++.+||+ ||||..++++.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 3444555566677777777889999864 69999999997 355566666666666 6689997 99999766653322
Q ss_pred H-HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 G-GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 100 i-g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
. ....+... .+.. .....+....++.++..+...+...++..|..+ +++++...+....+..+|.++|+.+.
T Consensus 81 ~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~----~~~~~~~~~~~~~g~~lG~~~g~~~~ 153 (390)
T TIGR02718 81 SACLASLALV-GPDV--AGAGWAVGLLACASLASATQDIATDGMAAEHFN----GRTLAKGNAVQIAGVMIGFFGGGAGT 153 (390)
T ss_pred HHHHHHHHcC-Ccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----HhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2 12212211 0100 000223333444555566666666666677554 66777777777777788999998888
Q ss_pred HHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
+++.+ ..+|+..|++.+++.++..+..+.
T Consensus 154 ~~l~~-------~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 154 LVLFG-------KFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHH-------HhCHHHHHHHHHHHHHHHHHHHHH
Confidence 87776 468999999888776655544333
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.34 E-value=9.7e-10 Score=124.27 Aligned_cols=173 Identities=18% Similarity=0.144 Sum_probs=123.8
Q ss_pred chHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCc-----hhHHHHH
Q psy195 20 PKAVF-FIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLG-----KFLTIVI 93 (691)
Q Consensus 20 ~r~~~-~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lG-----Rkk~i~i 93 (691)
++..+ .+....+..... +.+...++.++++++|++.++.+...+...+...+-++ .|.++|++ + ||+.+.+
T Consensus 24 ~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~ 100 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVL 100 (468)
T ss_pred cchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHH
Confidence 44333 333355666666 66667788889989999999999998888888888665 99999998 8 7777777
Q ss_pred HHHHHH-HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHH
Q psy195 94 LSIVYL-GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSL 172 (691)
Q Consensus 94 g~il~~-ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~ 172 (691)
+.++.. ++...++. .++. .....+.+++.+++.+......-++..|+.+ ++++.++...++.+.+.++|.+
T Consensus 101 ~~~l~~~~~~~~l~~--~~~~----~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~--~~~~~~~~~~s~~~~~~~~G~~ 172 (468)
T TIGR00788 101 SGLLGSAILYGLLPG--KVSS----AKVAAAFIFLAALAKALYDVLVDSLYSERIR--ESPSAGPSLVSWMWGASATGGL 172 (468)
T ss_pred HHHHHHHHHHHhccc--ccch----HHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh--cCCCcCCCeeeHHHHHHHHHHH
Confidence 766542 22222221 1111 0333347788899999999999999999885 2334445566777777889999
Q ss_pred HHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 173 ISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 173 igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
+|+.+++.+.+ ..+|+..|++.+++.++..+
T Consensus 173 vg~~l~G~l~~-------~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 173 ISSLLGGPLLD-------KTLTRILFLITAALLLLQLF 203 (468)
T ss_pred HHHHHHHHHHH-------hcCcchHHHHHHHHHHHHHH
Confidence 99999998876 46799999887776665533
No 104
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.34 E-value=1.2e-10 Score=128.37 Aligned_cols=178 Identities=15% Similarity=0.073 Sum_probs=129.3
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHH
Q psy195 16 QPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILS 95 (691)
Q Consensus 16 ~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~ 95 (691)
.+++++..+..+...+.....++....++|.|+++++|++..+++.+.+...++..++.+++|+++||+ |||+.+..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~ 289 (393)
T PRK15011 211 PRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAA 289 (393)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHH
Confidence 344445444444444444444445556789999999999999999988887888888999999999998 9999888776
Q ss_pred HHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q psy195 96 IVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIST 175 (691)
Q Consensus 96 il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp 175 (691)
+...+....+.....+ ..+.+.+++.+++.|...+..+++..|.+| ++|+++.++++...++|..+++
T Consensus 290 ~~~~~~~~~~~~~~~~-------~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-----~~~g~~~~~~~~~~~lg~~~g~ 357 (393)
T PRK15011 290 VAGVCFYAGMLMAHSP-------AILLGLQLLNAIYIGILGGIGMLYFQDLMP-----GQAGSATTLYTNTSRVGWIIAG 357 (393)
T ss_pred HHHHHHHHHHHHHhhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCcchHHHHHHHHHHHHHHHHH
Confidence 5554443333222211 455667777777777776777777888775 3588999998888999999999
Q ss_pred HHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 176 FITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 176 ~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
.+++.+.+ ..+|+..|.+..++.+++++..+
T Consensus 358 ~l~G~i~~-------~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 358 SLAGIVAE-------IWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHH-------HhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999877 45799888877766666554443
No 105
>KOG2533|consensus
Probab=99.33 E-value=5.6e-10 Score=125.92 Aligned_cols=155 Identities=14% Similarity=0.077 Sum_probs=122.0
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q psy195 50 LVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIA 129 (691)
Q Consensus 50 ~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~g 129 (691)
+++|+...+-+.+.++|.++..++.+++|+|.||+ +-.+.+....++..+-.++.... .+. +.+++.|++.|
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~--~s~-----~~~ialr~llG 145 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV--HSF-----PGLIALRFLLG 145 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH--hhh-----HHHHHHHHHHH
Confidence 56788889999999999999999999999999997 86666655555444433333222 222 78899999999
Q ss_pred HHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHH
Q psy195 130 VGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 130 ig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
+.+++..|+...+++.+|. +++|+.-+++++...++|.++|.++++.+.+..+..+ ..||++.|.+.+++.+...
T Consensus 146 l~es~~wP~~~~~lg~wy~----~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~-~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 146 LFESGGWPGVVAILGNWYG----KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG-LAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHhcccchHHHHHHHhhcC----hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC-cCCceeehhHHHHHHHHHH
Confidence 9999999999999999998 8999999999999999999999999887543111111 5789999999998877666
Q ss_pred HHHHhhcc
Q psy195 210 IVFIIGKP 217 (691)
Q Consensus 210 l~~~~~~~ 217 (691)
++.++..|
T Consensus 221 i~~f~~lp 228 (495)
T KOG2533|consen 221 IVVFFFLP 228 (495)
T ss_pred heEEEEec
Confidence 55444433
No 106
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.30 E-value=1.5e-10 Score=130.68 Aligned_cols=183 Identities=10% Similarity=0.027 Sum_probs=128.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+.+|.+.+..++....+++...++|.|+++.+|++..+++...+...++..++.+++|+++||+ |||+.+.++..+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 3466666666777777778888999999999999999999999999999999999999999997 999887665444443
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHH-HHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINA-GSLISTFITP 179 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nl-G~~igp~i~~ 179 (691)
+..+.......+. ....+.+++.|++.............|.+| ++.|+++.++.+...++ |.+++|.+.|
T Consensus 337 ~~~~~~~~~~~~~-----~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p----~~~~g~a~gi~~~~g~l~g~~~~~~~~G 407 (467)
T PRK09556 337 IFTLGVYQHATSE-----YMYLASLFALGFLVFGPQLLIGVAAVGFVP----KKAIGVANGIKGTFAYLFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHHhcCcH-----HHHHHHHHHHHHHHhhHHHHHHHHHHhhcc----hhhHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 3322222111111 344566666665443333333456678887 88999999999988886 7789999999
Q ss_pred Hhhcccc-c---cC-CCCchhHHHHHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQ-C---FG-QEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 180 ~l~~~~~-~---~g-~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
++.+... . .+ ...+|+..|.+..+..+++++..+
T Consensus 408 ~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 408 MIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 8876100 0 00 024699999887776666655444
No 107
>KOG3764|consensus
Probab=99.30 E-value=3.2e-11 Score=128.43 Aligned_cols=147 Identities=16% Similarity=0.118 Sum_probs=132.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q psy195 51 VLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAV 130 (691)
Q Consensus 51 ~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gi 130 (691)
.++-+.++.|++.+.+.+...+..++.|.+.||+ |+|-.+++|.+++..+++++++.... ++++++|.++|+
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~sy-------~~l~vAR~LQgv 171 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGNSY-------PMLFVARSLQGV 171 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcchh-------HHHHHHHHHhhh
Confidence 3566788999999999999999999999999997 99999999999999999999987432 889999999999
Q ss_pred HhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 131 GTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 131 g~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
|.+...++-.++++|.|| +.++|++++|....++.+|.++||.+++.+.+ ..|+..+|.+.++++++..+
T Consensus 172 gsA~~~tsglamlAd~f~---~d~er~~vmGialgfislG~lvgPpfGGilYe-------~~Gk~aPFlVL~~v~Lld~~ 241 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFP---EDNERGSVMGIALGFISLGVLVGPPFGGILYE-------FAGKSAPFLVLAIVLLLDGA 241 (464)
T ss_pred hHHHHHhhhHHHHHHHcc---cchhhhHHHHHHHHHHhccceecCCcccchHh-------hcCCcCcHHHHHHHHHHHHH
Confidence 999999999999999998 56779999999999999999999999999988 57899999999988777765
Q ss_pred HHHhh
Q psy195 211 VFIIG 215 (691)
Q Consensus 211 ~~~~~ 215 (691)
+-++.
T Consensus 242 L~l~v 246 (464)
T KOG3764|consen 242 LQLLV 246 (464)
T ss_pred HHHhe
Confidence 54443
No 108
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.29 E-value=2.5e-10 Score=125.53 Aligned_cols=166 Identities=14% Similarity=0.127 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcC
Q psy195 32 CERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAID 111 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~ 111 (691)
+..+++.....+++.|+.+ .|++ .++...+.+.++..++.++.|+++||+ ||||.+.++.++..++.+++.....+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK05122 227 LASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAPSP 302 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhccH
Confidence 3455566666778888764 4663 446667778888889999999999997 99999988887777776665553211
Q ss_pred CCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q psy195 112 PLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQE 191 (691)
Q Consensus 112 ~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~ 191 (691)
..+++++++.|++.+...+.......|.+| +++|++..++++...++|..+++.+.+.+.+ .
T Consensus 303 -------~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-------~ 364 (399)
T PRK05122 303 -------WMALIGAALTGFGFSLVFPALGVEAVKRVP----PQNRGAALGAYSVFLDLSLGITGPLAGLVAS-------W 364 (399)
T ss_pred -------HHHHHHHHHHHHhHHHHHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H
Confidence 556677888999999888887888888776 8999999999999999999999998888876 4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhcccc
Q psy195 192 ACFPLAFGVPALLMFLAIIVFIIGKPMY 219 (691)
Q Consensus 192 ~~w~~~F~i~~~l~~l~~l~~~~~~~~~ 219 (691)
.||+..|.+.+++.+++++..+..+++.
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 365 FGYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 6799999888777777666555444433
No 109
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.29 E-value=5.7e-10 Score=123.06 Aligned_cols=176 Identities=11% Similarity=0.037 Sum_probs=132.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+..+.+.+..++...++++...++|.|+.+ .|++..++|...+.+.++..++.++.|+++||+ |||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 345555555556677888888899999976 799999999999999999999999999999997 999999888777777
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
+.+++...... . .. +..++.|++.|...+.......+.++ +++++++.++..+...+++..++|.+.++
T Consensus 283 ~~~~~~~~~~~-~-----~~--~~~~l~g~g~g~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~~~~~gp~~~G~ 351 (393)
T PRK09705 283 GFCGFIWLPLQ-L-----PV--LWAMVCGLGLGGAFPLCLLLALDHSV---QPAIAGKLVAFMQGIGFIIAGLAPWFSGV 351 (393)
T ss_pred HHHHHHHccch-H-----HH--HHHHHHHHhccchHHHHHHHHHhhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654432110 0 11 22345678888877777777777664 35688999999999999999999999999
Q ss_pred hhccccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 181 FRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 181 l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
+.+. ..+|...|.+.++..+++++.....
T Consensus 352 l~~~------~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 352 LRSI------SGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHH------hCCchHHHHHHHHHHHHHHHHHHHh
Confidence 9873 2347778887776666555544443
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.28 E-value=1e-08 Score=112.51 Aligned_cols=178 Identities=11% Similarity=0.142 Sum_probs=106.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
++++|.+....+...+++-...++++.++++..|++.+++|.+.++..+...+.+|+.|.++||+ |.||-+++...+..
T Consensus 6 ~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILL 84 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHH
Confidence 55777777766666666667789999999998999999999999999999999999999999997 97776554433222
Q ss_pred --HHHHHHH-HhhcCCCCCchhHHHHHHHHHHHHHhhchh-hhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q psy195 100 --GGNVLLT-VTAIDPLNIPKRTFTLVGLLLIAVGTGGIK-PCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIST 175 (691)
Q Consensus 100 --ig~ill~-~s~~~~~~~~~~~~l~i~~~l~gig~G~~~-~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp 175 (691)
.+..... .... +. .-++++.++.++..+... +.++. .|.+- ..-.++.+.=+|-..+..++|.+++.
T Consensus 85 ~l~~pff~~v~~pl--l~----~n~~lg~iig~i~l~~~f~~~~~~--~Ea~~-er~sr~~~feYG~~R~wGSig~ai~s 155 (412)
T PF01306_consen 85 LLFGPFFIYVFGPL--LQ----SNFWLGAIIGGIYLGLVFNAGVPL--SEAYA-ERVSRRNGFEYGRARMWGSIGFAIAS 155 (412)
T ss_dssp HTCHHHHHHTHHHH--HH----TT-HHHHHHTTTTTTTTTTTHHHH--HHHHH-HHHHHHHSS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HH----HHHHHHHHHHHHHHHHHHcccchH--HHHHH-HHHHHHhcCCcchHHHHhhHHHHHHH
Confidence 2222221 1110 00 112333333333333322 22222 24332 22244455556777778899999999
Q ss_pred HHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 176 FITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 176 ~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
.++|.+.+ .+-+..|++..+..++..++.+..
T Consensus 156 ~~~G~L~~--------i~p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 156 LLAGILFN--------INPNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp HHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHhheeee--------eCccHHHHHHHHHHHHHHHHHHHc
Confidence 99998865 233566776554444333333333
No 111
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.27 E-value=4.4e-10 Score=119.45 Aligned_cols=173 Identities=21% Similarity=0.321 Sum_probs=145.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhH-HHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFL-TIVILSIVYL 99 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk-~i~ig~il~~ 99 (691)
|.++...+..++...++.....+++.++.+.+|.+..+.+.+.....++..++.++.|+++||+ |||+ .+.++.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 3445555556666667777778889998887899999999999999999999999999999998 9999 9999988888
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.+........ ....+..++.|++.+...+...++..|.+| +++|++.++......++|..+++.+.+
T Consensus 254 i~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~i~g 322 (352)
T cd06174 254 LGLLLLALAPSL-------ALLLVALLLLGFGLGFAFPALLTLASELAP----PEARGTASGLFNTFGSLGGALGPLLAG 322 (352)
T ss_pred HHHHHHHHhccH-------HHHHHHHHHHHHHHhccchhHHHHHHhhcC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777654321 667888999999999999999999999877 799999999999999999999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
.+.+ ..+|+..|.+.+++.+++.+..
T Consensus 323 ~l~~-------~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 323 LLLD-------TGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHhc-------ccCcchHHHHHHHHHHHHHHHh
Confidence 9876 4678888888777766665543
No 112
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.26 E-value=2.1e-10 Score=123.49 Aligned_cols=169 Identities=15% Similarity=0.108 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.++.+....++..........+++.|. +++|.+..+++.+.+.+.++..++.+++|+++||+ |||+.+.++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 344444444444444444445566665 56899999999999999999999999999999997 9999999888887777
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.+++........ ..+++..++.+++.|...+..+++.+|.+| +++|++..++.+...++|..++|.+.+.+
T Consensus 284 ~~~~~~~~~~~~-----~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 354 (377)
T TIGR00890 284 MAAMLFIPMLND-----VLFLATVALVFFTWGGTISLFPSLVSDIFG----PANSAANYGFLYTAKAVAGIFGGLIASHA 354 (377)
T ss_pred HHHHHHcccchh-----HHHHHHHHHHHHHhccchhccHHHHHHHhh----hhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 766554321100 334456677888888888888889999887 88999999999999999999999999988
Q ss_pred hccccccCCCCchhHHHHHHHHHHHHH
Q psy195 182 RHDMQCFGQEACFPLAFGVPALLMFLA 208 (691)
Q Consensus 182 ~~~~~~~g~~~~w~~~F~i~~~l~~l~ 208 (691)
.+ ..||+..|.+.+++.+++
T Consensus 355 ~~-------~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 355 LT-------EIGFEYTFIVTGAFALTS 374 (377)
T ss_pred Hh-------hhchhhHHHHHHHHHHHh
Confidence 76 467998888877655554
No 113
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.26 E-value=4e-10 Score=132.99 Aligned_cols=134 Identities=8% Similarity=0.006 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhh
Q psy195 60 TVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCV 139 (691)
Q Consensus 60 g~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~ 139 (691)
.....+..++..++.+++|+++||+ |||+++.++.++..++.+++++.... ..+++.+++.+++.++..+..
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~s~-------~~ll~~~~l~g~~~~~~~~~~ 669 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGNSE-------SAMIALLCLFGGLSIAAWNAL 669 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHccH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 3445566788899999999999997 99999999988888877776654221 456666777888888888889
Q ss_pred hhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 140 SSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 140 ~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
.++.+|++| .+.|++++++.+....+|+++||.+++.+.. .+...+|.+.++++++++++.+
T Consensus 670 ~a~~aEl~P----t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~--------~~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 670 DVLTVELYP----SDKRATAFGFLNALCKAAAVLGILIFGSFVG--------ITKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHHHHHHH
Confidence 999999998 8899999999999999999999999987765 1245667766666555544433
No 114
>KOG2615|consensus
Probab=99.26 E-value=5.4e-10 Score=118.56 Aligned_cols=119 Identities=13% Similarity=0.051 Sum_probs=103.8
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q psy195 52 LLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVG 131 (691)
Q Consensus 52 lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig 131 (691)
.+.+..-+|.+-+.|.++..+.++..|.++|++ |||.+++++++...+..++.+.+..- ..+.++|++.|+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~~F-------~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSRNF-------AAFVLARFLGGIF 134 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHhhhhc
Confidence 344567789999999999999999999999999 99999999998888888887776431 5677789999999
Q ss_pred hhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 132 TGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 132 ~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
-|.. ..+.++++|.++ +++|+.+++....+..+|.++||.+++++..
T Consensus 135 kgnl-~v~rAiisdV~s----ek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 135 KGNL-SVIRAIISDVVS----EKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred cCch-HHHHHHHHhhcC----hhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 9886 457899999887 7999999999999999999999999999865
No 115
>PRK03699 putative transporter; Provisional
Probab=99.24 E-value=5.1e-10 Score=123.32 Aligned_cols=170 Identities=12% Similarity=0.051 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+.++.+.+..++...+++++..++|.|+++.+|++..+++.+.+.+.++..++.+++|+++||+ |||+.+.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 4555555555666677778888999999999999999999999999999999999999999997 999988877666555
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
+..++..... . ....+..++.|++.+...+...++..+..| +.+++..++.....++|..++|.+.++
T Consensus 284 ~~~~~~~~~~--~-----~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~g~~i~p~~~G~ 351 (394)
T PRK03699 284 LMYLFVNTDD--P-----SHLLYAILGLGFFSSAIYTTIITLGSQQTK-----VASPKLVNFILTCGTIGTMLTFVVTSP 351 (394)
T ss_pred HHHHHHHcCC--c-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 5444433221 1 445556677888877777777777777654 234556777778889999999999999
Q ss_pred hhccccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 181 FRHDMQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 181 l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
+.+ ..|++..|++.+++.+++.+
T Consensus 352 l~~-------~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 352 IVA-------HFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHH-------HhCchhhhhhhHHHHHHHHH
Confidence 877 45688777766665555543
No 116
>KOG2504|consensus
Probab=99.24 E-value=1.2e-09 Score=124.23 Aligned_cols=174 Identities=10% Similarity=0.045 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 24 FFIVINEFCERFCYYGMRTV---LSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 24 ~~l~~~~~~~~~~~y~i~~~---l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.+++..++.....+++... +-..++++++-+..+++++.++......+..|+.+.+.||+ |.|.++++|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 34444454555555544432 45556788999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHH-HHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGL-LLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~-~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
|+++..++..- +.+++.. ++.|+|.|+...+....+..+| +++|+.+.++-..+..+|.++-|.+.-
T Consensus 124 g~~lssF~~~i-------~~l~lt~gvi~G~G~~~~~~paiviv~~YF-----~kkR~lA~Gia~~GsG~G~~~~~~l~~ 191 (509)
T KOG2504|consen 124 GLLLSSFATSL-------WQLYLTFGVIGGLGLGLIYLPAVVILGTYF-----EKKRALATGIAVSGTGVGTVVFPPLLK 191 (509)
T ss_pred HHHHHHHHhhH-------HHHHHHHHHHhhccchhhhcchhhhhhhHh-----HHHHHHHHhhhhccCCcceeeHHHHHH
Confidence 99998887421 4444444 5679999999988889999888 589999999988888888888788777
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKP 217 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~ 217 (691)
++.+ ..|||..+++.+.+.+-.+..-.+.+|
T Consensus 192 ~l~~-------~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 192 YLLS-------KYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHH-------HhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7777 578999888877776555555555555
No 117
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.23 E-value=8.1e-08 Score=112.25 Aligned_cols=590 Identities=11% Similarity=-0.039 Sum_probs=338.3
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHH-HHHHHHHH
Q psy195 52 LLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTL-VGLLLIAV 130 (691)
Q Consensus 52 lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~-i~~~l~gi 130 (691)
.+...........++.....+..+.....+|-..|+........+.++++.+.+.+.+.+........... ++.+.+.+
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaL 94 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLAL 94 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHH
Confidence 33344456677888999999999999999999966677777776666776776666554322110001111 35556788
Q ss_pred HhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccCCCCchhHHHHHHHHHHHHHH
Q psy195 131 GTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQ-CFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 131 g~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~-~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
+.++..++.+.+.+++.+ .-+++++.+..+++++..+.+.+ |.+++..+....+ +++...++...++..++.+++.+
T Consensus 95 ia~G~GgiKp~vsaf~gd-qf~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ 172 (654)
T TIGR00926 95 IALGTGGIKPCVSAFGGD-QFEERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI 172 (654)
T ss_pred HHhhccccccCchhhhHh-hcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence 889999999999999997 66666788899999999998877 5666666554221 11100011123334444455555
Q ss_pred HHHHhhcccccccCCCCCcchhHHHHHHHHHhhhcccccccccccch-hhhcccccCCccHHHHHHHHHHHHHHHHHHHH
Q psy195 210 IVFIIGKPMYKINKPKGNVALEVFQCTIRAIKNKFKTKKSERTKEHW-LDYANDKYDQGTIEDIKTLLRILLLFVPLPIF 288 (691)
Q Consensus 210 l~~~~~~~~~~~~~~~~~~~~~i~~vi~~~i~~~~~~~~~~~~~~~~-l~~~~~~~~~~~v~~~k~~l~~l~l~~~~~~~ 288 (691)
+.++.....++.-++.+.......++.......++. + ....+.++ .........+..+++++...+++.++.....+
T Consensus 173 ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~-~-~~~~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~ 250 (654)
T TIGR00926 173 LALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRK-R-FSTRSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPL 250 (654)
T ss_pred HHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHH-h-hccCCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence 666666655655566555444455655444333321 1 00000111 00000001122334577888889999999999
Q ss_pred HHHHhcccchHHHHHHHhcCcccCCceeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCchh-HHHHHHHHHHHH
Q psy195 289 WALFDQQGSRWTFQANRMDGRVFGTSLEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLNRPLR-KLTVGGLLAALS 367 (691)
Q Consensus 289 ~~~~~q~~s~~~~~~~~~~~~l~~G~~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~s~l~-~i~iG~ll~~~s 367 (691)
++.+.++......+..++++.. +.+...+.-...++.+-.++..++...+.+++..+.+.++... ++.-+.++++++
T Consensus 251 ~ifw~~~~Q~~s~~~~qa~~m~--~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~ls~l~k~~iG~~la 328 (654)
T TIGR00926 251 PMFWALFDQQGSRWTLQATRMD--GDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLA 328 (654)
T ss_pred HHHHHHHhcchhHHHHHHHHhc--CccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCCCChHHHHHHHHHHH
Confidence 9999999998888888888776 5544445567788998899989998866678888885423333 367788899999
Q ss_pred HHHHHHHHHhhhccccCCCCCCceeEEEEecCCCceeEecCCCccccccccccccccccccccccccccc-CCCCCC-Cc
Q psy195 368 FVVSALVEFNIRAHSQIAPQDRHFSLRIYNSMDCDFVFHSPLKNERVLRAMDMLALNNIPINGTQHFAAL-FEPSTS-CP 445 (691)
Q Consensus 368 ~li~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~ 445 (691)
.+..++++....+..+..|..+....+..+..+|....+. ..+..+.- .++. ..++.+.. +-.+.. ..
T Consensus 329 ~la~~va~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~ 398 (654)
T TIGR00926 329 ALSFFVAALVQLKVNPTLPEEPSANEIFLQVLNTDCTICD---FSVLSKRV---LPHD----VYLHLDKKNTSGDQGLFT 398 (654)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCcceEEEEecCCCCcce---EEEEecCC---cccc----cccccCcccccccccccc
Confidence 9888889988888888889999999999999999965431 01111100 0000 00000000 000000 00
Q ss_pred cccccc-ceeeee-cc---CCcceeeeeecchhhhhhcccCcceeeeeccCchhhhhhhhccccccccceeeecCCcccc
Q psy195 446 YVLNKT-FQSSVL-GA---DGKITEYYLIRDEKQQAHLKRLGEFHDLRNINSSLKMQILYGSELQGKRITLESDDGFYQD 520 (691)
Q Consensus 446 ~~~~~~-~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (691)
..-..+ ....+- +. .+.+.+.....+ ...+++ ++.+.-++. ++++++....+.+...
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 460 (654)
T TIGR00926 399 TKSSAKGWTLTYDLSYDGACGLTGNCPKTTD-AHELEP-KISYVLLLS----------------QGGYQLTANTDKPTDA 460 (654)
T ss_pred ccccccccceEEEEeccccccccCCCCcccc-ceeecC-CceEEEEEe----------------cCCcceeeeeecCccC
Confidence 000000 000010 00 000000000000 011110 111111110 0000011110111100
Q ss_pred CCCCCCc-------ccce-----eecCcccceeeecccchhhhccccccCCc-eeEEeeccCC-------------C-Cc
Q psy195 521 IDLPTGA-------CYTE-----YIEGIPAGVYEVRSENKVLKSNMELQDDN-VYVLNLNTEA-------------S-PE 573 (691)
Q Consensus 521 ~~~~~~~-------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------------~-~~ 573 (691)
.+..+.. ...+ ..+..++. .+++. . ..+......| .|+.....+. + .+
T Consensus 461 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 535 (654)
T TIGR00926 461 KTEKGMGSVRLVNTLNGEFGMISLCTSDSDS--VTPCN--P-RDPYDFYFRGTKYPANTCDRIDNAKSSTFLSNQLDMGI 535 (654)
T ss_pred CCCCCCceEEEEecCCCcceeeEEecccCcc--cccCC--c-ccccccccccceeeeeecccccccccccccccccccce
Confidence 0000000 0000 00011100 00000 0 0000111111 3332221110 0 00
Q ss_pred ccc--------ccc--cccCCCCceeeehhhHHHHHHHHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHH
Q psy195 574 HRT--------ARL--LKDDSSNKVSMLWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVA 643 (691)
Q Consensus 574 ~~~--------~~~--~~~~~~~~~s~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~ 643 (691)
.+. .+. ++..++++.+..|+++|+-.+.+.++....++.++..-+.++++++.-+.+|.+..+.+++...
T Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~ 615 (654)
T TIGR00926 536 YYLIVITENSKIDELQAQIVELVSVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNL 615 (654)
T ss_pred EEEEEEcCCCCCCcceeEEEEecCCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 111 122 2245577788899999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCchHHHHHHHHHHHHHHHHHHHhhhccce
Q psy195 644 IVAEAKIFENQAYEFLLFASLMVVDMGVFALLAMRYK 680 (691)
Q Consensus 644 ~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 680 (691)
++..+..++....+++.|+.++.+.++++.+++.-++
T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~ 652 (654)
T TIGR00926 616 IVVVIAEFENFSVQAAEFFLFASLMLVVMAIFSILAY 652 (654)
T ss_pred HHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999887653
No 118
>PRK09952 shikimate transporter; Provisional
Probab=99.23 E-value=6.2e-10 Score=124.65 Aligned_cols=182 Identities=10% Similarity=0.045 Sum_probs=126.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 18 KYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 18 ~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
++++.+.......++..+++|....+++.|+++.+|++......+.....+...++.+++|+++||+ ||||++.++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~ 325 (438)
T PRK09952 247 RHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALI 325 (438)
T ss_pred HchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHH
Confidence 3444444444455666778888888999999989999988766666667777788899999999997 999999888766
Q ss_pred HHHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHH-HHHHHHHHH
Q psy195 98 YLGGNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFS-INAGSLIST 175 (691)
Q Consensus 98 ~~ig~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~-~nlG~~igp 175 (691)
..++.+.+.... ..+. ...+.+..++.+++.+...+..+++.+|.+| .+.|+.+.++.+.. ..+|+.++|
T Consensus 326 ~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p----~~~r~tg~g~~~~~~~~lgg~~~p 397 (438)
T PRK09952 326 GTLSAFPFFMALEAQSI----FWIVFFSIMLANIAHDMVVCVQQPMFTEMFG----ASYRYSGAGVGYQVASVVGGGFTP 397 (438)
T ss_pred HHHHHHHHHHHHHcCCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----cchhHHHHhHHHHHHHHHHHHHHH
Confidence 554443332211 1000 0333445566678888888888999999998 67888888875544 458889999
Q ss_pred HHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 176 FITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 176 ~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
.+.+++.+.. ..+|...+....+..+++++..+
T Consensus 398 ~i~g~l~~~~-----~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 398 FIAAALVTYF-----GGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHhc-----CCCchHHHHHHHHHHHHHHHHHH
Confidence 9999886620 13477777666655555554443
No 119
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.23 E-value=2.7e-08 Score=113.97 Aligned_cols=147 Identities=14% Similarity=0.171 Sum_probs=109.8
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q psy195 44 LSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLV 123 (691)
Q Consensus 44 l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i 123 (691)
...++.+++|-++ ...++.....++..+..++.|.|+|.| |||..++.+.++.++|.++.+.+.. . ..++.
T Consensus 66 ~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~~--~-----~~~ia 136 (599)
T PF06609_consen 66 ILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQN--M-----NTFIA 136 (599)
T ss_pred HHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCCc--H-----HHHHH
Confidence 4467778888864 456778889999999999999999998 9999999999999999999887632 1 77889
Q ss_pred HHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHH
Q psy195 124 GLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPAL 203 (691)
Q Consensus 124 ~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~ 203 (691)
+-.+.|+|.|... .....++|..| .+.|.....+..........+++.++..+.. +.+||+.|++..+
T Consensus 137 g~~l~GvgaG~~~-~~~~~isEl~p----~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-------~~~WRw~~~~~~i 204 (599)
T PF06609_consen 137 GMVLYGVGAGVQE-LAALAISELVP----NKWRGLGLAIASIPFIITTWISPLIAQLFAA-------HSGWRWIFYIFII 204 (599)
T ss_pred HHHHHHHhhHHHH-HHHHHHHHhcc----cchhhhHhHHHHHHHHhhhcccHHHHHHhcc-------CCCcchHHHHHHH
Confidence 9999999987765 45666899776 6777766655544433333344554444332 4689999998887
Q ss_pred HHHHHHHH
Q psy195 204 LMFLAIIV 211 (691)
Q Consensus 204 l~~l~~l~ 211 (691)
...++++.
T Consensus 205 ~~~i~~vl 212 (599)
T PF06609_consen 205 WSGIALVL 212 (599)
T ss_pred HHHHHHHH
Confidence 66655543
No 120
>PTZ00207 hypothetical protein; Provisional
Probab=99.22 E-value=1.9e-09 Score=123.98 Aligned_cols=152 Identities=14% Similarity=0.046 Sum_probs=114.3
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q psy195 42 TVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFT 121 (691)
Q Consensus 42 ~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l 121 (691)
......+++++|++..+.+++.++.. ...++.+++|+++||+ |||+++.++.+++.+|.++.+++..... ....+.+
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~~~i-~~s~~~l 123 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQEVI-EGSVVRL 123 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhcccc-cCcHHHH
Confidence 34555678899999999998887643 3345677889999998 9999999999999999998887521100 0111788
Q ss_pred HHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHH-HHHHHHHhhccccccCCCCchhHHHHH
Q psy195 122 LVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLI-STFITPIFRHDMQCFGQEACFPLAFGV 200 (691)
Q Consensus 122 ~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~i-gp~i~~~l~~~~~~~g~~~~w~~~F~i 200 (691)
++.|++.|+|.+...+.....+.++|| ++||.+.++...+.++|+++ ++...+++.. +|+..|++
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~~~Fp-----~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~---------~~~~~fl~ 189 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVLSVFP-----SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD---------NTSAYFFF 189 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hHHHHHHH
Confidence 999999999999988888888999995 67899999999999999975 4544444432 36666666
Q ss_pred HHHHHHHHHH
Q psy195 201 PALLMFLAII 210 (691)
Q Consensus 201 ~~~l~~l~~l 210 (691)
.+++.++..+
T Consensus 190 l~vl~~vv~l 199 (591)
T PTZ00207 190 LMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHH
Confidence 5554444333
No 121
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.22 E-value=8.8e-10 Score=119.45 Aligned_cols=170 Identities=15% Similarity=0.100 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
++.+....++...........++.|+.+++|.++.+++.+.....+...++.+++|+++||+ |||+++.++.++..+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHH
Confidence 33333333333333444556788899888999999999988887777888899999999997 99999888766555544
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
++....... +.+++.+++.|++.|...+....+..|..| + +++++.++++...++|..++|.+.+.+.
T Consensus 280 ~~~~~~~~~-------~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 280 TGLAADNSL-------WALLMLQLLNAIFIGILAGIGMLYFQDLMP----G-RAGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred HHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCc----c-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433332111 555667778888888888888888888765 3 4678999999999999999999999887
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 183 HDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 183 ~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
+ ..+|+..|.+.++..+++.++.
T Consensus 348 ~-------~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 348 E-------RWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred H-------hccchhHHHHHHHHHHHHHHHH
Confidence 7 4578888888777666665544
No 122
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.20 E-value=1.4e-09 Score=119.90 Aligned_cols=163 Identities=10% Similarity=-0.016 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHH
Q psy195 28 INEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTV 107 (691)
Q Consensus 28 ~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~ 107 (691)
...++....++....++|.|+.+ .|++..+++.+.+.+.++..++.++.|+++||+ |||+.+.++.+...++.+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHh
Confidence 33344445566667778888865 799999999999999999999999999999997 9999988766555555444433
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy195 108 TAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQC 187 (691)
Q Consensus 108 s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~ 187 (691)
... . ..+.+..++.|++.++..+...++..|.+| +++|++..++.+....+|..+||.+.+.+.+.
T Consensus 305 ~~~--~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p----~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~--- 370 (406)
T PRK11551 305 APS--F-----AGMLLAGFAAGLFVVGGQSVLYALAPLFYP----TQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL--- 370 (406)
T ss_pred cCc--H-----HHHHHHHHHHHHHHHhHHHHHHHHHHHHcc----hhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc---
Confidence 211 1 445566677788877778888899999887 88999999999999999999999999988762
Q ss_pred cCCCCchhHHHHHHHHHHHHHH
Q psy195 188 FGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 188 ~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
..+|...+.+.....++++
T Consensus 371 ---~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 371 ---GRSTVGVIGASIPVILVAA 389 (406)
T ss_pred ---CCchHHHHHHHHHHHHHHH
Confidence 2345556655544444433
No 123
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.19 E-value=3.2e-10 Score=122.81 Aligned_cols=166 Identities=15% Similarity=0.078 Sum_probs=123.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
++.++......++....++....+++.|+++++|.+..+++.+.....++..++.+++|+++||+ |||+.+.++..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~ 296 (394)
T TIGR00883 218 RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAA 296 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 34466666666666777777888899999888999999999999999999999999999999997 99998876554443
Q ss_pred HHH-HHHH-HhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHH-HHHHHHHHHHHHH
Q psy195 100 GGN-VLLT-VTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLF-YFSINAGSLISTF 176 (691)
Q Consensus 100 ig~-ill~-~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~-~~~~nlG~~igp~ 176 (691)
+.. .+.. ....++. ..+.++.++.+++.+...+...+++.|.+| +++|+++.+.. .++..+|..++|.
T Consensus 297 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~~~~~g~~~~p~ 367 (394)
T TIGR00883 297 LLAVPLLMALLDSGSF-----TLFFFLVLGLALIGGMYTGPMGSFLPELFP----TEVRYTGASLAYNLAGAIFGGFAPY 367 (394)
T ss_pred HHHHHHHHHHhcCCch-----HHHHHHHHHHHHHHHHHhhhHHHHHHHhCC----ccceeeEeeehhHhHHHHHhhHHHH
Confidence 322 2221 1111111 556667788888888888999999999887 77888888874 4555678889999
Q ss_pred HHHHhhccccccCCCCc-hhHHHHHHH
Q psy195 177 ITPIFRHDMQCFGQEAC-FPLAFGVPA 202 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~-w~~~F~i~~ 202 (691)
+++++.+ ..+ |+..+....
T Consensus 368 ~~g~l~~-------~~g~~~~~~~~~~ 387 (394)
T TIGR00883 368 IAAALVA-------MTGDWYAIGYYLA 387 (394)
T ss_pred HHHHHHH-------HcCcchhHHHHHH
Confidence 9999877 234 665554433
No 124
>KOG0253|consensus
Probab=99.18 E-value=1.2e-08 Score=107.85 Aligned_cols=167 Identities=14% Similarity=0.047 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy195 36 CYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNI 115 (691)
Q Consensus 36 ~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~ 115 (691)
........+..-+....|.+..++.++......+..+++...|.++|++ ||||...+..+...+...+-.. .|++
T Consensus 92 m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~--spnf-- 166 (528)
T KOG0253|consen 92 MEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGA--SPNF-- 166 (528)
T ss_pred HHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcC--CCCe--
Confidence 3334445555566677899999999999999999999999999999997 9999887775544443333222 3444
Q ss_pred chhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchh
Q psy195 116 PKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFP 195 (691)
Q Consensus 116 ~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~ 195 (691)
..+.+.|.+.|+|.|+ .|...++-.|..| ...|....-.. ....+|.++...+.-.... +.|||
T Consensus 167 ---~~L~~f~~l~~~g~gg-~pv~~~~yle~lp----~~~r~~~~V~~-~~waig~v~ea~law~vm~-------~~gwr 230 (528)
T KOG0253|consen 167 ---ASLCVFRALWGFGVGG-LPVDSAIYLEFLP----SSHRWLLTVMS-FFWAIGQVFEALLAWGVMS-------NFGWR 230 (528)
T ss_pred ---ehhhHHHHHHhccCCC-ccHhHHHHHHhcc----CcCCCcchhHH-HHHHHHHHHHHHHHHHHHH-------hhhHH
Confidence 7789999999999999 7888888888776 44455444444 4556777777777766655 46798
Q ss_pred HHHHHHHHHHHHH--HHHHHhhcccccccC
Q psy195 196 LAFGVPALLMFLA--IIVFIIGKPMYKINK 223 (691)
Q Consensus 196 ~~F~i~~~l~~l~--~l~~~~~~~~~~~~~ 223 (691)
+..........+. ...+..+++++.-.+
T Consensus 231 ~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~ 260 (528)
T KOG0253|consen 231 YLLFTSSTPLMFAARFLVWVYESPRFYLAK 260 (528)
T ss_pred HHHHHHHhHHHHHHHHHhhcccCcchhhhc
Confidence 6655555433332 233445556654433
No 125
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.18 E-value=1.4e-09 Score=121.15 Aligned_cols=183 Identities=10% Similarity=0.049 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------HHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHH
Q psy195 24 FFIVINEFCERFCYYGMRTVLSLYMHLVLLYD--------EKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILS 95 (691)
Q Consensus 24 ~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s--------~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~ 95 (691)
+.+++..++..........+++.|+.+ .|.+ ....+.+.++..++..++.++.|+++||+ |||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 334444444444444455667778754 4544 36678899999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHH-HHHHHHHHHH
Q psy195 96 IVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFY-FSINAGSLIS 174 (691)
Q Consensus 96 il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~-~~~nlG~~ig 174 (691)
++..++..++........ ....+++..++.|++.+...+....+++|.+| +++|++.+++.+ ...++|.++|
T Consensus 289 ~~~~v~~~l~~~~~~~~~---~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p----~~~~g~~~g~~~~~~~~lg~~iG 361 (418)
T TIGR00889 289 VAWALRFGFFAYGDPEYF---GYALLFLSMIVYGCAFDFFNISGSVFVEKEVP----VHIRASAQGLFTLMCNGFGSLLG 361 (418)
T ss_pred HHHHHHHHHHHHcCcchh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHhhHHHHH
Confidence 888777666655311000 00456678889999999988999999999887 899999999997 5678999999
Q ss_pred HHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhc
Q psy195 175 TFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGK 216 (691)
Q Consensus 175 p~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~ 216 (691)
|.+++++.+..+..+ ..||+.+|.+.+++.+++.++++...
T Consensus 362 p~l~G~l~~~~g~~~-~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 362 YILSGVMVEKMFAYG-TFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHhcccc-CCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999876311100 14699999887776665555444433
No 126
>PRK12382 putative transporter; Provisional
Probab=99.17 E-value=1.5e-09 Score=119.05 Aligned_cols=160 Identities=18% Similarity=0.170 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcC
Q psy195 32 CERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAID 111 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~ 111 (691)
+...++..+..+.+.|+.+ .|++. .+.....+.++..++.++.|++.||+ ||||.+.++..+..++.+++.....
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~~- 301 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAPT- 301 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHccc-
Confidence 3345555666777888764 56654 45666777888889999999999997 9999999888877777766554321
Q ss_pred CCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q psy195 112 PLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQE 191 (691)
Q Consensus 112 ~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~ 191 (691)
. ...+++.++.|++.+...+...+...+.+| +++|++..++++...++|..++|.+.+++.+ .
T Consensus 302 -~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-------~ 364 (392)
T PRK12382 302 -A-----WVALAGAALTGAGCSLIFPALGVEVVKRVP----SQVRGTALGGYAAFQDIAYGVSGPLAGMLAT-------S 364 (392)
T ss_pred -H-----HHHHHHHHHHHHHHHhHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H
Confidence 1 556678888899998888888888888776 8999999999999999999999999999887 4
Q ss_pred CchhHHHHHHHHHHHHHHHHHH
Q psy195 192 ACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 192 ~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
.||+..|.+.+++.++++++.+
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 365 FGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred hCchHHHHHHHHHHHHHHHHHH
Confidence 6799999888877666665544
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.17 E-value=1.3e-09 Score=119.90 Aligned_cols=164 Identities=11% Similarity=0.048 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHH---HHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHh
Q psy195 32 CERFCYYGMRTVLSLYMHLVLLYDEK---TATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVT 108 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~~lg~s~~---~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s 108 (691)
+.........++++.|+.+..+.... ..+.+..+..++..++.++.|+++||+ |||+.+.++.++..++.+++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
T PRK09874 230 IIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHh
Confidence 33344445566778887764433221 345566667788889999999999997 99999998887776666655443
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy195 109 AIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCF 188 (691)
Q Consensus 109 ~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~ 188 (691)
..+ +.+++.+++.|++.|...+...++..+..| ++++++.+++++...++|..+||.+++.+.+
T Consensus 309 ~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~----- 372 (408)
T PRK09874 309 QTP-------LQLGILRFLLGAADGALLPAVQTLLVYNSS----NQIAGRIFSYNQSFRDIGNVTGPLMGAAISA----- 372 (408)
T ss_pred ccH-------HHHHHHHHHHHhhhHhhHHHHHHHHHHhCC----cccceeeehHHHHHHHHHHHhhHHHHHHHHh-----
Confidence 221 567778889999999999988888888555 7889999999999999999999999998877
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 189 GQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 189 g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
..+|+..|.+.+++.+++.+..+.
T Consensus 373 --~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 373 --NYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred --hcchhHHHHHHHHHHHHHHHHHHH
Confidence 467999999888777766655443
No 128
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.17 E-value=3.1e-09 Score=116.47 Aligned_cols=155 Identities=14% Similarity=0.212 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy195 34 RFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPL 113 (691)
Q Consensus 34 ~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~ 113 (691)
...+.....++|.|+++ .|.+..+++.+.+...++..++.++.|+++||+ |||+.+..+.++..++.++.. . .
T Consensus 213 ~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~-~--- 285 (381)
T PRK03633 213 GIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S-Q--- 285 (381)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h-h---
Confidence 33444555678888865 699999999999999999999999999999998 999999888777777655443 1 1
Q ss_pred CCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCc
Q psy195 114 NIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEAC 193 (691)
Q Consensus 114 ~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~ 193 (691)
......+++.|++.+...|...+...|..| +++++...+.+....++|.++||.+++++.+ ..+
T Consensus 286 -----~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~-------~~g 349 (381)
T PRK03633 286 -----AAMAPALFILGAAGFTLYPVAMAWACEKVE----HHELVAMNQALLLSYTVGSLLGPSFTAMLMQ-------NYS 349 (381)
T ss_pred -----HHHHHHHHHHHHHHHhHHHHHHHHHHccCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhC
Confidence 233456677777777778888888888776 6677777888788889999999999999987 466
Q ss_pred hhHHHHHHHHHHHHHHHH
Q psy195 194 FPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 194 w~~~F~i~~~l~~l~~l~ 211 (691)
|+..|.+.+++.+++...
T Consensus 350 ~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 350 DNLLFIMIASVSFIYLLM 367 (381)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 888888766665554433
No 129
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.15 E-value=2.5e-09 Score=118.58 Aligned_cols=159 Identities=9% Similarity=0.013 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q psy195 37 YYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIP 116 (691)
Q Consensus 37 ~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~ 116 (691)
..+...++|.|+++.+|++..+.|++.+...++..++.++.|+++||. ++++.+..+.++..++.+++..... .
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~--~--- 312 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMPM--W--- 312 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccch--H---
Confidence 345666788999887999999999999999999999999999999996 8888888887777777665544321 1
Q ss_pred hhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhH
Q psy195 117 KRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPL 196 (691)
Q Consensus 117 ~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~ 196 (691)
....++.++.|++.+...+...+++.+.+| ++.|++.+++++...++|..+||.+.+++.+ ..|++.
T Consensus 313 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p----~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~-------~~g~~~ 379 (417)
T PRK10489 313 --ILAVLCLALFGYLSAISSLLQYTLLQTQTP----DEMLGRINGLWTAQNVTGDAIGAALLGGLGA-------MMTPVA 379 (417)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----HHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH-------Hhchhh
Confidence 455677778888888877777888889776 8899999999999999999999999999887 356666
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy195 197 AFGVPALLMFLAIIVFII 214 (691)
Q Consensus 197 ~F~i~~~l~~l~~l~~~~ 214 (691)
.+.+.++..++..++...
T Consensus 380 ~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 380 SASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 676655554444444333
No 130
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.14 E-value=2.7e-09 Score=115.05 Aligned_cols=178 Identities=12% Similarity=0.047 Sum_probs=122.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHH-HHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTI-VILSIVYL 99 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i-~ig~il~~ 99 (691)
+.++..++..++....+.....+++.|+.+.+|.+..+++.+.+...++..++.+++|+++||+ |||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4456666666677777778888899999999999999999999999999999999999999997 998611 11111111
Q ss_pred HHHHHHHHh-hcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVT-AIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 100 ig~ill~~s-~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
++.++.... ...... ......+...+.+.+..+..+...++.+|.+| +++|++..++.+...++|..++|.+.
T Consensus 294 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 294 IAGLVLSLLMFATNYV--NIPYAALALVALGFFGLGAGAIGWALISDNAP----GNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHhccc--hhHHHHHHHHHHHHhchhhhhHHHHHHHhhcC----hhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 111111110 000000 00222233333333333367889999999887 88999999999999999999999999
Q ss_pred HHhhccccccCCCCc-hhHHHHHHHHHHHHHHHHH
Q psy195 179 PIFRHDMQCFGQEAC-FPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~-w~~~F~i~~~l~~l~~l~~ 212 (691)
+++.+ ..+ |+..|.+.++..+++.+..
T Consensus 368 g~l~~-------~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 368 GAIAA-------TTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hhhcc-------CCCchhHHHHHHHHHHHHHHHHH
Confidence 99877 345 8888887776665555443
No 131
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.14 E-value=4.2e-10 Score=103.10 Aligned_cols=131 Identities=12% Similarity=0.213 Sum_probs=107.1
Q ss_pred HHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhh
Q psy195 64 HIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFG 143 (691)
Q Consensus 64 ~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ 143 (691)
+.+.++..++.++.|+++||+ |||+.+..+..+..++.++...... . +.+.+.+++.|++.+...+...++.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSSN--I-----TVLIIARFLQGFGAAFALVAGAALI 76 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhcc--H-----HHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 445678889999999999997 9999999998888877776655321 1 6677889999999999999999999
Q ss_pred hccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 144 GDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 144 ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
.|.+| +++|++..++.+...++|..+++.+.+.+.+ ..+|+..|.+..+..+++.+...
T Consensus 77 ~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 77 ADIYP----PEERGVALGLMSAGIALGPLLGPPLGGVLAQ-------FLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred HHHCC----hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc-------ccchHHHHHHHHHHHHHHHHHHh
Confidence 99887 7889999999999999999999999998876 46788888877665555544433
No 132
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.14 E-value=2.1e-09 Score=120.85 Aligned_cols=176 Identities=13% Similarity=0.056 Sum_probs=118.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCch--hHHH-HHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGK--FLTI-VILSIV 97 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGR--kk~i-~ig~il 97 (691)
+.+|...+..++....+++...++|.|+++..|++..+++.+...+.++..++.+++|+++||+ ++ |+.. .+...+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 3455555666666667778888999999988999999999999999999999999999999996 53 4322 222223
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHH-HHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLI-STF 176 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~i-gp~ 176 (691)
..++.+++......+. ....++.++.|.+..........+..|.+| ++.|+++.++.+...++|+.+ +|.
T Consensus 332 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p----~~~~g~~~g~~~~~~~~g~~~~g~~ 402 (452)
T PRK11273 332 VTIATIVYWLNPAGNP-----TVDMACMIVIGFLIYGPVMLIGLHALELAP----KKAAGTAAGFTGLFGYLGGSVAASA 402 (452)
T ss_pred HHHHHHHHHHhcccCh-----HHHHHHHHHHHHHHHhHHHHHHHHHHHHcC----hhhhhhHHHHHHHHHHHHHHHhhhh
Confidence 3333333222111000 333344444444433322333456678776 889999999999888888654 799
Q ss_pred HHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 177 ITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
+.+++.+ ..||+..|.+.++..+++++...
T Consensus 403 v~g~l~~-------~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 403 IVGYTVD-------FFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred hHHHHHH-------HhcchHHHHHHHHHHHHHHHHHH
Confidence 9998877 46799899887776666654433
No 133
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.14 E-value=3.4e-09 Score=118.50 Aligned_cols=177 Identities=11% Similarity=-0.006 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCch--hHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGK--FLTIVILSIVYL 99 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGR--kk~i~ig~il~~ 99 (691)
.++.+.+..++....++++..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.+| ++......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 355555555555556667778899999888999999999999999999999999999999996222 222222111111
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.+.+....... .....+..+..|++............+|.+| +++|++..++.+...++|.+++|.+.+
T Consensus 324 ~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~g~~~~p~~~g 394 (434)
T PRK11663 324 LSVGSLWLMPFAS-----YVMQAACFFTIGFFVFGPQMLIGMAAAECSH----KEAAGAATGFVGLFAYLGAALSGYPLA 394 (434)
T ss_pred HHHHHHHHccccc-----HHHHHHHHHHHHHHHhhHHHHHHHHHHhccc----HhhHHhHHHHHHHHHHHHHHHhcccHH
Confidence 1211111111110 0222233333343322222233456678776 889999999999999999999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
++.+ ..||+..|.+.+++.+++.+..+.
T Consensus 395 ~l~~-------~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 395 KVLE-------IWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHH-------hcccHHHHHHHHHHHHHHHHHHHH
Confidence 9887 467998888877776666554443
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=99.13 E-value=5.5e-09 Score=114.78 Aligned_cols=173 Identities=12% Similarity=0.002 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
++...+..++....+++...+++.|+.+..|++..+++.+.+.+.++..++.++.|+++||+ |||+. .++..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHHH
Confidence 33334444444555566667788888888999999999999999999999999999999997 98765 44444444443
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
.++.... ++. ..+++..++.|++.+...+...+.+.+..| +.|+++.+++....++|..+||.+++.+.
T Consensus 285 ~~l~~~~-~~~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~g~~~G~~~~G~~~ 353 (390)
T PRK03545 285 LLLLPAA-NSE-----WHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-----DATDVAMALFSGIFNIGIGAGALLGNQVS 353 (390)
T ss_pred HHHHHHh-chH-----HHHHHHHHHHHHHHhcchHHHHHHHHHhCC-----CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322211 111 556667778888887777777777777543 47789999998889999999999999998
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 183 HDMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 183 ~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
+ ..+++..|.+.+++.++++++....
T Consensus 354 ~-------~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 354 L-------HLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred h-------ccChhHHHHHHHHHHHHHHHHHHHH
Confidence 7 5789989988887777776665444
No 135
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.12 E-value=1.1e-09 Score=123.28 Aligned_cols=175 Identities=11% Similarity=0.069 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhc-CchhHHHHHHHHHHH-
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTY-LGKFLTIVILSIVYL- 99 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~-lGRkk~i~ig~il~~- 99 (691)
.++..++..++..+++++...+++.|+++ +|++..+++.+.++..++..++.+++|+++||. .++++...++..+..
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 45555555666667777777888999864 799999999999999999999999999999983 144544444333222
Q ss_pred -HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 -GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 100 -ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
++.++...... . +.+++.+++.|++.+...++..+++.|.+| ++++++.+++++...++|.++||.++
T Consensus 321 ~l~~ll~~~~~~--~-----~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~lg~~igp~i~ 389 (455)
T TIGR00892 321 GLTHLLCALAGD--Y-----TGLVIYCIFFGLSFGSVGALLFEVLMDLVG----AQRFSSAVGLVTIVECCAVLIGPPLA 389 (455)
T ss_pred HHHHHHHHHhch--H-----HHHHHHHHHHHHHhchHHHHHHHHHHHHhh----HHHHhhHHhHHHHHHHHHHHccccce
Confidence 22233222211 1 566778889999999999999999999776 88899999999999999999999999
Q ss_pred HHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
+.+.+. ..+|+..|++.+++.+++.+...+
T Consensus 390 G~l~~~------~g~~~~~f~~~~~~~li~~~~~~~ 419 (455)
T TIGR00892 390 GRLVDA------TKNYKYIFYASGSIVVSAGLFLAI 419 (455)
T ss_pred eeeehh------cCCcchHHHHhhHHHHHHHHHHHH
Confidence 988762 235888888888776666554433
No 136
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.12 E-value=7.6e-09 Score=113.57 Aligned_cols=168 Identities=9% Similarity=0.001 Sum_probs=136.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++...+..++...+.....++.+.|+++ +|.+..+.|.+.+...++..++.++.|++.||+ |+|+.+.++.++..+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 445666666666677777778889999965 899999999999999999999999999999998 999999999999888
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHH-HHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFY-FSINAGSLISTFITP 179 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~-~~~nlG~~igp~i~~ 179 (691)
..++++.+..+ +.+++..++.|+..|...+....++.+. | +++++++.+.+. ....+|..+++.++|
T Consensus 283 ~~~~~~~~~~~-------~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~----~~~~~~~q~~~~~~~~g~g~~~g~~~~G 350 (382)
T TIGR00902 283 RWAIIGAIEAF-------PLIFLLQILHCGTFAVCHLAAMRYIAAQ-P----GSEIAKLQALYNALAMGGLIAIFTAFAG 350 (382)
T ss_pred HHHHHHhHhhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhC-C----HhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777654332 6678889999999999999999999985 6 777888888876 466899999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
++.+ ..++ ..|.+.+++.+++++
T Consensus 351 ~l~~-------~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 351 FIYP-------TLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHH-------hccH-HHHHHHHHHHHHHHH
Confidence 9987 3455 456665655555443
No 137
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.12 E-value=1.6e-09 Score=116.78 Aligned_cols=179 Identities=12% Similarity=0.113 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcC-chhHHHHHHHH-HH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYL-GKFLTIVILSI-VY 98 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~l-GRkk~i~ig~i-l~ 98 (691)
|.+|++.+..++..+.-|++..+.|+|+.+..|+|...+++..+.|-+++..+++++||+|||+. |||..+-+.+. ..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 56888889898888888999999999999999999999999999999999999999999999987 77765543332 22
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHH-HHHHHHHH
Q psy195 99 LGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINA-GSLISTFI 177 (691)
Q Consensus 99 ~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nl-G~~igp~i 177 (691)
.++.+++..+.. . +..+..+..+++|+-.-+-.-.+.....|..| ++.-|++.|...++..+ |.+.+.+.
T Consensus 332 ~~~~~~~w~~~~--~---~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~p----K~AaGtA~Gf~Glf~Yl~Ga~~a~~~ 402 (448)
T COG2271 332 TASLVLYWLAPN--G---SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVP----KKAAGTATGFVGLFAYLIGAALAGLP 402 (448)
T ss_pred HHHHHHHHcCCC--c---cHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc----HhhccchhchhhhHHHHhhHHhcCCc
Confidence 333333333211 1 11556666777777666655666666778665 88899999999888888 88888888
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
.+++.+ ..||...|.+..+..+++.+++.+.
T Consensus 403 ~g~i~d-------~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 403 LGYIAD-------TWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred ceeeEe-------cCCCcchHHHHHHHHHHHHHHHHHH
Confidence 888776 4678888887766666666555544
No 138
>PRK11462 putative transporter; Provisional
Probab=99.10 E-value=5.8e-08 Score=109.59 Aligned_cols=147 Identities=16% Similarity=0.156 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHh----cCchhHHHH-HHHHHHHHHHH
Q psy195 29 NEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADT----YLGKFLTIV-ILSIVYLGGNV 103 (691)
Q Consensus 29 ~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr----~lGRkk~i~-ig~il~~ig~i 103 (691)
..+...+.+..+..++..|+++.+|+++..+|.+..+.-+.-.+.-|+.|+++|| + ||||..+ +|.+...++.+
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~-Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRW-GKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCC-CCcchhHhHHHHHHHHHHH
Confidence 3444455556666789999999999999999999999999999999999999996 5 9876554 56667677666
Q ss_pred HHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 104 LLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 104 ll~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
++... |....... ..+++..++..++..+...+..++.+|.-+ ++++|++..++...+.++|.++++.+...+
T Consensus 96 llf~~--p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~---d~~eRt~l~s~r~~~~~iG~~~~~~~~~pl 169 (460)
T PRK11462 96 LAYST--PDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITN---DPTQRISLQSWRFVLATAGGMLSTVLMMPL 169 (460)
T ss_pred HHHhC--CCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65432 32222222 445556666788888888888899998765 689999999999999999988887765543
No 139
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.09 E-value=3.3e-09 Score=120.15 Aligned_cols=148 Identities=14% Similarity=0.072 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q psy195 39 GMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKR 118 (691)
Q Consensus 39 ~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~ 118 (691)
+...++|.|+++++|++..+++.+.+...++..++.+++|+++||+ |||+++.++.++..++.++.........
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 366 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGGANV----- 366 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccccHH-----
Confidence 3557799999888999999999999999999999999999999997 9999988876655554443322211100
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHH
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAF 198 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F 198 (691)
+...+..++.+....+..+..+++..|.+| +++|++.+++++...++|+.+||.+.+.+.+ ..+|+..+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~-------~~g~~~~~ 435 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFD----TEQRAAGLGFTYNVGALGGALAPILGALIAQ-------RLDLGTAL 435 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCC----HHHhhcccchhhhhhhHHHHHHHHHHHHHhc-------cCChHHHH
Confidence 223333343333333345677888889777 8899999999999999999999999999877 45677666
Q ss_pred HHHHH
Q psy195 199 GVPAL 203 (691)
Q Consensus 199 ~i~~~ 203 (691)
.+.++
T Consensus 436 ~~~~~ 440 (496)
T PRK03893 436 ASLSF 440 (496)
T ss_pred HHHHH
Confidence 54443
No 140
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.09 E-value=2.7e-09 Score=116.55 Aligned_cols=139 Identities=14% Similarity=0.060 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy195 34 RFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPL 113 (691)
Q Consensus 34 ~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~ 113 (691)
.....+...+++.|+.+++|++..+++.+.+...++..++.++.|+++||+ |||+.+.++.++..+........ .++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~ 328 (405)
T TIGR00891 251 NLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFAI-GANV 328 (405)
T ss_pred HHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHHh-CCch
Confidence 334445566789999989999999999999999999999999999999997 99999888766543322222111 1111
Q ss_pred CCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 114 NIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 114 ~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
+.+.++.++.++..+...+..++++.|.+| +++|++.+++.+...++|..++|.+.+++.+
T Consensus 329 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 329 -----AVLGLGLFFQQMLVQGIWGILPKHLGEYFP----TDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred -----HHHHHHHHHHHHHHccchhhHHHHHhhhCC----cchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556566777667777788889999777 8889999999999999999999999999987
No 141
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.09 E-value=1.1e-08 Score=113.21 Aligned_cols=177 Identities=11% Similarity=0.057 Sum_probs=125.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHH-HHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIV-ILSIVYL 99 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~-ig~il~~ 99 (691)
|.++...+..++...++++...++|.|++ ++|++..+++.+.+...++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 34555566666777788888889998885 5899999999999999999999999999999997 9988764 2333333
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.+.+..... ......+..++..++.|++.+...+ ..+...+.. +++|++++++.+...++|..++|.+.+
T Consensus 300 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-----~~~~g~~~g~~~~~~~lg~~~gp~i~g 371 (402)
T TIGR00897 300 IFTLALYYIPQ--HFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-----PKHKGAAMSVLNLSAGLSAFLAPAIAV 371 (402)
T ss_pred HHHHHHHHHHH--ccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-----cchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222221110 0000014455677777888777644 345555643 357999999999999999999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
.+.+ ..||...|.+.+++.+++.++..+
T Consensus 372 ~l~~-------~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 372 LFIG-------FFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHh-------hcchHHHHHHHHHHHHHHHHHHHH
Confidence 9887 457888888877766666555443
No 142
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.09 E-value=1.9e-09 Score=119.76 Aligned_cols=160 Identities=9% Similarity=0.032 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcC
Q psy195 35 FCYYGMRTVLSLYMHLVL---LYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAID 111 (691)
Q Consensus 35 ~~~y~i~~~l~~yl~~~l---g~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~ 111 (691)
..+......++.|+.+.+ +.+..+.|.+.++..++..++.+++|+++||+ |||+.+.++.++..++.+++.+...+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~~~ 315 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFATGP 315 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcccH
Confidence 333344445777776543 66777889999999999999999999999997 99999999888888877776654322
Q ss_pred CCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhccccccCC
Q psy195 112 PLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSL-FYFSINAGSLISTFITPIFRHDMQCFGQ 190 (691)
Q Consensus 112 ~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~-~~~~~nlG~~igp~i~~~l~~~~~~~g~ 190 (691)
+.+++.+++.+++.+...+....++.+.+| ++.++...+. ++...++|.++++.+.+++.+
T Consensus 316 -------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~------- 377 (420)
T PRK09528 316 -------LEVSILKLLHAFEVPFLLVGVFKYITLNFD----VRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD------- 377 (420)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----ccceeeeeeehHHHHHHHHHHHHHHHHHHHHH-------
Confidence 667778888999888888888888899777 6677776554 566778999999999999987
Q ss_pred CCchhHHHHHHHHHHHHHHHHHH
Q psy195 191 EACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 191 ~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
..||+..|.+.+++.++..++.+
T Consensus 378 ~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 378 SIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred hhCchHHHHHHHHHHHHHHHHHH
Confidence 46799999887766555544433
No 143
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.08 E-value=2.2e-07 Score=98.68 Aligned_cols=161 Identities=16% Similarity=0.199 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy195 34 RFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPL 113 (691)
Q Consensus 34 ~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~ 113 (691)
|...-++-+ +..-+.+++|+|.+.+|.+.++-.+...+.++++.+++.|+ |..+.+..++++..+|.++=.....
T Consensus 25 R~~itsvgP-LL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~~~--- 99 (395)
T COG2807 25 RPAITSVGP-LLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLGGL--- 99 (395)
T ss_pred chhhhhhhh-hHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcccH---
Confidence 444444434 44456778999999999999999999999999999999997 9999999999998888887665433
Q ss_pred CCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCc
Q psy195 114 NIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEAC 193 (691)
Q Consensus 114 ~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~ 193 (691)
..++.+-.+.|.|.+......|+++-+.|| ++.+..++.|..+.++|+++++.+...+.+. ..+
T Consensus 100 -----~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-----k~~~~mtglYs~sl~~~aaLaa~lavpla~~------~~g 163 (395)
T COG2807 100 -----PLLFLGTLLAGAGIAVINVLLPSLIKRDFP-----KRVGLMTGLYSTSLGAGAALAAALAVPLAQH------SGG 163 (395)
T ss_pred -----HHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-----cchhhHHhHHHHHHHHHHHHHhhhhhHHHHh------hcc
Confidence 778899999999999999999999999996 7789999999999999999999998888763 347
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh
Q psy195 194 FPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 194 w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
|+.+...=+...+++++++++-
T Consensus 164 W~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 164 WRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 9987777666667777776654
No 144
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.05 E-value=6e-09 Score=112.54 Aligned_cols=183 Identities=12% Similarity=0.067 Sum_probs=138.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
.+..|.+.+..+...-+|-++...++.|++++++.+..++|.+...+.....+..+++|+||||+ |.+|++++....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 56778888888777777778999999999999999999999999999999999999999999998 99999988888777
Q ss_pred HHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
++..++..... ....... ..++...+.+++..|.-+..+..++...|| ++.|...++.....++|++.-|...
T Consensus 296 ~~~~~l~~~~~-~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-----~~~G~v~G~vga~G~lGGf~lp~~~ 369 (417)
T COG2223 296 LAAALLSLFLT-GFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-----KETGAVTGIVGAIGGLGGFFLPLAF 369 (417)
T ss_pred HHHHHHHcccc-ccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-----hhhhHHHHHHHHhccccccchhHHH
Confidence 77776655421 0100011 444444555566666666667777777774 5788899999889999988888888
Q ss_pred HHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
+...+. ..++..+|.+.....+++.++.+..
T Consensus 370 g~~~~~------tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 370 GVSLDL------TGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHh------cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 877663 3358888888777666666554443
No 145
>PRK15075 citrate-proton symporter; Provisional
Probab=99.05 E-value=1.1e-08 Score=114.33 Aligned_cols=144 Identities=13% Similarity=0.098 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHH-HHH-H
Q psy195 30 EFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNV-LLT-V 107 (691)
Q Consensus 30 ~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~i-ll~-~ 107 (691)
.++....++++..++|.|+++.+|++..++++......++..++.+++|+++||+ |||+.+.++.++..+... .+. .
T Consensus 247 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~ 325 (434)
T PRK15075 247 VAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALSWL 325 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566777888899999988999999999988888999999999999999997 999988776544332221 111 1
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhhc
Q psy195 108 TAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSIN-AGSLISTFITPIFRH 183 (691)
Q Consensus 108 s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~n-lG~~igp~i~~~l~~ 183 (691)
...++. ....+..++.+++.|...+...++..|.+| ++.|+.+.++.+...+ +++.++|.+.+++.+
T Consensus 326 ~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p----~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 326 VAAPSF-----ARMLAVELWLSFLYGSYNGAMVVALTEVMP----AEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HcCCch-----HHHHHHHHHHHHHHHHHHhhHHHHHHHHCC----CCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 111111 233344555667777777777788899887 7889999988655444 457779999998876
No 146
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.04 E-value=1.7e-08 Score=112.68 Aligned_cols=163 Identities=11% Similarity=0.079 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHH--Hhh
Q psy195 32 CERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLT--VTA 109 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~--~s~ 109 (691)
+....+|+...++|.|+.+.+|++..+++...++..++..++.++.|+++||+ |||+.+.++.++..+...... ...
T Consensus 254 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~ 332 (432)
T PRK10406 254 AGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSALQN 332 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34667888889999999988999999999888888888888899999999997 999988776654433322211 111
Q ss_pred cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhcccccc
Q psy195 110 IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINA-GSLISTFITPIFRHDMQCF 188 (691)
Q Consensus 110 ~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nl-G~~igp~i~~~l~~~~~~~ 188 (691)
.... ...+....+..++.+...+...++.+|.|| ++.|++++++.+...++ ++..+|.+.+.+..
T Consensus 333 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp----~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~----- 398 (432)
T PRK10406 333 VSSP-----YAAFGLVMCALLIVSFYTSISGILKAEMFP----AQVRALGVGLSYAVANALFGGSAEYVALSLKS----- 398 (432)
T ss_pred CCcH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-----
Confidence 1000 111112222223344444567788899998 88999999998876554 23447777776543
Q ss_pred CCCCchhHHHHHHHHHHHHHHHH
Q psy195 189 GQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 189 g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
...|...+...++..+++++.
T Consensus 399 --~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 399 --IGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred --hCCCcHHHHHHHHHHHHHHHH
Confidence 223555555544444444443
No 147
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.01 E-value=1.1e-07 Score=105.47 Aligned_cols=150 Identities=17% Similarity=0.237 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHh----cCchhHH-HHHHHHHHHHHH
Q psy195 28 INEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADT----YLGKFLT-IVILSIVYLGGN 102 (691)
Q Consensus 28 ~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr----~lGRkk~-i~ig~il~~ig~ 102 (691)
...+...+.+..+..++..|+++..|+++..+|.+..+.-+.-++.-|+.|.++|| + ||+|- ++++.+...+..
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~-GrfRP~lL~g~ip~~i~~ 97 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRW-GRFRPWLLWGAIPFAIVA 97 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccc-ccccHHHHHHhHHHHHHH
Confidence 34455566666777889999999999999999999999999999999999999997 5 77664 555667667766
Q ss_pred HHHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 103 VLLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 103 ill~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.++..+ |.....+. ...++--++.++++.....+..++.++..+ ++++|.+..+|...+.++|.++...+.+.+
T Consensus 98 ~l~F~~--p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~---d~~ER~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 98 VLLFIT--PDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQ---DPQERASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred HHHHcC--CCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666554 22222222 556677778889999998888898888765 789999999999999999988777666554
Q ss_pred hc
Q psy195 182 RH 183 (691)
Q Consensus 182 ~~ 183 (691)
..
T Consensus 173 v~ 174 (467)
T COG2211 173 VK 174 (467)
T ss_pred HH
Confidence 43
No 148
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.01 E-value=1.1e-08 Score=113.72 Aligned_cols=162 Identities=14% Similarity=0.040 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCC---c
Q psy195 40 MRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNI---P 116 (691)
Q Consensus 40 i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~---~ 116 (691)
+..+.+.+ .+++|++..+++.......++..++.+++|+++||+ |||+.+.++.++..++.+++.......... .
T Consensus 303 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (481)
T TIGR00879 303 IMYYSPTI-FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFVTGSSKS 380 (481)
T ss_pred hHHHHHHH-HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhcccCCcccc
Confidence 33344444 456899998889999999999999999999999997 999999998887777766665321111100 0
Q ss_pred hhHHHHHHHHHHHHHhh-chhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchh
Q psy195 117 KRTFTLVGLLLIAVGTG-GIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFP 195 (691)
Q Consensus 117 ~~~~l~i~~~l~gig~G-~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~ 195 (691)
......+...+.+.+.+ ...+....+.+|.+| ++.|+...+..+...++|.+++|.+.+.+.+ ..+|+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~-------~~~~~ 449 (481)
T TIGR00879 381 SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFP----LSLRPKGISIAVAANWLANFIVGFLFPTMLE-------SIGVG 449 (481)
T ss_pred hhHHHHHHHHHHHHHHHccccCeehhhhhccCC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCcc
Confidence 01222222233332222 234566677789887 8889999999999999999999999998876 45688
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy195 196 LAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 196 ~~F~i~~~l~~l~~l~~~~ 214 (691)
..|++.+++.++++++...
T Consensus 450 ~~f~~~~~~~~~~~i~~~~ 468 (481)
T TIGR00879 450 GVFIFFGGLNVLGLIFVYF 468 (481)
T ss_pred ceehhHHHHHHHHHHHHhe
Confidence 8887777666555554433
No 149
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.01 E-value=2.9e-08 Score=112.15 Aligned_cols=183 Identities=16% Similarity=0.177 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchh--HHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKF--LTIVILSIVY 98 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRk--k~i~ig~il~ 98 (691)
|.....++..++.+-+...+......|.++++|++..+...+..+..+.+.++++++|++.||+ |.| ++++++.+++
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILW 359 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHH
Confidence 4455556666777788888889999999999999999999999999999999999999999997 999 8888877666
Q ss_pred HHHHHHHHHhhcCCC-CCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 99 LGGNVLLTVTAIDPL-NIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 99 ~ig~ill~~s~~~~~-~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
.+..+.-.+...+.. .....+.+++.-++.|+..|..++..-++.++..| +++.+.+++++.+..-..+.+||++
T Consensus 360 ~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP----~g~e~efFgly~i~gk~ss~lGPll 435 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIP----PGREAEFFGLYAITGKASSWLGPLL 435 (477)
T ss_pred HHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCC----CchhhHHHHHHHHHHHHHHHHHHHH
Confidence 333222222101111 01112677888889999999999999999999887 7778999999999999999999999
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
.+.+.+. ..+-|.++....++.+++++++..
T Consensus 436 ~g~i~~~------tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 436 FGLITDA------TGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHH------hCCchhHHHHHHHHHHHHHHHHhh
Confidence 9988774 334677887777777777666543
No 150
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.00 E-value=2.8e-08 Score=113.09 Aligned_cols=178 Identities=10% Similarity=0.062 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 24 FFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFH-IWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 24 ~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~-~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
+.+.+..++...+.+....+.+.|+.+.+|++..+.+.+.. ...++..++.+++|+++||+ ||||.+.++.++..++.
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33333334444555555667788888889999999999875 55679999999999999998 99998877666555544
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
+.+........ ....+.+..++..++.|...+...++..+..+ ++.+++.+++.+...++|..+++.+.|++.
T Consensus 304 l~~~~l~~~~~---~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~----~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~ 376 (491)
T PRK11010 304 AGYWLLSITDK---NLYSMGAAVFFENLCGGMGTAAFVALLMTLCN----KSFSATQFALLSALSAVGRVYVGPVAGWFV 376 (491)
T ss_pred HHHHHHHhccc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222111000 00333444555455555555666677777665 566688889888889999988888889888
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHhhc
Q psy195 183 HDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGK 216 (691)
Q Consensus 183 ~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~ 216 (691)
+ ..||+..|.+.+++.+++++.....+
T Consensus 377 ~-------~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 377 E-------AHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred H-------HhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 46799888887777777665554443
No 151
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.97 E-value=2.9e-08 Score=106.52 Aligned_cols=152 Identities=10% Similarity=0.045 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMR-TVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~-~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
+.++.++...++....+.+.. ...|.|.++.+|.+..+.+.+.....++..++.++.|+++||+ |||+.+..+.++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 344445555555555555555 6678888777999999999999999999999999999999997 99999888766666
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++..+...... +. +.+++..++.|++.+...+...+++.|.+| +++|++..+..+...++|..++|.+++
T Consensus 289 ~~~~~~~~~~~-~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~g~~~~g 358 (365)
T TIGR00900 289 LAILVVGLTPP-NF-----PLFLVLWFAIGVGYGPINVPQGTLLQRRVP----AELLGRVFGAQFSLSHAAWPLGLILAG 358 (365)
T ss_pred HHHHHHHhhch-hH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555544321 11 667788889999999999999999999777 899999999999999999999999999
Q ss_pred Hhhc
Q psy195 180 IFRH 183 (691)
Q Consensus 180 ~l~~ 183 (691)
.+.+
T Consensus 359 ~l~~ 362 (365)
T TIGR00900 359 PLAD 362 (365)
T ss_pred HHHH
Confidence 8876
No 152
>PRK10504 putative transporter; Provisional
Probab=98.97 E-value=4.2e-08 Score=110.49 Aligned_cols=154 Identities=10% Similarity=0.008 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.+...++..++...++.......|.|++..+|.++.+++++.....++..++.++.|+++||+ |||+++.++.++..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3445555556666666555556677888877999999999999888888888999999999998 999999988887777
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
+..++........ ...+.+..++.|++.+...+....+..+.+| ++.++..+++.++...+|..+|+.+++.
T Consensus 340 ~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 411 (471)
T PRK10504 340 VSLLFMLVALLGW----YYLLPFVLFLQGMVNSTRFSSMNTLTLKDLP----DNLASSGNSLLSMIMQLSMSIGVTIAGL 411 (471)
T ss_pred HHHHHHhcccccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----HHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 7665554321100 0334455667788888888888888888776 7899999999999999999999999887
Q ss_pred hhc
Q psy195 181 FRH 183 (691)
Q Consensus 181 l~~ 183 (691)
+.+
T Consensus 412 ll~ 414 (471)
T PRK10504 412 LLG 414 (471)
T ss_pred HHH
Confidence 654
No 153
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.96 E-value=1.9e-08 Score=111.73 Aligned_cols=165 Identities=13% Similarity=0.101 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHH-HHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHL-VLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLT-IVILSIVYL 99 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~-~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~-i~ig~il~~ 99 (691)
.+|...+..++...+++++..++|.|+++ ..|.+..+++.......++..++.+++|+++||+ |||+. +....++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 45556666677777888888999999976 3578889999999999999999999999999997 87774 333333333
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.++......+ ...+++..+.++|.....+.......|.+| +++|+.++++.+...++|.+++|.+.+
T Consensus 322 ~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 322 AGWLLASATDHN-------LIQLLGIIMASMGSFSAMAIFWTTPDQSIS----LQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred HHHHHHHhcCCH-------HHHHHHHHHHHHHhhhhhhHHHhhcccccc----hHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 333222111110 222222233333333333333344456565 889999999999999999999999998
Q ss_pred HhhccccccCCCCchhHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALL 204 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l 204 (691)
.+.+. ..+|+.+|.+.+++
T Consensus 391 ~i~~~------~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 391 ILKDA------TGSFNSGLWFVAAL 409 (412)
T ss_pred ccccc------CCCCchhHHHHHHH
Confidence 88763 23588888765553
No 154
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.95 E-value=1e-07 Score=105.29 Aligned_cols=153 Identities=7% Similarity=-0.153 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
++...+...+....++......|.|+.+.+|+++.+.+.......++..++.++.|+++||+ |||+.+.++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44444444444444445555678888888999999999888878888899999999999998 99999999888777777
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
.++....... ......++++.++.|+|.+...+........ . +++++|+..+..++...+|..+|+.+.+.+.
T Consensus 296 ~~~~~~~~~~--~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~----~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~ 368 (406)
T PRK15402 296 LLAALATVIS--SHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-S----SDVSKGTVSAAMGMLSMLIFTVGIELSKHAY 368 (406)
T ss_pred HHHHHHHHcc--cccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-h----ccccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7665532100 0001456678888899988877666554433 1 2478899999999999999999999999886
Q ss_pred c
Q psy195 183 H 183 (691)
Q Consensus 183 ~ 183 (691)
+
T Consensus 369 ~ 369 (406)
T PRK15402 369 L 369 (406)
T ss_pred c
Confidence 6
No 155
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.95 E-value=4.4e-08 Score=106.66 Aligned_cols=176 Identities=14% Similarity=0.136 Sum_probs=135.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+.++......++...+.|...+++..++++..|++....+++...+.++..++.+++|+++|| +.|+++.....+..+
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 456666777778888889999999999999999999999999999999999999999999999 788888877676666
Q ss_pred HHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTA-IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 101 g~ill~~s~-~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
..+.+.+.. .+ +...+..++.|++.+........-.++. .++.++.+.+++....|+|..+|.++++
T Consensus 289 ~~l~l~~~~~~~-------~~~~~~~~~wg~a~~~~~~~~~~~~a~~-----~p~~~~~a~sl~~aa~nlgia~GA~lGG 356 (394)
T COG2814 289 ALLALTFTGASP-------ALALALLFLWGFAFSPALQGLQTRLARL-----APDAADLAGSLNVAAFNLGIALGAALGG 356 (394)
T ss_pred HHHHHHHhcchH-------HHHHHHHHHHHHHhhhhhhHHHHHhccc-----CCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666555542 21 3444555555555555444444444442 2467888999999999999999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKP 217 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~ 217 (691)
.+.+ +.|+....++.+++.++++++.+...+
T Consensus 357 ~v~~-------~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 357 LVLD-------ALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHH-------hhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9887 567888888888887777766655443
No 156
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.94 E-value=9e-08 Score=105.00 Aligned_cols=149 Identities=9% Similarity=0.036 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++.+.+..++...++.+...+++.|+. +.|++..+.|.+.+...++..+..++.|++.||+ |+|+.+.++.++..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 34555555455555555566678888985 5899999999999988888889999999999998 999999988888777
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHH-HHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFY-FSINAGSLISTFITP 179 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~-~~~nlG~~igp~i~~ 179 (691)
+.+++.....+ +.+++..++.|++.+...+....+..++ + ++++++..+.+. ....+|..+||.++|
T Consensus 283 ~~~~~~~~~~~-------~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~g~~ig~~i~G 350 (382)
T PRK11128 283 RWGLMGSTTAL-------PWLIVIQILHCGTFTVCHLAAMRYIAAR-P----GSEVIRLQALYSALAMGGSIAIMTVLSG 350 (382)
T ss_pred HHHHHHhhhhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHC-C----HhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665544322 6677888899999998888888877774 3 455678888775 455778889999999
Q ss_pred Hhhc
Q psy195 180 IFRH 183 (691)
Q Consensus 180 ~l~~ 183 (691)
.+.+
T Consensus 351 ~l~~ 354 (382)
T PRK11128 351 FLYQ 354 (382)
T ss_pred HHHH
Confidence 9987
No 157
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.94 E-value=6.5e-08 Score=106.13 Aligned_cols=171 Identities=13% Similarity=0.113 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
.+......++...+.+....+++.|+.+.+|+++.+++.+.+...++..++.++.|+++||+ |+|+.+.++.++..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 33333333333344444456677888878999999999999999999999999999999997 99999998887777776
Q ss_pred HHHHHh-hcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 103 VLLTVT-AIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 103 ill~~s-~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
+++... ..+ +...+..++.++|.+...+.......+..+ +++.++... .+...++|..+||.+++++
T Consensus 280 ~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l 347 (382)
T PRK10091 280 LMLFFFGGMK-------TASLIFAFICCAGLFALSAPLQILLLQNAK---GGELLGAAG--GQIAFNLGSAIGAYCGGMM 347 (382)
T ss_pred HHHHHHHhhH-------HHHHHHHHHHHHHHHhhhHHHHHHHHHhCC---cchHHHHHH--HHHHHHHHHHHHHHHhHHH
Confidence 554332 111 334445555566655544444433333222 244455443 3566789999999999998
Q ss_pred hccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 182 RHDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 182 ~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
.+. ..+|+..+.+.+++.+++...+
T Consensus 348 ~~~------~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 348 LTL------GLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHc------ccCcchHHHHHHHHHHHHHHHH
Confidence 773 3568888887766655554433
No 158
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.94 E-value=3.5e-08 Score=111.11 Aligned_cols=153 Identities=16% Similarity=0.068 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
++...+..++..+++++...++|.|+++.+|+++.+++.+.....++..++.+++|++.||+ |||+.+.++.++..++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVGF 335 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHH
Confidence 44445555666677777788899999999999999999999999999999999999999997 99999999988877777
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
.++.....+.. ....+....++.|+|.|...++......+.+| +++++++.++.+...++|+.+|+.+.+.+.
T Consensus 336 ~~~~~~~~~~~---~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 336 YWRAFTFTPDT---PFLAIALPQFIRGFGMGCFFMPLTTIALSGLP----PHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred HHHhccCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----HHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76653211111 01445666788899999888777777778666 889999999999999999999999988776
Q ss_pred c
Q psy195 183 H 183 (691)
Q Consensus 183 ~ 183 (691)
+
T Consensus 409 ~ 409 (485)
T TIGR00711 409 T 409 (485)
T ss_pred H
Confidence 5
No 159
>TIGR00895 2A0115 benzoate transport.
Probab=98.93 E-value=4.2e-08 Score=106.55 Aligned_cols=145 Identities=12% Similarity=-0.009 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHH
Q psy195 24 FFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNV 103 (691)
Q Consensus 24 ~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~i 103 (691)
+.+.+..++....+++...++| ++.+++|++..+++.+.+...++..++.+++|+++||+ |||+.+....+..++..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 330 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFAVL 330 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHHHH
Confidence 3344444455566666666777 66677899999999999999999999999999999997 998554433333222222
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 104 LLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 104 ll~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
+......+ ...++..++.|++.+...+...++.+|.+| +++|++.+++.+....+|..+||.+.+++
T Consensus 331 ~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 331 VGSTLFSP-------TLLLLLGAIAGFFVNGGQSGLYALMALFYP----TAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHhhCH-------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----HHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 22211111 556677788999999999999999999887 89999999999999999999999998865
No 160
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.93 E-value=3.1e-08 Score=110.80 Aligned_cols=175 Identities=11% Similarity=0.006 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.+|...+..++.....++...++|.|+++..|++..++++....+.++..++.+++|+++||+ |+++....+..+..++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 345555555555666678888999999988999999999999999999999999999999997 7654333343222221
Q ss_pred ---HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHH-HHHHHH
Q psy195 102 ---NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGS-LISTFI 177 (691)
Q Consensus 102 ---~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~-~igp~i 177 (691)
.+++......+. ....+..++.|++.............|.+| ++.|+++.++.+...++|+ ++||.+
T Consensus 331 ~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~gg~~~gp~l 401 (438)
T TIGR00712 331 TIAVIVYWMNPAGNP-----LVDMICMIVIGFLIYGPVMLIGLHALELAP----KKAAGTAAGFTGLFGYLGGSVAASAI 401 (438)
T ss_pred HHHHHHHHhcCCCch-----HHHHHHHHHHHHHHccHHHHHHHHHHHhcC----hhheeeehhhhchHHHhhhhhhcchh
Confidence 111111111100 222333344444432222222345678776 8899999999988888764 679999
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
.+.+.+ ..||...|.+..+..+++.+..+
T Consensus 402 ~G~l~~-------~~g~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 402 VGYTVD-------FFGWDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred HHHHHH-------hccchHHHHHHHHHHHHHHHHHH
Confidence 998877 45688888776665555554443
No 161
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.92 E-value=9.1e-08 Score=102.40 Aligned_cols=159 Identities=11% Similarity=0.015 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLV--LLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~--lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
.+++..+..++...+--++..+++.|+.+. +|+++.+++...+.+.++..++.+++++++||+ |++|.+.++.++.+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 344444444444444557778899999854 799999999999999999999999999999997 99999988887777
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.++...... .....+.++.|++.+...|...+...+.+| + +.+.+.++. ....+|++++|.+.|
T Consensus 220 ~~~~l~~~~~~--------~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~----~-~~~~asai~-~~~~~Gg~i~P~l~G 285 (310)
T TIGR01272 220 LLSIGAALTHG--------YVAMWFVLALGLFNSIMFPTIFSLALNALG----R-HTSQGSGIL-CLAIVGGAIVPLLQG 285 (310)
T ss_pred HHHHHHHHcCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----h-hhhhhHHHH-HHHHhcchHHHHHHH
Confidence 76654443221 222346668899999999999998888775 2 233444443 456789999999999
Q ss_pred HhhccccccCCCCchhHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPA 202 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~ 202 (691)
.+.+ ..+.+.+|++..
T Consensus 286 ~lad-------~~g~~~a~~v~~ 301 (310)
T TIGR01272 286 SLAD-------CLGIQLAFALPV 301 (310)
T ss_pred HHHH-------hccchHHHHHHH
Confidence 8877 355677776543
No 162
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.92 E-value=3.6e-08 Score=112.24 Aligned_cols=152 Identities=10% Similarity=-0.040 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.+....+..++...++++...++|.|+++.+|+++.++|.......++..++.+++|++.||+ |||+.+..+.++..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALS 338 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 344444555556666777778899999999999999999999999999999999999999998 9999998888887777
Q ss_pred HHHHHHhhc-CCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 102 NVLLTVTAI-DPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 102 ~ill~~s~~-~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
.+++..... ++. +...+..++.|+|.|...+.......+..| +++++.+.+.++...++|+.+|+.+.+.
T Consensus 339 ~~~l~~~~~~~~~-----~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~lG~~~G~ai~g~ 409 (495)
T PRK14995 339 FYGLAMTDFSTQQ-----WQAWGLMALLGFSAASALLASTSAIMAAAP----PEKAAAAGAIETMAYELGAGLGIAIFGL 409 (495)
T ss_pred HHHHHHhcCCCch-----HHHHHHHHHHHHhHHHHHHHHHHHHHhcCC----HHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 766544211 111 445667788899999988888888888665 8899999999999999999999999887
Q ss_pred hhc
Q psy195 181 FRH 183 (691)
Q Consensus 181 l~~ 183 (691)
+.+
T Consensus 410 i~~ 412 (495)
T PRK14995 410 LLS 412 (495)
T ss_pred HHH
Confidence 755
No 163
>KOG2563|consensus
Probab=98.92 E-value=8e-07 Score=96.90 Aligned_cols=195 Identities=13% Similarity=0.094 Sum_probs=125.4
Q ss_pred CCCCchHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHH
Q psy195 16 QPKYPKAVFFIVINEFCERFCY---YGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIV 92 (691)
Q Consensus 16 ~~~~~r~~~~l~~~~~~~~~~~---y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ 92 (691)
.|.++|....++...+.. +.. +.-......|.++.+| +...+-+...+|++.+....+.+-|+.|++ |-|.+.+
T Consensus 37 ~rVy~rRW~vLl~~slL~-~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~l 113 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLN-FSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALL 113 (480)
T ss_pred cccchhHhHHHHHHHHHH-hcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHH
Confidence 345566655554444332 111 1111234556666677 777788999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHH
Q psy195 93 ILSIVYLGGNVLLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGS 171 (691)
Q Consensus 93 ig~il~~ig~ill~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~ 171 (691)
++.++.++|..+-.++..|.+.+.-. .....|-.+.+.++-.+...-+-..+-+|+ +++|..+...-.++..+|.
T Consensus 114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~----~~qra~A~~~~v~~n~LGv 189 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFP----PDQRAIATVLGVMGNPLGV 189 (480)
T ss_pred HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCC----cchhhhhhhHHHhcchHHH
Confidence 99999999999887775542221111 244556666666655544443445567888 8889999888888888888
Q ss_pred HHHHHHHHHhhccccccCCCCchhH--HHHHHHHHHHHHHHHHHhhccc
Q psy195 172 LISTFITPIFRHDMQCFGQEACFPL--AFGVPALLMFLAIIVFIIGKPM 218 (691)
Q Consensus 172 ~igp~i~~~l~~~~~~~g~~~~w~~--~F~i~~~l~~l~~l~~~~~~~~ 218 (691)
++|.++.+.+..+.++- +...|.. .|+...++..+.+++..+.++.
T Consensus 190 avg~llppilV~~~~~~-~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 190 AVGFLLPPILVPSSKDS-EDNSWLFFTLFLGVECLAALLLALVLFVFTK 237 (480)
T ss_pred HHHhhccceecCCCCCc-chhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88888877765532110 1345653 3554444444444444444433
No 164
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.92 E-value=4.2e-08 Score=111.18 Aligned_cols=175 Identities=10% Similarity=0.053 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhH-----HHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFL-----TIVILSIV 97 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk-----~i~ig~il 97 (691)
+|.+.+..++.....++...++|.|+.+++|++..+++.+.+++.++..++.+++|+++||+ |||+ ........
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 34444443333444455667789999888999999999999999999999999999999997 8762 22211111
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
.+.+..++......+. ....+..++.+++.+...+...++..+.. ++.++...++...+.++|+.+++.+
T Consensus 333 ~l~~i~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~g~~~~~g~lg~~i~~~l 402 (476)
T PLN00028 333 TLGGVFCIWLGRANSL-----GAAIVVMILFSIFVQAACGATFGIVPFVS-----RRSLGVISGLTGAGGNVGAVLTQLL 402 (476)
T ss_pred HHHHHHHHHhcccchH-----HHHHHHHHHHHHHHHHhhhhhcccCcccC-----hhhchhhhhhhhccccHHHHHHHHH
Confidence 1112111111111100 33344455556655555555555555533 4678999998777666677666655
Q ss_pred HHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhc
Q psy195 178 TPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGK 216 (691)
Q Consensus 178 ~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~ 216 (691)
.+ ... ..+|+.+|.+.+++++++.++.++.+
T Consensus 403 ~~-~~~-------~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 403 FF-TGS-------SYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HH-hcC-------CccHhhHHHHHHHHHHHHHHHHHhee
Confidence 33 111 34688899888877777766665554
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.90 E-value=1.1e-07 Score=105.32 Aligned_cols=133 Identities=16% Similarity=0.064 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCch
Q psy195 38 YGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPK 117 (691)
Q Consensus 38 y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~ 117 (691)
+.+..++|.|+.+ .|++..+.+.+.+...++..++.+++|+++||+ |||+.+..+.++..++.+++......
T Consensus 248 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~------ 319 (426)
T PRK12307 248 WPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIPQD------ 319 (426)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHccc------
Confidence 3456678888875 699999999999999999999999999999997 99999988877666555444322111
Q ss_pred hHHHHHHHHHHHHH--hhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 118 RTFTLVGLLLIAVG--TGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 118 ~~~l~i~~~l~gig--~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
....++.++.+++ ..+..+..+.++.|.+| ++.|+++.++.+...++|+.++|.+.+++.+
T Consensus 320 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 320 -NYLLLGACLFGLMATNVGVGGLVPKFLYDYFP----LEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred -cHHHHHHHHHHHHHhcccHhHHHHHHHHHhCc----HHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 1122233333332 23344567788889887 8899999999999999999999999999876
No 166
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.89 E-value=1.2e-07 Score=104.09 Aligned_cols=174 Identities=11% Similarity=-0.076 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTG-LCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i-~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
++..+...++...+......+.+.|+.+ .|++..+.|.+...... ...++.+++|++.||+ |+|+.+.++.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 4444444555556666666778888875 79999999998888764 5667789999999997 9999998877655333
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.+............ .....+....+.+++.|...+...+...+..+ +++.+++.++..+...++|..+||.+++.+
T Consensus 288 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l 363 (390)
T TIGR02718 288 ALLWFAQAAFWLAP-GIAVAWSCSAFGSLITGITSVAIYTAFMRFAG---DGDQAGTDVTAVQSTRDLGELIASSIAGYL 363 (390)
T ss_pred HHHHHHHHHcccCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---cccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222111100000 00223334444556677777777777777554 237889999999999999999999999999
Q ss_pred hccccccCCCCchhHHHHHHHHHHHHHH
Q psy195 182 RHDMQCFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 182 ~~~~~~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
.+ ..||+..|.+.+++.++++
T Consensus 364 ~~-------~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 364 TD-------RFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HH-------HHccHHHHHHHHHHHHHHH
Confidence 87 4568888887666555544
No 167
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.89 E-value=1.2e-07 Score=102.58 Aligned_cols=151 Identities=13% Similarity=0.046 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCc-hhHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLG-KFLTIVILSIVYL 99 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lG-Rkk~i~ig~il~~ 99 (691)
+.++.+.+..++....+++...++|.|+++ .|++..+++.+.+...++..++.++.|+++||+ | ||+++.++.++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~-~~~~~~~~~~~~~~~ 274 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRV-KDQRGIVAVLAVLQL 274 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh-ccchHHHHHHHHHHH
Confidence 345555555555567777888889999875 799999999999999999999999999999997 5 5556667777777
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.+.+...... ... ...++.|++.|...+...+...+..+ ++++++...++.+...++|.+++|.+.+
T Consensus 275 ~~~~~~~~~~~~-------~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~gp~~~G 343 (355)
T TIGR00896 275 VGLCGLLFAPMH-------GLW-AWALVLGLGQGGAFPLALTLIGLRSR---QAAQAAALSAMAQSIGYLLAALGPLFVG 343 (355)
T ss_pred HHHHHHHHhhhh-------HHH-HHHHHHHHhhhhHhHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776655543211 212 24567899999988887777766443 3567788888888888899999999999
Q ss_pred Hhhcc
Q psy195 180 IFRHD 184 (691)
Q Consensus 180 ~l~~~ 184 (691)
++.+.
T Consensus 344 ~l~~~ 348 (355)
T TIGR00896 344 VLHDI 348 (355)
T ss_pred HHHHH
Confidence 98773
No 168
>KOG4686|consensus
Probab=98.89 E-value=6.8e-08 Score=98.78 Aligned_cols=155 Identities=14% Similarity=0.110 Sum_probs=124.1
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHH
Q psy195 15 EQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVIL 94 (691)
Q Consensus 15 ~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig 94 (691)
..+.....+|++.++..+..++.+-....-+.++++.+|+|+..++.+.+.....+.+.+++.|.++|++ ||+-....+
T Consensus 258 dv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~ 336 (459)
T KOG4686|consen 258 DVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVAS 336 (459)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHH
Confidence 3445566788887777666565555555678899999999999999999999999999999999999998 998876665
Q ss_pred HH-HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHH
Q psy195 95 SI-VYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLI 173 (691)
Q Consensus 95 ~i-l~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~i 173 (691)
.. ...++...++++. +.-+++..++|+.+.+...+..+.++-..| .++.|++++..+...|+|-++
T Consensus 337 a~~~tl~~H~~l~Ft~---------lsPy~~m~~lGLsysllAcslWP~va~~vp----E~qLGTaygf~qsIqNLgla~ 403 (459)
T KOG4686|consen 337 ACILTLLGHSGLFFTF---------LSPYTSMTFLGLSYSLLACSLWPCVASLVP----EEQLGTAYGFIQSIQNLGLAF 403 (459)
T ss_pred HHHHHHHHhhhHHhhh---------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCC----HHHhcchHHHHHHHHhhhhhH
Confidence 44 4455666666543 234677888888888776667777777776 788999999999999999999
Q ss_pred HHHHHHHhhc
Q psy195 174 STFITPIFRH 183 (691)
Q Consensus 174 gp~i~~~l~~ 183 (691)
.|++++.+.+
T Consensus 404 i~Iiag~i~d 413 (459)
T KOG4686|consen 404 IPIIAGFIAD 413 (459)
T ss_pred Hhhhhheeec
Confidence 9999999877
No 169
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.88 E-value=4.2e-06 Score=89.57 Aligned_cols=150 Identities=17% Similarity=0.190 Sum_probs=99.7
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q psy195 50 LVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIA 129 (691)
Q Consensus 50 ~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~g 129 (691)
++.|+++.+.+.+...-...+.+..++.|.++||+ ||||..++.++++.++++.--... + ..++++|++.|
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~~~---~-----~~L~~GRvlgG 132 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHSSN---Y-----PVLLLGRVLGG 132 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhccc---c-----HHHHHHHHHHH
Confidence 57899999999999999999999999999999998 999999999999988886544333 3 88999999999
Q ss_pred HHhhchhhhhhhhhhccCCC-cchhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHH
Q psy195 130 VGTGGIKPCVSSFGGDQFIV-PEQSAQLEKFFSLFY-FSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFL 207 (691)
Q Consensus 130 ig~G~~~~~~~~~~ad~fp~-~~~~~~rg~~~~~~~-~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l 207 (691)
+++.....+--++......+ .-+++..+..++... +...+-++++..++-++.+. + ..+-..+|..+.++.++
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~---~--~~g~vaPF~~a~~~l~~ 207 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW---F--GFGPVAPFDAAIVLLAV 207 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH---h--CCCCcchHHHHHHHHHH
Confidence 99999888777765542210 111333444444332 11222222233333333331 1 12235678777776666
Q ss_pred HHHHHH
Q psy195 208 AIIVFI 213 (691)
Q Consensus 208 ~~l~~~ 213 (691)
+.++..
T Consensus 208 ~~~~I~ 213 (354)
T PF05631_consen 208 AAVLIL 213 (354)
T ss_pred HHHHHH
Confidence 655443
No 170
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.88 E-value=3e-08 Score=107.32 Aligned_cols=173 Identities=11% Similarity=0.150 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
.+...++..++.+=+..++......|....+|++..+...+-....+.+.++++++|+|+||+ |.|+++.++.+++.+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 555555666666666667777888999999999999999999999999999999999999997 9999999998888777
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
++...+...+ .-+++.-++.|...|..++..=++.++..| +++-+++++++.+....++.+||++.+.+
T Consensus 332 ~~~~~~~~~~-------~~f~i~gll~g~s~G~~qA~SRSy~~~lvp----~~k~~~fFglyaltgra~S~~gp~lv~v~ 400 (438)
T COG2270 332 ALYLIFLEGE-------LDFWILGLLVGTSLGGAQASSRSYLARLVP----KGKEGRFFGLYALTGRAASFLGPFLVAVI 400 (438)
T ss_pred HHHHHHcccc-------HHHHHHHHHHHHhcchHHHHHHHHHHHhCC----CccccceeehhhhhhhHHHHHHHHHHHHH
Confidence 6655554332 556667788899999999999999999887 78889999999999999999999999987
Q ss_pred hccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 182 RHDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 182 ~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
.+. ..+-|.++....++..++++++
T Consensus 401 t~i------Tg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 401 TQI------TGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHH------hcchhhHHHHHHHHHHhhHhhE
Confidence 663 3346777666565555555544
No 171
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.86 E-value=1e-07 Score=105.01 Aligned_cols=170 Identities=9% Similarity=0.059 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVL---LYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~l---g~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
++.+++..++....+......++.|+.+.+ +.+....|.+.++..+...++.++.|++.||+ |||+.+.++.++..
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 217 FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHH
Confidence 344444333433444445456788887654 56667788888888888899999999999997 99999999888877
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHH-HHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSL-FYFSINAGSLISTFIT 178 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~-~~~~~nlG~~igp~i~ 178 (691)
++..+......+ +.+++..++.|++.+...+....+..+.++ ++.++...+. ++....+|+.+++.+.
T Consensus 296 l~~~~~~~~~~~-------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~at~~~~~~~~~~~lg~~~~~~l~ 364 (396)
T TIGR00882 296 VRIIGSSFATTA-------LEVVILKMLHAFEVPFLLVGCFKYITSQFD----VRLSATIYLIGFQFAKQLAMIFLSTLA 364 (396)
T ss_pred HHHHHHHhcCCh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----cceEEEeehHHHHHHHHHHHHHHHHhH
Confidence 777665543222 556777888888877665555566666554 5555665554 5578899999999999
Q ss_pred HHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
+++.+ ..||+.+|.+.+++.++..++
T Consensus 365 G~l~~-------~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 365 GNMYD-------SIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHH-------hcccHHHHHHHHHHHHHHHHH
Confidence 99987 467898988877766555443
No 172
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.85 E-value=5.5e-08 Score=104.72 Aligned_cols=161 Identities=10% Similarity=0.093 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHH--HHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSI--VYL 99 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~i--l~~ 99 (691)
.++.+.+..++......++..+++.|+.+.+|++..+++.+.+.+.++..++.+++|+++||+.+||+....... ...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 445555555566666667778899999999999999999999999999999999999999985234433222111 111
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++..........+ .....+..++.|+..+...+....+..|.+| +++|+++.++.+...++|..++|.+.+
T Consensus 297 ~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~g~~~~~~~~g 367 (379)
T TIGR00881 297 VSLLVYWLNPAAN-----PLMDLICLFALGFLVYGPQMLIGVIASELAP----KKAAGTAAGFVGFFAYLGGILAGLPLG 367 (379)
T ss_pred HHHHHHhcCcchh-----HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcC----cchhHHHHHHHHHhhhhhhhhhhhhHH
Confidence 1111111110110 0334455555665555555666778889776 889999999999999999999999999
Q ss_pred HhhccccccCCCCchhHHH
Q psy195 180 IFRHDMQCFGQEACFPLAF 198 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F 198 (691)
.+.+ ..||+..|
T Consensus 368 ~l~~-------~~g~~~~f 379 (379)
T TIGR00881 368 YLAD-------GFGWAGAF 379 (379)
T ss_pred HHHH-------hhcccccC
Confidence 9887 45676543
No 173
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.85 E-value=8.5e-08 Score=106.59 Aligned_cols=155 Identities=14% Similarity=0.121 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++.+++..++...+++......+.|.+..++ +....+.+.....++..++.++.|+++||+ |||+++.++.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 445555555666666665544444555544455 566677777888899999999999999998 999999999888877
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCC---cchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIV---PEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~---~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
+.+++.+... +. ..+.+..++.+++.+...+...++++|..+. .++++++|..++.+.+...+|..+++.+
T Consensus 300 ~~~~~~~~~~-~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i 373 (437)
T TIGR00792 300 GYLIFFFAGS-NL-----PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFL 373 (437)
T ss_pred HHHHHHHcch-hH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 7766654321 01 4556677788899999889999999997651 1235567999999999999999999999
Q ss_pred HHHhhc
Q psy195 178 TPIFRH 183 (691)
Q Consensus 178 ~~~l~~ 183 (691)
.+.+.+
T Consensus 374 ~g~ll~ 379 (437)
T TIGR00792 374 VGLILG 379 (437)
T ss_pred HHHHHH
Confidence 998765
No 174
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.84 E-value=2.9e-07 Score=100.00 Aligned_cols=148 Identities=12% Similarity=0.127 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
++...+...+....++....+.|.|+.+.+|+++.+++.+.....++..++.+++|+++||+ |||+.+.++.++..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33334444444455566666778888888999999999999999999999999999999997 99999998887777776
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHH-HHHHHHHHH
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINA-GSLISTFIT 178 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nl-G~~igp~i~ 178 (691)
+++.....+... ....+++..++.|+|.+...+.......|.+| +++++..+..+..... |++.++.++
T Consensus 287 ~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 287 VLLEITAILGLG--SWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-----HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-----ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 665543211100 00344555667888888888888888888553 4678888887776654 555555443
No 175
>PRK10133 L-fucose transporter; Provisional
Probab=98.84 E-value=1.9e-07 Score=104.73 Aligned_cols=162 Identities=14% Similarity=0.080 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 24 FFIVINEFCERFCYYGMRTVLSLYM-HLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 24 ~~l~~~~~~~~~~~y~i~~~l~~yl-~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
+...+..++...+.++...+++.|+ ++.+|+++.+++.....+.++..++.+++|+++||+ |||+++.++.++..++.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 261 RWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 3334444555566666667788886 557899999999999999999999999999999997 99999988877666555
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
++..+... ...+.+..+.|+|.+...|+..+...+.++ ++.+.+.++..+ ..+|+.++|.+.+.+.
T Consensus 340 ~~~~~~~~--------~~~~~~~~l~glg~~~i~P~~~s~a~~~~~-----~~~~~as~l~~~-~~~g~~~~~~i~G~l~ 405 (438)
T PRK10133 340 LISAFAGG--------HVGLIALTLCSAFMSIQYPTIFSLGIKNLG-----QDTKYGSSFIVM-TIIGGGIVTPVMGFVS 405 (438)
T ss_pred HHHHHcCC--------hHHHHHHHHHHHHHHHHHHHHHHHHHcccc-----hhhccchhHHhH-HhccchHHHHHHHHHH
Confidence 44433211 222456778899999999999999999775 223444444433 3357777888888876
Q ss_pred ccccccCCCCc-hhHHHHHHHHHHHH
Q psy195 183 HDMQCFGQEAC-FPLAFGVPALLMFL 207 (691)
Q Consensus 183 ~~~~~~g~~~~-w~~~F~i~~~l~~l 207 (691)
+ ..| -+.+|.++.+..+.
T Consensus 406 ~-------~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 406 D-------AAGNIPTAELIPALCFAV 424 (438)
T ss_pred H-------hccchHHHHHHHHHHHHH
Confidence 6 344 56777665544333
No 176
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.84 E-value=2.1e-07 Score=104.81 Aligned_cols=180 Identities=17% Similarity=0.125 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHH--------H
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTI--------V 92 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i--------~ 92 (691)
+.+|...+..++...+++....++|.|+.+.+|++..++++..++..++..++.+++|+++||+ ++|+.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 4567777777788888888889999999999999999999999999999999999999999996 654211 1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHH
Q psy195 93 ILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSL 172 (691)
Q Consensus 93 ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~ 172 (691)
.+......+..++........ ....++...+.+.+.+...+.......|.. ++.+|...++.+...++|+.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~g~~~~~~~l~~~ 410 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYLSAA----FYLTIIILTLANAVSSGPLAGVLINSLDLA-----PRFLGFIKGITGLPGFIGGL 410 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCc----hHHHHHHHHHHHHHhhhhhhhhhhchhhcC-----hhHHHHHHHHHHHHHHHHHH
Confidence 111111111111111111100 022333444444444444444444444533 35899999999999999999
Q ss_pred HHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 173 ISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 173 igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
++|.+.+++.+.. + ..+|...|.+.+++.+++.++...
T Consensus 411 i~p~l~g~~~~~~---~-~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 411 IASTLAGNILSQD---S-KNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHhhheeeCCC---C-chHHHHHHHHHHHHHHHHHHHeee
Confidence 9999988876520 0 134888888887777776655443
No 177
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.83 E-value=9.8e-08 Score=119.31 Aligned_cols=149 Identities=15% Similarity=0.083 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEK-TATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~-~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
++..++..++.....+....+++.|+.+.+|++.. .++++.+...++..++.+++|+++||+ ++++.+.++.++..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHH
Confidence 34444444444444555667789999999999999 999999999999999999999999997 9999888887777776
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.+++..... . +.++++.++.|++.++..+...+++.+..| ++.|++++++.++..++|.++++.+++.+
T Consensus 313 ~~~~~~~~~--~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p----~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 313 LFLLPTAPS--L-----ASVLVLFFLFGFSAGLFIVPLNALIQFRAP----EKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHhhh--H-----HHHHHHHHHHHHHHHHhhHHHHHHHhhcCC----ccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 666654321 1 556677888899999988888999999776 88999999999999999998888777765
Q ss_pred hc
Q psy195 182 RH 183 (691)
Q Consensus 182 ~~ 183 (691)
..
T Consensus 382 ~~ 383 (1146)
T PRK08633 382 SG 383 (1146)
T ss_pred HH
Confidence 43
No 178
>KOG2325|consensus
Probab=98.82 E-value=3.6e-07 Score=101.83 Aligned_cols=159 Identities=15% Similarity=0.192 Sum_probs=126.2
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCch-hHHH
Q psy195 14 SEQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHL-VLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGK-FLTI 91 (691)
Q Consensus 14 ~~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~-~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGR-kk~i 91 (691)
++-+.+||++++..+..+...+.++...+..-.|+++ +.+-+...-|+++++..++..++.+..|+-+.|. |+ |+-+
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pl 105 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPL 105 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCH
Confidence 3445678999999888888877777666666778764 3677778889999999999999999999999997 75 7778
Q ss_pred HHHHHHHHHHHHHH-HHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHH
Q psy195 92 VILSIVYLGGNVLL-TVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAG 170 (691)
Q Consensus 92 ~ig~il~~ig~ill-~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG 170 (691)
+.|.++.++|.++. ++...|+- ..+.+.++|++.|+|.|.. +..-+|+++ .+..++|.++++....+..+|
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~---~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~----~s~~~dR~rA~a~~~~~~vlg 177 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNG---VKYLMLVARILTGVGVGNF-AVLRAYIAD----ASTVEDRPRAFAATSGGFVLG 177 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc---hHHHHHHHHHHcCcCcccH-HHHHHHHHh----ccCccchHHHHHHhhhHHHHH
Confidence 88999999999998 55544431 1288999999999998875 567888998 455778888888887777778
Q ss_pred HHHHHHHHHHh
Q psy195 171 SLISTFITPIF 181 (691)
Q Consensus 171 ~~igp~i~~~l 181 (691)
..+||.+...+
T Consensus 178 ~ilGp~~q~~f 188 (488)
T KOG2325|consen 178 IILGPTIQLAF 188 (488)
T ss_pred HHHhHHHHHHH
Confidence 88887766544
No 179
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.82 E-value=3e-07 Score=105.16 Aligned_cols=169 Identities=10% Similarity=0.107 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHH
Q psy195 26 IVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLL 105 (691)
Q Consensus 26 l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill 105 (691)
++...++..+....+...+|.+..+.+|.++...|++.+++.+|+.++.++.+++.+++ ++++.+..+.+++.++++.+
T Consensus 223 ~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 223 VLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHH
Confidence 33333333444445556788999999999999999999999999999999999999997 99999988888777777776
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy195 106 TVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDM 185 (691)
Q Consensus 106 ~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~ 185 (691)
+++... +...++.++.|++.........+..-+..| ++.||+.++.+++....+..+|.++.|.+.+
T Consensus 302 al~~~~-------~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P----~~~~GRv~si~~~~~~g~~~lGsll~G~la~-- 368 (524)
T PF05977_consen 302 ALSPSF-------WLALIALFLAGAAWIIANSSLNTLVQLSVP----DWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD-- 368 (524)
T ss_pred hcchHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 665322 666777888898888887777777777555 9999999999999999999999999999877
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 186 QCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 186 ~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
..|.+..+.++++.++++.++..
T Consensus 369 -----~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 369 -----HFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred -----HhCHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777665555554443
No 180
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.82 E-value=5.1e-07 Score=99.75 Aligned_cols=167 Identities=12% Similarity=-0.016 Sum_probs=114.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+.++......++...++++...+++.++.+++|++..+++.+...+.++..++.++.|++.||. +|+..+. +.++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~-~~~~~~~ 293 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAG-APLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHH-HHHHHHH
Confidence 3344444444444555555556664444567899999999999999999999999999999995 5554444 3333333
Q ss_pred -HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 -GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 101 -g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
+.++......+ +.+.++.++.|++.+...+..++++.+..| +++++..+......++|..+|+.+++
T Consensus 294 ~~~~l~~~~~~~-------~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~lg~~~G~~l~G 361 (394)
T PRK10213 294 SALVLTLWGSDK-------IVATGVAIIWGLTFALVPVGWSTWITRSLA-----DQAEKAGSIQVAVIQLANTCGAAIGG 361 (394)
T ss_pred HHHHHHHHhhhH-------HHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-----ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332222211 556677888899999999988888887664 33456666667778899999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALLMFLA 208 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l~~l~ 208 (691)
++.+ ..|++..+..++++.++.
T Consensus 362 ~l~~-------~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 362 YALD-------NIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHh-------ccChhhHHHHHHHHHHHH
Confidence 9987 456777777665544433
No 181
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.82 E-value=1e-05 Score=87.94 Aligned_cols=130 Identities=12% Similarity=0.103 Sum_probs=95.1
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCc-----hhH-HHHHHHHHHHHHHHHHHHhh--cCC----CCC
Q psy195 48 MHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLG-----KFL-TIVILSIVYLGGNVLLTVTA--IDP----LNI 115 (691)
Q Consensus 48 l~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lG-----Rkk-~i~ig~il~~ig~ill~~s~--~~~----~~~ 115 (691)
+..+++++....+..++.....+. ..+..|+.||+. + ||- =+..|.++...|..+.+.+. ... ...
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 345789999999988877776655 688999999997 6 444 34556666666655554442 111 011
Q ss_pred chh---HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 116 PKR---TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 116 ~~~---~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
+.. ....++..+.|+|.+...++..++++|..| +++|++..++.+...-+|.+++..+.+.+.+
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~----e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~ 150 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAP----EERRPRVVAIVWVMLIVGIIVSAIVFGRLLD 150 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCC----HhhhhhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 111 344556667888998999999999999655 9999999999999999999999999887765
No 182
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.81 E-value=3.8e-07 Score=102.74 Aligned_cols=160 Identities=11% Similarity=0.060 Sum_probs=108.8
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHH
Q psy195 43 VLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTL 122 (691)
Q Consensus 43 ~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~ 122 (691)
+.|.+ .+.+|++...++.......++..++.+++|+++||+ |||+.+.++.++..++.+++......... .....
T Consensus 293 ~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~~~---~~~~~ 367 (479)
T PRK10077 293 YAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQAP---GIVAL 367 (479)
T ss_pred HHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcCcc---cHHHH
Confidence 33444 356888887777777778888899999999999998 99999999998888887776543211110 02333
Q ss_pred HHHHHHHHHhhc-hhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHH
Q psy195 123 VGLLLIAVGTGG-IKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVP 201 (691)
Q Consensus 123 i~~~l~gig~G~-~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~ 201 (691)
.+.++.+.+.+. ..|...++.+|.+| ++.|+.+.++.+...++|.++++.+.+.+... +..-+..+|+..|++.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p----~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~ 442 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFP----NAIRGKALAIAVAAQWIANYFVSWTFPMMDKN-SWLVAHFHNGFSYWIY 442 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCC----hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-cchhhhccCccHHHHH
Confidence 344445555543 34677899999887 88999999999999999999887776654310 0000035677777776
Q ss_pred HHHHHHHHHHH
Q psy195 202 ALLMFLAIIVF 212 (691)
Q Consensus 202 ~~l~~l~~l~~ 212 (691)
+++.++++++.
T Consensus 443 ~~~~~~~~~~~ 453 (479)
T PRK10077 443 GCMGVLAALFM 453 (479)
T ss_pred HHHHHHHHHHH
Confidence 65555444443
No 183
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.78 E-value=1.5e-07 Score=117.83 Aligned_cols=172 Identities=13% Similarity=0.012 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+.++...+..++..+.+.++..++|.|+.+.+|.+..++|++.+.+.++..++.+++|+++|+. ++++.+.++.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 3455555555555666667778899999999999999999999999999999999999999986 777766666555544
Q ss_pred HHHHHHHhhc----CCC--------C-CchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAI----DPL--------N-IPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSI 167 (691)
Q Consensus 101 g~ill~~s~~----~~~--------~-~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~ 167 (691)
+.+.+.+... +.. . ....+.+.++.++.|++.|...+...+++.+..| ++.||++++..++..
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p----~~~~G~v~g~~~~~~ 379 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWAN----PAHRARVIAANNVLN 379 (1140)
T ss_pred HHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCC----cccceeeeHHHHHHH
Confidence 4443332100 000 0 0011566778888999999999999999999776 899999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHH
Q psy195 168 NAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPAL 203 (691)
Q Consensus 168 nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~ 203 (691)
.+|..+++++.+.+... ..++...|.+.++
T Consensus 380 ~~~~~ig~~~~g~l~~~------~~~~~~~~~~~~~ 409 (1140)
T PRK06814 380 AAFMVAGTIILALLQAL------GFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHh------ccCHHHHHHHHHH
Confidence 99999999998887641 2345555554444
No 184
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.73 E-value=9.6e-05 Score=83.77 Aligned_cols=114 Identities=17% Similarity=0.078 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHH-HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchh
Q psy195 58 TATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSI-VYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIK 136 (691)
Q Consensus 58 ~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~i-l~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~ 136 (691)
..+...++..+...+..|+.|-++|+- |+||.++.... +..+.+.++.+. .|.- .....+..++..++.+...
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v-~~~~----~~~~~~l~iia~v~~~~~~ 144 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFV-SPGQ----WWLALVLFIIANVGYEASN 144 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHh-Ccch----HHHHHHHHHHHHHHHHHHH
Confidence 345677888888889999999999997 88777665544 334445555443 1211 0222333334456777777
Q ss_pred hhhhhhhhccCCCcchhhhH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 137 PCVSSFGGDQFIVPEQSAQL--------------------------EKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 137 ~~~~~~~ad~fp~~~~~~~r--------------------------g~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
....+++.|.-+ ++++ ++..++-+...++|+++...++..+
T Consensus 145 vfyna~LP~la~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~ 211 (477)
T PF11700_consen 145 VFYNAYLPDLAR----PEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLL 211 (477)
T ss_pred HHHHHHhHhhcC----CChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888665 3333 7888888788888888877766554
No 185
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.72 E-value=7.5e-07 Score=99.95 Aligned_cols=181 Identities=9% Similarity=0.020 Sum_probs=117.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+..|++.+..++...+|.+...++|.|+++.+ +...+.....+..+...++.+++|+++||+ |++|++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 34677777777766666677778999988754 444333334556778889999999999997 999999998876666
Q ss_pred HHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCc------------------chhhhHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVP------------------EQSAQLEKFFS 161 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~------------------~~~~~rg~~~~ 161 (691)
........ .|.-. ... ..+.++.+.+.++.|.-++.+..++.+.|| . ..+++.|...|
T Consensus 329 ~~~~~~l~-lp~~~-~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G 405 (462)
T PRK15034 329 FSALLFLT-LPGTG-SGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFR-QITIYRVKMKGGSDEQAQREAVTETAAALG 405 (462)
T ss_pred HHHHHHHH-hcccc-ccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHh-hhhhhcccccccchhHHhhHHHHHHHHHHH
Confidence 55332221 12100 011 444555555556666666666666666665 2 01125678888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 162 LFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 162 ~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
+......+|+++-|.+.+...+. ..++..+|+...+..++++++.+
T Consensus 406 ~v~a~G~~Ggf~~p~~~g~~~~~------~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 406 FISAIGAVGGFFIPQAFGMSLNM------TGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHHHHHcccchhhHHHHHHHHH------cCCcHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888776766553 34577777776666555554433
No 186
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.71 E-value=3.1e-07 Score=99.37 Aligned_cols=140 Identities=13% Similarity=0.085 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWT-GLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~-i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
++.+.+..++...+++....+++.|+++ +|++..+.+.+.++.. ++..++.+++|+++||+ |||+.+.++.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 5555555566677888888889999987 9999999998887766 57789999999999997 9999998888777766
Q ss_pred HHHHHHhh-cCC---CCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHH
Q psy195 102 NVLLTVTA-IDP---LNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSIN 168 (691)
Q Consensus 102 ~ill~~s~-~~~---~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~n 168 (691)
..+..... ... ...+..+.+..+.++.+++.+...+...++..+.+| +++||+.+++++...+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p----~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 289 NAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSN----PKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcC----CCccHHHHHHHHHHHh
Confidence 55444321 100 000011556667778899999999999999999887 9999999999877655
No 187
>PRK09848 glucuronide transporter; Provisional
Probab=98.71 E-value=2.3e-07 Score=104.01 Aligned_cols=156 Identities=17% Similarity=0.170 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++...+..++...++.......+.|+++.+|.+....+.......++..++.++.++++||+ |+|+++.+|.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4455555555666666666656667777777888777666555555667788999999999997 999999999988888
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcc----hhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPE----QSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~----~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
+.+++.+....+. +.+++..++.++|.+...+...++.+|..| .. +.++.|..++.+.+...+|..+|+.
T Consensus 307 ~~~~~~~~~~~~~-----~~~~~~~~l~g~G~~~~~~~~~al~~~~~~-~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 307 GYLLFFWVSVWSL-----PVALVALAIASIGQGVTMTVMWALEADTVE-YGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HHHHHHHcCchhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 8776654321111 556667788899999999999999999665 21 1234688999999999999999999
Q ss_pred HHHHhhc
Q psy195 177 ITPIFRH 183 (691)
Q Consensus 177 i~~~l~~ 183 (691)
+.+.+.+
T Consensus 381 i~g~~l~ 387 (448)
T PRK09848 381 IPAFILG 387 (448)
T ss_pred HHHHHHH
Confidence 8887654
No 188
>KOG3626|consensus
Probab=98.71 E-value=5.5e-06 Score=96.16 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhc---C----
Q psy195 39 GMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAI---D---- 111 (691)
Q Consensus 39 ~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~---~---- 111 (691)
+.......-+.+.++++..+.|++.+.+-++..+...+..+.+-|. -|-|.+-+|++++.+|.++.++.++ +
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~ 192 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYE 192 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhChHHhcCcchhh
Confidence 4445555667778999999999999999999999999999999996 8889999999999999999887631 0
Q ss_pred -------CCCC---------------------------ch---h-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchh
Q psy195 112 -------PLNI---------------------------PK---R-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQS 153 (691)
Q Consensus 112 -------~~~~---------------------------~~---~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~ 153 (691)
.-.+ .+ . .+++++.++.|+|.....+.-.+|+=| ...+
T Consensus 193 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDD----nvk~ 268 (735)
T KOG3626|consen 193 LEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDD----NVKK 268 (735)
T ss_pred hhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccc----cccc
Confidence 0000 00 1 467888899999999988888888888 4557
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC------------CCCchhHHHHHHHHHHHHHHHHHHhhcccc
Q psy195 154 AQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFG------------QEACFPLAFGVPALLMFLAIIVFIIGKPMY 219 (691)
Q Consensus 154 ~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g------------~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~ 219 (691)
++....+++.+....+|.++|.++++++.+..-++| +-..|+.+|++++.+.++..+.++...+..
T Consensus 269 ~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 269 KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 788899999999999999999999987654322331 123599999999988888777666654443
No 189
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.70 E-value=1.7e-06 Score=95.68 Aligned_cols=151 Identities=10% Similarity=0.115 Sum_probs=99.9
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh-cCCCCCchhH
Q psy195 42 TVLSLYMHLVLLYDEKTATVMFHIWT-GLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA-IDPLNIPKRT 119 (691)
Q Consensus 42 ~~l~~yl~~~lg~s~~~ag~i~~~~~-i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~-~~~~~~~~~~ 119 (691)
...+.++.+++|++..+.+.+..... ++..++.+++|+++||+ |||+.+.++.++..+..+.+.... .+.. .+
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~~~----~~ 304 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTPKH----LW 304 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcCCc----HH
Confidence 34455677779999999999886654 46889999999999997 999988777766555544332211 1100 03
Q ss_pred HHHHHH----HHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchh
Q psy195 120 FTLVGL----LLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFP 195 (691)
Q Consensus 120 ~l~i~~----~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~ 195 (691)
.+.++. +..+++.+...+....+..+.+| .+.+ +.+....++|..++..+++.+.+ ..||+
T Consensus 305 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~l~~~~~~~~~G~l~~-------~~G~~ 369 (402)
T PRK11902 305 TMALAIGIENLCGGMGTAAFVALLMALCNRSFS----ATQY----ALLSALASVGRVYVGPTSGYLVE-------AYGWP 369 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc----HHHH----HHHHHHHHHHHHHHHHHHHHHHH-------HhChH
Confidence 333333 34566677777777788888775 4433 33444446677666667888877 57799
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy195 196 LAFGVPALLMFLAIIVF 212 (691)
Q Consensus 196 ~~F~i~~~l~~l~~l~~ 212 (691)
..|.+.+++.++++++.
T Consensus 370 ~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 370 GFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888777666665443
No 190
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.70 E-value=1.3e-06 Score=92.97 Aligned_cols=161 Identities=11% Similarity=0.039 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
..|.+.+-.-..+..||.+..++|.++. +.|+|..++|..++...+......+..-++++|.-.+|+......+++.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 3566666677789999999999999997 479999999999999999999999999999998767888888888888888
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.+.+.+... ...+...+++|+|.|+..+....++.+..+ ++++-++..++.+-...+=+++||++.|++
T Consensus 288 ~~G~~~~P~--------~~~~lw~~llG~G~G~~F~laL~li~~rs~---~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 288 LVGLLLAPG--------QLPILWALLLGLGQGGAFPLALTLILLRSS---DAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHhhh--------hHHHHHHHHHhCccchHHHHHHHHHHhhcC---ChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 887766432 222233588999999999999999988654 566677777777766666677799999999
Q ss_pred hccccccCCCCchhHHHHH
Q psy195 182 RHDMQCFGQEACFPLAFGV 200 (691)
Q Consensus 182 ~~~~~~~g~~~~w~~~F~i 200 (691)
.+. ..+|+..+..
T Consensus 357 hDa------~gsw~~~~~~ 369 (395)
T COG2807 357 HDA------TGSWSAPLVL 369 (395)
T ss_pred HHh------cCChHHHHHH
Confidence 885 5678866554
No 191
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.69 E-value=6.3e-07 Score=100.01 Aligned_cols=156 Identities=17% Similarity=0.179 Sum_probs=126.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.+..+++..++...+........+.|.+..+|.+ ...+.+..+..++..++.++.++++||+ |+||++..+.++..+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 55667777777777777766677777777778877 5567777888999999999999999998 999999999999998
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCC---cchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIV---PEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~---~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
+.+++.+...++. +.+++..++.|++.|...+...++++|..+. .+.+++.|..++.+.+...+|..+++.+
T Consensus 303 ~~~~~~~~~~~~~-----~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 303 GFLLLFFLGPGSP-----WLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred HHHHHHHHHhhhH-----HHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 8887766531122 7788888999999999999999999998862 1223456899999999999999999998
Q ss_pred HHHhhc
Q psy195 178 TPIFRH 183 (691)
Q Consensus 178 ~~~l~~ 183 (691)
.+.+.+
T Consensus 378 ~g~~l~ 383 (428)
T PF13347_consen 378 VGLLLA 383 (428)
T ss_pred HHHHHH
Confidence 887654
No 192
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.68 E-value=7.2e-07 Score=98.75 Aligned_cols=132 Identities=8% Similarity=0.012 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhH-hcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCch
Q psy195 39 GMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIAD-TYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPK 117 (691)
Q Consensus 39 ~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaD-r~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~ 117 (691)
....++|.|+++..+ ++.+.+.+.+...++...+....+++.| |+ +.++.+..+.++..++.+++..... .
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~l~~~~~--~---- 297 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRF-RLEHRLMAGLLIMSLSMFPIGMVSN--L---- 297 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHHHhhh--H----
Confidence 344567888876555 6678888877777666555444455554 55 7677777777777777666554322 1
Q ss_pred hHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 118 RTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 118 ~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
..+.+..++.++|.+...|...++..+..| +++|++.++++....++|..+||.+.+++.+
T Consensus 298 -~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p----~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 298 -QQLFTLICLFYIGSIIAEPARETLSASLAD----ARARGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHccHHHHHHhcCC----cccchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 445566677888888888888999999776 8999999999999999999999999999876
No 193
>PRK10054 putative transporter; Provisional
Probab=98.66 E-value=5.9e-07 Score=99.24 Aligned_cols=164 Identities=13% Similarity=0.073 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHL--VLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~--~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
.++...+..++..+.+.....+++.|+.. +.+.+....+.+.....+......++.|++.||+ |+|+.+.++.++..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 44444444555444444444556666643 3456667778787777777777788999999997 99999998888777
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.+++..... +. +.+.++.++.++|.+...|...+++.+..| ++.|++.++... ...+|.++||.+++
T Consensus 286 ~~~~~~~~~~~-~~-----~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p----~~~~~~~~~~~~-~~~~G~~~Gp~~~G 354 (395)
T PRK10054 286 IGLVGFIFSGN-SL-----LLWGMSAAVFTVGEIIYAPGEYMLIDHIAP----PGMKASYFSAQS-LGWLGAAINPLVSG 354 (395)
T ss_pred HHHHHHHHcch-HH-----HHHHHHHHHHHHHHHHHHhhHHHHHHHhCC----cccceehHhHHH-HHHHHHHHHHHHHH
Confidence 77766654311 11 456677888999998888888888888665 777888887644 55689999999999
Q ss_pred HhhccccccCCCCchhHHHHHHHHH
Q psy195 180 IFRHDMQCFGQEACFPLAFGVPALL 204 (691)
Q Consensus 180 ~l~~~~~~~g~~~~w~~~F~i~~~l 204 (691)
.+.+ ..+....|.+.++.
T Consensus 355 ~l~~-------~~g~~~~~~~~~~~ 372 (395)
T PRK10054 355 VILT-------TLPPWSLFVILALA 372 (395)
T ss_pred HHHH-------HcChhhHHHHHHHH
Confidence 9987 34555666554433
No 194
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.65 E-value=5.4e-07 Score=102.77 Aligned_cols=170 Identities=15% Similarity=0.075 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 32 CERFCYYGMRTVLSLYMHLVLLYDEKTATV------------MFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~------------i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
+..+.+|++..++|.+++ ++|++...++. ...+..++..++.+++++++||+ |||++++++.++..
T Consensus 299 ~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~~~ 376 (502)
T TIGR00887 299 LLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFFILT 376 (502)
T ss_pred HHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHHHHH
Confidence 345567777777777775 57876542221 12334445666888999999997 99999988877766
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 100 ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
++.+++........ ....+....+...++..+..+....+.+|.+| .+.|+++.++.+....+|++++|.+.+
T Consensus 377 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p----~~~R~~~~g~~~~~~~~~~~~~~~~~~ 449 (502)
T TIGR00887 377 VLFFVLGFAYNHLS---THGFLAIYVLAQFFANFGPNATTFIVPGEVFP----TRYRSTAHGISAASGKAGAIIGQFGFL 449 (502)
T ss_pred HHHHHHHHHHHhcc---hhHHHHHHHHHHHHHhcCCCchhhhhhhccCc----hhHHHHHHHHHHHHhhhHHHHHHHHhh
Confidence 66555544311000 00111111111222222234556677899998 899999999999999999999999998
Q ss_pred Hhhcccccc-C--CCCchhHHHHHHHHHHHHHHH
Q psy195 180 IFRHDMQCF-G--QEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 180 ~l~~~~~~~-g--~~~~w~~~F~i~~~l~~l~~l 210 (691)
++.+..+.. | ...++...|.+.++..+++.+
T Consensus 450 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 450 YLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred hhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 876520000 0 012344556665555554433
No 195
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.64 E-value=2.2e-07 Score=99.22 Aligned_cols=141 Identities=22% Similarity=0.349 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHH
Q psy195 26 IVINEFCERFCYYGMRTVLSLYMHLVLLYD-EKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVL 104 (691)
Q Consensus 26 l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s-~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~il 104 (691)
++...++..+.++....+++.|+.+.+|++ ..+++.+.+...++..++.++.|+++||+ |+++.+.+......++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 444444555566678888999988899999 89999999999999999999999999997 9988887777666665555
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q psy195 105 LTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIST 175 (691)
Q Consensus 105 l~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp 175 (691)
+...... ......++..++.|++.+...+...++..+.+| +++|++..+..+...++|+.+||
T Consensus 290 ~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 290 LLLLPFS----SSPVWLIIALFLIGFGFGIVFPILFSLIQELVP----PEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HCCSHHH----CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCH----TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHCC
Confidence 4433211 001455667788999999999999999999776 89999999999999999999987
No 196
>TIGR00898 2A0119 cation transport protein.
Probab=98.62 E-value=1e-06 Score=100.23 Aligned_cols=139 Identities=16% Similarity=0.046 Sum_probs=97.1
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q psy195 51 VLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAV 130 (691)
Q Consensus 51 ~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gi 130 (691)
.++.+..... ....+...++.+++++++||+ |||+.+.++.++..++.+++........ ....+..++.++
T Consensus 352 ~~~~~~~~~~---~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~ 422 (505)
T TIGR00898 352 NLGGNIYLDL---FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPVDLY-----FLRTALAVLGKF 422 (505)
T ss_pred ccCCChHHHH---HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCCCch-----HHHHHHHHHHHH
Confidence 3455543333 344566778889999999997 9999999988877777666554321100 333444555666
Q ss_pred HhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 131 GTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 131 g~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
+.+...+...++.+|.+| .+.|+.++++......+|++++|.+.+ +.+ .++...+.+.+++.+++.+
T Consensus 423 ~~~~~~~~~~~~~~e~~p----~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~--------~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 423 GITSAFQMVYLYTAELYP----TVVRNLGVGVCSTMARVGSIISPFLVY-LGE--------KWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHHHHhccccc----HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH--------HHHhhHHHHHHHHHHHHHH
Confidence 777777888899999888 889999999999999999999999888 433 2345556555555444443
Q ss_pred H
Q psy195 211 V 211 (691)
Q Consensus 211 ~ 211 (691)
+
T Consensus 490 ~ 490 (505)
T TIGR00898 490 L 490 (505)
T ss_pred H
Confidence 3
No 197
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.62 E-value=2.7e-06 Score=93.95 Aligned_cols=135 Identities=7% Similarity=-0.116 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy195 36 CYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNI 115 (691)
Q Consensus 36 ~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~ 115 (691)
........++.|+++.+|.++.++|.+.+...++..+++++.|++.||+ ++++.+..+..+ .++..++.....+
T Consensus 220 ~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~~~---- 293 (393)
T PRK11195 220 AGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQHSL---- 293 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHhHH----
Confidence 3334445567788888999999999999999999999999999999997 999888777533 2332222222111
Q ss_pred chhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhh-HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 116 PKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQ-LEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 116 ~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~-rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
+...+..++.|++.|...++..+...+.-| ++. +|+..+..++..++|..++..+.+.+..
T Consensus 294 ---~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~----~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~ 355 (393)
T PRK11195 294 ---LPAYPLLILIGALGGFFVVPMNALLQHRGH----VLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK 355 (393)
T ss_pred ---HHHHHHHHHHHHhhhhhhhhHHHHHHhhCc----ccccchhHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 445566778889988888777777766432 433 7999999999999999999998886643
No 198
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.61 E-value=3.9e-06 Score=92.08 Aligned_cols=69 Identities=4% Similarity=0.148 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHh
Q psy195 39 GMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVT 108 (691)
Q Consensus 39 ~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s 108 (691)
....+.+.|+.+++|++..+.+.+.....++..++.++.|++.||+ |||+.+.++.++..++.+++...
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444567778888999999999999999999999999999999997 99999999988887777766654
No 199
>PRK11043 putative transporter; Provisional
Probab=98.60 E-value=5.8e-06 Score=91.02 Aligned_cols=140 Identities=11% Similarity=0.048 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh--
Q psy195 32 CERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA-- 109 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~-- 109 (691)
+....++....++|.|++ +.|++..+.|.......++..++.++++++.||+ |+|+.+..+.++..++.+.+....
T Consensus 214 ~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLL 291 (401)
T ss_pred HHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455555666777775 5799999999988888888899999999999997 999987666555544433322211
Q ss_pred -cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 110 -IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 110 -~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
.+.. ....++..+.+++.+...+...+...+..| ++++++.++.......++.+++.+.+.+.+
T Consensus 292 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 292 SHPSL-----VPLLIPFCVMAAANGAIYPIVVAQALRPFP-----QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred ccCcH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-----ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 1111 344555667788888888888777777554 468999999888777777788888777654
No 200
>KOG2504|consensus
Probab=98.59 E-value=6.9e-07 Score=101.79 Aligned_cols=177 Identities=14% Similarity=0.153 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHH--HHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTI--VILSIVY 98 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i--~ig~il~ 98 (691)
+.++.+.+...+..++++.-..+++.|.. ..+++..+++.++++..+...++.++.|+++|+. ..++.. .++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 56667777777888888888888999987 7999999999999999999999999999999997 633333 3333333
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 99 LGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 99 ~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
.++.+..+... ++ ..+...-++.|++.|.+....+..+.|..+ .++...++++..+...++.++||.++
T Consensus 376 gl~~~~~p~~~--~~-----~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g----~~~l~~a~Gl~l~~~gi~~l~gpPia 444 (509)
T KOG2504|consen 376 GLARLFLPFAT--TY-----VGLIVFSILFGFCVGSFSSLTPVILVDLVG----LEKLSNAYGLLLLFQGIGALVGPPIA 444 (509)
T ss_pred HHHHHHHHHhc--cH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----hhhcchHHHHHHHHhHHHHHcCcccc
Confidence 33333333322 12 667777788899999998888889999776 88889999999999999999999999
Q ss_pred HHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhc
Q psy195 179 PIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGK 216 (691)
Q Consensus 179 ~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~ 216 (691)
+++.+. ..+|...|+.+++.++++..++++..
T Consensus 445 g~~~d~------tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 445 GLLYDI------TGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeeec------cCCeeeehhhcChHHHHHHHHHHHhH
Confidence 988774 34588899998888888876665554
No 201
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.57 E-value=6.3e-06 Score=89.64 Aligned_cols=147 Identities=10% Similarity=0.009 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHH
Q psy195 24 FFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNV 103 (691)
Q Consensus 24 ~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~i 103 (691)
+..++..++...+.+....+.+.++.+.+|+++.+++.+.....++..++.+++|+++||+ |||+++.++.++..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~ 275 (377)
T PRK11102 197 LGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGI 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 3333334444444555555667778888999999999999999999999999999999997 999999988776544333
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHH
Q psy195 104 LLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFS-INAGSLISTFITP 179 (691)
Q Consensus 104 ll~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~-~nlG~~igp~i~~ 179 (691)
.+........ ..+.+.++..+.+.+.+...+.......|.. ++.+++..+..... ..+|..+++.+++
T Consensus 276 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 276 WLVVSALLDL---GFWALVVGVAAFVGCVSMISSNAMAVILDEF-----PHMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHhh---hHHHHHHHHHHHHHHHHHhhHHHHHHHhccc-----cccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222111000 0033334444444455555555555555644 35677777775543 3455665555543
No 202
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.57 E-value=4.1e-06 Score=91.87 Aligned_cols=165 Identities=10% Similarity=-0.034 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchh---HHHH-HHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKF---LTIV-ILSI 96 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRk---k~i~-ig~i 96 (691)
+.+|.+.+..++....+|++..++|.|+++ .|++.. ++....+..+... +..++++||. .|| +... ...+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 556777778888889999999999999965 688865 5555545444444 4458888886 654 3222 2222
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 97 VYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 97 l~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
+..++..++.....+ ....+...+.+++.+...+...++.+|.+| ++.|+++.++.+...++|+.++|.
T Consensus 266 ~~a~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p----~~~rgt~~G~~~~~g~~~~~~~~~ 334 (368)
T TIGR00903 266 LIAAFFLALAFELNR-------LALFAFIGIAGLLMLPAYAIIMDWIGKFCD----KELHGKAAGAIGFTSRAISVALAL 334 (368)
T ss_pred HHHHHHHHHHHcccc-------HHHHHHHHHHHHhhhhhHHHHHHHHHHhcc----hhhcCcccchhhHHHHHHHHHHHH
Confidence 222222222222111 333444455666666666778889999888 899999999999999999999999
Q ss_pred HHHHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 177 ITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
+.+.+.. +....|.+.++..+++.+.
T Consensus 335 ~~~~~~~---------~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 335 AAMLFIS---------SAEAYFTFLAILITIAFAI 360 (368)
T ss_pred HHHHHhc---------CHHHHHHHHHHHHHHHHHH
Confidence 8886653 2344555555555554443
No 203
>KOG4686|consensus
Probab=98.54 E-value=6.8e-07 Score=91.60 Aligned_cols=132 Identities=18% Similarity=0.303 Sum_probs=109.0
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh-cCCCCCchhHHHH
Q psy195 44 LSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA-IDPLNIPKRTFTL 122 (691)
Q Consensus 44 l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~-~~~~~~~~~~~l~ 122 (691)
+-.+.+.+.+.+.++..++.+.+..-..+.++++|++.||..|-|..-++-+++..+|.+.++... .... +++.
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aF-----w~M~ 140 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAF-----WTML 140 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHH-----HHHH
Confidence 566677777788888889999999999999999999999987887766666666678887776542 1111 8899
Q ss_pred HHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy195 123 VGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHD 184 (691)
Q Consensus 123 i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~ 184 (691)
.+|++.|+|.-......+.+..-+|. .++.+..++++.....+|+.+-.++.+++.+.
T Consensus 141 ~GRF~FGIGgESlAVaQN~yav~wFK----GKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 141 AGRFLFGIGGESLAVAQNKYAVYWFK----GKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred hhheeeccCchhhhhhhcceeEEEec----CccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 99999999988888888999999997 78899999999999999999888888888764
No 204
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.50 E-value=3.6e-06 Score=95.36 Aligned_cols=159 Identities=8% Similarity=0.002 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++.+++..++...+.+....+.+.|.+ ...-+....+.+.....++..++.++.++++||+ |||+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~-y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFT-YVIGDADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEE-EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 56666666666666666555454443433 3333566667777777788899999999999998 999999988877666
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCC---cchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIV---PEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~---~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
+.+.+....... ....+.+++..++.+++.+...+...++++|..+. .+..++.|..++...+...+|..+|+.+
T Consensus 309 ~~~~~~~~~~~~--~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 309 SCGVLLLMGLAA--PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred HHHHHHHHhccC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 665544321100 00014556666778899999999999999998651 2334556778999999999999999999
Q ss_pred HHHhhc
Q psy195 178 TPIFRH 183 (691)
Q Consensus 178 ~~~l~~ 183 (691)
.+++.+
T Consensus 387 ~g~~l~ 392 (473)
T PRK10429 387 IGVVLG 392 (473)
T ss_pred HHHHHH
Confidence 888765
No 205
>PRK09669 putative symporter YagG; Provisional
Probab=98.45 E-value=6.8e-06 Score=92.18 Aligned_cols=156 Identities=12% Similarity=0.002 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++.+++..++...+.... ..+..|+.+..--++...+.+.....+...++.++.++++||+ |||+.+.++.++..+
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTR-GGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVI 306 (444)
T ss_pred chHHHHHHHHHHHHHHHHHH-hhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 34455544444443444322 2344444332222333444555566677888889999999997 999999988766554
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCC---cchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIV---PEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~---~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
+.+.+......+. +.+++..++.|++.+...+...++++|..+. .+..++.|..++.+.++..+|..+|+.+
T Consensus 307 ~~~~~~~~~~~~~-----~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i 381 (444)
T PRK09669 307 LSALIFFIPPSNV-----WLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAV 381 (444)
T ss_pred HHHHHHHhCcchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3332222111111 5567777889999999999999999997751 1123445778889999999999999999
Q ss_pred HHHhhc
Q psy195 178 TPIFRH 183 (691)
Q Consensus 178 ~~~l~~ 183 (691)
++.+.+
T Consensus 382 ~g~ll~ 387 (444)
T PRK09669 382 VGWILA 387 (444)
T ss_pred HHHHHH
Confidence 988765
No 206
>KOG2816|consensus
Probab=98.44 E-value=4.2e-05 Score=86.03 Aligned_cols=127 Identities=15% Similarity=0.181 Sum_probs=94.9
Q ss_pred HHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH--Hhhchhhhhhhhhh
Q psy195 67 TGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAV--GTGGIKPCVSSFGG 144 (691)
Q Consensus 67 ~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gi--g~G~~~~~~~~~~a 144 (691)
.+...+.+++-|.++|+| |||..+.+..+...+..+.+.+.. +.+++ +.++ +.+.......++++
T Consensus 72 ~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~~---------~~~~~---~~~l~g~~~~~~s~~~a~va 138 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQG---------YWFFL---LLGLSGGFSAIFSVGFAYVA 138 (463)
T ss_pred HHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHHH---------HHHhh---hcccccchhhhhhhhhhhee
Confidence 677888999999999998 999999999887777666555532 11222 3332 23345567778888
Q ss_pred ccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q psy195 145 DQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKP 217 (691)
Q Consensus 145 d~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~ 217 (691)
| .+..++|...+++.......+..++|.+++.+.+ ..+....|.++.+..+++.+......|
T Consensus 139 d----is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~-------~~~~a~~f~ia~~~~~~~~~y~~~~l~ 200 (463)
T KOG2816|consen 139 D----ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK-------FLGIALVFLIAAASGILSLLYMLLFLP 200 (463)
T ss_pred e----ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-------hcCchHHHHHHHHHHHHHHHHHhhccc
Confidence 8 5558899999999999899999999999999877 356778888888877777665554443
No 207
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.43 E-value=1.8e-06 Score=93.28 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
++.+.+..++....++++..+++.|+++.+|+++.+++.+.+...++..++.+++|+++||+ |||+.+..+..+..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 44444444454555667778899999999999999999999999999999999999999997 99998887776666655
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHH
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAG 170 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG 170 (691)
.++.....+.. ....+.+..++.+++.|...+...++.++.+| +++|...+......++|
T Consensus 306 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 306 FLVVLGLVSPL---SLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-----RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHhcCCCcc---hHHHHHHHHHHHHHHhccccchhhhcchhhch-----hhcccHHHHHHHhccCC
Confidence 55443211100 01444455556666667666777777777663 58899999887776665
No 208
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.41 E-value=1.5e-05 Score=88.76 Aligned_cols=166 Identities=10% Similarity=-0.070 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLV-LLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGG 101 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~-lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig 101 (691)
++...+..++...+..+..++++.|+.+. .+.+...++...+.+..+..++.+++|+++||+ ++||++.+..++..+.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 44444455554455557778899998653 255666666677777788899999999999997 9999988887777666
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 102 NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 102 ~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.++...... .......++.|+..+...|...+...+.++ ++.+ ...+...++ .+|+++.|.+.+++
T Consensus 313 ~ll~~~~~~--------~~~~~~l~~~glf~s~~fp~i~sl~~~~~g----~~~~-~~s~~l~~~-~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 313 CLGSIFAGG--------HVGLYCLTLCSAFMSLMFPTIYGIALKGLG----QDTK-YGAAGLVMA-IIGGGIVPPLQGFI 378 (410)
T ss_pred HHHHHHcCC--------hHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----hhhh-hhHHHHHHH-HhccchHHHHHHHH
Confidence 666555321 233566777888888888999999999775 3332 222323333 38999999999998
Q ss_pred hccccccCCCCchhHHHHHHHHH
Q psy195 182 RHDMQCFGQEACFPLAFGVPALL 204 (691)
Q Consensus 182 ~~~~~~~g~~~~w~~~F~i~~~l 204 (691)
.+..+... ..+.+..|.++...
T Consensus 379 ~d~~~~~~-~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 379 IDMKEIAA-APAVNTSFILPLLC 400 (410)
T ss_pred HHHhcccc-cCccchHHHHHHHH
Confidence 87210000 11466777765543
No 209
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.40 E-value=3.7e-05 Score=84.44 Aligned_cols=133 Identities=17% Similarity=0.145 Sum_probs=94.5
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH
Q psy195 41 RTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTF 120 (691)
Q Consensus 41 ~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~ 120 (691)
....+.|+++.+|++..+.+.+.....++..++.++.+++.||+ ||+... +.....++.+++........ ...+.
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~ 301 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFGV--MNVWT 301 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhcc--ccHHH
Confidence 34566788877999999999988888888888999999999997 743333 32222333222221111000 00045
Q ss_pred HHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 121 TLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 121 l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
+.++.++.++|.|...+...++..|.+| ++++...+......++|+.+++.+++.+..
T Consensus 302 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 302 LLVPAALFFFGAGMLFPLATSGAMEPFP-----YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-----ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 6677788899999988999998888664 467888999888889999999999887754
No 210
>KOG2532|consensus
Probab=98.39 E-value=7.2e-06 Score=92.44 Aligned_cols=182 Identities=15% Similarity=0.153 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCch------hHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGK------FLTIVIL 94 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGR------kk~i~ig 94 (691)
..+|.+++..++...+++.+..++|.|+.+.+|++..+.|+..++-.+...+..+++|.++|+...| ++-+.-+
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 5688899999999999999999999999999999999999999999999999999999999997331 1112212
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHH
Q psy195 95 SIVYLGGNVLLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLI 173 (691)
Q Consensus 95 ~il~~ig~ill~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~i 173 (691)
......+..+..++..+....... ..+.++..+.|+..+++.- ..+. ..++.-+.++++.+...++.+++
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~------~~~~---~apq~a~~l~g~~~~~~~~~~~~ 408 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYK------NHQD---IAPQHAGFVMGIINFVGALAGFI 408 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHh------hhhh---ccchHHHHHHHHHHHHHHHHHHH
Confidence 222222222222221211100000 1122222222222222211 1111 12567799999999999999999
Q ss_pred HHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 174 STFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 174 gp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
+|.+.+.+... ++ ...|+..|.+.+++++++.+++.+.
T Consensus 409 ~P~~vg~~~~~-~t---~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 409 APLLVGIIVTD-NT---REEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHheeeEeCC-CC---HHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999987641 11 3479999999998888887665443
No 211
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.35 E-value=4.8e-05 Score=84.42 Aligned_cols=182 Identities=15% Similarity=0.152 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHH
Q psy195 26 IVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLL 105 (691)
Q Consensus 26 l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill 105 (691)
.++..++...+.-....+.+.|+++.-|.+....+.+.++..+.-.+.-.+.+++-.|+ |.++++.++++.+++=..++
T Consensus 212 Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l~ 290 (400)
T PF03825_consen 212 FLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLLY 290 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHH
Confidence 33344444444445567788998764448888888888887888888889999999998 99999999988877766666
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhcc
Q psy195 106 TVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFS-INAGSLISTFITPIFRHD 184 (691)
Q Consensus 106 ~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~-~nlG~~igp~i~~~l~~~ 184 (691)
+....|... ......++-.+.|+..|....+...++.+..| ++.|+++-+++... ..+|.++|..++|++.+.
T Consensus 291 a~~~~~~~~--~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p----~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~ 364 (400)
T PF03825_consen 291 AYFSDPWPF--IVALQLLGQLLHGLTFGLFHAASVRYIDRIAP----PELRATAQGLYSALSFGLGGAIGSLIGGWLYDA 364 (400)
T ss_pred HHhcCCcHH--HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCC----ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 654222110 00112233456899999999999999999777 88899999988765 578999999999999874
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q psy195 185 MQCFGQEACFPLAFGVPALLMFLAIIVFIIG 215 (691)
Q Consensus 185 ~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~ 215 (691)
.+.-+ ...|...+.+++++.++..+++++.
T Consensus 365 ~g~~~-~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 365 FGARG-MFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred hcchh-hhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 21100 2335566667666666655555544
No 212
>KOG0253|consensus
Probab=98.26 E-value=1.7e-05 Score=84.51 Aligned_cols=148 Identities=14% Similarity=0.071 Sum_probs=101.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--C-----------------CCHHHHHHHHHHHHHHHHHhHHHHHH
Q psy195 19 YPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVL--L-----------------YDEKTATVMFHIWTGLCYFFPLFGGI 79 (691)
Q Consensus 19 ~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~l--g-----------------~s~~~ag~i~~~~~i~~~i~~l~~G~ 79 (691)
.+|.-+++..+-+.++++||++.-......+... | ++...--.=..+....-+-|.++.|+
T Consensus 324 lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ 403 (528)
T KOG0253|consen 324 LRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGV 403 (528)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHH
Confidence 3455566677778889999988655433333211 1 11111111233456677788999999
Q ss_pred HhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHH
Q psy195 80 IADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKF 159 (691)
Q Consensus 80 LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~ 159 (691)
+.||+ |||++|....+++.+..+++.....++... ..++.+|+.+..+ ..+.+.|..|.|| ..-|+.+
T Consensus 404 iverl-GRKkTMal~l~~f~iflfll~~c~~rn~~t---vllf~arafisg~----fqvaYvYtPEVyP----TavRatg 471 (528)
T KOG0253|consen 404 IVERL-GRKKTMALSLILFGIFLFLLTTCKTRNAYT---VLLFTARAFISGA----FQVAYVYTPEVYP----TAVRATG 471 (528)
T ss_pred HHHHh-cchhHHHHHHHHHHHHHHHHHHhcCcchhH---HHHHHHHHHHhch----heEEEEecCcccc----hhhhhcc
Confidence 99996 999999999888877766665542221110 5566777665433 4567888889998 8889999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy195 160 FSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 160 ~~~~~~~~nlG~~igp~i~ 178 (691)
.|.-..+..+|+++.|.++
T Consensus 472 vGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 472 VGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hhhhhhHHhhhhhhhhHHH
Confidence 9998888999999999988
No 213
>KOG3098|consensus
Probab=98.26 E-value=0.00078 Score=75.27 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhh
Q psy195 63 FHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSF 142 (691)
Q Consensus 63 ~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~ 142 (691)
.++......++.++++.+.|+. |.|+.+.+|+..+.+-.+.+...+. +.++++-.+.|+|.+..+.....+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~N~--------y~~yfssallG~Gaallw~GqG~y 126 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFPNS--------YYLYFSSALLGFGAALLWTGQGGY 126 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhcch--------HHHHHHHHHhhhhHHheeccccee
Confidence 4555566677888889999996 9999999998777665554444322 788999999999999999999999
Q ss_pred hhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 143 GGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 143 ~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
+++ ...++.+++..++.....+.+.++|..+..
T Consensus 127 lt~----~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 127 LTS----NSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred hhh----cCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 999 445888888888776666777766655433
No 214
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.25 E-value=0.00014 Score=75.28 Aligned_cols=133 Identities=14% Similarity=0.095 Sum_probs=98.1
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q psy195 42 TVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFT 121 (691)
Q Consensus 42 ~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l 121 (691)
+.....+++.+|+|.++...+...-.++..++ ++.|.+.|++ |.+.++.+|.+...+|..++.............+.+
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~ 99 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLM 99 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHH
Confidence 34556678899999999999999999999875 8889999998 999999999999999998887763211111111566
Q ss_pred HHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy195 122 LVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIF 181 (691)
Q Consensus 122 ~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l 181 (691)
.+..++.+.|.+.+.+..-.-..+.|| ++||.+.++.-....+++++-..+...+
T Consensus 100 ~~~~~l~~~s~~~~~ta~lvt~~~NFP-----~~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 100 CLFLFLGGNSSCWFNTASLVTCVRNFP-----RSRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred HHHHHHHcccHHHhhhHHHHHHHHhCc-----cccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 666666666666655555555567886 4789999998777777776654444433
No 215
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.23 E-value=1.4e-07 Score=108.09 Aligned_cols=181 Identities=13% Similarity=0.106 Sum_probs=2.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhc--CC
Q psy195 35 FCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAI--DP 112 (691)
Q Consensus 35 ~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~--~~ 112 (691)
....+.......-+.++++++.+++|++.+.+-++..+..++..+.++|. .|-|-+-+|.++..+|.++++++++ +.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 44445555555567788999999999999999999999999999999996 8888889999999999999887642 10
Q ss_pred C------------------C--------------C----c---h-h-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcc
Q psy195 113 L------------------N--------------I----P---K-R-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPE 151 (691)
Q Consensus 113 ~------------------~--------------~----~---~-~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~ 151 (691)
+ . . . . . ..++++.++.|+|.....+.-.+|+=| ..
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD----nv 170 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD----NV 170 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc----cc
Confidence 0 0 0 0 1 1 567888899999999999999999888 44
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC---------------CCCchhHHHHHHHHHHHHHHHHHHhhc
Q psy195 152 QSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFG---------------QEACFPLAFGVPALLMFLAIIVFIIGK 216 (691)
Q Consensus 152 ~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g---------------~~~~w~~~F~i~~~l~~l~~l~~~~~~ 216 (691)
+++..+...++.+....+|.++|..+++.+.+..-+++ +-..|+.+|.+.+++.++..+.++...
T Consensus 171 ~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FP 250 (539)
T PF03137_consen 171 SKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFP 250 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 58888899999999999999999888876543211111 113599999988887776666555544
Q ss_pred cccc
Q psy195 217 PMYK 220 (691)
Q Consensus 217 ~~~~ 220 (691)
|+.+
T Consensus 251 k~lp 254 (539)
T PF03137_consen 251 KKLP 254 (539)
T ss_dssp ----
T ss_pred ccCC
Confidence 4443
No 216
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.23 E-value=0.00065 Score=76.25 Aligned_cols=154 Identities=12% Similarity=0.100 Sum_probs=106.6
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhc--Cc--hhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q psy195 43 VLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTY--LG--KFLTIVILSIVYLGGNVLLTVTAIDPLNIPKR 118 (691)
Q Consensus 43 ~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~--lG--Rkk~i~ig~il~~ig~ill~~s~~~~~~~~~~ 118 (691)
-...|+++++|+++++.....+...+.- ...++.|.++|.+ .| ||+=++++.++..++.+.++.. +.... +.
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~--~~~~~-s~ 86 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL--PASES-SA 86 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc--ccccc-hh
Confidence 3455778899999999887666555544 4556888999995 23 5566677776665555554442 21100 11
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHH
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAF 198 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F 198 (691)
....+..++..+|....-...-++.+|.-. ..+.+ ++...++.+....+|++++..++|.+.+ ..+++..|
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~-~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~-------~~~~~~~f 157 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELAR-REPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLD-------SFGPQGVF 157 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhh-cCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhh-------cCCCeEEe
Confidence 445566677888888888888889998775 33333 8999999999999999999999988876 35567677
Q ss_pred HHHHHHHHHHH
Q psy195 199 GVPALLMFLAI 209 (691)
Q Consensus 199 ~i~~~l~~l~~ 209 (691)
.+.+++..+..
T Consensus 158 ~i~~~~~~l~~ 168 (433)
T PF03092_consen 158 LISAALPLLML 168 (433)
T ss_pred hHHHHHHHHHH
Confidence 77665544443
No 217
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.21 E-value=7.8e-05 Score=83.18 Aligned_cols=157 Identities=16% Similarity=0.163 Sum_probs=122.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.+..+++..++...++....+.+.-|.+..+|.++..+.........+..++.++...+++|+ |+|++..++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 4455555566666666655555566666667889999998888888888889899999999997 999999999999999
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCC---cchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIV---PEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~---~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
+.+++.+....+. .+.++..++.++|.+...+...++++|..+- .+..++-|..++.+.+..=+|.+++..+
T Consensus 315 ~~~~~~f~~~~~~-----~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 315 GYLLLYFTPAGSV-----VLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHHHHhhcCcch-----HHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 9988877642222 7778888999999999999999999997652 2334455778888888888888888877
Q ss_pred HHHhhc
Q psy195 178 TPIFRH 183 (691)
Q Consensus 178 ~~~l~~ 183 (691)
.+++..
T Consensus 390 ~g~~L~ 395 (467)
T COG2211 390 PGWILG 395 (467)
T ss_pred HHHHHH
Confidence 776654
No 218
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.20 E-value=0.0004 Score=74.37 Aligned_cols=88 Identities=10% Similarity=-0.002 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-cc----C----
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQ-CF----G---- 189 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~-~~----g---- 189 (691)
..++++.++.|.|.+...+..++++++.-+ ++++.+..++.+.+..+|..+||.+++.+..... +. +
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~----~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAANPYVSILGP----IETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHHHHHHHHCC----cchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 778899999999999999999999999665 7778999999999999999999999997663100 00 0
Q ss_pred CCCchhHHHHHHHHHHHHHHH
Q psy195 190 QEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 190 ~~~~w~~~F~i~~~l~~l~~l 210 (691)
....|+.+|++.+++..+..+
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 013588888865555444333
No 219
>PRK11462 putative transporter; Provisional
Probab=98.18 E-value=9.4e-05 Score=83.62 Aligned_cols=156 Identities=8% Similarity=-0.035 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
|.++.++...++...+..........|.+..+|. +...+.+...+.++..++.+++++++||+ |+|+++..+.++..+
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAV 305 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 4444444444444444433333333333333444 33445667778888899999999999997 999887765554433
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCC---cchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIV---PEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~---~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
+.+++.+.... ....+++..++.|++.+...+...++++|..+. .+..++-|..++...+...+|..+|+.+
T Consensus 306 ~~~~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i 380 (460)
T PRK11462 306 ISLAMFFVPMQ-----ASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGAL 380 (460)
T ss_pred HHHHHHHhchh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 33332221110 003344555667888777777777888886541 1113333555677778889999999998
Q ss_pred HHHhhc
Q psy195 178 TPIFRH 183 (691)
Q Consensus 178 ~~~l~~ 183 (691)
++.+.+
T Consensus 381 ~g~iL~ 386 (460)
T PRK11462 381 IGWMLA 386 (460)
T ss_pred HHHHHH
Confidence 887654
No 220
>KOG0569|consensus
Probab=98.17 E-value=9e-05 Score=83.34 Aligned_cols=160 Identities=11% Similarity=0.058 Sum_probs=102.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHH
Q psy195 19 YPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVY 98 (691)
Q Consensus 19 ~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~ 98 (691)
.++..+..+...++..+.--.........+-...|++..++.+++....+...+.++++.++.||+ |||+.++++..++
T Consensus 267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLM 345 (485)
T ss_pred hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHH
Confidence 445555555555554333222223334444456799999999999999999999999999999997 9999999999888
Q ss_pred HHHHHHHHHhh-cCCCCCchh-HHHHHHHHHHHHHhhc-hhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q psy195 99 LGGNVLLTVTA-IDPLNIPKR-TFTLVGLLLIAVGTGG-IKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIST 175 (691)
Q Consensus 99 ~ig~ill~~s~-~~~~~~~~~-~~l~i~~~l~gig~G~-~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp 175 (691)
.+..+++.... .......+. ...+++.++..++.+. .-|...-+.+|.|| ++.|..+.++......+..++-.
T Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~----~~~R~aa~s~~~~~~w~~~fiv~ 421 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFP----QSARSAAQSVATAVNWLSNFIVG 421 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCC----ccchHHHHHHHHHHHHHHHHHHH
Confidence 87777666542 110000011 1223444444444433 24666778899998 77788888877666665555544
Q ss_pred HHHHHhhc
Q psy195 176 FITPIFRH 183 (691)
Q Consensus 176 ~i~~~l~~ 183 (691)
..-+.+.+
T Consensus 422 ~~fp~l~~ 429 (485)
T KOG0569|consen 422 FAFPPLQN 429 (485)
T ss_pred HHHHHHHH
Confidence 44444544
No 221
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.17 E-value=0.00015 Score=79.06 Aligned_cols=172 Identities=16% Similarity=0.225 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhc-
Q psy195 32 CERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAI- 110 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~- 110 (691)
...+++++-=..+=+|--+.+|++..++..++..+..+..++..+.|++..|-+|++++..+|+.+..++..++..+..
T Consensus 219 l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~ 298 (403)
T PF03209_consen 219 LGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL 298 (403)
T ss_pred HHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344554444556677777899999999999999999999999999999886569999999999998888887776642
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-C
Q psy195 111 DPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCF-G 189 (691)
Q Consensus 111 ~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~-g 189 (691)
.+. +.+..+.+++|+|.|.+....-+...|... +++.|..++.+.....++..+|..+++.+.+....+ +
T Consensus 299 ~~~-----~~~~~~~~l~G~g~G~f~vgals~mM~lt~----~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~ 369 (403)
T PF03209_consen 299 GSP-----WLFRPGVFLLGLGNGLFTVGALSLMMDLTS----AGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFG 369 (403)
T ss_pred ccc-----hHHHHHHHHHHHhhhHHHHHHHHHHHhCCC----CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111 889999999999999999888888888554 778899999999998888888888888776532211 1
Q ss_pred --CCCchhHHHHHHHHHHHHHHHHH
Q psy195 190 --QEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 190 --~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
+..+|...|.+-++++++++.+.
T Consensus 370 ~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 370 NSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHH
Confidence 13457777777777666665544
No 222
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.14 E-value=9.5e-05 Score=83.96 Aligned_cols=179 Identities=10% Similarity=0.060 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH----HHHHHHHHHHHHHHhHHHHH----HHhHhcCchhHH--HHHHHH
Q psy195 27 VINEFCERFCYYGMRTVLSLYMHLVLLYDEKT----ATVMFHIWTGLCYFFPLFGG----IIADTYLGKFLT--IVILSI 96 (691)
Q Consensus 27 ~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~----ag~i~~~~~i~~~i~~l~~G----~LaDr~lGRkk~--i~ig~i 96 (691)
++...+....|.-..+.++.|..+..+.+... .+++.+.-.+...+..++.. ++.||-.+.+.. +.+|.+
T Consensus 278 ~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~ 357 (475)
T TIGR00924 278 FLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGML 357 (475)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 33333444555555666888877654443222 55666666666666665544 445541133333 367888
Q ss_pred HHHHHHHHHHHhh-cCCC-CCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q psy195 97 VYLGGNVLLTVTA-IDPL-NIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIS 174 (691)
Q Consensus 97 l~~ig~ill~~s~-~~~~-~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~ig 174 (691)
+..++.+.+++.. .... ...+.+.+.+..++.++|.....|...++.++..| ++.||+.++.+..+..+|..++
T Consensus 358 l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP----~~~~g~~~g~~~l~~~~g~~l~ 433 (475)
T TIGR00924 358 FCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAP----QRLMGQMLGMWFLAQAMGSLLG 433 (475)
T ss_pred HHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHH
Confidence 8877777766431 0000 00111778889999999999999999999999665 9999999999999999999998
Q ss_pred HHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhc
Q psy195 175 TFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGK 216 (691)
Q Consensus 175 p~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~ 216 (691)
+.+...... ..+|...|...++.+++..++++...
T Consensus 434 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 434 GYLATFGAV-------PQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHhc-------ccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 888776544 34566667666665555555544443
No 223
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.09 E-value=0.00026 Score=72.08 Aligned_cols=148 Identities=20% Similarity=0.253 Sum_probs=107.2
Q ss_pred HHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhH
Q psy195 42 TVLSLYMHLVLLYDE--KTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRT 119 (691)
Q Consensus 42 ~~l~~yl~~~lg~s~--~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~ 119 (691)
...+.+.. ..+.+. ...+.+.+.+.+...++.++.|.++||+ |||+.+..+.....++.++..+.... ...
T Consensus 23 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (338)
T COG0477 23 PALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPNV-----GLA 95 (338)
T ss_pred HHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCccc-----hHH
Confidence 33444443 445454 5788999999999999999999999998 99988888876645554444433210 117
Q ss_pred HHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhccccccCCCCchhHHH
Q psy195 120 FTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYF-SINAGSLISTFITPIFRHDMQCFGQEACFPLAF 198 (691)
Q Consensus 120 ~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~-~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F 198 (691)
.+.+.|++.|++.|...+...++++|.+| . ..+|+...+.... ...+|..+++.+++.+... . ..+|+..|
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~ 167 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLSEWFP-E--ATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-L----LWGWRAAF 167 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcC-c--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----hcchHHHH
Confidence 78888988999999999999999999987 2 1578888888888 5778888888777666541 1 35688866
Q ss_pred HHHHHH
Q psy195 199 GVPALL 204 (691)
Q Consensus 199 ~i~~~l 204 (691)
.+....
T Consensus 168 ~~~~~~ 173 (338)
T COG0477 168 LLAALL 173 (338)
T ss_pred HHHHHH
Confidence 554443
No 224
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.08 E-value=0.00017 Score=79.67 Aligned_cols=174 Identities=9% Similarity=0.068 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVL---LYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~l---g~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
|.+|.+.+........|+..-.-++.|.+..+ +.+....|.+.++..+.-.+.-.+..++-+|+ |.|+.++++.++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHH
Confidence 55665555444444455555455788887533 34456678888888888889999999999997 999999999888
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHH-HHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLF-YFSINAGSLISTF 176 (691)
Q Consensus 98 ~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~-~~~~nlG~~igp~ 176 (691)
..+=.++.+++..+ +.+.+...+.++-.+..-....-|+++.+| ++...+.+.+. +.+..+|..+.+.
T Consensus 299 ~~iRi~~~~~~~~~-------~~i~~~klLH~~e~~l~lva~fkYI~~~fd----~rlsAt~y~v~~~~~~~~~~~i~s~ 367 (412)
T PF01306_consen 299 MAIRIIGSGFATNP-------WVISLIKLLHALEFPLLLVAAFKYITAHFD----KRLSATLYLVGFQFAKQIGIIILSP 367 (412)
T ss_dssp HHHHHHHHHT--SH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----GGGHHHHHHHHHTTTHHHHHHHHHH
T ss_pred HHHHHHHHhhhcch-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----HhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77766666665443 788899999999999999999999999997 77667777764 5677889998999
Q ss_pred HHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 177 ITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
++|.+.+ +.|++..|++.+.+.+...++-.
T Consensus 368 ~~G~lyd-------~~G~~~tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 368 LAGYLYD-------RIGFQHTYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhhHh-------hcCcHHHHHHHHHHHHHHHHHhe
Confidence 9999988 57788888777766554444433
No 225
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.07 E-value=0.00029 Score=78.41 Aligned_cols=153 Identities=12% Similarity=-0.072 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLG 100 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~i 100 (691)
+.++...+..++....+++....+|.++++.+|++..+.++.......+..++..+.+.+.++. ++++.+..+..+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 3455555555555666666667788999988999999999988778888888777777766554 454554444444445
Q ss_pred HHHHHHHhh--cCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTA--IDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 101 g~ill~~s~--~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
|.+++.... .+.. ....+++.++.++|.+...|+.....-.+. ...+|+..+........+..+++.+.
T Consensus 297 g~~l~~~~~~~~~~~----~~~~~~~~~l~~~G~~~~~p~~~~~al~~~-----~~~~G~a~a~~~~~~~~~~~~~~~~~ 367 (413)
T PRK15403 297 GLALLIVGNLLWPHV----WLWSVLGTSLYAFGIGLIFPTLFRFTLFSN-----NLPKGTVSASLNMVILMVMAVSVEIG 367 (413)
T ss_pred HHHHHHHHHHHcccc----HHHHHHHHHHHHHHHHHHhHHHHHHHhccC-----CCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 544443321 1110 023567888889999988888775333322 22357777777777777778888888
Q ss_pred HHhhc
Q psy195 179 PIFRH 183 (691)
Q Consensus 179 ~~l~~ 183 (691)
+++..
T Consensus 368 g~~~~ 372 (413)
T PRK15403 368 RWLWF 372 (413)
T ss_pred HHHHH
Confidence 88765
No 226
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.96 E-value=0.00017 Score=82.13 Aligned_cols=143 Identities=9% Similarity=0.007 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHHHhHHHHHHHhHhcCchhH-------HHHHHHHHHHHHH
Q psy195 34 RFCYYGMRTVLSLYMHLVLLYDEK----TATVMFHIWTGLCYFFPLFGGIIADTYLGKFL-------TIVILSIVYLGGN 102 (691)
Q Consensus 34 ~~~~y~i~~~l~~yl~~~lg~s~~----~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk-------~i~ig~il~~ig~ 102 (691)
...+......++.|+++..+.+.. ..+.+.+...+...+..++.|++.||+ |||+ -+.+|.++..++.
T Consensus 282 ~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~~ 360 (489)
T PRK10207 282 YILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLGF 360 (489)
T ss_pred HHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHHH
Confidence 344445556678887753333211 123444455566767888889999997 9987 3777877777776
Q ss_pred HHHHHhh--cCCCCCch-hHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 103 VLLTVTA--IDPLNIPK-RTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 103 ill~~s~--~~~~~~~~-~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
+.++... ........ .+.+....++.|+|.++..|...++..+..| ++.++.+++.+++..++|..+|..++.
T Consensus 361 ~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP----~~~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 361 LTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVP----QHLMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred HHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCh----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443211 11011111 1556678888999999999999999999665 999999999999999999999888776
Q ss_pred Hh
Q psy195 180 IF 181 (691)
Q Consensus 180 ~l 181 (691)
..
T Consensus 437 ~~ 438 (489)
T PRK10207 437 FT 438 (489)
T ss_pred Hh
Confidence 44
No 227
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.95 E-value=0.0023 Score=69.97 Aligned_cols=129 Identities=17% Similarity=0.037 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhcCC---CH----HHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHH-HHHHHHHHHHHHHHHHhhcC
Q psy195 40 MRTVLSLYMHLVLLY---DE----KTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTI-VILSIVYLGGNVLLTVTAID 111 (691)
Q Consensus 40 i~~~l~~yl~~~lg~---s~----~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i-~ig~il~~ig~ill~~s~~~ 111 (691)
....+|+|+++..+- ++ +..+...++..+...+..|+-|.++|+. |+||-. .+..++-++.++++.....
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~- 111 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP- 111 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC-
Confidence 345688898876554 22 4456677788888888899999999998 866654 4444444555555554321
Q ss_pred CCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 112 PLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 112 ~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
- +. ....+..++..++..+......+++.|..+ +++.++..+.-+-...+|+.+..+++
T Consensus 112 -~---s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~----k~~~~riS~lg~~~gylgs~i~li~~ 171 (438)
T COG2270 112 -G---SYLLLLLLFLILASIGFEFSNVFYDSMLPRLTT----KDNMGRISGLGWALGYLGSVILLIFV 171 (438)
T ss_pred -C---chHHHHHHHHHHHHHhcchhheehhhHhhhhcC----ccccCcccccccccccccchHHHHHH
Confidence 0 11 445555666778888888899999999775 55556666666666777777666554
No 228
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.92 E-value=8.6e-05 Score=62.49 Aligned_cols=65 Identities=22% Similarity=0.284 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 31 FCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 31 ~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
++...+...+.++++.|+++ .|+|..+.|.+.++..+...+++++.|+++||+ ||+|.+..+..+
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 34445555778999999974 899999999999999999999999999999998 999988776544
No 229
>KOG3762|consensus
Probab=97.91 E-value=0.00028 Score=78.77 Aligned_cols=68 Identities=13% Similarity=0.168 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHH
Q psy195 35 FCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVL 104 (691)
Q Consensus 35 ~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~il 104 (691)
.++-.+.+.++.|.. ++|+++.+.|.++..-.+..+++.|+.|.+|||+ -++|.+++|..+..+...+
T Consensus 25 ~~~g~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 25 ARFGSLFPLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred ecccccchHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Confidence 344467788999986 5999999999999999999999999999999998 8777777777766554443
No 230
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.91 E-value=0.00068 Score=73.62 Aligned_cols=167 Identities=13% Similarity=0.093 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
+++-.+..++-.-+--.+..+++.|+.+..|+++.+++..++.+..+.++|..++-++-.|+ -..|.+.+.+++..+.+
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~ 316 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLL 316 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 44444445554334446778899999988999999999999999999999999999999997 88888877765444444
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 103 VLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 103 ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
+...+... ..-..+.++.|+..+...|++.+...+-.| +. .+..+..-.+..+|+++-|.+.|++.
T Consensus 317 ~~~~l~~g--------~v~~~~l~~ig~F~simfPTIfslal~~l~---~~---ts~~s~~l~maivGGAiiP~l~G~i~ 382 (422)
T COG0738 317 LAVALIGG--------VVALYALFLIGLFNSIMFPTIFSLALKNLG---EH---TSVGSGLLVMAIVGGAIIPPLQGVIA 382 (422)
T ss_pred HHHHHhcC--------hHHHHHHHHHHHHhHHHHHHHHHHHHhccC---cc---ccccceeeeeheecchHHHHHHHHHH
Confidence 43333322 344567778899999999999999998775 11 22233333456788999999999998
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 183 HDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 183 ~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
+ ..+-...+.+...++.+..++
T Consensus 383 d-------~~g~~~~~~~~pllc~lyV~~ 404 (422)
T COG0738 383 D-------MFGIQLTFLIVPLLCYLYVLF 404 (422)
T ss_pred H-------hhhhHHHHHHHHHHHHHHHHH
Confidence 7 344555544334444444433
No 231
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.85 E-value=0.00067 Score=77.60 Aligned_cols=143 Identities=8% Similarity=0.035 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHH--hcCCCHH------HHHHHHHHHHHHHHHhHHHH----HHHhHhcCchhHHHHHHHHHHH
Q psy195 32 CERFCYYGMRTVLSLYMHL--VLLYDEK------TATVMFHIWTGLCYFFPLFG----GIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 32 ~~~~~~y~i~~~l~~yl~~--~lg~s~~------~ag~i~~~~~i~~~i~~l~~----G~LaDr~lGRkk~i~ig~il~~ 99 (691)
+....||.+...++.++.. ..+.+.. ..+++.++-.+...++.++. +++.||+ +..+.+.+|.++..
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~ 361 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCS 361 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHH
Confidence 4455666666666666442 1111111 14445555555555665555 6666665 67788889999989
Q ss_pred HHHHHHHHhhc-CCCCCch-hHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLLTVTAI-DPLNIPK-RTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 100 ig~ill~~s~~-~~~~~~~-~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
++.+.+..... .+-.... .+.+.+..++.++|.++..|...+++.+..| ++.||+.++.++++..+|..++..+
T Consensus 362 l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP----~~~rg~~~g~~~l~~a~g~~~~g~~ 437 (500)
T PRK09584 362 GAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVP----QRLMGFIMGSWFLTTAGAALIAGYV 437 (500)
T ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888766532 1100001 1578889999999999999999999999666 9999999999888887777776665
Q ss_pred HH
Q psy195 178 TP 179 (691)
Q Consensus 178 ~~ 179 (691)
..
T Consensus 438 ~~ 439 (500)
T PRK09584 438 AN 439 (500)
T ss_pred HH
Confidence 54
No 232
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.70 E-value=0.0002 Score=81.16 Aligned_cols=131 Identities=11% Similarity=-0.051 Sum_probs=103.0
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh-cCCCCC--chhHHHHHHH
Q psy195 49 HLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA-IDPLNI--PKRTFTLVGL 125 (691)
Q Consensus 49 ~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~-~~~~~~--~~~~~l~i~~ 125 (691)
.+.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++..++.+...... ..+... +....+...-
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 356899999999999999999999999999999997 999999999888877765532110 000000 0013444556
Q ss_pred HHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy195 126 LLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHD 184 (691)
Q Consensus 126 ~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~ 184 (691)
++.+++.|....+...++++..| ++.+++.++++....++|..+++.+++.+.+.
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p----~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCP----SGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCC----CCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888999999666 88899999999999999999999999988763
No 233
>KOG3764|consensus
Probab=97.64 E-value=0.00011 Score=79.24 Aligned_cols=164 Identities=12% Similarity=0.045 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCc--hhHHHHHHHHHHHHHHHHHHHhhcCC
Q psy195 35 FCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLG--KFLTIVILSIVYLGGNVLLTVTAIDP 112 (691)
Q Consensus 35 ~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lG--Rkk~i~ig~il~~ig~ill~~s~~~~ 112 (691)
.+.-..-+.++++..+....+.-+.|....-..+...++..+.|.++||+ | |-.....+++ ++|..........+
T Consensus 284 ~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~--~~G~~~~~iP~~~~ 360 (464)
T KOG3764|consen 284 SSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLA--TVGVSSGPIPFATS 360 (464)
T ss_pred chHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHH--HHHHHhchhHhhhh
Confidence 33334557788888888886666888888888899999999999999998 9 4333333322 33433222221111
Q ss_pred CCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhh---hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC
Q psy195 113 LNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSA---QLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFG 189 (691)
Q Consensus 113 ~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~---~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g 189 (691)
+ ..+++-++..+++.+...+...+......+ ....+ ..|..+++...+..+|.++||.+++.+.+
T Consensus 361 ~-----~~L~vp~~~l~~~i~~~dasl~P~l~~lvd-~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~------ 428 (464)
T KOG3764|consen 361 I-----AQLWVPNFGLGFGIGLADASLIPTLGYLVD-PRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE------ 428 (464)
T ss_pred H-----HHHhhhhHHHHHHHHHHHHHHhhhhHHhcc-hhhccccceeeeHHHHHHHHHHHhhhccccccchhee------
Confidence 1 567777777788888777777776777665 44444 67899999999999999999999999887
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 190 QEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 190 ~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
..|+.|.-.+.++..++..-++..
T Consensus 429 -~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 429 -AIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred -ehhHHHHHHHHHHHHHHHHHHHHH
Confidence 577776666655554444443333
No 234
>KOG2533|consensus
Probab=97.59 E-value=0.0007 Score=76.92 Aligned_cols=165 Identities=15% Similarity=0.130 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHh----cCchhHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADT----YLGKFLTIVILSIV 97 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr----~lGRkk~i~ig~il 97 (691)
.+|...+..++.-...|++..++|.|+++..|++..+++.+...+.++..++.+++|+++|| . .+|..+.....+
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-ARRLLFIVFLCL 352 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHH
Confidence 46667777777778888889999999998677999999999999999999999999999999 5 666666555544
Q ss_pred HH-HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy195 98 YL-GGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 98 ~~-ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
+. +|.+.+.....+ .....+.+....+.+...++......+... +..++-...+.+..+.+.+++++|.
T Consensus 353 ~~~~g~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~---g~~k~~~~~~~~i~~~~s~~~~~~~ 422 (495)
T KOG2533|consen 353 YAIIGAISLLAAAVL-------PGAYGAFLIGPYGLIATAIIALSWTSANLA---GNTKALTTVSAIIDGTGSAGAISGQ 422 (495)
T ss_pred HHHHHHHHHHhhccc-------hHHhHHHHhcchhhHHHHHHHHhhcccccc---chHHhHHHHhhhhcchhHHHHhhhh
Confidence 43 343444433221 222222233333333444444444455332 3344444555544444444443333
Q ss_pred HHHHhhccccccCCCCchhHHHHHHHH
Q psy195 177 ITPIFRHDMQCFGQEACFPLAFGVPAL 203 (691)
Q Consensus 177 i~~~l~~~~~~~g~~~~w~~~F~i~~~ 203 (691)
+-..... + ...|...|++..+
T Consensus 423 ~~~~~~a-----p-~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 423 LFRSLDA-----P-RYGWGAVFYMLVA 443 (495)
T ss_pred hcccccC-----c-chhhhhHHHHHHH
Confidence 2211111 1 3457777744443
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.58 E-value=0.0021 Score=72.79 Aligned_cols=196 Identities=11% Similarity=0.057 Sum_probs=132.3
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHH------H----HHHHHHHHHHHHHHhHHHHHHHhH
Q psy195 14 SEQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLV-LLYDEK------T----ATVMFHIWTGLCYFFPLFGGIIAD 82 (691)
Q Consensus 14 ~~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~-lg~s~~------~----ag~i~~~~~i~~~i~~l~~G~LaD 82 (691)
+.+++.||.++.++.+.++.-++++.+..+.+.|..++ ++-++. + ..+....+.+.+.+.+++--++.+
T Consensus 251 ~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~ 330 (477)
T TIGR01301 251 GAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCR 330 (477)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33556789999999999999999998888888888753 443211 1 123334455555677778888999
Q ss_pred hcCch-hHHHHHHHHHHHHHHHHHHHhhc-CC-----------CCCc-h-hHHHHHHHHHHHHHhhchhhhhhhhhhccC
Q psy195 83 TYLGK-FLTIVILSIVYLGGNVLLTVTAI-DP-----------LNIP-K-RTFTLVGLLLIAVGTGGIKPCVSSFGGDQF 147 (691)
Q Consensus 83 r~lGR-kk~i~ig~il~~ig~ill~~s~~-~~-----------~~~~-~-~~~l~i~~~l~gig~G~~~~~~~~~~ad~f 147 (691)
++ |+ |++-.++.++..++++...+... ++ ..+. + .+..++...+.|+..+.....-.+++++..
T Consensus 331 ~~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~ 409 (477)
T TIGR01301 331 GW-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRS 409 (477)
T ss_pred Hh-ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHc
Confidence 97 95 56657776776776666553321 00 0000 1 145566677889999998888899999976
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q psy195 148 IVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKP 217 (691)
Q Consensus 148 p~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~ 217 (691)
+ ...++.|..+++++.++.+...+..+..+.+... +| .+-..++.+.++.++++.+..+...|
T Consensus 410 ~--~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~---~g--~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 410 S--NLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQL---FG--GGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred c--ccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH---cC--CCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 4 1235569999999999999999888777764432 22 12345777778777777766555444
No 236
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.50 E-value=0.17 Score=57.34 Aligned_cols=153 Identities=14% Similarity=0.098 Sum_probs=91.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----HHHHHHHHHHHHHHHHHh-HHHHHHHhHhcCchhHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYD-----EKTATVMFHIWTGLCYFF-PLFGGIIADTYLGKFLTIVI 93 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s-----~~~ag~i~~~~~i~~~i~-~l~~G~LaDr~lGRkk~i~i 93 (691)
.+.++...+..++..+.|+.+.+ +.+.+..+ .....++-....+.+.+. .++-+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 34555566666677777766555 45555553 334455555444444444 78899999997 99998887
Q ss_pred HHHHHHHHHHHHHHhhcCC---CCCc-----------h----------hHHHHHHHHHHHH-HhhchhhhhhhhhhccCC
Q psy195 94 LSIVYLGGNVLLTVTAIDP---LNIP-----------K----------RTFTLVGLLLIAV-GTGGIKPCVSSFGGDQFI 148 (691)
Q Consensus 94 g~il~~ig~ill~~s~~~~---~~~~-----------~----------~~~l~i~~~l~gi-g~G~~~~~~~~~~ad~fp 148 (691)
....+..-.+++++.-.|. .++. . .+...+.-+...+ |.-..+-.-.++..|.+.
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t 159 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITT 159 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6666555555544431111 1110 0 0111111111111 111122245678889776
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 149 VPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 149 ~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
.++-.|.++....+.|+|..+|+.+..++.
T Consensus 160 ----~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 160 ----IDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999998888765
No 237
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.46 E-value=0.12 Score=57.15 Aligned_cols=153 Identities=13% Similarity=0.128 Sum_probs=105.8
Q ss_pred HHHHHHHHHHh-cCCCHHHHH-HHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q psy195 41 RTVLSLYMHLV-LLYDEKTAT-VMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKR 118 (691)
Q Consensus 41 ~~~l~~yl~~~-lg~s~~~ag-~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~ 118 (691)
-+++..|+.+. .|++..+.. -+.-+..-......++...++|.. |.|++++++.+..++..+++..... +
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~s--v----- 94 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGTS--V----- 94 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHCc--H-----
Confidence 36689999887 899988775 455556666777888899999996 9999999998877777666655421 1
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHH
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAF 198 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F 198 (691)
..+-+.-+.-| ...++-.++-+-.+. ..++++-.++.++...+.-+|.++|..++-.+... + ..++....
T Consensus 95 ~~mq~~q~~yg----~~~a~evay~sYiys-~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~----~-~~sy~~L~ 164 (412)
T PF01770_consen 95 LAMQLMQFFYG----LATAAEVAYYSYIYS-VVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF----G-GVSYFQLN 164 (412)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHhee-ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----c-CCCHHHHH
Confidence 33444444444 444445555555555 55688888999998888888888888877766541 1 35677777
Q ss_pred HHHHHHHHHHHHH
Q psy195 199 GVPALLMFLAIIV 211 (691)
Q Consensus 199 ~i~~~l~~l~~l~ 211 (691)
++..+...+++++
T Consensus 165 ~isl~~~~~a~~~ 177 (412)
T PF01770_consen 165 YISLASVSLALLI 177 (412)
T ss_pred HHHHHHHHHHHHH
Confidence 7766655555544
No 238
>KOG3762|consensus
Probab=97.42 E-value=0.0011 Score=74.05 Aligned_cols=171 Identities=11% Similarity=-0.023 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHH
Q psy195 28 INEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTV 107 (691)
Q Consensus 28 ~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~ 107 (691)
+...+..++.-.+.+++--++ ++++-.+..-|.+...-..+-++.-++.+++-.++ |+-+++.+++....+=.+.+..
T Consensus 378 ~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~ 455 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSY 455 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHH
Confidence 333444455545555564454 45676666666555566667778888999999997 9999999998777666666655
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhcccc
Q psy195 108 TAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFS-INAGSLISTFITPIFRHDMQ 186 (691)
Q Consensus 108 s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~-~nlG~~igp~i~~~l~~~~~ 186 (691)
...| |+.+..-++.|+..+.++.++.+|+++..| ++.|..+-++.+.. -.+|-.+|.++++.+..
T Consensus 456 L~n~-------W~vLPieilqgit~aliWaa~~sY~s~vaP----p~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~--- 521 (618)
T KOG3762|consen 456 LQNP-------WMVLPIEILQGITHALIWAAIISYASHVAP----PGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE--- 521 (618)
T ss_pred hcCc-------hheeeHHHHHHHHHHHHHHHHHHHHHhhCC----CcchHHHHHHHHHHhcccCcchhhhhhhhhhe---
Confidence 4444 778888899999999999999999999666 77777777766554 36777788888887766
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHhhccc
Q psy195 187 CFGQEACFPLAFGVPALLMFLAIIVFIIGKPM 218 (691)
Q Consensus 187 ~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~ 218 (691)
..+-+..|.+.++.+++.++.+....+.
T Consensus 522 ----~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 522 ----RFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred ----eehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3556778888887777777766655543
No 239
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.39 E-value=0.006 Score=58.55 Aligned_cols=107 Identities=10% Similarity=0.070 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhh
Q psy195 63 FHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSF 142 (691)
Q Consensus 63 ~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~ 142 (691)
.++......++.++++.+.+++ |.|+++++|.+.+.+-...... |+. +.++.+-++.|+|.+..+++...+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~---~~~-----~~l~~~s~l~G~~~a~lW~aqg~y 113 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY---PNS-----YTLYPASALLGFGAALLWTAQGTY 113 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh---hhH-----HHHHHHHHHHhhhhHHhhHhhhHH
Confidence 3444555566667777888996 9999999998777654433332 211 778899999999999999999999
Q ss_pred hhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 143 GGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 143 ~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
+.+ .++++.+++..+++....+.+.++|..+...+.
T Consensus 114 lt~----~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 114 LTS----YSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHH----cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 445888899898887778888888877666543
No 240
>KOG4332|consensus
Probab=97.25 E-value=0.0026 Score=65.32 Aligned_cols=90 Identities=20% Similarity=0.256 Sum_probs=66.1
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHh-hcCCCCCchhHHHHHH
Q psy195 46 LYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVT-AIDPLNIPKRTFTLVG 124 (691)
Q Consensus 46 ~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s-~~~~~~~~~~~~l~i~ 124 (691)
.|+.+.+|+...+.|.+...-...+++...+.|-|+|+- |||+.-..-++.++ +..+. ..|.+ -.+.++
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYi----LsCiTKhSpqY-----kVLmVG 130 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYI----LSCITKHSPQY-----KVLMVG 130 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHH----HHHHhhcCCce-----EEEeeh
Confidence 455567899999999888887888888899999999996 99997655544444 33333 12322 567899
Q ss_pred HHHHHHHhhchhhhhhhh-hhc
Q psy195 125 LLLIAVGTGGIKPCVSSF-GGD 145 (691)
Q Consensus 125 ~~l~gig~G~~~~~~~~~-~ad 145 (691)
|++-|+.++.....--++ ++|
T Consensus 131 R~LGGiaTsLLFSaFEsWliaE 152 (454)
T KOG4332|consen 131 RVLGGIATSLLFSAFESWLIAE 152 (454)
T ss_pred hhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999877665554 344
No 241
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.18 E-value=0.0081 Score=69.54 Aligned_cols=163 Identities=10% Similarity=-0.013 Sum_probs=111.8
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHhHHHHHHHhHhcC
Q psy195 9 YMLSPSEQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDE---KTATVMFHIWTGLCYFFPLFGGIIADTYL 85 (691)
Q Consensus 9 ~~~~~~~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~---~~ag~i~~~~~i~~~i~~l~~G~LaDr~l 85 (691)
++...+-++ .+|.+...+++.++..+.||++..+.|......++-+. ..++++......+..++.++.|.+.-++
T Consensus 299 Pl~P~~Lf~-~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i- 376 (599)
T PF06609_consen 299 PLFPHRLFK-DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI- 376 (599)
T ss_pred CcCCHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-
Confidence 334444444 45778887788888888888887888877776665554 3567777788888889999999999886
Q ss_pred chhHHH-HHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHH
Q psy195 86 GKFLTI-VILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFY 164 (691)
Q Consensus 86 GRkk~i-~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~ 164 (691)
||-|-. +++.+++.++..+++.....+. ...+...++.|+|.|.... ++...-|+ ..+++..+.+.++..
T Consensus 377 r~~Kw~li~~~~~~ta~~Gama~~~~~n~-----~~~i~~~~l~g~giG~~~~--~~~~~~ql--~~p~~~ig~a~gL~~ 447 (599)
T PF06609_consen 377 RHIKWQLIFGSVLMTAFCGAMAAVRPDNK-----NAAIAFLVLAGFGIGGILV--PAIVIAQL--IVPDEDIGTATGLTG 447 (599)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHccCCCc-----chHHHHHHHHHHhHHHHHH--HHHHeeEe--eeCchHHHHHHHHHH
Confidence 876654 4666565555555444322221 3345666778888887544 33444455 455788999999998
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy195 165 FSINAGSLISTFITPIFR 182 (691)
Q Consensus 165 ~~~nlG~~igp~i~~~l~ 182 (691)
..-.+|+.+|..+..-+.
T Consensus 448 s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 448 SIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHHhhHHHHHHHHHHH
Confidence 889999998888765543
No 242
>PTZ00207 hypothetical protein; Provisional
Probab=97.16 E-value=0.0043 Score=71.94 Aligned_cols=180 Identities=12% Similarity=0.081 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCH-HH-HHHHHHHHHHHHHHhHHHHHHHhHhcCchhH--------
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVL-LYDE-KT-ATVMFHIWTGLCYFFPLFGGIIADTYLGKFL-------- 89 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~l-g~s~-~~-ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk-------- 89 (691)
.++|+++...+|..-+-..+..++.. +.+.+ |.+. .+ ....++++.+++++|.+.+|.++... -||+
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~~q-I~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~-~~~~~~~r~prt 430 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNARF-IYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS-QKRRAEDRVPIT 430 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecHHH-HHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH-Hhhccccccchh
Confidence 46888888777754443344444443 33456 7733 32 22378999999999999999998332 3333
Q ss_pred -HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHH
Q psy195 90 -TIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSIN 168 (691)
Q Consensus 90 -~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~n 168 (691)
.+.+..+ +.++.+++++. .|. ..++++-++.|++.|...+...+..+|.|. +.-|..++....+.-
T Consensus 431 ~~l~~~~~-~~~~~lll~~~-~p~------~~L~~~~~lvg~~~G~~~~~~~~i~selFg-----k~~g~~yN~~~~a~p 497 (591)
T PTZ00207 431 IALFIPSV-CIITMLTLFLT-LPK------AALPLPYFIAAFANGFMAATIALVTRTIFA-----KDPAKHYNFCFLGSV 497 (591)
T ss_pred HHHHHHHH-HHHHHHHHHHH-CCc------cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-----cchHHHhhHHhHHHH
Confidence 2233333 55566665554 331 468899999999999999999999999993 667888888777777
Q ss_pred HHHHHH-HHHHHHhhc-------cccccCCCCchhHHHHHHHHHHHHHHHHHHhhc
Q psy195 169 AGSLIS-TFITPIFRH-------DMQCFGQEACFPLAFGVPALLMFLAIIVFIIGK 216 (691)
Q Consensus 169 lG~~ig-p~i~~~l~~-------~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~ 216 (691)
+|+.+- -.+.|.+.+ ...|.| ..+++..|.+.+++.+++.+.-....
T Consensus 498 igs~~~n~~l~G~~Yd~ea~k~~~~~C~G-~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 498 LSAIFLNRLLYGEWYTQQADKLGQDVCTE-RVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCeeCC-ceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 777754 234444432 123556 67899999998888887776654444
No 243
>KOG0637|consensus
Probab=97.15 E-value=0.0098 Score=65.65 Aligned_cols=156 Identities=15% Similarity=0.164 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhc---CchhHHHHH-HHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTY---LGKFLTIVI-LSIV 97 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~---lGRkk~i~i-g~il 97 (691)
.+..+..+.+..-+++-.=.++++.|++ .+|.+....+.+-..-.+...+.+|+.|..+||. +||||-.++ +.+.
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 3333333444444554444566888875 6999999999999999999999999999999973 388776554 4555
Q ss_pred HHHHHHHHHHhh-c-----CCCCCc--hh--HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTA-I-----DPLNIP--KR--TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSI 167 (691)
Q Consensus 98 ~~ig~ill~~s~-~-----~~~~~~--~~--~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~ 167 (691)
..++..+...++ + +..... .+ ..++++..+.=++.-..+++.-++++|... +.++++| +.+++-..+
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~-~d~~~~~--Ans~f~~f~ 188 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLAR-GDAKKTR--ANSVFSFFM 188 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhcc-Chhhhhc--cchhHHHHH
Confidence 566666665552 1 111110 11 567777778888888888899999999876 3333333 889999999
Q ss_pred HHHHHHHHHHHHHh
Q psy195 168 NAGSLISTFITPIF 181 (691)
Q Consensus 168 nlG~~igp~i~~~l 181 (691)
.+|..+|..+++++
T Consensus 189 avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 189 AVGNVLGYALGSYL 202 (498)
T ss_pred Hhcceeeeeccccc
Confidence 99999998887654
No 244
>KOG0254|consensus
Probab=96.96 E-value=0.02 Score=65.58 Aligned_cols=141 Identities=13% Similarity=-0.013 Sum_probs=80.0
Q ss_pred CchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHH
Q psy195 19 YPKAVFFIVINEFC-ERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIV 97 (691)
Q Consensus 19 ~~r~~~~l~~~~~~-~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il 97 (691)
.+|.....+....+ ...++..+..+.+..++ ..|.+... .....+..+...++..+++++.||+ |||+.++.+.+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~-~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK-SAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHH-hcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 34444433333333 33444444444555543 45555332 4444556666677778889999997 999999999999
Q ss_pred HHHHHHHHHHhh-cCCCC---Cchh-HHHHHHHHH--HHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHH
Q psy195 98 YLGGNVLLTVTA-IDPLN---IPKR-TFTLVGLLL--IAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSI 167 (691)
Q Consensus 98 ~~ig~ill~~s~-~~~~~---~~~~-~~l~i~~~l--~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~ 167 (691)
+.++.++++... ..... .... ...+++..+ ..+..|. .+....+.+|.|| .+.|+.+.++-....
T Consensus 369 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~-g~v~w~~~sEifp----~~~r~~~~s~~~~~n 440 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGW-GPVPWVIVSEIFP----LRLRSKGASLAVAVN 440 (513)
T ss_pred HHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhccc-ccchhhhhhccCc----HhHHhhhHHHHHHHH
Confidence 999888877652 11110 1111 222222222 2222222 2333457799998 788888877644433
No 245
>KOG2615|consensus
Probab=96.96 E-value=0.0086 Score=64.70 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhH-HHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYM-HLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFL-TIVILSIVYLG 100 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl-~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk-~i~ig~il~~i 100 (691)
.+..+....+.....|....+...++ .+.+|+++.++|-+.+...+...+.++.-+...|+..|.-+ .+..++.++.-
T Consensus 262 ~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP 341 (451)
T KOG2615|consen 262 VLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVP 341 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHH
Confidence 34444333333333333334444444 45799999999999988888888888888888888733333 34444444444
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 101 GNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 101 g~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
..+++.....+ ..++++..+-.+..+...++...++....| +++||.+.|+......++-++||.++|.
T Consensus 342 ~~llls~~~~~-------~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~----~~qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615|consen 342 AFLLLSLARTP-------VVLYLGSTLKSFSTASVVTCLTSLVHKYGP----QSQRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred HHHHHhccccc-------hhhhHHHHHHHHHHHHhhHHHHHHHHhcCC----cccchHHHHHHHHHHHHHHHhhhhhhhe
Confidence 44444444444 778899999999999999999999999666 9999999999999999999999999987
Q ss_pred hhc
Q psy195 181 FRH 183 (691)
Q Consensus 181 l~~ 183 (691)
+..
T Consensus 411 i~~ 413 (451)
T KOG2615|consen 411 IFS 413 (451)
T ss_pred eEE
Confidence 654
No 246
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.75 E-value=8.5e-06 Score=91.14 Aligned_cols=133 Identities=14% Similarity=0.064 Sum_probs=81.2
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHH--HhhcCCCCCchhHHH
Q psy195 44 LSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLT--VTAIDPLNIPKRTFT 121 (691)
Q Consensus 44 l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~--~s~~~~~~~~~~~~l 121 (691)
...++.+..+.+.. -.......+...++.+++.++.||+ |||++++++.++..+..+.+. ....+..........
T Consensus 275 ~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (451)
T PF00083_consen 275 YSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILS 351 (451)
T ss_pred cccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 33344445566665 2223344455667778888999997 999999999887777666554 111110000001112
Q ss_pred HHHHHHHHHHhh-chhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 122 LVGLLLIAVGTG-GIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 122 ~i~~~l~gig~G-~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
++...+..++.+ +..+....+.+|.|| .+.|+++.++.+....+++++++.+.+.+.+
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfP----t~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~ 410 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFP----TKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN 410 (451)
T ss_pred ceeeeecccccccccccccccccccccc----ccccccccccccccccccccccccccccccc
Confidence 222222222222 233555578899998 8889999999888888888888887776655
No 247
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.45 E-value=0.014 Score=68.81 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHhHHHHHHHhHhcCc--hhHHHHHHHHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTG-LCYFFPLFGGIIADTYLG--KFLTIVILSIVY 98 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i-~~~i~~l~~G~LaDr~lG--Rkk~i~ig~il~ 98 (691)
.++...+..++...+++++..++|.|+++.+|+++.+++.+.+...+ +..++.+++|+++||+ + .|+.+.++.++.
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~~ 409 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICLS 409 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHHH
Confidence 45566677777888888999999999999999999999999988776 6689999999999997 7 456676666555
Q ss_pred HHHHHH
Q psy195 99 LGGNVL 104 (691)
Q Consensus 99 ~ig~il 104 (691)
+++.++
T Consensus 410 ~~~~~~ 415 (633)
T TIGR00805 410 TLSYLL 415 (633)
T ss_pred HHHHHH
Confidence 555433
No 248
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.44 E-value=0.021 Score=51.51 Aligned_cols=81 Identities=14% Similarity=0.069 Sum_probs=53.8
Q ss_pred HHHHHHHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchH-HHHHHHHHHHHHHHHHHHh
Q psy195 596 QYIIITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIVAEAKIFENQA-YEFLLFASLMVVDMGVFAL 674 (691)
Q Consensus 596 q~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~ 674 (691)
..++.+++.....+......-+..|++.|+.+++.......+|..+...+.....+..+| ..|++.+.+.++..+..++
T Consensus 57 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 57 ARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 344555555554455555555566999999999999999999998887777765544444 3456666666666555554
Q ss_pred hh
Q psy195 675 LA 676 (691)
Q Consensus 675 ~~ 676 (691)
+.
T Consensus 137 ~~ 138 (141)
T TIGR00880 137 LL 138 (141)
T ss_pred cC
Confidence 43
No 249
>PRK03612 spermidine synthase; Provisional
Probab=96.37 E-value=0.23 Score=57.11 Aligned_cols=152 Identities=12% Similarity=-0.007 Sum_probs=80.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHH
Q psy195 20 PKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYL 99 (691)
Q Consensus 20 ~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ 99 (691)
++....+++...+..++|-.++ .-.+...+|-+....+.+++++..+..+|+.++|+++++- -|+.. .+-..+.+
T Consensus 16 ~~~l~~~~f~sg~~~L~yEv~~---~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~-~~e~~i~l 90 (521)
T PRK03612 16 RALLLAAVFVCAACGLVYELLL---GTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFV-AVELLLAL 90 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHH-HHHHHHHH
Confidence 3333333333333344444333 3334444689999999999999999999999999887553 23322 11111111
Q ss_pred HHHHHH--HHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 100 GGNVLL--TVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 100 ig~ill--~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
++.+.. .....+.. ......++...++.++..|+..|....+..+.. .++-++..+..|....+|+++|.++
T Consensus 91 ~~~~~~~ll~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-----~~~~g~~~g~ly~~ntlGa~~G~l~ 164 (521)
T PRK03612 91 LGGLSALILYAAFAFQ-GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-----DQHLGHNVATVLAADYLGALVGGLA 164 (521)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccchhhhhhhhHhHHhHHHHHHHHH
Confidence 111111 00111100 000022233344556667776666555554411 1234556677777778888888887
Q ss_pred HHHhh
Q psy195 178 TPIFR 182 (691)
Q Consensus 178 ~~~l~ 182 (691)
.+++.
T Consensus 165 ~~~vL 169 (521)
T PRK03612 165 FPFLL 169 (521)
T ss_pred HHHHH
Confidence 77643
No 250
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.09 E-value=0.47 Score=54.16 Aligned_cols=143 Identities=12% Similarity=0.035 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCH----HHHHHHHHHHHHHHHHhHHHHHHHhHhcCchh-H------HHHHHHHHHHHHH
Q psy195 34 RFCYYGMRTVLSLYMHLVLLYDE----KTATVMFHIWTGLCYFFPLFGGIIADTYLGKF-L------TIVILSIVYLGGN 102 (691)
Q Consensus 34 ~~~~y~i~~~l~~yl~~~lg~s~----~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRk-k------~i~ig~il~~ig~ 102 (691)
...|.-..+.+..|..+..+.+- -.+++..++-.+...+.+|+.+++=.|. +|| | =+.+|+++..++.
T Consensus 281 w~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l-~~~~~~~s~~~Kfa~g~~~~g~~f 359 (493)
T PRK15462 281 WAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKES-VAGNRTVRIWGKFALGLGLMSAGF 359 (493)
T ss_pred HHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHH
Confidence 33444444556777665322111 1245555666666667777777775563 332 1 2567888888887
Q ss_pred HHHHHhhc-CCCCC-chhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHH-HHHHHHHHHHHH
Q psy195 103 VLLTVTAI-DPLNI-PKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSI-NAGSLISTFITP 179 (691)
Q Consensus 103 ill~~s~~-~~~~~-~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~-nlG~~igp~i~~ 179 (691)
+.+.++.. ..-.. .+...+++..++.++|.=+..|.-.+++++.-| ++.+|..++.+++.. .+|..++..+..
T Consensus 360 ~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP----~~~~g~~mg~w~l~~~~~~~~~~g~~~~ 435 (493)
T PRK15462 360 CILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEI----PGVTGVLTGIYMLLSGAIANYLAGVIAD 435 (493)
T ss_pred HHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77765431 11111 111557788888999999999999999999665 999999999986643 566666555554
Q ss_pred Hh
Q psy195 180 IF 181 (691)
Q Consensus 180 ~l 181 (691)
..
T Consensus 436 ~~ 437 (493)
T PRK15462 436 QT 437 (493)
T ss_pred Hh
Confidence 43
No 251
>KOG0255|consensus
Probab=96.06 E-value=0.51 Score=54.07 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=75.0
Q ss_pred HHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCC
Q psy195 69 LCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFI 148 (691)
Q Consensus 69 ~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp 148 (691)
....+....+.+-|++ |||.....+.++..++.+.......... . ....+...+...+.+........+.+|++|
T Consensus 362 ~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~el~p 436 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLPDDLG--G--WLHWILPLLGKFFIGSAFNLIFLYSAELIP 436 (521)
T ss_pred HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhhccch--h--HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4445556668999997 9999999999888888877776532110 0 123333344444455555566888899998
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 149 VPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 149 ~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
...|..+.+.......+|++++|.+.....
T Consensus 437 ----t~~r~~~~~~~~~~~~~~~i~ap~~~~~~~ 466 (521)
T KOG0255|consen 437 ----TVVRNTAVGAISAAARLGSILAPLFPLLLR 466 (521)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788999999999999999999998876543
No 252
>KOG2816|consensus
Probab=95.97 E-value=0.048 Score=61.68 Aligned_cols=127 Identities=13% Similarity=0.135 Sum_probs=103.4
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHH-HHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q psy195 43 VLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGG-IIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFT 121 (691)
Q Consensus 43 ~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G-~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l 121 (691)
.++.|+...++++..+.+...+...+...++.++.. .+.-.+ |-|+++.+|++...+.....+++..+ ++.
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l-~~~~~i~lGl~~~~~~~~~~af~~~~-------w~~ 334 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL-GEKRLISLGLLSEFLQLLLFAFATET-------WMM 334 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhHHHHHHHHHHHHHHHhccc-------hhh
Confidence 346677778999999999999999999999998888 666664 99999999999999999888887544 666
Q ss_pred HHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 122 LVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 122 ~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
+.+..+.++. +...|...++.+.+.. ++++|+.+++....-.+...++|++-+.+.
T Consensus 335 ~~~~v~~~~~-~~~~pa~~s~~s~~v~----~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 335 FAAGVVVALA-GIVFPAIRAFASILVS----PEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred hHHHHHHHhh-cchhHHHHhHHHhhcc----cccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 6666665544 4567888888888665 899999999999999998888888766553
No 253
>KOG2563|consensus
Probab=95.89 E-value=0.036 Score=61.31 Aligned_cols=150 Identities=22% Similarity=0.150 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhH-HHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFL-TIVILSIVYLGG 101 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk-~i~ig~il~~ig 101 (691)
+.++++...+....|++....+-.-+ ..-|++...+|.+.....++++++++++|.++||. ...| ++++......++
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVG 345 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHH
Confidence 44444444444555555544433222 24588888999999999999999999999999998 5544 455555555555
Q ss_pred -HHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhcc-CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 102 -NVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQ-FIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 102 -~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~-fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
+.+......+.. .+.++....+.|....+..|.-..+..|. || ..+ +...|...+..++-+.+=.++.+
T Consensus 346 ~~~l~~~t~~~~~----~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyP----v~E-~tSsGll~~~gq~f~~~~~~~~~ 416 (480)
T KOG2563|consen 346 TLMLLTCTLFLGD----SVIVFTTCGLLGFFGTGYLPIGFELGVETTYP----VAE-GTSSGLLNLSGQIFGVILVFIMG 416 (480)
T ss_pred HHHHHHhhccCCc----eEehhhhHHHHHHhhcCCCCcceeeeeeeccc----cCC-cccceeEEeehhHHHHHHHHHHH
Confidence 333333222211 04455555566666666666666666664 33 222 33344444444443333344444
Q ss_pred Hhhc
Q psy195 180 IFRH 183 (691)
Q Consensus 180 ~l~~ 183 (691)
...+
T Consensus 417 ~~~~ 420 (480)
T KOG2563|consen 417 ILAE 420 (480)
T ss_pred HHhh
Confidence 4443
No 254
>KOG0252|consensus
Probab=95.86 E-value=0.022 Score=62.99 Aligned_cols=132 Identities=11% Similarity=0.026 Sum_probs=87.2
Q ss_pred hHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcc
Q psy195 73 FPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPE 151 (691)
Q Consensus 73 ~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~ 151 (691)
+..++..+.|++ |||+..+.|.+++.+..+.++.+........+. ....+..++..+|=+ ++.-.+-+|.||
T Consensus 364 Gyw~tv~~id~i-GRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FP--- 436 (538)
T KOG0252|consen 364 GYWFTVYFIDII-GRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFP--- 436 (538)
T ss_pred ceeEEEEEeehh-hhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhch---
Confidence 556777889996 999999999988888777666542210111111 223333333334433 334445569887
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q psy195 152 QSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFII 214 (691)
Q Consensus 152 ~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~ 214 (691)
.+-|+...++.-.+.-.|+.+|.....++.+. . +....+.+..|++.++.++++.+..++
T Consensus 437 -arvR~t~hGIsAA~GK~GAivg~~~F~~~t~~-~-yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 437 -ARVRSTCHGISAASGKAGAIVGAFGFLYLTDH-N-YPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred -HHHhhhhhhHHHHhccchHHHHHHHhhHhhhc-c-CCccccchHHHHHHHHHHHHhHheeEE
Confidence 99999999998888889999988877777652 1 222356778888888777777665443
No 255
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.38 E-value=0.19 Score=43.06 Aligned_cols=67 Identities=7% Similarity=-0.135 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh
Q psy195 41 RTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA 109 (691)
Q Consensus 41 ~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~ 109 (691)
.+.+| .+.++.++|.+++|++.+.-.+++.++.+...++.++. .+++.+..+.++..+.++.+++..
T Consensus 12 TplLP-~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 12 TPLLP-LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34454 45678999999999999999999999999999999996 888889999888888887777653
No 256
>KOG1330|consensus
Probab=94.36 E-value=0.071 Score=59.20 Aligned_cols=87 Identities=16% Similarity=0.032 Sum_probs=56.8
Q ss_pred HhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHhhhhhcCCch-HH-HHHHHHHHHHHHHHHHHhhhccce
Q psy195 603 AEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIVAEAKIFENQ-AY-EFLLFASLMVVDMGVFALLAMRYK 680 (691)
Q Consensus 603 ~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v~~~~~~~~~-~~-~~~~~a~~~~~~~~~~~~~~~~~~ 680 (691)
+|...++-...+.-...|...||++.++++++.-+|..++-++....-.-.. |. -|..-++++++..++..++.++-.
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 3444444444444444499999999999999988888765444333222222 32 467888888888888888887776
Q ss_pred ecCCCcccc
Q psy195 681 YVEEDEDED 689 (691)
Q Consensus 681 ~~~~~~~~~ 689 (691)
+...||.+.
T Consensus 214 rga~~~~~~ 222 (493)
T KOG1330|consen 214 RGARDEVDG 222 (493)
T ss_pred ccccccccc
Confidence 555555554
No 257
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.15 E-value=13 Score=42.44 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=63.6
Q ss_pred HHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCC---CCCch---------------------hHHHHHH
Q psy195 69 LCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDP---LNIPK---------------------RTFTLVG 124 (691)
Q Consensus 69 ~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~---~~~~~---------------------~~~l~i~ 124 (691)
++.+...+-.++++++ +|.++..+....+..-..++++.-.|. ++++. .|.+.+.
T Consensus 71 ~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slf 149 (491)
T PF03219_consen 71 VAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLF 149 (491)
T ss_pred HHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 4556677889999997 999988766555544444443321221 11110 0111111
Q ss_pred HHHHH-HHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 125 LLLIA-VGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 125 ~~l~g-ig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
-++.- .|.-...-.-..+..|.+. .++-.+.++.+..+.|+|.+++..+..++.+
T Consensus 150 Yv~aElwgsvvlSlLFW~fAN~itt----~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 150 YVMAELWGSVVLSLLFWGFANEITT----VEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 1111111123556677555 8888999999999999999998887776654
No 258
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.42 E-value=15 Score=40.74 Aligned_cols=123 Identities=11% Similarity=0.068 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhh
Q psy195 60 TVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCV 139 (691)
Q Consensus 60 g~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~ 139 (691)
+.+..+-.+-+.+..+++-++.+|+ .-+.=+.+..++..+|+++.+++ ++. +.-+++..+.+++.|.-....
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~--~~v-----~~~l~Gv~las~ssg~GE~tf 133 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFS--PSV-----WVRLLGVVLASLSSGLGEVTF 133 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeec--cch-----hHHHHHHHHHhhhhhhhHHHH
Confidence 4455555566677777888888886 53333444555667777776664 222 666788899999998877776
Q ss_pred hhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHH
Q psy195 140 SSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLM 205 (691)
Q Consensus 140 ~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~ 205 (691)
-++.+ .++ + ...+.+..+...++++|+..-..+... ..+.+..+.+...+-
T Consensus 134 L~lt~-~y~----~----~~l~~wssGTG~aGl~Ga~~y~~lT~~------g~s~~~tll~~~~lp 184 (402)
T PF02487_consen 134 LSLTH-FYG----K----SSLSAWSSGTGGAGLVGALYYLGLTTL------GLSPRTTLLIMLVLP 184 (402)
T ss_pred HHHHH-hcC----c----cccccccCCcChhhHHHHHHHHHHHHh------CcCHHHHHHHHHHHH
Confidence 66544 454 2 234555556666666666543333321 234455555555443
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.20 E-value=4.3 Score=45.62 Aligned_cols=133 Identities=11% Similarity=-0.029 Sum_probs=94.2
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhh-cCCCC-Cchh-
Q psy195 42 TVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTA-IDPLN-IPKR- 118 (691)
Q Consensus 42 ~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~-~~~~~-~~~~- 118 (691)
..+..|+..+ |+++...|..-+...+....+.++..++.+|+ |..|+=+++.....+...+...+- .+... ....
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 3477888765 99999999999999999999999999999997 999988888775544333322221 11110 0011
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPI 180 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~ 180 (691)
..++.+.++-=+|-=++--++.-++=|..| +++||...+......++--++...++-.
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~----~~~Rg~v~gvq~sl~~lf~ll~~~~~ii 414 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVP----ESERGAVSGVQNSLQSLFELLSFVLTII 414 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCC----HHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444555555446666666777777777665 8999999999988888888876665543
No 260
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=93.10 E-value=1.6 Score=49.55 Aligned_cols=68 Identities=7% Similarity=0.057 Sum_probs=53.4
Q ss_pred eehhhHHHHHHHHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchHHHHH
Q psy195 590 MLWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIVAEAKIFENQAYEFL 659 (691)
Q Consensus 590 ~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v~~~~~~~~~~~~~~ 659 (691)
+.++..--+++|++|.... ......++-.|++.|++++|.+.....+|.++...+.+. ...-+|..|.
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~ 182 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYS 182 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHH
Confidence 3444555677888999888 888888999999999999999999999999998777776 3333455443
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.01 E-value=0.028 Score=64.91 Aligned_cols=155 Identities=15% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHhHHHHHHHhHhc-CchhHHHHHHHHHHHHHH
Q psy195 25 FIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTG-LCYFFPLFGGIIADTY-LGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 25 ~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i-~~~i~~l~~G~LaDr~-lGRkk~i~ig~il~~ig~ 102 (691)
...+...++.+..-+..+++|.|++.+++.++++++.+.+...+ +..++.++||++..|+ ++.|+.+.+..+..+++.
T Consensus 309 ~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~ 388 (539)
T PF03137_consen 309 CLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSV 388 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 44455566677777888999999999999999999999877666 7778999999999997 345666665555544444
Q ss_pred HHHH---Hh---h-------cCC---------CC----------------Cc-----h---h-HHHHHHHHHHHHHhhch
Q psy195 103 VLLT---VT---A-------IDP---------LN----------------IP-----K---R-TFTLVGLLLIAVGTGGI 135 (691)
Q Consensus 103 ill~---~s---~-------~~~---------~~----------------~~-----~---~-~~l~i~~~l~gig~G~~ 135 (691)
++.. +. . .+. .+ .. . . ..+.+..++..+..+..
T Consensus 389 ~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~ 468 (539)
T PF03137_consen 389 ILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMS 468 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhc
Confidence 3311 10 0 010 00 00 0 1 23334444444444444
Q ss_pred hhhhhhhhhccCCCcchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhhc
Q psy195 136 KPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSI-NAGSLISTFITPIFRH 183 (691)
Q Consensus 136 ~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~-nlG~~igp~i~~~l~~ 183 (691)
........-+.++ +++|+.+.|+..+.. -+|.+-||++-|.+.+
T Consensus 469 ~~p~~~i~LR~V~----~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD 513 (539)
T PF03137_consen 469 QVPSTLITLRCVP----PEQRSFALGVQWLIIRLLGFIPGPIIFGAIID 513 (539)
T ss_dssp -------------------------------------------------
T ss_pred ccchheeeeccCC----hhhcchhhhHHHHHHHhhcCcchHHHHhHHHh
Confidence 4444444555454 888999999887766 5577888888887776
No 262
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=92.28 E-value=3.7 Score=46.43 Aligned_cols=134 Identities=13% Similarity=0.085 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhcCCC----HHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchh-------HHHHHHHHHHHHHHHHHHHhh
Q psy195 41 RTVLSLYMHLVLLYD----EKTATVMFHIWTGLCYFFPLFGGIIADTYLGKF-------LTIVILSIVYLGGNVLLTVTA 109 (691)
Q Consensus 41 ~~~l~~yl~~~lg~s----~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRk-------k~i~ig~il~~ig~ill~~s~ 109 (691)
.+.+..|..+..+-+ +-..++..+.-.+.-.+++++..++--+. ||+ .-+-+|..++..+.+++..+.
T Consensus 304 ~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~ 382 (498)
T COG3104 304 GSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAG 382 (498)
T ss_pred cchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 345666665432211 11223444444555556677777777663 443 234556666666666655541
Q ss_pred cCCC--CC-chhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 110 IDPL--NI-PKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 110 ~~~~--~~-~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
...- .. .+.+.++.+.+++++|.=+.+|.-.++....-| +.-.+..++.+.+....|..++..+.+
T Consensus 383 ~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP----~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 383 IWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAP----PALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhCh----HHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 1101 11 111778889999999999999999999999555 888999999999988888887766655
No 263
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.91 E-value=25 Score=39.50 Aligned_cols=179 Identities=9% Similarity=-0.007 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN 102 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ 102 (691)
.+.+...-++.+.+--+.-...+.|+.+-++-+-.-++..-..-.+...++.+..|...||. .|.+++..+.+..-++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 34444455555555444444466777665444444444444455666778888889999997 99999888766443332
Q ss_pred HH----HHHh-hcCCCCC--chh-HHHHHHHHHH-HHHhhchhhhhhhhhhccCCCcc--hhhhHHHHHHHHHHHHHHHH
Q psy195 103 VL----LTVT-AIDPLNI--PKR-TFTLVGLLLI-AVGTGGIKPCVSSFGGDQFIVPE--QSAQLEKFFSLFYFSINAGS 171 (691)
Q Consensus 103 il----l~~s-~~~~~~~--~~~-~~l~i~~~l~-gig~G~~~~~~~~~~ad~fp~~~--~~~~rg~~~~~~~~~~nlG~ 171 (691)
++ +... ..+.... ... ..+++...+. ++..=...+..-++--|+....+ ++..+.+.-....=.=-+--
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 22 2111 1111100 111 2222222222 22221222222333334443222 34444444444433334567
Q ss_pred HHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHH
Q psy195 172 LISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAI 209 (691)
Q Consensus 172 ~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~ 209 (691)
++||.+.+.+.. ..+...+..+.++..+++.
T Consensus 163 llaPl~vG~l~t-------~~s~~~~~~~i~~~N~~S~ 193 (432)
T PF06963_consen 163 LLAPLFVGLLMT-------FASPVIAAIFIAGWNLASV 193 (432)
T ss_pred HHHHHHHHHHhh-------ccCHHHHHHHHHHHHHHHH
Confidence 789999998876 3455555444444444443
No 264
>KOG3098|consensus
Probab=91.38 E-value=9 Score=43.30 Aligned_cols=106 Identities=20% Similarity=0.157 Sum_probs=70.1
Q ss_pred HHHHHHHHhHHHHHHHhH---hcCchhHHHHHHHHHHHHHHHHHHHhhcCC---CCC---------chhHHHHHHHHHHH
Q psy195 65 IWTGLCYFFPLFGGIIAD---TYLGKFLTIVILSIVYLGGNVLLTVTAIDP---LNI---------PKRTFTLVGLLLIA 129 (691)
Q Consensus 65 ~~~i~~~i~~l~~G~LaD---r~lGRkk~i~ig~il~~ig~ill~~s~~~~---~~~---------~~~~~l~i~~~l~g 129 (691)
....+..++..+.+.+++ ++ ||++++.++.++..++.++.-+. .|. +.+ +.+....+.-++.|
T Consensus 287 ~~g~g~v~~g~~~~~l~~rir~f-g~~~~~~~~~~~~~~~~~li~l~-~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 287 GIGLGEVIGGLDFSILSKRIRGF-GRKPTVLIGIIIHLIGFLLIHLS-FPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHhHHHHHHHHHHHHHhhhhhhc-ccCcchhHHHHHHHHHHHHHhcc-ccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 344555566666666664 45 89999999999888887776554 121 111 11234555667889
Q ss_pred HHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy195 130 VGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFI 177 (691)
Q Consensus 130 ig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i 177 (691)
++-++.......++++.+| ++|..+++++.+--.+++.++...
T Consensus 365 ~~D~~~~t~~~~ii~~~~~-----~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLYP-----DDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred hHHHHHHHHHHHHHHHHhc-----CchHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999874 555666666666556555544443
No 265
>KOG4332|consensus
Probab=90.14 E-value=2.9 Score=43.59 Aligned_cols=138 Identities=13% Similarity=0.159 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhHhcCchhH---HHHHHHHHHHHHHHHHHHhh--cCCCCCchhHHHHHHHHHHHHHhh
Q psy195 59 ATVMFHIWTGLCYFFPLFGGIIADTYLGKFL---TIVILSIVYLGGNVLLTVTA--IDPLNIPKRTFTLVGLLLIAVGTG 133 (691)
Q Consensus 59 ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk---~i~ig~il~~ig~ill~~s~--~~~~~~~~~~~l~i~~~l~gig~G 133 (691)
-|.+.+.|+.++++++-+...+..|- |.| .+.+..++......+..+.. .|+ ..+...-+++..+.-.+.|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~--kes~~~s~i~F~~~E~cvG 359 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALLLPILTSSVSPS--KESPSESLIGFCLFEACVG 359 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHHHHHHHhccCCC--cCCchHHHHHHHHHHHHHh
Confidence 37888888888888887777776663 322 33333333333322222221 222 1111445778888888999
Q ss_pred chhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHH
Q psy195 134 GIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIV 211 (691)
Q Consensus 134 ~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~ 211 (691)
.++|.+.-+=.+..| .+.|+..++++..-.|+-..++- ..+.. ..+ ..+-|..|.++.+.+.++.+.
T Consensus 360 lfwPSimkmRsqyIP----EearstimNfFRvPLnifvClvL---ynlh~--~~~--p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 360 LFWPSIMKMRSQYIP----EEARSTIMNFFRVPLNIFVCLVL---YNLHV--DAF--PTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred hcchHHHHHHHhhCC----HHHHhhhhhheechhhHhhhhhh---eeccc--ccC--ccccchhhhhhHHHHHHHHHH
Confidence 999999998888777 88899999999887775444221 11111 111 245678898888877766543
No 266
>KOG3626|consensus
Probab=89.11 E-value=1.5 Score=51.91 Aligned_cols=74 Identities=15% Similarity=0.194 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHhHHHHHHHhHhc-CchhHHHHHHHH
Q psy195 23 VFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTG-LCYFFPLFGGIIADTY-LGKFLTIVILSI 96 (691)
Q Consensus 23 ~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i-~~~i~~l~~G~LaDr~-lGRkk~i~ig~i 96 (691)
+...++...++..++-|..+++|.|+.+++|.+.+.|..+.+...+ +..+|.++||++.-|+ ++-|.+..+.++
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~ 469 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIV 469 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHH
Confidence 3355667778888888999999999999999999999999876655 5568889999999886 344555544433
No 267
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=87.10 E-value=61 Score=36.93 Aligned_cols=151 Identities=15% Similarity=0.158 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHH-HHHHhHHHHHHHhHhcCchhHHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYD---EKTATVMFHIWTG-LCYFFPLFGGIIADTYLGKFLTIVILSI 96 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s---~~~ag~i~~~~~i-~~~i~~l~~G~LaDr~lGRkk~i~ig~i 96 (691)
+.+..+.+..+|..+.|+.+.. +.+.+.++ +.....+-..... ++.+..++-+++.+++ -|.+++.+.+.
T Consensus 27 ~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~~~ 100 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHHHH
Confidence 3444555555555555543332 44445444 3333444444444 6778888999999997 99998876655
Q ss_pred HHHHHHHHHHHhhcCC---CCCc------------------------hh-HHHHHHHHHHHHHhhchhhhhhhhhhccCC
Q psy195 97 VYLGGNVLLTVTAIDP---LNIP------------------------KR-TFTLVGLLLIAVGTGGIKPCVSSFGGDQFI 148 (691)
Q Consensus 97 l~~ig~ill~~s~~~~---~~~~------------------------~~-~~l~i~~~l~gig~G~~~~~~~~~~ad~fp 148 (691)
.+..-.+++++.-.|. ++++ +. ..+++.-=+. |.=..+-.-..+.-|+..
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELW--gslV~S~lFw~faNeitt 178 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELW--GSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhh
Confidence 5544444444332221 0110 00 1111111111 111111122345556554
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 149 VPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 149 ~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
.++-.|+++.++.+.|++..++..+..++.+
T Consensus 179 ----~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 179 ----IEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred ----HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7888999999999999999999888887754
No 268
>KOG3574|consensus
Probab=85.99 E-value=33 Score=37.90 Aligned_cols=153 Identities=12% Similarity=0.123 Sum_probs=93.3
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhH-----hcCchhHH
Q psy195 16 QPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIAD-----TYLGKFLT 90 (691)
Q Consensus 16 ~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaD-----r~lGRkk~ 90 (691)
.++.++.+.++++..+....=+ |....+|..++ .-|.|-++.+....++ --+-.-++...+.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP~-GL~~~iP~lL~-ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPL-GLIGAIPLLLQ-AKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCch-hHhhhhHHHhc-CCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 5566677777777666654433 45455666665 5577777766433222 12233466777888 87 99998
Q ss_pred HHHHHHHHHHHHHHHHHhhc--CCCCCchh----HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHH
Q psy195 91 IVILSIVYLGGNVLLTVTAI--DPLNIPKR----TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFY 164 (691)
Q Consensus 91 i~ig~il~~ig~ill~~s~~--~~~~~~~~----~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~ 164 (691)
-++-+ -+.+|.+++.++.. ++...++. ..+....+++-+..+.--.++-.+.-.+.. +++.|-+...+.
T Consensus 101 Wvvp~-q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs----~e~lgyaST~q~ 175 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLS----RENLGYASTCQS 175 (510)
T ss_pred eeeeh-HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcC----HhhcCchhHHHH
Confidence 76543 34566666666531 22221111 223334455556666655566666666554 788888888888
Q ss_pred HHHHHHHHHHHHHH
Q psy195 165 FSINAGSLISTFIT 178 (691)
Q Consensus 165 ~~~nlG~~igp~i~ 178 (691)
.+.+.|.++|..+.
T Consensus 176 Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 176 VGQTAGYFLGNVVF 189 (510)
T ss_pred HHHhhhHHhhccee
Confidence 89999999887643
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=85.92 E-value=70 Score=36.49 Aligned_cols=144 Identities=13% Similarity=0.050 Sum_probs=84.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCch-----------h-----HHHHHHHHHHHHHHHHHHHhh-----cC
Q psy195 53 LYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGK-----------F-----LTIVILSIVYLGGNVLLTVTA-----ID 111 (691)
Q Consensus 53 g~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGR-----------k-----k~i~ig~il~~ig~ill~~s~-----~~ 111 (691)
-.+..|+.-....+.+++.++.+++|.+...+ .. . ..+.+..++..+.+.+..... .|
T Consensus 157 i~t~~qakRfy~l~~~ganlg~i~sg~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~ 235 (472)
T TIGR00769 157 ITTIDEAKRFYALFGLGANVALIFSGRTIKYF-SKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDP 235 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 46778888889999999999988888776664 31 1 122222222222222221110 11
Q ss_pred CCC----------C------------chhHHHHHHHH--HHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHH
Q psy195 112 PLN----------I------------PKRTFTLVGLL--LIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSI 167 (691)
Q Consensus 112 ~~~----------~------------~~~~~l~i~~~--l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~ 167 (691)
... + .+.....++.+ +.++............+.+++| ++++|+..++-+....
T Consensus 236 ~~~~~~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p---~~~~~~~f~g~~~~~~ 312 (472)
T TIGR00769 236 RSYNPALKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP---SPNEYSAFMGDFSTWT 312 (472)
T ss_pred cccchhhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHH
Confidence 100 0 01122222222 2345555566667777888887 5678899999988888
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHH
Q psy195 168 NAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFL 207 (691)
Q Consensus 168 nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l 207 (691)
++..++...+.+.+.+ ..||.....+..+++++
T Consensus 313 gi~tl~~~l~~~~l~~-------~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 313 GVVSVTMMLLSGNVIR-------KYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHH-------HhhHHHHHHHHHHHHHH
Confidence 8877655555566666 46798666665555544
No 270
>KOG3097|consensus
Probab=83.13 E-value=13 Score=40.17 Aligned_cols=112 Identities=13% Similarity=0.027 Sum_probs=63.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHH
Q psy195 19 YPKAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVY 98 (691)
Q Consensus 19 ~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~ 98 (691)
.-|.++.+-...+....+|-+. .++......++|. ...+. ........+++.+.+..++ |-|+++.++...+
T Consensus 27 ~~knv~i~s~~fl~~f~a~~gl-~nlq~~vn~~lg~--~sl~~----~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~~Y 98 (390)
T KOG3097|consen 27 ILKNVLILSIAFLLTFTAYLGL-QNLQTSVNYDLGT--VSLGA----LYLSLIDSSMFMPLLIRFL-GTKWTMVLAVFPY 98 (390)
T ss_pred hhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhcCccc--chhhh----hhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHH
Confidence 3456666665555544444444 4555554433332 22222 2223334445555777776 9999998876555
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhhhhhhhcc
Q psy195 99 LGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQ 146 (691)
Q Consensus 99 ~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~ 146 (691)
..-..... .|.+ ..++-+-.+.|+|.|..++.-.+++++.
T Consensus 99 ~lyiA~Nl---~pr~-----~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 99 ALYIAANL---EPRY-----ETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHHHHhhc---chhH-----HhhccHHHhhccccccccccCcceecHH
Confidence 44332222 2222 4566677788999998888777777663
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=82.46 E-value=17 Score=40.44 Aligned_cols=60 Identities=10% Similarity=-0.031 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy195 119 TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFR 182 (691)
Q Consensus 119 ~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~ 182 (691)
+..++..+..|+..|....+....+.+..+ +++|...++...++-++|..++.+++-.+.
T Consensus 336 ~ivf~lif~eGLlGGa~YVNtF~~I~~~~~----~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 336 WIVFVLIFYEGLLGGASYVNTFYRISEEVP----PEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 566667777899999999999999999665 889999999999999999988888776553
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.68 E-value=33 Score=38.66 Aligned_cols=116 Identities=11% Similarity=0.066 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhHhcCchh-HHHHHHHHHHHHHHHHHHHhh-cCCCCC----chhHHHHHHHHHHHHH
Q psy195 58 TATVMFHIWTGLCYFFPLFGGIIADTYLGKF-LTIVILSIVYLGGNVLLTVTA-IDPLNI----PKRTFTLVGLLLIAVG 131 (691)
Q Consensus 58 ~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRk-k~i~ig~il~~ig~ill~~s~-~~~~~~----~~~~~l~i~~~l~gig 131 (691)
-.-.+..+|.++-.+|..+..+.. .- ++| +.+.+..+.-++-.-++.+.+ .+.... +..+..++..++.|+.
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p-~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WP-DEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-ee-CCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 334566778888888887665431 11 222 133333333333222222222 110000 1116677778899999
Q ss_pred hhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 132 TGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 132 ~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
.|...+....+..+..+ +++|..+..+..++.++|.++|..++-
T Consensus 386 nGy~~s~~m~~~p~~v~----~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVD----PHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred hhHHHHHHHHhcCCCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888765 678888888888888888887776654
No 273
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=72.87 E-value=6.8 Score=40.68 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=57.7
Q ss_pred ehhhHHHHHH-HHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q psy195 591 LWLFPQYIII-TAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIVAEAKIFENQAYEFLLFASLMVVDM 669 (691)
Q Consensus 591 ~w~~pq~~~~-~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v~~~~~~~~~~~~~~~~a~~~~~~~ 669 (691)
.|++--+..+ +.+...+....+--..+.-|. .||.+.|+-....+++..|-..+......++...+.++.|....+..
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~ 174 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVC 174 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Confidence 4555544333 445555545444444556675 69999999999999999999988877766655555556666555555
Q ss_pred HHHHhhhccc
Q psy195 670 GVFALLAMRY 679 (691)
Q Consensus 670 ~~~~~~~~~~ 679 (691)
++..++.|..
T Consensus 175 l~~~~~vr~~ 184 (250)
T PF06813_consen 175 LVAMFFVRPV 184 (250)
T ss_pred HHHhhheecc
Confidence 5555555544
No 274
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=72.30 E-value=8.3 Score=42.10 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=70.0
Q ss_pred ceeeehhhHHHHHHHHHhHhhcchheeeecccCchh---hhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchHH-HHHHHH
Q psy195 587 KVSMLWLFPQYIIITAAEIMFSITGFEFAFTQAPVS---MKSAVSACWLLTTAFGNLIVAIVAEAKIFENQAY-EFLLFA 662 (691)
Q Consensus 587 ~~s~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~---mr~~~~a~~~~~~~~g~~i~~~v~~~~~~~~~~~-~~~~~a 662 (691)
..+...++.-.++++++...+=+....|.-+|-+++ .|...-..+.++..+|.++...+.+..-.+.+|. -|.+-+
T Consensus 30 ~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~ 109 (372)
T PF00854_consen 30 GIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPA 109 (372)
T ss_dssp ----CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHH
Confidence 345778888899999999999999888888877766 3444555667888899998877776665444554 567777
Q ss_pred HHHHHHHHHHHhhhccceec
Q psy195 663 SLMVVDMGVFALLAMRYKYV 682 (691)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~ 682 (691)
+.+++++++|+.-.++|+.+
T Consensus 110 ~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 110 IGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHCCCCTT--S
T ss_pred HHHHHHHHHHHhCCcCCcCc
Confidence 78888999998888889877
No 275
>KOG3810|consensus
Probab=72.26 E-value=1.3e+02 Score=33.07 Aligned_cols=129 Identities=9% Similarity=0.065 Sum_probs=71.8
Q ss_pred HHHHHHHH-HhcCCCHHHHH-HHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhH
Q psy195 42 TVLSLYMH-LVLLYDEKTAT-VMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRT 119 (691)
Q Consensus 42 ~~l~~yl~-~~lg~s~~~ag-~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~ 119 (691)
+++..|+. ...+++..+.. -+.-+..-...+.-++.=.+.|.. --|+++++-.+..++-..++.+... + .
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~l-rYKPvivlq~ls~v~~w~~lv~g~s--V-----~ 96 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYL-RYKPVVVLQALSGVPVWIMLVFGPS--V-----K 96 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhh-hcceeeeeeccchhHHHHHHHhcCC--c-----h
Confidence 34556655 33456655433 223333334445555555689997 4444444433322222232222211 1 1
Q ss_pred HHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 120 FTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 120 ~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
.+= ++-+..|...+.--++-+..+. ..+++++.+..+.-..+.-.|...|..++-.+.+
T Consensus 97 ~mQ----vlE~FyG~~tAaEIAYysYIYs-~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 97 AMQ----VLEFFYGPATAAEIAYYSYIYS-KVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred hee----eehhhcChHHHHHHhhhheeee-ecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh
Confidence 111 2223355556666666677766 6779999999999988888888888777766654
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=69.35 E-value=2.2e+02 Score=32.75 Aligned_cols=147 Identities=10% Similarity=0.162 Sum_probs=82.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCch-------------hHHHH-HHHHHHHHHHHHHHHh---h---c--
Q psy195 53 LYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGK-------------FLTIV-ILSIVYLGGNVLLTVT---A---I-- 110 (691)
Q Consensus 53 g~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGR-------------kk~i~-ig~il~~ig~ill~~s---~---~-- 110 (691)
-.+..|+.-....+.+++.++.+++|.+.-.+ .+ ...+. +..++.+.|.+.+... . .
T Consensus 172 itt~~eAKRfYpl~g~ganigli~sG~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~ 250 (491)
T PF03219_consen 172 ITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF-SSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTD 250 (491)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 46788999999999999999999999887775 55 00111 1111112222222111 1 1
Q ss_pred CCCCC----c------------------hhHHHHHHH--HHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHH
Q psy195 111 DPLNI----P------------------KRTFTLVGL--LLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFS 166 (691)
Q Consensus 111 ~~~~~----~------------------~~~~l~i~~--~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~ 166 (691)
+.... . +.....++. +..++............+.+++| +++++...+|-+...
T Consensus 251 ~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~---~~~~ysafmG~~~~~ 327 (491)
T PF03219_consen 251 PRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP---DPNDYSAFMGKFSSW 327 (491)
T ss_pred cccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CchHHHHHHHHHHHH
Confidence 11100 0 111222222 22345555566666777778887 456778888877776
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHH
Q psy195 167 INAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAII 210 (691)
Q Consensus 167 ~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l 210 (691)
.++-..+-..+++.+.+ ..||..+-.+..+++++..+
T Consensus 328 tGivtii~~~l~~~iir-------~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 328 TGIVTIIMMFLSSNIIR-------RFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHH-------HhhHHHHHHHhHHHHHHHHH
Confidence 66655555566666655 47898766665555444433
No 277
>KOG1479|consensus
Probab=66.55 E-value=2.2e+02 Score=31.79 Aligned_cols=57 Identities=12% Similarity=0.063 Sum_probs=39.4
Q ss_pred eehhhHHHHHHHHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHhh
Q psy195 590 MLWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIVA 646 (691)
Q Consensus 590 ~~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v~ 646 (691)
-+|.+.--.++|++-.....-.+-.+=++.|++.|..+-.+..+....|-..+..++
T Consensus 343 ~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 343 DGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred chHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 466666667777777777777777777778888888777777666666655555443
No 278
>KOG2325|consensus
Probab=64.52 E-value=10 Score=43.20 Aligned_cols=180 Identities=11% Similarity=0.097 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH----HHHHHHHhHHHHHHHh-HhcCchhHHHHHHH
Q psy195 21 KAVFFIVINEFCERFCYYGMRTVLSLYMHLVLLYDEKTATVMFHI----WTGLCYFFPLFGGIIA-DTYLGKFLTIVILS 95 (691)
Q Consensus 21 r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~lg~s~~~ag~i~~~----~~i~~~i~~l~~G~La-Dr~lGRkk~i~ig~ 95 (691)
+..+.+++..+...+.+..+-...+......++++.+++-...+. ..+......+..+... -++ .+|+.+..++
T Consensus 262 ~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i-~~r~~~~~g~ 340 (488)
T KOG2325|consen 262 VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKI-DKRRIILLGF 340 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhh-ccceeeeehH
Confidence 445555555555566655545555555555677777666544433 3333333333333333 222 4466666664
Q ss_pred HHHHHHHHHHHHh----hcC--CCC---Cc--------------hh-HHHHHH-HHHHHHHhhchhhhhhhhhhccCCCc
Q psy195 96 IVYLGGNVLLTVT----AID--PLN---IP--------------KR-TFTLVG-LLLIAVGTGGIKPCVSSFGGDQFIVP 150 (691)
Q Consensus 96 il~~ig~ill~~s----~~~--~~~---~~--------------~~-~~l~i~-~~l~gig~G~~~~~~~~~~ad~fp~~ 150 (691)
++......+.... ..| .+. .. .. +.++++ .++.|++.-.......++-+++..
T Consensus 341 l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLg-- 418 (488)
T KOG2325|consen 341 LIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILG-- 418 (488)
T ss_pred HHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhC--
Confidence 4433333322221 101 000 00 01 223333 334555555566677788888776
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHH
Q psy195 151 EQSAQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVF 212 (691)
Q Consensus 151 ~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~ 212 (691)
++..+..-+++.....++..+||.+...+.. ..|.++.+.+..+..++...++
T Consensus 419 --p~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~-------~~g~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 419 --PRDQGTMQGVFSISGSIARVVGPIFSTAIFT-------LSGPRPVWIILLCLLLVVAALW 471 (488)
T ss_pred --CccccceeEEEEeccchhhhhhHHHHhhhHH-------hcCccHHHHHHHHHHHHHHHHH
Confidence 7777888888888888888999888877655 3456655555555444444333
No 279
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=60.91 E-value=52 Score=36.89 Aligned_cols=124 Identities=12% Similarity=0.020 Sum_probs=73.5
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCC----CchhHHHHHHHHHHH
Q psy195 54 YDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLN----IPKRTFTLVGLLLIA 129 (691)
Q Consensus 54 ~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~----~~~~~~l~i~~~l~g 129 (691)
+++...+.+..+..++..++..+....--++ .-|+++.+..++..+..+.-... ...++ .+..+..+..-++..
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~-~~R~~~~~t~~~~~~~~l~~~~l-v~~~n~~~Gi~d~~f~lgd~~l~~ 329 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNW-SWRRIFVVTTLVSVLASLFDLLL-VTRWNLDLGIPDQWFALGDTILEE 329 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHhcccEEE-EEEEeeeeCcCCeEEEEEhHHHHH
Confidence 8888888877667777777766665444444 56777666654444332221111 00000 000111222223444
Q ss_pred HHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 130 VGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 130 ig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
+..+...-+...+.++.-| +..-|..+++.-...|+|..++..++..+.+
T Consensus 330 ~~~~i~~mP~lvl~a~lcP----~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~ 379 (433)
T PF03092_consen 330 VIGMIAFMPSLVLAARLCP----KGSEGTVYALLASFSNLGSSVSSTLGAFLME 379 (433)
T ss_pred HHHHHHHHHHHHHHHHHCC----CCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555556677888665 6667889999988899999999888887765
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=59.82 E-value=1e+02 Score=34.43 Aligned_cols=100 Identities=9% Similarity=0.039 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhc
Q psy195 55 DEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGG 134 (691)
Q Consensus 55 s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~ 134 (691)
...--|.+-.+..+.+.++.+..|++..++ .+..-+.++.+-.+.+.+++..+...+. +..+++-++.+...-.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm~~t~~I-----wv~Y~~yIif~~~y~f 356 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLMSFTGNI-----WVCYAGYIIFRSLYMF 356 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHH
Confidence 333457888888999999999999998777 7766666565544444444333322222 6667777776666666
Q ss_pred hhhhhhhhhhccCCCcchhhhHHHHHHHHH
Q psy195 135 IKPCVSSFGGDQFIVPEQSAQLEKFFSLFY 164 (691)
Q Consensus 135 ~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~ 164 (691)
..+....=+|.-.. .++.+-.||++.
T Consensus 357 liTiA~~qIA~~l~----~e~yaLVFGiNt 382 (412)
T PF01770_consen 357 LITIASFQIAKNLS----EERYALVFGINT 382 (412)
T ss_pred HHHHHHHHHHHhcc----ccceeeeeeeHH
Confidence 55555555555332 455566666543
No 281
>KOG1237|consensus
Probab=59.67 E-value=68 Score=37.49 Aligned_cols=77 Identities=23% Similarity=0.308 Sum_probs=43.1
Q ss_pred HHHHHHhcccchHHHHHHHhcC-cccCCceeecchhHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHH
Q psy195 287 IFWALFDQQGSRWTFQANRMDG-RVFGTSLEIKPDQMQLINPLLILTFIPLFQYVIYPLVDKCGLNRPLRKLTVGGLLAA 365 (691)
Q Consensus 287 ~~~~~~~q~~s~~~~~~~~~~~-~l~~G~~~i~~~~l~~in~i~iii~~pl~~~~l~p~l~R~~~~s~l~~i~iG~ll~~ 365 (691)
+.|..+.+....+..+...+.. .. .++.+..+.....+.+.++++.+....+.+ +...+. ++..++.++.+
T Consensus 196 FnW~yf~~~~g~l~a~t~~vyiq~~--~~w~lgf~i~~~~~~lai~iF~~g~~~y~~-----~~p~gs-p~t~i~~Vlva 267 (571)
T KOG1237|consen 196 FNWFYFSQNGGALLAQTVLVYIQDN--VGWKLGFGIPTVLNALAILIFLPGFPFYRY-----KKPRGS-PKTRIGQVLVA 267 (571)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhc--ccceeeccHHHHHHHHHHHHHHcCceeEEe-----eCCCCC-chhHHHHHHHH
Confidence 3455555555555555444322 23 466677888899999998888776654322 111111 44555666555
Q ss_pred HHHHHH
Q psy195 366 LSFVVS 371 (691)
Q Consensus 366 ~s~li~ 371 (691)
++.-.-
T Consensus 268 a~~k~~ 273 (571)
T KOG1237|consen 268 AAFKRK 273 (571)
T ss_pred HHHHHh
Confidence 554333
No 282
>KOG1479|consensus
Probab=52.43 E-value=48 Score=36.88 Aligned_cols=129 Identities=10% Similarity=0.135 Sum_probs=75.8
Q ss_pred HHHHHHHHhc--CC-CHHHHHHHHHH-HHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCC--Cc
Q psy195 43 VLSLYMHLVL--LY-DEKTATVMFHI-WTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLN--IP 116 (691)
Q Consensus 43 ~l~~yl~~~l--g~-s~~~ag~i~~~-~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~--~~ 116 (691)
.+|.+..+.. +. +.--+-.+... +.+...+|.+.+.++-+. +||+..... ++-.+-.-++.....+... ..
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v-~lR~lfiPlF~~cn~~~~~v~~~ 341 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPV-LLRLLFIPLFLLCNYPPLPVVFE 341 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHH-HHHHHHHHHHHHhccCCCCceec
Confidence 4566655432 12 33344455555 888888998888888776 555544433 2222222222211111100 01
Q ss_pred hhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 117 KRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 117 ~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
..+.+.+...++|+..|-...+...+..++.+ ++++..+-++..+....|.+.|..++
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~----~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVK----PSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCC----hHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 11777888889999999999999999999877 55555555555556666666555543
No 283
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=51.29 E-value=4.3e+02 Score=30.32 Aligned_cols=149 Identities=9% Similarity=0.081 Sum_probs=80.3
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHH---------HHHHH--HHHHHHHHHHHh---h-----cCCCC
Q psy195 54 YDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTI---------VILSI--VYLGGNVLLTVT---A-----IDPLN 114 (691)
Q Consensus 54 ~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i---------~ig~i--l~~ig~ill~~s---~-----~~~~~ 114 (691)
.+..|+.-....+.+++.++.+++|.+.-.+ ++++-. +.... +.+.+.+..... . .|...
T Consensus 177 tt~~eakRFy~lf~l~~ni~lllsg~~~~~~-~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~ 255 (509)
T COG3202 177 TTIEEAKRFYPLFGLGANISLLLSGEVTSWL-SKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFY 255 (509)
T ss_pred hhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH-hhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh
Confidence 3567888888999999999999998888776 652221 11111 111111111111 0 11110
Q ss_pred -C-------c---------------hhHHHHHH--HHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHH
Q psy195 115 -I-------P---------------KRTFTLVG--LLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINA 169 (691)
Q Consensus 115 -~-------~---------------~~~~l~i~--~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nl 169 (691)
. . +..+..++ .+..|++...+.+..-+=+.+.+| ...+++..++-++...++
T Consensus 256 ~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~---~~~~~~~f~~~~~~~tgv 332 (509)
T COG3202 256 LRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYP---TTNEYTAFMGRFQIWTGV 332 (509)
T ss_pred HHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcC---ChhHHHHHHHHHHHHHHH
Confidence 0 0 11122222 222345555566666666777776 233477777777666655
Q ss_pred H-HHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy195 170 G-SLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFI 213 (691)
Q Consensus 170 G-~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~ 213 (691)
- .++....++-+.. ..||-.+-.++.+++++..++++
T Consensus 333 v~~v~~~~~~s~~ir-------~~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 333 VSLVVFLFPGSNLIR-------RVGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHHHHhhhHHHHH-------HhhHHHHHHHHHHHHHHHHHHHH
Confidence 5 3333445555544 46788777777776666655544
No 284
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=50.58 E-value=3.8e+02 Score=29.52 Aligned_cols=128 Identities=15% Similarity=0.082 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHH----HHH-HHhhcCCC
Q psy195 39 GMRTVLSLYMHLVLLYDEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGN----VLL-TVTAIDPL 113 (691)
Q Consensus 39 ~i~~~l~~yl~~~lg~s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~----ill-~~s~~~~~ 113 (691)
-....+..|+ +|-+..+.+.+++.|.....+++.+.-++.|.- -.-+.+.+-.++-.+|- +++ .++..
T Consensus 28 lal~tLatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~FA~~--- 100 (508)
T COG4262 28 LALGTLATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLLFALE--- 100 (508)
T ss_pred HHHHHHHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHHHHhc---
Confidence 4445566676 477777888888888888888877776666542 22222222222222221 111 12111
Q ss_pred CCchhHHHHHHHHHHHHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q psy195 114 NIPKRTFTLVGLLLIAVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLIST 175 (691)
Q Consensus 114 ~~~~~~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp 175 (691)
..+.++.++++-.++|.-.|.-.|....++-.... .-+..-++....=|++.-.|+++-|
T Consensus 101 ~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~gLl~p 160 (508)
T COG4262 101 SAPSRLVLYALTAVIGVLVGAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGGLLWP 160 (508)
T ss_pred cchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHHHHHH
Confidence 11122777888888999899988887776655221 1122233444445555544444433
No 285
>KOG0637|consensus
Probab=47.51 E-value=56 Score=36.91 Aligned_cols=91 Identities=8% Similarity=0.010 Sum_probs=58.8
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-C----CHHHH-----------HHHHHHHHHHHHHhHHHH
Q psy195 15 EQPKYPKAVFFIVINEFCERFCYYGMRTVLSLYMHLV-LL-Y----DEKTA-----------TVMFHIWTGLCYFFPLFG 77 (691)
Q Consensus 15 ~~~~~~r~~~~l~~~~~~~~~~~y~i~~~l~~yl~~~-lg-~----s~~~a-----------g~i~~~~~i~~~i~~l~~ 77 (691)
.++..||.++.+++..++..++.+...-+...++-++ ++ - +.+++ .+=..+..+...+.++..
T Consensus 273 ~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~ 352 (498)
T KOG0637|consen 273 ALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLV 352 (498)
T ss_pred hHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence 3566889999999999999888876666666665543 11 1 11111 233456677778889999
Q ss_pred HHHhHhcCchhHHHHHHHHHHHHHHHHHH
Q psy195 78 GIIADTYLGKFLTIVILSIVYLGGNVLLT 106 (691)
Q Consensus 78 G~LaDr~lGRkk~i~ig~il~~ig~ill~ 106 (691)
-++.||+ |-|+..+.+...+.+++.+..
T Consensus 353 ~~l~~~~-g~r~~y~~~~~~f~~~~~~~g 380 (498)
T KOG0637|consen 353 EKLSRKF-GTRKRYWGGVNAFGLATGLAG 380 (498)
T ss_pred HHHHHhc-CcceEEeehhHHHHHHHHHHh
Confidence 9999998 855544444443445544443
No 286
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=46.02 E-value=93 Score=29.79 Aligned_cols=81 Identities=15% Similarity=0.226 Sum_probs=43.5
Q ss_pred HHhHhcCchhHHHHHHHHHHHHHHHHHHHhh----cCCCCCchh-----HHHHHHHHHHHHHhhchhhhhhhhhhccCCC
Q psy195 79 IIADTYLGKFLTIVILSIVYLGGNVLLTVTA----IDPLNIPKR-----TFTLVGLLLIAVGTGGIKPCVSSFGGDQFIV 149 (691)
Q Consensus 79 ~LaDr~lGRkk~i~ig~il~~ig~ill~~s~----~~~~~~~~~-----~~l~i~~~l~gig~G~~~~~~~~~~ad~fp~ 149 (691)
.++||. -| |+.+...+-.++|+..+.... ...+..+.. .+.+.+..++|+.+|..++ -.+
T Consensus 56 ~Vs~RM-~r-Rm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSa--------SWD- 124 (153)
T PF11947_consen 56 VVSNRM-LR-RMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSA--------SWD- 124 (153)
T ss_pred HHHHHH-HH-HHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhccc--------ccC-
Confidence 478997 44 444444455555555544431 111111111 2333444445555555433 222
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHH
Q psy195 150 PEQSAQLEKFFSLFYFSINAGSLI 173 (691)
Q Consensus 150 ~~~~~~rg~~~~~~~~~~nlG~~i 173 (691)
+++-|++.||-.+-.|++-+.
T Consensus 125 ---~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 125 ---PEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred ---CCCCCCcccHHHHHHhHHHHH
Confidence 566799999999999987764
No 287
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=45.32 E-value=67 Score=26.87 Aligned_cols=49 Identities=20% Similarity=0.356 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhccccc
Q psy195 162 LFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYK 220 (691)
Q Consensus 162 ~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~ 220 (691)
+.+....+++++|.+++....+ .+..+++.++..++++++.++..|.+.
T Consensus 12 l~~~il~~~~iisfi~Gy~~q~----------~~~~~~~~~~g~~~~~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 12 LMQYILIISAIISFIVGYITQS----------FSYTFYIYGAGVVLTLLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHhheeCCcHhhc
Confidence 3444566667766665544433 566777777667777666666655553
No 288
>KOG4112|consensus
Probab=42.83 E-value=62 Score=28.11 Aligned_cols=54 Identities=7% Similarity=0.102 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcccccc
Q psy195 158 KFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMYKI 221 (691)
Q Consensus 158 ~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~~~ 221 (691)
.+=-+++....+|+++|.+.+.+..+ .+| ..++.++..++.+++.++..|.|++
T Consensus 23 kaEr~~q~ilti~aiVg~i~Gf~~Qq--------ls~--tvy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 23 KAERFQQLILTIGAIVGFIYGFAQQQ--------LSV--TVYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHH--HHHHHHHHHHHHHHhcCCCchhhhc
Confidence 34446677888888888887766544 223 3334444445555555555555544
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=38.39 E-value=6.2e+02 Score=28.47 Aligned_cols=55 Identities=9% Similarity=0.071 Sum_probs=39.5
Q ss_pred ehhhHHHHHHHHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHh
Q psy195 591 LWLFPQYIIITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIV 645 (691)
Q Consensus 591 ~w~~pq~~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v 645 (691)
+|.+.-.++.|++.........-.+-+..+++.|..+..+..+...+|-.++..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556778888888777777777777888888888887777766666665544
No 290
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=36.74 E-value=3.1e+02 Score=24.56 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHH
Q psy195 56 EKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLT 106 (691)
Q Consensus 56 ~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~ 106 (691)
+..+|-+...+.....+.+++.+|..|+. -+-+-=.+|..++.+|..+..
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheE
Confidence 36678999999999999999999999997 776666778888777766543
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.78 E-value=1.2e+02 Score=27.13 Aligned_cols=31 Identities=13% Similarity=-0.123 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhHHHHHHHhHhcCchhHHHHH
Q psy195 63 FHIWTGLCYFFPLFGGIIADTYLGKFLTIVI 93 (691)
Q Consensus 63 ~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~i 93 (691)
.+.=.++..+.....||+.|+|.|-++--++
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 3444555556666788999999777764433
No 292
>PF12133 Sars6: Open reading frame 6 from SARS coronavirus; InterPro: IPR022736 This entry represents small proteins, typically between 42 to 63 amino acids in length, which are uncharacterised.
Probab=35.31 E-value=72 Score=24.62 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=29.2
Q ss_pred HHHHHHhHhhcchheeeecccCchhhhHHHHHHHHHHHHHHHHHHHHhhhh
Q psy195 598 IIITAAEIMFSITGFEFAFTQAPVSMKSAVSACWLLTTAFGNLIVAIVAEA 648 (691)
Q Consensus 598 ~~~~~~ei~~~~~~~ef~~~~aP~~mr~~~~a~~~~~~~~g~~i~~~v~~~ 648 (691)
+..++||++ -.-||+...|+|.+-..+.+++-.+..+.
T Consensus 7 fqvtiae~l-------------i~im~sf~~a~~~~~i~i~s~~~~l~~~l 44 (62)
T PF12133_consen 7 FQVTIAEIL-------------IIIMRSFRIAIWNIQIIISSIVRQLFNPL 44 (62)
T ss_pred hHhhHHHHH-------------HHHHHHHHHHHHhHHhHHHHHHHHHhccc
Confidence 456789999 67799999999999888877665554443
No 293
>PF12832 MFS_1_like: MFS_1 like family
Probab=34.14 E-value=1.4e+02 Score=24.85 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=21.9
Q ss_pred chhHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy195 319 PDQMQLINPLLILTFIPLFQYVIYPLVDKCG 349 (691)
Q Consensus 319 ~~~l~~in~i~iii~~pl~~~~l~p~l~R~~ 349 (691)
.+.+..+.+++-++..|+.+ .+.|..+|++
T Consensus 37 iGil~~i~~~~~~~~~pl~g-~laDk~~~~~ 66 (77)
T PF12832_consen 37 IGILSAIRPLIRFLAPPLWG-FLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHCccH
Confidence 56677888888888889888 5566666553
No 294
>KOG3810|consensus
Probab=31.31 E-value=3.7e+02 Score=29.67 Aligned_cols=96 Identities=11% Similarity=0.066 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhhchhhhh
Q psy195 60 TVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLLTVTAIDPLNIPKRTFTLVGLLLIAVGTGGIKPCV 139 (691)
Q Consensus 60 g~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill~~s~~~~~~~~~~~~l~i~~~l~gig~G~~~~~~ 139 (691)
|.+-.+..+.++++.+..|.+.-.+ .|..-++++..-...+.+++..+..... +..+++-++.........+..
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~t~~I-----w~~Ya~yvlfr~~y~l~itiA 347 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQTQHI-----WVCYAGYVLFRVIYQLTITIA 347 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhcccce-----ehhhhhHHHHHhhHhhhhhHH
Confidence 5666778888899999999998776 6654444443322333333333322222 667777777777777766666
Q ss_pred hhhhhccCCCcchhhhHHHHHHHHHH
Q psy195 140 SSFGGDQFIVPEQSAQLEKFFSLFYF 165 (691)
Q Consensus 140 ~~~~ad~fp~~~~~~~rg~~~~~~~~ 165 (691)
..-+|.-.. .+.-|-.||++.+
T Consensus 348 ~~~iA~nL~----~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 348 TFQIARNLS----SELFGLVFGINTF 369 (433)
T ss_pred HHHHHHhhh----hhhheeeeehHHH
Confidence 666666333 6666777776544
No 295
>PRK02237 hypothetical protein; Provisional
Probab=31.12 E-value=4e+02 Score=24.01 Aligned_cols=48 Identities=13% Similarity=-0.010 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHHHH
Q psy195 57 KTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNVLL 105 (691)
Q Consensus 57 ~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~ill 105 (691)
+.+|-+...+.....+.+++.+|+.|+. -.-+-=.+|..++.+|..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHh
Confidence 4589999999999999999999999997 66666667888877777554
No 296
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=30.78 E-value=3.3e+02 Score=23.34 Aligned_cols=48 Identities=15% Similarity=0.177 Sum_probs=26.0
Q ss_pred HHHhhchhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy195 129 AVGTGGIKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITPIFRH 183 (691)
Q Consensus 129 gig~G~~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~~l~~ 183 (691)
|+|--.+.|..|.++.|.-- +..+-+...+ ...+|.++|......+..
T Consensus 5 GigRFayTplLP~M~~~~~l---s~~~ag~las----aNy~GYL~GAl~~~~~~~ 52 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGL---SLSQAGWLAS----ANYLGYLVGALLASRLPR 52 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCC---CHHHHHHHHH----HHHHHHHHHHHHHHHHHh
Confidence 44444566788888877421 1333343444 455555666555555544
No 297
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=29.13 E-value=2.6e+02 Score=21.38 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=20.3
Q ss_pred HHHHHHHHhHHHHHHHhHhcCchhHHHHHH
Q psy195 65 IWTGLCYFFPLFGGIIADTYLGKFLTIVIL 94 (691)
Q Consensus 65 ~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig 94 (691)
....+..+.....|+..|+++|..+...+.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~ 37 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLI 37 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 444556666778888888887886655443
No 298
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=28.43 E-value=21 Score=38.01 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHhHHHHHHHhHhcCc-hhHHHHHHHHHHHHHHHHHHHhh-cCCC--CC---chhHHHHHHHHHHHHHhhc
Q psy195 62 MFHIWTGLCYFFPLFGGIIADTYLG-KFLTIVILSIVYLGGNVLLTVTA-IDPL--NI---PKRTFTLVGLLLIAVGTGG 134 (691)
Q Consensus 62 i~~~~~i~~~i~~l~~G~LaDr~lG-Rkk~i~ig~il~~ig~ill~~s~-~~~~--~~---~~~~~l~i~~~l~gig~G~ 134 (691)
...+|.++-.+|..+.++.- +-+ ++|.+.+..+.-++-.-++...+ .|.. .+ ++-+..++..++.|+..|-
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~--~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPR--WPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeE--ecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 45678888889988888752 311 23333333332222221111111 1110 00 0115667778889999999
Q ss_pred hhhhhhhhhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy195 135 IKPCVSSFGGDQFIVPEQSAQLEKFFSLFYFSINAGSLISTFITP 179 (691)
Q Consensus 135 ~~~~~~~~~ad~fp~~~~~~~rg~~~~~~~~~~nlG~~igp~i~~ 179 (691)
..+....+..+..+ +++|..+-.+..++.++|-.+|..++-
T Consensus 265 l~tl~m~~~p~~v~----~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVS----PEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH---------------------------------------
T ss_pred hhhceeeeCCCcCC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888888888665 667777777776777777777666543
No 299
>KOG2082|consensus
Probab=28.22 E-value=9.9e+02 Score=29.04 Aligned_cols=22 Identities=32% Similarity=0.214 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh
Q psy195 88 FLTIVILSIVYLGGNVLLTVTA 109 (691)
Q Consensus 88 kk~i~ig~il~~ig~ill~~s~ 109 (691)
-+++.+|.++..+|..++.+..
T Consensus 496 PwVi~IGsFlST~GAgLQsLtg 517 (1075)
T KOG2082|consen 496 PWVIVIGSFLSTCGAGLQSLTG 517 (1075)
T ss_pred ceeeehhHHHHHhHHHHhhhcC
Confidence 4688899999999998887653
No 300
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=27.01 E-value=8.7e+02 Score=26.64 Aligned_cols=153 Identities=12% Similarity=0.036 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHH-----HHHHHhHHHHHHHhHhcCc--hhHHH
Q psy195 22 AVFFIVINEFCERFCYYGMRTVLSLYMH---LVLLYDEKTATVMFHIWT-----GLCYFFPLFGGIIADTYLG--KFLTI 91 (691)
Q Consensus 22 ~~~~l~~~~~~~~~~~y~i~~~l~~yl~---~~lg~s~~~ag~i~~~~~-----i~~~i~~l~~G~LaDr~lG--Rkk~i 91 (691)
.++.+++...+...+.-...+.+=.++. ++.+++....+.+..... +..+++.+++-+++|.. | +....
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~-~~g~vaPF 198 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF-GFGPVAPF 198 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh-CCCCcchH
Confidence 3445555555544444333332222222 346777765554443222 33445555555666664 5 45566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCC----c---hh---H-HHHHH--H-HHHHHHhhchhhhhhhhhhccCCCcchh----
Q psy195 92 VILSIVYLGGNVLLTVTAIDPLNI----P---KR---T-FTLVG--L-LLIAVGTGGIKPCVSSFGGDQFIVPEQS---- 153 (691)
Q Consensus 92 ~ig~il~~ig~ill~~s~~~~~~~----~---~~---~-~l~i~--~-~l~gig~G~~~~~~~~~~ad~fp~~~~~---- 153 (691)
..+..+.+++.++....-..+... . .. . ..+.. | .++|+.+.++..+...++--|.|. -++
T Consensus 199 ~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPa-L~~~~~~ 277 (354)
T PF05631_consen 199 DAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPA-LDPDDEE 277 (354)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeece-ecCCCCC
Confidence 666666666655443321111111 0 00 1 11111 2 356888888999999999888873 222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q psy195 154 AQLEKFFSLFYFSINAGSLISTF 176 (691)
Q Consensus 154 ~~rg~~~~~~~~~~nlG~~igp~ 176 (691)
---|..++-+-.+.-+|+.+-+.
T Consensus 278 ~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 278 LPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred CCchHHHHHHHHHHHHHHHHHHH
Confidence 23577777776677777765543
No 301
>PRK10633 hypothetical protein; Provisional
Probab=26.66 E-value=1.7e+02 Score=24.86 Aligned_cols=22 Identities=5% Similarity=0.270 Sum_probs=11.0
Q ss_pred HHHHHHhhhccceecCCCcccc
Q psy195 668 DMGVFALLAMRYKYVEEDEDED 689 (691)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~ 689 (691)
..+.++..-.-+|..++||.++
T Consensus 58 i~l~~~~Vk~vFkDi~Ld~~~~ 79 (80)
T PRK10633 58 ILLCWLMVKFIFRDIPLEDDDA 79 (80)
T ss_pred HHHHHHHHHHHhcCCCCCCccC
Confidence 3333334445556666665443
No 302
>PF14344 DUF4397: Domain of unknown function (DUF4397)
Probab=25.77 E-value=76 Score=28.51 Aligned_cols=45 Identities=7% Similarity=-0.012 Sum_probs=35.5
Q ss_pred Ccccccccceeeee-ccCCc-ceeeeeecchhhhhhcccCcceeeeec
Q psy195 444 CPYVLNKTFQSSVL-GADGK-ITEYYLIRDEKQQAHLKRLGEFHDLRN 489 (691)
Q Consensus 444 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (691)
.++.++.++.++++ .+..+ ..++..+.| +...+..|+.++|++|-
T Consensus 65 ~~i~l~~g~~yTl~~~g~~~~~~~~~~~~D-~~~~~~~~~a~vRf~h~ 111 (122)
T PF14344_consen 65 TTITLEAGKSYTLFAVGTAAGNPSLLVIED-DLSPPPPGKARVRFIHL 111 (122)
T ss_pred ccEEEcCCCEEEEEEECCCCCCeeEEEEec-CCCCCCCCcEEEEEEEC
Confidence 67889999999998 54444 578888888 55567789999999975
No 303
>PRK03612 spermidine synthase; Provisional
Probab=24.11 E-value=1.1e+03 Score=27.04 Aligned_cols=23 Identities=17% Similarity=0.319 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy195 156 LEKFFSLFYFSINAGSLISTFIT 178 (691)
Q Consensus 156 rg~~~~~~~~~~nlG~~igp~i~ 178 (691)
.|+.++..+++..+|+++.+.+.
T Consensus 147 ~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 147 VATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred hhhhHhHHhHHHHHHHHHHHHHH
Confidence 45556666666666665554443
No 304
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=23.63 E-value=2.8e+02 Score=25.20 Aligned_cols=64 Identities=16% Similarity=0.113 Sum_probs=39.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhhh---cCCchHHHHHHHHHHHHHH----HHHHHhhhccceecCC
Q psy195 621 VSMKSAVSACWLLTTAFGNLIVAIVAEAK---IFENQAYEFLLFASLMVVD----MGVFALLAMRYKYVEE 684 (691)
Q Consensus 621 ~~mr~~~~a~~~~~~~~g~~i~~~v~~~~---~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~ 684 (691)
...|+++.|+.++..+..-++...+.... ....+.+-+++.++++++= ..+.+...+++++=+-
T Consensus 39 ~pwK~I~la~~Lli~G~~li~~g~l~~~~~i~~~~~~~~~llilG~L~fIPG~Y~~~i~y~a~rg~~Gysf 109 (115)
T PF05915_consen 39 IPWKSIALAVFLLIFGTVLIIIGLLLFFGHIDGDRDRGWALLILGILCFIPGFYHTRIAYYAWRGYKGYSF 109 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHHHHHHHHHhccHHHHHHHHHHHcCCCCCCH
Confidence 34899999999988877666544433222 2334566778888888763 3333444566665443
No 305
>PRK10263 DNA translocase FtsK; Provisional
Probab=23.52 E-value=4.2e+02 Score=34.11 Aligned_cols=16 Identities=13% Similarity=0.495 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHhhc
Q psy195 168 NAGSLISTFITPIFRH 183 (691)
Q Consensus 168 nlG~~igp~i~~~l~~ 183 (691)
..|+++|.+++..+..
T Consensus 141 ~gGGIIG~lLs~lL~~ 156 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQP 156 (1355)
T ss_pred cccchHHHHHHHHHHH
Confidence 3466666666665544
No 306
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=23.27 E-value=2.8e+02 Score=29.05 Aligned_cols=64 Identities=16% Similarity=0.213 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCchhHHHHHHHHHHHHHHHHHHhhcccc
Q psy195 154 AQLEKFFSLFYFSINAGSLISTFITPIFRHDMQCFGQEACFPLAFGVPALLMFLAIIVFIIGKPMY 219 (691)
Q Consensus 154 ~~rg~~~~~~~~~~nlG~~igp~i~~~l~~~~~~~g~~~~w~~~F~i~~~l~~l~~l~~~~~~~~~ 219 (691)
++|+....+..++.++|++++...-....+ .+... ...|+..+.+.+++.++-++++...-++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~-~~~~~-~~~W~~I~si~~lL~~IpLIly~ifGk~f 65 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSS-VVIAL-TNNWQWILSIFILLIFIPLILYIIFGKNF 65 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcch-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 345666667777888888876543211101 11111 34599888888877766666655544443
No 307
>PF06196 DUF997: Protein of unknown function (DUF997); InterPro: IPR010398 This is a family of predicted bacterial membrane protein with unknown function.
Probab=21.93 E-value=2.6e+02 Score=23.66 Aligned_cols=27 Identities=15% Similarity=0.333 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhhhccceecCCCcccc
Q psy195 663 SLMVVDMGVFALLAMRYKYVEEDEDED 689 (691)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (691)
+..+..+++++...+.+|..++||.|+
T Consensus 53 ~~il~~~l~~~~vk~~Fkd~~Ld~~~~ 79 (80)
T PF06196_consen 53 GPILFIILVWLMVKFFFKDIPLDDEEE 79 (80)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcccC
Confidence 334445555556667778887777665
No 308
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=21.87 E-value=7.9e+02 Score=25.81 Aligned_cols=95 Identities=12% Similarity=0.008 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhHHHHHHHhHhcCchhHHHH----HHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHhhchhh
Q psy195 63 FHIWTGLCYFFPLFGGIIADTYLGKFLTIV----ILSIVYLGGNVLLTVTAIDPLNIPKR-TFTLVGLLLIAVGTGGIKP 137 (691)
Q Consensus 63 ~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~----ig~il~~ig~ill~~s~~~~~~~~~~-~~l~i~~~l~gig~G~~~~ 137 (691)
..++..+..+++..-|..+-.-.-||+-+. .+.+++.++.+. ... -....... ..+++.-++.|+..=+.++
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~--~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYF--VGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHH--hCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344555566677777777665545665443 223333333332 111 11111111 5566666666655544443
Q ss_pred hhhhhhhccCCCcchhhhHHHHHHH
Q psy195 138 CVSSFGGDQFIVPEQSAQLEKFFSL 162 (691)
Q Consensus 138 ~~~~~~ad~fp~~~~~~~rg~~~~~ 162 (691)
+ .-.+-..++ .++|++.|..+|.
T Consensus 224 V-iL~lPhEyK-~~~pk~ig~~Fg~ 246 (267)
T PF07672_consen 224 V-ILNLPHEYK-GYNPKKIGIQFGL 246 (267)
T ss_pred H-HhcChhhhc-CCCcceehhHHHH
Confidence 3 233444555 5667777777775
No 309
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=21.87 E-value=5.2e+02 Score=23.14 Aligned_cols=48 Identities=13% Similarity=-0.016 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHhHhcCchhHHHHHHHHHHHHHHH
Q psy195 55 DEKTATVMFHIWTGLCYFFPLFGGIIADTYLGKFLTIVILSIVYLGGNV 103 (691)
Q Consensus 55 s~~~ag~i~~~~~i~~~i~~l~~G~LaDr~lGRkk~i~ig~il~~ig~i 103 (691)
+...+|-+...+.....+.+++.+++.|+. -.-+-=.+|..++.+|..
T Consensus 53 ~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~-~pdr~D~~Ga~icl~G~~ 100 (109)
T COG1742 53 PAAAFGRVYAAYGGVYIAASLAWLWVVDGV-RPDRYDWIGAAICLAGVA 100 (109)
T ss_pred CchhhhhHHHHhcchHHHHHHHHHHHHcCc-CCcHHHhhhHHHHHhcee
Confidence 445567888888888889999999999986 544444556666666644
No 310
>PF12676 DUF3796: Protein of unknown function (DUF3796); InterPro: IPR024257 This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.
Probab=21.00 E-value=3.4e+02 Score=24.75 Aligned_cols=39 Identities=33% Similarity=0.516 Sum_probs=24.1
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHhhhccceecCCCcccc
Q psy195 650 IFENQAYEFLLFASLMVVDMGVFALLAMRYKYVEEDEDED 689 (691)
Q Consensus 650 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (691)
+.++......+.+..-.+.+++|.+-..-|++++.+ .||
T Consensus 79 i~~~~~~~~~~i~i~~~i~l~vf~~~~~~ye~~e~~-~~~ 117 (118)
T PF12676_consen 79 IFDNLELITILIAIAFAIALLVFAISYLYYEYREDK-MED 117 (118)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh-hcc
Confidence 344444455566666666777777776677766655 665
Done!